BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006955
(624 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359477774|ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 691
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/619 (65%), Positives = 500/619 (80%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MRN +EAQ LFD+MPQR+TVT+N MIRGYF+NG + LF++MPERD+F+YNT+IA
Sbjct: 52 MRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPERDIFSYNTMIA 111
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
GLM+ ++ GA E+F M RDVV+WNSMISGYV NGLI EALRVF GM LKDVVSWNLV
Sbjct: 112 GLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGMVLKDVVSWNLV 171
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I LV ++DLAE +FKEMG RD+ASWT M++GL GRIVEAR LF+ MP +DV+AWN
Sbjct: 172 IAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVEARGLFEDMPVRDVRAWN 231
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MIAGY++NGC+ + E LFQKM RD SW ++INGLV ++RI A+ F +MP+ C ++
Sbjct: 232 TMIAGYIENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRIQDAMRLFVEMPQKCRRS 291
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WNSI+ LIRNGL+KEAH++LEK P+S+ SWTN+IVGYFE GEV +A+ +FELM RD
Sbjct: 292 WNSIVFGLIRNGLIKEAHAFLEKSPFSDTVSWTNLIVGYFETGEVDTAVSIFELMPARDA 351
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
T WNV+I+GLGEND GEEGLKFFV+MKE GP PD ATFTSVLTICSDLPTL LGRQIHAQ
Sbjct: 352 TAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEATFTSVLTICSDLPTLHLGRQIHAQ 411
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
K N F VSNAM+T+YARCGN SALL FS++ HD ISWNSIICGLA++G +A
Sbjct: 412 VTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFSAMRSHDFISWNSIICGLAHNGNGVEA 471
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
+E+FE+MR D KP+ ITFVGVLSACS+AGLVDQG+YYFD MK K L+P HYTC+VD
Sbjct: 472 IEVFEKMRSIDIKPNHITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVD 531
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGRFGLIDEAM+ L ++ A+G+EV +VWGA+LGACRIH N++VGEIAGER++E+EP+N
Sbjct: 532 LLGRFGLIDEAMSFLRQMEANGVEVPASVWGAVLGACRIHKNMQVGEIAGERILEIEPHN 591
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
SGVY+IL EMYLS G+REDA+R++ +M+E GVKK+P CSW+++N GHVFLSGDSSHP+F
Sbjct: 592 SGVYIILAEMYLSSGKREDAERVWVRMREKGVKKQPACSWMEVNGSGHVFLSGDSSHPQF 651
Query: 601 HRLRYLLNLLHTEIEREIL 619
R+ +L LLH E+E IL
Sbjct: 652 SRVCGVLGLLHMEMEIGIL 670
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 143/490 (29%), Positives = 237/490 (48%), Gaps = 52/490 (10%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
N+ I+ M++ + A+ +FD M R+ VT+N+MI GY NG E + +F MP +D+
Sbjct: 45 NSRISDCMRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPERDIF 104
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
S+N +I L+ ++ A F++M RDV SW M++G V G I EA ++F M KD
Sbjct: 105 SYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGMVLKD 164
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
V +WNL+IAG + G V +AE+ F++M RD+ SW +I+GL ++ RI A F+ MP
Sbjct: 165 VVSWNLVIAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVEARGLFEDMPV 224
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
+ WN++I+ I NG ++ +K P + SW +I G + A+++F M
Sbjct: 225 RDVRAWNTMIAGYIENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRIQDAMRLFVEM 284
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+ WN ++FGL N L +E F E P D ++T+
Sbjct: 285 PQKCRRSWNSIVFGLIRNGLIKEAHAFL----EKSPFSDTVSWTN--------------- 325
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+I Y G + +A+ F +P D +WN II GL +
Sbjct: 326 --------------------LIVGYFETGEVDTAVSIFELMPARDATAWNVIIWGLGEND 365
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN---KYFLQPRS 472
+ E+ L+ F +M+ PD+ TF VL+ CS + GR + YF+ +
Sbjct: 366 HGEEGLKFFVKMKEGGPFPDEATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSN 425
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL-GACRIHNNIKVGEIAGE 531
A +V L R G + A+ L + +R+ W +++ G N ++ E+ +
Sbjct: 426 A----MVTLYARCGNSNSALLLFSAMRSHDF----ISWNSIICGLAHNGNGVEAIEVFEK 477
Query: 532 -RVMELEPNN 540
R ++++PN+
Sbjct: 478 MRSIDIKPNH 487
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 43/224 (19%)
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
K NS IS +RNG +EA ++ P N ++ +I GYF+ G G + +F+ M R
Sbjct: 42 KPLNSRISDCMRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPER 101
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
D+ +N MI GL +KF I +P D+
Sbjct: 102 DIFSYNTMIAGL---------MKF-------------GDINGASEIFQKMPFRDV----- 134
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
N+MI+ Y G I AL FS + + D++SWN +I GL G +
Sbjct: 135 ------------VSWNSMISGYVSNGLIGEALRVFSGMVLKDVVSWNLVIAGLVGVGKVD 182
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
A E F+ M D ++ ++S + AG + + R F+ M
Sbjct: 183 LAEEFFKEMGTRDIA----SWTTMISGLASAGRIVEARGLFEDM 222
>gi|147859671|emb|CAN83112.1| hypothetical protein VITISV_026574 [Vitis vinifera]
Length = 833
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/619 (64%), Positives = 491/619 (79%), Gaps = 12/619 (1%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MRN +EAQ LFD+MPQR+TVT+N MIRGYF+NG + LF++MPERD+F+YNT+IA
Sbjct: 206 MRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPERDIFSYNTMIA 265
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
GLM+ ++ GA E+F M RDVV+WNSMISGYV NGLI EALRVF GM LKDVVSWNLV
Sbjct: 266 GLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGMVLKDVVSWNLV 325
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I LV ++DLAE +FKEMG RD+ASWT M++GL GRIVEAR LF+ MP +DV+AWN
Sbjct: 326 IAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVEARGLFEDMPVRDVRAWN 385
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MIAGYL+NGC+ + E LFQKM RD SW ++INGLV ++RI A+ F +MP+ C ++
Sbjct: 386 TMIAGYLENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRIQNAMRLFVEMPQKCRRS 445
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WNSI+ LIRNGL+KEAH++LEK P+S+ SWTN+IVGYFE GEV +A+ +FELM RD
Sbjct: 446 WNSIVFGLIRNGLIKEAHAFLEKSPFSDTVSWTNLIVGYFETGEVDTAVSIFELMPARDA 505
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
T WNV+I+GLGEND GEEGLKFFV+MKE GP PD ATFTSVLTICSDLPTL LGRQIHAQ
Sbjct: 506 TAWNVIIWGLGENDHGEEGLKFFVKMKEGGPFPDEATFTSVLTICSDLPTLHLGRQIHAQ 565
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
K N F VSNAM+T+YARCGN SALL FSS+ HD+ISWNSIICGLA++G +A
Sbjct: 566 VTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFSSMTSHDVISWNSIICGLAHNGNGVEA 625
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
+E+FE+MR TD KP+ ITFVGVLSACS+AGLVDQG+YYFD MK K L+P HYTC+VD
Sbjct: 626 IEMFEKMRSTDIKPNRITFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVD 685
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGRFGLIDEAM+ L ++ A+G+EV +VWGA+LGACRIH NI+VGEIAGER++E+EP+N
Sbjct: 686 LLGRFGLIDEAMSFLRQMEANGVEVPASVWGAVLGACRIHKNIQVGEIAGERILEIEPHN 745
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
CG+REDA+R++ +M+E GVKK+P CSW+++N GHVFLSGDSSHP+F
Sbjct: 746 ------------FCGKREDAERVWVRMREKGVKKQPACSWMEVNGSGHVFLSGDSSHPQF 793
Query: 601 HRLRYLLNLLHTEIEREIL 619
R+ +L LLH E+E IL
Sbjct: 794 SRVCGVLGLLHMEMEIGIL 812
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 43/224 (19%)
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
K NS IS +RNG +EA ++ P N ++ +I GYF+ G G + +F+ M R
Sbjct: 196 KPLNSRISDCMRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPER 255
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
D+ +N MI GL +KF I +P D+
Sbjct: 256 DIFSYNTMIAGL---------MKF-------------GDINGASEIFQKMPFRDV----- 288
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
N+MI+ Y G I AL FS + + D++SWN +I GL G +
Sbjct: 289 ------------VSWNSMISGYVSNGLIGEALRVFSGMVLKDVVSWNLVIAGLVGVGKVD 336
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
A E F+ M D ++ ++S + AG + + R F+ M
Sbjct: 337 LAEEFFKEMGTRDIA----SWTTMISGLASAGRIVEARGLFEDM 376
>gi|449433223|ref|XP_004134397.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
gi|449487596|ref|XP_004157705.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 675
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/614 (60%), Positives = 477/614 (77%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MRN +++AQ LFD MPQR+ VTWN MIRGYF NG + + LF +MPERD+F+YNTVI
Sbjct: 57 MRNGLVEQAQKLFDGMPQRNIVTWNAMIRGYFLNGRCSDGISLFRRMPERDVFSYNTVIG 116
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
GLMQ +V GAK++FD M RDVV+WNSMI+G + NGL++EA+++F GMPLK+V+SWNL+
Sbjct: 117 GLMQCGDVDGAKDIFDLMPFRDVVSWNSMIAGCIRNGLLEEAIQLFDGMPLKNVISWNLI 176
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
IG LVNC ++D A YF +M RD+ SWTIM++GL R GR+ EAR LF+ MP KD + WN
Sbjct: 177 IGGLVNCGKLDSAGEYFGKMSRRDLVSWTIMISGLCRAGRLDEARGLFNNMPTKDARVWN 236
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
M+ GY++NG + +AE+LF M +R+ SW +L+NG V S+R+D A F +MP+ C+KT
Sbjct: 237 AMMVGYIENGKIEMAEELFGIMPERNFGSWNKLVNGFVGSQRVDDARKLFMEMPDKCQKT 296
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WN+I+ IRNGLV + H+ LEK PY NIASWTN+IVGYF +GEVG A+++FE M +D
Sbjct: 297 WNNIVLAYIRNGLVLQTHALLEKIPYGNIASWTNLIVGYFGIGEVGMAVEIFESMQYKDT 356
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
TVWN IFGLGEND GEEGLK F +M GP D ATFTS+LTICSDL TL LGRQ HA
Sbjct: 357 TVWNATIFGLGENDKGEEGLKLFTRMIRLGPCLDKATFTSILTICSDLETLQLGRQTHAL 416
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
+K N F VSNAMI MYARCGN+ A +EFSS+ D+ISWNS+ICG A+HG E A
Sbjct: 417 ILKEGFNGFVAVSNAMINMYARCGNMDCAFMEFSSMSDRDVISWNSMICGFAHHGNGEDA 476
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
LE+FE+MRL + +P+ ITF+GVLSACS+ GL+D+GRYYF+ MKN+ L+P HYTC+VD
Sbjct: 477 LEMFEKMRLANIEPNHITFIGVLSACSHKGLIDKGRYYFNFMKNECSLRPLIEHYTCLVD 536
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
L GRFGLIDEA++ L E++A+ IEV P+VWGALLGACRIH N VG IAGE+V+E EP+N
Sbjct: 537 LFGRFGLIDEALSFLAEMKAEEIEVPPSVWGALLGACRIHKNYDVGVIAGEKVLEKEPHN 596
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
+GVYLIL EMYL G+RE+A++IFA+MK NGVKK+PGCSWI++N+ G+VFLSGD S+P F
Sbjct: 597 AGVYLILAEMYLRNGKRENAEKIFARMKNNGVKKQPGCSWIEVNNCGYVFLSGDCSNPHF 656
Query: 601 HRLRYLLNLLHTEI 614
R+ ++ L++ EI
Sbjct: 657 DRICSVVKLVNLEI 670
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 97/227 (42%), Gaps = 43/227 (18%)
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
K NS IS +RNGLV++A + P NI +W +I GYF G I +F M R
Sbjct: 47 KLLNSEISNCMRNGLVEQAQKLFDGMPQRNIVTWNAMIRGYFLNGRCSDGISLFRRMPER 106
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
DV +N +I GL +Q + + D I +P D+
Sbjct: 107 DVFSYNTVIGGL-------------MQCGDVDGAKD---------IFDLMPFRDV----- 139
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
N+MI R G ++ A+ F +P+ ++ISWN II GL G +
Sbjct: 140 ------------VSWNSMIAGCIRNGLLEEAIQLFDGMPLKNVISWNLIIGGLVNCGKLD 187
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNK 465
A E F +M D +++ ++S AG +D+ R F+ M K
Sbjct: 188 SAGEYFGKMSRRDL----VSWTIMISGLCRAGRLDEARGLFNNMPTK 230
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 125/304 (41%), Gaps = 55/304 (18%)
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
+ N+ + I G V A K+F+ M R++ WN MI G N +G+ F +
Sbjct: 43 FPNLKLLNSEISNCMRNGLVEQAQKLFDGMPQRNIVTWNAMIRGYFLNGRCSDGISLFRR 102
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M E R+ F+ N +I +CG+
Sbjct: 103 MPE-------------------------------------RDVFSY--NTVIGGLMQCGD 123
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+ A F +P D++SWNS+I G +G E+A++LF+ M L + ++ G+++
Sbjct: 124 VDGAKDIFDLMPFRDVVSWNSMIAGCIRNGLLEEAIQLFDGMPLKNVISWNLIIGGLVN- 182
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
G +D YF M + + +T ++ L R G +DEA L N +
Sbjct: 183 ---CGKLDSAGEYFGKMSRRDLVS-----WTIMISGLCRAGRLDEARGLFNNMPTK---- 230
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
VW A++ + I E+A E + N G + L ++ R +DA+++F
Sbjct: 231 DARVWNAMMVGYIENGKI---EMAEELFGIMPERNFGSWNKLVNGFVGSQRVDDARKLFM 287
Query: 566 QMKE 569
+M +
Sbjct: 288 EMPD 291
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/617 (39%), Positives = 376/617 (60%), Gaps = 3/617 (0%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MRN + A LF+ MP+R +++WN MI G N A LF +MP RD+ ++N +I+
Sbjct: 60 MRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMIS 119
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ N++ A+ +FD M RDVV+WN+M+SGY NG + EA +F MP K+ +SWN +
Sbjct: 120 GCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGM 179
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A V R++ A F+ ++ SW M+ G V+ R+V+AR +FD+MP +D +WN
Sbjct: 180 LAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWN 239
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MI+GY NG + A+ LF++ RD+ +W +++G V + +D A F MPE +
Sbjct: 240 TMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVS 299
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WN+II+ ++ + +A E P N++SW +I GY + G++ A F+ M RD
Sbjct: 300 WNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDS 359
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W +I G ++ GEE L FV+MK G + +TFTS L+ C+++ L+LG+Q+H +
Sbjct: 360 ISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGR 419
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
+K V NA++ MY +CGNI A + F + +++SWN++I G A HG+ ++A
Sbjct: 420 VVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEA 479
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L LFE M+ T PDD+T VGVLSACS+ GLVD+G YF M Y + S HYTC++D
Sbjct: 480 LMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMID 539
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR G +D+A NL+ + E WGALLGA RIH N ++GE A + + E+EP+N
Sbjct: 540 LLGRAGRLDDAQNLMKNM---PFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDN 596
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
SG+Y++L+ +Y + GR D R+ +M++ GVKK PG SW+++ + H F GDS HP+
Sbjct: 597 SGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPER 656
Query: 601 HRLRYLLNLLHTEIERE 617
R+ L L ++++E
Sbjct: 657 DRIYTFLEELDLKMKKE 673
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 31/217 (14%)
Query: 366 RNQFTTVS-----------NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
RNQ T S N IT + R G SAL F+S+P ISWN++I G +
Sbjct: 34 RNQPKTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSN 93
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
A +LFE+M D +++ ++S C + R FD M + +
Sbjct: 94 DKFYLARQLFEKMPTRDL----VSWNVMISGCVRYRNLRAARLLFDQMPERDVVS----- 144
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA-GERV 533
+ ++ + G + EA + +E+ + W +L A ++ G I R+
Sbjct: 145 WNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAA-----YVQNGRIEDARRL 195
Query: 534 MELEPNNSGV-YLILTEMYLSCGRREDAKRIFAQMKE 569
E + + + + + Y+ R DA+ IF +M E
Sbjct: 196 FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPE 232
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/617 (40%), Positives = 384/617 (62%), Gaps = 3/617 (0%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MRN A ++F+ MP+R +V++N MI GY +N + A LF+QMPERD+F++N ++
Sbjct: 60 MRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLT 119
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +++ + A+ +FD M +DVV+WNS++SGY NG +DEA VF MP K+ +SWN +
Sbjct: 120 GYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGL 179
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A V+ R++ A F+ D+ SW ++ G VR+ ++ +AR LFDKMP +D +WN
Sbjct: 180 LAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN 239
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MI+GY G + A LF + RD+ +W +++G V + +D A ++F +MPE E +
Sbjct: 240 TMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVS 299
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
+N++I+ ++ + A E P NI+SW +I GY ++G++ A K F++M RD
Sbjct: 300 YNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDC 359
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W +I G ++ EE L FV++K+ G S + ATF L+ C+D+ L+LG+QIH Q
Sbjct: 360 VSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQ 419
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
A+K+ V NA++ MY +CG+I A F + D++SWN+++ G A HG+ +A
Sbjct: 420 AVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQA 479
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L +FE M+ KPD+IT VGVLSACS+ GL+D+G YF M Y + P S HYTC++D
Sbjct: 480 LTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMID 539
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR G ++EA +L IR + WGALLGA RIH N ++GE A E V ++EP N
Sbjct: 540 LLGRAGRLEEAQDL---IRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQN 596
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
SG+Y++L+ +Y + GR DA ++ ++M++ GV+K PG SW+++ + H F GD SHP+
Sbjct: 597 SGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEK 656
Query: 601 HRLRYLLNLLHTEIERE 617
R+ L L ++ E
Sbjct: 657 ERIYAYLEELDLKMREE 673
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 197/375 (52%), Gaps = 8/375 (2%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
D++ WN IS ++ NG D AL VF+ MP + VS+N +I + + +LA + F +M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
RD+ SW +M+ G VR R+ +AR+LFD MP KDV +WN +++GY NG V A ++F
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M +++ SW L+ V++ RI+ A F+ + +WN ++ +R + +A
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLF 227
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
+K P + SW +I GY + G + A ++F+ TRDV W M+ G +N + +E
Sbjct: 228 DKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKT 287
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
FF +M P + ++ +++ +D+ R++ RN + N MIT Y
Sbjct: 288 FFDEM----PEKNEVSYNAMIAGYVQTKKMDIARELFESM--PCRN--ISSWNTMITGYG 339
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+ G+I A F +P D +SW +II G A G+ E+AL +F ++ + TF
Sbjct: 340 QIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGC 399
Query: 442 VLSACSYAGLVDQGR 456
LS C+ ++ G+
Sbjct: 400 ALSTCADIAALELGK 414
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 41/146 (28%)
Query: 448 YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
Y GL+D G YF M +Y + P S HYTC++DLLGR ++E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
GALLGA RIH N ++GE A + ++ P NSG+ ++M
Sbjct: 819 ---GALLGASRIHGNTELGEKAAQMFFKMGPQNSGI---------------------SKM 854
Query: 568 KENGVKKEPGCSWIQINDGGHVFLSG 593
++ GV+K PG SW ++ + H F G
Sbjct: 855 RDVGVQKVPGYSWFEVQNKIHTFSVG 880
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/617 (40%), Positives = 384/617 (62%), Gaps = 3/617 (0%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MRN A ++F+ MP+R +V++N MI GY +N + A LF+QMPERD+F++N ++
Sbjct: 60 MRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLT 119
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +++ + A+ +FD M +DVV+WNS++SGY NG +DEA VF MP K+ +SWN +
Sbjct: 120 GYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGL 179
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A V+ R++ A F+ D+ SW ++ G VR+ ++ +AR LFDKMP +D +WN
Sbjct: 180 LAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN 239
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MI+GY G + A LF + RD+ +W +++G V + +D A ++F +MPE E +
Sbjct: 240 TMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVS 299
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
+N++I+ ++ + A E P NI+SW +I GY ++G++ A K F++M RD
Sbjct: 300 YNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDC 359
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W +I G ++ EE L FV++K+ G S + ATF L+ C+D+ L+LG+QIH Q
Sbjct: 360 VSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQ 419
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
A+K+ V NA++ MY +CG+I A F + D++SWN+++ G A HG+ +A
Sbjct: 420 AVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQA 479
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L +FE M+ KPD+IT VGVLSACS+ GL+D+G YF M Y + P S HYTC++D
Sbjct: 480 LTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMID 539
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR G ++EA +L IR + WGALLGA RIH N ++GE A E V ++EP N
Sbjct: 540 LLGRAGRLEEAQDL---IRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQN 596
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
SG+Y++L+ +Y + GR DA ++ ++M++ GV+K PG SW+++ + H F GD SHP+
Sbjct: 597 SGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEK 656
Query: 601 HRLRYLLNLLHTEIERE 617
R+ L L ++ E
Sbjct: 657 ERIYAYLEELDLKMREE 673
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 197/375 (52%), Gaps = 8/375 (2%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
D++ WN IS ++ NG D AL VF+ MP + VS+N +I + + +LA + F +M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
RD+ SW +M+ G VR R+ +AR+LFD MP KDV +WN +++GY NG V A ++F
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M +++ SW L+ V++ RI+ A F+ + +WN ++ +R + +A
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLF 227
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
+K P + SW +I GY + G + A ++F+ TRDV W M+ G +N + +E
Sbjct: 228 DKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKT 287
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
FF +M P + ++ +++ +D+ R++ RN + N MIT Y
Sbjct: 288 FFDEM----PEKNEVSYNAMIAGYVQTKKMDIARELFESM--PCRN--ISSWNTMITGYG 339
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+ G+I A F +P D +SW +II G A G+ E+AL +F ++ + TF
Sbjct: 340 QIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGC 399
Query: 442 VLSACSYAGLVDQGR 456
LS C+ ++ G+
Sbjct: 400 ALSTCADIAALELGK 414
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 233/617 (37%), Positives = 385/617 (62%), Gaps = 4/617 (0%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MR + + A ++F+ M +R TVT+N MI GY N D A +F +MP+RD+ ++N +++
Sbjct: 71 MRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLS 130
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +++ N+ A+ +F+ M +DVV+WN+M+SG+ NG ++EA ++F M +K+ +SWN +
Sbjct: 131 GYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGL 190
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A V R++ A F ++ SW ++ G VR+ R+ +AR LFD+MP +D +WN
Sbjct: 191 LSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWN 250
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
+MI GY NG + A LF+++ RD+ +W +++G V + +D A F++MPE E +
Sbjct: 251 IMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS 310
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WN++I+ +++ +++A ++ P N +SW ++ GY + G + A +F+ M RD
Sbjct: 311 WNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDC 370
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W MI G ++ EE L F++MK G + + L+ C+++ L+LG+Q+H +
Sbjct: 371 ISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGR 430
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
+K NA++ MY +CG+I+ A F + DI+SWN++I G A HG+ ++A
Sbjct: 431 LVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEA 490
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L LFE M++T KPDD+T VGVLSACS+ GLVD+G YF+ M Y + + HYTC++D
Sbjct: 491 LALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMID 549
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR G +DEA+NL+ + WGALLGA RIH + ++GE A E+V E+EP+N
Sbjct: 550 LLGRAGRLDEALNLMKSM---PFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDN 606
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
SG+Y++L+ +Y + GR + + + ++M++ GVKK PG SW++I + H+F GD SHP+
Sbjct: 607 SGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEA 666
Query: 601 HRLRYLLNLLHTEIERE 617
R+ L L E++++
Sbjct: 667 ERIYAYLEELDLELKKD 683
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 232/617 (37%), Positives = 384/617 (62%), Gaps = 4/617 (0%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MR + + A ++F+ M +R TVT+N MI GY N D A +F +MP+RD+ ++N +++
Sbjct: 71 MRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLS 130
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +++ N+ A+ +F+ M +DVV+WN+M+SG+ NG ++EA ++F M +K+ +SWN +
Sbjct: 131 GYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGL 190
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A V R++ A F ++ SW ++ G VR+ R+ +AR LFD+MP +D +WN
Sbjct: 191 LSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWN 250
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
+MI GY NG + A LF+++ RD+ +W +++G V + +D A F++MPE E +
Sbjct: 251 IMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS 310
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WN++I+ +++ +++A ++ P N +SW ++ GY + G + A +F+ M RD
Sbjct: 311 WNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDC 370
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W MI G ++ EE L F++MK G + + L+ C+++ L+LG+Q+H +
Sbjct: 371 ISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGR 430
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
+K NA++ MY +CG+I+ A F + DI+SWN++I G A HG+ ++A
Sbjct: 431 LVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEA 490
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L LFE M++T KPDD+T VGVLSACS+ G VD+G YF+ M Y + + HYTC++D
Sbjct: 491 LALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMID 549
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR G +DEA+NL+ + WGALLGA RIH + ++GE A E+V E+EP+N
Sbjct: 550 LLGRAGRLDEALNLMKSM---PFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDN 606
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
SG+Y++L+ +Y + GR + + + ++M++ GVKK PG SW++I + H+F GD SHP+
Sbjct: 607 SGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEA 666
Query: 601 HRLRYLLNLLHTEIERE 617
R+ L L E++++
Sbjct: 667 ERIYAYLEELDLELKKD 683
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/617 (39%), Positives = 378/617 (61%), Gaps = 3/617 (0%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MRN A +F+ MP+R +V++N MI GY +N A LF++MPERD+F++N ++
Sbjct: 57 MRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLT 116
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +++ + A ++FD M +DVV+WN+M+SGY NG +DEA VF+ MP ++ +SWN +
Sbjct: 117 GYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGL 176
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A V+ R+ A F+ ++ SW ++ G V+ + +AR+LFD+MP +DV +WN
Sbjct: 177 LAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWN 236
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MI+GY G + A+ LF + RD+ +W +++G V + +D A YF +MP E +
Sbjct: 237 TMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEIS 296
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
+N++++ ++ + A E P NI+SW +I GY + G + A K+F++M RD
Sbjct: 297 YNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDC 356
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W +I G +N EE L FV+MK G S + +TF+ L+ C+D+ L+LG+Q+H Q
Sbjct: 357 VSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQ 416
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
+K V NA++ MY +CG+ A F + D++SWN++I G A HG+ +A
Sbjct: 417 VVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQA 476
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L LFE M+ KPD+IT VGVLSACS++GL+D+G YF M Y ++P S HYTC++D
Sbjct: 477 LVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMID 536
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR G ++EA NL+ + D S WGALLGA RIH N ++GE A E V ++EP N
Sbjct: 537 LLGRAGRLEEAENLMRNMPFDPGAAS---WGALLGASRIHGNTELGEKAAEMVFKMEPQN 593
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
SG+Y++L+ +Y + GR D ++ ++M+E GV+K G SW+++ + H F GD HP+
Sbjct: 594 SGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEK 653
Query: 601 HRLRYLLNLLHTEIERE 617
R+ L L ++ RE
Sbjct: 654 DRIYAFLEELDLKMRRE 670
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
N I+ + R G+ SAL F+S+P +S+N++I G + A +LF++M D
Sbjct: 50 NKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLF 109
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
++ G + + + FD M K + + ++ + G +DEA
Sbjct: 110 SWNVMLTGYVRNRR----LGEAHKLFDLMPKKDVVS-----WNAMLSGYAQNGFVDEARE 160
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHN 521
+ N++ + W LL A +HN
Sbjct: 161 VFNKM----PHRNSISWNGLLAA-YVHN 183
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/599 (39%), Positives = 366/599 (61%), Gaps = 3/599 (0%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MR R EA +F +MP+ +V++N MI GY +NG + A LF++MPERD+ ++N +I
Sbjct: 70 MRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIK 129
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +++ N+ A+E+F+ M RDV +WN+++SGY NG +D+A RVF MP K+ VSWN +
Sbjct: 130 GYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNAL 189
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A V +++ A F + SW ++ G V++ +IVEAR+ FD M +DV +WN
Sbjct: 190 LSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWN 249
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
+I GY NG + A LF + D+ +W +++G + +R ++ A F +MPE E +
Sbjct: 250 TIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVS 309
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WN++++ ++ V+ A + P N+++W +I GY + G++ A +F+ M RD
Sbjct: 310 WNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 369
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W MI G ++ E L+ FV M+ G + ++F+S L+ C+D+ L+LG+Q+H +
Sbjct: 370 VSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 429
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
+K V NA++ MY +CG+I+ A F + DI+SWN++I G + HG+ E+A
Sbjct: 430 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEA 489
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L FE M+ KPDD T V VLSACS+ GLVD+GR YF M Y ++P S HY C+VD
Sbjct: 490 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVD 549
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR GL++EA NL+ + E +WG LLGA R+H N ++ E A +++ +EP N
Sbjct: 550 LLGRAGLLEEAHNLMKNM---PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPEN 606
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
SG+Y++L+ +Y S GR D ++ +M++ GVKK PG SWI+I + H F GD HP+
Sbjct: 607 SGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPE 665
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 217/466 (46%), Gaps = 38/466 (8%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
D+ WN IS Y+ G EALRVF MP VS+N +I + +LA F EM
Sbjct: 58 DIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMP 117
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
RD+ SW +M+ G VR + +AR+LF++MP +DV +WN +++GY NGCV A +F +
Sbjct: 118 ERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDR 177
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M +++ SW L++ V + +++ A F +WN ++ ++ + EA +
Sbjct: 178 MPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFF 237
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
+ ++ SW +I GY + GE+ A ++F+ DV W M+ G +N + EE +
Sbjct: 238 DSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARE 297
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F +M P + ++ ++L +++ +++ + RN + N MIT YA
Sbjct: 298 LFDRM----PERNEVSWNAMLAGYVQGERVEMAKELF--DVMPCRN--VSTWNTMITGYA 349
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CG I A F +P D +SW ++I G + G++ +AL LF M + + +F
Sbjct: 350 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSS 409
Query: 442 VLSACS----------YAGLVDQGRYYFDCM-----------------KNKYFLQPRS-- 472
LS C+ G + +G Y C N F +
Sbjct: 410 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 469
Query: 473 -AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ ++ R G +EA+ ++ +G++ A+L AC
Sbjct: 470 IVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSAC 515
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 152/339 (44%), Gaps = 36/339 (10%)
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
K D D+ W I+ + + R A+ FK+MP ++N++IS +RNG + A
Sbjct: 53 KSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARML 112
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
++ P ++ SW +I GY +G A ++FE M RDV WN ++ G +N ++
Sbjct: 113 FDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDAR 172
Query: 321 KFFVQMKESGPSPDNATFTSVLT------ICSDLPTLD----------LGRQIHAQAIKI 364
+ F +M E NA ++ + C + + LG + + I
Sbjct: 173 RVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVE 232
Query: 365 ARNQFTTVS-------NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
AR F ++ N +IT YA+ G I A F P+HD+ +W +++ G +
Sbjct: 233 ARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMV 292
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
E+A ELF+RM + +++++ +L+ V+ + FD M + + +
Sbjct: 293 EEARELFDRMP----ERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNV-----STWNT 343
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
++ + G I EA NL +++ + P W A++
Sbjct: 344 MITGYAQCGKISEAKNLFDKM----PKRDPVSWAAMIAG 378
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/599 (39%), Positives = 366/599 (61%), Gaps = 3/599 (0%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MR R EA +F +MP+ +V++N MI GY +NG + A LF++MPERD+ ++N +I
Sbjct: 75 MRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIK 134
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +++ N+ A+E+F+ M RDV +WN+M+SGY NG +D+A VF MP K+ VSWN +
Sbjct: 135 GYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A V +M+ A FK + SW ++ G V++ +IVEAR+ FD M +DV +WN
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWN 254
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
+I GY +G + A LF + +D+ +W +++G + +R ++ A F +MPE E +
Sbjct: 255 TIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS 314
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WN++++ ++ ++ A + P N+++W +I GY + G++ A +F+ M RD
Sbjct: 315 WNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W MI G ++ E L+ FVQM+ G + ++F+S L+ C+D+ L+LG+Q+H +
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
+K V NA++ MY +CG+I+ A F + DI+SWN++I G + HG+ E A
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L FE M+ KPDD T V VLSACS+ GLVD+GR YF M Y + P S HY C+VD
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVD 554
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR GL+++A NL+ + E +WG LLGA R+H N ++ E A +++ +EP N
Sbjct: 555 LLGRAGLLEDAHNLMKNM---PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPEN 611
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
SG+Y++L+ +Y S GR D ++ +M++ GVKK PG SWI+I + H F GD HP+
Sbjct: 612 SGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPE 670
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/617 (38%), Positives = 368/617 (59%), Gaps = 3/617 (0%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MRN A +FD MP R++V++N MI GY +N A LF++MP +D+F++N ++
Sbjct: 44 MRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLT 103
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ ++ A+ +FD M +DVV+WN+M+SGYV +G +DEA VF MP K+ +SWN +
Sbjct: 104 GYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGL 163
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A V R++ A F+ ++ S ++ G V+ + +AR+LFD++P +D+ +WN
Sbjct: 164 LAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWN 223
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MI+GY +G + A LF++ RD+ +W ++ V +D A F +MP+ E +
Sbjct: 224 TMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMS 283
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
+N +I+ + + E+ P+ NI SW +I GY + G++ A +F++M RD
Sbjct: 284 YNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDS 343
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W +I G +N L EE + V+MK G S + +TF L+ C+D+ L+LG+Q+H Q
Sbjct: 344 VSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQ 403
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
++ + V NA++ MY +CG I A F V DI+SWN+++ G A HG+ +A
Sbjct: 404 VVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQA 463
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L +FE M KPD+IT VGVLSACS+ GL D+G YF M Y + P S HY C++D
Sbjct: 464 LTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMID 523
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR G ++EA NL IR E WGALLGA RIH N+++GE A E V ++EP+N
Sbjct: 524 LLGRAGCLEEAQNL---IRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHN 580
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
SG+Y++L+ +Y + GR D ++ +M++ GV+K PG SW+++ + H F GD HP+
Sbjct: 581 SGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEK 640
Query: 601 HRLRYLLNLLHTEIERE 617
R+ L L +++ E
Sbjct: 641 GRIYAFLEELDLKMKHE 657
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/616 (38%), Positives = 366/616 (59%), Gaps = 3/616 (0%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MR R+ +A+ LF MP+R T T+N M+ GY NG L A LF +P D ++YNT++
Sbjct: 49 MRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLH 108
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
L S ++ A+ +FD M VRD VT+N MIS + +GL+ A F P KD VSWN +
Sbjct: 109 ALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGM 168
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A V R++ A F DV SW +++G V+ G++ EAR+LFD+MP +DV +WN
Sbjct: 169 LAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWN 228
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
+M++GY G + A LF RD+ +W +++G + ++ A F MPE +
Sbjct: 229 IMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVS 288
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WN++++ I+ ++ EA P N+ASW ++ GY + G + A VF+ M +D
Sbjct: 289 WNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDA 348
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W M+ + EE L+ F++M G + + F VL+ C+D+ L+ G Q+H +
Sbjct: 349 VSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGR 408
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
I+ V NA++ MY +CGN++ A F + D++SWN++I G A HG+ ++A
Sbjct: 409 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 468
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
LE+F+ MR T KPDDIT VGVL+ACS++GLV++G YF M + + + + HYTC++D
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR G + EA +L+ ++ E T+WGALLGA RIH N ++G A E++ ELEP N
Sbjct: 529 LLGRAGRLAEAHDLMKDM---PFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPEN 585
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
+G+Y++L+ +Y S G+ DA+++ M+E GVKK PG SWI++ + H F +GD HP+
Sbjct: 586 AGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEK 645
Query: 601 HRLRYLLNLLHTEIER 616
++ L L +++
Sbjct: 646 EKIYAFLEDLDMRMKK 661
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/616 (38%), Positives = 366/616 (59%), Gaps = 3/616 (0%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MR R+ +A+ LF MP+R T T+N M+ GY NG L A LF +P D ++YNT++
Sbjct: 49 MRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLH 108
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
L S ++ A+ +FD M VRD VT+N MIS + +GL+ A F P KD VSWN +
Sbjct: 109 ALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGM 168
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A V R++ A F DV SW +++G V+ G++ EAR+LFD+MP +DV +WN
Sbjct: 169 LAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWN 228
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
+M++GY G + A LF RD+ +W +++G + ++ A F MPE +
Sbjct: 229 IMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVS 288
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WN++++ I+ ++ EA P N+ASW ++ GY + G + A VF+ M +D
Sbjct: 289 WNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDA 348
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W M+ + EE L+ F++M G + + F VL+ C+D+ L+ G Q+H +
Sbjct: 349 VSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGR 408
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
I+ V NA++ MY +CGN++ A F + D++SWN++I G A HG+ ++A
Sbjct: 409 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 468
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
LE+F+ MR T KPDDIT VGVL+ACS++GLV++G YF M + + + + HYTC++D
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR G + EA +L+ ++ E T+WGALLGA RIH N ++G A E++ ELEP N
Sbjct: 529 LLGRAGRLAEAHDLMKDM---PFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPEN 585
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
+G+Y++L+ +Y S G+ DA+++ M+E GVKK PG SWI++ + H F +GD HP+
Sbjct: 586 AGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEK 645
Query: 601 HRLRYLLNLLHTEIER 616
++ L L +++
Sbjct: 646 EKIYAFLEDLDMRMKK 661
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/616 (37%), Positives = 365/616 (59%), Gaps = 3/616 (0%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MR R+ +A+ LF MP+R T T+N M+ GY NG L A LF +P D ++YNT++
Sbjct: 49 MRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLH 108
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
L S ++ A+ +FD M VRD VT+N MIS + +GL+ A F P KD VSWN +
Sbjct: 109 ALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGM 168
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A V R++ A F D SW +++G V+ G++ EAR+LFD+MP +DV +WN
Sbjct: 169 LAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWN 228
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
+M++GY G + A LF RD+ +W +++G + ++ A F MPE +
Sbjct: 229 IMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVS 288
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WN++++ I+ ++ EA P N+ASW ++ GY + G + A VF+ M +D
Sbjct: 289 WNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDA 348
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W M+ + EE L+ F++M G + + F VL+ C+D+ L+ G Q+H +
Sbjct: 349 VSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGR 408
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
I+ V NA++ MY +CGN++ A F + D++SWN++I G A HG+ ++A
Sbjct: 409 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 468
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
LE+F+ MR T KPDDIT VGVL+ACS++GLV++G YF M + + + + HYTC++D
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR G + EA +L+ ++ E T+WGALLGA RIH N ++G A E++ ELEP N
Sbjct: 529 LLGRAGRLAEAHDLMKDM---PFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPEN 585
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
+G+Y++L+ +Y S G+ DA+++ M+E GVKK PG SWI++ + H F +GD HP+
Sbjct: 586 AGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEK 645
Query: 601 HRLRYLLNLLHTEIER 616
++ L L +++
Sbjct: 646 EKIYAFLEDLDMRMKK 661
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/642 (37%), Positives = 371/642 (57%), Gaps = 35/642 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-DMFTYNTVI 59
+ N R++EA+ LFDKMP RD +W +MI Y +NG L A LFN +P + + N ++
Sbjct: 88 LHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYKWNPVCCNAMV 147
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
AG ++ A+ +FD M +D+V+WNSM++GY NG + L+ F M +DVVSWNL
Sbjct: 148 AGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNL 207
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++ V ++ + +F+++ + SW M+ G R G+I EAR+LFD+MP ++V AW
Sbjct: 208 MVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAW 267
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP--ETC 237
N MIA Y+ N V A LF +M +++ SW +ING V ++D A QMP
Sbjct: 268 NAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVA 327
Query: 238 EKT-----------------------------WNSIISVLIRNGLVKEAHSYLEKYPYSN 268
+T WN++I+ + G + EA ++ +
Sbjct: 328 AQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKD 387
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
I SW ++ Y ++G++ +AIK+FE M +++ WN +I GL +N + LK F+ M
Sbjct: 388 IVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGH 447
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
G PD +TF L+ C+ L L +G+Q+H +K VSNA+ITMYA+CG+I S
Sbjct: 448 EGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISS 507
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A L F + D++SWNS+I A +G +AL+LF +M + PD++TFVG+LSACS+
Sbjct: 508 AELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSH 567
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
GL+DQG F CM Y ++P + HY C+VDLLGR G ++EA L +R I +
Sbjct: 568 VGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQL---VRGMKINANAG 624
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+WGALLGACRIH N+++ + A E+++E EP+ + Y++L+ M GR ++ R+ MK
Sbjct: 625 IWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMK 684
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
E G +K+PG SWI++ + H FLS D +HP+ L ++L L
Sbjct: 685 EKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSL 726
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 144/515 (27%), Positives = 256/515 (49%), Gaps = 19/515 (3%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+F +N I L +S + A +VF M ++ VT NSMIS + NG I +A ++F GMP
Sbjct: 15 VFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQ 74
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
+++VSWN +I A ++ R++ A F +M RD+ SWT+M+ R G + +AR LF+ +
Sbjct: 75 RNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLL 134
Query: 172 PAK-DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
P K + N M+AGY N A LF M +DL SW ++ G + + + +F
Sbjct: 135 PYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFF 194
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
++M E +WN ++ + G + + + EK P N SW ++ G+ G++ A +
Sbjct: 195 EEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARR 254
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+F+ M R+V WN MI +N +E + F++M P ++ ++T+V+ +
Sbjct: 255 LFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEM----PEKNSISWTTVINGYVRMGK 310
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
LD RQ+ Q RN AMI+ Y + + A F+ + I D++ WN++I G
Sbjct: 311 LDEARQLLNQMPY--RN--VAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAG 366
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
+ G ++AL LF++M K D +++ ++++ + G +D F+ MK K +
Sbjct: 367 YSQCGRMDEALHLFKQM----VKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVS- 421
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
+ ++ L + G +A+ + +G + + + L +C ++VG+
Sbjct: 422 ----WNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLH 477
Query: 531 ERVMEL-EPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ VM+ + V L MY CG A+ +F
Sbjct: 478 QLVMKSGYATDLFVSNALITMYAKCGSISSAELLF 512
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/531 (28%), Positives = 255/531 (48%), Gaps = 47/531 (8%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N+ I K+G +D A+ +F M ++ T+N++I+ ++ + A+++FDGM R++V
Sbjct: 19 NLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIV 78
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI------GAL-------------- 124
+WNSMI+ Y+ N ++EA ++F MP +D+ SW L+I G L
Sbjct: 79 SWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYKW 138
Query: 125 --VNCQRM----------DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
V C M D A F M A+D+ SW M+ G R G + + F++M
Sbjct: 139 NPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMA 198
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+DV +WNLM+ G+++ G + + + F+K+ + + SW ++ G +I A F Q
Sbjct: 199 ERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQ 258
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
MP WN++I+ ++N V EA S + P N SWT VI GY MG++ A ++
Sbjct: 259 MPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLL 318
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
M R+V MI G +N ++ + F Q+ D + +++ S +D
Sbjct: 319 NQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIR----DVVCWNTMIAGYSQCGRMD 374
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
+ Q +K + N M+ YA+ G + +A+ F + +I+SWNS+I GL
Sbjct: 375 EALHLFKQMVK----KDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLT 430
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD-CMKNKYFLQPR 471
+G AL+ F M KPD TF LS+C++ + G+ MK+ Y
Sbjct: 431 QNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLF 490
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
++ ++ + + G I A L +I D +V W +L+ A ++ N
Sbjct: 491 VSN--ALITMYAKCGSISSAELLFKDI--DHFDV--VSWNSLIAAYALNGN 535
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 249/676 (36%), Positives = 377/676 (55%), Gaps = 66/676 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N R+ +A+ LFDKM QR+ V+WN MI GY N ++ A LF+ M ERD F++ +I
Sbjct: 60 KNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITC 119
Query: 62 LMQSDNVQGAKEVFDGMEVR-DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
+ ++ A+E+F+ + + D WN+MI+GY G D+A +VF MP+KD+VS+N +
Sbjct: 120 YTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSM 179
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV------------------------ 156
+ +M LA +F+ M R+V SW +MV G V
Sbjct: 180 LAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWV 239
Query: 157 -------REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
R G+IVEARKLFD+MP K+V +WN MIA Y+ + + A LF++ +D S
Sbjct: 240 TMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVS 299
Query: 210 WKQLINGLVNSRRIDAAISYFKQMP--ETCEKT--------------------------- 240
W +ING V ++D A + QMP + KT
Sbjct: 300 WTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDA 359
Query: 241 --WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
WNS+I+ ++G + EA + + P N SW +I GY + GE+ A ++FE M R
Sbjct: 360 ICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVR 419
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
+V WN +I G +N L + LK V M + G PD +TF L+ C++L L +G+Q+H
Sbjct: 420 NVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLH 479
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
+K VSNA+I MYA+CG +QSA F + D+ISWNS+I G A +GYA
Sbjct: 480 ELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYAN 539
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
+A FE+M PD++TF+G+LSACS+AGL +QG F CM + ++P + HY+C+
Sbjct: 540 EAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCL 599
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
VDLLGR G ++EA N+ +R ++ + +WG+LL ACR+H N+++G+IA R++ELEP
Sbjct: 600 VDLLGRMGRLEEAFNI---VRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEP 656
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+N+ Y+ L+ M+ GR ED +R+ M+E K PGCSWI++ + F+S D
Sbjct: 657 HNASNYITLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKL 716
Query: 599 KFHRLRYLLNLLHTEI 614
+ ++ +LN L +
Sbjct: 717 RTESIKIILNTLSAHM 732
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 137/521 (26%), Positives = 258/521 (49%), Gaps = 19/521 (3%)
Query: 50 RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
+++F N I L + + AK VF + ++ T+NSM++ + NG + +A ++F M
Sbjct: 15 KNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKM 74
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
+++VSWN +I ++ ++ A F M RD SW +M+ R+G + +AR+LF+
Sbjct: 75 SQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFE 134
Query: 170 KMPAK-DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+P K D WN MIAGY G AE +F+KM +DL S+ ++ G + ++ A+
Sbjct: 135 LVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMK 194
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
+F++M E +WN +++ + N + A EK P N SW ++ G+ G++ A
Sbjct: 195 FFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEA 254
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
K+F+ M ++V WN MI ++ +E +K F KE+ P D ++T+++ +
Sbjct: 255 RKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLF---KET-PYKDCVSWTTMINGYVRV 310
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
LD R+++ Q + A+++ + G I A FS + D I WNS+I
Sbjct: 311 GKLDEAREVYNQ----MPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMI 366
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
G G +AL LF +M + + +++ ++S + AG +D+ F+ M + +
Sbjct: 367 AGYCQSGRMSEALNLFRQMPV----KNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVI 422
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
+ ++ + GL +A+ L + +G + + + L +C ++VG+
Sbjct: 423 S-----WNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQ 477
Query: 529 AGERVMELE-PNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
E +++ N+ V L MY CG + A+++F ++
Sbjct: 478 LHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIE 518
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/672 (36%), Positives = 377/672 (56%), Gaps = 66/672 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTY------ 55
+NARI++A+ LFD+M R+ V+WN MI GY N ++ A LF+ MPERD F++
Sbjct: 60 KNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITC 119
Query: 56 --------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
N +IAG + AK+VF+ M +D+V++NSM
Sbjct: 120 YTRKGKLEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSM 179
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
++GY NG + AL+ F M ++VVSWNL++ V + A F+++ + SW
Sbjct: 180 LAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWV 239
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
M+ GL + G++ EAR+LFD+MP+K+V +WN MIA Y+ + V A LF+KM +D S
Sbjct: 240 TMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVS 299
Query: 210 WKQLINGLVNSRRIDAAISYFKQMP--ETCEKT--------------------------- 240
W +ING + ++D A + QMP + +T
Sbjct: 300 WTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDV 359
Query: 241 --WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
WNS+I+ R+G + EA + + P N SW +I GY + G++ A ++F+ M +
Sbjct: 360 VCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREK 419
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
++ WN +I G +N+L + LK V M + G PD +TF L+ C++L L +G Q+H
Sbjct: 420 NIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLH 479
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
+K V NA+I MYA+CG +QSA F + D+ISWNS+I G A +GYA
Sbjct: 480 EYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYAN 539
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
KA + FE+M PD++TF+G+LSACS+AGL +QG F CM + ++P + HY+C+
Sbjct: 540 KAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCL 599
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
VDLLGR G ++EA N +R ++ + +WG+LLGACR+H N+++G A ER+ ELEP
Sbjct: 600 VDLLGRVGRLEEA---FNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEP 656
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+N+ Y+ L+ M+ GR E+ +R+ M+ K+PGCSWI++ + FLS D +
Sbjct: 657 HNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCSWIEVQNQIQHFLSHDPAKL 716
Query: 599 KFHRLRYLLNLL 610
+ ++ +LN L
Sbjct: 717 RPKNIQIILNTL 728
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 143/534 (26%), Positives = 268/534 (50%), Gaps = 50/534 (9%)
Query: 33 KNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISG 92
K G ++ A+ +F M +++ TYN++I+ L ++ ++ A+++FD M +R++V+WN+MI+G
Sbjct: 29 KLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAG 88
Query: 93 YVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR-DVASWTIM 151
Y+ N +++EA +F MP +D SW L+I +++ A + + + D A W M
Sbjct: 89 YLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAM 148
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
+ G ++G+ +A+K+F++MPAKD+ ++N M+AGY NG + +A F+ M +R++ SW
Sbjct: 149 IAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWN 208
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
++ G V S + +A F+++P +W +++ L + G + EA ++ P N+ S
Sbjct: 209 LMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVS 268
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
W +I Y + +V A+K+F+ M +D W +I G +E + + QM P
Sbjct: 269 WNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQM----P 324
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
D T++++ +D Q+ + +I + N+MI Y+R G + AL
Sbjct: 325 CKDITAQTALMSGLIQNGRIDEADQMFS---RIGAHD-VVCWNSMIAGYSRSGRMDEALN 380
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F +PI + +SWN++I G A G ++A E+F+ MR + + G L
Sbjct: 381 LFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFL-------- 432
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
Q Y D +K+ + ++G+ +G + + +
Sbjct: 433 --QNNLYLDALKS--------------LVMMGK----------------EGKKPDQSTFA 460
Query: 512 ALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGRREDAKRIF 564
L AC ++VG E +++ N+ V L MY CGR + A+++F
Sbjct: 461 CTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVF 514
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 225/456 (49%), Gaps = 16/456 (3%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+++ + A LF+K+P + V+W M+ G K G + A LF++MP +++ ++N +IA
Sbjct: 215 VKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIA 274
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
+Q V A ++F M +D V+W ++I+GY+ G +DEA +V++ MP KD+ + +
Sbjct: 275 TYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTAL 334
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ L+ R+D A+ F +GA DV W M+ G R GR+ EA LF +MP K+ +WN
Sbjct: 335 MSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWN 394
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING-LVNSRRIDAAISYF---KQMPET 236
MI+GY G + A ++FQ M ++++ SW LI G L N+ +DA S K+ +
Sbjct: 395 TMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKP 454
Query: 237 CEKTWNSIISVLIRNGLVK---EAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVF 292
+ T+ +S ++ + H Y+ K Y N N ++ Y + G V SA +VF
Sbjct: 455 DQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVF 514
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ D+ WN +I G N + K F QM PD TF +L+ CS +
Sbjct: 515 RDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLAN 574
Query: 353 LGRQIHAQAIK-IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICG 410
G I I+ A + ++ + R G ++ A + + + W S++
Sbjct: 575 QGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGA 634
Query: 411 LAYHGYAEKALEL--FERMRLTDFKPDDITFVGVLS 444
H K LEL F RL + +P + + LS
Sbjct: 635 CRVH----KNLELGRFAAERLFELEPHNASNYITLS 666
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/616 (37%), Positives = 359/616 (58%), Gaps = 3/616 (0%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MR R+ +A+ LF MP+R T T+N M+ GY NG L A+ F +P D F+YNT++
Sbjct: 118 MRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYNTLLH 177
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
L S ++ + +FD M V+D V++N MIS + +GL+ A F P KD VSWN +
Sbjct: 178 ALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGM 237
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A V R+ A F D SW ++ G V+ +I EA+K+F+KMP +DV +WN
Sbjct: 238 LAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWN 297
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
M++GY G + A LF RD+ +W +++G + ++ A F MP+ +
Sbjct: 298 TMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVS 357
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WN++++ ++ +++EA + P N+ASW ++ GY + G + A +F +M +D
Sbjct: 358 WNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDA 417
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W M+ + EE L+ F +M G + + F VL+ C+D+ L+ G Q+H++
Sbjct: 418 VSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSR 477
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
IK V NA++ MY +CG+++ A F + D++SWN++I G A HG+ ++A
Sbjct: 478 LIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEA 537
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
LE+F+ MR T KPDDIT VGVL+ACS++GLV++G YF M + + + HYTC++D
Sbjct: 538 LEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMID 597
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR G +DEA+NL+ ++ E T+WGALLGA RIH N ++G A E++ ELEP N
Sbjct: 598 LLGRAGRLDEAVNLMKDM---PFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPEN 654
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
+G+Y++L+ +Y S G+ D ++ M E GVKK PG SWI++ + H F GDS HP+
Sbjct: 655 AGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPER 714
Query: 601 HRLRYLLNLLHTEIER 616
+ L L +++
Sbjct: 715 EDIYAFLEDLDIRMKK 730
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/560 (21%), Positives = 227/560 (40%), Gaps = 90/560 (16%)
Query: 18 QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQG---AKEV 74
QR V W +R ++G F + P M + A Q + + A
Sbjct: 44 QRGRVCWRDSVRE--ESGRRHKPEPQFGKPP---MLPSRHLRAAARQRSHRRPPAPADAC 98
Query: 75 FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAE 134
G +V+ N I+ ++ G + +A R+F MP + ++N ++ R+ A
Sbjct: 99 ITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQAL 158
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
S+F+ + D S+ +++ L + + R LFD+MP KD ++N+MI+ + ++
Sbjct: 159 SFFRSIPRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANH----- 213
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
GLV+ R YF PE +WN +++ +RNG +
Sbjct: 214 ---------------------GLVSLAR-----HYFDLAPEKDAVSWNGMLAAYVRNGRI 247
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+EA + + SW ++ GY + ++ A K+F M RDV WN M+ G
Sbjct: 248 QEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRG 307
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
E + F + P D T+T
Sbjct: 308 DMAEARRLF----DVAPIRDVFTWT----------------------------------- 328
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
A+++ YA+ G ++ A F ++P + +SWN+++ E+A ELF+ M +
Sbjct: 329 AIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNV-- 386
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
++ +L+ + AG++D+ R F M K + + ++ + G +E + L
Sbjct: 387 --ASWNTMLTGYAQAGMLDEARAIFGMMPQK-----DAVSWAAMLAAYSQIGFSEETLQL 439
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYL 552
E+ G V+ + + +L C ++ G R+++ G ++ L MY
Sbjct: 440 FKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAG-YGVGCFVGNALLAMYF 498
Query: 553 SCGRREDAKRIFAQMKENGV 572
CG E+A F +M+E V
Sbjct: 499 KCGSMEEAHSAFEEMEERDV 518
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/663 (35%), Positives = 367/663 (55%), Gaps = 68/663 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N RI A+NLFDKMP+R+ V+WN M+ GY NG D A LF MP RD+F++ +I
Sbjct: 18 KNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVIMPRRDLFSWTLMITC 77
Query: 62 LMQSDNVQGAKEVFDGMEV---RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
++ V+ A+E+FD + + V WN+MISGYV G ++EA R+F MP+K+++SWN
Sbjct: 78 YTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNEAKRLFDEMPVKNLISWN 137
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV---------------------- 156
++ ++M L +F EM RDV SW +MV+G +
Sbjct: 138 SMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLDSAWKFFQETQKPNVVS 197
Query: 157 ---------REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL 207
R G I+E+R+LFD+MP++++ +WN MI+ Y+ + A LF++M +RD
Sbjct: 198 WVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCEIDEASRLFEEMPERDS 257
Query: 208 TSWKQLINGLVNSRRIDAAISYFKQMPE--------------TCEKT------------- 240
SW +ING V ++D A +MP C K
Sbjct: 258 VSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDEIGTW 317
Query: 241 ----WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
WN++I+ +G + EA ++ ++ +W +I Y ++G++ A+K+FE M
Sbjct: 318 DVVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTWNTMISCYAQVGQMDRAVKIFEEMG 377
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
RD+ WN +I G N + LK F M G PD +F L+ C+ + L +G Q
Sbjct: 378 ERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVGNQ 437
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
+H +K + V+NA+ITMYA+CG I A L F+ + D+ISWNS+I G A +GY
Sbjct: 438 LHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVFNGICHADVISWNSLIGGYAINGY 497
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
++AL+LFE M PD++TF+G+LSAC++AG+VD G F CM Y ++P + HY
Sbjct: 498 GKEALKLFEEMASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYA 557
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
C+VDLLGR G +DEA + +R ++ + VWGALLGACR H N+++G +A ++ E
Sbjct: 558 CMVDLLGRVGRLDEAFEI---VRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLSEF 614
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSS 596
EP+ + Y++L+ ++ R + + + M + KEPGCSW+++ + H FLS DS+
Sbjct: 615 EPHKTSNYVLLSNIHAEANRWNEVQEVRMLMNASSTVKEPGCSWVEVRNQVHGFLSDDST 674
Query: 597 HPK 599
+
Sbjct: 675 RSR 677
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 247/512 (48%), Gaps = 36/512 (7%)
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF 137
M ++ VT+NSMIS Y NG I+ A +F MP +++VSWN ++ ++ + D A F
Sbjct: 1 MAEKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLF 60
Query: 138 KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA---KDVQAWNLMIAGYLDNGCVGV 194
M RD+ SWT+M+ R G + +AR+LFD +P K V WN MI+GY+ G V
Sbjct: 61 VIMPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNE 120
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A+ LF +M ++L SW ++ G +R++ + +F +M E +WN ++ I+ G +
Sbjct: 121 AKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDL 180
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
A + ++ N+ SW ++ G+ G + + ++F+ M +R++ WN MI +
Sbjct: 181 DSAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRC 240
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
+E + F +M P D+ ++T+++ + LD R++ + RN
Sbjct: 241 EIDEASRLFEEM----PERDSVSWTTMINGYVRIGKLDEARELLNEMPY--RN--IGAQT 292
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
AMI+ Y +C + A F + D++ WN++I G A+HG +AL L +RM
Sbjct: 293 AMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRM----VNK 348
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV-----VDLLGRFGLID 489
D +T+ ++S + G +D+ F+ M + + S + +D L F L+
Sbjct: 349 DMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMG 408
Query: 490 EAMNLLNEIR-ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
+++ A G+ T+ A ++ N + + G + L NN+ L
Sbjct: 409 HEGKKPDQLSFACGLSSCATI-----AALQVGNQLHQVVVKGGYLNYLVVNNA-----LI 458
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
MY CGR +A +F NG+ SW
Sbjct: 459 TMYAKCGRILEAGLVF-----NGICHADVISW 485
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/570 (39%), Positives = 345/570 (60%), Gaps = 4/570 (0%)
Query: 48 PERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFH 107
PE D F + G ++ N++ A+ +FD M RDVV+WN+M+SGY NG + EA +F
Sbjct: 27 PEFD-FLERHDLRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFD 85
Query: 108 GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
MP K+ +SWN ++ A V R++ A F+ ++ SW M+ G V+ R+V+AR +
Sbjct: 86 EMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGI 145
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
FD+MP +D +WN MI+GY NG + A+ LF++ RD+ +W +++G V + +D A
Sbjct: 146 FDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEAR 205
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGS 287
F MPE +WN+II+ ++ + +A E P N++SW +I GY + G++
Sbjct: 206 RVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQ 265
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A F+ M RD W +I G ++ GEE L FV+MK G + +TFTS L+ C++
Sbjct: 266 ARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAE 325
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
+ L+LG+Q+H + +K V NA++ MY +CGNI A + F + +++SWN++
Sbjct: 326 IAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTM 385
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
I G A HG+ ++AL LFE M+ T PDD+T VGVLSACS+ GLVD+G YF M Y
Sbjct: 386 IAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYG 445
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
+ S HYTC++DLLGR G +D+A NL+ + E WGALLGA RIH N ++GE
Sbjct: 446 ITANSKHYTCMIDLLGRAGRLDDAQNLMKNM---PFEPDAATWGALLGASRIHGNTELGE 502
Query: 528 IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGG 587
A + + E+EP+NSG+Y++L+ +Y + GR D R+ +M++ GVKK PG SW+++ +
Sbjct: 503 KAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKI 562
Query: 588 HVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
H F GDS HP+ R+ L L ++++E
Sbjct: 563 HTFTVGDSVHPERDRIYTFLEELDLKMKKE 592
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/451 (33%), Positives = 229/451 (50%), Gaps = 37/451 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N RI++A+ LF+ + ++WN M+ GY K L +A +F++MPERD ++NT+I+
Sbjct: 103 VQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMIS 162
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G Q+ + A+ +F+ VRDV TW +M+SGYV NG++DEA RVF GMP K+ VSWN +
Sbjct: 163 GYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAI 222
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I V C+RMD A F+ M ++V+SW M+ G + G I +AR FD+MP +D +W
Sbjct: 223 IAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWA 282
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
+IAGY +G A LF +M RD R++ S F TC +
Sbjct: 283 AIIAGYAQSGYGEEALHLFVEM-KRD-------------GERLNR--STFTSTLSTCAEI 326
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
+ + +VK LE Y A ++V Y + G + A VFE + ++V
Sbjct: 327 AALELGKQVHGRVVKAG---LESGCYVGNA----LLVMYCKCGNIDDAYIVFEGIEEKEV 379
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH-- 358
WN MI G + G+E L F MK++G PD+ T VL+ CS +D G +
Sbjct: 380 VSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYS 439
Query: 359 -AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHG- 415
Q I N + MI + R G + A ++P D +W +++ HG
Sbjct: 440 MTQDYGITAN--SKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGN 497
Query: 416 --YAEKALELFERMRLTDFKPDDITFVGVLS 444
EKA ++ + + +PD+ +LS
Sbjct: 498 TELGEKAAKM-----IFEMEPDNSGMYVLLS 523
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/610 (37%), Positives = 359/610 (58%), Gaps = 35/610 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R +I+ A+ +FD+MP + V+WN M+ GYF+N A LF++MPER+ ++N +I+G
Sbjct: 28 RIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLISG 87
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+++ V A++ FD M R+VV+W +M+ GYV GL+ EA +F MP K+VVSW +++
Sbjct: 88 YVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVML 147
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
G L+ +R+D A F M +DV + T M++G +EGR+ EAR+LFD+MP ++V +W
Sbjct: 148 GGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTT 207
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
MI+GY+ NG V VA LF+ M +++ SW ++ G RI+ A F MP
Sbjct: 208 MISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMP------- 260
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
+ +V+ N + I+G+ + GEV A +VF+ + +D
Sbjct: 261 --VKAVVACNAM----------------------ILGFGQNGEVAKARQVFDQIREKDDG 296
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
W+ MI E L F M+ G + + SVL++C+ L +LD GRQ+HA+
Sbjct: 297 TWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAEL 356
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
+K + V++ +ITMY +CG++ A F DI+ WNSII G A HG E+AL
Sbjct: 357 VKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEAL 416
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
++F M + D +TFVGVLSACSY G V +G F+ MK+KY ++P++ HY C+VDL
Sbjct: 417 QVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDL 476
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LGR GL+++AM+L+ ++ +E +WGALLGACR H N+ + E+A +++++LEP N+
Sbjct: 477 LGRAGLVNDAMDLIQKM---PVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNA 533
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSS-HPKF 600
G Y++L+ +Y S GR D + M+ V K PGCSWI++ H+F G S+ HP+
Sbjct: 534 GPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPEL 593
Query: 601 HRLRYLLNLL 610
+ +L L
Sbjct: 594 SSIMKMLEKL 603
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 225/426 (52%), Gaps = 14/426 (3%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N + EA+ FD MP+R+ V+W M+RGY + G + A LF QMPE+++ ++ ++
Sbjct: 89 VKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLG 148
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
GL+Q + A+ +FD M V+DVV +MISGY G + EA +F MP ++V+SW +
Sbjct: 149 GLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTM 208
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I V ++D+A F+ M ++ SWT M+ G + GRI EA +LFD MP K V A N
Sbjct: 209 ISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACN 268
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEK 239
MI G+ NG V A +F ++ ++D +W +I A++ F M E +
Sbjct: 269 AMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQS 328
Query: 240 TWNSIISVL--------IRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIK 290
+ S+ISVL + +G ++ H+ L K + S++ + +I Y + G++ A +
Sbjct: 329 NFPSLISVLSVCASLASLDHG--RQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQ 386
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+F+ + +D+ +WN +I G ++ L EE L+ F +M SG + D TF VL+ CS
Sbjct: 387 IFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGK 446
Query: 351 LDLGRQI-HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSII 408
+ G +I + K T M+ + R G + A+ +P+ D I W +++
Sbjct: 447 VKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALL 506
Query: 409 CGLAYH 414
H
Sbjct: 507 GACRTH 512
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 152/383 (39%), Gaps = 85/383 (22%)
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+Y S ++ + I Y +G++ SA +VF+ M + + WN M+ G +N+ E
Sbjct: 10 RYCTSVAIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYL 69
Query: 323 FVQMKE----------SG-----------------PSPDNATFTSVL------------- 342
F +M E SG P + ++T+++
Sbjct: 70 FDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAE 129
Query: 343 TICSDLP-------TLDLGRQIHAQAIKIARNQF-------TTVSNAMITMYARCGNIQS 388
T+ +P T+ LG I + I AR F MI+ Y + G +
Sbjct: 130 TLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAE 189
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F +P ++ISW ++I G +G + A +LFE M + +++++ +L +
Sbjct: 190 ARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMP----EKNEVSWTAMLMGYTQ 245
Query: 449 AGLVDQGRYYFDCMKNK-----------------------YFLQPRS---AHYTCVVDLL 482
G +++ FD M K F Q R ++ ++ +
Sbjct: 246 GGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVY 305
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNS 541
R G EA+NL ++ +G++ + ++L C ++ G ++ E V ++
Sbjct: 306 ERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDV 365
Query: 542 GVYLILTEMYLSCGRREDAKRIF 564
V +L MY+ CG A++IF
Sbjct: 366 FVASVLITMYVKCGDLVKARQIF 388
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/599 (38%), Positives = 348/599 (58%), Gaps = 35/599 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R +I A+N+FD + + +WN ++ GYF N A LF++MPER+ ++N +++G
Sbjct: 28 RLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLVSG 87
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+++ + A++VFD M R+VV+W SM+ GYV GLIDEA +F MP K+VVSW +++
Sbjct: 88 YVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVML 147
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
G L+ R+D A F + +DV + T M+ GL EGR+ EAR++FD+MP ++V AW
Sbjct: 148 GGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTS 207
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
MI+GY N V VA LF+ M D++ +W ++ G S RI+ A FK M
Sbjct: 208 MISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAM-------- 259
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
P +A+ +I+G+ GEVG A VF+ M +D
Sbjct: 260 -----------------------PVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDG 296
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
W+ +I E L F M+ G P+ + S+L++C L +LD GRQ+H+Q
Sbjct: 297 TWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQL 356
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
++ + VS+ +ITMY +CG++ + F DI+ WNSII G A HG+ EKAL
Sbjct: 357 VRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKAL 416
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
E+F M + PD+ITF+GVLSAC Y G V +G F+ MK+KY + ++ HY C+VDL
Sbjct: 417 EVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDL 476
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LGR G ++EAMNL+ + +E VWGALL ACR H N+ + EIA +++++LEP+++
Sbjct: 477 LGRAGKLNEAMNLIENM---PVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSA 533
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS-SHPK 599
G Y++L+ +Y S R +D + M+ V K PGCSWI++++ H+F G S SHP+
Sbjct: 534 GPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPE 592
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 231/435 (53%), Gaps = 14/435 (3%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N I EA+ +FDKMP+R+ V+W M+RGY + G +D A LF +MPE+++ ++ ++
Sbjct: 89 VKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLG 148
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
GL++ V A+ +FD + V+DVV +MI G G + EA +F MP ++VV+W +
Sbjct: 149 GLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSM 208
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I ++D+A F+ M ++ +WT M+ G R GRI EA +LF MP K V A N
Sbjct: 209 ISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACN 268
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEK 239
MI G+ NG VG A +F +M ++D +W LI A++ F M E
Sbjct: 269 GMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRP 328
Query: 240 TWNSIISVLIRNGLV------KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVF 292
+ SIIS+L G + ++ HS L + + +I + +I Y + G++ + +VF
Sbjct: 329 NFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVF 388
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ +++D+ +WN +I G ++ GE+ L+ F +M SG +PD TF VL+ C +
Sbjct: 389 DRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVK 448
Query: 353 LGRQI-HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICG 410
G +I + K +Q T M+ + R G + A+ ++P+ D I W +++
Sbjct: 449 EGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSA 508
Query: 411 LAYHGYAEKALELFE 425
H K L+L E
Sbjct: 509 CRTH----KNLDLAE 519
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 195/423 (46%), Gaps = 20/423 (4%)
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
++ R G+I AR +FD + +K V +WN ++AGY N A+ LF KM +R+ SW
Sbjct: 23 ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWN 82
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
L++G V + I A F +MPE +W S++ ++ GL+ EA + P N+ S
Sbjct: 83 GLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVS 142
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
WT ++ G E G V A ++F+++ +DV MI GL E + F +M P
Sbjct: 143 WTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEM----P 198
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
+ +TS+++ + +D+ R++ ++ ++ AM+ Y R G I A
Sbjct: 199 QRNVVAWTSMISGYAMNNKVDVARKL----FEVMPDKNEVTWTAMLKGYTRSGRINEAAE 254
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F ++P+ + + N +I G +G KA +F++M+ + DD T+ ++ G
Sbjct: 255 LFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMK----EKDDGTWSALIKIYERKGF 310
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
+ F M+ + ++P ++ + G +D + +++ ++ V
Sbjct: 311 ELEALALFSLMQREG-VRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSS 369
Query: 512 ALLGACRIHNNIKVGE-IAGERVME-LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
L I IK G+ + G+RV + + ++ + Y G E A +F +M
Sbjct: 370 VL-----ITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFS 424
Query: 570 NGV 572
+G
Sbjct: 425 SGA 427
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 366 RNQFTT---VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
R+ F++ ++ I+ +AR G I A F + + SWN+I+ G ++ +A +
Sbjct: 9 RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
LF++M + + I++ G++S G++ + R FD M + + +T +V
Sbjct: 69 LFDKMP----ERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVS-----WTSMVRGY 119
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI-AGERVMELEPNNS 541
+ GLIDEA L + E + W +LG I+ G + R+ ++ P
Sbjct: 120 VQEGLIDEAELLFWRMP----EKNVVSWTVMLGGL-----IEDGRVDEARRLFDMIPVKD 170
Query: 542 GVYLI-LTEMYLSCGRREDAKRIFAQMKENGV 572
V + S GR +A+ IF +M + V
Sbjct: 171 VVASTNMIGGLCSEGRLSEAREIFDEMPQRNV 202
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/610 (37%), Positives = 360/610 (59%), Gaps = 42/610 (6%)
Query: 16 MPQRD-TVTWNV-----MIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQ 69
+P++D TV NV MI K+G + A LF++M E D+ T+ TVI+G ++ ++
Sbjct: 41 IPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIE 100
Query: 70 GAKEVFDGMEVR-DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQ 128
A+ +FD ++ + +VVTW +M+ GY+ + I +A ++F+ MP K+VVSWN +I
Sbjct: 101 EARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNG 160
Query: 129 RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD 188
R+D A F++M R+V SW +++ L + GRI EAR+LFD+MP +DV +W MIAG
Sbjct: 161 RIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSK 220
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL 248
NG + A LF +M +R++ SW +I G + R+D A+ F++MPE +WN++I+ L
Sbjct: 221 NGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGL 280
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
I+NG ++ A + P N+ SWT +I G + GE A+K+F M
Sbjct: 281 IQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRM------------- 327
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
+ +G P+ TF SVL CS+L L G+Q+H K
Sbjct: 328 -----------------LSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQD 370
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSS--VPIHDIISWNSIICGLAYHGYAEKALELFER 426
T V +A+I MY++CG + +A F D++SWN II A+HGY ++A+ F+
Sbjct: 371 STFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKE 430
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
MR + FKPDD+T+VG+LSACS+AGLV++G YFD + + R HY C+VDL GR G
Sbjct: 431 MRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAG 490
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
+ EA + + + S VWGALL C +H N+K+G+ A ++++E+EP N+G YL+
Sbjct: 491 RLKEAFGFIERLET---KPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLL 547
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYL 606
L+ +Y S G+ +A R+ +MK+ G+KK+PGCSWI++ + HVF+ GD SH + + L
Sbjct: 548 LSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSL 607
Query: 607 LNLLHTEIER 616
L LH+++++
Sbjct: 608 LRDLHSKMKK 617
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/465 (30%), Positives = 245/465 (52%), Gaps = 57/465 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-PERDMFTYNTVIA 60
++ RI EA+ LFD+M + D +TW +I GY K G ++ A LF+++ ++++ T+ ++
Sbjct: 64 KDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVG 123
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++S+ + A+++F+ M ++VV+WN+MI GY NG ID A+ +F MP ++VVSWN V
Sbjct: 124 GYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTV 183
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ L C R++ A F M RDV SWT M+ GL + GRI EAR LFD+MP ++V +WN
Sbjct: 184 MSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWN 243
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MI GY N + A DLF++M +RDL SW +I GL+ + + A F +MP+ +
Sbjct: 244 AMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVIS 303
Query: 241 WNSIISVLIRNGLVKEA---------------------------------------HSYL 261
W ++I+ ++ G +EA H +
Sbjct: 304 WTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQII 363
Query: 262 EKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFE--LMTTRDVTVWNVMIFGLGENDLGEE 318
K Y + + ++ Y + GE+G+A K+F+ + + RD+ WN +I + G+E
Sbjct: 364 SKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKE 423
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ-----IHAQAIKIARNQFTTVS 373
+ FF +M++SG PD+ T+ +L+ CS ++ G + + ++I + + +
Sbjct: 424 AINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYA--- 480
Query: 374 NAMITMYARCGNIQSA---LLEFSSVPIHDIISWNSIICGLAYHG 415
++ + R G ++ A + + P + W +++ G H
Sbjct: 481 -CLVDLCGRAGRLKEAFGFIERLETKPSARV--WGALLAGCNVHA 522
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/612 (36%), Positives = 355/612 (58%), Gaps = 37/612 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R I+ A+ F+ MP R T ++N ++ GYF+N D A+ LF +MP RD+ +YN +I+G
Sbjct: 29 RAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISG 88
Query: 62 L-MQSDNVQGAKEVFDGMEV-RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
L ++ + A + VV++ S++ GYV +GL+ +A+R+F MP ++ VS+ +
Sbjct: 89 LSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTV 148
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++G L++ R++ A F EM RDV +WT M++G + GRI EAR LFD+MP ++V +W
Sbjct: 149 LLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSW 208
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
MI+GY NG V +A LF+ M +R+ SW ++ G + + ++ A F MPE
Sbjct: 209 TAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE---- 264
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+P +A+ ++VG+ + G V +A VFE M RD
Sbjct: 265 ------------------------HP---VAACNAMMVGFGQRGMVDAAKTVFEKMRERD 297
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
W+ MI +N+ E L F +M G P+ + S+LT+C+ L LD GR++HA
Sbjct: 298 DGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHA 357
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
++ + + +A+ITMY +CGN+ A F + DI+ WNS+I G A HG E+
Sbjct: 358 AMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQ 417
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
AL +F MRL PD IT++G L+ACSY G V +GR F+ M ++P + HY+C+V
Sbjct: 418 ALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMV 477
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
DLLGR GL++EA +L+ + +E +WGAL+GACR+H N ++ E+A ++++ELEP
Sbjct: 478 DLLGRSGLVEEAFDLIKNM---PVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPG 534
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS-SHP 598
N+G Y++L+ +Y S GR EDA ++ + + K PGCSWI+ + H+F SGD +HP
Sbjct: 535 NAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHP 594
Query: 599 KFHRLRYLLNLL 610
+ + +L L
Sbjct: 595 EHAAILRILEKL 606
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 215/430 (50%), Gaps = 41/430 (9%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ + +A LF +MP+R+ V++ V++ G G ++ A LF++MP+RD+ + +++
Sbjct: 123 VRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLS 182
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G Q+ + A+ +FD M R+VV+W +MISGY NG ++ A ++F MP ++ VSW
Sbjct: 183 GYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSW--- 239
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
T M+ G ++ G + +A +LF+ MP V A N
Sbjct: 240 ----------------------------TAMLVGYIQAGHVEDAAELFNAMPEHPVAACN 271
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEK 239
M+ G+ G V A+ +F+KM +RD +W +I + + A+S F++M
Sbjct: 272 AMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRP 331
Query: 240 TWNSIISVLIRNGLV------KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVF 292
+ S+IS+L + +E H+ + + + ++ + + +I Y + G + A +VF
Sbjct: 332 NYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVF 391
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+D+ +WN MI G ++ LGE+ L F M+ +G SPD T+ LT CS +
Sbjct: 392 HTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVK 451
Query: 353 LGRQI-HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICG 410
GR+I ++ + + + M+ + R G ++ A ++P+ D + W +++
Sbjct: 452 EGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Query: 411 LAYHGYAEKA 420
H AE A
Sbjct: 512 CRMHRNAEIA 521
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 175/391 (44%), Gaps = 26/391 (6%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N IA G + A F+ M R S+ L+ G +R DAA+ F++MP
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 240 TWNSIISVL-IRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
++N++IS L +R + +A + L P+ ++ S+T+++ GY G + AI++F+ M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT-ICSDLPTLDLGRQ 356
R+ + V++ GL + E + F +M P D +T++L+ C GR
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEM----PDRDVVAWTAMLSGYC------QAGRI 190
Query: 357 IHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
A+A+ + VS AMI+ YA+ G + A F +P + +SW +++ G G
Sbjct: 191 TEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAG 250
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
+ E A ELF M + VG G+VD + F+ M+ + +
Sbjct: 251 HVEDAAELFNAMPEHPVAACNAMMVGF----GQRGMVDAAKTVFEKMRER-----DDGTW 301
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
+ ++ + + EA++ E+ G+ + ++L C + G ++
Sbjct: 302 SAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR 361
Query: 536 LEPNNSGVYLI--LTEMYLSCGRREDAKRIF 564
+ V+ + L MY+ CG + AKR+F
Sbjct: 362 CS-FDMDVFAVSALITMYIKCGNLDKAKRVF 391
>gi|255559617|ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 656
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/614 (35%), Positives = 352/614 (57%), Gaps = 36/614 (5%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
+++EA+ +FD+MP+RD V++ MI Y KN L A LF ++PER++ + +I+G ++
Sbjct: 66 KVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIPERNVVADSAMISGYVR 125
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
+ + A++VFD M R+V +W S++SGY G +DEA+R+
Sbjct: 126 AGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRL------------------- 166
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
F +M ++V SWT V G + G I EAR +F++MP K++ AW M+
Sbjct: 167 ------------FNQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNIIAWTAMVK 214
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI 244
Y++N + A +LF +M R+L SW +I+G +N+ R++ AI F MP+ E +W ++
Sbjct: 215 SYVENDEIDEAFELFYQMPQRNLYSWNIMISGCINANRLNEAIQLFNSMPQRNEVSWTTL 274
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
++ L RNG+++ A Y + P +IA+W +I Y + G + A +F LM +++ WN
Sbjct: 275 VTGLARNGMMELARKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWN 334
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
+I G N L++ + M S P+ T TSVLT C + L Q H I +
Sbjct: 335 ALIDGYARNGPESNSLRYLILMLRSNFKPNETTITSVLTACDSILEL---MQAHGLVIHL 391
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
Q ++N ++T Y+RCG++ SA F + I DI+SW ++I + HG AL++F
Sbjct: 392 GFEQDKVLANGLVTTYSRCGDVLSARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVF 451
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
RM + KPD ITFVG+LSACS+AGLV +G+ FD M Y ++PR+ HY+C+VD+LGR
Sbjct: 452 ARMLRSGAKPDGITFVGLLSACSHAGLVKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGR 511
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G +++AM +++E+ E V GALLGACR+H ++ + GE+++E EP +SG Y
Sbjct: 512 AGEMNKAMKVVSEMPPH--ECDGAVLGALLGACRLHKDVGLANHIGEKLIEKEPTSSGSY 569
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
++L Y +CG+ + + +MKE VKKEPG S I++ HVF D SHP+ +
Sbjct: 570 VLLANAYAACGKWNEFAEVRKEMKERNVKKEPGFSQIEVKGKSHVFFVRDRSHPQLEEIY 629
Query: 605 YLLNLLHTEIEREI 618
L+ + RE+
Sbjct: 630 LFLDEKLLPLMREM 643
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 215/417 (51%), Gaps = 28/417 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R R+ +A+ +FD+M +R+ +W ++ GYFK G +D AM LFNQMPE+++ ++ T +
Sbjct: 124 VRAGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQMPEKNVVSWTTAVV 183
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G Q+ + A+++F+ M ++++ W +M+ YV N IDEA +F+ MP +++ SWN++
Sbjct: 184 GYAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFELFYQMPQRNLYSWNIM 243
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I +N R++ A F M R+ SWT +V GL R G + ARK FD MP KD+ AWN
Sbjct: 244 ISGCINANRLNEAIQLFNSMPQRNEVSWTTLVTGLARNGMMELARKYFDHMPTKDIAAWN 303
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET---- 236
MI Y+D G + A +LF M ++++ SW LI+G + ++ Y M +
Sbjct: 304 AMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSLRYLILMLRSNFKP 363
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTN-VIVGYFEMGEVGSAIKVFELM 295
E T S+++ + +AH + + N ++ Y G+V SA +F+ +
Sbjct: 364 NETTITSVLTACDSILELMQAHGLVIHLGFEQDKVLANGLVTTYSRCGDVLSARFIFDQL 423
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+D+ W MI + G L+ F +M SG PD TF +L+ CS
Sbjct: 424 EIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGITFVGLLSACS--------- 474
Query: 356 QIHAQAIKIARNQFTTVSNA------------MITMYARCGNIQSALLEFSSVPIHD 400
HA +K + F ++S A ++ + R G + A+ S +P H+
Sbjct: 475 --HAGLVKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSEMPPHE 529
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 208/463 (44%), Gaps = 77/463 (16%)
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
A D + ++ L G++ EARK+FD+MP +D ++ MI YL N + AE LF++
Sbjct: 48 ASDTYESNVKISNLGLRGKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFRE 107
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
+ +R++ + +I+G V + R+D A F QM E +W S++S + G V EA
Sbjct: 108 IPERNVVADSAMISGYVRAGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLF 167
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
+ P N+ SWT +VGY + G + A +F M +++ W M+ END +E +
Sbjct: 168 NQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFE 227
Query: 322 FFVQMKE---------------------------SGPSPDNATFTSVLTICSDLPTLDLG 354
F QM + S P + ++T+++T + ++L
Sbjct: 228 LFYQMPQRNLYSWNIMISGCINANRLNEAIQLFNSMPQRNEVSWTTLVTGLARNGMMELA 287
Query: 355 RQI--HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
R+ H IA NAMIT Y G++ A F+ +P +I+SWN++I G A
Sbjct: 288 RKYFDHMPTKDIA------AWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYA 341
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
+G +L M ++FKP++ T VL+AC
Sbjct: 342 RNGPESNSLRYLILMLRSNFKPNETTITSVLTACD------------------------- 376
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
+++L+ GL+ +++ A+G+ + + G +L A I + +++ +I
Sbjct: 377 ----SILELMQAHGLVIHLGFEQDKVLANGLVTTYSRCGDVLSARFIFDQLEIKDIVSWT 432
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
M L +N G CG A ++FA+M +G K +
Sbjct: 433 AMILAYSNHG-----------CG--PHALQVFARMLRSGAKPD 462
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/612 (36%), Positives = 354/612 (57%), Gaps = 37/612 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R I+ A+ F+ MP R T ++N ++ GYF+N D A+ LF +MP RD+ +YN +I+G
Sbjct: 29 RAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISG 88
Query: 62 L-MQSDNVQGAKEVFDGMEV-RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
L ++ + A + VV++ S++ GYV +GL+ +A+R+F MP ++ VS+ +
Sbjct: 89 LSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTV 148
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++G L++ R++ A F EM RDV +WT M++G + GRI EAR LFD+MP ++V +W
Sbjct: 149 LLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSW 208
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
MI+GY NG V +A LF+ M +R+ SW ++ G + + ++ A F MPE
Sbjct: 209 TAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE---- 264
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+P +A+ ++VG+ + G V +A VFE M RD
Sbjct: 265 ------------------------HP---VAACNAMMVGFGQRGMVDAAKTVFEKMCERD 297
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
W+ MI +N+ E L F +M G P+ + S+LT+C+ L LD GR++HA
Sbjct: 298 DGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHA 357
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
++ + + +A+ITMY +CGN+ A F + DI+ WNS+I G A HG E+
Sbjct: 358 AMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQ 417
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
AL +F MRL PD IT++G L+ACSY G V +GR F+ M ++P + HY+C+V
Sbjct: 418 ALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMV 477
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
DLLGR GL++EA +L+ + +E +WGAL+GACR+H N ++ E A ++++ELEP
Sbjct: 478 DLLGRSGLVEEAFDLIKNM---PVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPG 534
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS-SHP 598
N+G Y++L+ +Y S GR EDA ++ + + K PGCSWI+ + H+F SGD +HP
Sbjct: 535 NAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHP 594
Query: 599 KFHRLRYLLNLL 610
+ + +L L
Sbjct: 595 EHAAILRILEKL 606
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 222/446 (49%), Gaps = 43/446 (9%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ + +A LF +MP+R+ V++ V++ G G ++ A LF++MP+RD+ + +++
Sbjct: 123 VRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLS 182
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G Q+ + A+ +FD M R+VV+W +MISGY NG ++ A ++F MP ++ VSW
Sbjct: 183 GYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSW--- 239
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
T M+ G ++ G + +A +LF+ MP V A N
Sbjct: 240 ----------------------------TAMLVGYIQAGHVEDAAELFNAMPEHPVAACN 271
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEK 239
M+ G+ G V A+ +F+KM +RD +W +I + + A+S F++M
Sbjct: 272 AMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRP 331
Query: 240 TWNSIISVLIRNGLV------KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVF 292
+ S+IS+L + +E H+ + + + ++ + + +I Y + G + A +VF
Sbjct: 332 NYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVF 391
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+D+ +WN MI G ++ LGE+ L F M+ +G SPD T+ LT CS +
Sbjct: 392 HTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVK 451
Query: 353 LGRQI-HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICG 410
GR+I ++ + + + M+ + R G ++ A ++P+ D + W +++
Sbjct: 452 EGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Query: 411 LAYHGYAEKALELFERMRLTDFKPDD 436
H AE A F +L + +P +
Sbjct: 512 CRMHRNAEIA--EFAAKKLLELEPGN 535
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 174/391 (44%), Gaps = 26/391 (6%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N IA G + A F+ M R S+ L+ G +R DAA+ F++MP
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 240 TWNSIISVL-IRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
++N++IS L +R + +A + L P+ ++ S+T+++ GY G + AI++F+ M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT-ICSDLPTLDLGRQ 356
R+ + V++ GL + E + F +M P D +T++L+ C GR
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEM----PDRDVVAWTAMLSGYC------QAGRI 190
Query: 357 IHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
A+A+ + VS AMI+ YA+ G + A F +P + +SW +++ G G
Sbjct: 191 TEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAG 250
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
+ E A ELF M + VG G+VD + F+ M + +
Sbjct: 251 HVEDAAELFNAMPEHPVAACNAMMVGF----GQRGMVDAAKTVFEKMCER-----DDGTW 301
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
+ ++ + + EA++ E+ G+ + ++L C + G ++
Sbjct: 302 SAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR 361
Query: 536 LEPNNSGVYLI--LTEMYLSCGRREDAKRIF 564
+ V+ + L MY+ CG + AKR+F
Sbjct: 362 CS-FDMDVFAVSALITMYIKCGNLDKAKRVF 391
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/612 (36%), Positives = 354/612 (57%), Gaps = 37/612 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R I+ A+ F+ MP R T ++N ++ GYF+N D A+ LF +MP RD+ +YN +I+G
Sbjct: 29 RAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISG 88
Query: 62 L-MQSDNVQGAKEVFDGMEV-RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
L ++ + A + VV++ S++ GYV +GL+ +A+R+F MP ++ VS+ +
Sbjct: 89 LSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTV 148
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++G L++ R++ A F EM RDV +WT M++G + GRI EAR LFD+MP ++V +W
Sbjct: 149 LLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSW 208
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
MI+GY NG V +A LF+ M +R+ SW ++ G + + ++ A F MPE
Sbjct: 209 TAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE---- 264
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+P +A+ ++VG+ + G V +A VFE M RD
Sbjct: 265 ------------------------HP---VAACNAMMVGFGQRGMVDAAKTVFEKMCERD 297
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
W+ MI +N+ E L F +M G P+ + S+LT+C+ L LD GR++HA
Sbjct: 298 DGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHA 357
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
++ + + +A+ITMY +CGN+ A F + DI+ WNS+I G A HG E+
Sbjct: 358 AMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQ 417
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
AL +F MRL PD IT++G L+ACSY G V +GR F+ M ++P + HY+C+V
Sbjct: 418 ALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMV 477
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
DLLGR GL++EA +L+ + +E +WGAL+GACR+H N ++ E A ++++ELEP
Sbjct: 478 DLLGRSGLVEEAFDLIKNM---PVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPG 534
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS-SHP 598
N+G Y++L+ +Y S GR EDA ++ + + K PGCSWI+ + H+F SGD +HP
Sbjct: 535 NAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHP 594
Query: 599 KFHRLRYLLNLL 610
+ + +L L
Sbjct: 595 EHAAILRILEKL 606
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 222/446 (49%), Gaps = 43/446 (9%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ + +A LF +MP+R+ V++ V++ G G ++ A LF++MP+RD+ + +++
Sbjct: 123 VRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLS 182
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G Q+ + A+ +FD M R+VV+W +MISGY NG ++ A ++F MP ++ VSW
Sbjct: 183 GYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSW--- 239
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
T M+ G ++ G + +A +LF+ MP V A N
Sbjct: 240 ----------------------------TAMLVGYIQAGHVEDAAELFNAMPEHPVAACN 271
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEK 239
M+ G+ G V A+ +F+KM +RD +W +I + + A+S F++M
Sbjct: 272 AMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRP 331
Query: 240 TWNSIISVLIRNGLV------KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVF 292
+ S+IS+L + +E H+ + + + ++ + + +I Y + G + A +VF
Sbjct: 332 NYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVF 391
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+D+ +WN MI G ++ LGE+ L F M+ +G SPD T+ LT CS +
Sbjct: 392 HTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVK 451
Query: 353 LGRQI-HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICG 410
GR+I ++ + + + M+ + R G ++ A ++P+ D + W +++
Sbjct: 452 EGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Query: 411 LAYHGYAEKALELFERMRLTDFKPDD 436
H AE A F +L + +P +
Sbjct: 512 CRMHRNAEIA--EFAAKKLLELEPGN 535
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 174/391 (44%), Gaps = 26/391 (6%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N IA G + A F+ M R S+ L+ G +R DAA+ F++MP
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 240 TWNSIISVL-IRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
++N++IS L +R + +A + L P+ ++ S+T+++ GY G + AI++F+ M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT-ICSDLPTLDLGRQ 356
R+ + V++ GL + E + F +M P D +T++L+ C GR
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEM----PDRDVVAWTAMLSGYC------QAGRI 190
Query: 357 IHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
A+A+ + VS AMI+ YA+ G + A F +P + +SW +++ G G
Sbjct: 191 TEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAG 250
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
+ E A ELF M + VG G+VD + F+ M + +
Sbjct: 251 HVEDAAELFNAMPEHPVAACNAMMVGF----GQRGMVDAAKTVFEKMCER-----DDGTW 301
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
+ ++ + + EA++ E+ G+ + ++L C + G ++
Sbjct: 302 SAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR 361
Query: 536 LEPNNSGVYLI--LTEMYLSCGRREDAKRIF 564
+ V+ + L MY+ CG + AKR+F
Sbjct: 362 CS-FDMDVFAVSALITMYIKCGNLDKAKRVF 391
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/613 (37%), Positives = 364/613 (59%), Gaps = 40/613 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R I+ A+ FD MP R T ++N +I GYF+N D A+ LF++MP RD+ +YN +IA
Sbjct: 28 VRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSRDLGSYNALIA 87
Query: 61 GL-MQSDNVQGAKEVFDGMEV-RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
GL ++ + A + + VV++ S++ GYV +GL+ +A+R+FH MP ++ V++
Sbjct: 88 GLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQMPERNHVTYT 147
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+++G ++ R++ A F EM +DV + T M++G + GRI EAR LFD+MP ++V +
Sbjct: 148 VLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVS 207
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
W MI+GY NG V +A LF+ M DR+ SW ++ G + + ++ A F MP+
Sbjct: 208 WTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPD--- 264
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
+P +A+ ++VG+ + G V +A +FE M R
Sbjct: 265 -------------------------HP---VAACNAMMVGFGQHGMVDAAKAMFERMCAR 296
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
D W+ MI +N+ E L F +M G P+ +F S+LT+C+ L T D GR++H
Sbjct: 297 DDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELH 356
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
A ++ + + +A+ITMY +CGN+ A F+ D++ WNS+I G A HG E
Sbjct: 357 AAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGE 416
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
+AL +F+ +RL PD IT++GVL+ACSY G V +GR F+ M ++ +AHY+C+
Sbjct: 417 EALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCM 476
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
VDLLGR GL+DEA++L+N + +E +WGAL+GACR+H N ++ E+A ++++ELEP
Sbjct: 477 VDLLGRAGLVDEALDLINNM---PVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEP 533
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS-SH 597
++G Y++L+ +Y S GR EDA + + + K PGCSWI+ N H+F SGD SH
Sbjct: 534 GSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSH 593
Query: 598 PKFHRLRYLLNLL 610
P+ H + +LN+L
Sbjct: 594 PE-HAI--ILNML 603
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 176/406 (43%), Gaps = 26/406 (6%)
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
A V A N IA + G + A F M R S+ LI G + DAA+ F +
Sbjct: 14 APAVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHR 73
Query: 233 MPETCEKTWNSIISVL-IRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIK 290
MP ++N++I+ L +R + +A + L P ++ S+T+++ GY G + AI+
Sbjct: 74 MPSRDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIR 133
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT-ICSDLP 349
+F M R+ + V++ G + E K F +M P D T++L+ C
Sbjct: 134 LFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEM----PDKDVVARTAMLSGYC---- 185
Query: 350 TLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
GR A+A+ + VS AMI+ YA+ G + A F +P + +SW +++
Sbjct: 186 --QAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAML 243
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
G G+ E A +LF M + VG G+VD + F+ M +
Sbjct: 244 VGYIQAGHVEDAEDLFNAMPDHPVAACNAMMVGF----GQHGMVDAAKAMFERMCAR--- 296
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
++ ++ + + + EA++ E+ GI + T + ++L C G
Sbjct: 297 --DDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRE 354
Query: 529 AGERVMELEPNNSGVYLI--LTEMYLSCGRREDAKRIFAQMKENGV 572
++ ++ V+ + L MY+ CG + AKR+F + V
Sbjct: 355 LHAAMLRCS-FDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDV 399
>gi|356532382|ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Glycine max]
Length = 669
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/594 (37%), Positives = 355/594 (59%), Gaps = 5/594 (0%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
NV I ++G LD A LF++MP+RD +YN++IA +++ ++ A+ VF M R+VV
Sbjct: 69 NVEITILGRHGKLDEARKLFDEMPQRDDVSYNSMIAVYLKNKDLLEAETVFKEMPQRNVV 128
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
++MI GY G +D+A +VF M ++ SW +I +C +++ A F +M R+
Sbjct: 129 AESAMIDGYAKVGRLDDARKVFDNMTQRNAFSWTSLISGYFSCGKIEEALHLFDQMPERN 188
Query: 145 VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD 204
V SWT++V G R G + A + F MP K++ AW M+ YLDNGC A LF +M +
Sbjct: 189 VVSWTMVVLGFARNGLMDHAGRFFYLMPEKNIIAWTAMVKAYLDNGCFSEAYKLFLEMPE 248
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
R++ SW +I+G + + R+D AI F+ MP+ +W +++S L +N ++ A Y +
Sbjct: 249 RNVRSWNIMISGCLRANRVDEAIGLFESMPDRNHVSWTAMVSGLAQNKMIGIARKYFDLM 308
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
PY ++A+WT +I + G + A K+F+ + ++V WN MI G N E L FV
Sbjct: 309 PYKDMAAWTAMITACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARNSYVGEALNLFV 368
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
M S P+ T TSV+T C + L Q HA I + T ++NA+IT+Y++ G
Sbjct: 369 LMLRSCFRPNETTMTSVVTSCDGMVEL---MQAHAMVIHLGFEHNTWLTNALITLYSKSG 425
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
++ SA L F + D++SW ++I + HG+ AL++F RM ++ KPD++TFVG+LS
Sbjct: 426 DLCSARLVFEQLKSKDVVSWTAMIVAYSNHGHGHHALQVFARMLVSGIKPDEVTFVGLLS 485
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
ACS+ GLV QGR FD +K Y L P++ HY+C+VD+LGR GL+DEAM+++ I +
Sbjct: 486 ACSHVGLVHQGRRLFDSIKGTYNLTPKAEHYSCLVDILGRAGLVDEAMDVVATIPPSARD 545
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ V ALLGACR+H ++ + GE+++ELEP++SG Y++L Y + G+ ++ ++
Sbjct: 546 EAVLV--ALLGACRLHGDVAIANSIGEKLLELEPSSSGGYVLLANTYAAEGQWDEFAKVR 603
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREI 618
+M+E VK+ PG S IQI HVF+ G+ SHP+ + LL + RE+
Sbjct: 604 KRMRERNVKRIPGYSQIQITGKNHVFVVGERSHPQIEEIYRLLQQNLQPLMREM 657
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 217/435 (49%), Gaps = 39/435 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N + EA+ +F +MPQR+ V + MI GY K G LD+A +F+ M +R+ F++ ++I+
Sbjct: 107 LKNKDLLEAETVFKEMPQRNVVAESAMIDGYAKVGRLDDARKVFDNMTQRNAFSWTSLIS 166
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ A +FD M R+VV+W ++ G+ NGL+D A R F+ MP K++++W +
Sbjct: 167 GYFSCGKIEEALHLFDQMPERNVVSWTMVVLGFARNGLMDHAGRFFYLMPEKNIIAWTAM 226
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A ++ A F EM R+V SW IM++G +R R+ EA LF+ MP ++ +W
Sbjct: 227 VKAYLDNGCFSEAYKLFLEMPERNVRSWNIMISGCLRANRVDEAIGLFESMPDRNHVSWT 286
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
M++G N +G+A F M +D+ +W +I V+ +D A F Q+PE +
Sbjct: 287 AMVSGLAQNKMIGIARKYFDLMPYKDMAAWTAMITACVDEGLMDEARKLFDQIPEKNVGS 346
Query: 241 WNSIISVLIRNGLVKE-----------------------------------AHSYLEKYP 265
WN++I RN V E AH+ +
Sbjct: 347 WNTMIDGYARNSYVGEALNLFVLMLRSCFRPNETTMTSVVTSCDGMVELMQAHAMVIHLG 406
Query: 266 YSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
+ + TN ++ Y + G++ SA VFE + ++DV W MI + G L+ F
Sbjct: 407 FEHNTWLTNALITLYSKSGDLCSARLVFEQLKSKDVVSWTAMIVAYSNHGHGHHALQVFA 466
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYAR 382
+M SG PD TF +L+ CS + + GR++ +IK N + ++ + R
Sbjct: 467 RMLVSGIKPDEVTFVGLLSACSHVGLVHQGRRLF-DSIKGTYNLTPKAEHYSCLVDILGR 525
Query: 383 CGNIQSALLEFSSVP 397
G + A+ +++P
Sbjct: 526 AGLVDEAMDVVATIP 540
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 141/286 (49%), Gaps = 24/286 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R R+ EA LF+ MP R+ V+W M+ G +N + A F+ MP +DM + +I
Sbjct: 262 LRANRVDEAIGLFESMPDRNHVSWTAMVSGLAQNKMIGIARKYFDLMPYKDMAAWTAMIT 321
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-- 118
+ + A+++FD + ++V +WN+MI GY N + EAL +F M L+ N
Sbjct: 322 ACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARNSYVGEALNLFVLM-LRSCFRPNET 380
Query: 119 LVIGALVNCQRM-DLAESYFKEMG-ARDVASWTIMVNGLV----REGRIVEARKLFDKMP 172
+ + +C M +L +++ + + +W + N L+ + G + AR +F+++
Sbjct: 381 TMTSVVTSCDGMVELMQAHAMVIHLGFEHNTW--LTNALITLYSKSGDLCSARLVFEQLK 438
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLIN-----GLVNS--R 221
+KDV +W MI Y ++G A +F +M D ++ L++ GLV+ R
Sbjct: 439 SKDVVSWTAMIVAYSNHGHGHHALQVFARMLVSGIKPDEVTFVGLLSACSHVGLVHQGRR 498
Query: 222 RIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS 267
D+ + P+ + ++ ++ +L R GLV EA + P S
Sbjct: 499 LFDSIKGTYNLTPKA--EHYSCLVDILGRAGLVDEAMDVVATIPPS 542
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/590 (37%), Positives = 350/590 (59%), Gaps = 4/590 (0%)
Query: 22 VTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
++ N +I Y + G ++ A +F++M ++++ ++N+++AG Q+ Q A+ +FD M R
Sbjct: 99 ISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER 158
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
+ ++WN ++SGY+ NG+I+EA VF MP ++VVSW ++ V + AE+ F +M
Sbjct: 159 NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP 218
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
++V SWT+M+ GL++EGRI EA +LFD MP KDV MI GY G + A LF +
Sbjct: 219 EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDE 278
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M R++ SW +I G V ++++D A F+ MPE E +W +++ G + EA
Sbjct: 279 MPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELF 338
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
P ++ + +I+ + + GEV A +VF+ M +D W+ MI L + L+
Sbjct: 339 NAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALE 398
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F M+ G P+ + SVL++C+ L LD GR+IHAQ ++ + V++ +++MY
Sbjct: 399 LFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYI 458
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CGN+ A F + D++ WNSII G A HG +AL +F M + PDD+TFVG
Sbjct: 459 KCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVG 518
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
VLSACSY G V +G F+ M+ KY ++ + HY C+VDLLGR G ++EAM+L+ ++
Sbjct: 519 VLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKM--- 575
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
+E +WGALLGACR H + + E+A ++++ LEP N+G +++L+ +Y S GR +D
Sbjct: 576 PMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVA 635
Query: 562 RIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSS-HPKFHRLRYLLNLL 610
+ M++ V K PGCSWI + H F GDSS HP+ + +L L
Sbjct: 636 ELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWL 685
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 218/422 (51%), Gaps = 10/422 (2%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
N I EA+ +FD+MP+R+ V+W M+RGY K G + A LF QMPE+++ ++ ++ GL
Sbjct: 173 NGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGL 232
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
+Q + A +FD M +DVVT +MI GY G + EA +F MP ++VVSW +I
Sbjct: 233 LQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMIT 292
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
V Q++D+A F+ M ++ SWT M+ G GR+ EA +LF+ MP K V A N M
Sbjct: 293 GYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAM 352
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTW 241
I + NG V A +F +M ++D +W +I A+ F+ M E +
Sbjct: 353 ILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNF 412
Query: 242 NSIISVL-IRNGLV-----KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFEL 294
S+ISVL + GL +E H+ L + + +V++ Y + G + A +VF+
Sbjct: 413 PSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDR 472
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+DV +WN +I G ++ LG E L+ F M SG PD+ TF VL+ CS + G
Sbjct: 473 FAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKG 532
Query: 355 RQI-HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLA 412
+I ++ K Q M+ + R G + A+ +P+ D I W +++
Sbjct: 533 LEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACR 592
Query: 413 YH 414
H
Sbjct: 593 TH 594
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+ F N++IT Y+R G I+ A + F + +IISWNSI+ G + ++A +F++
Sbjct: 95 SNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDK 154
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
M + + I++ G++S G++++ R FD M + + +T +V + G
Sbjct: 155 MS----ERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVS-----WTAMVRGYVKEG 205
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
+I EA L ++ + + G LL RI ++ ++ E+ + N G
Sbjct: 206 MISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIG---- 261
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGV 572
Y GR +A+ +F +M V
Sbjct: 262 ---GYCQVGRLVEARMLFDEMPRRNV 284
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/654 (35%), Positives = 358/654 (54%), Gaps = 66/654 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTY------ 55
+N RI A+ LFD MPQR+ V+WN MI GY N +++A LF++M +RD++++
Sbjct: 58 KNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITC 117
Query: 56 --------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
N +IAG + + AK++FD M V++VV+WNS+
Sbjct: 118 YTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSI 177
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
+SGY NG + L+ F M ++VVSWNL++ V +D A +FK++ +V SW
Sbjct: 178 LSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWV 237
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
M++G GR+ EAR LF++MP K++ +WN MI Y+ + A LF +M ++D S
Sbjct: 238 TMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVS 297
Query: 210 WKQLINGLV-------------------------------NSRRIDAAISYFKQMPETCE 238
W +ING V S R+D A F Q+
Sbjct: 298 WTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDS 357
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
WNS+I+ G EA ++ ++ SW +I Y + G++ A+++F M R
Sbjct: 358 VCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQER 417
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
+V WN +I G +N L E L F+ MK+ G PD T L ++L L++G Q+H
Sbjct: 418 NVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLH 477
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
IK V NA++TMYA+ G + A F+ + D++SWNS+I G A +G +
Sbjct: 478 HLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGK 537
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
+A+ELFE M L PD++TF G+LSAC++ G VDQG F M Y ++P+S HY CV
Sbjct: 538 EAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACV 597
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
++LLGR G ++EA+ ++ ++ S +WGALL ACRIH+N+++ + + ER++ LEP
Sbjct: 598 INLLGRVGRLEEAVEIVQGMKTVS---SAKIWGALLWACRIHHNLELAKYSAERLLALEP 654
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLS 592
N+ Y++L+ M+ GR + +R+ MKEN +K+PGCSWI+I++ H FLS
Sbjct: 655 QNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLHCFLS 708
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 163/554 (29%), Positives = 265/554 (47%), Gaps = 83/554 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R+ RI+EA +F KM +R+ VT+N MI Y KNG + NA LF+ MP+R++ ++N++IAG
Sbjct: 27 RSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAG 86
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTW--------------------------------NSM 89
+ ++ V+ A +FD M RD+ +W N++
Sbjct: 87 YLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNAL 146
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
I+GY L EA ++F M +K+VVSWN ++ +M L +F+ MG R+V SW
Sbjct: 147 IAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWN 206
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+MV+G V G + A F K+P +V +W M++G+ G + A +LF +M ++L S
Sbjct: 207 LMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVS 266
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
W +I V +ID A F +MPE +W ++I+ +R G + +A L PY NI
Sbjct: 267 WNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNI 326
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
A+ T +I GY + G + A ++F ++ RD WN MI G +E L+ F +M
Sbjct: 327 AAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEM--- 383
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
+C D+ + N MI YA+ G + A
Sbjct: 384 --------------VCKDMVSW----------------------NTMIAAYAQAGQMDKA 407
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
L F+ + +++SWNS+I G +G +AL F M+ KPD T V L A +
Sbjct: 408 LEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANL 467
Query: 450 GLVDQG-RYYFDCMK----NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA-DGI 503
++ G + + +K N F++ ++ + + G + EA N+ EI+ D +
Sbjct: 468 AALNVGVQLHHLTIKTGFGNDLFVK------NAILTMYAKSGRVPEAENVFAEIKXKDVV 521
Query: 504 EVSPTVWGALLGAC 517
+ + G L C
Sbjct: 522 SWNSLIAGYALNGC 535
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 216/410 (52%), Gaps = 15/410 (3%)
Query: 23 TWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
T N+ I ++G ++ A+ +F +M ER++ TYN++I+ ++ + A+E+FD M R+
Sbjct: 17 TQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRN 76
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM-G 141
+V+WNSMI+GY+ N L+++A R+F M +D+ SW L+I ++ A F +
Sbjct: 77 LVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPD 136
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+D ++ G ++ EA+KLFD+M K+V +WN +++GY NG + + F+
Sbjct: 137 KQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEA 196
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M +R++ SW +++G V +D+A +FK++P +W +++S G + EA +
Sbjct: 197 MGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLF 256
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG---LGENDLGEE 318
+ P N+ SW +I Y ++ A K+F M +D W MI G +G+ E
Sbjct: 257 NEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQARE 316
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L P + A T+++ +D +I +Q I + + + N+MIT
Sbjct: 317 ILNLM-------PYKNIAAQTAMINGYLQSGRMDEANEIFSQ-ISV---RDSVCWNSMIT 365
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
YA CG AL F + D++SWN++I A G +KALE+F M+
Sbjct: 366 GYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQ 415
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/523 (27%), Positives = 257/523 (49%), Gaps = 19/523 (3%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+FT N I+ L +S ++ A VF M R++VT+NSMIS Y NG I A +F MP
Sbjct: 15 VFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
+++VSWN +I ++ + ++ A F M RD+ SWT+M+ R G + +AR+LF+ +
Sbjct: 75 RNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLL 134
Query: 172 PAK-DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
P K D N +IAGY A+ LF +M +++ SW +++G + ++ + +F
Sbjct: 135 PDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFF 194
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+ M E +WN ++ + G + A + +K P N+ SW ++ G+ G + A
Sbjct: 195 EAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARN 254
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+F M T+++ WN MI + ++ K F++M P D+ ++T+++ +
Sbjct: 255 LFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEM----PEKDSVSWTAMINGYVRVGK 310
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
L R+I + + + AMI Y + G + A FS + + D + WNS+I G
Sbjct: 311 LLQAREI----LNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITG 366
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
A+ G ++AL LF+ M D +++ +++A + AG +D+ F+ M+ + +
Sbjct: 367 YAHCGRTDEALRLFQEMVCKDM----VSWNTMIAAYAQAGQMDKALEMFNEMQERNVVS- 421
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIA 529
+ ++ + GL EA+N ++ G + T L A + VG ++
Sbjct: 422 ----WNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLH 477
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ N+ V + MY GR +A+ +FA++K V
Sbjct: 478 HLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDV 520
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 110/279 (39%), Gaps = 58/279 (20%)
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
+ + N I+ R G I+ A+ F + +I+++NS+I A +G A ELF+
Sbjct: 11 KGSYVFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFD 70
Query: 426 RM-------------------------RLTD--FKPDDITFVGVLSACSYAGLVDQGRYY 458
M RL D FK D ++ +++ + G +++ R
Sbjct: 71 LMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKAREL 130
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F+ + +K R+A ++ + L EA L +E+ + W ++L
Sbjct: 131 FNLLPDKQDTVCRNA----LIAGYAKKRLFREAKKLFDEMLVKNV----VSWNSILSGYT 182
Query: 519 IHNNIKVG----EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
+ +++G E GER N + ++ + Y+ G + A F ++ V
Sbjct: 183 KNGKMQLGLQFFEAMGER-------NVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNV-- 233
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
SW+ + LSG + + + R L N + T+
Sbjct: 234 ---VSWVTM-------LSGFAHYGRMTEARNLFNEMPTK 262
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/590 (37%), Positives = 350/590 (59%), Gaps = 4/590 (0%)
Query: 22 VTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
++ N +I Y + G ++ A +F++M ++++ ++N+++AG Q+ Q A+ +FD M R
Sbjct: 99 ISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER 158
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
+ ++WN ++SGY+ NG+I+EA VF MP ++VVSW ++ V + AE+ F +M
Sbjct: 159 NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP 218
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
++V SWT+M+ GL++EGRI EA +LFD MP KDV MI GY G + A LF +
Sbjct: 219 EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDE 278
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M R++ SW +I G V ++++D A F+ MPE E +W +++ G + EA
Sbjct: 279 MPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELF 338
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
P ++ + +I+ + + GEV A +VF+ M +D W+ MI L + L+
Sbjct: 339 NAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALE 398
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F M+ G P+ + SVL++C+ L LD GR+IHAQ ++ + V++ +++MY
Sbjct: 399 LFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYI 458
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CGN+ A F + D++ WNSII G A HG +AL +F M + PDD+TFVG
Sbjct: 459 KCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVG 518
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
VLSACSY G V +G F+ M+ KY ++ + HY C+VDLLGR G ++EAM+L+ ++
Sbjct: 519 VLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKM--- 575
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
+E +WGALLGACR H + + E+A ++++ LEP N+G +++L+ +Y S GR +D
Sbjct: 576 PMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVA 635
Query: 562 RIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSS-HPKFHRLRYLLNLL 610
+ M++ V K PGCSWI + H F GDSS HP+ + +L L
Sbjct: 636 ELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWL 685
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 218/422 (51%), Gaps = 10/422 (2%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
N I EA+ +FD+MP+R+ V+W M+RGY K G + A LF QMPE+++ ++ ++ GL
Sbjct: 173 NGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGL 232
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
+Q + A +FD M +DVVT +MI GY G + EA +F MP ++VVSW +I
Sbjct: 233 LQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMIT 292
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
V Q++D+A F+ M ++ SWT M+ G GR+ EA +LF+ MP K V A N M
Sbjct: 293 GYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAM 352
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTW 241
I + NG V A +F +M ++D +W +I A+ F+ M E +
Sbjct: 353 ILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNF 412
Query: 242 NSIISVL-IRNGLV-----KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFEL 294
S+ISVL + GL +E H+ L + + +V++ Y + G + A +VF+
Sbjct: 413 PSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDR 472
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+DV +WN +I G ++ LG E L+ F M SG PD+ TF VL+ CS + G
Sbjct: 473 FAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKG 532
Query: 355 RQI-HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLA 412
+I ++ K Q M+ + R G + A+ +P+ D I W +++
Sbjct: 533 LEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACR 592
Query: 413 YH 414
H
Sbjct: 593 TH 594
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+ F N++IT Y+R G I+ A + F + +IISWNSI+ G + ++A +F++
Sbjct: 95 SNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDK 154
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
M + + I++ G++S G++++ R FD M + + +T +V + G
Sbjct: 155 MS----ERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVS-----WTAMVRGYVKEG 205
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
+I EA L ++ + + G LL RI ++ ++ E+ + N G
Sbjct: 206 MISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIG---- 261
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGV 572
Y GR +A+ +F +M V
Sbjct: 262 ---GYCQVGRLVEARMLFDEMPRRNV 284
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/654 (35%), Positives = 358/654 (54%), Gaps = 66/654 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTY------ 55
+N RI A+ LFD MPQR+ V+WN MI GY N +++A LF++M +RD++++
Sbjct: 58 KNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITC 117
Query: 56 --------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
N +IAG + + AK++FD M V++VV+WNS+
Sbjct: 118 YTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSI 177
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
+SGY NG + L+ F M ++VVSWNL++ V +D A +FK++ +V SW
Sbjct: 178 LSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWV 237
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
M++G GR+ EAR LF++MP K++ +WN MI Y+ + A LF +M ++D S
Sbjct: 238 TMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVS 297
Query: 210 WKQLINGLV-------------------------------NSRRIDAAISYFKQMPETCE 238
W +ING V S R+D A F Q+
Sbjct: 298 WTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDS 357
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
WNS+I+ G EA ++ ++ SW +I Y + G++ A+++F M R
Sbjct: 358 VCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQER 417
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
+V WN +I G +N L E L F+ MK+ G PD T L ++L L++G Q+H
Sbjct: 418 NVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLH 477
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
IK V NA++TMYA+ G + A F+ + D++SWNS+I G A +G +
Sbjct: 478 HLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGK 537
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
+A+ELFE M L PD++TF G+LSAC++ G VDQG F M Y ++P+S HY CV
Sbjct: 538 EAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACV 597
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
++LLGR G ++EA+ ++ ++ S +WGALL ACRIH+N+++ + + ER++ LEP
Sbjct: 598 INLLGRVGRLEEAVEIVQGMKTVS---SAKIWGALLWACRIHHNLELAKYSAERLLALEP 654
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLS 592
N+ Y++L+ M+ GR + +R+ MKEN +K+PGCSWI+I++ H FLS
Sbjct: 655 QNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLHCFLS 708
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 162/554 (29%), Positives = 265/554 (47%), Gaps = 83/554 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R+ RI+EA +F +M +R+ VT+N MI Y KNG + NA LF+ MP+R++ ++N++IAG
Sbjct: 27 RSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAG 86
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTW--------------------------------NSM 89
+ ++ V+ A +FD M RD+ +W N++
Sbjct: 87 YLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNAL 146
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
I+GY L EA ++F M +K+VVSWN ++ +M L +F+ MG R+V SW
Sbjct: 147 IAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWN 206
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+MV+G V G + A F K+P +V +W M++G+ G + A +LF +M ++L S
Sbjct: 207 LMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVS 266
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
W +I V +ID A F +MPE +W ++I+ +R G + +A L PY NI
Sbjct: 267 WNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNI 326
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
A+ T +I GY + G + A ++F ++ RD WN MI G +E L+ F +M
Sbjct: 327 AAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEM--- 383
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
+C D+ + N MI YA+ G + A
Sbjct: 384 --------------VCKDMVSW----------------------NTMIAAYAQAGQMDKA 407
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
L F+ + +++SWNS+I G +G +AL F M+ KPD T V L A +
Sbjct: 408 LEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANL 467
Query: 450 GLVDQG-RYYFDCMK----NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR-ADGI 503
++ G + + +K N F++ ++ + + G + EA N+ EI+ D +
Sbjct: 468 AALNVGVQLHHLTIKTGFGNDLFVK------NAILTMYAKSGRVPEAENVFAEIKNKDVV 521
Query: 504 EVSPTVWGALLGAC 517
+ + G L C
Sbjct: 522 SWNSLIAGYALNGC 535
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 216/410 (52%), Gaps = 15/410 (3%)
Query: 23 TWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
T N+ I ++G ++ A+ +F QM ER++ TYN++I+ ++ + A+E+FD M R+
Sbjct: 17 TQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRN 76
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM-G 141
+V+WNSMI+GY+ N L+++A R+F M +D+ SW L+I ++ A F +
Sbjct: 77 LVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPD 136
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+D ++ G ++ EA+KLFD+M K+V +WN +++GY NG + + F+
Sbjct: 137 KQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEA 196
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M +R++ SW +++G V +D+A +FK++P +W +++S G + EA +
Sbjct: 197 MGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLF 256
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG---LGENDLGEE 318
+ P N+ SW +I Y ++ A K+F M +D W MI G +G+ E
Sbjct: 257 NEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQARE 316
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L P + A T+++ +D +I +Q I + + + N+MIT
Sbjct: 317 ILNLM-------PYKNIAAQTAMINGYLQSGRMDEANEIFSQ-ISV---RDSVCWNSMIT 365
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
YA CG AL F + D++SWN++I A G +KALE+F M+
Sbjct: 366 GYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQ 415
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/523 (27%), Positives = 257/523 (49%), Gaps = 19/523 (3%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+FT N I+ L +S ++ A VF M R++VT+NSMIS Y NG I A +F MP
Sbjct: 15 VFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
+++VSWN +I ++ + ++ A F M RD+ SWT+M+ R G + +AR+LF+ +
Sbjct: 75 RNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLL 134
Query: 172 PAK-DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
P K D N +IAGY A+ LF +M +++ SW +++G + ++ + +F
Sbjct: 135 PDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFF 194
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+ M E +WN ++ + G + A + +K P N+ SW ++ G+ G + A
Sbjct: 195 EAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARN 254
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+F M T+++ WN MI + ++ K F++M P D+ ++T+++ +
Sbjct: 255 LFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEM----PEKDSVSWTAMINGYVRVGK 310
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
L R+I + + + AMI Y + G + A FS + + D + WNS+I G
Sbjct: 311 LLQAREI----LNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITG 366
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
A+ G ++AL LF+ M D +++ +++A + AG +D+ F+ M+ + +
Sbjct: 367 YAHCGRTDEALRLFQEMVCKDM----VSWNTMIAAYAQAGQMDKALEMFNEMQERNVVS- 421
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIA 529
+ ++ + GL EA+N ++ G + T L A + VG ++
Sbjct: 422 ----WNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLH 477
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ N+ V + MY GR +A+ +FA++K V
Sbjct: 478 HLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDV 520
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 110/279 (39%), Gaps = 58/279 (20%)
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
+ + N I+ R G I+ A+ F + +I+++NS+I A +G A ELF+
Sbjct: 11 KGSYVFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFD 70
Query: 426 RM-------------------------RLTD--FKPDDITFVGVLSACSYAGLVDQGRYY 458
M RL D FK D ++ +++ + G +++ R
Sbjct: 71 LMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKAREL 130
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F+ + +K R+A ++ + L EA L +E+ + W ++L
Sbjct: 131 FNLLPDKQDTVCRNA----LIAGYAKKRLFREAKKLFDEMLVKNV----VSWNSILSGYT 182
Query: 519 IHNNIKVG----EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
+ +++G E GER N + ++ + Y+ G + A F ++ V
Sbjct: 183 KNGKMQLGLQFFEAMGER-------NVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNV-- 233
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
SW+ + LSG + + + R L N + T+
Sbjct: 234 ---VSWVTM-------LSGFAHYGRMTEARNLFNEMPTK 262
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/582 (38%), Positives = 347/582 (59%), Gaps = 6/582 (1%)
Query: 21 TVTWNVMIRGYFKNGFLDNAMCLFNQ--MPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM 78
T + + I Y +NG LD+A +F++ +P R + ++N ++A ++ + A +F+ M
Sbjct: 22 TTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKM 81
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFK 138
R+ V+WN +ISG++ NG++ EA RVF MP ++VVSW ++ V + AE F
Sbjct: 82 PQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFW 141
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
M ++V SWT+M+ GL++EGR+ +ARKLFD MP KDV A MI GY + G + A L
Sbjct: 142 HMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARAL 201
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
F +M R++ +W +++G + ++D A F+ MPE E +W +++ +G ++EA
Sbjct: 202 FDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREAS 261
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
S + P + +I+G+ GEV A +VF+ M RD W+ MI E
Sbjct: 262 SLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELE 321
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L F +M+ G + + + SVL++C L +LD G+Q+HAQ ++ +Q V++ +IT
Sbjct: 322 ALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLIT 381
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MY +CGN+ A F+ P+ D++ WNS+I G + HG E+AL +F M + PDD+T
Sbjct: 382 MYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVT 441
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
F+GVLSACSY+G V +G F+ MK KY ++P HY C+VDLLGR ++EAM L+ ++
Sbjct: 442 FIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKM 501
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
+E VWGALLGACR H + + E+A E++ +LEP N+G Y++L+ MY GR
Sbjct: 502 ---PMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWR 558
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSS-HPK 599
D + + ++K V K PGCSWI++ H+F GDS HP+
Sbjct: 559 DVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPE 600
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/450 (30%), Positives = 225/450 (50%), Gaps = 19/450 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N + EA+ +FD MP R+ V+W M+RGY +NG + A LF MP +++ ++ ++
Sbjct: 97 IKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLG 156
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
GL+Q V A+++FD M +DVV +MI GY G +DEA +F MP ++VV+W +
Sbjct: 157 GLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAM 216
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ ++D+A F+ M R+ SWT M+ G GR+ EA LFD MP K V N
Sbjct: 217 VSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCN 276
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEK 239
MI G+ NG V A +F+ M +RD +W +I A+ F++M E
Sbjct: 277 EMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLAL 336
Query: 240 TWNSIISVL--------IRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIK 290
+ S+ISVL + +G K+ H+ L + + +V++ Y + G + A +
Sbjct: 337 NFPSLISVLSVCVSLASLDHG--KQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQ 394
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
VF +DV +WN MI G ++ LGEE L F M SG PD+ TF VL+ CS
Sbjct: 395 VFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGK 454
Query: 351 LDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNSI 407
+ G ++ + +K + + ++ + R + A+ +P+ D I W ++
Sbjct: 455 VKEGLELF-ETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGAL 513
Query: 408 ICGLAYH---GYAEKALELFERMRLTDFKP 434
+ H AE A+E ++ + P
Sbjct: 514 LGACRTHMKLDLAEVAVEKLAQLEPKNAGP 543
>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/608 (37%), Positives = 358/608 (58%), Gaps = 25/608 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+RN RI EA+ LFD MPQR+ VTWN MI GY + + A LF++MP+RD+ ++N +I+
Sbjct: 78 IRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMPDRDVVSWNLMIS 137
Query: 61 GLM--QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
G + Q V+ + +FD M RD V+WN+MISGY +G +DEAL++F M ++VVSWN
Sbjct: 138 GYVSCQGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWN 197
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD--- 175
++ + ++ A +F M RD AS + +V GL++ G + EA+++ +D
Sbjct: 198 AMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRILLTSRRQDDDK 257
Query: 176 ---VQAWNLMIAGYLDNGCVGVAEDLFQKM------------HDRDLTSWKQLINGLVNS 220
V A+N+++AGY NG V A LF ++ +R++ SW +I V +
Sbjct: 258 GDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKA 317
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
R I +A F QM E +WN++IS +R ++EA ++ P + +W ++I G+
Sbjct: 318 RDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTLTWNSMISGFA 377
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G + A +F + +++ WN MI G N + + + QM G PD T +S
Sbjct: 378 QKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSS 437
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH- 399
VL++CS L LG QIH Q K ++N++ITMY+RCG I A F V +
Sbjct: 438 VLSVCSGFAALHLGMQIHQQITKTVIPDIP-INNSLITMYSRCGAIVEARTIFDEVKLQK 496
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
++ISWN++I G A+HG+A ALELFE M+ +P ITF+ VL+AC++AG V +GR +F
Sbjct: 497 EVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRMHF 556
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
M ++ ++PR H+ +VD++GR G ++EAM+L+N + E VWGALLGACR+
Sbjct: 557 KSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSM---PFEPDKAVWGALLGACRV 613
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
HNN+++ +A E +M+LEP +S Y++L MY G+ ++A + M+ N ++K+PG S
Sbjct: 614 HNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIRKQPGYS 673
Query: 580 WIQINDGG 587
W+ + G
Sbjct: 674 WVDSSHSG 681
>gi|297744236|emb|CBI37206.3| unnamed protein product [Vitis vinifera]
Length = 664
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/612 (36%), Positives = 352/612 (57%), Gaps = 12/612 (1%)
Query: 1 MRNARIQEAQNLFDKMPQRDT----VTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYN 56
+ R++EA+++ D+MP R V W ++ + KNGF+D A LF MPER++ TYN
Sbjct: 52 LSQQRLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPERNVVTYN 111
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+++G +Q + A F+ M R+VV+W S++ G G I EA +F+ MP ++VVS
Sbjct: 112 AMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNVMPERNVVS 171
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
WN ++ L+ +++ A F EM + SW +M+ G R+ EAR LFD M ++V
Sbjct: 172 WNSMLVGLIRSGQLEEARRVFNEMPVKSQVSWNVMIAGYAEHSRMEEARVLFDGMGDRNV 231
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
W MI+GY G V LFQKM +R++ SW +I G + A++ ++
Sbjct: 232 VTWTSMISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALNSMSYNTQS 291
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
C NS+I+ IR G +++A S + P + SWT++I GYF +G++ A +F M
Sbjct: 292 C----NSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNNMP 347
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
RD W VM+ G +N+L E F +M+ G SP N+TF+ +L + LD GRQ
Sbjct: 348 DRDAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQ 407
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
H +K + N++I+MYA+CG I A FS + D+ISWNS+I G ++HG
Sbjct: 408 FHCLLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRDLISWNSMIMGFSHHGL 467
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
+AL++FE M + P+ +TF+G+LSACS+AGL++QG FD M + + +QP+ HY
Sbjct: 468 TSEALKVFEAMLTSGTHPNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQPQLEHYV 527
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN-NIKVGEIAGERVME 535
C+V+LLGR G ++EA ++++ E T+WGALLG C N V A +R++E
Sbjct: 528 CMVNLLGRAGKVEEAEEFISKL---PFEPDLTIWGALLGVCGFGMINTGVARRAAKRLLE 584
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
L+P N+ +++L ++ S G+R + ++ +M GV+K PGCSWI + +VFLSGD
Sbjct: 585 LDPLNAPAHVVLCNIHASIGQRAEEGQLRKEMGLKGVRKVPGCSWILLKGEPYVFLSGDR 644
Query: 596 SHPKFHRLRYLL 607
HP+ + LL
Sbjct: 645 IHPQADEMLSLL 656
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/559 (37%), Positives = 326/559 (58%), Gaps = 34/559 (6%)
Query: 50 RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
+D++ +N I L ++ N+ A++VFD M RD V+WNS+I+GY NG DE+ R+F M
Sbjct: 45 QDVYAFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLM 104
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
P K+VVSWN +I + +R+D A YF+ M R+ ASW M++GLVR R+ EA +LF+
Sbjct: 105 PTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFE 164
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+MP ++V ++ M+ GY G + A LF M +++ SW +I+G V + + D A +
Sbjct: 165 EMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENL 224
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
F+QMP+ NI + T +I GY + G+ A
Sbjct: 225 FEQMPD-------------------------------KNIVAMTAMITGYCKEGKTDKAK 253
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
+F+ + RD+ WN MI G +N GEE LK QM + G PD++T SVLT CS L
Sbjct: 254 ILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLA 313
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
+L GR+ H +K ++ NA+ITMY +CG+I + L F + D++SWN++I
Sbjct: 314 SLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIA 373
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
A HG+ ++AL F MR +PD ITF+ +LSAC +AG V + +F+ M Y +
Sbjct: 374 AFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIXSYKIV 433
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
R H+ C+VD+L R G +++A ++ E+ E +WGALL AC +H N+K+GE+A
Sbjct: 434 XRPEHFACLVDILSRGGQVEKAYKIIQEM---PFEADCGIWGALLAACHVHLNVKLGELA 490
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
++++ELEP NSG Y++L+ +Y + G + R+ M+E GVKK+P SW++I++ H
Sbjct: 491 AKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHF 550
Query: 590 FLSGDSSHPKFHRLRYLLN 608
FL D+SHP+ HR+R L
Sbjct: 551 FLGDDASHPEIHRIRLELK 569
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 246/518 (47%), Gaps = 49/518 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R I A+ +FD+MP RDTV+WN +I GY+KNG D + LF MP +++ ++N++IAG
Sbjct: 59 RAGNIGAARQVFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAG 118
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
++ + + A + F M R+ +WN+MISG V ++EA R+F MP ++V+S+ ++
Sbjct: 119 CIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMV 178
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
++ A + F M ++V SWT+M++G V G+ EA LF++MP K++ A
Sbjct: 179 DGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTA 238
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKT 240
MI GY G A+ LF ++ RDL SW +I G + + A+ QM + +
Sbjct: 239 MITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPD 298
Query: 241 WNSIISVL--------IRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKV 291
+++ISVL ++ G ++ H + K Y + S N ++ Y + G + +
Sbjct: 299 HSTLISVLTACSSLASLQEG--RKTHVLVLKSGYESRISICNALITMYCKCGSILDSELA 356
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F + DV WN MI + + L F +M+ + PD TF S+L+ C
Sbjct: 357 FRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACG----- 411
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
HA + + N F N+MI Y + P H + ++ L
Sbjct: 412 ------HAGKVHESLNWF----NSMIXSY-----------KIVXRPEH----FACLVDIL 446
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
+ G EKA ++ + M F+ D + +L+AC V G K L+P+
Sbjct: 447 SRGGQVEKAYKIIQEM---PFEADCGIWGALLAACHVHLNVKLGEL---AAKKIVELEPQ 500
Query: 472 -SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
S Y + ++ G+ E + +R G++ P
Sbjct: 501 NSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPA 538
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 22/223 (9%)
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
RQ H +IK+ Q N I AR GNI +A F +P D +SWNSII G
Sbjct: 30 FNRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYW 89
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
+G +++ LF M + +++ +++ C +D+ YF M Q +
Sbjct: 90 KNGCFDESKRLFGLMPTKNV----VSWNSMIAGCIEDERIDEAWQYFQAMP-----QRNT 140
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEI-RADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
A + ++ L R+ ++EA L E+ R + I + V G K+GEI
Sbjct: 141 ASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGY----------AKIGEIEQA 190
Query: 532 RVME--LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
R + + N + ++ Y+ G+ ++A+ +F QM + +
Sbjct: 191 RALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNI 233
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/559 (37%), Positives = 327/559 (58%), Gaps = 34/559 (6%)
Query: 50 RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
+D++ +N I L ++ N+ A+++FD M RD V+WNS+I+GY NG DE+ R+F M
Sbjct: 45 QDVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLM 104
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
P K+VVSWN +I + +R+D A YF+ M R+ ASW M++GLVR R+ EA +LF+
Sbjct: 105 PTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFE 164
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+MP ++V ++ M+ GY G + A LF M +++ SW +I+G V + + D A +
Sbjct: 165 EMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENL 224
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
F+QMP+ NI + T +I GY + G+ A
Sbjct: 225 FEQMPD-------------------------------KNIVAMTAMITGYCKEGKTDKAK 253
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
+F+ + RD+ WN MI G +N GEE LK QM + G PD++T SVLT CS L
Sbjct: 254 ILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLA 313
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
+L GR+ H +K ++ NA+ITMY +CG+I + L F + D++SWN++I
Sbjct: 314 SLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIA 373
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
A HG+ ++AL F MR +PD ITF+ +LSAC +AG V + +F+ M Y +
Sbjct: 374 AFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIV 433
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
PR H+ C+VD+L R G +++A ++ E+ E +WGALL AC +H N+K+GE+A
Sbjct: 434 PRPEHFACLVDILSRGGQVEKAYKIIQEM---PFEADCGIWGALLAACHVHLNVKLGELA 490
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
++++ELEP NSG Y++L+ +Y + G + R+ M+E GVKK+P SW++I++ H
Sbjct: 491 AKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHF 550
Query: 590 FLSGDSSHPKFHRLRYLLN 608
FL D+SHP+ HR+R L
Sbjct: 551 FLGDDASHPEIHRIRLELK 569
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/516 (28%), Positives = 244/516 (47%), Gaps = 45/516 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R I A+ LFD+MP RDTV+WN +I GY+KNG D + LF MP +++ ++N++IAG
Sbjct: 59 RAGNIGAARQLFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAG 118
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
++ + + A + F M R+ +WN+MISG V ++EA R+F MP ++V+S+ ++
Sbjct: 119 CIEDERIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMV 178
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
++ A + F M ++V SWT+M++G V G+ EA LF++MP K++ A
Sbjct: 179 DGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTA 238
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKT 240
MI GY G A+ LF ++ RDL SW +I G + + A+ QM + +
Sbjct: 239 MITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPD 298
Query: 241 WNSIISVLIRNGLV------KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFE 293
+++ISVL + ++ H + K Y + S N ++ Y + G + + F
Sbjct: 299 HSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFR 358
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
+ DV WN MI + + L F +M+ + PD TF S+L+ C
Sbjct: 359 QIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACG------- 411
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
HA + + N F N+MI Y + P H + ++ L+
Sbjct: 412 ----HAGKVHESLNWF----NSMIESY-----------KIVPRPEH----FACLVDILSR 448
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR-S 472
G EKA ++ + M F+ D + +L+AC V G K L+P+ S
Sbjct: 449 GGQVEKAYKIIQEM---PFEADCGIWGALLAACHVHLNVKLGEL---AAKKIVELEPQNS 502
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
Y + ++ G+ E + +R G++ P
Sbjct: 503 GAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPA 538
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 23/229 (10%)
Query: 348 LPTL-DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
LP RQ H +IK+ Q N I AR GNI +A F +P D +SWNS
Sbjct: 24 LPIFHSFNRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNS 83
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
II G +G +++ LF M + +++ +++ C +D+ YF M
Sbjct: 84 IITGYWKNGCFDESKRLFGLMPTKNV----VSWNSMIAGCIEDERIDEAWQYFQAMP--- 136
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI-RADGIEVSPTVWGALLGACRIHNNIKV 525
Q +A + ++ L R+ ++EA L E+ R + I + V G K+
Sbjct: 137 --QRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGY----------AKI 184
Query: 526 GEIAGERVME--LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
GEI R + + N + ++ Y+ G+ ++A+ +F QM + +
Sbjct: 185 GEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNI 233
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/595 (36%), Positives = 346/595 (58%), Gaps = 36/595 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R ++ A+ F+ MP R T ++N ++ GYF+N D A+ +F++MP RD+ +YN +I+G
Sbjct: 29 RTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPTRDLASYNALISG 88
Query: 62 L-MQSDNVQGAKEVFDGMEV-RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
L ++ + A + VV++ S++ GYV +GL+ +A+++F MP ++ +S+ +
Sbjct: 89 LSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQLFRQMPERNHISYTV 148
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++G ++ R+D A F EM A+DV +WT M++G + GR+ EAR LFD+MP ++V +W
Sbjct: 149 LLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVDEARTLFDEMPKRNVVSW 208
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
M++GY NG V +A LF+ M +R+ SW ++ G + + RI+ A F MP+
Sbjct: 209 TAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAMLFGYIQAGRIEDAEELFNAMPD---- 264
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+P +A+ +IVG+ + G V +A VF+ M RD
Sbjct: 265 ------------------------HP---LAACNGMIVGFGQQGMVDAAKSVFDRMCERD 297
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
W+ +I +N+ E L F +M G P+ + S+LT+C+ L LD GR++H
Sbjct: 298 DGTWSAIIKAYEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGREVHG 357
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
++ + + +A+ITMY +CGN+ A F D++ WNS+I G A HG E+
Sbjct: 358 AMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEE 417
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
AL +F+ MRL PD IT++G L+ACSY G V +GR F+ M+ K ++P HY C+V
Sbjct: 418 ALHIFDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHYACMV 477
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
DLLGR GL+DEA+ L I+ +E +WGAL+GACR+H N ++ EI+ ++++ELEP
Sbjct: 478 DLLGRAGLVDEALYL---IKTMPVEPDAVIWGALMGACRMHKNAEIAEISAKKLLELEPG 534
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
N+G Y++L+ +Y S GR EDA + + + K GCSWI+ + H+F SGD
Sbjct: 535 NAGPYVLLSHIYTSSGRWEDASNMRKFISSRHLNKSLGCSWIEYDKRVHLFKSGD 589
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 90/232 (38%), Gaps = 53/232 (22%)
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD- 431
+NA I AR GN++ A F ++P+ S+N+++ G + + AL +F RM D
Sbjct: 20 ANARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPTRDL 79
Query: 432 ----------------------------FKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
+ P ++F +L GL+ F M
Sbjct: 80 ASYNALISGLSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQLFRQM- 138
Query: 464 NKYFLQPRSAHYTCVVDLLGRF---GLIDEAMNLLNEIRADGIEVSPTVWGALL-GACRI 519
P H + V LLG F G +DEA L +E+ A + W A+L G C
Sbjct: 139 ------PERNHISYTV-LLGGFLDAGRVDEARKLFDEMPAKDV----VAWTAMLSGYC-- 185
Query: 520 HNNIKVGEIAGERVM--ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
+VG + R + E+ N + + Y G+ A+++F M E
Sbjct: 186 ----QVGRVDEARTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPE 233
>gi|357438957|ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478803|gb|AES60006.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 891
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/570 (38%), Positives = 341/570 (59%), Gaps = 7/570 (1%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-HGM 109
+M N I+ L + V A++VFD M RD W +MISGY+ GLI+EA ++F
Sbjct: 44 EMKRCNYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPD 103
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
K V+ W ++ + R++ AE F EM R+V SW M++G R GR EA LF
Sbjct: 104 AQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFG 163
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+MP ++V +WN ++ G + AE LF +M +RD+ SW ++ GL + R+DAA
Sbjct: 164 RMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREV 223
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
F +MP +WN++I+ +NG EA E+ P ++ SW ++ G+ + G++ A
Sbjct: 224 FDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAE 283
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES-GPSPDNATFTSVLTICSDL 348
++F M ++V W M+ G ++ L EE LK F +M+ + G P TF +VL CSDL
Sbjct: 284 QLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDL 343
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS-VPIH-DIISWNS 406
L G+QIH K + T V +A+I MY++CG+ A F + H D+I+WN
Sbjct: 344 AGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNG 403
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
+I A+HGY +A+ LF +M+ F+ +D+T+VG+L+ACS+AGL D+G YFD +
Sbjct: 404 MIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNR 463
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
++Q R HYTC++DL GR G +DEA+N++ + G EVS ++WGALL C +H N +G
Sbjct: 464 YIQVREDHYTCLIDLCGRAGRLDEALNIIEGL---GKEVSLSLWGALLAGCSVHGNADIG 520
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
++ ++V+++EP N+ YL+ + MY S G RE+A + +MK+ G+KK+PGCSWI + +
Sbjct: 521 KLVADKVLKMEPENADTYLLASNMYASVGMREEAANVRMKMKKKGLKKQPGCSWIDVGNT 580
Query: 587 GHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
VF+ D SH +F L+YLL LHT++++
Sbjct: 581 VQVFVVNDKSHSQFEMLKYLLLDLHTKMKK 610
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 238/465 (51%), Gaps = 51/465 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-PERDMFTYNTVIA 60
R ++ EA+ +FD+M +RD+ W MI GY K G ++ A LF++ ++ + + +++
Sbjct: 57 REGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVS 116
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ + ++ A+ +F+ M VR+VV+WN+MI GY NG EAL +F MP ++VVSWN V
Sbjct: 117 GYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTV 176
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ AL +C R+D AE F EM RDV SWT MV GL + GR+ AR++FDKMP ++V +WN
Sbjct: 177 MTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWN 236
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MIAGY NG A LF++M +RD+ SW ++ G + + ++ A F MP+ T
Sbjct: 237 AMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVIT 296
Query: 241 WNSIISVLIRNGLVKEA---------------------------------------HSYL 261
W ++++ +++GL +EA H +
Sbjct: 297 WTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMI 356
Query: 262 EKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFE--LMTTRDVTVWNVMIFGLGENDLGEE 318
K + + ++ Y + G+ A K+F+ L D+ WN MI + G E
Sbjct: 357 SKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNE 416
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS----N 374
+ F +M+E G ++ T+ +LT CS D G + + +K N++ V
Sbjct: 417 AINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLK---NRYIQVREDHYT 473
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAE 418
+I + R G + AL + +S W +++ G + HG A+
Sbjct: 474 CLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLAGCSVHGNAD 518
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 60/241 (24%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMF-----TY 55
++N + A+ LF MPQ++ +TW M+ GY ++G + A+ LFN+M D T+
Sbjct: 274 IQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTF 333
Query: 56 NTV------IAGLMQSDNVQG-----------------------------AKEVF-DGME 79
TV +AGL + + AK++F DG+
Sbjct: 334 VTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLS 393
Query: 80 VR-DVVTWNSMISGYVCNGLIDEALRVFH-----GMPLKDVVSWNLVIGALVNCQRMDLA 133
D++ WN MI+ Y +G +EA+ +F+ G DV +G L C L
Sbjct: 394 GHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVT----YVGLLTACSHAGLF 449
Query: 134 E---SYFKEMGARDVAS-----WTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIA 184
+ YF E+ +T +++ R GR+ EA + + + + + W ++A
Sbjct: 450 DEGFKYFDELLKNRYIQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLA 509
Query: 185 G 185
G
Sbjct: 510 G 510
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/605 (36%), Positives = 348/605 (57%), Gaps = 67/605 (11%)
Query: 16 MPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-RDMFTYNTVIAGLMQSDNVQGAKEV 74
M +RD VTW +I GY K G + +A LF+++ +D+ T+ +++G ++ ++ A+ +
Sbjct: 1 MHERDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERL 60
Query: 75 FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAE 134
F+ M V++VV+WN+MI GY N +D+A+ VF M +++VSWN VI ALV C R++ A
Sbjct: 61 FEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEAR 120
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
F EM RDV SWT MV GL R GR+ EARK+FD+MP ++V +WN M+ GY N +
Sbjct: 121 RRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDE 180
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A DLF++M +R+L+SW +I G + + + A F +MPE
Sbjct: 181 AFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPE------------------- 221
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
N+ SWT +I GY + GE SA+KVF M
Sbjct: 222 ------------KNVVSWTTMITGYVQEGESESALKVFVEM------------------- 250
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
+K+ G P+ TF +VL CSD+ L G+Q+H K T V++
Sbjct: 251 -----------IKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVAS 299
Query: 375 AMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
A++ MY++CG + A F V I D++ WN +I A+HG +A+ELFE M+ F
Sbjct: 300 ALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGF 359
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
KP+D+++V +LSACS+AGLVD+G YFD + +Q R H+ C+VDL GR G + EA
Sbjct: 360 KPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQLREDHHACLVDLCGRAGRLKEAY 419
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
+ + ++ G + S ++WG LL C H ++++G++A + + + +P N+G YL+L+ +Y
Sbjct: 420 DFIKQL---GTKASSSIWGGLLAGCNAHGDLEIGQLAAKELEKEDPENAGTYLLLSNIYA 476
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
S + +A R+ +MKE G+KK+PGCSWI++ + HVFL+ D SH + + + L++ +H
Sbjct: 477 SGRKWREASRVRLKMKEKGLKKQPGCSWIEVGNRVHVFLARDKSHYQSNLIYSLVHDIHA 536
Query: 613 EIERE 617
E++ E
Sbjct: 537 EMKAE 541
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 212/423 (50%), Gaps = 28/423 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R RI+EA+ LF+ MP ++ V+WN MI GY KN +D A+ +F +M ER+M ++N VIA
Sbjct: 49 VRLKRIEEAERLFEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIA 108
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
L+Q V+ A+ FD M RDV++W +M+ G +G +DEA +VF MP ++VVSWN +
Sbjct: 109 ALVQCGRVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAM 168
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ R+D A F+ M R+++SW M+ G ++ G + ARK+F++MP K+V +W
Sbjct: 169 VTGYAKNMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWT 228
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MI GY+ G A +F +M + +G F + C
Sbjct: 229 TMITGYVQEGESESALKVFVEM----------IKDGGARPNE-----GTFVNVLGAC--- 270
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFE--LMTT 297
S + G ++ H + K Y + + ++ Y + GE+ A K+F+ +++
Sbjct: 271 -----SDMAGLGEGQQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVVISQ 325
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
RD+ +WN MI + G E ++ F M+ G P++ ++ +L+ CS +D G
Sbjct: 326 RDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNY 385
Query: 358 HAQAIKIARNQFTTVSNA-MITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHG 415
+ + Q +A ++ + R G ++ A + S W ++ G HG
Sbjct: 386 FDELGRDNSIQLREDHHACLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNAHG 445
Query: 416 YAE 418
E
Sbjct: 446 DLE 448
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/598 (35%), Positives = 349/598 (58%), Gaps = 42/598 (7%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME-VRDV 83
N +I K G + A +F +MP+RD+ ++ VI G ++ ++ AK +FD + +++V
Sbjct: 70 NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNV 129
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
VTW +++SGYV I+EA R+F MP+K+V+SWN +I +D A F++M R
Sbjct: 130 VTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMPER 189
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
+V SW ++ ++ R+ EA++LF++MP +DV +W M+AG NG + A LF KM
Sbjct: 190 NVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMP 249
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEK 263
R++ SW +I G + R+D A F+QMPE +WN++I+ I+NG ++ A + K
Sbjct: 250 VRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYK 309
Query: 264 YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
N+ +WT VI G+ + G EE LK F
Sbjct: 310 MSNKNVVTWTAVISGHVQDGR-------------------------------SEEALKIF 338
Query: 324 VQMKESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
+M+ + P+ TF SVL CS L L G+QIH K + V +A+I MY++
Sbjct: 339 SEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 398
Query: 383 CGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
CG ++ A + + S+ D++SWN +I A+HG+ KA+ LF+ M+ F+PD++T++
Sbjct: 399 CGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 458
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
+LSACS+AGLVD+G F+ + ++ R H+TC+VDL GR G + EA + +
Sbjct: 459 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIK---- 514
Query: 501 DGIEVSP--TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
G+EV P +VW ALL C +H +I +G++ E+++E EP N+G YL+L+ +Y S G+
Sbjct: 515 -GLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWR 573
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+A + +MK+ G+KK+PGCSWI++ + HVF+ GD+SH +F + LL+ LHT++++
Sbjct: 574 EAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKK 631
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 147/477 (30%), Positives = 247/477 (51%), Gaps = 60/477 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-RDMFTYNTVIA 60
+ +I EA+ +F++MP RD V+W +I GY K G ++ A LF++ +++ T+ +++
Sbjct: 78 KEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVS 137
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ + ++ A+ +FD M V++V++WN+MI GY G ID+AL +F MP ++VVSWN V
Sbjct: 138 GYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTV 197
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV---- 176
I A + +R+D A+ F M RDV SWT MV GL + GRI +AR LFDKMP ++V
Sbjct: 198 ITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWN 257
Query: 177 ---------------------------QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+WN MI G++ NG + A D F KM ++++ +
Sbjct: 258 TMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVT 317
Query: 210 WKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLIRNGLVKEA---HSYL 261
W +I+G V R + A+ F +M + E T+ S++ + + E H +
Sbjct: 318 WTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQII 377
Query: 262 EKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFE--LMTTRDVTVWNVMIFGLGENDLGEE 318
K Y +A + ++ Y + GE+ A K+F+ + RDV WN MI + G +
Sbjct: 378 SKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHK 437
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ-----IHAQAIKIARNQFTTVS 373
+ F +M+ G PDN T+ ++L+ CS +D G + + ++IK+ + FT
Sbjct: 438 AISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFT--- 494
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGY-------AEKALE 422
++ ++ R G +Q A + + S W +++ G HG+ AEK LE
Sbjct: 495 -CLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLE 550
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 220/474 (46%), Gaps = 51/474 (10%)
Query: 127 CQRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
CQ + S ++ A +VA ++ L +EG+I EAR++F++MP +DV +W +I G
Sbjct: 47 CQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITG 106
Query: 186 YLDNGCVGVAEDLFQKMHD-RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI 244
Y+ G + A+ LF + +++ +W L++G V RI+ A F MP +WN++
Sbjct: 107 YIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTM 166
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
I R G + +A EK P N+ SW VI + + V A ++F M RDV W
Sbjct: 167 IEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWT 226
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
M+ GL +N ++ F +M P + ++ +++ + LD ++ Q +
Sbjct: 227 TMVAGLSKNGRIDDARLLFDKM----PVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPER 282
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+ + N MIT + + G ++ A+ F + ++++W ++I G G +E+AL++F
Sbjct: 283 ELSSW----NTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIF 338
Query: 425 ERMRLT-DFKPDDITFVGVLSACSYAGLVDQGR-----------------------YYFD 460
M+ + KP++ TFV VL ACS + +G+ Y
Sbjct: 339 SEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 398
Query: 461 C----MKNKYFLQPRSAHYTCV-----VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
C + K F H V + G +A++L +E++A G +
Sbjct: 399 CGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 458
Query: 512 ALLGACR----IHNNIKVGE-IAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
ALL AC + +K+ E + +R ++L ++ + L +++ GR ++A
Sbjct: 459 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDH---FTCLVDLFGRAGRLQEA 509
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 162/330 (49%), Gaps = 52/330 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ R+ EAQ LF++MP+RD ++W M+ G KNG +D+A LF++MP R++ ++NT+I
Sbjct: 202 MQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMII 261
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G Q+ + A ++F+ M R++ +WN+MI+G++ NG ++ A+ F+ M K+VV+W V
Sbjct: 262 GYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAV 321
Query: 121 IGALVNCQRMDLAESYFKEMGARD------------------------------VASWTI 150
I V R + A F EM A + + S T+
Sbjct: 322 ISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTV 381
Query: 151 ----------MVNGLVREGRIVEARKLFD--KMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
++N + G + ARK+FD + +DV +WN MIA Y +G A L
Sbjct: 382 YQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISL 441
Query: 199 FQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLI 249
F +M D ++ L++ ++ +D + F+ + + E + ++ +
Sbjct: 442 FDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFG 501
Query: 250 RNGLVKEAHSYLEKYPYSNIAS-WTNVIVG 278
R G ++EA +++ AS W ++ G
Sbjct: 502 RAGRLQEAFDFIKGLEVKPSASVWAALLAG 531
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 97/233 (41%), Gaps = 21/233 (9%)
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
N+ +S + C +P +I + + N SN +IT + G I A F
Sbjct: 37 NSILSSQFSTCQVVP------KISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFE 90
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+P D++SW ++I G G E+A LF+R D + +T+ ++S +++
Sbjct: 91 EMPDRDVVSWTAVITGYIKCGMIEEAKTLFDR---NDAIKNVVTWTALVSGYVRWNRIEE 147
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
R FD M K + + +++ R G ID+A++L ++ + TV A +
Sbjct: 148 ARRLFDAMPVKNVIS-----WNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFM 202
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
R+ A E + + + + GR +DA+ +F +M
Sbjct: 203 QRRRVDE-------AQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKM 248
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/611 (35%), Positives = 349/611 (57%), Gaps = 36/611 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R +I EA+ LFD + +WN M+ GYF N
Sbjct: 29 RIGKIHEARKLFDSCDSKSISSWNSMVAGYFAN--------------------------- 61
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
LM D A+++FD M R++++WN ++SGY+ NG IDEA +VF MP ++VVSW ++
Sbjct: 62 LMPRD----ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALV 117
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
V+ ++D+AES F +M ++ SWT+M+ G +++GRI +A KL++ +P KD A
Sbjct: 118 KGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTS 177
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
MI G G V A ++F +M +R + +W ++ G + R+D A F MPE E +W
Sbjct: 178 MIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSW 237
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
S++ ++NG +++A E P + + +I G + GE+ A +VF+ M R+
Sbjct: 238 TSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
W +I N E L F+ M++ G P T S+L++C+ L +L G+Q+HAQ
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQL 357
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
++ + V++ ++TMY +CG + + L F P DII WNSII G A HG E+AL
Sbjct: 358 VRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 422 ELFERMRLT-DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
++F M L+ KP+++TFV LSACSYAG+V++G ++ M++ + ++P +AHY C+VD
Sbjct: 418 KVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVD 477
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
+LGR G +EAM +++ + +E VWG+LLGACR H+ + V E ++++E+EP N
Sbjct: 478 MLGRAGRFNEAMEMIDSM---TVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPEN 534
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD-SSHPK 599
SG Y++L+ MY S GR D + MK V+K PGCSW ++ + H F G +SHP+
Sbjct: 535 SGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPE 594
Query: 600 FHRLRYLLNLL 610
+ +L+ L
Sbjct: 595 QESILKILDEL 605
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 236/470 (50%), Gaps = 21/470 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+N I EA+ +FD MP+R+ V+W +++GY NG +D A LF +MPE++ ++ ++
Sbjct: 90 MKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLI 149
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +Q + A ++++ + +D + SMI G G +DEA +F M + V++W +
Sbjct: 150 GFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTM 209
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ R+D A F M + SWT M+ G V+ GRI +A +LF+ MP K V A N
Sbjct: 210 VTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACN 269
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN-GLVNSRRIDAAISYFKQMPETCEK 239
MI+G G + A +F M +R+ SW+ +I N ++A + +
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 329
Query: 240 TWNSIISVL--------IRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIK 290
T+ ++IS+L + +G K+ H+ L + + ++ + ++ Y + GE+ +
Sbjct: 330 TFPTLISILSVCASLASLHHG--KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKL 387
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS-PDNATFTSVLTICSDLP 349
+F+ ++D+ +WN +I G + LGEE LK F +M SG + P+ TF + L+ CS
Sbjct: 388 IFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNA-MITMYARCGNIQSALLEFSSVPIH-DIISWNSI 407
++ G +I+ + + T A M+ M R G A+ S+ + D W S+
Sbjct: 448 MVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ H + A F +L + +P++ + +L + YA QGR+
Sbjct: 508 LGACRTHSQLDVA--EFCAKKLIEIEPEN-SGTYILLSNMYAS---QGRW 551
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/598 (35%), Positives = 348/598 (58%), Gaps = 42/598 (7%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME-VRDV 83
N +I K G + A +F +MP+RD+ ++ VI G ++ ++ AK +FD + +++V
Sbjct: 70 NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNV 129
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
VTW +++SGYV I+EA R+F MP+K+V+SWN +I +D A F+ M R
Sbjct: 130 VTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPER 189
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
+V SW ++ ++ R+ EA++LF++MP +DV +W M+AG NG + A LF KM
Sbjct: 190 NVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMP 249
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEK 263
R++ SW +I G + R+D A F+QMPE +WN++I+ I+NG ++ A + K
Sbjct: 250 VRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYK 309
Query: 264 YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
N+ +WT VI G+ + G EE LK F
Sbjct: 310 MSNKNVVTWTAVISGHVQDGR-------------------------------SEEALKIF 338
Query: 324 VQMKESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
+M+ + P+ TF SVL CS L L G+QIH K + V +A+I MY++
Sbjct: 339 SEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 398
Query: 383 CGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
CG ++ A + + S+ D++SWN +I A+HG+ KA+ LF+ M+ F+PD++T++
Sbjct: 399 CGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 458
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
+LSACS+AGLVD+G F+ + ++ R H+TC+VDL GR G + EA + +
Sbjct: 459 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIK---- 514
Query: 501 DGIEVSP--TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
G+EV P +VW ALL C +H +I +G++ E+++E EP N+G YL+L+ +Y S G+
Sbjct: 515 -GLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWR 573
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+A + +MK+ G+KK+PGCSWI++ + HVF+ GD+SH +F + LL+ LHT++++
Sbjct: 574 EAAGVRMKMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKK 631
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 147/477 (30%), Positives = 247/477 (51%), Gaps = 60/477 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-RDMFTYNTVIA 60
+ +I EA+ +F++MP RD V+W +I GY K G ++ A LF++ +++ T+ +++
Sbjct: 78 KEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVS 137
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ + ++ A+ +FD M V++V++WN+MI GY G ID+AL +F MP ++VVSWN V
Sbjct: 138 GYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTV 197
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV---- 176
I A + +R+D A+ F M RDV SWT MV GL + GRI +AR LFDKMP ++V
Sbjct: 198 ITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWN 257
Query: 177 ---------------------------QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+WN MI G++ NG + A D F KM ++++ +
Sbjct: 258 TMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVT 317
Query: 210 WKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLIRNGLVKEA---HSYL 261
W +I+G V R + A+ F +M + E T+ S++ + + E H +
Sbjct: 318 WTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQII 377
Query: 262 EKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFE--LMTTRDVTVWNVMIFGLGENDLGEE 318
K Y +A + ++ Y + GE+ A K+F+ + RDV WN MI + G +
Sbjct: 378 SKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHK 437
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ-----IHAQAIKIARNQFTTVS 373
+ F +M+ G PDN T+ ++L+ CS +D G + + ++IK+ + FT
Sbjct: 438 AISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFT--- 494
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGY-------AEKALE 422
++ ++ R G +Q A + + S W +++ G HG+ AEK LE
Sbjct: 495 -CLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLE 550
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 219/474 (46%), Gaps = 51/474 (10%)
Query: 127 CQRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
CQ + S ++ A +VA ++ L +EG+I EAR++F++MP +DV +W +I G
Sbjct: 47 CQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITG 106
Query: 186 YLDNGCVGVAEDLFQKMHD-RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI 244
Y+ G + A+ LF + +++ +W L++G V RI+ A F MP +WN++
Sbjct: 107 YIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTM 166
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
I R G + +A E P N+ SW VI + + V A ++F M RDV W
Sbjct: 167 IEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWT 226
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
M+ GL +N ++ F +M P + ++ +++ + LD ++ Q +
Sbjct: 227 TMVAGLSKNGRIDDARLLFDKM----PVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPER 282
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+ + N MIT + + G ++ A+ F + ++++W ++I G G +E+AL++F
Sbjct: 283 ELSSW----NTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIF 338
Query: 425 ERMRLT-DFKPDDITFVGVLSACSYAGLVDQGR-----------------------YYFD 460
M+ + KP++ TFV VL ACS + +G+ Y
Sbjct: 339 SEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSK 398
Query: 461 C----MKNKYFLQPRSAHYTCV-----VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
C + K F H V + G +A++L +E++A G +
Sbjct: 399 CGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYI 458
Query: 512 ALLGACR----IHNNIKVGE-IAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
ALL AC + +K+ E + +R ++L ++ + L +++ GR ++A
Sbjct: 459 ALLSACSHAGLVDEGLKLFENLVRDRSIKLREDH---FTCLVDLFGRAGRLQEA 509
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 162/330 (49%), Gaps = 52/330 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ R+ EAQ LF++MP+RD ++W M+ G KNG +D+A LF++MP R++ ++NT+I
Sbjct: 202 MQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMII 261
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G Q+ + A ++F+ M R++ +WN+MI+G++ NG ++ A+ F+ M K+VV+W V
Sbjct: 262 GYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAV 321
Query: 121 IGALVNCQRMDLAESYFKEMGARD------------------------------VASWTI 150
I V R + A F EM A + + S T+
Sbjct: 322 ISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTV 381
Query: 151 ----------MVNGLVREGRIVEARKLFD--KMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
++N + G + ARK+FD + +DV +WN MIA Y +G A L
Sbjct: 382 YQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISL 441
Query: 199 FQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLI 249
F +M D ++ L++ ++ +D + F+ + + E + ++ +
Sbjct: 442 FDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFG 501
Query: 250 RNGLVKEAHSYLEKYPYSNIAS-WTNVIVG 278
R G ++EA +++ AS W ++ G
Sbjct: 502 RAGRLQEAFDFIKGLEVKPSASVWAALLAG 531
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 21/233 (9%)
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
N+ +S + C +P +I + + N SN +IT + G I A F
Sbjct: 37 NSILSSQFSTCQVVP------KISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFE 90
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+P D++SW ++I G G E+A LF+R D + +T+ ++S +++
Sbjct: 91 EMPDRDVVSWTAVITGYIKCGMIEEAKTLFDR---NDAIKNVVTWTALVSGYVRWNRIEE 147
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
R FD M K + + +++ R G ID+A++L + + TV A +
Sbjct: 148 ARRLFDAMPVKNVIS-----WNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFM 202
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
R+ A E + + + + GR +DA+ +F +M
Sbjct: 203 QRRRVDE-------AQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKM 248
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/596 (36%), Positives = 344/596 (57%), Gaps = 38/596 (6%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR-DV 83
N+ I + G +D A +F +MPERD+ + T+I G ++ ++ A+++FD + + +V
Sbjct: 5 NLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNV 64
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
VTW +M++GY+ + EA R+F+ MPL++VVSWN ++ A F+ M R
Sbjct: 65 VTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPER 124
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
+V SW ++ LV+ GRI +A++LFD+M +DV +W M+AG NG V A LF +M
Sbjct: 125 NVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQMP 184
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEK 263
R++ SW +I G +RR+D A+ F++MPE +WN++I+ I+NG + A +
Sbjct: 185 VRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGE 244
Query: 264 YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
N+ +WT ++ GY + G L EE L+ F
Sbjct: 245 MQEKNVITWTAMMTGYVQHG-------------------------------LSEEALRVF 273
Query: 324 VQMKESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
++M + P+ TF +VL CSDL L G+QIH K T V +A+I MY++
Sbjct: 274 IKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSK 333
Query: 383 CGNIQSALLEFSS--VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
CG + +A F + D+ISWN +I A+HGY ++A+ LF M+ +D+TFV
Sbjct: 334 CGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAINLFNEMQELGVCANDVTFV 393
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
G+L+ACS+ GLV++G YFD + +Q R HY C+VDL GR G + EA N++ +
Sbjct: 394 GLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHYACLVDLCGRAGRLKEASNIIEGL-- 451
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
G EV TVWGALL C +H N +G++ E+++++EP N+G Y +L+ MY S G+ ++A
Sbjct: 452 -GEEVPLTVWGALLAGCNVHGNADIGKLVAEKILKIEPQNAGTYSLLSNMYASVGKWKEA 510
Query: 561 KRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+ +MK+ G+KK+PGCSWI++ + VF+ GD H ++ L +LL+ LHT++++
Sbjct: 511 ANVRMRMKDMGLKKQPGCSWIEVGNTVQVFVVGDKPHSQYEPLGHLLHDLHTKMKK 566
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 243/465 (52%), Gaps = 51/465 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-PERDMFTYNTVIA 60
R I A+ +F++MP+RD W MI GY K G + A LF++ ++++ T+ ++
Sbjct: 13 REGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNVVTWTAMVN 72
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ + V+ A+ +F M +R+VV+WN+M+ GY NGL +AL +F MP ++VVSWN +
Sbjct: 73 GYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTI 132
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I ALV C R++ A+ F +M RDV SWT MV GL + GR+ +AR LFD+MP ++V +WN
Sbjct: 133 ITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWN 192
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MI GY N + A LFQ+M +RD+ SW +I G + + ++ A F +M E T
Sbjct: 193 AMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVIT 252
Query: 241 WNSIISVLIRNGLVKEA---------------------------------------HSYL 261
W ++++ +++GL +EA H +
Sbjct: 253 WTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMI 312
Query: 262 EKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFE--LMTTRDVTVWNVMIFGLGENDLGEE 318
K + + + ++ Y + GE+ +A K+F+ L++ RD+ WN MI + G+E
Sbjct: 313 SKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKE 372
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA-MI 377
+ F +M+E G ++ TF +LT CS ++ G + + +K Q A ++
Sbjct: 373 AINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHYACLV 432
Query: 378 TMYARCGNIQSA--LLE--FSSVPIHDIISWNSIICGLAYHGYAE 418
+ R G ++ A ++E VP + W +++ G HG A+
Sbjct: 433 DLCGRAGRLKEASNIIEGLGEEVP---LTVWGALLAGCNVHGNAD 474
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 150/362 (41%), Gaps = 55/362 (15%)
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFEL---- 294
K N IS L R G + A E+ P +I WT +I GY + G + A K+F+
Sbjct: 2 KRCNLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAK 61
Query: 295 ----------------------------MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
M R+V WN M+ G N L ++ L F +M
Sbjct: 62 KNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRM 121
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGN 385
E N T++ + GR AQ + VS M+ A+ G
Sbjct: 122 PERNVVSWNTIITAL---------VQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGR 172
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
++ A F +P+ +++SWN++I G A + ++AL+LF+RM D + G +
Sbjct: 173 VEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQ- 231
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
G +++ F M+ K + +T ++ + GL +EA+ + ++ A E+
Sbjct: 232 ---NGELNRAEKLFGEMQEKNVIT-----WTAMMTGYVQHGLSEEALRVFIKMLATN-EL 282
Query: 506 SPT--VWGALLGACRIHNNIKVGEIAGERVME-LEPNNSGVYLILTEMYLSCGRREDAKR 562
P + +LGAC + G+ + + + + +++ V L MY CG A++
Sbjct: 283 KPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARK 342
Query: 563 IF 564
+F
Sbjct: 343 MF 344
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 52/237 (21%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTV-- 58
++N + A+ LF +M +++ +TW M+ GY ++G + A+ +F +M + NT
Sbjct: 230 IQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTF 289
Query: 59 ---------IAGLMQSDNV-----------------------------QGAKEVFDG--M 78
+AGL + + A+++FD +
Sbjct: 290 VTVLGACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLL 349
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQRMDLAE--- 134
RD+++WN MI+ Y +G EA+ +F+ M V + ++ +G L C L E
Sbjct: 350 SQRDLISWNGMIAAYAHHGYGKEAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGF 409
Query: 135 SYFKE-MGARDVA----SWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAG 185
YF E + R + + +V+ R GR+ EA + + + + + W ++AG
Sbjct: 410 KYFDEILKNRSIQLREDHYACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAG 466
>gi|297734691|emb|CBI16742.3| unnamed protein product [Vitis vinifera]
Length = 674
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/591 (36%), Positives = 341/591 (57%), Gaps = 11/591 (1%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D N+ I + G + A LF++MP D +Y +I ++++ ++ A+++F M
Sbjct: 68 DIYNCNIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQTMP 127
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKE 139
R +V ++MI GY GL+D A +VF M +V SW +I ++ A F +
Sbjct: 128 DRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQ 187
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
M A++V SWT MV G R G I +AR +F++MP K+ +W M+ Y+DNG A LF
Sbjct: 188 MPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALKLF 247
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
+M R+L SW +I+G ++ +R++ A F MP +W ++S L RNG K A
Sbjct: 248 HEMPQRNLYSWNTMISGCLDGKRVNEAFKLFHLMPLRNAVSWTIMVSGLARNGFTKLARE 307
Query: 260 YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
Y ++ P +IA+W +I Y + + A ++F LMT R++ WN MI G + E
Sbjct: 308 YFDQMPNKDIAAWNAMITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEA 367
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
+K + M S P+ T T +LT C + L Q HA AI + T++SNA+ITM
Sbjct: 368 MKHLILMLRSCIRPNETTMTIILTSCWGMLEL---MQAHALAIVVGCECETSLSNALITM 424
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y+R G+I S+ + F S+ D++SW +++ YHG+ + AL +F M + KPD+ITF
Sbjct: 425 YSRIGDISSSRIAFESLKAKDVVSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITF 484
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL---LN 496
VGVLSACS+AGLV +G+ FD M Y L+PR+ HY+C+VD+LGR G + EAM++ +
Sbjct: 485 VGVLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVHEAMDVVWKMP 544
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
E DG V GALLGACR+H N+++ + G++++EL+PN+SG Y++L ++ + G
Sbjct: 545 ECERDG-----AVLGALLGACRLHGNVEMADYIGQKLIELQPNSSGGYVLLANVFAARGN 599
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
++ + +MK+ V+K PG S I++ H F +GD SHP+ + LL
Sbjct: 600 WDEFAEVRKKMKDRNVRKVPGFSQIEVKGKCHAFFAGDKSHPQVEEIYELL 650
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 211/402 (52%), Gaps = 28/402 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ AQ +FD M + +W +I GYF++G + A LF+QMP +++ ++ T++ G ++
Sbjct: 147 MDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARN 206
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
+ A+ VF+ M ++ ++W +M+ YV NG DEAL++FH MP +++ SWN +I +
Sbjct: 207 GLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCL 266
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
+ +R++ A F M R+ SWTIMV+GL R G AR+ FD+MP KD+ AWN MI
Sbjct: 267 DGKRVNEAFKLFHLMPLRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITA 326
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
Y+D + A +LF M +R++ +W +I+G R A+ + M +C + + +
Sbjct: 327 YVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTM 386
Query: 246 SVLIRN--GLVK--EAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDV 300
++++ + G+++ +AH+ S +N ++ Y +G++ S+ FE + +DV
Sbjct: 387 TIILTSCWGMLELMQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKDV 446
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W M+ + G+ L F M +SG PD TF VL+ CS HA
Sbjct: 447 VSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACS-----------HAG 495
Query: 361 AIKIARNQFTTVSNA------------MITMYARCGNIQSAL 390
+K + F ++S A ++ + R G + A+
Sbjct: 496 LVKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVHEAM 537
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/526 (24%), Positives = 220/526 (41%), Gaps = 82/526 (15%)
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKE 139
V D+ N IS G + A ++F MP D VS+ +I A + + AE F+
Sbjct: 66 VLDIYNCNIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQT 125
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
M R + + + M++G + G + A+K+FD M +V +W +I+GY +G V A LF
Sbjct: 126 MPDRTIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLF 185
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
+M +++ SW ++ G + ID A S F QMPE +W +++ + NG EA
Sbjct: 186 DQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALK 245
Query: 260 YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+ P N+ SW +I G + V A K+F LM R+ W +M+ GL N +
Sbjct: 246 LFHEMPQRNLYSWNTMISGCLDGKRVNEAFKLFHLMPLRNAVSWTIMVSGLARNGFTKLA 305
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
++F QM P+ D A + NAMIT
Sbjct: 306 REYFDQM----PNKDIAAW-----------------------------------NAMITA 326
Query: 380 YA-RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
Y C ++++ L F+ + +I++WN++I G A H +A++ M + +P++ T
Sbjct: 327 YVDECLIVEASEL-FNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETT 385
Query: 439 FVGVLSAC--------------------------------SYAGLVDQGRYYFDCMKNKY 466
+L++C S G + R F+ +K K
Sbjct: 386 MTIILTSCWGMLELMQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKD 445
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
+ +T ++ G D A+++ + G + + +L AC +K G
Sbjct: 446 VVS-----WTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKG 500
Query: 527 EI---AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
+ + R LEP Y L ++ G+ +A + +M E
Sbjct: 501 QKLFDSMSRAYGLEPRAEH-YSCLVDILGRAGQVHEAMDVVWKMPE 545
>gi|242048970|ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
gi|241925606|gb|EER98750.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
Length = 686
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/599 (35%), Positives = 330/599 (55%), Gaps = 51/599 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MR R+ +A+ LF M +R T T+N M+ GY NG L A+ F +P D F+YNT++
Sbjct: 46 MRAGRVPDAERLFAAMSRRSTSTYNAMLGGYAANGRLTLALSFFRSIPRPDSFSYNTLLH 105
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
L S ++ A+ +FD M V+D V++N MIS + +GL+ A F P KD VSWN +
Sbjct: 106 ALGVSSSLADARALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGM 165
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A + R+ A F D SW ++ G V+ +I EA+K+F++MP +DV +WN
Sbjct: 166 LAAYIRNGRIQEARDLFDSRTEWDAISWNALMAGYVQCSQIEEAQKMFNRMPQRDVVSWN 225
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
M++G+ G + A LF RD+ +W +++G + ++ A F MPE +
Sbjct: 226 TMVSGHARRGDMAEARRLFDVAPIRDVFTWTAVVSGYAQNGMLEEAKRVFDAMPEKNAVS 285
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WN++++ ++ +++EA + P N+ASW ++ GY + G + A +F++M +D
Sbjct: 286 WNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFDMMPQKDA 345
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W M+ + EE L+ F +M GR
Sbjct: 346 VSWAAMLAAYSQGGFSEETLQLFKEM---------------------------GR----- 373
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
MY +CGN++ A F + DI+SWN++I G A HG+ ++A
Sbjct: 374 ----------------CAMYFKCGNMEEAHSAFEEMEERDIVSWNTMIAGYARHGFGKEA 417
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
LE+F+ MR T KPDDIT VGVL+ACS++GLV++G YF M + + + HYTC++D
Sbjct: 418 LEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVTAKPEHYTCMID 477
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR G +DEA+NL+ ++ E T+WGALLGA RIH N ++G A E++ ELEP N
Sbjct: 478 LLGRAGRLDEAVNLMKDM---PFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPEN 534
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
+G+Y++L+ +Y S G+ D ++ M E GVKK PG SWI++ + H F GDS HP+
Sbjct: 535 AGMYVLLSNIYASSGKWRDVDKMRLMMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPE 593
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/539 (37%), Positives = 320/539 (59%), Gaps = 3/539 (0%)
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF 137
M VRD VT+N MIS + +GL+ A F P KD VSWN ++ A V R++ A F
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF 60
Query: 138 KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
DV SW +++G V+ G++ EAR+LFD+MP +DV +WN+M++GY G + A
Sbjct: 61 NSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARR 120
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
LF RD+ +W +++G + ++ A F MPE +WN++++ I+ ++ EA
Sbjct: 121 LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEA 180
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
P N+ASW ++ GY + G + A VF+ M +D W M+ + E
Sbjct: 181 KELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSE 240
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E L+ F++M G + + F VL+ C+D+ L+ G Q+H + I+ V NA++
Sbjct: 241 ETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALL 300
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
MY +CGN++ A F + D++SWN++I G A HG+ ++ALE+F+ MR T KPDDI
Sbjct: 301 AMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDI 360
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
T VGVL+ACS++GLV++G YF M + + + + HYTC++DLLGR G + EA +L+ +
Sbjct: 361 TLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKD 420
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
+ E T+WGALLGA RIH N ++G A E++ ELEP N+G+Y++L+ +Y S G+
Sbjct: 421 M---PFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 477
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
DA+++ M+E GVKK PG SWI++ + H F +GD HP+ ++ L L +++
Sbjct: 478 RDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKK 536
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 215/450 (47%), Gaps = 35/450 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+RN R++EA+ LF+ + D ++WN ++ GY + G + A LF++MP RD+ ++N +++
Sbjct: 48 VRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVS 107
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G + ++ A+ +FD VRDV TW +++SGY NG+++EA RVF MP ++ VSWN +
Sbjct: 108 GYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAM 167
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A + + MD A+ F M R+VASW M+ G + G + EA+ +FD MP KD +W
Sbjct: 168 VAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWA 227
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
M+A Y GC LF +M W VN S F + TC
Sbjct: 228 AMLAAYSQGGCSEETLQLFIEMG--RCGEW-------VNR-------SAFACVLSTCADI 271
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRD 299
+ G+ + H L + Y N ++ YF+ G + A FE M RD
Sbjct: 272 ------AALECGM--QLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERD 323
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG----R 355
V WN MI G + G+E L+ F M+ + PD+ T VL CS ++ G
Sbjct: 324 VVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFY 383
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYH 414
+H A+ + T MI + R G + A +P D W +++ H
Sbjct: 384 SMHHDFGVTAKPEHYTC---MIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 440
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLS 444
E E ++ + +P++ +LS
Sbjct: 441 RNPELGRSAAE--KIFELEPENAGMYVLLS 468
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
+++A+N F++M +RD V+WN MI GY ++GF A+ +F+ M + D T V+A
Sbjct: 309 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 368
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVT-----WNSMISGYVCNGLIDEALRVFHGMPLK-DVV 115
S V+ F M VT + MI G + EA + MP + D
Sbjct: 369 CSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDST 428
Query: 116 SWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
W ++GA + +L S + E+ + + ++ N G+ +ARK+ M
Sbjct: 429 MWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMME 488
Query: 173 AKDVQ 177
+ V+
Sbjct: 489 ERGVK 493
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/606 (37%), Positives = 356/606 (58%), Gaps = 8/606 (1%)
Query: 9 AQNLFDKMPQRDTVTWNV-MIRGYFKNGFLDNAMCLFNQ--MPERDMFTYNTVIAGLMQS 65
A L +M Q ++ N I Y + G + NA +F+ +P+R + ++N +++ +S
Sbjct: 6 AATLRCRMVQARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFES 65
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
+ A +FD M R+ V++N MISGYV NG++ +A +VF MP ++VVSW ++ V
Sbjct: 66 HKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYV 125
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
++ AE F EM R+V SWT+M+ GL++E RI +A+KLFD +P KDV MI G
Sbjct: 126 QEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGG 185
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
Y G + A +LF +M R++ +W +++G + R+D A F+ MPE E +W +++
Sbjct: 186 YCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAML 245
Query: 246 SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV 305
++G +KEA E P I + +I+ + GE+ A +FE M RD WN
Sbjct: 246 MGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNA 305
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
MI L E L F +M+ G + + + SVL++C+ L +LD GRQ+HA+ ++
Sbjct: 306 MIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSE 365
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
+Q V++ +ITMY +CG++ A F+ D++ WNS+I G + HG E+AL +F
Sbjct: 366 FDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFH 425
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRF 485
M + +PD++TF+GVLSACSY+G V +G F+ MK Y ++P HY C+VDLLGR
Sbjct: 426 DMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRA 485
Query: 486 GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL 545
G +DEAM L+ ++ +E VWGALLGACR H + + E+A E++ +LEP N+G Y+
Sbjct: 486 GRVDEAMELVEKM---PMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYV 542
Query: 546 ILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS-SHPKFHRLR 604
+L+ MY + GR D + + ++ V K PGCSWI++ H+F GDS SHP+ H +
Sbjct: 543 LLSHMYATKGRWRDVEVLRKKINRR-VIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMIT 601
Query: 605 YLLNLL 610
+L L
Sbjct: 602 QMLEKL 607
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 231/451 (51%), Gaps = 21/451 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N + +A+ +FD MP+R+ V+W M+RGY + G ++ A LF +MP R++ ++ +I
Sbjct: 94 VKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIG 153
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
GL++ + AK++FD + +DVV +MI GY G +DEA +F M +++V +W +
Sbjct: 154 GLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTM 213
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ R+D+A F+ M R+ SWT M+ G + GR+ EA +LF+ MP K + A N
Sbjct: 214 VSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACN 273
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID-AAISYFKQMP-ETCE 238
MI + G + A +F+ M +RD +W +I + + +D A+ F +M E
Sbjct: 274 EMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIK-VFERKGLDLEALGLFARMQREGVA 332
Query: 239 KTWNSIISVL--------IRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAI 289
+ S+ISVL + +G ++ H+ L + + +V++ Y + G++ A
Sbjct: 333 LNFPSMISVLSVCASLASLDHG--RQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAK 390
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
+F +DV +WN MI G ++ LGEE L F M SG PD TF VL+ CS
Sbjct: 391 GIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSG 450
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNS 406
+ G +I +A+K + + M+ + R G + A+ +P+ D I W +
Sbjct: 451 KVKEGFEIF-EAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGA 509
Query: 407 IICGLAYH---GYAEKALELFERMRLTDFKP 434
++ H AE A+E ++ + P
Sbjct: 510 LLGACRNHMKLDLAEVAVEKLAKLEPKNAGP 540
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/599 (35%), Positives = 334/599 (55%), Gaps = 35/599 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R +I EA+ FD + + +WN ++ GYF NG +P+
Sbjct: 29 RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNG-----------LPKE----------- 66
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
A+++FD M R+VV+WN ++SGY+ N +I EA VF MP ++VVSW ++
Sbjct: 67 ---------ARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMV 117
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
+ + AES F M R+ SWT+M GL+ +GRI +ARKL+D MP KDV A
Sbjct: 118 KGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTN 177
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
MI G G V A +F +M +R++ +W +I G + R+D A F+ MPE E +W
Sbjct: 178 MIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSW 237
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
S++ +G +++A + E P + + +IVG+ E+GE+ A +VF+LM RD
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
W MI E L F QM++ G P + S+L++C+ L +L GRQ+HA
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHL 357
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
++ + V++ ++TMY +CG + A L F DII WNSII G A HG E+AL
Sbjct: 358 VRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEAL 417
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
++F M + P+ +T + +L+ACSYAG +++G F+ M++K+ + P HY+C VD+
Sbjct: 418 KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LGR G +D+AM L+ + I+ TVWGALLGAC+ H+ + + E+A +++ E EP+N+
Sbjct: 478 LGRAGQVDKAMELIESM---TIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNA 534
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD-SSHPK 599
G Y++L+ + S + D + M+ N V K PGCSWI++ H+F G +HP+
Sbjct: 535 GTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPE 593
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 138/461 (29%), Positives = 227/461 (49%), Gaps = 41/461 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N I EA+N+F+ MP+R+ V+W M++GY + G + A LF +MPER+ ++ +
Sbjct: 90 IKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFG 149
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
GL+ + A++++D M V+DVV +MI G G +DEA +F M ++VV+W +
Sbjct: 150 GLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTM 209
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I R+D+A F+ M + SWT M+ G GRI +A + F+ MP K V A N
Sbjct: 210 ITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN 269
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETCEK 239
MI G+ + G + A +F M DRD +W+ +I A+ F QM +
Sbjct: 270 AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRP 329
Query: 240 TWNSIISVLIRNGLV------KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVF 292
++ S+IS+L + ++ H++L + + + +V++ Y + GE+ A VF
Sbjct: 330 SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVF 389
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ +++D+ +WN +I G + LGEE LK F +M SG P+ T ++LT CS L+
Sbjct: 390 DRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLE 449
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
G +I +S +F P + S + G A
Sbjct: 450 EGLEI----------------------------FESMESKFCVTPTVEHYSCTVDMLGRA 481
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
G +KA+EL E M + KPD + +L AC +D
Sbjct: 482 --GQVDKAMELIESMTI---KPDATVWGALLGACKTHSRLD 517
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 194/443 (43%), Gaps = 40/443 (9%)
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
V+ + I L +++ A +F + + + SW +V+G G EAR+LFD+M +
Sbjct: 18 VNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER 77
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
+V +WN +++GY+ N + A ++F+ M +R++ SW ++ G + + A S F +MP
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFEL 294
E E +W + LI +G + +A + P ++ + TN+I G G V A +F+
Sbjct: 138 ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDE 197
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
M R+V W MI G +N+ + K F M P ++TS+L L G
Sbjct: 198 MRERNVVTWTTMITGYRQNNRVDVARKLFEVM----PEKTEVSWTSML-----LGYTLSG 248
Query: 355 RQIHAQA-IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
R A+ ++ + NAMI + G I A F + D +W +I
Sbjct: 249 RIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYER 308
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR----------------- 456
G+ +AL+LF +M+ +P + + +LS C+ + GR
Sbjct: 309 KGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYV 368
Query: 457 ------YYFDC---MKNKYFLQPRSAH----YTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
Y C +K K S+ + ++ GL +EA+ + +E+ + G
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT 428
Query: 504 EVSPTVWGALLGACRIHNNIKVG 526
+ A+L AC ++ G
Sbjct: 429 MPNKVTLIAILTACSYAGKLEEG 451
>gi|225437951|ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
mitochondrial-like [Vitis vinifera]
Length = 743
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/651 (35%), Positives = 361/651 (55%), Gaps = 48/651 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N I EA+ LF+ MP+R+ VT+N M+ GY + G L +A F +MPER++ ++ +++ G
Sbjct: 88 KNGFIDEARALFEIMPERNVVTYNAMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCG 147
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
L + + A+E+F+ M R+VV+WNSM+ G + +G ++EA RVF+ MP+K VSWN++I
Sbjct: 148 LANAGRIGEARELFNVMPERNVVSWNSMLVGLIRSGQLEEARRVFNEMPVKSQVSWNVMI 207
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
RM+ A F MG R+V +WT M++G R G + E LF KMP ++V +W
Sbjct: 208 AGYAEHSRMEEARVLFDGMGDRNVVTWTSMISGYCRAGNVQEGYCLFQKMPERNVVSWTA 267
Query: 182 MIAGYLDNG-------------------------------CVGVA-EDLFQKMH------ 203
MI G+ NG C G+ L + H
Sbjct: 268 MIGGFAWNGFYKEALLLFLEMKGNYDMKPNDETFISLAYACAGIGFPHLGMQFHAHLIIN 327
Query: 204 -----DRDLTSWKQLINGLVNSRRIDAA-ISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
D D +K LI+ +D A +F+ ++ NS+I+ IR G +++A
Sbjct: 328 CWDYDDYDGRLFKSLIHMYSMFGFMDFAWYIFFRNSMSYNTQSCNSMINGYIRIGQLEKA 387
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
S + P + SWT++I GYF +G++ A +F M RD W VM+ G +N+L
Sbjct: 388 QSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNNMPDRDAVAWTVMVSGHVQNELFA 447
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E F +M+ G SP N+TF+ +L + LD GRQ H +K + N++I
Sbjct: 448 EATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCLLMKTQFEFDLILQNSLI 507
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
+MYA+CG I A FS + D+ISWNS+I G ++HG +AL++FE M + P+ +
Sbjct: 508 SMYAKCGEIGDAYSIFSKMISRDLISWNSMIMGFSHHGLTSEALKVFEAMLTSGTHPNSV 567
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
TF+G+LSACS+AGL++QG FD M + + +QP+ HY C+V+LLGR G ++EA +++
Sbjct: 568 TFLGILSACSHAGLLNQGWELFDAMSDVFAIQPQLEHYVCMVNLLGRAGKVEEAEEFISK 627
Query: 498 IRADGIEVSPTVWGALLGACRIHN-NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
+ E T+WGALLG C N V A +R++EL+P N+ +++L ++ S G+
Sbjct: 628 LP---FEPDLTIWGALLGVCGFGMINTGVARRAAKRLLELDPLNAPAHVVLCNIHASIGQ 684
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
R + ++ +M GV+K PGCSWI + +VFLSGD HP+ + LL
Sbjct: 685 RAEEGQLRKEMGLKGVRKVPGCSWILLKGEPYVFLSGDRIHPQADEMLSLL 735
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 228/492 (46%), Gaps = 63/492 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ +++EA+ +F++MP + V+WNVMI GY ++ ++ A LF+ M +R++ T+ ++I+
Sbjct: 180 IRSGQLEEARRVFNEMPVKSQVSWNVMIAGYAEHSRMEEARVLFDGMGDRNVVTWTSMIS 239
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF------HGMPLKDV 114
G ++ NVQ +F M R+VV+W +MI G+ NG EAL +F + M D
Sbjct: 240 GYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALLLFLEMKGNYDMKPNDE 299
Query: 115 VSWNLVIGA----------------LVNCQRMD-----LAES-----------------Y 136
+L ++NC D L +S +
Sbjct: 300 TFISLAYACAGIGFPHLGMQFHAHLIINCWDYDDYDGRLFKSLIHMYSMFGFMDFAWYIF 359
Query: 137 FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
F+ + + S M+NG +R G++ +A+ LFD +P +D +W MI GY + G + A
Sbjct: 360 FRNSMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKAC 419
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV-- 254
LF M DRD +W +++G V + A F +M NS S+L+
Sbjct: 420 YLFNNMPDRDAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMA 479
Query: 255 -----KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
++ H L K + ++ ++I Y + GE+G A +F M +RD+ WN MI
Sbjct: 480 YLDQGRQFHCLLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRDLISWNSMIM 539
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH-AQAIKIARN 367
G + L E LK F M SG P++ TF +L+ CS L+ G ++ A + A
Sbjct: 540 GFSHHGLTSEALKVFEAMLTSGTHPNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQ 599
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSI--ICGLAY--HGYAEKALE 422
M+ + R G ++ A S +P D+ W ++ +CG G A +A +
Sbjct: 600 PQLEHYVCMVNLLGRAGKVEEAEEFISKLPFEPDLTIWGALLGVCGFGMINTGVARRAAK 659
Query: 423 LFERMRLTDFKP 434
RL + P
Sbjct: 660 -----RLLELDP 666
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 240/527 (45%), Gaps = 60/527 (11%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEALRVFHGMPL 111
++ I + ++ A+ + D M R V V W S++S + NG IDEA +F MP
Sbjct: 45 DSQILECLSQQRLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPE 104
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
++VV++N ++ V C R+ A +F+EM R+V SWT ++ GL GRI EAR+LF+ M
Sbjct: 105 RNVVTYNAMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNVM 164
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
P ++V +WN M+ G + +G + A +F +M + SW +I G R++ A F
Sbjct: 165 PERNVVSWNSMLVGLIRSGQLEEARRVFNEMPVKSQVSWNVMIAGYAEHSRMEEARVLFD 224
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
M + TW S+IS R G V+E + +K P N+ SWT
Sbjct: 225 GMGDRNVVTWTSMISGYCRAGNVQEGYCLFQKMPERNVVSWT------------------ 266
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES-GPSPDNATFTSVLTICSDLPT 350
MI G N +E L F++MK + P++ TF S+ C+ +
Sbjct: 267 -------------AMIGGFAWNGFYKEALLLFLEMKGNYDMKPNDETFISLAYACAGIGF 313
Query: 351 LDLGRQIHAQAIKIA---RNQFTTVSNAMITMYARCGNIQSA-LLEFSSVPIHDIISWNS 406
LG Q HA I + + ++I MY+ G + A + F + ++ S NS
Sbjct: 314 PHLGMQFHAHLIINCWDYDDYDGRLFKSLIHMYSMFGFMDFAWYIFFRNSMSYNTQSCNS 373
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
+I G G EKA LF+ + + D I++ +++ G + + Y F+ M ++
Sbjct: 374 MINGYIRIGQLEKAQSLFDTIPVR----DKISWTSMINGYFNVGQIAKACYLFNNMPDR- 428
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
+ +T +V + L EA L +E+R G+ + + LLGA + G
Sbjct: 429 ----DAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQG 484
Query: 527 E------IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ + +L NS L MY CG DA IF++M
Sbjct: 485 RQFHCLLMKTQFEFDLILQNS-----LISMYAKCGEIGDAYSIFSKM 526
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/599 (35%), Positives = 332/599 (55%), Gaps = 35/599 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R +I EA+ FD + + +WN ++ GYF NG +P
Sbjct: 29 RIGQINEARKFFDSLRYKAIGSWNSIVSGYFANG-----------LPRE----------- 66
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
A+++FD M R++V+WN ++SGY+ N +I+EA VF MP ++VVSW ++
Sbjct: 67 ---------ARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMV 117
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
V + AE F M R+ SWT+M GL+ GRI +ARKL+D MP KDV A
Sbjct: 118 KGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTN 177
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
MI G G V A ++F +M +R++ +W +I G ++R+D A F+ MPE E +W
Sbjct: 178 MIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSW 237
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
S++ +G +++A + E P + + +IV E+GE+ A +VF+ M RD
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNA 297
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
W MI E L+ F QM+ G P + S+L++C+ L +L GRQ+HA
Sbjct: 298 TWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHL 357
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
++ + V++ ++TMY +CG + A L F P DII WNSII G A HG E+AL
Sbjct: 358 VRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
++F M L+ P+ +T + +L+ACSY G +++G F+ M++K+ + P HY+C VD+
Sbjct: 418 KVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LGR G +D+AM L+N + I+ TVWGALLGAC+ H+ + + E+A +++ E+EP N+
Sbjct: 478 LGRAGKVDKAMELINSMT---IKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENA 534
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD-SSHPK 599
G Y++L+ + S + D + M+ V K PGCSWI++ H+F G +HP+
Sbjct: 535 GPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPE 593
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 221/439 (50%), Gaps = 14/439 (3%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N I+EA+N+F+ MP+R+ V+W M++GY + G + A LF +MPER+ ++ +
Sbjct: 90 IKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFG 149
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
GL+ + A++++D M +DVV +MI G G +DEA +F M ++V++W +
Sbjct: 150 GLIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTM 209
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I +R+D+A F+ M + SWT M+ G GRI +A + F+ MP K V A N
Sbjct: 210 ITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN 269
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEK 239
MI + G + A +F +M DRD +W+ +I A+ F QM +
Sbjct: 270 AMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRP 329
Query: 240 TWNSIISVLIRNGLV------KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVF 292
++ S+IS+L + ++ H++L + + +V++ Y + GE+ A VF
Sbjct: 330 SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVF 389
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ ++D+ +WN +I G + LGEE LK F +M SG P+ T ++LT CS L+
Sbjct: 390 DRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLE 449
Query: 353 LGRQI-HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICG 410
G +I + K + + M R G + A+ +S+ I D W +++
Sbjct: 450 EGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGA 509
Query: 411 LAYHGYAE----KALELFE 425
H + A +LFE
Sbjct: 510 CKTHSRLDLAEVAAKKLFE 528
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 365 ARNQFTTVSNAM-ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
A + T V+N+ I+ +R G I A F S+ I SWNSI+ G +G +A ++
Sbjct: 11 AYSTSTGVNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQM 70
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
F+ M + +++ G++S ++++ R F+ M + + +T +V
Sbjct: 71 FDEMPERNI----VSWNGLVSGYIKNRMIEEARNVFEIMPERNVVS-----WTAMVKGYV 121
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTV-WGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
+ G++ EA LL + EVS TV +G L+ RI + K+ ++ + + N G
Sbjct: 122 QEGMVVEA-ELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIG 180
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKENGV 572
GR ++A+ IF +M+E V
Sbjct: 181 -------GLCREGRVDEAREIFDEMRERNV 203
>gi|242063912|ref|XP_002453245.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
gi|241933076|gb|EES06221.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
Length = 603
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/602 (34%), Positives = 333/602 (55%), Gaps = 7/602 (1%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R+ A+ +FD+M +R+ TWN MI G +NG L +A +F+ MP R+ ++ ++ G
Sbjct: 5 RAGRVGAARRVFDEMSERNVFTWNCMISGLVRNGMLTDARGVFDTMPFRNSVSWAALLTG 64
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ V A+E+FD M R VV+WN+MISGY+ NG++D A +F MP ++ VSW ++I
Sbjct: 65 YARCGRVAEARELFDRMPDRSVVSWNAMISGYLWNGMVDRARDLFDVMPARNDVSWLMMI 124
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
+ +R+ A F + + +++G G + +A LF +M D+ +WN
Sbjct: 125 SGYMKRKRVREAREIFDRAPSPTTSVCNALLSGYAEHGYLKDAEDLFGRMQTPDLVSWNA 184
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
MI GY G + VA+ LF +M ++D SW ++ G + + +DAA F+ MP+ W
Sbjct: 185 MITGYTRAGMMQVAQRLFDEMPEKDTVSWTAIVRGYLQNGDVDAAWKVFQDMPDRDVLAW 244
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N+++S + + + +A P ++ SW ++ GY + G++ A F M +D
Sbjct: 245 NTMMSGFVVSERLDDALRLFADMPDRDLVSWNTILQGYVQQGDMDGATAWFRKMPEKDEA 304
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN +I G + E L +M + G PD AT++ ++ICS L L GR +H
Sbjct: 305 SWNTLISGYKD----EGALNLLSEMTQGGYRPDQATWSVAISICSSLAALGCGRMVHVCT 360
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
IK + V +++I+MY++CG I A F + D ++WN++I AYHG A +AL
Sbjct: 361 IKTGFERDALVMSSLISMYSKCGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAEAL 420
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
LF+RM F PD TF+ VLSAC++ G + +G ++F M+ + L PRS HY+C+VDL
Sbjct: 421 TLFDRMTKDGFSPDHATFLSVLSACAHKGYLYEGCHHFRSMQQDWNLIPRSDHYSCMVDL 480
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LGR G + +A N I +D + W L +C H +I++GE+ + V++ P++
Sbjct: 481 LGRSGFVHQAYNFTRRIPSD---LQINAWETLFSSCNAHGDIQLGELVAKNVLQSRPSDG 537
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFH 601
G+Y +L+ +Y + G A + MKE G+KKE GCSWI++ F S D +HP
Sbjct: 538 GMYTLLSNIYAAKGMWSSAASVRGLMKEQGLKKETGCSWIELKGDVVSFSSNDKAHPLIE 597
Query: 602 RL 603
++
Sbjct: 598 QI 599
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
+ +F G VG+A +VF+ M+ R+V WN MI GL N + + F M P ++
Sbjct: 1 MAHFRAGRVGAARRVFDEMSERNVFTWNCMISGLVRNGMLTDARGVFDTM----PFRNSV 56
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
++ A++T YARCG + A F +
Sbjct: 57 SWA-----------------------------------ALLTGYARCGRVAEARELFDRM 81
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
P ++SWN++I G ++G ++A +LF+ M +D++++ ++S V + R
Sbjct: 82 PDRSVVSWNAMISGYLWNGMVDRARDLFDVMP----ARNDVSWLMMISGYMKRKRVREAR 137
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
FD + P ++ ++ G + +A +L ++ + W A++
Sbjct: 138 EIFDRAPS-----PTTSVCNALLSGYAEHGYLKDAEDLFGRMQTPDL----VSWNAMITG 188
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ + ++A E+ ++ + + YL G + A ++F M + V
Sbjct: 189 ---YTRAGMMQVAQRLFDEMPEKDTVSWTAIVRGYLQNGDVDAAWKVFQDMPDRDV 241
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/641 (34%), Positives = 346/641 (53%), Gaps = 70/641 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFT------- 54
R+ RI +A+ LFD++P+R+TV+WN MI +G + +A LF+ MP RD F+
Sbjct: 54 RHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFSWTLMVSC 113
Query: 55 -------------------------YNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
YN +I+G + A + M D+++WNS+
Sbjct: 114 YARAGELGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMPAPDIISWNSV 173
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
+ G NG + A++ F MP +D+VSWNL++ V +D A F + + +V SW
Sbjct: 174 LVGLTRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWV 233
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
++NG R GRI EAR+LFD++P ++V AWN+M++GYL + A LF +M D++ S
Sbjct: 234 TLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDKNSIS 293
Query: 210 WKQLINGLVNSRRIDAAISYFKQMP--ETCEKT--------------------------- 240
W +I+ LV ++ A +MP KT
Sbjct: 294 WTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARLIFDGLEVRDA 353
Query: 241 --WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
WN++IS + G++ EA ++ P ++ SW +I GY G++ A+ +F M R
Sbjct: 354 VCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQR 413
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
+ WN +I G +N L E L+ FV M+ D +T+ L+ C+DL L +GRQ H
Sbjct: 414 NTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAALHVGRQFH 473
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
+ + + NA+I+ YA+CG I A F +P DI+SWN++I G A +G+
Sbjct: 474 SLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHGT 533
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
+A+ +F M D +PD++TFVGVLSACS+AGL+D+G +F+ M Y L+P + HY C+
Sbjct: 534 EAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALRPVAEHYACM 593
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGERVMEL 536
VDLLGR G + EA ++ G++V P VWGA+LGACR+H N ++ ++A E++ EL
Sbjct: 594 VDLLGRSGRLSEAFEIIQ-----GMQVQPNAGVWGAMLGACRVHKNHELAQLAAEKLYEL 648
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
EP+ + Y++L+ + G+ ++A+ + +KE GV K PG
Sbjct: 649 EPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHKTPG 689
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 150/552 (27%), Positives = 250/552 (45%), Gaps = 78/552 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
RN + A FD+MP RD V+WN+M+ GY + G +D+A LF +P ++ ++ T++ G
Sbjct: 179 RNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNG 238
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
++ + A+E+FD + R+V WN M+SGY+ ++EA ++F MP K+ +SW +I
Sbjct: 239 YCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDKNSISWTTMI 298
Query: 122 GALV-------------------------------NCQRMDLAESYFKEMGARDVASWTI 150
ALV + +D A F + RD W
Sbjct: 299 SALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARLIFDGLEVRDAVCWNT 358
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
M++G V G + EA LF +MP KD+ +WN MIAGY +G + A +F+KM+ R+ SW
Sbjct: 359 MISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQRNTVSW 418
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKT-WN------SIISVLIRNGLVKEAHSYLEK 263
+I+G V + A+ +F M ++ W+ S + L + ++ HS L +
Sbjct: 419 NSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAALHVGRQFHSLLAR 478
Query: 264 YPYSNIASWTNVIV-GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
Y + N ++ Y + G + A +VF+ M D+ WN +I G N G E +
Sbjct: 479 SGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAISV 538
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F +M+++ PD TF VL+ CS +D G N+M YA
Sbjct: 539 FREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFF---------------NSMTKDYA- 582
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
V H C + G + + E FE ++ +P+ + +
Sbjct: 583 ----------LRPVAEH-------YACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAM 625
Query: 443 LSACSYAGLVDQGRYYFDCMKNK-YFLQP-RSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
L AC V + K Y L+P ++++Y + ++ G DEA N+ I+
Sbjct: 626 LGACR----VHKNHELAQLAAEKLYELEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKE 681
Query: 501 DGIEVSPTVWGA 512
G+ +P + G+
Sbjct: 682 RGVHKTPGLAGS 693
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/554 (26%), Positives = 253/554 (45%), Gaps = 44/554 (7%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
++ N + L +S + A+ +FD M R+ V++N+M+S +G I +A R+F +P
Sbjct: 11 VYRSNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPR 70
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
++ VSWN +I A + R+ A F M ARD SWT+MV+ R G + AR D+M
Sbjct: 71 RNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFSWTLMVSCYARAGELGLARDALDRM 130
Query: 172 PAKDVQA-WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
P A +N MI+GY +G A L ++M D+ SW ++ GL + + A+ +F
Sbjct: 131 PGDKCTACYNAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFF 190
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+MP +WN ++ +R G V A P N+ SW ++ GY G +G A +
Sbjct: 191 DEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAGRIGEARE 250
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT------- 343
+F+ + R+V WNVM+ G EE K F +M P ++ ++T++++
Sbjct: 251 LFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEM----PDKNSISWTTMISALVRGGK 306
Query: 344 ------ICSDLP-------TLDLGRQIHAQAIKIARNQFTTVS-------NAMITMYARC 383
+ +P T + + ++ I AR F + N MI+ Y C
Sbjct: 307 LQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARLIFDGLEVRDAVCWNTMISGYVHC 366
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G + A++ F +P D++SWN++I G A+ G KA+ +F +M + + +++ V+
Sbjct: 367 GMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMN----QRNTVSWNSVI 422
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
S GL + +F M+ S Y C + + + + G
Sbjct: 423 SGFVQNGLCVEALQHFVLMRRDAKRADWST-YACCLSACADLAALHVGRQFHSLLARSGY 481
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVM--ELEPNNSGVYLILTEMYLSCGRREDAK 561
+ + G I K G I R + E+ + + L + Y S G +A
Sbjct: 482 -----IGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAI 536
Query: 562 RIFAQMKENGVKKE 575
+F +M++N V+ +
Sbjct: 537 SVFREMEDNDVRPD 550
>gi|413935435|gb|AFW69986.1| hypothetical protein ZEAMMB73_442164 [Zea mays]
Length = 658
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/629 (33%), Positives = 330/629 (52%), Gaps = 70/629 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R+ A+ +FD+M +R+ TWN M+ G +NG L +A +F+ MP R+ ++ ++ G
Sbjct: 48 RAGRVGAARRVFDEMRERNVFTWNCMVSGLARNGLLADARGVFDAMPSRNSVSWAALLTG 107
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ V A+++FD M R+VV+WN+M+SGY+ NG++D A +F MP +D VSW +++
Sbjct: 108 YARRGRVAEARDLFDRMPHRNVVSWNAMVSGYLRNGMVDRARELFDAMPARDDVSWLMMV 167
Query: 122 GALVNCQR--------------------------------MDLAESYFKEMGARDVASWT 149
+ +R + AE F M D SW
Sbjct: 168 SGYMRRKRFREAREIFDRAPSPPPTSVCNALLSGYAGYGYLKDAEELFGRMQRPDRVSWN 227
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
M+ G R G + AR+LFD+MP KD +W ++ GYL NG V A ++FQ M DRD+ +
Sbjct: 228 AMITGYTRAGMMQVARRLFDEMPGKDTVSWTAIVRGYLQNGDVDAAWEVFQDMPDRDVLA 287
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
W ++ G V S R+D A+ F MP+ ++
Sbjct: 288 WNTMMGGFVVSDRLDDALRLFADMPD-------------------------------RDL 316
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
SW ++ GY + G++ SA F M +D T WN +I G + E L +M
Sbjct: 317 VSWNTILQGYIQQGDMDSATTWFRSMLEKDETSWNTVISGYKD----EGALSLLSEMTRG 372
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G PD AT++ V+++C+ L L GR +H IK V +++I+MY++CG I A
Sbjct: 373 GYRPDQATWSVVISVCASLAALGCGRMVHICTIKTGFEHDALVMSSLISMYSKCGLITEA 432
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F + D ++WN++I AYHG A +AL LF+RM F PD TF+ VLSAC++
Sbjct: 433 SQVFDLIVQRDTVTWNAMIATYAYHGLAAEALALFDRMTKDRFSPDHATFLSVLSACAHK 492
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
G + +G +YF M+ + L PRS HY+C+VDLLGR G + +A N +I ++ +
Sbjct: 493 GYLYEGCHYFRSMQQDWNLVPRSDHYSCMVDLLGRSGFVHQAYNFTRKIPSN---LQINA 549
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
W L +C H +I++GE+ + V++ P++ G+Y +L+ +Y + G A + MKE
Sbjct: 550 WETLFSSCNAHGDIQLGELVAKNVLQSRPSDGGMYTLLSNIYAAKGMWSSAATVRGLMKE 609
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
G+KKE GCSWI++ F S D++HP
Sbjct: 610 QGLKKETGCSWIELKGDVVSFSSNDNAHP 638
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/429 (30%), Positives = 213/429 (49%), Gaps = 21/429 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTY-NTVI 59
+RN + A+ LFD MP RD V+W +M+ GY + A +F++ P + N ++
Sbjct: 140 LRNGMVDRARELFDAMPARDDVSWLMMVSGYMRRKRFREAREIFDRAPSPPPTSVCNALL 199
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+G ++ A+E+F M+ D V+WN+MI+GY G++ A R+F MP KD VSW
Sbjct: 200 SGYAGYGYLKDAEELFGRMQRPDRVSWNAMITGYTRAGMMQVARRLFDEMPGKDTVSWTA 259
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++ + +D A F++M RDV +W M+ G V R+ +A +LF MP +D+ +W
Sbjct: 260 IVRGYLQNGDVDAAWEVFQDMPDRDVLAWNTMMGGFVVSDRLDDALRLFADMPDRDLVSW 319
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-- 237
N ++ GY+ G + A F+ M ++D TSW +I+G + + A+S +M
Sbjct: 320 NTILQGYIQQGDMDSATTWFRSMLEKDETSWNTVISGYKD----EGALSLLSEMTRGGYR 375
Query: 238 --EKTWNSIISV---LIRNGLVKEAHSYLEKYPYSNIA-SWTNVIVGYFEMGEVGSAIKV 291
+ TW+ +ISV L G + H K + + A +++I Y + G + A +V
Sbjct: 376 PDQATWSVVISVCASLAALGCGRMVHICTIKTGFEHDALVMSSLISMYSKCGLITEASQV 435
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F+L+ RD WN MI + L E L F +M + SPD+ATF SVL+ C+ L
Sbjct: 436 FDLIVQRDTVTWNAMIATYAYHGLAAEALALFDRMTKDRFSPDHATFLSVLSACAHKGYL 495
Query: 352 DLG----RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNS 406
G R + + R+ + M+ + R G + A +P + I +W +
Sbjct: 496 YEGCHYFRSMQQDWNLVPRSDHYSC---MVDLLGRSGFVHQAYNFTRKIPSNLQINAWET 552
Query: 407 IICGLAYHG 415
+ HG
Sbjct: 553 LFSSCNAHG 561
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 187/426 (43%), Gaps = 25/426 (5%)
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
A DV W + R GR+ AR++FD+M ++V WN M++G NG + A +F
Sbjct: 33 AGDVGRWNSDIMAHFRAGRVGAARRVFDEMRERNVFTWNCMVSGLARNGLLADARGVFDA 92
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M R+ SW L+ G R+ A F +MP +WN+++S +RNG+V A
Sbjct: 93 MPSRNSVSWAALLTGYARRGRVAEARDLFDRMPHRNVVSWNAMVSGYLRNGMVDRARELF 152
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT-VWNVMIFGLGENDLGEEGL 320
+ P + SW ++ GY A ++F+ + T V N ++ G ++
Sbjct: 153 DAMPARDDVSWLMMVSGYMRRKRFREAREIFDRAPSPPPTSVCNALLSGYAGYGYLKDAE 212
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
+ F +M+ PD ++ +++T + + + R++ + + T A++ Y
Sbjct: 213 ELFGRMQR----PDRVSWNAMITGYTRAGMMQVARRLFDEMP----GKDTVSWTAIVRGY 264
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+ G++ +A F +P D+++WN+++ G + AL LF M D +++
Sbjct: 265 LQNGDVDAAWEVFQDMPDRDVLAWNTMMGGFVVSDRLDDALRLFADMPDRDL----VSWN 320
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE-AMNLLNEIR 499
+L G +D +F M L+ + V+ G DE A++LL+E+
Sbjct: 321 TILQGYIQQGDMDSATTWFRSM-----LEKDETSWNTVIS-----GYKDEGALSLLSEMT 370
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGRRE 558
G W ++ C + G + ++ +++ V L MY CG
Sbjct: 371 RGGYRPDQATWSVVISVCASLAALGCGRMVHICTIKTGFEHDALVMSSLISMYSKCGLIT 430
Query: 559 DAKRIF 564
+A ++F
Sbjct: 431 EASQVF 436
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 149/309 (48%), Gaps = 29/309 (9%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N + A +F MP RD + WN M+ G+ + LD+A+ LF MP+RD+ ++NT++
Sbjct: 265 LQNGDVDAAWEVFQDMPDRDVLAWNTMMGGFVVSDRLDDALRLFADMPDRDLVSWNTILQ 324
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +Q ++ A F M +D +WN++ISGY G + + G D +W++V
Sbjct: 325 GYIQQGDMDSATTWFRSMLEKDETSWNTVISGYKDEGALSLLSEMTRGGYRPDQATWSVV 384
Query: 121 IG-----ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
I A + C RM + K D + +++ + G I EA ++FD + +D
Sbjct: 385 ISVCASLAALGCGRM-VHICTIKTGFEHDALVMSSLISMYSKCGLITEASQVFDLIVQRD 443
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKM-HDR---DLTSWKQLINGLVNSRRIDAAISYFK 231
WN MIA Y +G A LF +M DR D ++ +++ + + YF+
Sbjct: 444 TVTWNAMIATYAYHGLAAEALALFDRMTKDRFSPDHATFLSVLSACAHKGYLYEGCHYFR 503
Query: 232 QMPETCEKTWN---------SIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIV---- 277
M ++ WN ++ +L R+G V +A+++ K P + I +W +
Sbjct: 504 SM----QQDWNLVPRSDHYSCMVDLLGRSGFVHQAYNFTRKIPSNLQINAWETLFSSCNA 559
Query: 278 -GYFEMGEV 285
G ++GE+
Sbjct: 560 HGDIQLGEL 568
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/642 (33%), Positives = 352/642 (54%), Gaps = 69/642 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R+ RI EA+ LFD MP R+TV+WN MI +G + +A LF++MP RD F++ +++
Sbjct: 61 RHGRIDEARALFDGMPGRNTVSWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSC 120
Query: 62 LMQSDNVQGAKEVFDGMEV-RDVVTWNSMISGYVCNGLIDEALRVFHGMP---------- 110
+ +++ A++V D M + +N+MISGY NG D+A+++ MP
Sbjct: 121 YARGGDLELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSA 180
Query: 111 --------------------LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTI 150
+KD+ SWNL++ V ++ A S+F ++ + +V SW
Sbjct: 181 LAGLTQSGEMVRAVQFFDEMVKDMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVT 240
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
++NG R GRI +AR LFD+MP ++V AWN+M+ GY+ + A LF +M ++ SW
Sbjct: 241 LLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSISW 300
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETC--EKT---------------------------- 240
+I+GL + ++ A +M C KT
Sbjct: 301 TTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARRIFDGMEVHDTV 360
Query: 241 -WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
WN++IS ++ G+++EA ++ P ++ SW +I GY + G++ AI +F M R+
Sbjct: 361 CWNTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMNRRN 420
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
WN +I G +ND + L F+ M+ D +T+ S L C++L L +GRQ+H
Sbjct: 421 TVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVLHVGRQLHN 480
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
++ + NA+I+ YA+CG I A F + DI+SWN++I G A +G +
Sbjct: 481 LLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDGYASNGQGTE 540
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A+ +F M +PD++TFVG+LSACS+AGL+D+G ++F M +Y L+P + HY C+V
Sbjct: 541 AIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYACMV 600
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGERVMELE 537
DLLGR G ++EA L+ G+++ P VWGALLGAC +H N ++ ++A ER+ ELE
Sbjct: 601 DLLGRAGKLNEAFELVQ-----GMQIQPNAGVWGALLGACHMHKNHELAQLAAERLSELE 655
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
P + Y++L+ + G+ +++++ A +KE GV K PG +
Sbjct: 656 PRKASNYVLLSNISAEAGKWDESEKARASIKEKGVNKPPGLA 697
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 166/563 (29%), Positives = 258/563 (45%), Gaps = 79/563 (14%)
Query: 53 FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
F N + L +S + A+ +FD M +R+ VT+N+M+S +G IDEA +F GMP +
Sbjct: 19 FRSNKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGR 78
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
+ VSWN +I AL + R+ A S F M RD SWT+MV+ R G + AR + D+MP
Sbjct: 79 NTVSWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMP 138
Query: 173 AKDVQA-WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
A +N MI+GY NG A L ++M DL SW + GL S + A+ +F
Sbjct: 139 GDKCTACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFD 198
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
+M + +WN +++ +R G + A S+ K N+ SW ++ GY G + A +
Sbjct: 199 EMVKDM-TSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADARDL 257
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F+ M R+V WNVM+ G EE K F +M P ++ ++T++++ + L
Sbjct: 258 FDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEM----PIKNSISWTTIISGLARAGKL 313
Query: 352 DLGRQI------HAQAIKIA-------RNQF--------------TTVSNAMITMYARCG 384
+ + + A K A RN T N MI+ Y +CG
Sbjct: 314 QEAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARRIFDGMEVHDTVCWNTMISGYVQCG 373
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
++ A+L F +P D++SWN++I G A G KA+ +F RM + + +++ V+S
Sbjct: 374 ILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMN----RRNTVSWNSVIS 429
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
G V R+ VD L F L+ N RAD
Sbjct: 430 -----GFVQNDRF---------------------VDALHHFMLMRRGTN-----RADW-- 456
Query: 505 VSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI 563
+ + + L AC + VG ++ V N+S L Y CGR +AK+I
Sbjct: 457 ---STYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQI 513
Query: 564 FAQMKENGVKKEPGCSWIQINDG 586
F +M + SW + DG
Sbjct: 514 FDEMVYKDI-----VSWNALIDG 531
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/539 (38%), Positives = 318/539 (58%), Gaps = 12/539 (2%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
+V N MI+ +G I EA R+F M DV++W VI + C ++ A F +
Sbjct: 66 NVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVD 125
Query: 142 AR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
A+ +V +WT MV G +R +I +A KLF++MP K+V +WN MI GY NG + A LF+
Sbjct: 126 AKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFE 185
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
KM +R++ SW +++ L RI+ A F +MPE +W ++I+ GL+ EA
Sbjct: 186 KMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIA-----GLLDEALDL 240
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
E+ P ++ SW +I G + G++ A K+F M ++V W MI G + EE L
Sbjct: 241 FERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEAL 300
Query: 321 KFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
K F +M +G P+ TF SVL CS+L L G+Q+H K T V +A+I M
Sbjct: 301 KIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINM 360
Query: 380 YARCGNIQSALLEFSS--VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
Y++CG + +A F D++SWN II A+HGY ++A+ F+ MR + FKPDD+
Sbjct: 361 YSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDV 420
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
T+VG+LSACS+AGLV++G YFD + + R HY C+VDL GR G + EA +
Sbjct: 421 TYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIER 480
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
+ + S VWGALL C +H N+K+G+ A ++++E+EP N+G YL+L+ +Y S G+
Sbjct: 481 LET---KPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKW 537
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+A R+ +MK+ G+KK+PGCSWI++ + HVF+ GD SH + + LL LH+++++
Sbjct: 538 REAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKK 596
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 235/434 (54%), Gaps = 31/434 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-PERDMFTYNTVIA 60
++ RI EA+ LFD+M + D +TW +I GY K G ++ A LF+++ ++++ T+ ++
Sbjct: 79 KDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVG 138
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++S+ + A+++F+ M ++VV+WN+MI GY NG ID A+ +F MP ++VVSWN V
Sbjct: 139 GYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTV 198
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ L C R++ A F M RDV SWT M+ GL+ EA LF++MP +D+ +WN
Sbjct: 199 MSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLD-----EALDLFERMPERDLPSWN 253
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET--CE 238
MI G + NG + A LF +M +++ SW +I G V + A+ F +M T +
Sbjct: 254 TMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAK 313
Query: 239 KTWNSIISVL--IRN----GLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKV 291
+ +SVL N G ++ H + K Y + + ++ Y + GE+G+A K+
Sbjct: 314 PNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKM 373
Query: 292 FE--LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
F+ + + RD+ WN +I + G+E + FF +M++SG PD+ T+ +L+ CS
Sbjct: 374 FDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAG 433
Query: 350 TLDLGRQ-----IHAQAIKIARNQFTTVSNAMITMYARCGNIQSA---LLEFSSVPIHDI 401
++ G + + ++I + + + ++ + R G ++ A + + P +
Sbjct: 434 LVEEGLKYFDELVKDRSILVREDHYA----CLVDLCGRAGRLKEAFGFIERLETKPSARV 489
Query: 402 ISWNSIICGLAYHG 415
W +++ G H
Sbjct: 490 --WGALLAGCNVHA 501
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 159/309 (51%), Gaps = 51/309 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ +I +A+ LF++MP ++ V+WN MI GY +NG +D+AM LF +MPER++ ++NTV++
Sbjct: 141 IRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMS 200
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
L Q ++ A+ +FD M RDV++W +MI+ GL+DEAL +F MP +D+ SWN +
Sbjct: 201 MLAQCGRIEEARRLFDRMPERDVISWTAMIA-----GLLDEALDLFERMPERDLPSWNTM 255
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM----PAKDV 176
I L+ + A F EM ++V SWT M+ G V+EG EA K+F +M AK
Sbjct: 256 ITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPN 315
Query: 177 QAWNLMIAGYLDN------------------------------------GCVGVAEDLFQ 200
Q + + G N G +G A +F
Sbjct: 316 QGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFD 375
Query: 201 K--MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV 254
RDL SW +I + AI++FK+M ++ K T+ ++S GLV
Sbjct: 376 DGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLV 435
Query: 255 KEAHSYLEK 263
+E Y ++
Sbjct: 436 EEGLKYFDE 444
>gi|297826975|ref|XP_002881370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327209|gb|EFH57629.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/587 (35%), Positives = 338/587 (57%), Gaps = 36/587 (6%)
Query: 33 KNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR-DVVTWNSMIS 91
K G L A LF+ +PERD+ T+ VI G ++ N++ A+E+FD ++ R +VVTW +M+S
Sbjct: 58 KVGKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDSRKNVVTWTAMVS 117
Query: 92 GYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIM 151
GY+ + + A +F MP +++VSWN +I R+D A F EM R+ SW M
Sbjct: 118 GYLRSKQLSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDEMPERNTVSWNTM 177
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
+ LV+ GRI EA LF++MP KDV +W M+ G NG V A LF M +R++ SW
Sbjct: 178 IKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLFDCMPERNIISWN 237
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
+I G + RID A F+ MPE +WN++I+ IRN + A ++ P N+ S
Sbjct: 238 AMITGYTYNNRIDEADQLFQVMPERDFASWNTMITGFIRNREINRACGLFDRMPQKNVIS 297
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
WT +I GY E E A+KVF M +++
Sbjct: 298 WTAMITGYVENKENEEALKVFSKM------------------------------LRDGCV 327
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
P+ T+ S+L+ CSDL L G+QIH K + V++A+I MY++ G + +A
Sbjct: 328 KPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQENEVVTSALINMYSKSGELIAARK 387
Query: 392 EFSS--VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F + V D+ISWNS+I A+HG+ ++A+E++++MR FKP ++T++ +L ACS+A
Sbjct: 388 MFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYDQMRKHGFKPSEVTYLNLLFACSHA 447
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
GLV++G +F + L R HYTC+VDL GR G + + +N +N D +S +
Sbjct: 448 GLVEKGMEFFKELVRDESLPLREEHYTCLVDLCGRAGRLKDVLNFIN---CDDARLSRSF 504
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
+GA+L AC +H+ + + + ++V+E +++G Y++++ +Y + G+RE A + +MKE
Sbjct: 505 YGAILSACNVHSEVSIAKEVVKKVLETGSDDAGTYVMMSNIYAASGKREKAAEMRMKMKE 564
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
G+KK+PGCSW++I + H+F+ GD SHP+F L +++ L ++ +
Sbjct: 565 KGLKKQPGCSWVKIGNQTHLFVVGDKSHPQFEALDSIVSDLRNKMRK 611
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 231/435 (53%), Gaps = 52/435 (11%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-DMFTYNTVIAGL 62
++ EA+ LFD +P+RD VTW +I GY K G + A LF+++ R ++ T+ +++G
Sbjct: 60 GKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDSRKNVVTWTAMVSGY 119
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
++S + A+ +F M R++V+WN+MI GY +G ID+AL +F MP ++ VSWN +I
Sbjct: 120 LRSKQLSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDEMPERNTVSWNTMIK 179
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
ALV R+D A + F+ M +DV SWT MV+GL + G++ EAR+LFD MP +++ +WN M
Sbjct: 180 ALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAM 239
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN 242
I GY N + A+ LFQ M +RD SW +I G + +R I+ A F +MP+ +W
Sbjct: 240 ITGYTYNNRIDEADQLFQVMPERDFASWNTMITGFIRNREINRACGLFDRMPQKNVISWT 299
Query: 243 SII----------------SVLIRNGLVK-----------------------EAHSYLEK 263
++I S ++R+G VK + H + K
Sbjct: 300 AMITGYVENKENEEALKVFSKMLRDGCVKPNVGTYVSILSACSDLAGLVEGQQIHQLISK 359
Query: 264 YPYSNIASWTNVIVG-YFEMGEVGSAIKVFE--LMTTRDVTVWNVMIFGLGENDLGEEGL 320
+ T+ ++ Y + GE+ +A K+F+ L+ RD+ WN MI + G+E +
Sbjct: 360 SVHQENEVVTSALINMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAI 419
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ-----IHAQAIKIARNQFTTVSNA 375
+ + QM++ G P T+ ++L CS ++ G + + +++ + +T
Sbjct: 420 EMYDQMRKHGFKPSEVTYLNLLFACSHAGLVEKGMEFFKELVRDESLPLREEHYT----C 475
Query: 376 MITMYARCGNIQSAL 390
++ + R G ++ L
Sbjct: 476 LVDLCGRAGRLKDVL 490
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 166/360 (46%), Gaps = 73/360 (20%)
Query: 128 QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD------------ 175
Q +L S + V ++ L + G++ EARKLFD +P +D
Sbjct: 29 QLRNLVRSIYSSSSKPRVPRPEWLIGKLCKVGKLAEARKLFDGLPERDVVTWTDVITGYI 88
Query: 176 --------------------VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
V W M++GYL + + VAE LFQ+M +R++ SW +I+
Sbjct: 89 KLGNMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSVAETLFQEMPERNIVSWNTMID 148
Query: 216 GLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNV 275
G S RID A+ F +MPE +WN++I L++ G + EA + E+ P ++ SWT +
Sbjct: 149 GYAQSGRIDKALELFDEMPERNTVSWNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAM 208
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ G + G+V A ++F+ M R++ WN MI G N+ +E + F M P D
Sbjct: 209 VDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYTYNNRIDEADQLFQVM----PERDF 264
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
A++ N MIT + R I A F
Sbjct: 265 ASW-----------------------------------NTMITGFIRNREINRACGLFDR 289
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSACS-YAGLVD 453
+P ++ISW ++I G + E+AL++F +M R KP+ T+V +LSACS AGLV+
Sbjct: 290 MPQKNVISWTAMITGYVENKENEEALKVFSKMLRDGCVKPNVGTYVSILSACSDLAGLVE 349
>gi|255560453|ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539509|gb|EEF41097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 662
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/603 (37%), Positives = 357/603 (59%), Gaps = 27/603 (4%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R RI EA+ LFDK+ +R+TVTWN MI GY K G + A LF++MPERD+ ++N +I+G
Sbjct: 59 RTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDEMPERDVVSWNLIISG 118
Query: 62 LMQSDN---VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
+ ++ + +FD M R V+WN+MISGY NG +DEAL +F+ MP K+ VSWN
Sbjct: 119 YVSCRGKRFIEEGRNLFDKMPERCCVSWNTMISGYAKNGRMDEALGLFNTMPEKNSVSWN 178
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF----DKMPAK 174
++ + + A +FK M RDV S + +V+GL++ + +A ++ + +K
Sbjct: 179 AMVSGFLQNGDVVRAIEFFKRMPERDVTSLSALVSGLIQNSELDQAERILLDYGNNGGSK 238
Query: 175 D--VQAWNLMIAGYLDNGCVGVAEDLFQKM-------------HDRDLTSWKQLINGLVN 219
+ V A+N +IAGY G V A++LF K+ +R++ SW +I V
Sbjct: 239 EYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVK 298
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
+ + +A F QMP+ +WN++IS + ++EA + K P + SW +I GY
Sbjct: 299 AGDVISARKLFDQMPDRDSFSWNTMISGYVHVLDMEEASNLFHKMPSPDTLSWNLMISGY 358
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G + A FE M +++ WN +I G +N + F+QM+ G D T +
Sbjct: 359 AQSGSLELAHDFFERMPQKNLVSWNSVIAGYEKNGDYIGAINLFIQMQVEGEKSDRHTLS 418
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
S+L++ S + L LG QIH Q + ++NA+ITMY+RCG I A F + +
Sbjct: 419 SLLSVSSGIVDLQLGMQIH-QLVSKTVIPDVPLNNALITMYSRCGAIFEARTIFYEMKLQ 477
Query: 400 -DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
++ISWN++I G A HGYA +ALELF+ MR +P ITF+ VL+AC++AGLV++GR
Sbjct: 478 KEVISWNAMIGGYASHGYATEALELFKLMRSFKVQPTYITFISVLNACAHAGLVEEGRRI 537
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F+ M + Y ++PR H+ +VD++GR G ++EA++L+N + IE VWGALLGA R
Sbjct: 538 FESMVSDYGVEPRVEHFASLVDIVGRQGQLEEALDLINSMT---IEPDKAVWGALLGASR 594
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
+HNN+++ +A E +M+LEP++S Y++L MY+ G+ ++A I + M+ N +KKE
Sbjct: 595 VHNNVEMARVAAEALMKLEPDSSVPYILLYNMYVDVGQWDNAAEIRSMMERNNIKKEAAI 654
Query: 579 SWI 581
SW+
Sbjct: 655 SWV 657
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 157/549 (28%), Positives = 261/549 (47%), Gaps = 81/549 (14%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+ ++++ N I+ ++ + A+ +FD +E R+ VTWNSMISGYV G + +A ++F
Sbjct: 44 DSNLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDE 103
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAE---SYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
MP +DVVSWNL+I V+C+ E + F +M R SW M++G + GR+ EA
Sbjct: 104 MPERDVVSWNLIISGYVSCRGKRFIEEGRNLFDKMPERCCVSWNTMISGYAKNGRMDEAL 163
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
LF+ MP K+ +WN M++G+L NG V A + F++M +RD+TS L++GL+ + +D
Sbjct: 164 GLFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDVTSLSALVSGLIQNSELDQ 223
Query: 226 A----ISYFKQ--MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY------------- 266
A + Y E +N++I+ + G V EA + +K P+
Sbjct: 224 AERILLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGRTGRFE 283
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
N+ SW +I+ Y + G+V SA K+F+ M RD WN MI G EE F +M
Sbjct: 284 RNVVSWNTMIMCYVKAGDVISARKLFDQMPDRDSFSWNTMISGYVHVLDMEEASNLFHKM 343
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
PSPD ++ N MI+ YA+ G++
Sbjct: 344 ----PSPDTLSW-----------------------------------NLMISGYAQSGSL 364
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
+ A F +P +++SWNS+I G +G A+ LF +M++ K D T
Sbjct: 365 ELAHDFFERMPQKNLVSWNSVIAGYEKNGDYIGAINLFIQMQVEGEKSDRHTL--SSLLS 422
Query: 447 SYAGLVD-QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
+G+VD Q + +K + P ++ + R G I EA + E++ +
Sbjct: 423 VSSGIVDLQLGMQIHQLVSKTVI-PDVPLNNALITMYSRCGAIFEARTIFYEMKLQKEVI 481
Query: 506 SPTVWGALLGACRIH----NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC---GRRE 558
S W A++G H +++ ++ R +++P Y+ + +C G E
Sbjct: 482 S---WNAMIGGYASHGYATEALELFKLM--RSFKVQP----TYITFISVLNACAHAGLVE 532
Query: 559 DAKRIFAQM 567
+ +RIF M
Sbjct: 533 EGRRIFESM 541
>gi|224103137|ref|XP_002312939.1| predicted protein [Populus trichocarpa]
gi|222849347|gb|EEE86894.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/603 (36%), Positives = 349/603 (57%), Gaps = 27/603 (4%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N RI EA+ LFD+M + +TV+WN +IR Y K + A LF++MP+RD+ ++N +I+G
Sbjct: 9 KNGRIDEARALFDQMEETNTVSWNAIIRAYVKRREIAKARKLFDEMPQRDIVSWNLMISG 68
Query: 62 LMQSDNVQGAKE---VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
+ ++ KE +FD M RD+V+WN+MISGY NG +DEALR+F MP DVVSWN
Sbjct: 69 YVSCHGIRFLKEGRNLFDRMPERDIVSWNTMISGYAKNGRMDEALRMFKLMPEGDVVSWN 128
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL---FDKMPAKD 175
++ + + A YF+ M RD AS + +V+GL+R G + EA ++ F++ +
Sbjct: 129 AIVTGFLQNGDVARAIEYFERMPERDAASLSALVSGLIRNGELDEAARVVVRFERDGGRK 188
Query: 176 ---VQAWNLMIAGYLDNGCVGVAEDLFQKM-------------HDRDLTSWKQLINGLVN 219
+QA+N +IAGY V A LF ++ R++ SW +I V
Sbjct: 189 ENLLQAYNTLIAGYGRRDRVDEARKLFDQIPFCDGKGKGGDGRFGRNVVSWNTMIMCYVK 248
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
+ I A F QM E +WN++IS + + EA + P +I SW +I G+
Sbjct: 249 AGNIVFARELFDQMMERDTISWNTMISGYVNMLDMDEASRLFCEMPNPDIFSWNKMIAGH 308
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
++G++ +F M +++ WN +I G +ND +K F+QM+ G PD T +
Sbjct: 309 AQIGDLDRVNDLFGRMPQKNLVSWNSVITGYEKNDDYIGAIKIFIQMQVEGEKPDRHTLS 368
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
SVL++ + + L LG QIH K ++NA+ITMY+RCG I A F V +
Sbjct: 369 SVLSVSAGIVDLQLGMQIHQLVTKTVIPD-VPINNALITMYSRCGAIIEAGTIFDEVKLQ 427
Query: 400 -DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
++ISWN++I G A HGYA +ALE+F+ M+ D +P ITF+ VL AC++AGLV++GR
Sbjct: 428 KEVISWNAMIGGYASHGYAVEALEVFKLMKSFDVRPTHITFISVLHACAHAGLVEEGREI 487
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F+ M +++ ++P HY +VD++ R G +++A++L+N + E VWGALL A +
Sbjct: 488 FESMADEFGIEPSVEHYASLVDIMSRHGQLEQALDLINSM---PFEPDKAVWGALLSAAK 544
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
+HN I+V +A E ++ LEP++S Y++L MY G+ + A + M+ + +KK+
Sbjct: 545 VHNKIEVARVAAEALIRLEPDSSAPYVLLYNMYADVGQWDSAAEVRIMMERSNIKKQAAY 604
Query: 579 SWI 581
SW+
Sbjct: 605 SWV 607
>gi|15226879|ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099187|sp|O64766.1|PP185_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g35030, mitochondrial; Flags: Precursor
gi|3033399|gb|AAC12843.1| hypothetical protein [Arabidopsis thaliana]
gi|209414526|gb|ACI46503.1| At2g35030 [Arabidopsis thaliana]
gi|330253957|gb|AEC09051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/608 (33%), Positives = 353/608 (58%), Gaps = 24/608 (3%)
Query: 28 IRGYFKNGFL------DNAMCLFNQMPERDMFTYNT---------VIAGLMQSDNVQGAK 72
+R Y+K + D ++ LFN + R +++ ++ +I L + + A+
Sbjct: 9 LRSYYKRSSVFPSSDNDRSVQLFNLV--RSIYSSSSRPRVPQPEWLIGELCKVGKIAEAR 66
Query: 73 EVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-PLKDVVSWNLVIGALVNCQRMD 131
++FDG+ RDVVTW +I+GY+ G + EA +F + K+VV+W ++ + +++
Sbjct: 67 KLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLS 126
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
+AE F+EM R+V SW M++G + GRI +A +LFD+MP +++ +WN M+ + G
Sbjct: 127 IAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGR 186
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN 251
+ A +LF++M RD+ SW +++GL + ++D A F MPE +WN++I+ +N
Sbjct: 187 IDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQN 246
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
+ EA + P + ASW +I G+ E+ A +F+ M ++V W MI G
Sbjct: 247 NRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYV 306
Query: 312 ENDLGEEGLKFFVQMKESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
EN EE L F +M G P+ T+ S+L+ CSDL L G+QIH K +
Sbjct: 307 ENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNE 366
Query: 371 TVSNAMITMYARCGNIQSALLEFSS--VPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
V++A++ MY++ G + +A F + V D+ISWNS+I A+HG+ ++A+E++ +MR
Sbjct: 367 IVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMR 426
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
FKP +T++ +L ACS+AGLV++G +F + L R HYTC+VDL GR G +
Sbjct: 427 KHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRL 486
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
+ N +N D +S + +GA+L AC +HN + + + ++V+E +++G Y++++
Sbjct: 487 KDVTNFIN---CDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMS 543
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
+Y + G+RE+A + +MKE G+KK+PGCSW+++ H+F+ GD SHP+F L +L+
Sbjct: 544 NIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILS 603
Query: 609 LLHTEIER 616
L ++ +
Sbjct: 604 DLRNKMRK 611
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 219/403 (54%), Gaps = 43/403 (10%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-DMFTYNTVIAGL 62
+I EA+ LFD +P+RD VTW +I GY K G + A LF+++ R ++ T+ +++G
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY 119
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
++S + A+ +F M R+VV+WN+MI GY +G ID+AL +F MP +++VSWN ++
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
ALV R+D A + F+ M RDV SWT MV+GL + G++ EAR+LFD MP +++ +WN M
Sbjct: 180 ALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAM 239
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN 242
I GY N + A+ LFQ M +RD SW +I G + +R ++ A F +MPE +W
Sbjct: 240 ITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWT 299
Query: 243 SII----------------SVLIRNGLVK-----------------------EAHSYLEK 263
++I S ++R+G VK + H + K
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISK 359
Query: 264 YPYSNIASWTNVIVG-YFEMGEVGSAIKVFE--LMTTRDVTVWNVMIFGLGENDLGEEGL 320
+ T+ ++ Y + GE+ +A K+F+ L+ RD+ WN MI + G+E +
Sbjct: 360 SVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAI 419
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
+ + QM++ G P T+ ++L CS ++ G + ++
Sbjct: 420 EMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVR 462
>gi|224126355|ref|XP_002329533.1| predicted protein [Populus trichocarpa]
gi|222870242|gb|EEF07373.1| predicted protein [Populus trichocarpa]
Length = 693
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/639 (35%), Positives = 355/639 (55%), Gaps = 48/639 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I E++ LFD MP+R+ V++NVM+ GY + G L A LF +MPER++ ++ +++ GL +
Sbjct: 49 IDESRVLFDIMPERNIVSYNVMLSGYLQCGRLSEARGLFEEMPERNVVSWTSMLCGLADA 108
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
+ A+E+F M R+VV+WN+M++G + N ++EA RVF +P K+VVSWN +I
Sbjct: 109 GRICEARELFKEMPERNVVSWNAMVAGLIKNEDLEEARRVFDEIPEKNVVSWNAMIKGFA 168
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
+M+ A F+EM R+V +WT M+ G R G + EA F ++P ++V +W MI+G
Sbjct: 169 ENGKMEEARVLFEEMEDRNVITWTTMIAGYCRIGDVREAYCFFCRIPERNVVSWTAMISG 228
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTS---------------------WKQL-----INGL-- 217
+ NG G A LF +M R + KQL INGL
Sbjct: 229 FTWNGYYGEALLLFLEMKRRSNIAPNGETFISLAYACAGMRFHHLGKQLHAQLIINGLEY 288
Query: 218 -----------VNSRRIDAAISYF-----KQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
++ + A+ Y K + ++ N +I+ R G V++A
Sbjct: 289 EDYDGRIAKSLIHMYSLFGAMDYAHYVFNKNLNSHAVQSCNHMINGYTRIGQVEKARELF 348
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
+ P + +WT++IVGYF++G V A +FE M +D W MI GL +N+L +
Sbjct: 349 DTIPARDNITWTSMIVGYFDIGNVSEACYLFENMPDKDSVAWTSMISGLVQNELFLKATS 408
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F ++M G P ++T+ + + LD GRQ+H +K + +SN++I+MYA
Sbjct: 409 FLLRMLAHGAPPLSSTYAILFGAAGAIAHLDFGRQLHNMLMKTLSDCDLILSNSLISMYA 468
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CG I A F+++ D+ISWN++I GLA+H A + L++FE M + +P+ +TF+G
Sbjct: 469 KCGEIHDAYSIFTNMIYRDLISWNTMIMGLAHHALANETLKVFETMLQSGTRPNSVTFLG 528
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
+LSACS+AGLV QG F M++ Y +QP HY +++LLGR G + EA L I
Sbjct: 529 ILSACSHAGLVSQGCKLFKAMRDVYAIQPGLEHYISMINLLGRAGKVREAEEL---ILGL 585
Query: 502 GIEVSPTVWGALLGACRI-HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
E + +WGALLG C + N + + A R++EL+P N+ ++ L +Y +CG+ +
Sbjct: 586 PFETNHAIWGALLGVCGVAEKNADIAQHAARRLLELDPLNAPAHVALCNIYAACGKHIEE 645
Query: 561 KRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
+++ +M GV+K PGCSWI +N VFLSGD P+
Sbjct: 646 QKLRKEMGLKGVRKVPGCSWIVLNGNVCVFLSGDKLDPE 684
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 236/510 (46%), Gaps = 71/510 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N ++EA+ +FD++P+++ V+WN MI+G+ +NG ++ A LF +M +R++ T+ T+IA
Sbjct: 137 IKNEDLEEARRVFDEIPEKNVVSWNAMIKGFAENGKMEEARVLFEEMEDRNVITWTTMIA 196
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-- 118
G + +V+ A F + R+VV+W +MISG+ NG EAL +F M + ++ N
Sbjct: 197 GYCRIGDVREAYCFFCRIPERNVVSWTAMISGFTWNGYYGEALLLFLEMKRRSNIAPNGE 256
Query: 119 --------------LVIGALVNCQ---------------------------RMDLAESYF 137
+G ++ Q MD A F
Sbjct: 257 TFISLAYACAGMRFHHLGKQLHAQLIINGLEYEDYDGRIAKSLIHMYSLFGAMDYAHYVF 316
Query: 138 -KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
K + + V S M+NG R G++ +AR+LFD +PA+D W MI GY D G V A
Sbjct: 317 NKNLNSHAVQSCNHMINGYTRIGQVEKARELFDTIPARDNITWTSMIVGYFDIGNVSEAC 376
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG---- 252
LF+ M D+D +W +I+GLV + A S+ +M +S ++L
Sbjct: 377 YLFENMPDKDSVAWTSMISGLVQNELFLKATSFLLRMLAHGAPPLSSTYAILFGAAGAIA 436
Query: 253 ---LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
++ H+ L K +N ++ Y + GE+ A +F M RD+ WN MI
Sbjct: 437 HLDFGRQLHNMLMKTLSDCDLILSNSLISMYAKCGEIHDAYSIFTNMIYRDLISWNTMIM 496
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
GL + L E LK F M +SG P++ TF +L+ CS + G ++ K R+
Sbjct: 497 GLAHHALANETLKVFETMLQSGTRPNSVTFLGILSACSHAGLVSQGCKL----FKAMRDV 552
Query: 369 FTTVSN-----AMITMYARCGNIQSALLEFSSVPI---HDIISWNSI--ICGLAYHGYAE 418
+ +MI + R G ++ A +P H I W ++ +CG+A A+
Sbjct: 553 YAIQPGLEHYISMINLLGRAGKVREAEELILGLPFETNHAI--WGALLGVCGVAEKN-AD 609
Query: 419 KALELFERMRLTDF--KPDDITFVGVLSAC 446
A R+ D P + + +AC
Sbjct: 610 IAQHAARRLLELDPLNAPAHVALCNIYAAC 639
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 242/519 (46%), Gaps = 56/519 (10%)
Query: 62 LMQSDNVQGAKEVFDGMEVRD----VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
++ +Q A+ + D R + W S+++ Y G IDE+ +F MP +++VS+
Sbjct: 8 MLSQQKLQQARNLLDKFPERSRHSRIAHWTSLLTKYSRIGFIDESRVLFDIMPERNIVSY 67
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
N +M++G ++ GR+ EAR LF++MP ++V
Sbjct: 68 N-------------------------------VMLSGYLQCGRLSEARGLFEEMPERNVV 96
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
+W M+ G D G + A +LF++M +R++ SW ++ GL+ + ++ A F ++PE
Sbjct: 97 SWTSMLCGLADAGRICEARELFKEMPERNVVSWNAMVAGLIKNEDLEEARRVFDEIPEKN 156
Query: 238 EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
+WN++I NG ++EA E+ N+ +WT +I GY +G+V A F +
Sbjct: 157 VVSWNAMIKGFAENGKMEEARVLFEEMEDRNVITWTTMIAGYCRIGDVREAYCFFCRIPE 216
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMK-ESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
R+V W MI G N E L F++MK S +P+ TF S+ C+ + LG+Q
Sbjct: 217 RNVVSWTAMISGFTWNGYYGEALLLFLEMKRRSNIAPNGETFISLAYACAGMRFHHLGKQ 276
Query: 357 IHAQAIKIA---RNQFTTVSNAMITMYARCGNIQSALLEFS-SVPIHDIISWNSIICGLA 412
+HAQ I + ++ ++I MY+ G + A F+ ++ H + S N +I G
Sbjct: 277 LHAQLIINGLEYEDYDGRIAKSLIHMYSLFGAMDYAHYVFNKNLNSHAVQSCNHMINGYT 336
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
G EKA ELF+ T D+IT+ ++ G V + Y F+ M +K S
Sbjct: 337 RIGQVEKARELFD----TIPARDNITWTSMIVGYFDIGNVSEACYLFENMPDK-----DS 387
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
+T ++ L + L +A + L + A G + + L GA ++ G
Sbjct: 388 VAWTSMISGLVQNELFLKATSFLLRMLAHGAPPLSSTYAILFGAAGAIAHLDFGRQLHNM 447
Query: 533 VMELEPNNSGVYLILT----EMYLSCGRREDAKRIFAQM 567
+M+ S LIL+ MY CG DA IF M
Sbjct: 448 LMK---TLSDCDLILSNSLISMYAKCGEIHDAYSIFTNM 483
>gi|147841850|emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
Length = 761
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/579 (37%), Positives = 337/579 (58%), Gaps = 26/579 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+RN RI EA+ LFD MPQR+ VTWN MI GY + + A LF++MP+RD+ ++N +I+
Sbjct: 78 IRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMPDRDVVSWNLMIS 137
Query: 61 GLMQSDN--VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
G + V+ + +FD M RD V+WN+MISGY +G +DEAL++F M ++VVSWN
Sbjct: 138 GYVSCRGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWN 197
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD--- 175
++ + ++ A +F M RD AS + +V GL++ G + EA+++ +D
Sbjct: 198 AMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRILLTTRRQDDDK 257
Query: 176 ---VQAWNLMIAGYLDNGCVGVAEDLFQKM------------HDRDLTSWKQLINGLVNS 220
V A+N+++AGY NG V A LF ++ +R++ SW +I V +
Sbjct: 258 GDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKA 317
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
R I +A F QM E +WN++IS +R ++EA ++ P + +W ++I G+
Sbjct: 318 RDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTLTWNSMISGFA 377
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G + A +F + +++ WN MI G N + + + QM G PD T +S
Sbjct: 378 QKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSS 437
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH- 399
VL++CS L LG QIH Q K ++N++ITMY+RCG I A F V +
Sbjct: 438 VLSVCSGFAALHLGMQIHQQITKTVIPDIP-INNSLITMYSRCGAIVEARTIFDEVKLQK 496
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
++ISWN++I G A+HG+A ALELFE M+ +P ITF+ VL+AC++AG V +GR +F
Sbjct: 497 EVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGXVKEGRMHF 556
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
M ++ ++PR H+ +VD++GR G ++EAM+L+N + E VWGALLGACR+
Sbjct: 557 KSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSM---PFEPDKAVWGALLGACRV 613
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTE-MYLSCGRR 557
HNN+++ +A E +M+LEP +S L E L+C +
Sbjct: 614 HNNVELARVAAEALMKLEPESSAPCHGLRERQLLTCKEK 652
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 218/475 (45%), Gaps = 66/475 (13%)
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
D+ + N I L+ R++ A + F M R++ +W M+ G VR + +ARKLFD+MP
Sbjct: 66 DLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMP 125
Query: 173 AKDVQAWNLMIAGYLDNGCVGV----AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+DV +WNLMI+GY+ C G LF +M +RD SW +I+G S R+D A+
Sbjct: 126 DRDVVSWNLMISGYV--SCRGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQ 183
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
F M E +WN++++ ++NG V+ A + + P + AS + ++ G + GE+ A
Sbjct: 184 LFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEA 243
Query: 289 IKVFELMTTRD--------VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
++ L+TTR V +N+++ G G+N ++ + F Q
Sbjct: 244 KRI--LLTTRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQ--------------- 286
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
+P D G++ + RN + N+MI Y + +I SA + F + D
Sbjct: 287 -------IPFYDGGQK---DGGRFERNVVSW--NSMIMCYVKARDIFSARVLFDQMKERD 334
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
ISWN++I G E+A LF+ M PD +T+ ++S + G ++ R F
Sbjct: 335 TISWNTMISGYVRMSDMEEAWMLFQEMP----NPDTLTWNSMISGFAQKGNLELARALFA 390
Query: 461 CMKNKYFLQPRS--AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
+ K + S A Y D G A L ++ G + ++L C
Sbjct: 391 TIPQKNLVSWNSMIAGYENNGDYKG-------ATELYRQMLLQGEKPDRHTLSSVLSVCS 443
Query: 519 IHNNIKVG-----EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+ +G +I + ++ NNS L MY CG +A+ IF ++K
Sbjct: 444 GFAALHLGMQIHQQITKTVIPDIPINNS-----LITMYSRCGAIVEARTIFDEVK 493
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/578 (34%), Positives = 330/578 (57%), Gaps = 35/578 (6%)
Query: 35 GFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV-RDVVTWNSMISGY 93
G + +A LF++ P+RD+ ++ ++A + + A+ +FD + R+VVTW +++SGY
Sbjct: 49 GRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGY 108
Query: 94 VCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVN 153
G +DEA +F MP ++VVSWN ++ A + R+ A + F M RD SW I++
Sbjct: 109 ARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLA 168
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL 213
LVR G + +ARKLFD+MP ++V AW M+AG +G V A LF M +R++ SW +
Sbjct: 169 ALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMPERNVVSWNAM 228
Query: 214 INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWT 273
I+G + RID A F +MP +WN +I+ I++ ++ A +K P N+ +WT
Sbjct: 229 ISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWT 288
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++ GY + + +A+++F M EG++ P
Sbjct: 289 TMMNGYLQSMQSETALQIFNGMLV--------------------EGIR-----------P 317
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+ TF + CS+L L G+Q+H K + T + + ++ +YA+CG I+ A F
Sbjct: 318 NQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVF 377
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
D+ISWN +I A+HG +A+ L+E+M+ +KP+D+T+VG+LSACS++GLVD
Sbjct: 378 DLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVD 437
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+G F+ M + R HYTC++DL R G + +A L++ ++ +E S TVW AL
Sbjct: 438 EGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLK---VEPSSTVWNAL 494
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
LG C H N +G++A ++E EPNN+G Y +L +Y S G+ ++A +I ++M + G+K
Sbjct: 495 LGGCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLK 554
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLH 611
K+PGCSWI++ + HVF+S D SH + + LL +H
Sbjct: 555 KQPGCSWIEVENKVHVFVSRDKSHSESDLINSLLQDIH 592
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/457 (30%), Positives = 230/457 (50%), Gaps = 50/457 (10%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-PERDMFTYNTVIAGLM 63
R+ +A+ LFD+ P RD V+W ++ Y + G L +A LF++ R++ T+ +++G
Sbjct: 50 RVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYA 109
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
++ V A+ +F M R+VV+WN+M+ Y G + +A +F GMP++D SWN+++ A
Sbjct: 110 RAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLAA 169
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
LV MD A F M R+V +WT MV G+ R G + EAR LFD MP ++V +WN MI
Sbjct: 170 LVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMPERNVVSWNAMI 229
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS 243
+GY N + A DLF KM RD+ SW +I G + R ++ A F +MP TW +
Sbjct: 230 SGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTT 289
Query: 244 II-----------SVLIRNGLV---------------------------KEAHSYLEKYP 265
++ ++ I NG++ ++ H + K
Sbjct: 290 MMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTS 349
Query: 266 YSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
+ + ++ Y + GE+ A KVF+L +DV WN MI + +G E + +
Sbjct: 350 FQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYE 409
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK----IARNQFTTVSNAMITMY 380
+M+E G P++ T+ +L+ CS +D G +I +K R++ T +I +
Sbjct: 410 KMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTC---LIDLC 466
Query: 381 ARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHG 415
+R G + A L+ F V + WN+++ G HG
Sbjct: 467 SRAGRLGDAKRLIHFLKVEPSSTV-WNALLGGCNSHG 502
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 175/390 (44%), Gaps = 75/390 (19%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ + +A+ LFD+MP+R+ + W M+ G ++G +D A LF+ MPER++ ++N +I+
Sbjct: 171 VRSGNMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMPERNVVSWNAMIS 230
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ + A ++F M RD+ +WN MI+G++ + ++ A +F MP ++V++W +
Sbjct: 231 GYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTM 290
Query: 121 IGALVNCQRMDLAESYFKEM-------------GARDVAS-------------------- 147
+ + + + A F M GA D S
Sbjct: 291 MNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSF 350
Query: 148 ------WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+ ++N + G I ARK+FD KDV +WN MIA Y +G A L++K
Sbjct: 351 QFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEK 410
Query: 202 MHDR-----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
M ++ D+T + L++ +S +D + F+ M V R+ V++
Sbjct: 411 MQEKGYKPNDVT-YVGLLSACSHSGLVDEGLRIFEYM-------------VKDRSIAVRD 456
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDL 315
H +T +I G +G A ++ + TVWN ++ G N
Sbjct: 457 EH-------------YTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGC--NSH 501
Query: 316 GEEGLKFFVQMKESGPSPDNA-TFTSVLTI 344
G E + P+NA T+T + I
Sbjct: 502 GNESIGDLAARNLLEAEPNNAGTYTLLCNI 531
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 192/481 (39%), Gaps = 98/481 (20%)
Query: 167 LFDKMPAKDV----QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+D A DV Q N +A G V A LF + DRD+ SW L+
Sbjct: 22 FYDSAAAVDVSGHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGM 81
Query: 223 IDAAISYFKQMPETCEK--TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
+ A + F + P+ TW +++S R G V EA + ++ P N+ SW ++ Y
Sbjct: 82 LHDARALFDR-PDARRNVVTWTALLSGYARAGRVDEAEALFQRMPERNVVSWNTMLEAYT 140
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
G V A +F+ M RD WN+++ L + ++ K F +M P + +T+
Sbjct: 141 SAGRVRDAWTLFDGMPVRDAGSWNILLAALVRSGNMDKARKLFDRM----PERNVMAWTT 196
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIH 399
++ + ++D A+A+ + VS NAMI+ YAR I A F +P
Sbjct: 197 MVAGIARSGSVD-----EARALFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTR 251
Query: 400 DIISWNSIICGL--------------------------AYHGY-----AEKALELFERMR 428
DI SWN +I G +GY +E AL++F M
Sbjct: 252 DIASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGML 311
Query: 429 LTDFKPDDITFVGVLSACS---------------------------------YA--GLVD 453
+ +P+ +TF+G + ACS YA G +
Sbjct: 312 VEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIR 371
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
R FD K K + + ++ G+ EA++L +++ G + + + L
Sbjct: 372 LARKVFDLSKEKDVIS-----WNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGL 426
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGV------YLILTEMYLSCGRREDAKRIFAQM 567
L AC H+ + V E G R+ E + + Y L ++ GR DAKR+ +
Sbjct: 427 LSACS-HSGL-VDE--GLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFL 482
Query: 568 K 568
K
Sbjct: 483 K 483
>gi|449454362|ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/595 (35%), Positives = 351/595 (58%), Gaps = 20/595 (3%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R RI EA+ LFD +T+TWN MI Y K + A LF +MP RD+ ++N +++
Sbjct: 68 IRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIVSWNLMLS 127
Query: 61 GLMQSDN--VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
G + V+ A+ +FD M D V+WN+M+SGY +G++D+A +F+ MP ++VVSWN
Sbjct: 128 GYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNEMPERNVVSWN 187
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM-----PA 173
++ + ++ A +FK M RD AS +++GL++ ++VEA ++ +
Sbjct: 188 AMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALISGLIQNDKLVEAERILLQYGGNVGKG 247
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKM--------HDRDLTSWKQLINGLVNSRRIDA 225
V A+N +IAGY G A LF ++ R++ SW +I V + I +
Sbjct: 248 DLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVS 307
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEV 285
A F +M E +WN++IS ++ +KEA + + P + SW +I G+ E+G +
Sbjct: 308 ARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSL 367
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A +F+ + + + WN MI G +N+ + + F+QM+ G PD T +S+L+ C
Sbjct: 368 KLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSAC 427
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISW 404
+ L L LG QIH Q + A ++N+++TMY+RCG I A + F + + D+ISW
Sbjct: 428 AGLVDLVLGTQIH-QLVTKAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISW 486
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
N++I G AYHG+A +AL+LF+ M+ + +P ITF+ VL+AC++AGL+++GR F+ M N
Sbjct: 487 NAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVN 546
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
+ ++P+ HY +VD++GR G ++EAM+L+N + E VWGALLGAC++HNN++
Sbjct: 547 THGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPC---EPDKAVWGALLGACKVHNNVE 603
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
+ A E +M+L+P +S Y++L MY GR +DA + M++N V+K+ G S
Sbjct: 604 MARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYS 658
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/603 (33%), Positives = 343/603 (56%), Gaps = 39/603 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-ERDMFTYNTVIA 60
++ R+++A+ LFD MP R+ +W +M+ Y + G L A L ++MP E+ YNT+I+
Sbjct: 85 QHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMIS 144
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ + A + M D+V+WNS++ G + N I +++ F MP KD+VSWNL+
Sbjct: 145 GYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLM 204
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ V +D+A ++F + + +V SW +VNG + GR+ EAR+LFD+MP ++V AWN
Sbjct: 205 LEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWN 264
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE--TCE 238
++++GY+ V A +LF +M +++ SW +++G V S ++ A +MP
Sbjct: 265 VLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGA 324
Query: 239 KT-----------------------------WNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
KT WN++IS ++ G++ EA ++ P ++
Sbjct: 325 KTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDM 384
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
SW +I G + G++ A +F M R+ WN +I G +N L E L+ F+ M+
Sbjct: 385 ISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRD 444
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
S D T+ L+ ++L TL +GRQ H+ ++ ++ NA+I+ YA+CG + A
Sbjct: 445 AKSADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEA 504
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F + + DI+SWN++I G A +G + + +F M +PD+IT V VLSACS+A
Sbjct: 505 RQVFDEMVVQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHA 564
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT- 508
GL+D+G ++F+ M Y L+P + HYTC+VDLLGR G + EA L+ G+++ P
Sbjct: 565 GLIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREAFELVQ-----GMQIQPNA 619
Query: 509 -VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
VWGALLGACR+H N ++ +A E++ ELEP + Y++L+ + + G+ +DA ++ M
Sbjct: 620 GVWGALLGACRVHKNHEIAWLAAEKLFELEPCKASNYVLLSNICVEAGKWDDADKVRVLM 679
Query: 568 KEN 570
KE+
Sbjct: 680 KES 682
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 230/440 (52%), Gaps = 36/440 (8%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+F N + L +S + A+ +F+ M R+VV++N+M+S +G + EA R+F MP
Sbjct: 11 VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR 70
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
++ VSWN ++ A R++ A F M AR+ SWTIMV+ VR G + AR+L D+M
Sbjct: 71 RNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRM 130
Query: 172 PAKDVQA-WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
P + A +N MI+GY NG A L Q+M D+ SW ++ GL+ + I ++ +F
Sbjct: 131 PGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFF 190
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+MP+ +WN ++ +R G + A ++ + P N+ SW N++ GY + G +G A +
Sbjct: 191 DEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARE 250
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT------- 343
+F+ M R+V WNV++ G + E F++M P ++ ++T++++
Sbjct: 251 LFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEM----PEKNSISWTTMVSGFVRSGK 306
Query: 344 ------ICSDLPTLDLGRQ-------IHAQAIKIARNQFTTVS-------NAMITMYARC 383
+ S +P+ ++G + + + I AR F + N MI+ Y +C
Sbjct: 307 LQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQC 366
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G + A++ F +P D+ISWN++I G A G KA +F +M+ + + +++ ++
Sbjct: 367 GMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMK----RRNTVSWNSII 422
Query: 444 SACSYAGLVDQGRYYFDCMK 463
S GL + +F M+
Sbjct: 423 SGFVQNGLFVEALQHFMLMR 442
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 176/401 (43%), Gaps = 29/401 (7%)
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
K+ A V N + +G + A LF++M R++ S+ +++ L + R+ A
Sbjct: 5 KLTASAVFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRL 64
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
F +MP +WN+++ ++G V++A + P N SWT ++ Y GE+ A
Sbjct: 65 FDEMPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLAR 124
Query: 290 KVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
++ + M + +N MI G +N E+ + +M P+PD ++ SVL +
Sbjct: 125 ELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEM----PAPDIVSWNSVLG--GLI 178
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
++ R + Q ++ N M+ Y R G++ A FS +P ++ISW +++
Sbjct: 179 RNEEISRSV--QFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLV 236
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
G G +A ELF+RM + ++ G + V+ F M K
Sbjct: 237 NGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQ----VEAAYNLFIEMPEK--- 289
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
S +T +V R G + EA ++L+++ +D + + +H +K I
Sbjct: 290 --NSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTAL---------MHGYLKSNLI 338
Query: 529 AGERVM--ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
R + + ++ + + Y+ CG ++A +F QM
Sbjct: 339 DDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQM 379
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/558 (36%), Positives = 320/558 (57%), Gaps = 5/558 (0%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKD 113
N +A L + V A+ +FDGM RDVV+W +M++ Y G++ EA RV P ++
Sbjct: 45 NWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEA-RVLFDRPDARRN 103
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
VV+W ++ +R+D AE+ F+ M R+V SW M+ GR+ +A LF++MP
Sbjct: 104 VVTWTALLSGYARARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPV 163
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
+D +WN+++ G + +G + A +F++M RD+ SW +I+GL + +D A F M
Sbjct: 164 RDAGSWNILLCGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAM 223
Query: 234 PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE 293
PE +WN++IS RN ++EA K P ++ASW +I G+ + ++ SA ++F+
Sbjct: 224 PERNVVSWNAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQLFD 283
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
M R+V W M+ G + E LK F M G P+ TF L CS+L L
Sbjct: 284 EMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCE 343
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
G+Q+H K T V + ++ +YA+CG I+ A F D+ISWN II A+
Sbjct: 344 GQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAYAH 403
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSA 473
HG+ +A+ L++ M+ +KP+D T+VG+LSACS+AGLVD+G F+ M + R
Sbjct: 404 HGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDE 463
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV 533
HYTC+VDL R G +++A L++ + S TVW ALLG C H N +G++A + +
Sbjct: 464 HYTCLVDLCSRAGRLEDAKRLISWFKIK--PTSSTVWSALLGGCNSHGNESIGDLAAKHL 521
Query: 534 MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSG 593
+E EP+N+G Y +L +Y S G+ ++A I ++M G+KK+PGCSWI++ + HVF+S
Sbjct: 522 LEAEPDNAGTYTLLCNIYASAGKWKEAAEIRSEMNVRGLKKQPGCSWIEVANKVHVFVSR 581
Query: 594 DSSHPKFHRLRYLLNLLH 611
D SH + + LL +H
Sbjct: 582 DKSHSESDLINDLLQDIH 599
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 233/457 (50%), Gaps = 49/457 (10%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-PERDMFTYNTVIAGLM 63
R+ +A+ LFD MP RD V+W M+ Y + G L A LF++ R++ T+ +++G
Sbjct: 56 RVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRPDARRNVVTWTALLSGYA 115
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
++ V A+ +F+GM R+VV+WN+M+ Y G +++A +F+ MP++D SWN+++
Sbjct: 116 RARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCG 175
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
LV ++ A F+ M RDV SWT M++GL R G + +A LFD MP ++V +WN MI
Sbjct: 176 LVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPERNVVSWNAMI 235
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS 243
+GY N + A DLF KM RD+ SW +I G + ++ + +A F +MP+ TW +
Sbjct: 236 SGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQLFDEMPKRNVITWTT 295
Query: 244 II----------------SVLIRNGLVKEAHSYLEKY-PYSNIASW-------------- 272
++ + ++ G+ ++L SN+A+
Sbjct: 296 MMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEGQQVHQMICKTP 355
Query: 273 --------TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
+ ++ Y + GE+ A VF+ +D+ WN +I + G E + +
Sbjct: 356 SQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAYAHHGFGIEAMHLYK 415
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK----IARNQFTTVSNAMITMY 380
M+E+G P++AT+ +L+ CS +D G +I +K + R++ T ++ +
Sbjct: 416 NMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEHYT---CLVDLC 472
Query: 381 ARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHG 415
+R G ++ A L+ + + W++++ G HG
Sbjct: 473 SRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCNSHG 509
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 134/515 (26%), Positives = 219/515 (42%), Gaps = 59/515 (11%)
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
L + A VNC + + G V V L GR+ +AR+LFD MP +DV +
Sbjct: 17 LCLAATVNC--ISNNAAPAASAGVNHVQDSNWRVAELAAAGRVSDARRLFDGMPDRDVVS 74
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMH-DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
W M+A Y G + A LF + R++ +W L++G +RR+D A + F+ M E
Sbjct: 75 WTAMVAAYARRGMLQEARVLFDRPDARRNVVTWTALLSGYARARRVDEAEALFEGMAERN 134
Query: 238 EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
+WN+++ G V++A + + P + SW ++ G G + A K+FE M
Sbjct: 135 VVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCGLVRSGSLERARKMFERMPV 194
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
RDV W MI GL N ++ F M E NA + LDL ++
Sbjct: 195 RDVMSWTTMISGLARNGSVDDAWVLFDAMPERNVVSWNAMISGYARNHRIEEALDLFTKM 254
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
+ + N MIT + + +++SA F +P ++I+W +++ G +
Sbjct: 255 PIRDV--------ASWNIMITGFIQNKDLKSARQLFDEMPKRNVITWTTMMNGYLQCMQS 306
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR--YYFDCMKNKYF-------- 467
E AL+LF M + +P+ +TF+G L ACS + +G+ + C F
Sbjct: 307 EMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEGQQVHQMICKTPSQFDTFVESTL 366
Query: 468 -----------LQPRSAHYTCVVDLLGRFGLID---------EAMNLLNEIRADGIEVSP 507
L ++ DL+ G+I EAM+L ++ +G + +
Sbjct: 367 MNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAYAHHGFGIEAMHLYKNMQENGYKPND 426
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGV-----YLILTEMYLSCGRREDAKR 562
+ LL AC + G E +++ +NS V Y L ++ GR EDAKR
Sbjct: 427 ATYVGLLSACSHAGLVDEGLKIFESMVK---DNSIVVRDEHYTCLVDLCSRAGRLEDAKR 483
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
+ + K +K W L G +SH
Sbjct: 484 LISWFK---IKPTSSTVW-------SALLGGCNSH 508
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 180/370 (48%), Gaps = 34/370 (9%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ ++ A+ +F++MP RD ++W MI G +NG +D+A LF+ MPER++ ++N +I+
Sbjct: 177 VRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPERNVVSWNAMIS 236
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ ++ A ++F M +RDV +WN MI+G++ N + A ++F MP ++V++W +
Sbjct: 237 GYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQLFDEMPKRNVITWTTM 296
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR---------EGRIVEARKLFDKM 171
+ + C + ++A F M + + + G + EG+ V ++ K
Sbjct: 297 MNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEGQQVH--QMICKT 354
Query: 172 PAK-DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
P++ D + ++ Y G + +A ++F ++DL SW +I + A+ +
Sbjct: 355 PSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAYAHHGFGIEAMHLY 414
Query: 231 KQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEKYPYSNI-----ASWTNVIVGYFE 281
K M E K T+ ++S GLV E E N +T ++
Sbjct: 415 KNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEHYTCLVDLCSR 474
Query: 282 MGEVGSA---IKVFELMTTRDVTVWNVMIFGL---GENDLGEEGLKFFVQMKESGPSPDN 335
G + A I F++ T TVW+ ++ G G +G+ K ++ + PDN
Sbjct: 475 AGRLEDAKRLISWFKIKPTSS-TVWSALLGGCNSHGNESIGDLAAKHLLEAE-----PDN 528
Query: 336 A-TFTSVLTI 344
A T+T + I
Sbjct: 529 AGTYTLLCNI 538
>gi|356510733|ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 649
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/604 (35%), Positives = 349/604 (57%), Gaps = 27/604 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ RI EA+ LFD M +RDTVTWN MI GY + + A LF++MP RD+ ++N +++
Sbjct: 49 IRSGRISEARTLFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPRRDVVSWNLIVS 108
Query: 61 GLMQ---SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
G S V+ + +F+ M RD V+WN++ISGY NG +D+AL++F+ MP + VS+
Sbjct: 109 GYFSCCGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPEHNAVSY 168
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD-- 175
N VI + ++ A +F+ M D S +++GLVR G + A + + D
Sbjct: 169 NAVITGFLLNGDVESAVGFFRTMPEHDSTSLCALISGLVRNGELDLAAGILRECGNGDDG 228
Query: 176 ----VQAWNLMIAGYLDNGCVGVAEDLF-------------QKMHDRDLTSWKQLINGLV 218
V A+N +IAGY G V A LF ++ R++ SW ++ V
Sbjct: 229 KDDLVHAYNTLIAGYGQRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCYV 288
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+ I A F +M E +WN++IS ++ ++EA + P ++ SW ++I G
Sbjct: 289 KAGDIVFARELFDRMVERDNCSWNTLISCYVQISNMEEASKLFREMPSPDVLSWNSIISG 348
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ G++ A FE M +++ WN +I G +N+ + +K F +M+ G PD T
Sbjct: 349 LAQKGDLNLAKDFFERMPHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGERPDKHTL 408
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+SV+++ + L L LG+Q+H K + ++N++ITMY+RCG I A F+ + +
Sbjct: 409 SSVISVSTGLVDLYLGKQLHQLVTKTVLPD-SPINNSLITMYSRCGAIVDACTVFNEIKL 467
Query: 399 H-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ D+I+WN++I G A HG A +ALELF+ M+ P ITF+ VL+AC++AGLV++G
Sbjct: 468 YKDVITWNAMIGGYASHGSAAEALELFKLMKRLKIHPTYITFISVLNACAHAGLVEEGWR 527
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
F M N Y ++PR H+ +VD+LGR G + EAM+L+N + + VWGALLGAC
Sbjct: 528 QFKSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLINTM---PFKPDKAVWGALLGAC 584
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
R+HNN+++ +A + ++ LEP +S Y++L MY + G+ +DA+ + M+E VKK+ G
Sbjct: 585 RVHNNVELALVAADALIRLEPESSAPYVLLYNMYANLGQWDDAESVRVLMEEKNVKKQAG 644
Query: 578 CSWI 581
SW+
Sbjct: 645 YSWV 648
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/489 (28%), Positives = 229/489 (46%), Gaps = 70/489 (14%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
N ++ L++S + A+ +FD M+ RD VTWNSMISGYV I A ++F MP +DVV
Sbjct: 42 NKKLSNLIRSGRISEARTLFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPRRDVV 101
Query: 116 SWNLVIGALVNC---QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
SWNL++ +C + ++ F+ M RD SW +++G + GR+ +A KLF+ MP
Sbjct: 102 SWNLIVSGYFSCCGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMP 161
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+ ++N +I G+L NG V A F+ M + D TS LI+GLV + +D A ++
Sbjct: 162 EHNAVSYNAVITGFLLNGDVESAVGFFRTMPEHDSTSLCALISGLVRNGELDLAAGILRE 221
Query: 233 M------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-------------NIASWT 273
+ +N++I+ + G V+EA + P N+ SW
Sbjct: 222 CGNGDDGKDDLVHAYNTLIAGYGQRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWN 281
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++++ Y + G++ A ++F+ M RD WN +I + EE K F +M PSP
Sbjct: 282 SMMMCYVKAGDIVFARELFDRMVERDNCSWNTLISCYVQISNMEEASKLFREM----PSP 337
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D ++ N++I+ A+ G++ A F
Sbjct: 338 DVLSW-----------------------------------NSIISGLAQKGDLNLAKDFF 362
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+P ++ISWN+II G + + A++LF M+L +PD T V+S + GLVD
Sbjct: 363 ERMPHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGERPDKHTLSSVISVST--GLVD 420
Query: 454 --QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
G+ + P S ++ + R G I +A + NEI+ + W
Sbjct: 421 LYLGKQLHQLVTKTVL--PDSPINNSLITMYSRCGAIVDACTVFNEIK---LYKDVITWN 475
Query: 512 ALLGACRIH 520
A++G H
Sbjct: 476 AMIGGYASH 484
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 174/453 (38%), Gaps = 83/453 (18%)
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
C V+ + L + ++ L+ S RI A + F M TWNS+IS ++
Sbjct: 22 CCHVSASPTHNYNSSPLNQSNKKLSNLIRSGRISEARTLFDSMKRRDTVTWNSMISGYVQ 81
Query: 251 NGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE---VGSAIKVFELMTTRDVTVWNVMI 307
+ A ++ P ++ SW ++ GYF V ++FELM RD WN +I
Sbjct: 82 RREIARARQLFDEMPRRDVVSWNLIVSGYFSCCGSRFVEEGRRLFELMPQRDCVSWNTVI 141
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL---------------------TICS 346
G +N ++ LK F M E NA T L ++C+
Sbjct: 142 SGYAKNGRMDQALKLFNAMPEHNAVSYNAVITGFLLNGDVESAVGFFRTMPEHDSTSLCA 201
Query: 347 DLP------TLDLGRQIHAQAIK--IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+ LDL I + ++ N +I Y + G+++ A F +P
Sbjct: 202 LISGLVRNGELDLAAGILRECGNGDDGKDDLVHAYNTLIAGYGQRGHVEEARRLFDVIPD 261
Query: 399 -------------HDIISWNSIICGLAYHGYAEKALELFERMRLTD-------------- 431
+++SWNS++ G A ELF+RM D
Sbjct: 262 DDDDGNEGKRRFRRNVVSWNSMMMCYVKAGDIVFARELFDRMVERDNCSWNTLISCYVQI 321
Query: 432 ---------FK----PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS--AHYT 476
F+ PD +++ ++S + G ++ + +F+ M +K + + A Y
Sbjct: 322 SNMEEASKLFREMPSPDVLSWNSIISGLAQKGDLNLAKDFFERMPHKNLISWNTIIAGYE 381
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
D G L E M L E R D +S +V G ++ ++ ++ + V+
Sbjct: 382 KNEDYKGAIKLFSE-MQLEGE-RPDKHTLS-SVISVSTGLVDLYLGKQLHQLVTKTVLPD 438
Query: 537 EP-NNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
P NNS L MY CG DA +F ++K
Sbjct: 439 SPINNS-----LITMYSRCGAIVDACTVFNEIK 466
>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Cucumis sativus]
Length = 711
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/654 (33%), Positives = 365/654 (55%), Gaps = 44/654 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
RN I+EA+++F++MP ++TV+W ++ Y +N ++ A +FN++P+ ++ +YN +I
Sbjct: 59 RNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVASYNAMITA 118
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ + V A E+F M R+ V++ +MI+G+V G+ D A ++ P+ +VS N++I
Sbjct: 119 YHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMFDMAEKLHREKPV--IVSSNVLI 176
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
R++ A F M +DV SW+ M++GL R G+IVEARKLFDKMP ++V W L
Sbjct: 177 NGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTL 236
Query: 182 MIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQL---------------INGLVNS-- 220
MI GY+ + LF M + + T+ L I+GLV S
Sbjct: 237 MIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLG 296
Query: 221 ------------------RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLE 262
IDAA F M + TWNS+I+ +++G +++A E
Sbjct: 297 FDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFE 356
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
P ++ SWT +I G+ G + I +F++M +D W +I GL + E +
Sbjct: 357 NMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGLVSIEEYEIAFHW 416
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F++M +S P+ T + VL+ + + L+ G QIHA K++ ++ N++++MY++
Sbjct: 417 FIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSLVSMYSK 476
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CGN+ AL F + + +++++N+II GLA +G ++ALE+F +M+ P+ ITF+GV
Sbjct: 477 CGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNHITFLGV 536
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
LSAC + GLV++GR YFD M++ Y +QP HY C+VDLL R G+ DEA++L++ + D
Sbjct: 537 LSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLVSSMPFDP 596
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
+ VWGA+LGA H + V E+A + + ELEPN++ Y+IL+ ++ G +
Sbjct: 597 HQ---GVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVILSNLHSISGDERKHEL 653
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
I K G+KK PGCSWI + D H+F +G S + ++ L E+ R
Sbjct: 654 IRLMKKSRGLKKSPGCSWIILKDEVHLFHAGHQSIKNIKEMTEIIYALAEEVGR 707
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 220/490 (44%), Gaps = 49/490 (10%)
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
+V NS I+ NG I EA +F+ MP K+ VSW ++ A ++ A F ++
Sbjct: 47 LVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPD 106
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
+VAS+ M+ R + EA +LF MP ++ ++ MI G++ G +AE L ++
Sbjct: 107 PNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMFDMAEKLHRE- 165
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLE 262
+ S LING R++ A+ F M E +W+S+IS L R G + EA +
Sbjct: 166 -KPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFD 224
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
K P N+ +WT +I GY +M + ++G
Sbjct: 225 KMPDRNVVTWTLMIDGYMKM-------------------------------NFLKDGFIL 253
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F+ M+ G + T T +L C G QIH + + + ++N++ITMY+R
Sbjct: 254 FLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSR 313
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
C +I +A +F + DI++WNS+I G G EKA+ LFE M + D +++ +
Sbjct: 314 CYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMP----QKDVVSWTTL 369
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
+ + G +D+ F M K + +T V+ L + A + ++
Sbjct: 370 ICGFASEGRIDEFIGLFQMMPEK-----DAIAWTAVISGLVSIEEYEIAFHWFIKMLQSV 424
Query: 503 IEVSPTVWGALLGA----CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
I+ + +L A ++ +++ I + ME N+ + L MY CG +
Sbjct: 425 IKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSME---NDLSIQNSLVSMYSKCGNVD 481
Query: 559 DAKRIFAQMK 568
DA ++F +K
Sbjct: 482 DALKMFYYIK 491
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 49/314 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+++ +++A LF+ MPQ+D V+W +I G+ G +D + LF MPE+D + VI+
Sbjct: 343 VQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVIS 402
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
GL+ + + A F M ++ V+ N+ V + A +++ L
Sbjct: 403 GLVSIEEYEIAFHWFIKM-LQSVIKPNAFTLSCVLSAGASMA-----------ILNQGLQ 450
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I A+V M+ D++ +V+ + G + +A K+F + +V A+N
Sbjct: 451 IHAIVTKMSME-----------NDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYN 499
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQM--- 233
+I G NG A ++F KM D L ++ +++ V+ ++ YF M
Sbjct: 500 TIITGLAQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSL 559
Query: 234 ----PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI---------ASWTNVIVGYF 280
PE + ++ +L R G+ EA S + P+ ASWT++ +
Sbjct: 560 YDIQPE--PDHYACMVDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVA 617
Query: 281 EMGEVGSAIKVFEL 294
E+ +A +FEL
Sbjct: 618 EL----AAQNLFEL 627
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 96/242 (39%), Gaps = 43/242 (17%)
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
A + ++F N+ IT R G I+ A F+ +P + +SW +++ A + K
Sbjct: 37 SATRQKSSKFLVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINK 96
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A E+F ++ P+ ++ +++A +VD+ F M Q S Y ++
Sbjct: 97 AREVFNKIP----DPNVASYNAMITAYHRRNMVDEAFELFSSMP-----QRNSVSYATMI 147
Query: 480 DLLGRFGLIDEAMNLLNE-----------------------IRA-DGIEVSPTV-WGALL 514
G+ D A L E +R DG+ V W +++
Sbjct: 148 TGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMI 207
Query: 515 -GACRIHNNIKVGEIAGERVM--ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
G CR VG+I R + ++ N + ++ + Y+ +D +F M+ G
Sbjct: 208 SGLCR------VGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREG 261
Query: 572 VK 573
V+
Sbjct: 262 VE 263
>gi|449523934|ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/595 (35%), Positives = 350/595 (58%), Gaps = 20/595 (3%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R RI EA+ LFD +T+TWN MI Y K + A LF +MP RD+ ++N +++
Sbjct: 68 IRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIVSWNLMLS 127
Query: 61 GLMQSDN--VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
G + V+ A+ +FD M D V+WN+M+SGY +G +D+A +F+ MP ++VVSWN
Sbjct: 128 GYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGTMDKAEELFNEMPERNVVSWN 187
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM-----PA 173
++ + ++ A +FK M RD AS +V+GL++ ++VEA ++ +
Sbjct: 188 AMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALVSGLIQNDKLVEAERILLQYGGNVGKG 247
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKM--------HDRDLTSWKQLINGLVNSRRIDA 225
V A+N +IAGY G A LF ++ R++ SW +I V + I +
Sbjct: 248 DLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVS 307
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEV 285
A F +M E +WN++IS ++ +KEA + + P + SW +I G+ E+G +
Sbjct: 308 ARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSL 367
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A +F+ + + + WN MI G +N+ + + F+QM+ G PD T +S+L+ C
Sbjct: 368 KLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSAC 427
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISW 404
+ L L LG QIH Q + A ++N+++TMY+RCG I A + F + + D+ISW
Sbjct: 428 AGLVDLVLGTQIH-QLVTKAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISW 486
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
N++I G AYHG+A +AL+LF+ M+ + +P ITF+ VL+AC++AGL+++GR F+ M N
Sbjct: 487 NAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVN 546
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
+ ++P+ HY +VD++GR G ++EAM+L+N + E VWGALLGAC++HNN++
Sbjct: 547 THGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPC---EPDKAVWGALLGACKVHNNVE 603
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
+ A E +M+L+P +S Y++L MY GR +DA + M++N V+K+ G S
Sbjct: 604 MARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYS 658
>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like, partial [Cucumis sativus]
Length = 719
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/654 (33%), Positives = 365/654 (55%), Gaps = 44/654 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
RN I+EA+++F++MP ++TV+W ++ Y +N ++ A +FN++P+ ++ +YN +I
Sbjct: 67 RNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVASYNAMITA 126
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ + V A E+F M R+ V++ +MI+G+V G+ D A ++ P+ +VS N++I
Sbjct: 127 YHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMFDMAEKLHREKPV--IVSSNVLI 184
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
R++ A F M +DV SW+ M++GL R G+IVEARKLFDKMP ++V W L
Sbjct: 185 NGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTL 244
Query: 182 MIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQL---------------INGLVNS-- 220
MI GY+ + LF M + + T+ L I+GLV S
Sbjct: 245 MIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLG 304
Query: 221 ------------------RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLE 262
IDAA F M + TWNS+I+ +++G +++A E
Sbjct: 305 FDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFE 364
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
P ++ SWT +I G+ G + I +F++M +D W +I GL + E +
Sbjct: 365 NMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGLVSIEEYEIAFHW 424
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F++M +S P+ T + VL+ + + L+ G QIHA K++ ++ N++++MY++
Sbjct: 425 FIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSLVSMYSK 484
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CGN+ AL F + + +++++N+II GLA +G ++ALE+F +M+ P+ ITF+GV
Sbjct: 485 CGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNHITFLGV 544
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
LSAC + GLV++GR YFD M++ Y +QP HY C+VDLL R G+ DEA++L++ + D
Sbjct: 545 LSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLVSSMPFDP 604
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
+ VWGA+LGA H + V E+A + + ELEPN++ Y+IL+ ++ G +
Sbjct: 605 HQ---GVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVILSNLHSISGDERKHEL 661
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
I K G+KK PGCSWI + D H+F +G S + ++ L E+ R
Sbjct: 662 IRLMKKSRGLKKSPGCSWIILKDEVHLFHAGHQSIKNIKEMTEIIYALAEEVGR 715
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 220/490 (44%), Gaps = 49/490 (10%)
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
+V NS I+ NG I EA +F+ MP K+ VSW ++ A ++ A F ++
Sbjct: 55 LVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPD 114
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
+VAS+ M+ R + EA +LF MP ++ ++ MI G++ G +AE L ++
Sbjct: 115 PNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMFDMAEKLHRE- 173
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLE 262
+ S LING R++ A+ F M E +W+S+IS L R G + EA +
Sbjct: 174 -KPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFD 232
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
K P N+ +WT +I GY +M + ++G
Sbjct: 233 KMPDRNVVTWTLMIDGYMKM-------------------------------NFLKDGFIL 261
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F+ M+ G + T T +L C G QIH + + + ++N++ITMY+R
Sbjct: 262 FLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSR 321
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
C +I +A +F + DI++WNS+I G G EKA+ LFE M + D +++ +
Sbjct: 322 CYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMP----QKDVVSWTTL 377
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
+ + G +D+ F M K + +T V+ L + A + ++
Sbjct: 378 ICGFASEGRIDEFIGLFQMMPEK-----DAIAWTAVISGLVSIEEYEIAFHWFIKMLQSV 432
Query: 503 IEVSPTVWGALLGA----CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
I+ + +L A ++ +++ I + ME N+ + L MY CG +
Sbjct: 433 IKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSME---NDLSIQNSLVSMYSKCGNVD 489
Query: 559 DAKRIFAQMK 568
DA ++F +K
Sbjct: 490 DALKMFYYIK 499
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 49/314 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+++ +++A LF+ MPQ+D V+W +I G+ G +D + LF MPE+D + VI+
Sbjct: 351 VQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVIS 410
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
GL+ + + A F M ++ V+ N+ V + A +++ L
Sbjct: 411 GLVSIEEYEIAFHWFIKM-LQSVIKPNAFTLSCVLSAGASMA-----------ILNQGLQ 458
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I A+V M+ D++ +V+ + G + +A K+F + +V A+N
Sbjct: 459 IHAIVTKMSME-----------NDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYN 507
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQM--- 233
+I G NG A ++F KM D L ++ +++ V+ ++ YF M
Sbjct: 508 TIITGLAQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSL 567
Query: 234 ----PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI---------ASWTNVIVGYF 280
PE + ++ +L R G+ EA S + P+ ASWT++ +
Sbjct: 568 YDIQPEP--DHYACMVDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVA 625
Query: 281 EMGEVGSAIKVFEL 294
E+ +A +FEL
Sbjct: 626 EL----AAQNLFEL 635
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 96/242 (39%), Gaps = 43/242 (17%)
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
A + ++F N+ IT R G I+ A F+ +P + +SW +++ A + K
Sbjct: 45 SATRQKSSKFLVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINK 104
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A E+F ++ P+ ++ +++A +VD+ F M Q S Y ++
Sbjct: 105 AREVFNKIP----DPNVASYNAMITAYHRRNMVDEAFELFSSMP-----QRNSVSYATMI 155
Query: 480 DLLGRFGLIDEAMNLLNE-----------------------IRA-DGIEVSPTV-WGALL 514
G+ D A L E +R DG+ V W +++
Sbjct: 156 TGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMI 215
Query: 515 -GACRIHNNIKVGEIAGERVM--ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
G CR VG+I R + ++ N + ++ + Y+ +D +F M+ G
Sbjct: 216 SGLCR------VGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREG 269
Query: 572 VK 573
V+
Sbjct: 270 VE 271
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/557 (34%), Positives = 319/557 (57%), Gaps = 4/557 (0%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-HGMPLKDV 114
N +A L + V A+ +FD RDVV+W ++++ Y C G++ +A +F ++V
Sbjct: 39 NRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDRPDARRNV 98
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
V+W ++ R+D AE+ F M R+V SW M+ GR+ +A LF+ MP +
Sbjct: 99 VTWTALLSGYARAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVR 158
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
D +WN+++A + +G + A LF +M +R++ +W ++ G+ S ++ A + F MP
Sbjct: 159 DAGSWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMP 218
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFEL 294
E +WN++IS RN ++ EAH K P +IASW +I G+ + + A ++F+
Sbjct: 219 ERNVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLERAQELFDK 278
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
M R+V W M+ G ++ E L+ F M G P+ TF + CS+L L G
Sbjct: 279 MPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEG 338
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
+Q+H K T + + ++ +YA+CG I A F+ D+ISWN +I A+H
Sbjct: 339 QQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHH 398
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
G +A+ L+E+M+ +KP+D+T+VG+LSACS++GLVD+G F+ M + R H
Sbjct: 399 GVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEH 458
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM 534
YTC++DL R G + +A L++ ++ +E S TVW ALLG C H N +G++A ++
Sbjct: 459 YTCLIDLCSRAGRLGDAKRLIHFLK---VEPSSTVWNALLGGCNSHGNESIGDLAARNLL 515
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
E EPNN+G Y +L +Y S G+ ++A +I ++M + G+KK+PGCSWI++ + HVF+S D
Sbjct: 516 EAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVANKVHVFVSRD 575
Query: 595 SSHPKFHRLRYLLNLLH 611
SH + + LL +H
Sbjct: 576 KSHSESDLINSLLQDIH 592
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 229/458 (50%), Gaps = 52/458 (11%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-PERDMFTYNTVIAGLM 63
R+ +A+ LFD+ P RD V+W ++ Y G L +A LF++ R++ T+ +++G
Sbjct: 50 RVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDRPDARRNVVTWTALLSGYA 109
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
++ V A+ +F M R+VV+WN+M+ Y +G + +A +F+GMP++D SWN+++ A
Sbjct: 110 RAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNILLAA 169
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD-------------- 169
LV +D A F M R+V +WT MV G+ R G + EAR LFD
Sbjct: 170 LVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERNVVSWNAMI 229
Query: 170 -----------------KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
KMP +D+ +WN+MI G++ N + A++LF KM R++ +W
Sbjct: 230 SGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTT 289
Query: 213 LINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVLIRNGLV--KEAHSYLEKY 264
++NG + S + + A+ F M P ++ + GL ++ H + K
Sbjct: 290 MMNGYLQSIQSETALQLFNGMLIDGIRPNQV-TFLGAVDACSNLAGLSEGQQVHQMICKT 348
Query: 265 PYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
P+ + ++ Y + GE+ A KVF L +DV WN MI + +G E + +
Sbjct: 349 PFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLY 408
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK----IARNQFTTVSNAMITM 379
+M+E+G P++ T+ +L+ CS +D G +I +K R++ T +I +
Sbjct: 409 EKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTC---LIDL 465
Query: 380 YARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHG 415
+R G + A L+ F V + WN+++ G HG
Sbjct: 466 CSRAGRLGDAKRLIHFLKVEPSSTV-WNALLGGCNSHG 502
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 175/390 (44%), Gaps = 75/390 (19%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ I +A+ LFD+MP+R+ + W M+ G ++G ++ A LF+ MPER++ ++N +I+
Sbjct: 171 VRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERNVVSWNAMIS 230
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ + A ++F M RD+ +WN MI+G++ N ++ A +F MP ++VV+W +
Sbjct: 231 GYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTM 290
Query: 121 IGALVNCQRMDLAESYFKEM-------------GARDVAS-------------------- 147
+ + + + A F M GA D S
Sbjct: 291 MNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPF 350
Query: 148 ------WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+ ++N + G I+ ARK+F+ KDV +WN MIA Y +G A L++K
Sbjct: 351 QFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEK 410
Query: 202 MHD-----RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
M + D+T + L++ +S +D + F+ M V R+ V++
Sbjct: 411 MQENGYKPNDVT-YVGLLSACSHSGLVDEGLRIFEYM-------------VKDRSIAVRD 456
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDL 315
H +T +I G +G A ++ + TVWN ++ G N
Sbjct: 457 EH-------------YTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGC--NSH 501
Query: 316 GEEGLKFFVQMKESGPSPDNA-TFTSVLTI 344
G E + P+NA T+T + I
Sbjct: 502 GNESIGDLAARNLLEAEPNNAGTYTLLCNI 531
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 197/476 (41%), Gaps = 88/476 (18%)
Query: 167 LFDKMPAKDV----QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+D A DV Q N +A G V A LF + DRD+ SW L+
Sbjct: 22 FYDSAAAVDVSNHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGM 81
Query: 223 IDAAISYFKQMPETCEK--TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
+ A + F + P+ TW +++S R G V EA + + P N+ SW ++ Y
Sbjct: 82 LHDARALFDR-PDARRNVVTWTALLSGYARAGRVDEAEALFGRMPERNVVSWNTMLEAYT 140
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
G VG A +F M RD WN+++ L + ++ K F +M P + +T+
Sbjct: 141 SSGRVGDACTLFNGMPVRDAGSWNILLAALVRSGNIDKARKLFDRM----PERNVMAWTT 196
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIH 399
++ + +++ A+A+ + VS NAMI+ YAR I A F +P
Sbjct: 197 MVAGIARSGSVN-----EARALFDGMPERNVVSWNAMISGYARNHMIDEAHDLFMKMPTR 251
Query: 400 DIISWNSIICGL--------------------------AYHGY-----AEKALELFERMR 428
DI SWN +I G +GY +E AL+LF M
Sbjct: 252 DIASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGML 311
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGR----------YYFD-----CMKNKY------F 467
+ +P+ +TF+G + ACS + +G+ + FD + N Y
Sbjct: 312 IDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEII 371
Query: 468 LQPRSAHYTCVVDLLGRFGLID---------EAMNLLNEIRADGIEVSPTVWGALLGACR 518
L + + + D++ G+I EA++L +++ +G + + + LL AC
Sbjct: 372 LARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACS 431
Query: 519 IHNNIKVGEIAGERVMELEPNNSGV------YLILTEMYLSCGRREDAKRIFAQMK 568
H+ + V E G R+ E + + Y L ++ GR DAKR+ +K
Sbjct: 432 -HSGL-VDE--GLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLK 483
>gi|116310106|emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group]
gi|222628896|gb|EEE61028.1| hypothetical protein OsJ_14863 [Oryza sativa Japonica Group]
Length = 655
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 326/598 (54%), Gaps = 38/598 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+RN + EA+ +FD MP R++V+W ++ GY + G + A LFN++P+R++ ++N +++
Sbjct: 76 IRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVS 135
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ V+ A+E+FD M RD V+W +MISGY+ + EA +F MP N +
Sbjct: 136 GYARNGMVKRARELFDMMPWRDDVSWLTMISGYIKRKHVREARELFDSMPSPPTSVCNAL 195
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ V M AE F +M R+ SW +M+ G R G + A++LFD+MP KDV +
Sbjct: 196 LSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRT 255
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
++ GYL NG V A +F+ M RD +W +++G V + R+D A+ F +MP+ + +
Sbjct: 256 AIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQIS 315
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WN+I+ ++ G + A+++ + P + SW +I GY + G
Sbjct: 316 WNAILQGYVQQGDMDSANAWFRRAPNKDAISWNTLISGYKDEG----------------- 358
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
L +M G PD AT + V++IC+ L +L G+ +H
Sbjct: 359 ------------------ALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCGKMVHLW 400
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
AIK V +++I+MY++CG I A F + D ++WN++I AYHG A++A
Sbjct: 401 AIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEA 460
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L++F+ M F+PD TF+ +LSAC++ G + +G Y+F M+ + L PRS HY+C+VD
Sbjct: 461 LKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVD 520
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR G I +A + I +D T W L C H I++GEI V++ P++
Sbjct: 521 LLGRSGFIHQAYDFTRRIPSDH---RTTAWETLFSVCNSHGEIQLGEIIARNVLKARPSD 577
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
G+Y +L+ +Y + A + MKE G+KKE GCSWI++ F S DS+HP
Sbjct: 578 GGMYTLLSNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVVTFSSNDSNHP 635
>gi|68611229|emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group]
Length = 729
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 326/598 (54%), Gaps = 38/598 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+RN + EA+ +FD MP R++V+W ++ GY + G + A LFN++P+R++ ++N +++
Sbjct: 76 IRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVS 135
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ V+ A+E+FD M RD V+W +MISGY+ + EA +F MP N +
Sbjct: 136 GYARNGMVKRARELFDMMPWRDDVSWLTMISGYIKRKHVREARELFDSMPSPPTSVCNAL 195
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ V M AE F +M R+ SW +M+ G R G + A++LFD+MP KDV +
Sbjct: 196 LSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRT 255
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
++ GYL NG V A +F+ M RD +W +++G V + R+D A+ F +MP+ + +
Sbjct: 256 AIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQIS 315
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WN+I+ ++ G + A+++ + P + SW +I GY + G
Sbjct: 316 WNAILQGYVQQGDMDSANAWFRRAPNKDAISWNTLISGYKDEG----------------- 358
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
L +M G PD AT + V++IC+ L +L G+ +H
Sbjct: 359 ------------------ALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCGKMVHLW 400
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
AIK V +++I+MY++CG I A F + D ++WN++I AYHG A++A
Sbjct: 401 AIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEA 460
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L++F+ M F+PD TF+ +LSAC++ G + +G Y+F M+ + L PRS HY+C+VD
Sbjct: 461 LKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVD 520
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR G I +A + I +D T W L C H I++GEI V++ P++
Sbjct: 521 LLGRSGFIHQAYDFTRRIPSDH---RTTAWETLFSVCNSHGEIQLGEIIARNVLKARPSD 577
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
G+Y +L+ +Y + A + MKE G+KKE GCSWI++ F S DS+HP
Sbjct: 578 GGMYTLLSNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVVTFSSNDSNHP 635
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/614 (36%), Positives = 334/614 (54%), Gaps = 52/614 (8%)
Query: 27 MIRGYFKNGFLDNAMCLFNQMPERDMF----TYNTVIAGLMQSDNVQGAKEVFDGM---- 78
+++ K G L A+ + M E ++ TY++++ G + + ++ AK + M
Sbjct: 35 LVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQ 94
Query: 79 -EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF 137
E +D+ N ++S YV G + EA RVF MP+K+VVSW +I A + A +F
Sbjct: 95 FECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFF 154
Query: 138 KEMGARDVA----------------------------------SWTIMVNGLV----REG 159
EM +DV S + NGLV + G
Sbjct: 155 YEM--QDVGIQPNHFTFASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRG 212
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
I AR+LFDKMP +DV +WN MIAGY+ NG + A LFQ++ RD+ +W ++ G
Sbjct: 213 CIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQ 272
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
++ A+ F++MPE +WN++I+ ++NG VKEA + P N+ SW VI G+
Sbjct: 273 CGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGF 332
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G+V A+K+F+ M +V WN MI G +N E LK F QM+ P+ TF
Sbjct: 333 AQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFA 392
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
VL C+ L L+ G + H I+ V N ++ MYA+CG+I+ A F +
Sbjct: 393 IVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQ 452
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
D S +++I G A +G ++++LELFE+M+ T KPD +TFVGVLSAC +AGLVD+GR YF
Sbjct: 453 DSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYF 512
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
D M Y + P HY C++DLLGR G DEA +L+N++ I+ +WG+LL ACR
Sbjct: 513 DIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMP---IKPDADMWGSLLSACRT 569
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
HNNI +GE + ++ L P N Y++L+ +Y + GR +D + +MK+ VKK+ GCS
Sbjct: 570 HNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCS 629
Query: 580 WIQINDGGHVFLSG 593
WI I H FL G
Sbjct: 630 WIVIKKQVHAFLVG 643
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 163/313 (52%), Gaps = 48/313 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N I++A LF ++P+RD +TWN M+ GY + G ++NA+ LF +MPE+++ ++NT+IA
Sbjct: 240 VQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIA 299
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +Q+ +V+ A ++F M R+V++WN++ISG+ NG ++EAL++F MP +VVSWN +
Sbjct: 300 GYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAM 359
Query: 121 IGALVNCQRMDLAESYFKEMGARDV--------------ASWTIMVNG------LVRE-- 158
I + + A F +M D+ A+ ++ G ++R
Sbjct: 360 IAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGF 419
Query: 159 -----------------GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
G I +ARK+FD+M +D + + MI GY NGC + +LF++
Sbjct: 420 QSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQ 479
Query: 202 MH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNG 252
M D ++ +++ ++ +D YF M T + +I +L R G
Sbjct: 480 MQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAG 539
Query: 253 LVKEAHSYLEKYP 265
EA+ + K P
Sbjct: 540 CFDEANDLINKMP 552
>gi|125548358|gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indica Group]
Length = 655
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 326/598 (54%), Gaps = 38/598 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+RN + EA+ +FD MP R++V+W ++ GY + G + A LFN++P+R++ ++N +++
Sbjct: 76 IRNRMLAEARKVFDAMPVRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVS 135
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ V+ A+E+FD M RD V+W +MISGY+ + EA +F MP N +
Sbjct: 136 GYARNGMVKRARELFDMMPWRDDVSWLTMISGYIKRKHVREARELFDSMPSPPTSVCNAL 195
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ V M AE F +M R+ SW +M+ G R G + A++LFD+MP KDV +
Sbjct: 196 LSGYVELGYMRAAEVLFGQMQTRNPVSWNVMITGYARAGSMGIAQRLFDEMPEKDVLSRT 255
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
++ GYL NG V A +F+ M RD +W +++G V + R+D A+ F +MP+ + +
Sbjct: 256 AIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNTMMDGFVRNDRLDDALKLFSEMPDRDQIS 315
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
W++I+ ++ G + A+ + + P + SW +I GY + G
Sbjct: 316 WHAILQGYVQQGDMDSANVWFPRAPNKDAISWNTLISGYKDEG----------------- 358
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
L +M G PD AT + V++IC+ L +L G+ +H
Sbjct: 359 ------------------ALSLLSEMIRGGLKPDQATLSVVISICASLVSLGCGKMVHLW 400
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
AIK V +++I+MY++CG I A F + D ++WN++I AYHG A++A
Sbjct: 401 AIKTGFEHDALVMSSLISMYSKCGLISEASQVFELILQRDTVTWNAMIATYAYHGLADEA 460
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L++F+ M F+PD TF+ +LSAC++ G + +G Y+F M+ + L PRS HY+C+VD
Sbjct: 461 LKVFDMMTKAGFRPDHATFLSILSACAHKGYLYEGCYHFRSMQEDWNLVPRSDHYSCMVD 520
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR G I +A + I +D T W L AC H I++GEI V++ P++
Sbjct: 521 LLGRSGFIHQAYDFTRRIPSDH---RTTAWETLFSACNSHGEIQLGEIIARNVLKARPSD 577
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
G+Y +L+ +Y + A + MKE G+KKE GCSWI++ F S DS+HP
Sbjct: 578 GGMYTLLSNIYAAKEMWSSAASVRGFMKERGLKKETGCSWIELKGEVVTFSSNDSNHP 635
>gi|147861249|emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
Length = 932
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/543 (37%), Positives = 317/543 (58%), Gaps = 11/543 (2%)
Query: 47 MPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF 106
MP D +Y +I ++++ ++ A+++F M R +V ++MI GY GL+D A +VF
Sbjct: 1 MPHHDNVSYTAMITAYLKNNELRKAEKLFQTMPDRTIVAESAMIDGYAKAGLMDSAQKVF 60
Query: 107 HGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARK 166
M +V SW +I ++ A F +M A++V SWT MV G R G I +AR
Sbjct: 61 DAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARNGLIDQARS 120
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+F++MP K+ +W M+ Y+DNG A LF +M R+L SW +I+G ++ +R++ A
Sbjct: 121 VFNQMPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCLDGKRVNEA 180
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVG 286
F MP +W ++S L RNG K A Y ++ P +IA+W +I Y + +
Sbjct: 181 FKLFHLMPLRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIV 240
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A ++F LMT R++ WN MI G + E +K + M S P+ T T +LT C
Sbjct: 241 EASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSCW 300
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
+ L Q HA AI + T++SNA+ITMY+R G+I S+ + F S+ D++SW +
Sbjct: 301 GMLEL---MQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKDVVSWTA 357
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
++ YHG+ + AL +F M + KPD+ITFVGVLSACS+AGLV +G+ FD M Y
Sbjct: 358 MLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAY 417
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNL---LNEIRADGIEVSPTVWGALLGACRIHNNI 523
L+PR+ HY+C+VD+LGR G + EAM++ + E DG V GALLGACR+H N+
Sbjct: 418 GLEPRAEHYSCLVDILGRAGQVHEAMDVVWKMPECERDG-----AVLGALLGACRLHGNV 472
Query: 524 KVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQI 583
++ + G++++EL+PN+SG Y++L ++ + G ++ + +MK+ V+K PG S I+
Sbjct: 473 EMADYIGQKLIELQPNSSGGYVLLANVFAARGNWDEFAEVRKKMKDRNVRKVPGFSQIEF 532
Query: 584 NDG 586
G
Sbjct: 533 QQG 535
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 211/402 (52%), Gaps = 28/402 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ AQ +FD M + +W +I GYF++G + A LF+QMP +++ ++ T++ G ++
Sbjct: 53 MDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARN 112
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
+ A+ VF+ M ++ ++W +M+ YV NG DEAL++FH MP +++ SWN +I +
Sbjct: 113 GLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCL 172
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
+ +R++ A F M R+ SWTIMV+GL R G AR+ FD+MP KD+ AWN MI
Sbjct: 173 DGKRVNEAFKLFHLMPLRNAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITA 232
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
Y+D + A +LF M +R++ +W +I+G R A+ + M +C + + +
Sbjct: 233 YVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTM 292
Query: 246 SVLIRN--GLVK--EAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDV 300
++++ + G+++ +AH+ S +N ++ Y +G++ S+ FE + +DV
Sbjct: 293 TIILTSCWGMLELMQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKDV 352
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W M+ + G+ L F M +SG PD TF VL+ CS HA
Sbjct: 353 VSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLSACS-----------HAG 401
Query: 361 AIKIARNQFTTVSNA------------MITMYARCGNIQSAL 390
+K + F ++S A ++ + R G + A+
Sbjct: 402 LVKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVHEAM 443
>gi|356528072|ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 647
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/602 (35%), Positives = 352/602 (58%), Gaps = 26/602 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ R+ EA+ LFD M RDTVTWN MI GY + A LF++MP RD+ ++N +++
Sbjct: 50 IRSGRLSEARALFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEMPRRDVVSWNLIVS 109
Query: 61 GLMQ---SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
G S V+ + +F+ M RD V+WN++ISGY NG +D+AL++F+ MP ++ VS
Sbjct: 110 GYFSCRGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPERNAVSS 169
Query: 118 N-LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD- 175
N L+ G L+N +D A +F+ M S + +++GLVR G + A + + D
Sbjct: 170 NALITGFLLNGD-VDSAVDFFRTMPEHYSTSLSALISGLVRNGELDMAAGILCECGNGDD 228
Query: 176 --VQAWNLMIAGYLDNGCVGVAEDLF-------------QKMHDRDLTSWKQLINGLVNS 220
V A+N +IAGY G V A LF Q+ R++ SW ++ V +
Sbjct: 229 DLVHAYNTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKA 288
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
I +A F +M E +WN++IS ++ ++EA + P ++ SW ++ G+
Sbjct: 289 GDIVSARELFDRMVEQDTCSWNTMISGYVQISNMEEASKLFREMPIPDVLSWNLIVSGFA 348
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G++ A FE M +++ WN +I G +N+ + ++ F +M+ G PD T +S
Sbjct: 349 QKGDLNLAKDFFERMPLKNLISWNSIIAGYEKNEDYKGAIQLFSRMQFEGERPDRHTLSS 408
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH- 399
V+++C+ L L LG+QIH KI + ++N++ITMY+RCG I A F+ + ++
Sbjct: 409 VMSVCTGLVNLYLGKQIHQLVTKIVIPD-SPINNSLITMYSRCGAIVDACTVFNEIKLYK 467
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
D+I+WN++I G A HG A +ALELF+ M+ P ITF+ V++AC++AGLV++GR F
Sbjct: 468 DVITWNAMIGGYASHGLAAEALELFKLMKRLKIHPTYITFISVMNACAHAGLVEEGRRQF 527
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
M N Y ++ R H+ +VD+LGR G + EAM+L+N + + VWGALL ACR+
Sbjct: 528 KSMINDYGIERRVEHFASLVDILGRQGQLQEAMDLINTM---PFKPDKAVWGALLSACRV 584
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
HNN+++ +A + ++ LEP +S Y++L +Y + G+ +DA+ + M+E VKK+ G S
Sbjct: 585 HNNVELALVAADALIRLEPESSAPYVLLYNIYANLGQWDDAESVRVLMEEKNVKKQAGYS 644
Query: 580 WI 581
W+
Sbjct: 645 WV 646
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 231/486 (47%), Gaps = 67/486 (13%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
N I+ L++S + A+ +FD M+ RD VTWNSMI+GYV I A ++F MP +DVV
Sbjct: 43 NKKISNLIRSGRLSEARALFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEMPRRDVV 102
Query: 116 SWNLVIGALVNCQRMDLAES---YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
SWNL++ +C+ E F+ M RD SW +++G + GR+ +A KLF+ MP
Sbjct: 103 SWNLIVSGYFSCRGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMP 162
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
++ + N +I G+L NG V A D F+ M + TS LI+GLV + +D A +
Sbjct: 163 ERNAVSSNALITGFLLNGDVDSAVDFFRTMPEHYSTSLSALISGLVRNGELDMAAGILCE 222
Query: 233 M---PETCEKTWNSIISVLIRNGLVKEAHSYLEKYP-------------YSNIASWTNVI 276
+ +N++I+ + G V+EA + P N+ SW +++
Sbjct: 223 CGNGDDDLVHAYNTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMM 282
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
+ Y + G++ SA ++F+ M +D WN MI G + EE K F +M P PD
Sbjct: 283 MCYVKAGDIVSARELFDRMVEQDTCSWNTMISGYVQISNMEEASKLFREM----PIPDVL 338
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
++ N +++ +A+ G++ A F +
Sbjct: 339 SW-----------------------------------NLIVSGFAQKGDLNLAKDFFERM 363
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD--Q 454
P+ ++ISWNSII G + + A++LF RM+ +PD T V+S C+ GLV+
Sbjct: 364 PLKNLISWNSIIAGYEKNEDYKGAIQLFSRMQFEGERPDRHTLSSVMSVCT--GLVNLYL 421
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
G+ + + P S ++ + R G I +A + NEI+ + W A++
Sbjct: 422 GKQIHQLVTK--IVIPDSPINNSLITMYSRCGAIVDACTVFNEIK---LYKDVITWNAMI 476
Query: 515 GACRIH 520
G H
Sbjct: 477 GGYASH 482
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
SN I+ R G + A F S+ D ++WNS+I G + +A +LF+ M D
Sbjct: 42 SNKKISNLIRSGRLSEARALFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEMPRRDV 101
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
++ G S C + V++GR F+ M Q + V+ + G +D+A+
Sbjct: 102 VSWNLIVSGYFS-CRGSRFVEEGRRLFELMP-----QRDCVSWNTVISGYAKNGRMDQAL 155
Query: 493 NLLNEI 498
L N +
Sbjct: 156 KLFNAM 161
>gi|222616932|gb|EEE53064.1| hypothetical protein OsJ_35805 [Oryza sativa Japonica Group]
Length = 841
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/597 (33%), Positives = 339/597 (56%), Gaps = 39/597 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-ERDMFTYNTVIA 60
++ R+++A+ LFD MP R+ +W +M+ Y + G L A L ++MP E+ YNT+I+
Sbjct: 85 QHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMIS 144
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ + A + M D+V+WNS++ G + N I +++ F MP KD+VSWNL+
Sbjct: 145 GYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLM 204
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ V +D+A ++F + + +V SW +VNG + GR+ EAR+LFD+MP ++V AWN
Sbjct: 205 LEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWN 264
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE--TCE 238
++++GY+ V A +LF +M +++ SW +++G V S ++ A +MP
Sbjct: 265 VLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGA 324
Query: 239 KT-----------------------------WNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
KT WN++IS ++ G++ EA ++ P ++
Sbjct: 325 KTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDM 384
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
SW +I G + G++ A +F M R+ WN +I G +N L E L+ F+ M+
Sbjct: 385 ISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRD 444
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
S D T+ L+ ++L TL +GRQ H+ ++ ++ NA+I+ YA+CG + A
Sbjct: 445 AKSADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEA 504
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F + + DI+SWN++I G A +G + + +F M +PD+IT V VLSACS+A
Sbjct: 505 RQVFDEMVVQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHA 564
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT- 508
GL+D+G ++F+ M Y L+P + HYTC+VDLLGR G + EA L+ G+++ P
Sbjct: 565 GLIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREAFELVQ-----GMQIQPNA 619
Query: 509 -VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
VWGALLGACR+H N ++ +A E++ ELEP + Y++L+ + + G+ +DA + +
Sbjct: 620 GVWGALLGACRVHKNHEIAWLAAEKLFELEPCKASNYVLLSNICVEAGKWDDADKCY 676
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 230/440 (52%), Gaps = 36/440 (8%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+F N + L +S + A+ +F+ M R+VV++N+M+S +G + EA R+F MP
Sbjct: 11 VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR 70
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
++ VSWN ++ A R++ A F M AR+ SWTIMV+ VR G + AR+L D+M
Sbjct: 71 RNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRM 130
Query: 172 PAKDVQA-WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
P + A +N MI+GY NG A L Q+M D+ SW ++ GL+ + I ++ +F
Sbjct: 131 PGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFF 190
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+MP+ +WN ++ +R G + A ++ + P N+ SW N++ GY + G +G A +
Sbjct: 191 DEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARE 250
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT------- 343
+F+ M R+V WNV++ G + E F++M P ++ ++T++++
Sbjct: 251 LFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEM----PEKNSISWTTMVSGFVRSGK 306
Query: 344 ------ICSDLPTLDLGRQ-------IHAQAIKIARNQFTTVS-------NAMITMYARC 383
+ S +P+ ++G + + + I AR F + N MI+ Y +C
Sbjct: 307 LQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQC 366
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G + A++ F +P D+ISWN++I G A G KA +F +M+ + + +++ ++
Sbjct: 367 GMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMK----RRNTVSWNSII 422
Query: 444 SACSYAGLVDQGRYYFDCMK 463
S GL + +F M+
Sbjct: 423 SGFVQNGLFVEALQHFMLMR 442
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 177/401 (44%), Gaps = 29/401 (7%)
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
K+ A V N + +G + A LF++M R++ S+ +++ L + R+ A
Sbjct: 5 KLTASAVFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRL 64
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
F +MP +WN+++ ++G V++A + P N SWT ++ Y GE+ A
Sbjct: 65 FDEMPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLAR 124
Query: 290 KVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
++ + M + +N MI G +N E+ + +M P+PD ++ SVL +
Sbjct: 125 ELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEM----PAPDIVSWNSVLG--GLI 178
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
++ R + Q ++ N M+ Y R G++ A FS +P ++ISW +++
Sbjct: 179 RNEEISRSV--QFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLV 236
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
G G +A ELF+RM + + + +LS V+ F M K
Sbjct: 237 NGYCQAGRMGEARELFDRMPERNV----VAWNVLLSGYVQFSQVEAAYNLFIEMPEK--- 289
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
S +T +V R G + EA ++L+++ +D + + +H +K I
Sbjct: 290 --NSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTAL---------MHGYLKSNLI 338
Query: 529 AGERVM--ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
R + + ++ + + Y+ CG ++A +F QM
Sbjct: 339 DDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQM 379
>gi|255575746|ref|XP_002528772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531775|gb|EEF33594.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/638 (34%), Positives = 346/638 (54%), Gaps = 48/638 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R+ + EA+ LFD MP+R+ V++N ++ G + G L AM LF +MPER++ ++ +++ G
Sbjct: 22 RSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMKLFEEMPERNVVSWTSMLCG 81
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
L + + AK +F+ M R+VV+WN+MI G + NG ++ A VF P+K+ SWN +I
Sbjct: 82 LADAGKICEAKSLFEEMPDRNVVSWNAMIVGLIRNGDLEAARMVFDESPVKNAASWNGMI 141
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
RM+ A + F EM R+V +WT MV+G R G + E LF MP +++ +W
Sbjct: 142 AGYAENGRMEEARALFDEMEDRNVITWTSMVSGYCRAGEVEEGYHLFRTMPKRNIVSWTA 201
Query: 182 MIAGYLDNG-------------------------------CVGVA-EDLFQKMHDRDLTS 209
MI G+ NG C G+ L +++H R +T
Sbjct: 202 MIGGFTWNGFYEDALLLFLEMKRGADITPNIETFISLAYACAGLGFHRLGKQLHARLITE 261
Query: 210 W-------KQLINGLVNSRR----IDAAISYF-KQMPETCEKTWNSIISVLIRNGLVKEA 257
+L GL+ +D A F K ++ N +I+ IR GL+ +A
Sbjct: 262 GLDNDDYDGRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQSCNYMINGYIRIGLLDKA 321
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ + P + +WT++I GY +G V A +F M +D W MI G N+L
Sbjct: 322 QNLFDTMPVRDKITWTSMIDGYLVIGNVSEACSLFLYMPEKDAVAWTTMISGHVRNELFA 381
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E F +M G P ++T+ + + +LD GRQ+HA K + + N++I
Sbjct: 382 EATYLFSEMLTQGVRPLSSTYAILFGAAGAVASLDQGRQLHAMLTKTLSDNDLILENSLI 441
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
+MYA+CG I++A FS + HD+ISWNS+I G ++HG A +ALE+FE M + P+ +
Sbjct: 442 SMYAKCGEIRNAYRIFSQMISHDLISWNSMIMGFSHHGLANEALEVFEAMVDSGTHPNSV 501
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
TF+GVLSACS+AGL++QG F+ M + + +QP HY C+V+LLGR G + EA L
Sbjct: 502 TFLGVLSACSHAGLINQGWEIFNAMSDVFAVQPGLEHYICMVNLLGRAGKLKEAEEL--- 558
Query: 498 IRADGIEVSPTVWGALLGACRI-HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
I +E + +WGALLG C N + + A R++EL+P N+ +++L +Y + G+
Sbjct: 559 ILGLPLERNHAIWGALLGVCSFSEKNADIAKRAATRILELDPLNAPAHVLLCNIYAASGQ 618
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
+ ++ +M GVKK PGCSWI +N HVFLSGD
Sbjct: 619 HIEEHKLRKEMGLKGVKKVPGCSWIVLNGRVHVFLSGD 656
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 223/464 (48%), Gaps = 15/464 (3%)
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
PL +V W ++ +D A + F M R+ S+ +++GL++ GR+ EA KLF+
Sbjct: 6 PLSRIVYWTSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMKLFE 65
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+MP ++V +W M+ G D G + A+ LF++M DR++ SW +I GL+ + ++AA
Sbjct: 66 EMPERNVVSWTSMLCGLADAGKICEAKSLFEEMPDRNVVSWNAMIVGLIRNGDLEAARMV 125
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
F + P +WN +I+ NG ++EA + ++ N+ +WT+++ GY GEV
Sbjct: 126 FDESPVKNAASWNGMIAGYAENGRMEEARALFDEMEDRNVITWTSMVSGYCRAGEVEEGY 185
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP-SPDNATFTSVLTICSDL 348
+F M R++ W MI G N E+ L F++MK +P+ TF S+ C+ L
Sbjct: 186 HLFRTMPKRNIVSWTAMIGGFTWNGFYEDALLLFLEMKRGADITPNIETFISLAYACAGL 245
Query: 349 PTLDLGRQIHAQAIKIARNQFT---TVSNAMITMYARCGNIQSALLEFSSVPIHDII-SW 404
LG+Q+HA+ I + +S +I MY+ G + A F+ + ++ S
Sbjct: 246 GFHRLGKQLHARLITEGLDNDDYDGRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQSC 305
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
N +I G G +KA LF+ M + D IT+ ++ G V + C
Sbjct: 306 NYMINGYIRIGLLDKAQNLFDTMPVR----DKITWTSMIDGYLVIGNVSEA-----CSLF 356
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
Y + + +T ++ R L EA L +E+ G+ + + L GA ++
Sbjct: 357 LYMPEKDAVAWTTMISGHVRNELFAEATYLFSEMLTQGVRPLSSTYAILFGAAGAVASLD 416
Query: 525 VG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
G ++ L N+ + L MY CG +A RIF+QM
Sbjct: 417 QGRQLHAMLTKTLSDNDLILENSLISMYAKCGEIRNAYRIFSQM 460
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 225/492 (45%), Gaps = 63/492 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+RN ++ A+ +FD+ P ++ +WN MI GY +NG ++ A LF++M +R++ T+ ++++
Sbjct: 114 IRNGDLEAARMVFDESPVKNAASWNGMIAGYAENGRMEEARALFDEMEDRNVITWTSMVS 173
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-- 118
G ++ V+ +F M R++V+W +MI G+ NG ++AL +F M ++ N
Sbjct: 174 GYCRAGEVEEGYHLFRTMPKRNIVSWTAMIGGFTWNGFYEDALLLFLEMKRGADITPNIE 233
Query: 119 ------------------------LVIGALVN------------CQR-----MDLAESYF 137
L+ L N C MD A F
Sbjct: 234 TFISLAYACAGLGFHRLGKQLHARLITEGLDNDDYDGRLSKGLICMYSSIGFMDYAHYIF 293
Query: 138 -KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
K V S M+NG +R G + +A+ LFD MP +D W MI GYL G V A
Sbjct: 294 NKNSNYYVVQSCNYMINGYIRIGLLDKAQNLFDTMPVRDKITWTSMIDGYLVIGNVSEAC 353
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI-RNGLV- 254
LF M ++D +W +I+G V + A F +M + +S ++L G V
Sbjct: 354 SLFLYMPEKDAVAWTTMISGHVRNELFAEATYLFSEMLTQGVRPLSSTYAILFGAAGAVA 413
Query: 255 -----KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
++ H+ L K N N ++ Y + GE+ +A ++F M + D+ WN MI
Sbjct: 414 SLDQGRQLHAMLTKTLSDNDLILENSLISMYAKCGEIRNAYRIFSQMISHDLISWNSMIM 473
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI-HAQAIKIARN 367
G + L E L+ F M +SG P++ TF VL+ CS ++ G +I +A + A
Sbjct: 474 GFSHHGLANEALEVFEAMVDSGTHPNSVTFLGVLSACSHAGLINQGWEIFNAMSDVFAVQ 533
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPI---HDIISWNSIICGLAYHGYAEKALELF 424
M+ + R G ++ A +P+ H I W ++ L ++EK ++
Sbjct: 534 PGLEHYICMVNLLGRAGKLKEAEELILGLPLERNHAI--WGAL---LGVCSFSEKNADIA 588
Query: 425 ER--MRLTDFKP 434
+R R+ + P
Sbjct: 589 KRAATRILELDP 600
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 155/368 (42%), Gaps = 82/368 (22%)
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+ P + W +++ Y +G V A LF M +R+ S+ L++GL+ R+ A+
Sbjct: 4 RSPLSRIVYWTSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMKL 63
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
F++MPE +W S++ L G + EA S E+ P N+ SW +IVG G++ +A
Sbjct: 64 FEEMPERNVVSWTSMLCGLADAGKICEAKSLFEEMPDRNVVSWNAMIVGLIRNGDLEAAR 123
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
VF+ ++ WN MI G EN EE F +M++
Sbjct: 124 MVFDESPVKNAASWNGMIAGYAENGRMEEARALFDEMED--------------------- 162
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
RN T S M++ Y R G ++ F ++P +I+SW ++I
Sbjct: 163 ----------------RNVITWTS--MVSGYCRAGEVEEGYHLFRTMPKRNIVSWTAMIG 204
Query: 410 GLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSAC---------------------- 446
G ++G+ E AL LF M R D P+ TF+ + AC
Sbjct: 205 GFTWNGFYEDALLLFLEMKRGADITPNIETFISLAYACAGLGFHRLGKQLHARLITEGLD 264
Query: 447 ----------------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
S G +D Y F+ N Y +Q S +Y +++ R GL+D+
Sbjct: 265 NDDYDGRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQ--SCNY--MINGYIRIGLLDK 320
Query: 491 AMNLLNEI 498
A NL + +
Sbjct: 321 AQNLFDTM 328
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/624 (33%), Positives = 349/624 (55%), Gaps = 47/624 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
RN ++EA+++F +MP ++ ++W M+ Y++NG + A +F +MP+R +YN +I
Sbjct: 43 RNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTASYNAMITA 102
Query: 62 LMQSDN--VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL--KDVVSW 117
+S+ + A ++F M R+ +++ +MI+G G++D A ++ P+ +D V
Sbjct: 103 YTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAEELYLETPVEWRDPVCS 162
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
N +I + R++ A F+ MG RDV SW+ MV+G ++G+I AR+LF++MP ++V
Sbjct: 163 NALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVV 222
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDR------------------DLTSWKQLI--NGL 217
W MI G++ GC V LF +M + +K+ I +GL
Sbjct: 223 TWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGL 282
Query: 218 VNSRRID--------------------AAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
V+ + A F M +WN++I+ ++N V+E
Sbjct: 283 VSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEG 342
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ EK ++ SWT +I G+ G++G +I++F +M +D W +I G N E
Sbjct: 343 YVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYE 402
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E + +F++M P+ T +SVL+ + L TL+ G QIH +K+ ++ N+++
Sbjct: 403 EAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLV 462
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
+MY +CGN+ F+S+ +I+S+NS+I G A +G+ E+ALELF +M KP++I
Sbjct: 463 SMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEI 522
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
TF+GVLSAC++ GL++QG YF MK+ Y ++P HY C+VDLLGR G +D+A++L
Sbjct: 523 TFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDL--- 579
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
IR+ E VWGALLGA RIH + V ++A +++ +LEP+N+ Y +L+ +Y S GR
Sbjct: 580 IRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAVLSFLYSSAGRN 639
Query: 558 EDAKRIFAQMKENGVKKEPGCSWI 581
D++++ GVKK G SWI
Sbjct: 640 RDSEQVRMAQGLKGVKKSAGYSWI 663
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 182/378 (48%), Gaps = 31/378 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ R++EA +F+ M +RD ++W+ M+ GY K G + +A LF +MPER++ T+ +I
Sbjct: 170 LKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMID 229
Query: 61 GLMQSDNVQGAKEVFDGMEVR---------DVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
G M+ G EV G+ +R + T M G E +++ HG+
Sbjct: 230 GHMK----MGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQM-HGLVS 284
Query: 112 K-----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARK 166
+ DV N +I + A F M +DV SW ++ G V+ + E
Sbjct: 285 RMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYV 344
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
LF+K KDV +W MI G+ + G +G + +LF+ M +D +W +I+G V + + A
Sbjct: 345 LFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEA 404
Query: 227 ISYFKQMPETCEK----TWNSIIS-----VLIRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
I +F +M + T +S++S + GL + H+ + K S N +V
Sbjct: 405 IYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGL--QIHTLVVKMGMEFDLSIQNSLV 462
Query: 278 G-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G V ++F + + ++ +N MI G +N GEE L+ F +M G P+
Sbjct: 463 SMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEI 522
Query: 337 TFTSVLTICSDLPTLDLG 354
TF VL+ C+ + L+ G
Sbjct: 523 TFLGVLSACTHVGLLEQG 540
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 52/222 (23%)
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+F ++ IT + R G+++ A FS +P + ISW +++ +G+ KA ++FE+
Sbjct: 28 TKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEK 87
Query: 427 MRLTDFKPDDITFVGVLSACSYAG--LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
M + ++ +++A + + ++ + F M+ + S Y ++ L R
Sbjct: 88 MP----QRTTASYNAMITAYTRSNPMMIGEASKLFAEMRER-----NSISYAAMITGLAR 138
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G++D A L E +P W +P S
Sbjct: 139 AGMVDNAEELYLE--------TPVEW-------------------------RDPVCSNA- 164
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
L YL GR E+A RIF M E V SW + DG
Sbjct: 165 --LISGYLKVGRLEEATRIFEGMGERDV-----ISWSSMVDG 199
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/624 (33%), Positives = 349/624 (55%), Gaps = 47/624 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
RN ++EA+++F +MP ++ ++W M+ Y++NG + A +F +MP+R +YN +I
Sbjct: 122 RNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTASYNAMITA 181
Query: 62 LMQSDN--VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL--KDVVSW 117
+S+ + A ++F M R+ +++ +MI+G G++D A ++ P+ +D V
Sbjct: 182 YTRSNPMMIGEASKLFAEMRERNSISYAAMITGLARAGMVDNAEELYLETPVEWRDPVCS 241
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
N +I + R++ A F+ MG RDV SW+ MV+G ++G+I AR+LF++MP ++V
Sbjct: 242 NALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVV 301
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDR------------------DLTSWKQLI--NGL 217
W MI G++ GC V LF +M + +K+ I +GL
Sbjct: 302 TWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGL 361
Query: 218 VNSRRID--------------------AAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
V+ + A F M +WN++I+ ++N V+E
Sbjct: 362 VSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEG 421
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ EK ++ SWT +I G+ G++G +I++F +M +D W +I G N E
Sbjct: 422 YVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYE 481
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E + +F++M P+ T +SVL+ + L TL+ G QIH +K+ ++ N+++
Sbjct: 482 EAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLV 541
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
+MY +CGN+ F+S+ +I+S+NS+I G A +G+ E+ALELF +M KP++I
Sbjct: 542 SMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEI 601
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
TF+GVLSAC++ GL++QG YF MK+ Y ++P HY C+VDLLGR G +D+A++L
Sbjct: 602 TFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDL--- 658
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
IR+ E VWGALLGA RIH + V ++A +++ +LEP+N+ Y +L+ +Y S GR
Sbjct: 659 IRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAVLSFLYSSAGRN 718
Query: 558 EDAKRIFAQMKENGVKKEPGCSWI 581
D++++ GVKK G SWI
Sbjct: 719 RDSEQVRMAQGLKGVKKSAGYSWI 742
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 182/378 (48%), Gaps = 31/378 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ R++EA +F+ M +RD ++W+ M+ GY K G + +A LF +MPER++ T+ +I
Sbjct: 249 LKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMID 308
Query: 61 GLMQSDNVQGAKEVFDGMEVR---------DVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
G M+ G EV G+ +R + T M G E +++ HG+
Sbjct: 309 GHMK----MGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQM-HGLVS 363
Query: 112 K-----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARK 166
+ DV N +I + A F M +DV SW ++ G V+ + E
Sbjct: 364 RMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYV 423
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
LF+K KDV +W MI G+ + G +G + +LF+ M +D +W +I+G V + + A
Sbjct: 424 LFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEA 483
Query: 227 ISYFKQMPETCEK----TWNSIIS-----VLIRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
I +F +M + T +S++S + GL + H+ + K S N +V
Sbjct: 484 IYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGL--QIHTLVVKMGMEFDLSIQNSLV 541
Query: 278 G-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G V ++F + + ++ +N MI G +N GEE L+ F +M G P+
Sbjct: 542 SMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEI 601
Query: 337 TFTSVLTICSDLPTLDLG 354
TF VL+ C+ + L+ G
Sbjct: 602 TFLGVLSACTHVGLLEQG 619
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 52/222 (23%)
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+F ++ IT + R G+++ A FS +P + ISW +++ +G+ KA ++FE+
Sbjct: 107 TKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEK 166
Query: 427 MRLTDFKPDDITFVGVLSACSYAG--LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
M + ++ +++A + + ++ + F M+ + S Y ++ L R
Sbjct: 167 MP----QRTTASYNAMITAYTRSNPMMIGEASKLFAEMRER-----NSISYAAMITGLAR 217
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G++D A L E +P W +P S
Sbjct: 218 AGMVDNAEELYLE--------TPVEW-------------------------RDPVCSNA- 243
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
L YL GR E+A RIF M E V SW + DG
Sbjct: 244 --LISGYLKVGRLEEATRIFEGMGERDV-----ISWSSMVDG 278
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/557 (35%), Positives = 317/557 (56%), Gaps = 3/557 (0%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-HGMPLKDV 114
N +I L + V A+++FDG RDVV+W +++S Y G++ +A +F ++V
Sbjct: 44 NRLIVDLAAAGRVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFDRSDARRNV 103
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
V+W ++ +D AE F+ M R+V SW M+ GR +A LFD+MP +
Sbjct: 104 VTWTALLSGYARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVR 163
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
D +WN+++A + +G V A +LF +M +RD+ +W +++G+ S +D A F MP
Sbjct: 164 DAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMP 223
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFEL 294
E +WN++IS RN + EA K P+ +IAS +I G+ + ++ A K+F+
Sbjct: 224 ERNVVSWNAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLFDE 283
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
M R+V W M+ G + E L F M SG P+ TF L CSDL TL G
Sbjct: 284 MPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEG 343
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
+Q+H K A T V +A++ +YA+CG + A F D+ISWN II A+H
Sbjct: 344 KQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHH 403
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
G +A+ L+E+M+ ++P+D+T+V +LSACS++GLVD+G F+ M N + R H
Sbjct: 404 GVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEH 463
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM 534
YTC++DL R G +D+A L++ ++ S +VW ALLG C H N +G +A ++
Sbjct: 464 YTCLIDLCSRAGRLDDAKRLIHYLKIK--PASGSVWSALLGGCNAHGNESIGNLAARNLI 521
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
+ EP+N+G Y +L+ +Y S G+ ++A I ++M G+KK+PGCSWI++ + HVF++ D
Sbjct: 522 QAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPGCSWIEVANKVHVFVARD 581
Query: 595 SSHPKFHRLRYLLNLLH 611
SH + + LL +H
Sbjct: 582 KSHSESDLIYGLLQNIH 598
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 239/492 (48%), Gaps = 63/492 (12%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-PERDMFTYNTVIAGLM 63
R+ +A+ LFD P+RD V+W ++ Y + G L +A LF++ R++ T+ +++G
Sbjct: 55 RVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFDRSDARRNVVTWTALLSGYA 114
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
++ V A+ +F M R+VV+WN+M+ Y G +A +F MP++D SWN+++
Sbjct: 115 RAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNILLAM 174
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
LV +D A F M RDV +WT MV+G+ R G + EAR LFD MP ++V +WN MI
Sbjct: 175 LVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMI 234
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS 243
+GY N + A DLF KM RD+ S +I G + ++ + A F +MPE TW +
Sbjct: 235 SGYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWTT 294
Query: 244 I-----------ISVLIRNGLV---------------------------KEAHSYLEKYP 265
+ +S+ + G++ K+ H + K
Sbjct: 295 MMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKTA 354
Query: 266 YSNIASWTNVIVG------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+ + VG Y + GEVG A K+F+L +D+ WN +I + +G E
Sbjct: 355 FQ-----VDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEA 409
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI-----HAQAIKIARNQFTTVSN 374
+ + +M+ +G P++ T+ +L+ CS +D G +I + ++I + +T
Sbjct: 410 IHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYT---- 465
Query: 375 AMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+I + +R G + A L+ + + W++++ G HG +++ L
Sbjct: 466 CLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHG--NESIGNLAARNLIQA 523
Query: 433 KPDDITFVGVLS 444
+PD+ +LS
Sbjct: 524 EPDNAGTYTLLS 535
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 158/330 (47%), Gaps = 54/330 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ + +A+ LF +MP+RD + W M+ G ++G +D A LF+ MPER++ ++N +I+
Sbjct: 176 VRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMIS 235
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ + A ++F M RD+ + N MI+G++ N + A ++F MP ++VV+W +
Sbjct: 236 GYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWTTM 295
Query: 121 IGALVNCQRMDLAESYFKEM-------------GARDVAS-------------------- 147
+ + ++ +L+ F+ M GA D S
Sbjct: 296 MNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAF 355
Query: 148 ------WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+ ++N + G + ARKLFD KD+ +WN +IA Y +G A L++K
Sbjct: 356 QVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEK 415
Query: 202 MH-----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPE-----TCEKTWNSIISVLIRN 251
M D+T + L++ +S +D + F+ M ++ + +I + R
Sbjct: 416 MQGNGYRPNDVT-YVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRA 474
Query: 252 GLVKEAHS---YLEKYPYSNIASWTNVIVG 278
G + +A YL+ P S + W+ ++ G
Sbjct: 475 GRLDDAKRLIHYLKIKPASG-SVWSALLGG 503
>gi|357138593|ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 664
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/617 (33%), Positives = 323/617 (52%), Gaps = 69/617 (11%)
Query: 13 FDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAK 72
FD+MP+R+ TWN MI G N L +A +F+ MP R+ ++ ++ G + V A+
Sbjct: 66 FDEMPERNVFTWNCMISGLVGNRMLADARRVFDAMPVRNPVSWAALLTGYARCGRVAEAR 125
Query: 73 EVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM-- 130
E+FD M R+VV+WN+M+SGY+ NG+++ A +F MP ++ VSW +I + +R+
Sbjct: 126 ELFDRMPDRNVVSWNAMMSGYLRNGMVERARELFDMMPSRNDVSWLTMISGYIKKRRLRE 185
Query: 131 -----DL------------------------AESYFKEMGARDVASWTIMVNGLVREGRI 161
DL AE F M RD SW +M+ G R GR+
Sbjct: 186 ARELFDLSPSHPTSVCNALLSGYVALSCLKDAEELFGRMQRRDPVSWNVMITGYARAGRM 245
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
A+ LFD+MP KD +W ++ GYL NG V + +FQ + DRD+ +W ++ G V S
Sbjct: 246 QVAQSLFDEMPQKDTISWTAVMRGYLQNGDVDASWKVFQDIPDRDVVAWNTMMGGFVQSE 305
Query: 222 RIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFE 281
R+D A+ F +M P ++ SW ++ G+ +
Sbjct: 306 RLDDALRLFAEM-------------------------------PERDLVSWNTILQGHVQ 334
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
G++ +A F M +D T WN +I G + E L +M G PD AT + V
Sbjct: 335 QGDMATANTWFRGMPEKDETSWNTLISGHKD----EGALALLSEMIRGGLRPDEATLSVV 390
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
++IC+ L L G+ +H A+K V +++I+MY++CG I A F + D
Sbjct: 391 ISICASLVALGYGKMVHLYAVKTGFEHDALVMSSLISMYSKCGLIAEASQVFKLLVQRDT 450
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
++WN++I AYHG A +AL+LF +M F+PD TF+ VLSAC++ G + +G YF
Sbjct: 451 VTWNAMIATYAYHGMASEALKLFNKMTKDGFRPDHATFLSVLSACAHKGDLYEGCRYFRS 510
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
M+ + L PRS HY+C+VDLLGR G I +A + +I +D + W L AC H
Sbjct: 511 MQEDWNLTPRSDHYSCMVDLLGRLGFIYQAYDFTRKIPSD---LQINAWETLFSACNAHG 567
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
++++GE+ + V++ P++ G+Y +L +Y S A + MKE G+KKE GCSW+
Sbjct: 568 DVQLGEVIAKDVLQARPSDGGMYTLLANIYASKEMWSSAASVRGVMKEQGLKKETGCSWV 627
Query: 582 QINDGGHVFLSGDSSHP 598
++ F S D++HP
Sbjct: 628 ELKGEVVSFSSNDNAHP 644
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 188/424 (44%), Gaps = 26/424 (6%)
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
D+ W ++ +R GR+ AR++FD+MP ++V WN MI+G + N + A +F M
Sbjct: 42 DIFQWNAVITAHLRAGRVAAARRVFDEMPERNVFTWNCMISGLVGNRMLADARRVFDAMP 101
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEK 263
R+ SW L+ G R+ A F +MP+ +WN+++S +RNG+V+ A +
Sbjct: 102 VRNPVSWAALLTGYARCGRVAEARELFDRMPDRNVVSWNAMMSGYLRNGMVERARELFDM 161
Query: 264 YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
P N SW +I GY + + A ++F+L + +V N ++ G ++ + F
Sbjct: 162 MPSRNDVSWLTMISGYIKKRRLREARELFDLSPSHPTSVCNALLSGYVALSCLKDAEELF 221
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYAR 382
+M+ P N T GR AQ++ Q T+S A++ Y +
Sbjct: 222 GRMQRRDPVSWNVMITGYARA---------GRMQVAQSLFDEMPQKDTISWTAVMRGYLQ 272
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
G++ ++ F +P D+++WN+++ G + AL LF M D +++ +
Sbjct: 273 NGDVDASWKVFQDIPDRDVVAWNTMMGGFVQSERLDDALRLFAEMPERDL----VSWNTI 328
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE-AMNLLNEIRAD 501
L G + +F M K + ++ G DE A+ LL+E+
Sbjct: 329 LQGHVQQGDMATANTWFRGMPEK-----DETSWNTLIS-----GHKDEGALALLSEMIRG 378
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGRREDA 560
G+ ++ C + G++ ++ +++ V L MY CG +A
Sbjct: 379 GLRPDEATLSVVISICASLVALGYGKMVHLYAVKTGFEHDALVMSSLISMYSKCGLIAEA 438
Query: 561 KRIF 564
++F
Sbjct: 439 SQVF 442
>gi|356528451|ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 579
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/569 (35%), Positives = 317/569 (55%), Gaps = 37/569 (6%)
Query: 50 RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
RD++ N I L ++ V A+++FD M +DVVTWNSM+S Y NGL+ + +FH M
Sbjct: 27 RDVYHANLDIVALSRAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNGLLQRSKALFHSM 86
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
PL++VVSWN +I A V + A Y ++ AS+ +++GL R GR+ +A++LF+
Sbjct: 87 PLRNVVSWNSIIAACVQNDNLQDAFRYLAAAPEKNAASYNAIISGLARCGRMKDAQRLFE 146
Query: 170 KMPAKDVQAWNLMIAGYLD-NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
MP +V ++ M+ GY G +G A LF+ M R+ S
Sbjct: 147 AMPCPNVVSYTAMVDGYARVEGGIGRARALFEAMPRRNSVS------------------- 187
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
W +I+ L+ NGL +EA + P N + T +I G+ + G + A
Sbjct: 188 ------------WVVMINGLVENGLCEEAWEVFVRMPQKNDVARTAMITGFCKEGRMEDA 235
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+F+ + RD+ WN+++ G +N GEE L F QM +G PD+ TF SV C+ L
Sbjct: 236 RDLFQEIRCRDLVSWNIIMTGYAQNGRGEEALNLFSQMIRTGMQPDDLTFVSVFIACASL 295
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
+L+ G + HA IK + +V NA+IT++++CG I + L F + D++SWN+II
Sbjct: 296 ASLEEGSKAHALLIKHGFDSDLSVCNALITVHSKCGGIVDSELVFGQISHPDLVSWNTII 355
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
A HG +KA F++M +PD ITF+ +LSAC AG V++ F M + Y +
Sbjct: 356 AAFAQHGLYDKARSYFDQMVTVSVQPDGITFLSLLSACCRAGKVNESMNLFSLMVDNYGI 415
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
PRS HY C+VD++ R G + A ++NE+ + ++WGA+L AC +H N+++GE+
Sbjct: 416 PPRSEHYACLVDVMSRAGQLQRACKIINEM---PFKADSSIWGAVLAACSVHLNVELGEL 472
Query: 529 AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGH 588
A R++ L+P NSG Y++L+ +Y + G+ +D RI MKE GVKK+ SW+QI + H
Sbjct: 473 AARRILNLDPFNSGAYVMLSNIYAAAGKWKDVHRIRVLMKEQGVKKQTAYSWLQIGNKTH 532
Query: 589 VFLSGDSSHPKFHRLRYLLN--LLHTEIE 615
F+ GD SHP + + L LH +++
Sbjct: 533 YFVGGDPSHPNINDIHVALRRITLHMKVK 561
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 225/447 (50%), Gaps = 19/447 (4%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R ++ A+ LFD+M +D VTWN M+ Y++NG L + LF+ MP R++ ++N++IA
Sbjct: 41 RAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNGLLQRSKALFHSMPLRNVVSWNSIIAA 100
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+Q+DN+Q A ++ ++N++ISG G + +A R+F MP +VVS+ ++
Sbjct: 101 CVQNDNLQDAFRYLAAAPEKNAASYNAIISGLARCGRMKDAQRLFEAMPCPNVVSYTAMV 160
Query: 122 GALVNCQ-RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ + A + F+ M R+ SW +M+NGLV G EA ++F +MP K+ A
Sbjct: 161 DGYARVEGGIGRARALFEAMPRRNSVSWVVMINGLVENGLCEEAWEVFVRMPQKNDVART 220
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MI G+ G + A DLFQ++ RDL SW ++ G + R + A++ F QM T +
Sbjct: 221 AMITGFCKEGRMEDARDLFQEIRCRDLVSWNIIMTGYAQNGRGEEALNLFSQMIRTGMQP 280
Query: 241 WN-SIISVLIRNGLV------KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVF 292
+ + +SV I + +AH+ L K+ + S+++ +I + + G + + VF
Sbjct: 281 DDLTFVSVFIACASLASLEEGSKAHALLIKHGFDSDLSVCNALITVHSKCGGIVDSELVF 340
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
++ D+ WN +I ++ L ++ +F QM PD TF S+L+ C ++
Sbjct: 341 GQISHPDLVSWNTIIAAFAQHGLYDKARSYFDQMVTVSVQPDGITFLSLLSACCRAGKVN 400
Query: 353 LGRQIHAQAIK----IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSI 407
+ + + R++ ++ + +R G +Q A + +P D W ++
Sbjct: 401 ESMNLFSLMVDNYGIPPRSEHYA---CLVDVMSRAGQLQRACKIINEMPFKADSSIWGAV 457
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKP 434
+ + H E EL R R+ + P
Sbjct: 458 LAACSVHLNVELG-ELAAR-RILNLDP 482
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 157/314 (50%), Gaps = 25/314 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N +Q+A P+++ ++N +I G + G + +A LF MP ++ +Y ++
Sbjct: 102 VQNDNLQDAFRYLAAAPEKNAASYNAIISGLARCGRMKDAQRLFEAMPCPNVVSYTAMVD 161
Query: 61 GLMQSDNVQG-AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
G + + G A+ +F+ M R+ V+W MI+G V NGL +EA VF MP K+ V+
Sbjct: 162 GYARVEGGIGRARALFEAMPRRNSVSWVVMINGLVENGLCEEAWEVFVRMPQKNDVARTA 221
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
+I RM+ A F+E+ RD+ SW I++ G + GR EA LF +M +Q
Sbjct: 222 MITGFCKEGRMEDARDLFQEIRCRDLVSWNIIMTGYAQNGRGEEALNLFSQMIRTGMQPD 281
Query: 180 NL-MIAGYLDNGCVGVAED-------LFQKMHDRDLTSWKQLIN------GLVNSRRIDA 225
+L ++ ++ + E+ L + D DL+ LI G+V+S +
Sbjct: 282 DLTFVSVFIACASLASLEEGSKAHALLIKHGFDSDLSVCNALITVHSKCGGIVDSELVFG 341
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYFE 281
IS+ P+ +WN+II+ ++GL +A SY ++ ++ ++ +++
Sbjct: 342 QISH----PDLV--SWNTIIAAFAQHGLYDKARSYFDQMVTVSVQPDGITFLSLLSACCR 395
Query: 282 MGEVGSAIKVFELM 295
G+V ++ +F LM
Sbjct: 396 AGKVNESMNLFSLM 409
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 20/265 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+ N +EA +F +MPQ++ V MI G+ K G +++A LF ++ RD+ ++N ++
Sbjct: 196 VENGLCEEAWEVFVRMPQKNDVARTAMITGFCKEGRMEDARDLFQEIRCRDLVSWNIIMT 255
Query: 61 GLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMIS----GYVCNGLIDEALRVFHGMPL 111
G Q+ + A +F GM+ D+ + I+ + G AL + HG
Sbjct: 256 GYAQNGRGEEALNLFSQMIRTGMQPDDLTFVSVFIACASLASLEEGSKAHALLIKHGFD- 314
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
D+ N +I C + +E F ++ D+ SW ++ + G +AR FD+M
Sbjct: 315 SDLSVCNALITVHSKCGGIVDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSYFDQM 374
Query: 172 PAKDVQAWNLMIAGYLDNGC----VGVAEDLFQKMHDR-----DLTSWKQLINGLVNSRR 222
VQ + L C V + +LF M D + L++ + + +
Sbjct: 375 VTVSVQPDGITFLSLLSACCRAGKVNESMNLFSLMVDNYGIPPRSEHYACLVDVMSRAGQ 434
Query: 223 IDAAISYFKQMPETCEKT-WNSIIS 246
+ A +MP + + W ++++
Sbjct: 435 LQRACKIINEMPFKADSSIWGAVLA 459
>gi|242082435|ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
gi|241942336|gb|EES15481.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
Length = 567
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/529 (37%), Positives = 302/529 (57%), Gaps = 6/529 (1%)
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDL--AES 135
+ R ++ N IS G + A RVF MP +DVVSWN ++ AL R L A
Sbjct: 10 LAARRLLRDNQRISALARAGDVAAARRVFDAMPHRDVVSWNALLTALWRAGRHHLPAARR 69
Query: 136 YFKE-MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
F E M +RDV SW ++ G + G + A F P ++V WN M+AG L G
Sbjct: 70 LFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPKRNVATWNAMLAGLLRLGRADD 129
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A+ LF +M R++ S+ +++GL + A F MP+ +W ++IS + NG+
Sbjct: 130 ADRLFGEMPKRNVVSYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYVENGMF 189
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
EA E P N+ + T +I Y + G+V SA ++F+ + +DV WN MI G N
Sbjct: 190 VEATKLFEAMPEKNVVACTAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAGYVHNG 249
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
GEE ++ M G PD+AT +VLT CS L L G+ HA AIK + SN
Sbjct: 250 HGEEAMRLHAVMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFSN 309
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
A++TMY++CGN+ + L F ++ DI+SWN+II A HG +K + LF M +T P
Sbjct: 310 ALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEMTGLIP 369
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
DDITF+ VLSAC + G VD FD M +KY + PR+ HY C+VD+L R G +++A +
Sbjct: 370 DDITFLSVLSACGHVGKVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSY 429
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
+ ++ +E VWG+LLGAC++H N+++GE+A + +++ + +SG Y+IL+ +Y +
Sbjct: 430 IKDM---PLEAEKNVWGSLLGACQMHGNVQLGELAAKMLVQSDSESSGPYVILSNIYAAA 486
Query: 555 GRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL 603
G ++ QMKE GVKK+PG SW +I + H+F+ GD+SHP+ ++
Sbjct: 487 GMWGQVNQVRGQMKERGVKKQPGYSWTEIANEVHMFVGGDASHPEMRKI 535
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 215/429 (50%), Gaps = 17/429 (3%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNG--FLDNAMCLFNQ-MPERDMFTYNTV 58
R + A+ +FD MP RD V+WN ++ ++ G L A LF++ MP RD+ ++N++
Sbjct: 27 RAGDVAAARRVFDAMPHRDVVSWNALLTALWRAGRHHLPAARRLFDEAMPSRDVVSWNSI 86
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
IAG + ++ A F G R+V TWN+M++G + G D+A R+F MP ++VVS+
Sbjct: 87 IAGCLAHGDLDAASAYFAGAPKRNVATWNAMLAGLLRLGRADDADRLFGEMPKRNVVSYT 146
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
++ L + A F M R++ SW M++G V G VEA KLF+ MP K+V A
Sbjct: 147 TMVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYVENGMFVEATKLFEAMPEKNVVA 206
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETC 237
MI Y G V A LF + +D+ SW +I G V++ + A+ M E
Sbjct: 207 CTAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAGYVHNGHGEEAMRLHAVMFREGV 266
Query: 238 EKTWNSIISV--------LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSA 288
+ ++I+V L+R G K H+ K + S++N ++ Y + G VG +
Sbjct: 267 KPDHATLIAVLTACSALALLRQG--KSTHAIAIKAMLESGISFSNALMTMYSKCGNVGES 324
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
VF + T+D+ WN +I ++ ++ + F +M+ +G PD+ TF SVL+ C +
Sbjct: 325 ELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEMTGLIPDDITFLSVLSACGHV 384
Query: 349 PTLDLGRQI-HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNS 406
+D ++ + K A + ++ + +R G ++ A +P+ + W S
Sbjct: 385 GKVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSYIKDMPLEAEKNVWGS 444
Query: 407 IICGLAYHG 415
++ HG
Sbjct: 445 LLGACQMHG 453
>gi|297847764|ref|XP_002891763.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
gi|297337605|gb|EFH68022.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/666 (31%), Positives = 366/666 (54%), Gaps = 47/666 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
RN +QEA+ +F +M R V+WN MI Y +NG + A +F++MP R +YN +I
Sbjct: 62 RNGNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMPVRATTSYNAMITA 121
Query: 62 LMQSD-NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK--DVVSWN 118
++++ ++ A E+F + ++ V++ +MI+G+V G DEA ++ P+K D V+ N
Sbjct: 122 MIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAECLYAETPVKFRDPVASN 181
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+++ + + + A F+ M ++V S++ MV+G + GRI++AR LFD+MP ++V
Sbjct: 182 VLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILDARSLFDRMPERNVIT 241
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHD------------------RDLTSWKQ--LINGLV 218
W MI GY G LF +M RD +++ I+GL+
Sbjct: 242 WTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVMFRACRDFFRYREGSQIHGLL 301
Query: 219 NSRRID-------AAISYFKQMPETCEK-------------TWNSIISVLIRNGLVKEAH 258
+ ++ + IS + ++ E +WNS+I+ L++ + EA+
Sbjct: 302 SRMPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVSWNSLITGLVQREQISEAY 361
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
EK P ++ SWT++I G+ GE+ +++F +M +D W MI N EE
Sbjct: 362 ELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDDITWTAMISAFVSNGYYEE 421
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L +F +M P++ TF+SVL+ + L L G QIH + +K+ +V N++++
Sbjct: 422 ALCWFHKMLRKQVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNMANDLSVQNSLVS 481
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MY +CGN A FS + +I+S+N++I G +Y+G+ ++A++LF + T +P+ +T
Sbjct: 482 MYCKCGNTNDAYKIFSCISEPNIVSYNTMISGFSYNGFGKEAVKLFSMLESTGKEPNGVT 541
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
F+ +LSAC + G VD G YF MK Y ++P HY C+VDL GR GL+DEA NL++ +
Sbjct: 542 FLALLSACVHVGYVDLGWKYFKSMKFSYGIEPGPDHYACMVDLFGRSGLLDEAYNLISTM 601
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
E VWG+LL A + H + + E+A ++++ELEP+++ Y++L+++Y G+
Sbjct: 602 PC---EPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSMVGKNS 658
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREI 618
D RI K +KK+PG SWI + H FL+GD SH + + L+++ E+E I
Sbjct: 659 DCDRIMNIKKSKRIKKDPGSSWIILKGQVHNFLAGDESHLNLEEIAFTLDMIGNEMEL-I 717
Query: 619 LFDAYY 624
F ++
Sbjct: 718 TFGGFF 723
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 221/465 (47%), Gaps = 25/465 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + EA +F+ M ++ V+++ M+ GY K G + +A LF++MPER++ T+ +I
Sbjct: 188 LRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILDARSLFDRMPERNVITWTAMID 247
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLID-----EALRVFHG----MPL 111
G ++ + +F M V NS + D E ++ HG MPL
Sbjct: 248 GYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVMFRACRDFFRYREGSQI-HGLLSRMPL 306
Query: 112 K-DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+ D+ N +I M A++ F M +D SW ++ GLV+ +I EA +LF+K
Sbjct: 307 EFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVSWNSLITGLVQREQISEAYELFEK 366
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
MP KD+ +W MI G+ G + +LF M ++D +W +I+ V++ + A+ +F
Sbjct: 367 MPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDDITWTAMISAFVSNGYYEEALCWF 426
Query: 231 KQM--PETCEK--TWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YFEM 282
+M + C T++S++S + E H + K +N S N +V Y +
Sbjct: 427 HKMLRKQVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNMANDLSVQNSLVSMYCKC 486
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G A K+F ++ ++ +N MI G N G+E +K F ++ +G P+ TF ++L
Sbjct: 487 GNTNDAYKIFSCISEPNIVSYNTMISGFSYNGFGKEAVKLFSMLESTGKEPNGVTFLALL 546
Query: 343 TICSDLPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI--H 399
+ C + +DLG + + M+ ++ R G + A S++P H
Sbjct: 547 SACVHVGYVDLGWKYFKSMKFSYGIEPGPDHYACMVDLFGRSGLLDEAYNLISTMPCEPH 606
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+ W S++ H + A EL + +L + +PD T VLS
Sbjct: 607 SGV-WGSLLSASKTHLRVDLA-ELAAK-KLIELEPDSATPYVVLS 648
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 13/216 (6%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
NS IS L RNG ++EA + + + +I SW +I Y E G++ A +VF+ M R T
Sbjct: 54 NSQISKLARNGNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMPVRATT 113
Query: 302 VWNVMIFGLGEN--DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
+N MI + +N DLG + + F + P + ++ +++T D ++A
Sbjct: 114 SYNAMITAMIKNKCDLG-KAYELFCDI----PEKNAVSYATMITGFVRAGRFDEAECLYA 168
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
+ R+ SN +++ Y R G A+ F + + +++S++S++ G G
Sbjct: 169 ETPVKFRDP--VASNVLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILD 226
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
A LF+RM + + IT+ ++ AG + G
Sbjct: 227 ARSLFDRMP----ERNVITWTAMIDGYFKAGFFEDG 258
>gi|357118286|ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Brachypodium distachyon]
Length = 676
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/608 (34%), Positives = 335/608 (55%), Gaps = 26/608 (4%)
Query: 13 FDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL---MQSDNVQ 69
FD +P R VTWN + + + A F MP RD ++NT++A + S+++
Sbjct: 53 FDALPARSVVTWNSFLAALARGRDVAAARAFFASMPVRDAVSWNTLLAAYSRSLNSEHLA 112
Query: 70 GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQR 129
A+ +FD M RD VTWN+++ YV GL+ EA ++F MP ++V SWN ++ + +
Sbjct: 113 AARRLFDEMPQRDAVTWNTLLGAYVRRGLMVEAEKLFDEMPQRNVASWNTMVTGFFSAGQ 172
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK-MPAKD----VQAWNLMIA 184
++ A F M +D AS +V+G ++ GR+ EA +L K + D V A+N +IA
Sbjct: 173 VNKALDMFDAMPVKDSASLGTLVSGFIKNGRLHEAEELLTKRLRVTDMDEAVDAYNTLIA 232
Query: 185 GYLDNGCVGVAEDLFQ--------------KMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
Y G V A LF ++ R++ SW ++ + + + +A F
Sbjct: 233 AYGQVGRVSDARRLFDMIPRGQYQCKTNNMRVFARNVVSWNSMMTCYIRTGDVCSAREIF 292
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+MP+ +WN++I+ + ++EA + P +I SW +I G+ + G+V A
Sbjct: 293 NEMPDKDLVSWNTMIAGYTKVSDMEEAEKLFWEMPDPDIVSWNLIIRGFTQKGDVEHARG 352
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
F+ M R WN MI G +N + ++ F +M E+G +PD TF+SVL C+ LP
Sbjct: 353 FFDRMPERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFSSVLAACASLPM 412
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
L LG Q+H Q I+ + T SNA++TMY+R G + A F +P D++SWN++I G
Sbjct: 413 LRLGAQLH-QLIEKSFLPDTATSNALMTMYSRGGALTDAEAIFKQMPQKDLVSWNALIGG 471
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
+HG A +AL+LFE MR P ITF+ +LSAC AGLV +G FD M ++Y +
Sbjct: 472 YEHHGCATEALQLFEDMRSARVMPTHITFISLLSACGNAGLVSEGWMVFDTMIHEYSIAA 531
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
R HY +V+L+GR G +D+A+ ++N + I +VWGA LGAC N + +A
Sbjct: 532 RIEHYAALVNLIGRHGQLDDALEVINSM---PIAPDRSVWGAFLGACTAKKNELLAHMAA 588
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVF 590
+ + +++P +S Y+++ ++ GR A + +M++ G+ K PG SWI ++D HVF
Sbjct: 589 KALSKIDPESSAPYVLIHNLHAHEGRWGSASVVREEMEQQGIHKHPGYSWIDLHDKVHVF 648
Query: 591 LSGDSSHP 598
+SGD+SHP
Sbjct: 649 ISGDTSHP 656
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/641 (32%), Positives = 344/641 (53%), Gaps = 70/641 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R+ RI EA+ LFD MP R+ V+WN MI +G + +A LF++MP RD F++ +++
Sbjct: 61 RHGRIDEARALFDGMPSRNAVSWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSC 120
Query: 62 LMQSDNVQGAKEVFDGMEV-RDVVTWNSMISGYVCNGLIDEALRVFHGMPL--------- 111
++ ++ A++V D M + +N+MISGY NG D+A+++ MP
Sbjct: 121 YARAGELELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAVKLLREMPAPDLFSWNSA 180
Query: 112 ----------------------KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
KD+VSWNL++ V +D A S+F + + +V SW
Sbjct: 181 LAGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWV 240
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
++NG R GRI +AR LFD+MP ++V A N+M+ GY+ + A LF +M ++ S
Sbjct: 241 TLLNGYCRAGRISDARDLFDRMPERNVVACNVMLDGYVRLSRLEEACKLFDEMPGKNSIS 300
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETC--EKT--------------------------- 240
W +I+GL + ++ A +M C KT
Sbjct: 301 WTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMVNDARQIFDGMEVHDT 360
Query: 241 --WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
WN++IS ++ G+++EA ++ P + SW +I GY + G++ AI +F M+ +
Sbjct: 361 VCWNTMISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIGIFRRMSRK 420
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
+ WN +I G +N L + F+ M+ D +T+ S L C++L L +GRQ+H
Sbjct: 421 NTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACANLAALHVGRQLH 480
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
+ ++ NA+I+ YA+CG + A F + DI+SWN+++ G A +G
Sbjct: 481 SLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKDIVSWNALVDGYASNGQGT 540
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
+A+ +F M +PD++TFVG+LSACS AGL+D+G +F+ M +Y L+P + HY C+
Sbjct: 541 EAISVFREMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEEYSLKPVAEHYACM 600
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGERVMEL 536
DLLGR G ++EA L+ G+++ P VWGALLGAC+++ N ++ +A E++ EL
Sbjct: 601 ADLLGRAGKLNEAFELVQ-----GMQIQPNAGVWGALLGACQMYKNHELARLAAEKLSEL 655
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
EP + Y++L+ + G+ ++A++ A +KE G K PG
Sbjct: 656 EPCRASNYVLLSNISAEAGKWDEAEKARASIKEKGANKPPG 696
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 150/539 (27%), Positives = 252/539 (46%), Gaps = 28/539 (5%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+F N + L +S + A+ +FD M R+ VT+NSM+S +G IDEA +F GMP
Sbjct: 18 VFRSNQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPS 77
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
++ VSWN +I AL + R+ A F M +RD SWT+MV+ R G + AR + D+M
Sbjct: 78 RNAVSWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDVLDRM 137
Query: 172 PAKDVQA-WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
P A +N MI+GY NG A L ++M DL SW + GL S ++ A+ +F
Sbjct: 138 PGDKCTACYNAMISGYAKNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFF 197
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+M E +WN ++ +R G + A S+ + N+ SW ++ GY G + A
Sbjct: 198 DEMVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDARD 257
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+F+ M R+V NVM+ G EE K F +M P ++ ++T++++ +
Sbjct: 258 LFDRMPERNVVACNVMLDGYVRLSRLEEACKLFDEM----PGKNSISWTTIISGLARAGK 313
Query: 351 LDLGRQIHAQAIKIARNQFTTVS--NAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
L + + + + F V+ A++ Y + + A F + +HD + WN++I
Sbjct: 314 LQEAKDL------LDKMSFNCVAAKTALMHGYLQRNMVNDARQIFDGMEVHDTVCWNTMI 367
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
G G E+A+ LF+RM D +++ +++ + G + + F M K
Sbjct: 368 SGYVQRGMLEEAMLLFQRMP----NKDTVSWNTMIAGYAQGGQMRKAIGIFRRMSRK--- 420
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-E 527
+ + V+ + GL +A + +R + + + L AC + VG +
Sbjct: 421 --NTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACANLAALHVGRQ 478
Query: 528 IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
+ V N+ L Y CGR +AK+IF +M + SW + DG
Sbjct: 479 LHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKDI-----VSWNALVDG 532
>gi|413925171|gb|AFW65103.1| hypothetical protein ZEAMMB73_773985 [Zea mays]
Length = 567
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/529 (37%), Positives = 304/529 (57%), Gaps = 6/529 (1%)
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDL--AES 135
+ R ++ N IS G + A RVF M +DVVSWN ++ AL R L A
Sbjct: 10 LAARRLLRDNQRISALARAGDVAAARRVFDAMTHRDVVSWNALLTALWRAGRHHLPAARR 69
Query: 136 YFKE-MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
F E M +RDV SW ++ G + G + A F P ++V WN M+AG + G V
Sbjct: 70 LFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPERNVATWNAMLAGLVRLGRVVD 129
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A+ LF +M +R++ S+ +++ L ++ A F MP+ +W ++IS + NG+
Sbjct: 130 AQRLFDEMPERNVVSYTTMVDWLARRGEVERAREVFDSMPDRNLVSWAAMISGCVENGMF 189
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
EA E P N+ + T +I G+ + G+V SA ++F+ + +DV WN MI G N
Sbjct: 190 VEARELFEAMPEKNVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMIAGYVHNG 249
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
GEE ++ M G PD+AT +VLT CS L L G+ HA AIK + SN
Sbjct: 250 HGEEAMRLHALMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFSN 309
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
A++TMY++CGN+ + L F ++ DI+SWN+II A HG +K + LF M +T P
Sbjct: 310 ALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEVTGLIP 369
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
DDITF+ VLSAC + G+VD FD M +KY + PR+ HY C+VD+L R G +++A +
Sbjct: 370 DDITFLSVLSACGHVGMVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSY 429
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
+ + ++ VWG+LLGAC+IH N+++GE+A + +++ + +SG Y+IL+ +Y +
Sbjct: 430 IKHM---PLKAEKNVWGSLLGACQIHGNVQLGELAAKMLVQSDSQSSGPYVILSNIYAAA 486
Query: 555 GRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL 603
G +I QMKE GVKK+PG SW +I + H+F+ GD+SHP+ ++
Sbjct: 487 GMWGQVNQIRGQMKERGVKKQPGYSWTEIGNEVHMFVGGDASHPEMRKI 535
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 217/429 (50%), Gaps = 17/429 (3%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNG--FLDNAMCLFNQ-MPERDMFTYNTV 58
R + A+ +FD M RD V+WN ++ ++ G L A LF++ MP RD+ ++N++
Sbjct: 27 RAGDVAAARRVFDAMTHRDVVSWNALLTALWRAGRHHLPAARRLFDEAMPSRDVVSWNSI 86
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
IAG + ++ A F G R+V TWN+M++G V G + +A R+F MP ++VVS+
Sbjct: 87 IAGCLAHGDLDAASAYFAGAPERNVATWNAMLAGLVRLGRVVDAQRLFDEMPERNVVSYT 146
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
++ L ++ A F M R++ SW M++G V G VEAR+LF+ MP K+V A
Sbjct: 147 TMVDWLARRGEVERAREVFDSMPDRNLVSWAAMISGCVENGMFVEARELFEAMPEKNVVA 206
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETC 237
MI G+ G V A LF + +D+ SW +I G V++ + A+ M E
Sbjct: 207 CTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMIAGYVHNGHGEEAMRLHALMFREGV 266
Query: 238 EKTWNSIISV--------LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSA 288
+ ++I+V L+R G K H+ K + S++N ++ Y + G VG +
Sbjct: 267 KPDHATLIAVLTACSALALLRQG--KSTHAIAIKAMLESGISFSNALMTMYSKCGNVGES 324
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
VF + T+D+ WN +I ++ ++ + F +M+ +G PD+ TF SVL+ C +
Sbjct: 325 ELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEVTGLIPDDITFLSVLSACGHV 384
Query: 349 PTLDLGRQI-HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNS 406
+D ++ + K A + ++ + +R G ++ A +P+ + W S
Sbjct: 385 GMVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSYIKHMPLKAEKNVWGS 444
Query: 407 IICGLAYHG 415
++ HG
Sbjct: 445 LLGACQIHG 453
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 170/357 (47%), Gaps = 29/357 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R R+ +AQ LFD+MP+R+ V++ M+ + G ++ A +F+ MP+R++ ++ +I+
Sbjct: 122 VRLGRVVDAQRLFDEMPERNVVSYTTMVDWLARRGEVERAREVFDSMPDRNLVSWAAMIS 181
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +++ A+E+F+ M ++VV +MI+G+ G +D A R+F G+ KDV+SWN +
Sbjct: 182 GCVENGMFVEARELFEAMPEKNVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAM 241
Query: 121 IGALVNC----QRMDLAESYFKEMGARDVASWTIMVN-----GLVREGRIVEARKLFDKM 171
I V+ + M L F+E D A+ ++ L+R+G+ A + M
Sbjct: 242 IAGYVHNGHGEEAMRLHALMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAI-KAM 300
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
+ N ++ Y G VG +E +F + +D+ SW +I + I+ F
Sbjct: 301 LESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFH 360
Query: 232 QMPETC----EKTWNSIISVLIRNGLVKEAHSYLE----KYPYSNIASWTNVIVGYF--- 280
+M T + T+ S++S G+V + + KY S A IV
Sbjct: 361 EMEVTGLIPDDITFLSVLSACGHVGMVDASLKLFDLMSSKYAISPRAEHYACIVDILSRA 420
Query: 281 -EMGEVGSAIKVFELMTTRDVTVWNVMIFGL---GENDLGEEGLKFFVQ--MKESGP 331
++ + S IK L ++ VW ++ G LGE K VQ + SGP
Sbjct: 421 GQLEKASSYIKHMPLKAEKN--VWGSLLGACQIHGNVQLGELAAKMLVQSDSQSSGP 475
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/643 (33%), Positives = 349/643 (54%), Gaps = 54/643 (8%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ Y K G +A LF++MP + F++NT+++ ++ N+ A+ VFD + D V
Sbjct: 52 NNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSV 111
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAE---SYF 137
+W +MI GY GL A+ F M + ++ V+ + Q +D+ + S+
Sbjct: 112 SWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFV 171
Query: 138 KEMGARDVASWT-IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
++G V ++N + G V A+ +FD+M KD WN MI+ ++ +A
Sbjct: 172 VKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLAL 231
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE------------------ 238
LF +M D D+ SW +I G + A+ F M ++
Sbjct: 232 ALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANR 291
Query: 239 ----------------------KTWNSIISVLIRNGLVKEAHSYLE--KYPYSNIASWTN 274
N++IS+ ++G V+ AH +E P N+ ++T+
Sbjct: 292 ESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTS 351
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ GYF++G++ A +F+ + RDV W MI G +N L + L F M GP P+
Sbjct: 352 LLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPN 411
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
N T +VL++ S L +LD G+Q+HA AI++ +V NA+ITMY+R G+I+ A F+
Sbjct: 412 NYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFN 471
Query: 395 SV-PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ D ++W S+I LA HG +A+ELFE+M + KPD IT+VGVLSAC++ GLV+
Sbjct: 472 HICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVE 531
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
QG+ YF+ MKN + ++P S+HY C++DLLGR GL++EA N IR IE WG+L
Sbjct: 532 QGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNF---IRNMPIEPDVVAWGSL 588
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
L +CR+H + + ++A E+++ ++PNNSG YL L +CG+ EDA ++ MK+ VK
Sbjct: 589 LSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVK 648
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
KE G SW+QI + H+F D+ HP+ + +++ + EI++
Sbjct: 649 KEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKK 691
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 176/420 (41%), Gaps = 57/420 (13%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
A+ + G+ V N++++ YV G +A R+F MPLK SWN ++ A +
Sbjct: 36 ARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNL 95
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
D A F E+ D SWT M+ G G A F +M + + L +
Sbjct: 96 DSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASC 155
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
A D+ +K+H + L S + A NS++++ +
Sbjct: 156 AAAQALDVGKKVH--------SFVVKLGQSGVVPVA---------------NSLLNMYAK 192
Query: 251 NGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
G A ++ + ++W +I + + + A+ +F+ MT D+ WN +I G
Sbjct: 193 CGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGY 252
Query: 311 GENDLGEEGLKFF-VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
L+ F +K S PD T SVL+ C++ +L LG+QIHA ++ +
Sbjct: 253 CHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIA 312
Query: 370 TTVSNAMITMYARCGNIQ-------------------SALLE--------------FSSV 396
V NA+I+MYA+ G ++ ++LL+ F S+
Sbjct: 313 GAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSL 372
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
D+++W ++I G A +G AL LF M KP++ T VLS S +D G+
Sbjct: 373 KHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGK 432
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/465 (22%), Positives = 199/465 (42%), Gaps = 76/465 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTY 55
M+ + A LFD+M D V+WN +I GY G+ A+ F+ M + D FT
Sbjct: 222 MQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTL 281
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEALRVFH--GM 109
+V++ ++++ K++ + DV N++IS Y +G ++ A R+ G
Sbjct: 282 GSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGT 341
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
P +V+++ ++ +D A + F + RDV +WT M+ G + G I +A LF
Sbjct: 342 PSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFR 401
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
M + + N +A L ++S L +G +++ A
Sbjct: 402 LMIREGPKPNNYTLAAVLSV-----------------ISSLASLDHG----KQLHAVAIR 440
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY-PYSNIASWTNVIVGYFEMGEVGSA 288
+++ N++I++ R+G +K+A Y + +WT++I+
Sbjct: 441 LEEVSSV--SVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMIL----------- 487
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
L ++ LG E ++ F +M PD+ T+ VL+ C+ +
Sbjct: 488 --------------------SLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHV 527
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWN 405
++ G+ + +K N T S+ MI + R G ++ A ++PI D+++W
Sbjct: 528 GLVEQGKS-YFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWG 586
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDD----ITFVGVLSAC 446
S++ H Y + A E++ L D P++ + LSAC
Sbjct: 587 SLLSSCRVHKYVDLAKVAAEKLLLID--PNNSGAYLALANTLSAC 629
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 100/249 (40%), Gaps = 48/249 (19%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLD--LGRQIHAQAIKIA-RNQFTTVSNAMITMYAR 382
M P+P + + V + S + + D +GR IHA+ IK R ++N ++ +Y +
Sbjct: 1 MLTPTPNPPSHSDACVHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVK 60
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
G+ A F +P+ SWN+I
Sbjct: 61 TGSSSDAHRLFDEMPLKTTFSWNTI----------------------------------- 85
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
LSA + AG +D R FD + QP S +T ++ GL A++ + + G
Sbjct: 86 LSAHAKAGNLDSARRVFDEIP-----QPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSG 140
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI---LTEMYLSCGRRED 559
I + + +L +C + VG+ V++L SGV + L MY CG
Sbjct: 141 ISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKL--GQSGVVPVANSLLNMYAKCGDSVM 198
Query: 560 AKRIFAQMK 568
AK +F +M+
Sbjct: 199 AKVVFDRMR 207
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/566 (34%), Positives = 318/566 (56%), Gaps = 7/566 (1%)
Query: 51 DMFTY----NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF 106
D F++ N IA L + V A+ +FD RDVV+W +M++ Y G + EA +
Sbjct: 34 DAFSHVQDPNRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALL 93
Query: 107 HGM-PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
H ++VV+W ++ +R+D A + F M R+V SW M+ GR+ A
Sbjct: 94 HRPDARRNVVTWTALLSGYARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAAC 153
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
LFD MP +D +WN+++A + +G + A LF++M +R++ SW +I+GL S D
Sbjct: 154 ALFDGMPVRDAGSWNILLAALVRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADE 213
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEV 285
A + F MPE +WN++IS RN + EA P ++ASW +I G+ + ++
Sbjct: 214 ARALFDGMPERNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDL 273
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A ++F+ M R+V W M+ G + + E L+ F M G P+ TF +
Sbjct: 274 KKAQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAG 333
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
S+L L G+Q+H K + ++++ +YA+CG I+ A F D+ISWN
Sbjct: 334 SNLAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWN 393
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNK 465
+I A+HG +A+ L+E+M+ +KP+D+T+VG+LSACS++GLVD+G F+ M
Sbjct: 394 GMIAAYAHHGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKD 453
Query: 466 YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKV 525
+ R HY+C++DL R G +D+A L+N ++ S TVW ALLG C H N +
Sbjct: 454 KSIAVRDEHYSCLIDLCSRAGRLDDAKRLINGLKLK--PTSSTVWSALLGGCNAHGNESI 511
Query: 526 GEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
G++A ++E EP+N+G Y +L+ +Y S G+ ++A +I ++M + G+KK+PGCSWI++ +
Sbjct: 512 GDLAARNLLEAEPDNAGTYTLLSNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIELAN 571
Query: 586 GGHVFLSGDSSHPKFHRLRYLLNLLH 611
HVF++ D SH + + LL +H
Sbjct: 572 KVHVFVARDKSHSESELIYSLLQDIH 597
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 245/487 (50%), Gaps = 53/487 (10%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-PERDMFTYNTVIAGLM 63
R+ +A+ LFD+ P RD V+W M+ Y + G L A L ++ R++ T+ +++G
Sbjct: 54 RVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALLHRPDARRNVVTWTALLSGYA 113
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
++ V A+ +FD M R+VV+WN+M+ Y G + A +F GMP++D SWN+++ A
Sbjct: 114 RARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAGSWNILLAA 173
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
LV MD A F+ M R+V SWT M++GL R G EAR LFD MP ++V +WN MI
Sbjct: 174 LVRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALFDGMPERNVVSWNAMI 233
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS 243
+GY N + A DLF M +RD+ SW +I G + ++ + A F +MP+ +W +
Sbjct: 234 SGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTT 293
Query: 244 I-----------ISVLIRNGLV---------------------------KEAHSYLEKYP 265
+ +++ + NG++ ++ H + K P
Sbjct: 294 MMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTP 353
Query: 266 YS--NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
+ N ++++ Y + GE+ A KVF+L +DV WN MI + G E + +
Sbjct: 354 FQFDNFIE-SSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIALY 412
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN----AMITM 379
+M+E+ P++ T+ +L+ CS +D G +I +A+++ V + +I +
Sbjct: 413 EKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEY---MAKDKSIAVRDEHYSCLIDL 469
Query: 380 YARCGNIQSALLEFSSVPIHDIIS--WNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
+R G + A + + + S W++++ G HG E +L R L + +PD+
Sbjct: 470 CSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGCNAHGN-ESIGDLAAR-NLLEAEPDNA 527
Query: 438 TFVGVLS 444
+LS
Sbjct: 528 GTYTLLS 534
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 157/329 (47%), Gaps = 52/329 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ + EA+ LF++MP+R+ ++W MI G ++G D A LF+ MPER++ ++N +I+
Sbjct: 175 VRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALFDGMPERNVVSWNAMIS 234
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ + A ++F M RDV +WN MI+G++ N + +A +F MP ++VVSW +
Sbjct: 235 GYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTM 294
Query: 121 IGALVNCQRMDLAESYFKEM-------------GARDVAS-------------------- 147
+ + ++A F M GA D S
Sbjct: 295 MNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPF 354
Query: 148 ------WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+ ++ + G I ARK+FD KDV +WN MIA Y +G A L++K
Sbjct: 355 QFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIALYEK 414
Query: 202 MHD-----RDLTSWKQLINGLVNSRRIDAAISYFKQMPE-----TCEKTWNSIISVLIRN 251
M + D+T + L++ +S +D + F+ M + ++ ++ +I + R
Sbjct: 415 MQENRYKPNDVT-YVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCSRA 473
Query: 252 GLVKEAHSYLE--KYPYSNIASWTNVIVG 278
G + +A + K ++ W+ ++ G
Sbjct: 474 GRLDDAKRLINGLKLKPTSSTVWSALLGG 502
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/557 (34%), Positives = 317/557 (56%), Gaps = 3/557 (0%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-HGMPLKDV 114
N +IA L + V A+++FDG DVV+W +++S Y G++ +A +F ++V
Sbjct: 46 NRLIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDRPDARRNV 105
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
V+W ++ + +D AE+ F+ M R+V SW M+ GR+ +A LFD+MP +
Sbjct: 106 VTWTALLSGYARARLVDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACALFDRMPVR 165
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
D +WN+++A + +G V A +LF +M +RD+ +W +++G+ S ++D A F MP
Sbjct: 166 DAGSWNILLATLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDSMP 225
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFEL 294
E +WN++IS RN + EA K P +IAS ++ G+ + ++ A ++F+
Sbjct: 226 ERNVVSWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRARELFDE 285
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
M R+V W M+ G + E L F M +G P+ TF L CSDL L G
Sbjct: 286 MPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEG 345
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
+Q+H K V +A++ +YA+CG I A F D+ISWN II A+H
Sbjct: 346 KQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAHH 405
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
G +A+ L+E+M+ ++P+D+T+V +LSACS++GLVD+G F+ M N + R H
Sbjct: 406 GVGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEH 465
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM 534
YTC++DL R G +D+A L++ ++ S +VW ALLG C H N +G +A ++
Sbjct: 466 YTCLIDLCSRAGRLDDAKRLIHYLKIK--PASGSVWSALLGGCNAHGNESIGNLAARNLL 523
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
+ EP+N+G Y +L+ +Y S G+ ++A I ++M G+KK+PGCSWI++ + HVF++ D
Sbjct: 524 QAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPGCSWIEVANKVHVFVARD 583
Query: 595 SSHPKFHRLRYLLNLLH 611
SH + + LL +H
Sbjct: 584 KSHSESDLIYGLLQNIH 600
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 232/458 (50%), Gaps = 51/458 (11%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-PERDMFTYNTVIAGLM 63
R+ +A+ LFD P D V+W ++ Y + G L +A LF++ R++ T+ +++G
Sbjct: 57 RVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDRPDARRNVVTWTALLSGYA 116
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
++ V A+ +F M R+VV+WN+M+ Y G + +A +F MP++D SWN+++
Sbjct: 117 RARLVDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLAT 176
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
LV +D A F M RDV +WT MV+G+ R G++ EAR LFD MP ++V +WN MI
Sbjct: 177 LVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDSMPERNVVSWNAMI 236
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS 243
+GY N + A DLF KM +RD+ S ++ G + ++ + A F +MPE TW +
Sbjct: 237 SGYTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRARELFDEMPERNVVTWTT 296
Query: 244 IISVLIR-----------NGLV---------------------------KEAHSYLEKYP 265
+++ ++ +G++ K+ H + K
Sbjct: 297 MMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEGKQVHQMICKTT 356
Query: 266 YSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
+ A + ++ Y + GE+G A K+F+L +D+ WN +I + +G E + +
Sbjct: 357 FQFDAFVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAILLYE 416
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQI-----HAQAIKIARNQFTTVSNAMITM 379
+M+E+G P++ T+ +L+ CS +D G +I + ++I + +T +I +
Sbjct: 417 KMQENGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTC----LIDL 472
Query: 380 YARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHG 415
+R G + A L+ + + W++++ G HG
Sbjct: 473 CSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHG 510
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 157/330 (47%), Gaps = 54/330 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ + +A+ LF +MP+RD + W M+ G ++G +D A LF+ MPER++ ++N +I+
Sbjct: 178 VRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGKVDEARVLFDSMPERNVVSWNAMIS 237
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ + A ++F M RD+ + N M++G++ N + A +F MP ++VV+W +
Sbjct: 238 GYTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRARELFDEMPERNVVTWTTM 297
Query: 121 IGALVNCQRMDLAESYFKEM-------------GARDVAS-------------------- 147
+ + ++ +LA F M GA D S
Sbjct: 298 MNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEGKQVHQMICKTTF 357
Query: 148 ------WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+ ++N + G I ARKLFD KD+ +WN +IA Y +G A L++K
Sbjct: 358 QFDAFVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAHHGVGIEAILLYEK 417
Query: 202 MHD-----RDLTSWKQLINGLVNSRRIDAAISYFKQMPE-----TCEKTWNSIISVLIRN 251
M + D+T + L++ +S +D + F+ M ++ + +I + R
Sbjct: 418 MQENGYRPNDVT-YVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRA 476
Query: 252 GLVKEAHS---YLEKYPYSNIASWTNVIVG 278
G + +A YL+ P S + W+ ++ G
Sbjct: 477 GRLDDAKRLIHYLKIKPASG-SVWSALLGG 505
>gi|51535392|dbj|BAD37262.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|51535558|dbj|BAD37476.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 908
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/623 (34%), Positives = 336/623 (53%), Gaps = 31/623 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R R A+ LFD +P R VTWN ++ G + A F+ MP RD ++NT++A
Sbjct: 47 LRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAVSWNTLLA 106
Query: 61 GLMQS---DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
S D++ A+ +FD M RDVVTWN+++ Y GL+DEA R+F MP ++ SW
Sbjct: 107 AYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEMPQRNAASW 166
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA---- 173
N ++ ++ A F M A+D AS + MV+G + G + EA +L K +
Sbjct: 167 NTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDM 226
Query: 174 -KDVQAWNLMIAGYLDNGCVGVAEDLF--------------QKMHDRDLTSWKQLINGLV 218
K V A+N +I Y G A+ LF +K +R++ SW ++ +
Sbjct: 227 DKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYI 286
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+ + +A + F +MP+ +WN++IS + +KE+ + P + SW +I G
Sbjct: 287 KAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQG 346
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ + GE A F+ M R WN MI G +N +K F +M E G PD TF
Sbjct: 347 FMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTF 406
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+SVL C+ +P L LG QIH Q ++ + T +SNA+ITMY+RCG + A F +
Sbjct: 407 SSVLAACASIPMLGLGAQIH-QLVEKSFVPDTAISNALITMYSRCGALNDAEAIFKQMHT 465
Query: 399 H-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
D++SWN++I +HG A KAL+LF+ MR P ITFV +LSAC AGLV +GR
Sbjct: 466 KKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRM 525
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP--TVWGALLG 515
FD M ++Y + R HY +V+L+GR G +D+A+ ++N + ++P +VWGA LG
Sbjct: 526 VFDTMVHEYGIVARIEHYAALVNLIGRHGQLDDALEVIN-----SMPMAPDRSVWGAFLG 580
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
AC N + ++A + + + P++S Y+++ ++ G+ A + +M+ G+ K+
Sbjct: 581 ACTAKKNEPLAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQ 640
Query: 576 PGCSWIQINDGGHVFLSGDSSHP 598
PG SWI + HVF+SGD+ HP
Sbjct: 641 PGYSWIDLEGKMHVFISGDTWHP 663
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 196/491 (39%), Gaps = 97/491 (19%)
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
V+ N ++ + G A R+F +P + VV+WN ++ L A +F M
Sbjct: 36 VMRHNRSLAALLRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPV 95
Query: 143 RDVASWTIMV---NGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
RD SW ++ + + AR+LFD+MP +DV WN ++ Y G + A LF
Sbjct: 96 RDAVSWNTLLAAYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLF 155
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
+M R+ SW ++ G + ++ A+ F MP + ++++S +NG++ EA
Sbjct: 156 DEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAEE 215
Query: 260 YLEK-----------------------------------------YPYS---------NI 269
L K Y ++ N+
Sbjct: 216 LLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNV 275
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
SW ++++ Y + G+V SA +F M +D+ WN MI G + +E K F +M
Sbjct: 276 VSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEM--- 332
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
P PD ++ N +I + + G + A
Sbjct: 333 -PDPDTVSW-----------------------------------NLIIQGFMQKGEAEHA 356
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F +P ISWN++I G +G +++LF +M PD TF VL+AC+
Sbjct: 357 RGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASI 416
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
++ G ++ + P +A ++ + R G +++A + ++ VS
Sbjct: 417 PMLGLGAQIHQLVEKSFV--PDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVS--- 471
Query: 510 WGALLGACRIH 520
W AL+G H
Sbjct: 472 WNALIGCYEHH 482
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 193/465 (41%), Gaps = 48/465 (10%)
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
V+ N + AL+ R A F + AR V +W ++ GL R AR+ FD MP
Sbjct: 36 VMRHNRSLAALLRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPV 95
Query: 174 KDVQAWNLMIAGYLDN---GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
+D +WN ++A Y + + A LF +M RD+ +W L+ +D A F
Sbjct: 96 RDAVSWNTLLAAYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLF 155
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+MP+ +WN++++ G V +A + P + AS + ++ G+ + G + A
Sbjct: 156 DEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAE- 214
Query: 291 VFELMTTR--------DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
EL+T R V +N +I G+ + + F + +
Sbjct: 215 --ELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPK-------------- 258
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
G+ H + + N+M+ Y + G++ SA F+ +P D++
Sbjct: 259 -----------GQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLV 307
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
SWN++I G +++ +LF M PD +++ ++ G + R +FD M
Sbjct: 308 SWNTMISGYTQASDMKESEKLFWEMP----DPDTVSWNLIIQGFMQKGEAEHARGFFDRM 363
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
+ + + ++ + G ++ L +++ G + ++L AC
Sbjct: 364 PERGTIS-----WNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPM 418
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ +G + V + ++ + L MY CG DA+ IF QM
Sbjct: 419 LGLGAQIHQLVEKSFVPDTAISNALITMYSRCGALNDAEAIFKQM 463
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/574 (37%), Positives = 317/574 (55%), Gaps = 25/574 (4%)
Query: 53 FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
F+Y ++I +++ + A+ VFD + DV + MI+GY N D AL++F+ MP+K
Sbjct: 12 FSYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVK 71
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
DVVSWN +I +C + +A F EM R V SWT M+NG ++ G+I A LF KMP
Sbjct: 72 DVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMP 131
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+D+ AWN MI GY NG V LFQ+M R++ SW +I GL R + A+ F+Q
Sbjct: 132 FRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQ 191
Query: 233 M------PETCEKTWNSIISVL-----IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFE 281
M + T+ +I+ + G+ AH + Y + S +I Y
Sbjct: 192 MMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYIS-AALITFYAN 250
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
++ +++VF +V +W ++ G G N E+ LK F +M G P+ ++FTS
Sbjct: 251 CKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSA 310
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L C L LD GR+IH A+K+ V N++I MY RCGN+ ++ F + +I
Sbjct: 311 LNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNI 370
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
+SWNS+I G A HG AL F +M + +PD+ITF G+LSACS++G+ +GR F
Sbjct: 371 VSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLF-- 428
Query: 462 MKNKYFLQPRSA-----HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
KYF + +SA HY C+VD+LGR G ++EA L IR ++ + VW LL A
Sbjct: 429 ---KYFSENKSAEVKLDHYACMVDILGRSGKLEEAEEL---IRNMPVKANSMVWLVLLSA 482
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
C +H+ ++V E A + +++LEP+ S Y++L+ +Y S R D RI +MK+ G+ K+P
Sbjct: 483 CTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQP 542
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
G SWI I + FLSGD SHP R+ L L
Sbjct: 543 GRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWL 576
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 223/490 (45%), Gaps = 63/490 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+RN RI EA+ +FDK+ D + +MI GY +N D+A+ LF +MP +D+ ++N++I
Sbjct: 22 LRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIK 81
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ A+++FD M R VV+W +MI+G++ G I+ A +F+ MP +D+ +WN +
Sbjct: 82 GCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSM 141
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA-- 178
I R++ F+EM R+V SWT M+ GL + GR EA LF +M V+
Sbjct: 142 IYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKP 201
Query: 179 -------------------------WNLMIAGYLDNGCVGVA-----------EDLFQKM 202
++ GY + + A ED +
Sbjct: 202 TSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF 261
Query: 203 HDR---DLTSWKQLINGL-VNSRRIDAAISYFKQMPETCEKTWNSIISVLIR-NGLV--- 254
H + ++ W L+ G +N + DA + + M E +S S L GL
Sbjct: 262 HGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALD 321
Query: 255 --KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
+E H+ K +++ ++IV Y+ G + + +F+ ++ +++ WN +I G
Sbjct: 322 WGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCA 381
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
++ G L FF QM S PD TFT +L+ CS GR + + N+
Sbjct: 382 QHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKY---FSENKSAE 438
Query: 372 VS----NAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFER 426
V M+ + R G ++ A ++P+ + + W ++ H LE+ ER
Sbjct: 439 VKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH----SKLEVAER 494
Query: 427 MR--LTDFKP 434
+ D +P
Sbjct: 495 AAKCIIDLEP 504
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 14/223 (6%)
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
C ++ S+I+ +RN + EA + +K + ++ +T +I GY A+++F M
Sbjct: 10 CTFSYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMP 69
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+DV WN MI G + K F +M P ++T+++ L G+
Sbjct: 70 VKDVVSWNSMIKGCFDCADLTMARKLFDEM----PERSVVSWTTMIN-----GFLQFGKI 120
Query: 357 IHAQAIKIARNQFTTVS--NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
A+ + + F ++ N+MI Y G ++ L F +P ++ISW S+I GL H
Sbjct: 121 EVAEGL-FYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQH 179
Query: 415 GYAEKALELFERMR--LTDFKPDDITFVGVLSACSYAGLVDQG 455
G +E+AL LF +M + KP T+ V++AC+ A + QG
Sbjct: 180 GRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQG 222
>gi|297605437|ref|NP_001057211.2| Os06g0228900 [Oryza sativa Japonica Group]
gi|255676854|dbj|BAF19125.2| Os06g0228900 [Oryza sativa Japonica Group]
Length = 695
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/623 (34%), Positives = 336/623 (53%), Gaps = 31/623 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R R A+ LFD +P R VTWN ++ G + A F+ MP RD ++NT++A
Sbjct: 11 LRAGRYGAARRLFDALPARSVVTWNSLLAGLARRPDARAAREFFDAMPVRDAVSWNTLLA 70
Query: 61 GLMQS---DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
S D++ A+ +FD M RDVVTWN+++ Y GL+DEA R+F MP ++ SW
Sbjct: 71 AYSASPHPDHLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEARRLFDEMPQRNAASW 130
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA---- 173
N ++ ++ A F M A+D AS + MV+G + G + EA +L K +
Sbjct: 131 NTMVTGFFAAGQVVKALDVFDAMPAKDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDM 190
Query: 174 -KDVQAWNLMIAGYLDNGCVGVAEDLF--------------QKMHDRDLTSWKQLINGLV 218
K V A+N +I Y G A+ LF +K +R++ SW ++ +
Sbjct: 191 DKAVDAYNTLIVAYGQAGRFSDAKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYI 250
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+ + +A + F +MP+ +WN++IS + +KE+ + P + SW +I G
Sbjct: 251 KAGDVCSARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQG 310
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ + GE A F+ M R WN MI G +N +K F +M E G PD TF
Sbjct: 311 FMQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTF 370
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+SVL C+ +P L LG QIH Q ++ + T +SNA+ITMY+RCG + A F +
Sbjct: 371 SSVLAACASIPMLGLGAQIH-QLVEKSFVPDTAISNALITMYSRCGALNDAEAIFKQMHT 429
Query: 399 H-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
D++SWN++I +HG A KAL+LF+ MR P ITFV +LSAC AGLV +GR
Sbjct: 430 KKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRM 489
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP--TVWGALLG 515
FD M ++Y + R HY +V+L+GR G +D+A+ ++N + ++P +VWGA LG
Sbjct: 490 VFDTMVHEYGIVARIEHYAALVNLIGRHGQLDDALEVIN-----SMPMAPDRSVWGAFLG 544
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
AC N + ++A + + + P++S Y+++ ++ G+ A + +M+ G+ K+
Sbjct: 545 ACTAKKNEPLAQMAAKELSTINPDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQ 604
Query: 576 PGCSWIQINDGGHVFLSGDSSHP 598
PG SWI + HVF+SGD+ HP
Sbjct: 605 PGYSWIDLEGKMHVFISGDTWHP 627
>gi|413952592|gb|AFW85241.1| hypothetical protein ZEAMMB73_384525 [Zea mays]
Length = 683
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/630 (34%), Positives = 337/630 (53%), Gaps = 27/630 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R R A+ LFD +P R VTWN ++ + + A C F+ MP RD+ ++NT+++
Sbjct: 47 LRRGRFSAARRLFDALPARSVVTWNSLLAALSRGSDVRAARCFFDAMPVRDIISWNTLLS 106
Query: 61 GL---MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+Q +++ A+ +F M RD V+W++++ Y GL++EA R+F MP ++ SW
Sbjct: 107 AYARSLQPNDLAAARRLFYEMPQRDAVSWSTLLGAYTRRGLMEEAQRLFDEMPHRNASSW 166
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA---- 173
N +I +M A + F M +D AS + MV+G +R GR+ EA L K
Sbjct: 167 NTMITGFFAVGQMRKALNVFAAMPDKDSASLSAMVSGFIRNGRLHEADDLLTKRLTVMDM 226
Query: 174 -KDVQAWNLMIAGYLDNGCVGVAEDLF------QKMH--------DRDLTSWKQLINGLV 218
K V A+N +IA Y G V A LF Q H +R++ SW ++ +
Sbjct: 227 DKAVGAFNTLIAAYGQTGRVTDARRLFSMIPKTQNQHKGHKRMVFERNVVSWNSMMMCYI 286
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+ + +A + F +MP +WN++I+ + ++EA + P + +W +I G
Sbjct: 287 RTGDVCSARALFDEMPHKDLVSWNTMIAGYTQASEMEEAEKLFWEVPDPDAVTWNLMIRG 346
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ + G+V A F+ M R WN MI G +N+ + +K F +M E G PD+ T
Sbjct: 347 FTQKGDVEHARGFFDRMPERSTITWNTMISGYEQNEDYDSTIKLFQRMLEVGERPDHHTL 406
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+SVL C+ L L LG Q+H Q I+ + T +NA++TMY+RCG + SA F +
Sbjct: 407 SSVLAACASLAMLRLGAQLH-QLIEKSFLPDTATNNALMTMYSRCGELISAKAIFGHMHT 465
Query: 399 H-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
DI+SWN++I G G A +AL LFE MR P ITF+ +LSAC AGLV +GR
Sbjct: 466 QRDIVSWNALIGGYEQQGNATEALRLFEEMRSAKVMPTHITFISLLSACGNAGLVSEGRV 525
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
F M + Y L HY +V+L+GR G +++A+ L I++ I VWGA LGAC
Sbjct: 526 VFHTMVHDYGLAASVEHYAALVNLIGRHGQLEDALEL---IKSMPIAPDRAVWGAFLGAC 582
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
N + E+A + +++P++S Y+++ ++ GR A + M+ G+ K PG
Sbjct: 583 TAKKNEPLAEMAANALSKIDPDSSAPYVLMHNLHAHEGRWGSASLVREDMERLGIHKHPG 642
Query: 578 CSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
SWI ++D HVF+SGD+SHP H + +L
Sbjct: 643 YSWIDLHDKVHVFISGDTSHPLTHEIFSVL 672
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 169/440 (38%), Gaps = 60/440 (13%)
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
V+ N + G L G A LF + R + +W L+ L + AA +F MP
Sbjct: 36 VRQHNRSLVGLLRRGRFSAARRLFDALPARSVVTWNSLLAALSRGSDVRAARCFFDAMPV 95
Query: 236 TCEKTWNSIISVLIRN----------------------------------GLVKEAHSYL 261
+WN+++S R+ GL++EA
Sbjct: 96 RDIISWNTLLSAYARSLQPNDLAAARRLFYEMPQRDAVSWSTLLGAYTRRGLMEEAQRLF 155
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN-------D 314
++ P+ N +SW +I G+F +G++ A+ VF M +D + M+ G N D
Sbjct: 156 DEMPHRNASSWNTMITGFFAVGQMRKALNVFAAMPDKDSASLSAMVSGFIRNGRLHEADD 215
Query: 315 LGEEGLKFFVQMKESG-------PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
L + L K G T + S +P + H + + RN
Sbjct: 216 LLTKRLTVMDMDKAVGAFNTLIAAYGQTGRVTDARRLFSMIPKTQNQHKGHKRMV-FERN 274
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
+ N+M+ Y R G++ SA F +P D++SWN++I G E+A +LF +
Sbjct: 275 VVSW--NSMMMCYIRTGDVCSARALFDEMPHKDLVSWNTMIAGYTQASEMEEAEKLFWEV 332
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
PD +T+ ++ + G V+ R +FD M + + + ++ +
Sbjct: 333 P----DPDAVTWNLMIRGFTQKGDVEHARGFFDRMPERSTIT-----WNTMISGYEQNED 383
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLIL 547
D + L + G ++L AC +++G + + + ++ L
Sbjct: 384 YDSTIKLFQRMLEVGERPDHHTLSSVLAACASLAMLRLGAQLHQLIEKSFLPDTATNNAL 443
Query: 548 TEMYLSCGRREDAKRIFAQM 567
MY CG AK IF M
Sbjct: 444 MTMYSRCGELISAKAIFGHM 463
>gi|125550574|gb|EAY96283.1| hypothetical protein OsI_18181 [Oryza sativa Indica Group]
Length = 661
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/569 (34%), Positives = 325/569 (57%), Gaps = 8/569 (1%)
Query: 43 LFNQMPERD-MFTYNTVIAGLMQSDNVQGAKEVFDGM--EVRDVVTWNSMISGYVCNGLI 99
+F+ MP RD Y ++ + ++ A+ ++ + R + M+ GYV G +
Sbjct: 80 MFDGMPRRDDAVAYAAMVGIHLWDRDLPHAEALYRAAPPDCRGIHLDTVMLDGYVKAGQV 139
Query: 100 DEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREG 159
D A R+F GM +K+VV+W ++ +D A F M R+V SWT MV G G
Sbjct: 140 DRARRLFDGMAVKNVVAWTCMVSGYCRAGLVDEARRLFDLMPYRNVFSWTTMVQGYAHNG 199
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
+ EAR++FDKMP ++V AW +M+ Y+DNGC+ A +LF +M + SW + GL++
Sbjct: 200 MLREAREMFDKMPERNVVAWTVMVKAYVDNGCIQEALELFNRMPQMNSYSWNAMATGLMS 259
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
+ ++D A+ F +MP +W +++ L +NG V A + ++ P +I +W ++I Y
Sbjct: 260 AGKVDDAVQLFDKMPHKNVVSWTIMVTGLAQNGFVSRAREFFDRMPKKDIPAWNSMITAY 319
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
G+V A ++F++M ++++ WN++I G N+L +E L+ F+ M S SPD+ T
Sbjct: 320 TNDGQVNDAQRLFDIMPSKNLVTWNIIIDGYSMNNLKDEALRLFLLMLRSAVSPDSTTLI 379
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
SVL + T+++ RQIH + K+ T + N +++MY+R G++ SA L F +
Sbjct: 380 SVLVVSES--TMEV-RQIHGLSTKLGYQPETNLGNTLVSMYSRSGDLSSAWLAFRRLNEK 436
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
D I+W S+I LA HG A AL+ F +M +KP TF VLSAC++ GLV++GR F
Sbjct: 437 DAITWTSMIQALANHGCAPCALQGFAQMLRCGYKPSSTTFTAVLSACNHVGLVEKGRKIF 496
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
+ + Y L+P HY+C+VDLLGR G + EA +++ ++ D + + + G LLG+C
Sbjct: 497 KSISHVYGLEPTIEHYSCLVDLLGRAGYVREAKEVVDGMQRDMCDEA--ILGTLLGSCMT 554
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
HN ++VG GE +++++P+ SG Y +L ++ S G + ++ MK + VKK PG S
Sbjct: 555 HNEVEVGRAVGEDLVKIDPSGSGGYTLLANVFASGGMWNEVASVWKIMKGSKVKKTPGFS 614
Query: 580 WIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
I++N HVF S D H + + +LN
Sbjct: 615 QIEVNARNHVFYSRDQMHSQRTEIYEMLN 643
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 196/362 (54%), Gaps = 5/362 (1%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ ++ A+ LFD M ++ V W M+ GY + G +D A LF+ MP R++F++ T++
Sbjct: 134 VKAGQVDRARRLFDGMAVKNVVAWTCMVSGYCRAGLVDEARRLFDLMPYRNVFSWTTMVQ 193
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G + ++ A+E+FD M R+VV W M+ YV NG I EAL +F+ MP + SWN +
Sbjct: 194 GYAHNGMLREAREMFDKMPERNVVAWTVMVKAYVDNGCIQEALELFNRMPQMNSYSWNAM 253
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
L++ ++D A F +M ++V SWTIMV GL + G + AR+ FD+MP KD+ AWN
Sbjct: 254 ATGLMSAGKVDDAVQLFDKMPHKNVVSWTIMVTGLAQNGFVSRAREFFDRMPKKDIPAWN 313
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-EK 239
MI Y ++G V A+ LF M ++L +W +I+G + D A+ F M +
Sbjct: 314 SMITAYTNDGQVNDAQRLFDIMPSKNLVTWNIIIDGYSMNNLKDEALRLFLLMLRSAVSP 373
Query: 240 TWNSIISVLIRNGL---VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELM 295
++ISVL+ + V++ H K Y + N +V Y G++ SA F +
Sbjct: 374 DSTTLISVLVVSESTMEVRQIHGLSTKLGYQPETNLGNTLVSMYSRSGDLSSAWLAFRRL 433
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+D W MI L + L+ F QM G P + TFT+VL+ C+ + ++ GR
Sbjct: 434 NEKDAITWTSMIQALANHGCAPCALQGFAQMLRCGYKPSSTTFTAVLSACNHVGLVEKGR 493
Query: 356 QI 357
+I
Sbjct: 494 KI 495
>gi|356546772|ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Glycine max]
Length = 713
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/657 (33%), Positives = 364/657 (55%), Gaps = 46/657 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
RN ++EA+++F KMP ++T +W M+ + +NG + NA LF++MP+R + N +I+
Sbjct: 53 RNGNVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDEMPQRTTVSNNAMISA 112
Query: 62 LMQSD-NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWN 118
+++ NV A E+F + R++V++ +MI G+V G A +++ P +D N
Sbjct: 113 YIRNGCNVGKAYELFSVLAERNLVSYAAMIMGFVKAGKFHMAEKLYRETPYEFRDPACSN 172
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+I + ++ A F+ MG RDV SW+ MV+GL R+GR+ AR LFD+MP ++V +
Sbjct: 173 ALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAAARDLFDRMPDRNVVS 232
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLT--------------------SWKQLINGLV 218
W+ MI GY+ G LF M L S I+GLV
Sbjct: 233 WSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGRMSEGMQIHGLV 292
Query: 219 N----------SRRI----------DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
+ S + D A F + + TWNS+IS I N V+ A+
Sbjct: 293 SRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISGYIHNNEVEAAY 352
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
+ P ++ SWT +I G+ + G V +AI++F ++ +D VW +I G N+ EE
Sbjct: 353 RVFGRMPVKDVISWTAMIAGFSKSGRVENAIELFNMLPAKDDFVWTAIISGFVNNNEYEE 412
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L ++ +M G P+ T +SVL + L L+ G QIH +K+ ++ N++I+
Sbjct: 413 ALHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTCILKMNLEYNLSIQNSLIS 472
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
Y++ GN+ A F V ++IS+NSII G A +G+ ++AL ++++M+ +P+ +T
Sbjct: 473 FYSKSGNVVDAYRIFLDVIEPNVISYNSIISGFAQNGFGDEALGIYKKMQSEGHEPNHVT 532
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
F+ VLSAC++AGLVD+G F+ MK+ Y ++P + HY C+VD+LGR GL+DEA++L I
Sbjct: 533 FLAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEADHYACMVDILGRAGLLDEAIDL---I 589
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
R+ + VWGA+LGA + H + + ++A +R+ +LEP N+ Y++L+ MY + G++
Sbjct: 590 RSMPFKPHSGVWGAILGASKTHLRLDLAKLAAQRITDLEPKNATPYVVLSNMYSAAGKKI 649
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
D + G+KK PGCSWI + + H+FL+GD SH ++ + + E++
Sbjct: 650 DGDLVKMAKNLKGIKKSPGCSWITMKNKVHLFLAGDQSHGSIEEIKTTILTMDREMQ 706
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 181/390 (46%), Gaps = 45/390 (11%)
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
++ N+ I+ NG + EA +FH MP+K+ SW
Sbjct: 41 LIQCNTQIAENGRNGNVKEAESIFHKMPIKNTASW------------------------- 75
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC-VGVAEDLFQK 201
T M+ + G+I AR+LFD+MP + + N MI+ Y+ NGC VG A +LF
Sbjct: 76 ------TAMLTAFAQNGQIQNARRLFDEMPQRTTVSNNAMISAYIRNGCNVGKAYELFSV 129
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLIRNGLVKE 256
+ +R+L S+ +I G V + + A +++ P C N++I+ ++ G V E
Sbjct: 130 LAERNLVSYAAMIMGFVKAGKFHMAEKLYRETPYEFRDPACS---NALINGYLKMGEVNE 186
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
A E ++ SW+ ++ G G V +A +F+ M R+V W+ MI G
Sbjct: 187 ALRIFENMGERDVVSWSAMVDGLCRDGRVAAARDLFDRMPDRNVVSWSAMIDGYMGEGFF 246
Query: 317 EEGLKFFVQMKESGPSPDNA-TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
+EG F+ MK G N+ T T + C + + G QIH ++ +SN+
Sbjct: 247 QEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGRMSEGMQIHGLVSRLGFEFDNVLSNS 306
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
+ITMY+ G A F +V DI++WNS+I G ++ E A +F RM + D
Sbjct: 307 VITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISGYIHNNEVEAAYRVFGRMPVKDV--- 363
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNK 465
I++ +++ S +G V+ F+ + K
Sbjct: 364 -ISWTAMIAGFSKSGRVENAIELFNMLPAK 392
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 223/471 (47%), Gaps = 37/471 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ + EA +F+ M +RD V+W+ M+ G ++G + A LF++MP+R++ +++ +I
Sbjct: 179 LKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAAARDLFDRMPDRNVVSWSAMID 238
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNS-----MISGYVCNGLIDEALRVFHGMPLK--- 112
G M Q +F M+ +V NS M G + E +++ HG+ +
Sbjct: 239 GYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGRMSEGMQI-HGLVSRLGF 297
Query: 113 --DVVSWNLVIG--ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
D V N VI +++ C D+A+ F + +D+ +W +++G + + A ++F
Sbjct: 298 EFDNVLSNSVITMYSMLGCT--DMADKVFCTVSDKDIVTWNSLISGYIHNNEVEAAYRVF 355
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+MP KDV +W MIAG+ +G V A +LF + +D W +I+G VN+ + A+
Sbjct: 356 GRMPVKDVISWTAMIAGFSKSGRVENAIELFNMLPAKDDFVWTAIISGFVNNNEYEEALH 415
Query: 229 YFKQM--------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
++ +M P T + +++ N ++ L+ N++ ++I Y
Sbjct: 416 WYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTCILKMNLEYNLSIQNSLISFYS 475
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G V A ++F + +V +N +I G +N G+E L + +M+ G P++ TF +
Sbjct: 476 KSGNVVDAYRIFLDVIEPNVISYNSIISGFAQNGFGDEALGIYKKMQSEGHEPNHVTFLA 535
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA-----MITMYARCGNIQSALLEFSS 395
VL+ C+ +D G I ++ + A M+ + R G + A+ S
Sbjct: 536 VLSACTHAGLVDEGWNI----FNTMKSHYGIEPEADHYACMVDILGRAGLLDEAIDLIRS 591
Query: 396 VPI--HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+P H + W +I+ H + L R+TD +P + T VLS
Sbjct: 592 MPFKPHSGV-WGAILGASKTHLRLD--LAKLAAQRITDLEPKNATPYVVLS 639
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 183/417 (43%), Gaps = 66/417 (15%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
NT IA ++ NV+ A+ +F M +++ +W +M++ + NG I A R+F MP + V
Sbjct: 45 NTQIAENGRNGNVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDEMPQRTTV 104
Query: 116 SWNLVIGALV-NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA- 173
S N +I A + N + A F + R++ S+ M+ G V+ G+ A KL+ + P
Sbjct: 105 SNNAMISAYIRNGCNVGKAYELFSVLAERNLVSYAAMIMGFVKAGKFHMAEKLYRETPYE 164
Query: 174 -KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+D N +I GYL G V A +F+ M +RD+ SW +++GL R+ AA F +
Sbjct: 165 FRDPACSNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAAARDLFDR 224
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
MP+ N+ SW+ +I GY G +F
Sbjct: 225 MPD-------------------------------RNVVSWSAMIDGYMGEGFFQEGFCLF 253
Query: 293 -----ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
E + + T +M G EG++ + G DN SV+T+ S
Sbjct: 254 MDMKREGLVEVNSTTMTIMFKACGNCGRMSEGMQIHGLVSRLGFEFDNVLSNSVITMYSM 313
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVS-------NAMITMYARCGNIQSALLEFSSVPIHD 400
L D+ ++ F TVS N++I+ Y +++A F +P+ D
Sbjct: 314 LGCTDMADKV-----------FCTVSDKDIVTWNSLISGYIHNNEVEAAYRVFGRMPVKD 362
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ISW ++I G + G E A+ELF + DD + ++S G V+ Y
Sbjct: 363 VISWTAMIAGFSKSGRVENAIELFNMLP----AKDDFVWTAIIS-----GFVNNNEY 410
>gi|115461705|ref|NP_001054452.1| Os05g0112900 [Oryza sativa Japonica Group]
gi|45680436|gb|AAS75237.1| unknown protein [Oryza sativa Japonica Group]
gi|113578003|dbj|BAF16366.1| Os05g0112900 [Oryza sativa Japonica Group]
gi|215715346|dbj|BAG95097.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736909|dbj|BAG95838.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629956|gb|EEE62088.1| hypothetical protein OsJ_16872 [Oryza sativa Japonica Group]
Length = 661
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/569 (34%), Positives = 324/569 (56%), Gaps = 8/569 (1%)
Query: 43 LFNQMPERD-MFTYNTVIAGLMQSDNVQGAKEVFDGM--EVRDVVTWNSMISGYVCNGLI 99
+F+ MP RD Y ++ + ++ A+ ++ + R + M+ GYV G +
Sbjct: 80 MFDGMPRRDDAVAYAAMVGIHLWDRDLPHAEALYRAAPPDCRGIHLDTVMLDGYVKAGQV 139
Query: 100 DEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREG 159
D A R+F GM +K+VV+W ++ +D A F M R+V SWT MV G G
Sbjct: 140 DRARRLFDGMAVKNVVAWTCMVSGYCRAGLVDEARRLFDLMPYRNVFSWTTMVQGYAHNG 199
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
+ EAR++FDKMP ++V AW +M+ Y+DNGC+ A +LF +M + SW + GL++
Sbjct: 200 MLREAREMFDKMPERNVVAWTVMVKAYVDNGCIQEALELFNRMPQMNSYSWNAMATGLMS 259
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
+ ++D A+ F +MP +W +++ L +NG V A + ++ P +I +W ++I Y
Sbjct: 260 AGKVDDAVQLFDKMPHKNVVSWTIMVTGLAQNGFVSRAREFFDRMPKKDIPAWNSMITAY 319
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
G+V A ++F++M ++++ WN++I G N+L +E L+ F+ M S SPD+ T
Sbjct: 320 TNDGQVNDAQRLFDIMPSKNLVTWNIIIDGYSMNNLKDEALRLFLLMLRSAVSPDSTTLI 379
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
SVL + T+++ RQIH + K+ T + N +++MY+R G++ SA L F +
Sbjct: 380 SVLVVSES--TMEV-RQIHGLSTKLGYQPETNLGNTLVSMYSRSGDLSSAWLAFRRLNEK 436
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
D I+W S+I LA HG A AL+ F +M +KP TF VLSAC++ GLV++GR F
Sbjct: 437 DAITWTSMIQALANHGCAPCALQGFAQMLRCGYKPSSTTFTAVLSACNHVGLVEKGRKIF 496
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
+ + Y L P HY+C+VDLLGR G + EA +++ ++ D + + + G LLG+C
Sbjct: 497 KSISHVYGLGPTIEHYSCLVDLLGRAGYVREAKEVVDGMQRDMCDEA--ILGTLLGSCMT 554
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
HN ++VG GE +++++P+ SG Y +L ++ S G + ++ MK + VKK PG S
Sbjct: 555 HNEVEVGRAVGEDLVKIDPSGSGGYTLLANVFASGGMWNEVASVWKIMKGSKVKKTPGFS 614
Query: 580 WIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
I++N HVF S D H + + +LN
Sbjct: 615 QIEVNARNHVFYSRDQMHSQRTEIYEMLN 643
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 196/362 (54%), Gaps = 5/362 (1%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ ++ A+ LFD M ++ V W M+ GY + G +D A LF+ MP R++F++ T++
Sbjct: 134 VKAGQVDRARRLFDGMAVKNVVAWTCMVSGYCRAGLVDEARRLFDLMPYRNVFSWTTMVQ 193
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G + ++ A+E+FD M R+VV W M+ YV NG I EAL +F+ MP + SWN +
Sbjct: 194 GYAHNGMLREAREMFDKMPERNVVAWTVMVKAYVDNGCIQEALELFNRMPQMNSYSWNAM 253
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
L++ ++D A F +M ++V SWTIMV GL + G + AR+ FD+MP KD+ AWN
Sbjct: 254 ATGLMSAGKVDDAVQLFDKMPHKNVVSWTIMVTGLAQNGFVSRAREFFDRMPKKDIPAWN 313
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-EK 239
MI Y ++G V A+ LF M ++L +W +I+G + D A+ F M +
Sbjct: 314 SMITAYTNDGQVNDAQRLFDIMPSKNLVTWNIIIDGYSMNNLKDEALRLFLLMLRSAVSP 373
Query: 240 TWNSIISVLIRNGL---VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELM 295
++ISVL+ + V++ H K Y + N +V Y G++ SA F +
Sbjct: 374 DSTTLISVLVVSESTMEVRQIHGLSTKLGYQPETNLGNTLVSMYSRSGDLSSAWLAFRRL 433
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+D W MI L + L+ F QM G P + TFT+VL+ C+ + ++ GR
Sbjct: 434 NEKDAITWTSMIQALANHGCAPCALQGFAQMLRCGYKPSSTTFTAVLSACNHVGLVEKGR 493
Query: 356 QI 357
+I
Sbjct: 494 KI 495
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 224/641 (34%), Positives = 339/641 (52%), Gaps = 38/641 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTVIAGLM 63
I A+ LFDK+P+ D V M+ Y G + A LFN P RD +YN +I
Sbjct: 47 IPYARYLFDKIPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFS 106
Query: 64 QSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-DVVSWN 118
S + A ++F M+ V D T++S++ + + H K +S
Sbjct: 107 HSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVP 166
Query: 119 LVIGALVNCQ-------------RMDLAESYFKEM--GARDVASWTIMVNGLVREGRIVE 163
V+ AL++C M A F E G RD +WT ++ G VR +V
Sbjct: 167 SVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVA 226
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVN 219
AR+L + M AWN MI+GY+ G A DL ++MH D ++ +I+ N
Sbjct: 227 ARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASN 286
Query: 220 S------RRIDAAISYFKQMPET--CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
+ R++ A + P N++I++ R G + EA +K P ++ S
Sbjct: 287 AGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVS 346
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
W ++ G + A +F M R + W VMI GL +N GEEGLK F QMK G
Sbjct: 347 WNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGL 406
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
P + + + CS L +LD G+Q+H+Q I++ + +V NA+ITMY+RCG +++A
Sbjct: 407 EPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADT 466
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F ++P D +SWN++I LA HG+ +A++L+E+M D PD ITF+ +LSACS+AGL
Sbjct: 467 VFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGL 526
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
V +GR+YFD M+ Y + P HY+ ++DLL R G+ EA N+ + E +W
Sbjct: 527 VKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESM---PFEPGAPIWE 583
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
ALL C IH N+++G A +R++EL P G Y+ L+ MY + G+ ++ R+ M+E G
Sbjct: 584 ALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERG 643
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL-RYLLNLLH 611
VKKEPGCSWI++ + HVFL D+ HP+ H + RYL L+H
Sbjct: 644 VKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQLVH 684
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 164/394 (41%), Gaps = 88/394 (22%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ--KMHDRDLT 208
+++ + I AR LFDK+P D+ A M++ Y G + +A LF M RD
Sbjct: 37 LIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTV 96
Query: 209 SWKQLINGLVNSRRIDAAISYFKQM--------PET----------------------CE 238
S+ +I +S AA+ F QM P T CE
Sbjct: 97 SYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCE 156
Query: 239 ----------KTWNSIISVLIRNG---------LVKEAHSYLEKYP--YSNIASWTNVIV 277
N+++S + L+ A ++ P + +WT +I
Sbjct: 157 VFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIA 216
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
GY ++ +A ++ E MT WN MI G EE +M G D T
Sbjct: 217 GYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYT 276
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIA---RNQFT-TVSNAMITMYARCGNIQSALLEF 393
+TSV++ S+ ++GRQ+HA ++ F +V+NA+IT+Y RCG + A F
Sbjct: 277 YTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVF 336
Query: 394 SSVPIHDIISWNSI-------------------------------ICGLAYHGYAEKALE 422
+P+ D++SWN+I I GLA +G+ E+ L+
Sbjct: 337 DKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLK 396
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
LF +M+L +P D + G +++CS G +D G+
Sbjct: 397 LFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQ 430
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 195/453 (43%), Gaps = 92/453 (20%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
+RN + A+ L + M V WN MI GY GF + A L +M + D +TY
Sbjct: 219 VRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYT 278
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVTW---------NSMISGYVCNGLIDEALRVFH 107
+VI+ + ++V +R VV N++I+ Y G + EA RVF
Sbjct: 279 SVISAASNAGLFNIGRQV-HAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFD 337
Query: 108 GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
MP+KD+VSWN ++ VN +R++ A S F+EM R + +WT+M++GL + G E KL
Sbjct: 338 KMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKL 397
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
F++M + ++ + AG + + V + D Q++H + + QL + D+++
Sbjct: 398 FNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQII----QLGH--------DSSL 445
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGS 287
S N++I++ R GLV+ A + PY + SW +I + G
Sbjct: 446 S-----------VGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQ 494
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
AI+++E M D+ PD TF ++L+ CS
Sbjct: 495 AIQLYEKMLKEDIL-------------------------------PDRITFLTILSACS- 522
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVS------------NAMITMYARCGNIQSALLEFSS 395
HA +K R+ F T+ + +I + R G A S
Sbjct: 523 ----------HAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTES 572
Query: 396 VPIHDIIS-WNSIICGLAYHGYAEKALELFERM 427
+P W +++ G HG E ++ +R+
Sbjct: 573 MPFEPGAPIWEALLAGCWIHGNMELGIQAADRL 605
>gi|357482291|ref|XP_003611431.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512766|gb|AES94389.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 735
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/646 (34%), Positives = 353/646 (54%), Gaps = 52/646 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
++ +++A+NLFD MP R+ VT+N M+ Y ++G A F+ MPER++ ++ +++G
Sbjct: 84 KHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDDMPERNVVSWTAMLSG 143
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ A++VFD M R+VV+WNSM+ G + NG ++EA +VF P K+VVSWN +I
Sbjct: 144 YAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMI 203
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
V RMD A+ F ++ R+V +WT M++G R G + EA +LF MP K+V +W
Sbjct: 204 EGYVENGRMDDAKDLFDQIECRNVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTA 263
Query: 182 MIAGYLDNG-------------------------------CVGVA-EDLFQKMHDR-DLT 208
MI G+ NG C G+ L +++H + L
Sbjct: 264 MIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILN 323
Query: 209 SWK------QLINGLVNSRRI----DAAISYFKQMPETC-EKTWNSIISVLIRNGLVKEA 257
WK +L LV + D+A S F+ + C ++++NS+I+ ++ G + +A
Sbjct: 324 RWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDDQSFNSMINGYVQAGQLHKA 383
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM--TTRDVTVWNVMIFGLGENDL 315
+ P N +WT +I GY G+V A +F+ M + +D W +MI+G +N+L
Sbjct: 384 QELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMPDSDKDSIAWTLMIYGYVQNEL 443
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK-IARNQFTT-VS 373
E + F +M G SP N+T+ + + LDLG Q+HA +K I ++ +
Sbjct: 444 IAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLE 503
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
N++I+MYA+CG I+ A FS++ D ISWNS+I GL+ HG A +AL ++E M
Sbjct: 504 NSLISMYAKCGEIEDAYRIFSNMNCRDKISWNSMIMGLSDHGRANEALNMYETMLEFGVY 563
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
PD +TF+GVL+AC++AG VD+G F M N Y LQP HY ++++LGR G + +A
Sbjct: 564 PDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGLEHYVSIINILGRAGRVKDAEE 623
Query: 494 LLNEIRADGIEVSPTVWGALLGACRI-HNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
+ + +E + T+WGAL+G C + + + A R++EL+P N+ ++ L +Y
Sbjct: 624 FVLRL---PVEPNHTIWGALIGVCGLSKTDADIARRAATRLLELDPLNAPGHVTLCNIYA 680
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+ R + + +M+ GV+K PGCSWI + H F SGD P
Sbjct: 681 ANDRHLEETSLRREMRMKGVRKAPGCSWILVKGKVHAFSSGDRLDP 726
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 240/493 (48%), Gaps = 21/493 (4%)
Query: 88 SMISGYVCNGLIDEALRVFHGMPLKD----VVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
S + Y+ NG + EA + H P + VV W ++ ++ A + F M R
Sbjct: 42 SQLLHYLTNGFLHEARTILHSFPSGNIHSRVVHWTSMLTNYAKHGYVEQARNLFDIMPHR 101
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
++ ++ M++ ++ G +A++ FD MP ++V +W M++GY G + A +F +M
Sbjct: 102 NIVTYNAMLSAYLQSGMTRQAKRFFDDMPERNVVSWTAMLSGYAGLGWIDDARKVFDEMP 161
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEK 263
+R++ SW ++ GL+ + ++ A F P+ +WN++I + NG + +A ++
Sbjct: 162 ERNVVSWNSMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQ 221
Query: 264 YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
N+ +WT++I GY +G+V A ++F++M ++V W MI G N E L F
Sbjct: 222 IECRNVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLF 281
Query: 324 VQMKE-SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF----TTVSNAMIT 378
+ M S P+ TF S++ C+ + LG+Q+HAQ I + R + + +++
Sbjct: 282 LDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMI-LNRWKLDDYDCRLGRSLVR 340
Query: 379 MYARCGNIQSALLEFS-SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
MY+ CG + SA F + D S+NS+I G G KA ELF+ + + + I
Sbjct: 341 MYSVCGLMDSARSVFEGDMKNCDDQSFNSMINGYVQAGQLHKAQELFDTVPIR----NKI 396
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
+ ++S AG V + FD M + S +T ++ + LI EA+NL E
Sbjct: 397 AWTCMISGYLSAGQVLKASNLFDDMPDS---DKDSIAWTLMIYGYVQNELIAEAINLFAE 453
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYL--ILTEMYLSC 554
+ A G + + L GA + +G ++ ++ + VYL L MY C
Sbjct: 454 MMAQGASPINSTYAVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKC 513
Query: 555 GRREDAKRIFAQM 567
G EDA RIF+ M
Sbjct: 514 GEIEDAYRIFSNM 526
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/656 (34%), Positives = 347/656 (52%), Gaps = 47/656 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTVI 59
+++ I A+ LFDK+P+ D V ++ Y +G + A LFN P RD +YN +I
Sbjct: 52 KSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMI 111
Query: 60 AGLMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYV--------CNGLIDEALRVFH 107
++ A +F M+ + D T++S++S C L E +++
Sbjct: 112 TAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKL-- 169
Query: 108 GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV-----------ASWTIMVNGLV 156
G L V+ N ++ V C L +S AR V SWT M+ G V
Sbjct: 170 GTLLIPSVT-NALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYV 228
Query: 157 REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD----RDLTSWKQ 212
R +V AR+L D + AWN MI+GY+ G A D F++MH D ++
Sbjct: 229 RNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTS 288
Query: 213 LIN---------GLVN-SRRIDAAI--SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
LI+ G+ N R++ I + + N++I+ + + EA
Sbjct: 289 LISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRV 348
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+K P +I SW V+ GY + A +F M R+V W VMI GL +N GEEGL
Sbjct: 349 FDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGL 408
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
K F QMK G P + F +T CS L +LD G+QIH+Q I++ + + NA+ITMY
Sbjct: 409 KLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMY 468
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+RCG ++SA F ++P D +SWN++I LA HG+ KA+ELFE+M D PD ITF+
Sbjct: 469 SRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFL 528
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
+L+AC++AGL+ +GR+YFD M +Y + P HY ++DLL R G+ +A ++ I++
Sbjct: 529 TILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSV---IKS 585
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
E +W ALL CRIH N+++G A +R++EL P G Y+IL+ MY + G+ ++
Sbjct: 586 MPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEV 645
Query: 561 KRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
R+ M+E GVKKEPGCSW+++ + HVFL D+ HP+ + L L E+++
Sbjct: 646 ARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKK 701
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 189/466 (40%), Gaps = 114/466 (24%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
+RN + A+ L D + V WN MI GY + G + A F +M + D +TY
Sbjct: 228 VRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYT 287
Query: 57 TVIAGLMQSDNVQG----AKEVFDGMEVRDVV---------TWNSMISGYVCNGLIDEAL 103
++I+ + G ++V G +R VV N++I+ Y + EA
Sbjct: 288 SLISACGSCNEKMGMFNCGRQV-HGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEAR 346
Query: 104 RVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVE 163
RVF MP++D++SWN V+ VN QR++ A S F EM R+V +WT+M++GL + G E
Sbjct: 347 RVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEE 406
Query: 164 ARKLFDKMPAKDVQAWNLMIA---------GYLDNGCVGVAEDLFQKMHDRDLTSWKQLI 214
KLF++M ++ ++ + A G LDNG + + + HD L++ LI
Sbjct: 407 GLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNG-QQIHSQVIRLGHDSGLSAGNALI 465
Query: 215 NGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTN 274
+++A S F MP +WN++I+ L ++G H
Sbjct: 466 TMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHG-----HGV-------------- 506
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
AI++FE M D+ PD
Sbjct: 507 ------------KAIELFEQMMKEDIL-------------------------------PD 523
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN------------AMITMYAR 382
TF ++LT C+ HA IK R+ F T+ +I + R
Sbjct: 524 RITFLTILTACN-----------HAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCR 572
Query: 383 CGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELFERM 427
G A S+P W +++ G HG E ++ +R+
Sbjct: 573 AGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRL 618
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 166/398 (41%), Gaps = 92/398 (23%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ--KMHDRDLT 208
++N + I ARKLFDK+P D+ A +++ Y +G V +A+ LF + RD
Sbjct: 46 LINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTV 105
Query: 209 SWKQLINGLVNSRRIDAAISYFKQM--------PET----------------------CE 238
S+ +I + AA++ F QM P T CE
Sbjct: 106 SYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCE 165
Query: 239 ----------KTWNSIISVLI---------RNGLVKEAHSYLEKYPYSNI--ASWTNVIV 277
N+++S + + L+ A ++ P + I SWT +I
Sbjct: 166 VIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIA 225
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
GY ++ +A ++ + +T WN MI G L EE F +M G D T
Sbjct: 226 GYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYT 285
Query: 338 FTSVLTICSD----LPTLDLGRQIHA----QAIKIARNQFTTVSNAMITMYARCGNIQSA 389
+TS+++ C + + GRQ+H ++ + + +V+NA+IT Y + + A
Sbjct: 286 YTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEA 345
Query: 390 LLEFSSVPIHDIISWNSI-------------------------------ICGLAYHGYAE 418
F +P+ DIISWN++ I GLA +G+ E
Sbjct: 346 RRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGE 405
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+ L+LF +M+ +P D F G ++ACS G +D G+
Sbjct: 406 EGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQ 443
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 170/425 (40%), Gaps = 69/425 (16%)
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
R LT + + +R + A I P T N +I++ ++ + A +K
Sbjct: 9 RYLTQLNHVSTTQIIARAVHAHILTSGFKPNTF--ILNRLINIYCKSSNITYARKLFDKI 66
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFEL--MTTRDVTVWNVMIFGLGENDLGEEGLKF 322
P +I + T ++ Y G V A ++F +T RD +N MI + G L
Sbjct: 67 PKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNL 126
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ-IHAQAIKIARNQFTTVSNAMITMYA 381
FVQMK G PD TF+SVL+ S + + Q +H + IK+ +V+NA+++ Y
Sbjct: 127 FVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYV 186
Query: 382 RCGN---------IQSALLEFSSVPIHDI------------------------------- 401
C + + SA F P + I
Sbjct: 187 CCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYP 246
Query: 402 --ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
++WN++I G G E+A + F RM + D+ T+ ++SAC G ++ F
Sbjct: 247 IDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISAC---GSCNEKMGMF 303
Query: 460 DCMKN------KYFLQPRSAHYT-----CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
+C + + ++P S H+ ++ ++ + EA + +++ I
Sbjct: 304 NCGRQVHGYILRTVVEP-SHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDI----I 358
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
W A+L + N + E A E+ N + ++ G E+ ++F QMK
Sbjct: 359 SWNAVLSG---YVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMK 415
Query: 569 ENGVK 573
G++
Sbjct: 416 SEGLE 420
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/499 (37%), Positives = 289/499 (57%), Gaps = 3/499 (0%)
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
MP +D VSWN +I D ++ F M ++V SW M+ G + + RI EA + F
Sbjct: 1 MPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYF 60
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
MP ++ +WN MI+G + V A LF++M R++ S+ +++G I+ A +
Sbjct: 61 QAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARA 120
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
F MP+ +W +IS + NG EA + E+ P NI + T +I GY + G+ A
Sbjct: 121 LFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKA 180
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+F+ + RD+ WN MI G +N GEE LK QM + G PD++T SVLT CS L
Sbjct: 181 KILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSL 240
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
+L GR+ H +K ++ NA+ITMY +CG+I + L F + D++SWN++I
Sbjct: 241 ASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMI 300
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
A HG+ ++AL F MR +PD ITF+ +LSAC +AG V + +F+ M Y +
Sbjct: 301 AAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKI 360
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
PR H+ C+VD+L R G +++A ++ E+ E +WGALL AC +H N+K+GE+
Sbjct: 361 VPRPEHFACLVDILSRGGQVEKAYKIIQEM---PFEADCGIWGALLAACHVHLNVKLGEL 417
Query: 529 AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGH 588
A ++++ELEP NSG Y++L+ +Y + G + R+ M+E GVKK+P SW++I++ H
Sbjct: 418 AAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVH 477
Query: 589 VFLSGDSSHPKFHRLRYLL 607
FL D+SHP+ HR+R L
Sbjct: 478 FFLGDDASHPEIHRIRLEL 496
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 141/504 (27%), Positives = 238/504 (47%), Gaps = 49/504 (9%)
Query: 16 MPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF 75
MP RDTV+WN +I GY+KNG D + LF MP +++ ++N++IAG ++ + + A + F
Sbjct: 1 MPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYF 60
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAES 135
M R+ +WN+MISG V ++EA R+F MP ++V+S+ ++ ++ A +
Sbjct: 61 QAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARA 120
Query: 136 YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
F M ++V SWT+M++G V G+ EA LF++MP K++ A MI GY G A
Sbjct: 121 LFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKA 180
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKTWNSIISVL------ 248
+ LF ++ RDL SW +I G + + A+ QM + + +++ISVL
Sbjct: 181 KILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSL 240
Query: 249 --IRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNV 305
++ G ++ H + K Y + S N ++ Y + G + + F + DV WN
Sbjct: 241 ASLQEG--RKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNA 298
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
MI + + L F +M+ + PD TF S+L+ C HA + +
Sbjct: 299 MIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACG-----------HAGKVHES 347
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
N F N+MI Y + P H + ++ L+ G EKA ++ +
Sbjct: 348 LNWF----NSMIESY-----------KIVPRPEH----FACLVDILSRGGQVEKAYKIIQ 388
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR-SAHYTCVVDLLGR 484
M F+ D + +L+AC V G K L+P+ S Y + ++
Sbjct: 389 EM---PFEADCGIWGALLAACHVHLNVKLGEL---AAKKIVELEPQNSGAYVVLSNIYAA 442
Query: 485 FGLIDEAMNLLNEIRADGIEVSPT 508
G+ E + +R G++ P
Sbjct: 443 AGMWGEVTRVRGLMREQGVKKQPA 466
>gi|115476932|ref|NP_001062062.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|42409025|dbj|BAD10278.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624031|dbj|BAF23976.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|215715342|dbj|BAG95093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640747|gb|EEE68879.1| hypothetical protein OsJ_27695 [Oryza sativa Japonica Group]
Length = 563
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/521 (37%), Positives = 302/521 (57%), Gaps = 4/521 (0%)
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQR-MDLAESYFKE 139
R +V N I+ G + A RVF MP +D VSWN ++ AL R + A S F +
Sbjct: 14 RLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDD 73
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
M +R+V SW ++ G + G + A F + P ++V +WN M+AG + G + A LF
Sbjct: 74 MPSRNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLF 133
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
+M +R++ S+ +++GL + +A F MP +W ++IS + N +++EA
Sbjct: 134 DQMPERNVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARK 193
Query: 260 YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
E P N+ + T +I GY + G++ +A ++F+ + +DV WN +I G N LGEE
Sbjct: 194 LFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEA 253
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
K ++ M G PD AT ++LT CS L L GR HA IK ++ NA++TM
Sbjct: 254 TKLYIIMLREGIKPDQATLIALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTM 313
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y++CGN+ + L F S+ DI+SWN+II A HG +K + LF M L P+DITF
Sbjct: 314 YSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDITF 373
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+ +LSAC +AG VD+ FD M +KY + PR+ HY C+VD+L R G +++A + + E+
Sbjct: 374 LSMLSACGHAGRVDESLKLFDLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEMP 433
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRED 559
+ E VWG LL A + H N+++GE+A + ++ + +SG Y++L+ +Y + G +
Sbjct: 434 S---EAEKNVWGTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGMWGE 490
Query: 560 AKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
R+ +QMKE GVKK+PG SW +I D H+F+ GD+SHP+
Sbjct: 491 VNRVRSQMKEKGVKKQPGHSWTEIADKVHMFVGGDASHPEM 531
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 238/503 (47%), Gaps = 28/503 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGF-LDNAMCLFNQMPERDMFTYNTVIA 60
R + A+ +FD MP+RD V+WN ++ ++ G L A LF+ MP R++ ++N++IA
Sbjct: 28 RAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIA 87
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G + ++ A F R+V +WN+M++G V G +++A +F MP ++VVS+ +
Sbjct: 88 GCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLFDQMPERNVVSYTTM 147
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ L C + A F M R++ SW M++G V + EARKLF+ MP K+V A
Sbjct: 148 VDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACT 207
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV-NSRRIDAAISYFKQMPETCEK 239
MI GY G + A LF + +D+ SW +I+G V N +A Y + E +
Sbjct: 208 AMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKP 267
Query: 240 TWNSIISV--------LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIK 290
++I++ L+R G + H+ + K + S N ++ Y + G V +
Sbjct: 268 DQATLIALLTACSSLALLRQG--RSTHAVVIKAMLESSISICNALMTMYSKCGNVDESEL 325
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
VF + ++D+ WN +I ++ ++ + F +M+ G P++ TF S+L+ C
Sbjct: 326 VFMSLKSQDIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHAGR 385
Query: 351 LDLGRQI-----HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISW 404
+D ++ AI + + + + +R G ++ A +P + W
Sbjct: 386 VDESLKLFDLMFSKYAISPRAEHYACI----VDILSRAGQLEKACSYIKEMPSEAEKNVW 441
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDD--ITFVGVLSACSYAGLVDQGRYYFDCM 462
+++C HG + + + L+DF+ + + +A G V++ R M
Sbjct: 442 GTLLCASQTHGNVQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGMWGEVNRVRSQ---M 498
Query: 463 KNKYFLQPRSAHYTCVVDLLGRF 485
K K + +T + D + F
Sbjct: 499 KEKGVKKQPGHSWTEIADKVHMF 521
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 99/256 (38%), Gaps = 55/256 (21%)
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY-AEKALE 422
+A ++ N IT AR G++ +A F ++P D +SWN+++ L G A
Sbjct: 10 LASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARS 69
Query: 423 LFERMRLTDFKPDDITFVGVLSAC--------------------------SYAGLVDQG- 455
LF+ M + I++ +++ C AGLV G
Sbjct: 70 LFDDMPSRNV----ISWNSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGS 125
Query: 456 ----RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
R FD M + + YT +VD L R G + A L + + + W
Sbjct: 126 MEDARSLFDQMPERNVVS-----YTTMVDGLARCGEVASARELFDAMPTRNL----VSWA 176
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI-LTEMYLSCGRREDAKRIFAQMKEN 570
A++ +N ++ ++ E P + V + Y G ++A+R+F +
Sbjct: 177 AMISGYVDNNMLE----EARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLF-----D 227
Query: 571 GVKKEPGCSWIQINDG 586
G++ + SW I G
Sbjct: 228 GIRAKDVISWNAIISG 243
>gi|334183275|ref|NP_175765.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806499|sp|Q9C8L6.2|PPR80_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g53600, mitochondrial; Flags: Precursor
gi|332194847|gb|AEE32968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 717
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/657 (31%), Positives = 357/657 (54%), Gaps = 46/657 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
RN +QEA+ +F +M R V+W MI Y +NG + A +F++MP R +YN +I
Sbjct: 62 RNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITA 121
Query: 62 LMQSD-NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK--DVVSWN 118
++++ ++ A E+F + ++ V++ +MI+G+V G DEA ++ P+K D V+ N
Sbjct: 122 MIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASN 181
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+++ + + + A F+ M ++V S + MV+G + GRIV+AR LFD+M ++V
Sbjct: 182 VLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVIT 241
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHD------------------RDLTSWKQ--LINGLV 218
W MI GY G LF +M RD +++ I+GLV
Sbjct: 242 WTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLV 301
Query: 219 NSRRID--------------------AAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
+ ++ A + F M +WNS+I+ L++ + EA+
Sbjct: 302 SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAY 361
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
EK P ++ SWT++I G+ GE+ +++F +M +D W MI N EE
Sbjct: 362 ELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEE 421
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L +F +M + P++ TF+SVL+ + L L G QIH + +K+ +V N++++
Sbjct: 422 ALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVS 481
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MY +CGN A FS + +I+S+N++I G +Y+G+ +KAL+LF + + +P+ +T
Sbjct: 482 MYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVT 541
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
F+ +LSAC + G VD G YF MK+ Y ++P HY C+VDLLGR GL+D+A NL++ +
Sbjct: 542 FLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
+ VWG+LL A + H + + E+A ++++ELEP+++ Y++L+++Y G+
Sbjct: 602 PC---KPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNR 658
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
D RI K +KK+PG SWI + H FL+GD S + + L ++ E+E
Sbjct: 659 DCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEME 715
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 223/466 (47%), Gaps = 27/466 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + EA +F M ++ V+ + M+ GY K G + +A LF++M ER++ T+ +I
Sbjct: 188 LRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMID 247
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLID-----EALRVFHG----MPL 111
G ++ + +F M V NS + D E ++ HG MPL
Sbjct: 248 GYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQI-HGLVSRMPL 306
Query: 112 K-DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+ D+ N ++ M A++ F M +D SW ++ GLV+ +I EA +LF+K
Sbjct: 307 EFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEK 366
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
MP KD+ +W MI G+ G + +LF M ++D +W +I+ V++ + A+ +F
Sbjct: 367 MPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWF 426
Query: 231 KQM--PETCEK--TWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YFEM 282
+M E C T++S++S + E H + K N S N +V Y +
Sbjct: 427 HKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKC 486
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G A K+F ++ ++ +N MI G N G++ LK F ++ SG P+ TF ++L
Sbjct: 487 GNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALL 546
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPI-- 398
+ C + +DLG + + +++K + N + M+ + R G + A S++P
Sbjct: 547 SACVHVGYVDLGWK-YFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKP 605
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
H + W S++ H + A EL + +L + +PD T VLS
Sbjct: 606 HSGV-WGSLLSASKTHLRVDLA-ELAAK-KLIELEPDSATPYVVLS 648
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 140/333 (42%), Gaps = 55/333 (16%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
NS IS RNG ++EA + + +I SW +I Y E G++ A +VF+ M R T
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 302 VWNVMIFGLGEN--DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
+N MI + +N DLG + + F + P + ++ +++T D ++A
Sbjct: 114 SYNAMITAMIKNKCDLG-KAYELFCDI----PEKNAVSYATMITGFVRAGRFDEAEFLYA 168
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
+ R+ + SN +++ Y R G A+ F + + +++S +S++ HGY
Sbjct: 169 ETPVKFRD--SVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMV-----HGY--- 218
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
C +VD R FD M + + +T ++
Sbjct: 219 --------------------------CKMGRIVD-ARSLFDRMTERNVIT-----WTAMI 246
Query: 480 DLLGRFGLIDEAMNLLNEIRADG-IEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELE 537
D + G ++ L +R +G ++V+ + ACR + G +I G ++
Sbjct: 247 DGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHG--LVSRM 304
Query: 538 PNNSGVYL--ILTEMYLSCGRREDAKRIFAQMK 568
P ++L L MY G +AK +F MK
Sbjct: 305 PLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK 337
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/569 (37%), Positives = 313/569 (55%), Gaps = 25/569 (4%)
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+I +++ + A+ VFD + DV + MI+GY N D AL++F+ MP+KDVVSW
Sbjct: 1 MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSW 60
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
N +I +C + +A F EM R V SWT M+NG ++ G+I A LF KMP +D+
Sbjct: 61 NSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIA 120
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM---- 233
AWN MI GY NG V LFQ+M R++ SW +I GL R + A+ F+QM
Sbjct: 121 AWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCG 180
Query: 234 --PETCEKTWNSIISVL-----IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVG 286
+ T+ +I+ + G+ AH + Y + S +I Y ++
Sbjct: 181 VEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYIS-AALITFYANCKQME 239
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
+++VF +V +W ++ G G N E+ LK F +M G P+ ++FTS L C
Sbjct: 240 DSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCC 299
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
L LD GR+IH A+K+ V N++I MY RCGN+ ++ F + +I+SWNS
Sbjct: 300 GLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNS 359
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
+I G A HG AL F +M + +PD+ITF G+LSACS++G+ +GR F KY
Sbjct: 360 VIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLF-----KY 414
Query: 467 FLQPRSA-----HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
F + +SA HY C+VD+LGR G ++EA L IR ++ + VW LL AC +H+
Sbjct: 415 FSENKSAEVKLDHYACMVDILGRSGKLEEAEEL---IRNMPVKANSMVWLVLLSACTMHS 471
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
++V E A + +++LEP+ S Y++L+ +Y S R D RI +MK+ G+ K+PG SWI
Sbjct: 472 KLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWI 531
Query: 582 QINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
I + FLSGD SHP R+ L L
Sbjct: 532 TIKGWRNEFLSGDRSHPSSDRIYQKLEWL 560
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 223/490 (45%), Gaps = 63/490 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+RN RI EA+ +FDK+ D + +MI GY +N D+A+ LF +MP +D+ ++N++I
Sbjct: 6 LRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIK 65
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ A+++FD M R VV+W +MI+G++ G I+ A +F+ MP +D+ +WN +
Sbjct: 66 GCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSM 125
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA-- 178
I R++ F+EM R+V SWT M+ GL + GR EA LF +M V+
Sbjct: 126 IYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKP 185
Query: 179 -------------------------WNLMIAGYLDNGCVGVA-----------EDLFQKM 202
++ GY + + A ED +
Sbjct: 186 TSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF 245
Query: 203 HDR---DLTSWKQLINGL-VNSRRIDAAISYFKQMPETCEKTWNSIISVLIR-NGLV--- 254
H + ++ W L+ G +N + DA + + M E +S S L GL
Sbjct: 246 HGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALD 305
Query: 255 --KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
+E H+ K +++ ++IV Y+ G + + +F+ ++ +++ WN +I G
Sbjct: 306 WGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCA 365
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
++ G L FF QM S PD TFT +L+ CS GR + + N+
Sbjct: 366 QHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKY---FSENKSAE 422
Query: 372 VS----NAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFER 426
V M+ + R G ++ A ++P+ + + W ++ H LE+ ER
Sbjct: 423 VKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH----SKLEVAER 478
Query: 427 MR--LTDFKP 434
+ D +P
Sbjct: 479 AAKCIIDLEP 488
>gi|357148182|ref|XP_003574661.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 553
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 302/527 (57%), Gaps = 4/527 (0%)
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQR-MDLAESY 136
+ R +V N I+ G + A RVF MP +DVVSWN ++ AL R + A
Sbjct: 2 LATRLLVRDNQRITALARAGDVAAARRVFDAMPRRDVVSWNALLTALWRAGRDLPAARRL 61
Query: 137 FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
F +M +R+V SW +V G + G + A F + P ++V +WN M+AG + G + A
Sbjct: 62 FDDMPSRNVISWNSVVAGCLAHGDLDAASAYFARAPRRNVASWNAMLAGLVRLGRMDDAW 121
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
LF +M R++ S+ +++GL + A F MPE +W ++I+ + N + E
Sbjct: 122 ALFGEMPQRNVVSYTTMVDGLARRGEVARAREVFDAMPERNLVSWAAMITGYVENAMFDE 181
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
A E P N+ + T +I GY + G+V SA ++F+ + +DV WN MI G N G
Sbjct: 182 ARKLFEAMPDKNVVACTAMITGYCKDGDVESARRLFDGIPVKDVISWNAMITGYVHNGHG 241
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
EE +K + M G PD+AT ++LT CS L L GR HA A K T+ NA+
Sbjct: 242 EEAMKLHIIMFREGVKPDHATLIAILTACSALALLRQGRSTHAVATKTMLESSTSFCNAL 301
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+TMY++CGN+ + L F ++ I DI+SWN+II A HG +KA+ LF M P+D
Sbjct: 302 MTMYSKCGNVGESELVFMNLKIQDIVSWNTIIAAYAQHGKYQKAIALFHEMETRGLIPND 361
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
IT + +LSAC + G V+ FD M +KY + P + HY CVVD+LGR G +++A + +
Sbjct: 362 ITILSMLSACGHVGRVNDSLELFDLMSSKYAISPSAEHYACVVDILGRAGQLEKACSYIK 421
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
++ E VWGALLGA + H N+++GE+A + +++ + +SG Y++L+ +Y + G
Sbjct: 422 KM---PFEAERNVWGALLGASKTHGNVQLGELAAKMLVQSDSVSSGPYVMLSNIYAAAGM 478
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL 603
+ R+ QMKE GVKK+PG SW +I + ++F+ GD+SHP+ +++
Sbjct: 479 WGEVNRVRGQMKEKGVKKQPGYSWTEIANKVNMFVGGDASHPEMNKI 525
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 212/431 (49%), Gaps = 23/431 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGF-LDNAMCLFNQMPERDMFTYNTVIA 60
R + A+ +FD MP+RD V+WN ++ ++ G L A LF+ MP R++ ++N+V+A
Sbjct: 19 RAGDVAAARRVFDAMPRRDVVSWNALLTALWRAGRDLPAARRLFDDMPSRNVISWNSVVA 78
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G + ++ A F R+V +WN+M++G V G +D+A +F MP ++VVS+ +
Sbjct: 79 GCLAHGDLDAASAYFARAPRRNVASWNAMLAGLVRLGRMDDAWALFGEMPQRNVVSYTTM 138
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ L + A F M R++ SW M+ G V EARKLF+ MP K+V A
Sbjct: 139 VDGLARRGEVARAREVFDAMPERNLVSWAAMITGYVENAMFDEARKLFEAMPDKNVVACT 198
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA----ISYFKQMPET 236
MI GY +G V A LF + +D+ SW +I G V++ + A I F++ +
Sbjct: 199 AMITGYCKDGDVESARRLFDGIPVKDVISWNAMITGYVHNGHGEEAMKLHIIMFREGVKP 258
Query: 237 CEKTWNSIIS-----VLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIK 290
T +I++ L+R G + H+ K + S+ N ++ Y + G VG +
Sbjct: 259 DHATLIAILTACSALALLRQG--RSTHAVATKTMLESSTSFCNALMTMYSKCGNVGESEL 316
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL-- 348
VF + +D+ WN +I ++ ++ + F +M+ G P++ T S+L+ C +
Sbjct: 317 VFMNLKIQDIVSWNTIIAAYAQHGKYQKAIALFHEMETRGLIPNDITILSMLSACGHVGR 376
Query: 349 --PTLDLGRQIHAQ-AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISW 404
+L+L + ++ AI + + V + + R G ++ A +P + W
Sbjct: 377 VNDSLELFDLMSSKYAISPSAEHYACV----VDILGRAGQLEKACSYIKKMPFEAERNVW 432
Query: 405 NSIICGLAYHG 415
+++ HG
Sbjct: 433 GALLGASKTHG 443
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 168/384 (43%), Gaps = 62/384 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ A F + P+R+ +WN M+ G + G +D+A LF +MP+R++ +Y T++ GL +
Sbjct: 86 LDAASAYFARAPRRNVASWNAMLAGLVRLGRMDDAWALFGEMPQRNVVSYTTMVDGLARR 145
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEAL---------------------- 103
V A+EVFD M R++V+W +MI+GYV N + DEA
Sbjct: 146 GEVARAREVFDAMPERNLVSWAAMITGYVENAMFDEARKLFEAMPDKNVVACTAMITGYC 205
Query: 104 ---------RVFHGMPLKDVVSWNLVIGALVNC----QRMDLAESYFKEMGARDVASWTI 150
R+F G+P+KDV+SWN +I V+ + M L F+E D A+
Sbjct: 206 KDGDVESARRLFDGIPVKDVISWNAMITGYVHNGHGEEAMKLHIIMFREGVKPDHATLIA 265
Query: 151 MVN-----GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
++ L+R+GR A M N ++ Y G VG +E +F + +
Sbjct: 266 ILTACSALALLRQGRSTHAVAT-KTMLESSTSFCNALMTMYSKCGNVGESELVFMNLKIQ 324
Query: 206 DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN--SIISVLIRNGLVKEAHSYLE- 262
D+ SW +I + AI+ F +M ET N +I+S+L G V + LE
Sbjct: 325 DIVSWNTIIAAYAQHGKYQKAIALFHEM-ETRGLIPNDITILSMLSACGHVGRVNDSLEL 383
Query: 263 ------KYPYSNIASWTNVIVGYF----EMGEVGSAIKVFELMTTRDVTVWNVMIFGL-- 310
KY S A +V ++ + S IK R+ VW ++
Sbjct: 384 FDLMSSKYAISPSAEHYACVVDILGRAGQLEKACSYIKKMPFEAERN--VWGALLGASKT 441
Query: 311 -GENDLGEEGLKFFVQMK--ESGP 331
G LGE K VQ SGP
Sbjct: 442 HGNVQLGELAAKMLVQSDSVSSGP 465
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/616 (34%), Positives = 337/616 (54%), Gaps = 25/616 (4%)
Query: 6 IQEAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+++A+ LFD++P +R+ TWN ++ + K+G L +A +F +MPERD ++ ++ GL
Sbjct: 81 LRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLN 140
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEAL---RVFHGMPLK-----DVV 115
++ A + M ++ + + + +A R H +K V
Sbjct: 141 RAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVP 200
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
N V+ C + A + F+ M R V+SW MV+ GR+ A LF+ MP +
Sbjct: 201 VANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRS 260
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKM-HDRDLTSWKQLINGLVNS------RRIDAAIS 228
+ +WN MIAGY NG A LF +M H+ + + I ++++ RI +
Sbjct: 261 IVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVH 320
Query: 229 YFKQMPETC--EKTWNSIISVLIRNGLVKEAHSYLEKYPYS--NIASWTNVIVGYFEMGE 284
+ E + N++IS ++G V+ A +++ + N+ S+T ++ GY ++G+
Sbjct: 321 AYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGD 380
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+ SA ++F +M RDV W MI G +N +E + F M GP P++ T +VL++
Sbjct: 381 MESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSV 440
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIIS 403
C+ L LD G+QIH +AI+ Q ++VSNA+ITMYAR G+ A F V + I+
Sbjct: 441 CASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT 500
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
W S+I LA HG E+A+ LFE M +PD IT+VGVLSACS+AG V++G+ Y+D +K
Sbjct: 501 WTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIK 560
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
N++ + P +HY C+VDLL R GL EA IR +E WG+LL ACR+H N
Sbjct: 561 NEHQIAPEMSHYACMVDLLARAGLFSEAQEF---IRRMPVEPDAIAWGSLLSACRVHKNA 617
Query: 524 KVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQI 583
++ E+A E+++ ++PNNSG Y + +Y +CGR DA RI+ KE V+KE G SW I
Sbjct: 618 ELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHI 677
Query: 584 NDGGHVFLSGDSSHPK 599
HVF + D HP+
Sbjct: 678 RSKIHVFGADDVVHPQ 693
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 185/415 (44%), Gaps = 76/415 (18%)
Query: 159 GRIVEARKLFDKMP--AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
G + +AR+LFD++P ++V WN +++ + +G + A +F +M +RD SW ++ G
Sbjct: 79 GGLRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVG 138
Query: 217 LVNSRRIDAAISYFKQMPE---------------------------------------TC 237
L + R AI M +C
Sbjct: 139 LNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSC 198
Query: 238 EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
NS++++ + G + A + E+ P +++SW ++ +G + A +FE M
Sbjct: 199 VPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPD 258
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
R + WN MI G +N L + LK F +M ES +PD T TSVL+ C++L + +G+Q
Sbjct: 259 RSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQ 318
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQ-------------------SALLE----- 392
+HA ++ + V+NA+I+ YA+ G+++ +ALLE
Sbjct: 319 VHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKI 378
Query: 393 ---------FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
F + D+++W ++I G +G ++A++LF M +P+ T VL
Sbjct: 379 GDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVL 438
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
S C+ +D G+ C + L+ S+ ++ + R G A + +++
Sbjct: 439 SVCASLACLDYGK-QIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQV 492
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 192/462 (41%), Gaps = 78/462 (16%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVI 59
R+ A++LF+ MP R V+WN MI GY +NG A+ LF++M D FT +V+
Sbjct: 245 RMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVL 304
Query: 60 AGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD- 113
+ NV+ K+V M VT N++IS Y +G ++ A R+ D
Sbjct: 305 SACANLGNVRIGKQVHAYILRTEMAYNSQVT-NALISTYAKSGSVENARRIMDQSMETDL 363
Query: 114 -VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
V+S+ ++ V M+ A F M RDV +WT M+ G + GR EA LF M
Sbjct: 364 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 423
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+ + +A L D +++H R + S
Sbjct: 424 TCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS----------------------- 460
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
+ E N+II++ R+G +P+ A ++F
Sbjct: 461 LLEQSSSVSNAIITMYARSG----------SFPW---------------------ARRMF 489
Query: 293 ELMTTRDVTV-WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
+ + R T+ W MI L ++ GEE + F +M +G PD T+ VL+ CS +
Sbjct: 490 DQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFV 549
Query: 352 DLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNSII 408
+ G++ + Q IK +S+ M+ + AR G A +P+ D I+W S++
Sbjct: 550 NEGKRYYDQ-IKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLL 608
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDD----ITFVGVLSAC 446
H AE A E++ D P++ V SAC
Sbjct: 609 SACRVHKNAELAELAAEKLLSID--PNNSGAYSAIANVYSAC 648
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 43/163 (26%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIA-------------------------------- 365
+ +L +C GR IHA+A+K
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 366 -------RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
RN FT N++++M+A+ G + A F+ +P D +SW ++ GL G
Sbjct: 89 DEIPLARRNVFTW--NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFG 146
Query: 419 KALELFERMRLTDFKPDDITFVGVLSAC--SYAGLVDQGRYYF 459
+A++ M F P T VLS+C + AG V + + F
Sbjct: 147 EAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSF 189
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/628 (34%), Positives = 334/628 (53%), Gaps = 43/628 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++ + +FDKMPQR+ TWN ++ G K GFLD A LF MPERD T+N++++G Q
Sbjct: 71 LEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQH 130
Query: 66 DNVQGAKEVFDGMEVRDVV----TWNSMISGYVCNGLIDEALRV-FHGMPLKDVVSWNLV 120
D + A F M V ++ S++S C+GL D V H + K ++
Sbjct: 131 DRCEEALCYFAMMHKEGFVLNEYSFASVLSA--CSGLNDMNKGVQVHSLIAKSPFLSDVY 188
Query: 121 IG-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
IG ALV+ C ++ A+ F EMG R+V SW ++ + G VEA +F M
Sbjct: 189 IGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESR 248
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
V+ + +A + A + Q++H R + + K L N ++ S
Sbjct: 249 VEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDK-LRNDIILS--------------- 292
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
N+ + + + +KEA + P N+ + T++I GY +A +F M
Sbjct: 293 ------NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM 346
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
R+V WN +I G +N EE L F +K P + +F ++L C+DL L LG
Sbjct: 347 AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGM 406
Query: 356 QIHAQAIK------IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
Q H +K V N++I MY +CG ++ L F + D +SWN++I
Sbjct: 407 QAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMII 466
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
G A +GY +ALELF M + KPD IT +GVLSAC +AG V++GR+YF M + +
Sbjct: 467 GFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVA 526
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
P HYTC+VDLLGR G ++EA +++ E+ ++ +WG+LL AC++H NI +G+
Sbjct: 527 PLRDHYTCMVDLLGRAGFLEEAKSMIEEM---PMQPDSVIWGSLLAACKVHRNITLGKYV 583
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
E+++E+EP+NSG Y++L+ MY G+ ED + M++ GV K+PGCSWI+I HV
Sbjct: 584 AEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHV 643
Query: 590 FLSGDSSHPKFHRLRYLLNLLHTEIERE 617
F+ D SHP+ ++ LL++L E+ E
Sbjct: 644 FMVKDKSHPRKKQIHSLLDILIAEMRPE 671
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 120/218 (55%), Gaps = 6/218 (2%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N +I + G +++ +K P NI +W +V+ G ++G + A +F M RD
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN M+ G ++D EE L +F M + G + +F SVL+ CS L ++ G Q+H+
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSL- 177
Query: 362 IKIARNQFTT---VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
IA++ F + + +A++ MY++CGN+ A F + +++SWNS+I +G A
Sbjct: 178 --IAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAV 235
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+AL++F+ M + +PD++T V+SAC+ + G+
Sbjct: 236 EALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQ 273
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 143/329 (43%), Gaps = 31/329 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ +RI+EA+ +FD MP R+ + MI GY A +F +M ER++ ++N +IAG
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYV--CNGLIDEALR-------VFHGMPLK 112
Q+ + A +F ++ V + + + C L + L + HG +
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQ 420
Query: 113 -----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
D+ N +I V C ++ F++M RD SW M+ G + G EA +L
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALEL 480
Query: 168 FDKMPAKDVQAWNLMIAGYLDN-GCVGVAED---LFQKMHDRDL------TSWKQLINGL 217
F +M + ++ + G L G G E+ F M RD + +++ L
Sbjct: 481 FREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM-TRDFGVAPLRDHYTCMVDLL 539
Query: 218 VNSRRIDAAISYFKQMPETCEKT-WNSIISV--LIRNGLVKE--AHSYLEKYPYSNIASW 272
+ ++ A S ++MP + W S+++ + RN + + A LE P SN +
Sbjct: 540 GRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEP-SNSGPY 598
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
+ Y E+G+ + V + M VT
Sbjct: 599 VLLSNMYAELGKWEDVMNVRKSMRKEGVT 627
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 46/243 (18%)
Query: 334 DNATFTSVLTIC--SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
D++ F +L C S L + + R +HA IK + + N +I Y++CG+++
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F +P +I +WNS++ GL G+ ++A LF M D C++ +
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERD-------------QCTWNSM 123
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
V F Q H C +EA+ + +G ++ +
Sbjct: 124 VSG------------FAQ----HDRC-----------EEALCYFAMMHKEGFVLNEYSFA 156
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQMKE 569
++L AC N++ G + ++ P S VY+ L +MY CG DA+R+F +M +
Sbjct: 157 SVLSACSGLNDMNKG-VQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD 215
Query: 570 NGV 572
V
Sbjct: 216 RNV 218
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/616 (34%), Positives = 337/616 (54%), Gaps = 25/616 (4%)
Query: 6 IQEAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+++A+ LFD++P +R+ TWN ++ + K+G L +A +F +MPERD ++ ++ GL
Sbjct: 81 LRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLN 140
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEAL---RVFHGMPLK-----DVV 115
++ A + M ++ + + + +A R H +K V
Sbjct: 141 RAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVP 200
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
N V+ C + A + F+ M R V+SW MV+ GR+ A LF+ MP +
Sbjct: 201 VANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRS 260
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKM-HDRDLTSWKQLINGLVNS------RRIDAAIS 228
+ +WN MIAGY NG A LF +M H+ + + I ++++ RI +
Sbjct: 261 IVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVH 320
Query: 229 YFKQMPETC--EKTWNSIISVLIRNGLVKEAHSYLEKYPYS--NIASWTNVIVGYFEMGE 284
+ E + N++IS ++G V+ A +++ + N+ S+T ++ GY ++G+
Sbjct: 321 AYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGD 380
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+ SA ++F +M RDV W MI G +N +E + F M GP P++ T +VL++
Sbjct: 381 MESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSV 440
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIIS 403
C+ L LD G+QIH +AI+ + ++VSNA+ITMYAR G+ A F V + I+
Sbjct: 441 CASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT 500
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
W S+I LA HG E+A+ LFE M +PD IT+VGVLSACS+AG V++G+ Y+D +K
Sbjct: 501 WTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIK 560
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
N++ + P +HY C+VDLL R GL EA IR +E WG+LL ACR+H N
Sbjct: 561 NEHQIAPEMSHYACMVDLLARAGLFSEAQEF---IRRMPVEPDAIAWGSLLSACRVHKNA 617
Query: 524 KVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQI 583
++ E+A E+++ ++PNNSG Y + +Y +CGR DA RI+ KE V+KE G SW I
Sbjct: 618 ELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHI 677
Query: 584 NDGGHVFLSGDSSHPK 599
HVF + D HP+
Sbjct: 678 RSKIHVFGADDVVHPQ 693
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 185/415 (44%), Gaps = 76/415 (18%)
Query: 159 GRIVEARKLFDKMP--AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
G + +AR+LFD++P ++V WN +++ + +G + A +F +M +RD SW ++ G
Sbjct: 79 GGLRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVG 138
Query: 217 LVNSRRIDAAISYFKQMPE---------------------------------------TC 237
L + R AI M +C
Sbjct: 139 LNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSC 198
Query: 238 EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
NS++++ + G + A + E+ P +++SW ++ +G + A +FE M
Sbjct: 199 VPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPG 258
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
R + WN MI G +N L + LK F +M ES +PD T TSVL+ C++L + +G+Q
Sbjct: 259 RSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQ 318
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQ-------------------SALLE----- 392
+HA ++ + V+NA+I+ YA+ G+++ +ALLE
Sbjct: 319 VHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKI 378
Query: 393 ---------FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
F + D+++W ++I G +G ++A++LF M +P+ T VL
Sbjct: 379 GDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVL 438
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
S C+ +D G+ C + L+ S+ ++ + R G A + +++
Sbjct: 439 SVCASLACLDYGK-QIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQV 492
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 192/462 (41%), Gaps = 78/462 (16%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVI 59
R+ A++LF+ MP R V+WN MI GY +NG A+ LF++M D FT +V+
Sbjct: 245 RMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVL 304
Query: 60 AGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD- 113
+ NV+ K+V M VT N++IS Y +G ++ A R+ D
Sbjct: 305 SACANLGNVRIGKQVHAYILRTEMAYNSQVT-NALISTYAKSGSVENARRIMDQSMETDL 363
Query: 114 -VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
V+S+ ++ V M+ A F M RDV +WT M+ G + GR EA LF M
Sbjct: 364 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 423
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+ + +A L D +++H R + S
Sbjct: 424 TCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS----------------------- 460
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
+ E N+II++ R+G +P+ A ++F
Sbjct: 461 LLERSSSVSNAIITMYARSG----------SFPW---------------------ARRMF 489
Query: 293 ELMTTRDVTV-WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
+ + R T+ W MI L ++ GEE + F +M +G PD T+ VL+ CS +
Sbjct: 490 DQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFV 549
Query: 352 DLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNSII 408
+ G++ + Q IK +S+ M+ + AR G A +P+ D I+W S++
Sbjct: 550 NEGKRYYDQ-IKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLL 608
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDD----ITFVGVLSAC 446
H AE A E++ D P++ V SAC
Sbjct: 609 SACRVHKNAELAELAAEKLLSID--PNNSGAYSAIANVYSAC 648
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 43/163 (26%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIA-------------------------------- 365
+ +L +C GR IHA+A+K
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 366 -------RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
RN FT N++++M+A+ G + A F+ +P D +SW ++ GL G
Sbjct: 89 DEIPLARRNVFTW--NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFG 146
Query: 419 KALELFERMRLTDFKPDDITFVGVLSAC--SYAGLVDQGRYYF 459
+A++ M F P T VLS+C + AG V + + F
Sbjct: 147 EAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSF 189
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/681 (31%), Positives = 343/681 (50%), Gaps = 82/681 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N ++ A+ LFD+MP+++ +WN ++ GY + A LF+QMPER+ ++ +I+
Sbjct: 275 VQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMIS 334
Query: 61 GLMQSDNVQGAKEVF-------------------------DGMEV--------------R 81
G + + A +VF D +E+
Sbjct: 335 GYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEG 394
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
DVV +++++ Y NG +D A+ F MP ++ SW +I A C R+D A ++ +
Sbjct: 395 DVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVP 454
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+ VA+ T M+ + GRI +AR +FD++ +V AWN +IAGY NG + A+DLFQK
Sbjct: 455 EQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQK 514
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAI---------------SYFKQMPETCEK------- 239
M ++ SW +I G V + A+ S F C
Sbjct: 515 MPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIG 574
Query: 240 -----------------TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
N +IS+ + G V++ + SW ++I G E
Sbjct: 575 RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSEN 634
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
+ A VFE M RDV W +I + GE L F+ M G P+ T TS+L
Sbjct: 635 YMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLL 694
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
+ C +L + LG Q HA K+ + F V N++ITMY +CG + F +P HD+I
Sbjct: 695 SACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLI 753
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
+WN+++ G A +G ++A+++FE+M + PD ++F+GVL ACS+AGLVD+G +F+ M
Sbjct: 754 TWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSM 813
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
KY + P HYTC+VDLLGR G + EA L+ + ++ +W ALLGACRIH N
Sbjct: 814 TQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENM---PVKPDSVIWEALLGACRIHRN 870
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
+++G+ ER+ ++ S Y++L+ ++ S G + I MK+ G+ KEPG SWIQ
Sbjct: 871 VELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQ 930
Query: 583 INDGGHVFLSGDSSHPKFHRL 603
+ + H F++GD +H + +
Sbjct: 931 VKNKLHCFVTGDRTHDQIEEI 951
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/527 (29%), Positives = 263/527 (49%), Gaps = 70/527 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R++EA+ +F++M QRD V+WN MI GY +NG +D A LF+ +++ T+ ++ G
Sbjct: 183 RLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTG 242
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ ++ A+EVF+ M R+VV+WN+MISGYV NG + A ++F MP K+V SWN V+
Sbjct: 243 YAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVV 302
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM------PAK- 174
+C RM A F +M R+ SW +M++G V EA +F KM P +
Sbjct: 303 TGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQS 362
Query: 175 --------------------------------DVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
DV + ++ Y NG + +A F+ M
Sbjct: 363 IFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETM 422
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLE 262
+R+ SW +I R+D AI ++++PE T ++++ + G +++A +
Sbjct: 423 PERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFD 482
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ N+ +W +I GY + G + A +F+ M ++ W MI G +N+ E L+
Sbjct: 483 EILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALEL 542
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
+++ SG P +++FTS L+ C+++ +++GR IH+ AIK + V N +I+MYA+
Sbjct: 543 LIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAK 602
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYH---------------------------- 414
CGN++ F ++ + D +SWNS+I GL+ +
Sbjct: 603 CGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAY 662
Query: 415 ---GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
G+ E AL+LF M KP+ +T +LSAC G + G +
Sbjct: 663 VQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQF 709
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 144/348 (41%), Gaps = 38/348 (10%)
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
K+ P+T N+ I L R G V+EA + ++ SW ++I GY + G+V A
Sbjct: 164 KETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARL 223
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+F+ +++ W +++ G + EE + F M E NA +
Sbjct: 224 LFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGY--------- 274
Query: 351 LDLGRQIHAQAIKIARNQFTTVS-------NAMITMYARCGNIQSALLEFSSVPIHDIIS 403
+ +K AR F + N+++T Y C + A F +P + +S
Sbjct: 275 ------VQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVS 328
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ---GRYYFD 460
W +I G + +A ++F +M T +PD FV VLSA + GL D G
Sbjct: 329 WMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAIT--GLDDLELIGSLRPI 386
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC-RI 519
+K Y + + +++ R G +D AM+ E + E S T A C R+
Sbjct: 387 AIKTGY--EGDVVVGSAILNAYTRNGSLDLAMHFF-ETMPERNEYSWTTMIAAFAQCGRL 443
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ I++ E E+ + + + Y GR + A+ IF ++
Sbjct: 444 DDAIQLYERVPEQTVATKT-------AMMTAYAQVGRIQKARLIFDEI 484
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/628 (34%), Positives = 332/628 (52%), Gaps = 43/628 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++ + LFDKMPQR+ TWN ++ G K GFLD A LF MPERD T+N++++G Q
Sbjct: 71 LEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQH 130
Query: 66 DNVQGAKEVFDGMEVRDVV----TWNSMISGYVCNGLIDEALRV-FHGMPLKDVVSWNLV 120
D + A F M V T+ S +S C+GL D V H + K ++
Sbjct: 131 DRCEEALYYFAMMHKEGFVLNEYTFASGLSA--CSGLNDMNRGVQIHSLIAKSPCLSDVY 188
Query: 121 IG-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
IG ALV+ C ++ A+ F EMG R+V SW ++ + G VEA K+F M
Sbjct: 189 IGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESW 248
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
V+ + +A + A + Q++H R + +L N ++ S
Sbjct: 249 VEPDEVTLASVISACASLSAIKVGQEVHAR-VVKMDKLRNDIILS--------------- 292
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
N+ + + + +KEA + P N+ + T+++ GY +A +F M
Sbjct: 293 ------NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKM 346
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
R+V WN +I G +N EE L F +K P + TF ++L C+DL L LG
Sbjct: 347 AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGM 406
Query: 356 QIHAQAIK------IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
Q H +K V N++I MY +CG ++ L F + D +SWN++I
Sbjct: 407 QAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMII 466
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
G A +GY +ALELF M + KPD IT +GVLSAC +AG V++GR+YF M + +
Sbjct: 467 GFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVA 526
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
P HYTC+VDLLGR G ++EA +++ E+ ++ +WG+LL AC++H NI +G+
Sbjct: 527 PLRDHYTCMVDLLGRAGFLEEAKSIIEEM---PVQPDSVIWGSLLAACKVHRNITLGKYV 583
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
E++ E+E +NSG Y++L+ MY G+ DA + M++ GV K+PGCSWI+I HV
Sbjct: 584 AEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHV 643
Query: 590 FLSGDSSHPKFHRLRYLLNLLHTEIERE 617
F+ D SHP+ ++ LL++L E+ ++
Sbjct: 644 FMVKDKSHPRKKQIHSLLDILIAEMRQK 671
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 148/340 (43%), Gaps = 73/340 (21%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N +I Y G + LF KM R++ +W ++ GL +D A S F+ MPE +
Sbjct: 59 NRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 240 TWNSIISVLIRNGLVKEA--------------------------------------HSYL 261
TWNS++S ++ +EA HS +
Sbjct: 119 TWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLI 178
Query: 262 EKYP-YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
K P S++ + ++ Y + G V A +VF+ M R+V WN +I +N E L
Sbjct: 179 AKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEAL 238
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI--ARNQFTTVSNAMIT 378
K F M ES PD T SV++ C+ L + +G+++HA+ +K+ RN +SNA +
Sbjct: 239 KVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDI-ILSNAFVD 297
Query: 379 MYARCGNIQSALLEFSSVPIHDII-------------------------------SWNSI 407
MYA+C I+ A F S+PI ++I SWN++
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
I G +G E+AL LF ++ P TF +L AC+
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACA 397
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 144/328 (43%), Gaps = 29/328 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ +RI+EA+ +FD MP R+ + M+ GY A +F +M ER++ ++N +IAG
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYV--CNGLIDEALR-------VFHGMPLK 112
Q+ + A +F ++ V + + + C L D L + HG +
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQ 420
Query: 113 -----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
D+ N +I V C ++ F++M RD SW M+ G + G EA +L
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALEL 480
Query: 168 FDKMPAKDVQAWNLMIAGYLDN-GCVGVAED---LFQKMHDRDL------TSWKQLINGL 217
F +M + ++ + G L G G E+ F M RD + +++ L
Sbjct: 481 FREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM-TRDFGVAPLRDHYTCMVDLL 539
Query: 218 VNSRRIDAAISYFKQMPETCEKT-WNSIISV--LIRN-GLVKEAHSYLEKYPYSNIASWT 273
+ ++ A S ++MP + W S+++ + RN L K L + SN +
Sbjct: 540 GRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYV 599
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVT 301
+ Y E+G+ G A+ V +LM VT
Sbjct: 600 LLSNMYAELGKWGDAMNVRKLMRKEGVT 627
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 46/242 (19%)
Query: 335 NATFTSVLTICSDL--PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
++ F +L C L +D+ R +HA IK + + N +I YA+CG+++
Sbjct: 19 SSPFAKLLDSCIKLKLSAIDV-RCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQL 77
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F +P ++ +WNS++ GL G+ ++A LF M + D T+ ++S +
Sbjct: 78 FDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMP----ERDQCTWNSMVSGFAQHDRC 133
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
++ YYF M + F +LNE + +
Sbjct: 134 EEALYYFAMMHKEGF--------------------------VLNEY----------TFAS 157
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQMKEN 570
L AC N++ G + ++ P S VY+ L +MY CG DA+++F +M +
Sbjct: 158 GLSACSGLNDMNRG-VQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDR 216
Query: 571 GV 572
V
Sbjct: 217 NV 218
>gi|12324033|gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Arabidopsis thaliana]
Length = 839
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/639 (32%), Positives = 349/639 (54%), Gaps = 46/639 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
RN +QEA+ +F +M R V+W MI Y +NG + A +F++MP R +YN +I
Sbjct: 62 RNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITA 121
Query: 62 LMQSD-NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK--DVVSWN 118
++++ ++ A E+F + ++ V++ +MI+G+V G DEA ++ P+K D V+ N
Sbjct: 122 MIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASN 181
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+++ + + + A F+ M ++V S + MV+G + GRIV+AR LFD+M ++V
Sbjct: 182 VLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVIT 241
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHD------------------RDLTSWKQ--LINGLV 218
W MI GY G LF +M RD +++ I+GLV
Sbjct: 242 WTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLV 301
Query: 219 NSRRID--------------------AAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
+ ++ A + F M +WNS+I+ L++ + EA+
Sbjct: 302 SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAY 361
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
EK P ++ SWT++I G+ GE+ +++F +M +D W MI N EE
Sbjct: 362 ELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEE 421
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L +F +M + P++ TF+SVL+ + L L G QIH + +K+ +V N++++
Sbjct: 422 ALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVS 481
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MY +CGN A FS + +I+S+N++I G +Y+G+ +KAL+LF + + +P+ +T
Sbjct: 482 MYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVT 541
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
F+ +LSAC + G VD G YF MK+ Y ++P HY C+VDLLGR GL+D+A NL++ +
Sbjct: 542 FLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
+ VWG+LL A + H + + E+A ++++ELEP+++ Y++L+++Y G+
Sbjct: 602 PC---KPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNR 658
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
D RI K +KK+PG SWI + H FL+GD S
Sbjct: 659 DCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQ 697
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 223/466 (47%), Gaps = 27/466 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + EA +F M ++ V+ + M+ GY K G + +A LF++M ER++ T+ +I
Sbjct: 188 LRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMID 247
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLID-----EALRVFHG----MPL 111
G ++ + +F M V NS + D E ++ HG MPL
Sbjct: 248 GYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQI-HGLVSRMPL 306
Query: 112 K-DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+ D+ N ++ M A++ F M +D SW ++ GLV+ +I EA +LF+K
Sbjct: 307 EFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEK 366
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
MP KD+ +W MI G+ G + +LF M ++D +W +I+ V++ + A+ +F
Sbjct: 367 MPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWF 426
Query: 231 KQM--PETCEK--TWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YFEM 282
+M E C T++S++S + E H + K N S N +V Y +
Sbjct: 427 HKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKC 486
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G A K+F ++ ++ +N MI G N G++ LK F ++ SG P+ TF ++L
Sbjct: 487 GNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALL 546
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPI-- 398
+ C + +DLG + + +++K + N + M+ + R G + A S++P
Sbjct: 547 SACVHVGYVDLGWK-YFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKP 605
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
H + W S++ H + A EL + +L + +PD T VLS
Sbjct: 606 HSGV-WGSLLSASKTHLRVDLA-ELAAK-KLIELEPDSATPYVVLS 648
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 140/333 (42%), Gaps = 55/333 (16%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
NS IS RNG ++EA + + +I SW +I Y E G++ A +VF+ M R T
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 302 VWNVMIFGLGEN--DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
+N MI + +N DLG + + F + P + ++ +++T D ++A
Sbjct: 114 SYNAMITAMIKNKCDLG-KAYELFCDI----PEKNAVSYATMITGFVRAGRFDEAEFLYA 168
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
+ R+ + SN +++ Y R G A+ F + + +++S +S++ HGY
Sbjct: 169 ETPVKFRD--SVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMV-----HGY--- 218
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
C +VD R FD M + + +T ++
Sbjct: 219 --------------------------CKMGRIVD-ARSLFDRMTERNVIT-----WTAMI 246
Query: 480 DLLGRFGLIDEAMNLLNEIRADG-IEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELE 537
D + G ++ L +R +G ++V+ + ACR + G +I G ++
Sbjct: 247 DGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHG--LVSRM 304
Query: 538 PNNSGVYL--ILTEMYLSCGRREDAKRIFAQMK 568
P ++L L MY G +AK +F MK
Sbjct: 305 PLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK 337
>gi|8671867|gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca
gb|AF151215 and contains multiple PPR PF|01535 repeats
[Arabidopsis thaliana]
Length = 816
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/639 (32%), Positives = 349/639 (54%), Gaps = 46/639 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
RN +QEA+ +F +M R V+W MI Y +NG + A +F++MP R +YN +I
Sbjct: 62 RNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITA 121
Query: 62 LMQSD-NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK--DVVSWN 118
++++ ++ A E+F + ++ V++ +MI+G+V G DEA ++ P+K D V+ N
Sbjct: 122 MIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASN 181
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+++ + + + A F+ M ++V S + MV+G + GRIV+AR LFD+M ++V
Sbjct: 182 VLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVIT 241
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHD------------------RDLTSWKQ--LINGLV 218
W MI GY G LF +M RD +++ I+GLV
Sbjct: 242 WTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLV 301
Query: 219 NSRRID--------------------AAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
+ ++ A + F M +WNS+I+ L++ + EA+
Sbjct: 302 SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAY 361
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
EK P ++ SWT++I G+ GE+ +++F +M +D W MI N EE
Sbjct: 362 ELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEE 421
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L +F +M + P++ TF+SVL+ + L L G QIH + +K+ +V N++++
Sbjct: 422 ALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVS 481
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MY +CGN A FS + +I+S+N++I G +Y+G+ +KAL+LF + + +P+ +T
Sbjct: 482 MYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVT 541
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
F+ +LSAC + G VD G YF MK+ Y ++P HY C+VDLLGR GL+D+A NL++ +
Sbjct: 542 FLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
+ VWG+LL A + H + + E+A ++++ELEP+++ Y++L+++Y G+
Sbjct: 602 PC---KPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNR 658
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
D RI K +KK+PG SWI + H FL+GD S
Sbjct: 659 DCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQ 697
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 223/466 (47%), Gaps = 27/466 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + EA +F M ++ V+ + M+ GY K G + +A LF++M ER++ T+ +I
Sbjct: 188 LRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMID 247
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLID-----EALRVFHG----MPL 111
G ++ + +F M V NS + D E ++ HG MPL
Sbjct: 248 GYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQI-HGLVSRMPL 306
Query: 112 K-DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+ D+ N ++ M A++ F M +D SW ++ GLV+ +I EA +LF+K
Sbjct: 307 EFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEK 366
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
MP KD+ +W MI G+ G + +LF M ++D +W +I+ V++ + A+ +F
Sbjct: 367 MPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWF 426
Query: 231 KQM--PETCEK--TWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YFEM 282
+M E C T++S++S + E H + K N S N +V Y +
Sbjct: 427 HKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKC 486
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G A K+F ++ ++ +N MI G N G++ LK F ++ SG P+ TF ++L
Sbjct: 487 GNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALL 546
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPI-- 398
+ C + +DLG + + +++K + N + M+ + R G + A S++P
Sbjct: 547 SACVHVGYVDLGWK-YFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKP 605
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
H + W S++ H + A EL + +L + +PD T VLS
Sbjct: 606 HSGV-WGSLLSASKTHLRVDLA-ELAAK-KLIELEPDSATPYVVLS 648
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 140/333 (42%), Gaps = 55/333 (16%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
NS IS RNG ++EA + + +I SW +I Y E G++ A +VF+ M R T
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 302 VWNVMIFGLGEN--DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
+N MI + +N DLG + + F + P + ++ +++T D ++A
Sbjct: 114 SYNAMITAMIKNKCDLG-KAYELFCDI----PEKNAVSYATMITGFVRAGRFDEAEFLYA 168
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
+ R+ + SN +++ Y R G A+ F + + +++S +S++ HGY
Sbjct: 169 ETPVKFRD--SVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMV-----HGY--- 218
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
C +VD R FD M + + +T ++
Sbjct: 219 --------------------------CKMGRIVD-ARSLFDRMTERNVIT-----WTAMI 246
Query: 480 DLLGRFGLIDEAMNLLNEIRADG-IEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELE 537
D + G ++ L +R +G ++V+ + ACR + G +I G ++
Sbjct: 247 DGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHG--LVSRM 304
Query: 538 PNNSGVYL--ILTEMYLSCGRREDAKRIFAQMK 568
P ++L L MY G +AK +F MK
Sbjct: 305 PLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK 337
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/573 (35%), Positives = 326/573 (56%), Gaps = 15/573 (2%)
Query: 53 FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
+Y T +A +++ + A+ +FD + ++ + MI+GY N + +AL++F M ++
Sbjct: 13 LSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVR 72
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
DVVSWN +I ++C + +A F EM ++V SWT MVNG ++ GR+ A++LF M
Sbjct: 73 DVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMH 132
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
KDV AWN M+ GY +NG V LF++M RD+ SW +I GL + + + A+ FK+
Sbjct: 133 VKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKK 192
Query: 233 MPET-CEKTWNSIISVL------IRNGLVKEAHSYLEK---YPYSNIASWTNVIVGYFEM 282
M + E TW++ VL + L + H ++ K + + I+ ++I Y
Sbjct: 193 MLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFIS--VSLITFYANC 250
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
++ A K+F T++V W ++ N+ ++ L+ F M + G P+ +TF+ L
Sbjct: 251 MKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITL 310
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
C L LD G++IH AIK+ V N+++ MY CGN+ SA+ F ++ DI+
Sbjct: 311 KACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIV 370
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
SWNSII G A HG+ AL F +M P++ITF G+LSACS +G++ +GR +F+ +
Sbjct: 371 SWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYI 430
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
R HY C+VD+LGR G +DEA L +R ++ + +W ALL ACR+H+N
Sbjct: 431 SRYKSNVLRPQHYACMVDILGRCGKLDEAEEL---VRYMPVKANSMIWLALLSACRVHSN 487
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
++V E A + +++LEPN S Y++L+ +Y S GR D R+ +MK+ G+ K+PG SW+
Sbjct: 488 LEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVV 547
Query: 583 INDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+ H FLS D SHP R+ L+ L +++
Sbjct: 548 LRGKKHEFLSADRSHPLSERIYEKLDWLGKKLK 580
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 226/487 (46%), Gaps = 57/487 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N R+ +A+ +FDK+P + + MI GY +N L +A+ LF++M RD+ ++N++I
Sbjct: 23 LKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIK 82
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G + N+ A +FD M ++V++W +M++GY+ G ++ A R+F M +KDV +WN +
Sbjct: 83 GCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAM 142
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ-AW 179
+ R++ F+EM RDV SWT M+ GL G+ EA +F KM V+ W
Sbjct: 143 VHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTW 202
Query: 180 N------------------LMIAGYLDN-GC-------------------VGVAEDLFQK 201
+ + + G++ GC + A +F +
Sbjct: 203 STFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNE 262
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN--GLV----- 254
+++ W L+ V + + A+ F M + S S+ ++ GL
Sbjct: 263 TLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKG 322
Query: 255 KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
KE H+ K +++ +++V Y E G V SA+ VF + +D+ WN +I G ++
Sbjct: 323 KEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQH 382
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
G L FF QM G P+ TFT +L+ CS L GR + N
Sbjct: 383 GFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQH 442
Query: 374 NA-MITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM--R 428
A M+ + RCG + A L+ + V + +I W +++ H LE+ ER
Sbjct: 443 YACMVDILGRCGKLDEAEELVRYMPVKANSMI-WLALLSACRVHS----NLEVAERAAKH 497
Query: 429 LTDFKPD 435
+ D +P+
Sbjct: 498 ILDLEPN 504
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 116/226 (51%), Gaps = 14/226 (6%)
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVG 286
+++ + T ++ + ++ ++N + +A +K P N+ +T +I GY +
Sbjct: 1 MAHITRYTRTITLSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLC 60
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL--KFFVQMKESGPSPDNATFTSVLTI 344
A+K+F+ M+ RDV WN MI G D G G+ + F +M P + ++T+++
Sbjct: 61 DALKLFDRMSVRDVVSWNSMIKGC--LDCGNLGMATRLFDEM----PEKNVISWTTMVN- 113
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIHDIIS 403
L GR AQ + + + + NAM+ Y G ++ + F +P+ D+IS
Sbjct: 114 ----GYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVIS 169
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
W S+I GL +G +E+AL +F++M + +P TF VLSAC+ A
Sbjct: 170 WTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANA 215
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/616 (34%), Positives = 342/616 (55%), Gaps = 27/616 (4%)
Query: 7 QEAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
+EA+ LFD++P QR+ TWN ++ Y K+G L +A +F +MPERD ++ ++ GL +
Sbjct: 80 REARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNR 139
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEAL---RVFHGMPLKDVVS----- 116
A ++F M + ++ + + EA R H +K +S
Sbjct: 140 VGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPV 199
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
N V+ C + A + F+ M R V+SW MV+ GR+ A LF+ MP + +
Sbjct: 200 ANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTI 259
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL-INGLVNSRRIDAAISYFKQ--- 232
+WN +IAGY NG A F +M + + I ++++ +S KQ
Sbjct: 260 VSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHA 319
Query: 233 ------MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS--NIASWTNVIVGYFEMGE 284
MP + T N++IS+ ++G V+ A +++ + N+ S+T ++ GY ++G+
Sbjct: 320 YILRSRMPYIGQVT-NALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGD 378
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+ A ++F++M+ RDV W MI G +N +E ++ F M SGP P++ T +VL++
Sbjct: 379 MKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSV 438
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIIS 403
C+ L L+ G+QIH +AI+ + Q ++VSN+++TMYAR G++ A F V + ++
Sbjct: 439 CASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVT 498
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
W S+I LA HG E A+ LFE M KPD ITFVGVLSAC++ G VD+G+ YF ++
Sbjct: 499 WTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQ 558
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
+K+ + P +HY C+VDLL R GL EA + ++ +E WG+LL ACR+H N
Sbjct: 559 DKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQM---PVEPDAIAWGSLLSACRVHKNA 615
Query: 524 KVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQI 583
+ E+A E+++ ++P NSG Y L+ +Y +CGR DA +I+ + K+ VKKE G SW I
Sbjct: 616 DLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHI 675
Query: 584 NDGGHVFLSGDSSHPK 599
+ HVF + D HP+
Sbjct: 676 GNRVHVFGADDVLHPQ 691
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 178/443 (40%), Gaps = 72/443 (16%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-----RDMFTYNTVI 59
R+ A +LF+ MP R V+WN +I GY +NG A+ F++M D FT +V+
Sbjct: 243 RMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVL 302
Query: 60 AGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD- 113
+ V K+V M VT N++IS Y +G ++ A V + D
Sbjct: 303 SACANLGMVSIGKQVHAYILRSRMPYIGQVT-NALISMYAKSGSVENARGVMQQAVMADL 361
Query: 114 -VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
V+S+ ++ V M A F M RDV +WT M+ G + G EA +LF M
Sbjct: 362 NVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMI 421
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+ + +A L + +++H + + S
Sbjct: 422 RSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRS----------------------- 458
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKV 291
+ E NSI+++ R+G + A ++ + +WT++IV
Sbjct: 459 LQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIV-------------- 504
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
L ++ LGE+ + F +M G PD TF VL+ C+ + +
Sbjct: 505 -----------------ALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFV 547
Query: 352 DLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNSII 408
D G++ + Q ++ +S+ M+ + AR G A +P+ D I+W S++
Sbjct: 548 DEGKR-YFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLL 606
Query: 409 CGLAYHGYAEKALELFERMRLTD 431
H A+ A E++ D
Sbjct: 607 SACRVHKNADLAELAAEKLLSID 629
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 203/598 (33%), Positives = 326/598 (54%), Gaps = 13/598 (2%)
Query: 22 VTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
+T N ++R Y K G + A LF++ PE + F + +I G +++ + A F M
Sbjct: 37 LTLNKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRE 96
Query: 82 DVVTWNSMIS---------GYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDL 132
++V N I+ G + +G + L V G D+V N++I + C M
Sbjct: 97 NIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEF-DLVVKNVMIELFMRCGEMGS 155
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A F EM RD SW M+ G GR+ ARKLFD+M ++V +W MI GY+ G +
Sbjct: 156 ARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDL 215
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A LF++M ++DL SWK +++ ++ + AA + F+ MP TWN +IS + G
Sbjct: 216 LEARVLFERMPEKDLASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGCCKAG 275
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+ A + ++ N+ASW +I GY ++G+V +A VF+ M +++ W+ MI G +
Sbjct: 276 EMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAK 335
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
LK + KE G PD +++ CS L D + + + V
Sbjct: 336 TGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQLGVPDTAESVICDFVGPSLFPNLQV 395
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
++I MYA+CGNI+ A+ F V D+ ++++I A HG +E A+ LF M+ +
Sbjct: 396 VTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANI 455
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
KPD + F+GVL+AC++ GLV +GR F M ++Y +QP HY C+VD+LGR G ++EA
Sbjct: 456 KPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAH 515
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
+L+ + + + TVWGALL ACR+H N+++ E A + ++EPNNSG Y++L +Y
Sbjct: 516 SLICSMP---VAPNATVWGALLSACRVHLNVQLAEAAATELFQIEPNNSGNYVLLFNIYA 572
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
G+ +D ++ A ++EN V+K G SWI++ H F+ GD SH R+ ++L LL
Sbjct: 573 DAGQWDDFSKVRAMIRENRVRKNRGSSWIELGSVIHEFVMGDKSHFDSERIFFMLELL 630
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 222/431 (51%), Gaps = 29/431 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MR + A+ +FD+M +RD V+WN MI GY NG +D A LF++M ER++ ++ ++I
Sbjct: 148 MRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMIQ 207
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +++ ++ A+ +F+ M +D+ +W M+S Y+ G + A +F MP+ DV +WNL+
Sbjct: 208 GYVKAGDLLEARVLFERMPEKDLASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLM 267
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I MD A+ +F M R+VASW ++++G ++ G + AR +FD+MP K++ AW+
Sbjct: 268 ISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQMPEKNLVAWS 327
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MI GY G + L++ ++ + + G++ +A S +P+T E
Sbjct: 328 TMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGII------SACSQLG-VPDTAE-- 378
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
S+I + L + N+ T++I Y + G + A++VFE++ +D+
Sbjct: 379 --SVICDFVGPSL------------FPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDL 424
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
++ +I + L E+ + F +M+++ PD F VLT C+ + GR++ Q
Sbjct: 425 HCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQ 484
Query: 361 AIKIARNQFTTVSNA-MITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAE 418
I Q + A M+ + R G ++ A S+P+ + W +++ H +
Sbjct: 485 MIDEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNATVWGALLSACRVHLNVQ 544
Query: 419 ----KALELFE 425
A ELF+
Sbjct: 545 LAEAAATELFQ 555
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 207/643 (32%), Positives = 346/643 (53%), Gaps = 54/643 (8%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ Y K GF +A LFN+MP + F++NT+++G + ++ A +VFD + VRD V
Sbjct: 14 NNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSV 73
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI-GALVNCQRM------DLAESYF 137
+W ++I GY G ++A+++F M V+ + L +C S+
Sbjct: 74 SWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFV 133
Query: 138 KEMGARD-VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
++G V ++N + G + A+ +FD+M ++ +WN MI+ +++ G V +A
Sbjct: 134 VKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLAL 193
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF-------------------------- 230
F+ + +RD+ SW +I G + A+ +F
Sbjct: 194 AQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANL 253
Query: 231 --------------KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN--IASWTN 274
+ M + N++IS+ ++G V+ A +E+ S+ + ++T
Sbjct: 254 EKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTA 313
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ GY ++G++ A ++F + DV W MI G +N L + ++ F M GP P+
Sbjct: 314 LLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPN 373
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ T ++L+ S + +L+ G+QIHA AI+ +V NA+ TMYA+ G+I A F+
Sbjct: 374 SFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFN 433
Query: 395 SVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ + D +SW S+I LA HG E+A+ELFE+M KPD IT+VGVLSAC++ GLV+
Sbjct: 434 LLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVE 493
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
QGR YFD MKN + + P +HY C+VDL GR GL+ EA + + +E WG+L
Sbjct: 494 QGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMP---MEPDVIAWGSL 550
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
L +C+++ N+ + ++A ER++ +EPNNSG Y L +Y SCG+ +DA +I MK GVK
Sbjct: 551 LSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVK 610
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
KE G SW+QI + HVF D HP+ + +++ + EI++
Sbjct: 611 KEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKK 653
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 205/458 (44%), Gaps = 65/458 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ ++ A+ +FD+M R+T +WN MI + G +D A+ F + ERD+ ++N++IAG
Sbjct: 154 KTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAG 213
Query: 62 LMQSDNVQGAKEVFDGMEVRDV---------------------VTWNSMISGYVCNGLID 100
Q A + F + ++D +++ I GY+ + D
Sbjct: 214 CNQHGFDNEALQFFSSI-LKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFD 272
Query: 101 EALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR--DVASWTIMVNGLVRE 158
+ V N +I +++A ++ G DV ++T ++NG V+
Sbjct: 273 ASGAV-----------GNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKL 321
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G I AR++F+ + DV AW MI GY+ NG A ++F+ M + ++
Sbjct: 322 GDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAML 381
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
++ ++++ KQ+ + IR+G EA S S N +
Sbjct: 382 SASSSVTSLNHGKQIHASA-----------IRSG---EALS----------PSVGNALTT 417
Query: 279 -YFEMGEVGSAIKVFELM-TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A KVF L+ RD W MI L ++ LGEE ++ F QM G PD+
Sbjct: 418 MYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHI 477
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFS 394
T+ VL+ C+ ++ GR + +K T+S+ M+ ++ R G +Q A
Sbjct: 478 TYVGVLSACTHGGLVEQGRS-YFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVE 536
Query: 395 SVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTD 431
++P+ D+I+W S++ + + A ER+ L +
Sbjct: 537 NMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIE 574
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 186/444 (41%), Gaps = 44/444 (9%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PERDMF 53
M R+ A F+ + +RD V+WN MI G ++GF + A+ F+ + P+R F
Sbjct: 184 MNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDR--F 241
Query: 54 TYNTVIAGLMQSDNVQGAKEVFDGMEVRDV-----VTWNSMISGYVCNGLIDEALRVFH- 107
+ + ++ + + K++ G VR + N++IS Y +G ++ A R+
Sbjct: 242 SLASALSACANLEKLSFGKQIH-GYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQ 300
Query: 108 -GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARK 166
G+ DV+++ ++ V + A F + DV +WT M+ G V+ G +A +
Sbjct: 301 SGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIE 360
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR----- 221
+F M ++ + + +A L + + +++H + S + L + N+
Sbjct: 361 VFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYA 420
Query: 222 ---RIDAAISYFKQMPETCEK-TWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWT 273
I+ A F + + + +W S+I L ++GL +EA E+ I ++
Sbjct: 421 KAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYV 480
Query: 274 NVIVGYFEMGEVGSAIKVFELMTT-----RDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
V+ G V F+LM ++ + M+ G L +E KF M
Sbjct: 481 GVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPM 540
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
PD + S+L+ C +DL + + + I N S A+ +Y+ CG
Sbjct: 541 ---EPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYS-ALANVYSSCGKWDD 596
Query: 389 A-----LLEFSSVPIHDIISWNSI 407
A L++ V +SW I
Sbjct: 597 AAKIRKLMKARGVKKEQGLSWVQI 620
>gi|255587181|ref|XP_002534168.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525755|gb|EEF28217.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 513
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 175/442 (39%), Positives = 271/442 (61%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MRN + A +F+ MP+R TVT+N MI GY NG D A +F++MPERD+FT+N +++
Sbjct: 68 MRNGQCHSALQVFNTMPRRSTVTYNAMISGYLSNGRFDLAREMFDKMPERDLFTWNVMLS 127
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +++ N+ A+ +F+ M RDVV+WN+M+SGY NG I EA +F MP+K+ +SWN +
Sbjct: 128 GYVRNKNLTDARGLFERMPRRDVVSWNAMLSGYAQNGFIAEAREIFDEMPVKNSISWNGL 187
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A V R++ A F+ DV SW ++ G V++ R+V+AR++FD++P +D +WN
Sbjct: 188 LAAYVQNGRIEDARRLFESKMDWDVVSWNCLMGGFVKKKRLVDARRVFDRIPVRDEVSWN 247
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MI GY NG + A LF++ +D+ +W +++G V + +D A S F +MPE +
Sbjct: 248 TMITGYAQNGELEEARKLFEESPTQDVFTWTAMVSGYVQNGMVDEARSIFDKMPEKNSVS 307
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WN++I+ ++ + A E P+ NI+SW +I GY + G V A +F+ M RD
Sbjct: 308 WNAMIAGYVQCKRMDMAKELFEAMPFRNISSWNTMITGYAQSGNVPHARNLFDRMPQRDS 367
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W+ MI G +N EE + +V+MK G S + ++FTSVLT C+D+ LDLG+Q H
Sbjct: 368 ISWSAMIAGYVQNGCNEEAVHLYVEMKRDGESLNRSSFTSVLTACADIAALDLGKQFHGW 427
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
+K+ V NA++ MY +CG+I A F + D+ISWN++I G A HG+ ++A
Sbjct: 428 LVKVGYQTGCYVGNALLAMYCKCGSIDEADDAFHEITDKDLISWNTMIYGYARHGFGKEA 487
Query: 421 LELFERMRLTDFKPDDITFVGV 442
L +FE M+ KPD+ T V V
Sbjct: 488 LIVFESMKTVGVKPDEATMVTV 509
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 225/452 (49%), Gaps = 44/452 (9%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+ D+ +N I M++ A +VF+ M R VT+N+MISGY+ NG D A +F
Sbjct: 54 DSDIVNWNMAITTHMRNGQCHSALQVFNTMPRRSTVTYNAMISGYLSNGRFDLAREMFDK 113
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
MP +D+ +WN+++ V + + A F+ M RDV SW M++G + G I EAR++F
Sbjct: 114 MPERDLFTWNVMLSGYVRNKNLTDARGLFERMPRRDVVSWNAMLSGYAQNGFIAEAREIF 173
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
D+MP K+ +WN ++A Y+ NG + A LF+ D D+ SW L+ G V +R+ A
Sbjct: 174 DEMPVKNSISWNGLLAAYVQNGRIEDARRLFESKMDWDVVSWNCLMGGFVKKKRLVDARR 233
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
F ++P E +WN++I+ +NG ++EA E+ P ++ +WT ++ GY + G V A
Sbjct: 234 VFDRIPVRDEVSWNTMITGYAQNGELEEARKLFEESPTQDVFTWTAMVSGYVQNGMVDEA 293
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+F+ M ++ WN MI G +VQ K
Sbjct: 294 RSIFDKMPEKNSVSWNAMIAG-------------YVQCKR-------------------- 320
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVS--NAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
+D+ +++ F +S N MIT YA+ GN+ A F +P D ISW++
Sbjct: 321 --MDMAKELFEAM------PFRNISSWNTMITGYAQSGNVPHARNLFDRMPQRDSISWSA 372
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
+I G +G E+A+ L+ M+ + +F VL+AC+ +D G+ + + K
Sbjct: 373 MIAGYVQNGCNEEAVHLYVEMKRDGESLNRSSFTSVLTACADIAALDLGKQFHGWLV-KV 431
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
Q ++ + + G IDEA + +EI
Sbjct: 432 GYQTGCYVGNALLAMYCKCGSIDEADDAFHEI 463
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 216/459 (47%), Gaps = 51/459 (11%)
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
D+V+WN+ I + + A F M R ++ M++G + GR AR++FDKMP
Sbjct: 56 DIVNWNMAITTHMRNGQCHSALQVFNTMPRRSTVTYNAMISGYLSNGRFDLAREMFDKMP 115
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+D+ WN+M++GY+ N + A LF++M RD+ SW +++G + I A F +
Sbjct: 116 ERDLFTWNVMLSGYVRNKNLTDARGLFERMPRRDVVSWNAMLSGYAQNGFIAEAREIFDE 175
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
MP +WN +++ ++NG +++A E ++ SW ++ G+ + + A +VF
Sbjct: 176 MPVKNSISWNGLLAAYVQNGRIEDARRLFESKMDWDVVSWNCLMGGFVKKKRLVDARRVF 235
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ + RD WN MI G +N EE K F E P+ D T+T++++ +D
Sbjct: 236 DRIPVRDEVSWNTMITGYAQNGELEEARKLF----EESPTQDVFTWTAMVSGYVQNGMVD 291
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
R I + + + + NAMI Y +C + A F ++P +I SWN++I G A
Sbjct: 292 EARSIFDKMPE----KNSVSWNAMIAGYVQCKRMDMAKELFEAMPFRNISSWNTMITGYA 347
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
G A LF+RM + D I++ ++ AG V G
Sbjct: 348 QSGNVPHARNLFDRMP----QRDSISWSAMI-----AGYVQNG----------------- 381
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
+EA++L E++ DG ++ + + ++L AC + +G+
Sbjct: 382 --------------CNEEAVHLYVEMKRDGESLNRSSFTSVLTACADIAALDLGKQFHGW 427
Query: 533 VMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQMKE 569
++++ +G Y+ L MY CG ++A F ++ +
Sbjct: 428 LVKV-GYQTGCYVGNALLAMYCKCGSIDEADDAFHEITD 465
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 161/373 (43%), Gaps = 26/373 (6%)
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
+K D D+ +W I + + + +A+ F MP T+N++IS + NG A
Sbjct: 50 EKTTDSDIVNWNMAITTHMRNGQCHSALQVFNTMPRRSTVTYNAMISGYLSNGRFDLARE 109
Query: 260 YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+K P ++ +W ++ GY + A +FE M RDV WN M+ G +N E
Sbjct: 110 MFDKMPERDLFTWNVMLSGYVRNKNLTDARGLFERMPRRDVVSWNAMLSGYAQNGFIAEA 169
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMIT 378
+ F +M P ++ ++ +L + GR A+ + ++ + VS N ++
Sbjct: 170 REIFDEM----PVKNSISWNGLLA-----AYVQNGRIEDARRLFESKMDWDVVSWNCLMG 220
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
+ + + A F +P+ D +SWN++I G A +G E+A +LFE D T
Sbjct: 221 GFVKKKRLVDARRVFDRIPVRDEVSWNTMITGYAQNGELEEARKLFEESPTQDV----FT 276
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
+ ++S G+VD+ R FD M K S + ++ + +D A L +
Sbjct: 277 WTAMVSGYVQNGMVDEARSIFDKMPEK-----NSVSWNAMIAGYVQCKRMDMAKELFEAM 331
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
I + W ++ N+ +R + +S + + Y+ G E
Sbjct: 332 PFRNI----SSWNTMITGYAQSGNVPHARNLFDR---MPQRDSISWSAMIAGYVQNGCNE 384
Query: 559 DAKRIFAQMKENG 571
+A ++ +MK +G
Sbjct: 385 EAVHLYVEMKRDG 397
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 217/638 (34%), Positives = 328/638 (51%), Gaps = 66/638 (10%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF--DGMEVRD 82
N +I Y K+ L +A LF+++ + D+ T+IA + N A+E+F + +RD
Sbjct: 54 NRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRD 113
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALV-------NCQR-- 129
V +N+MI+GY N A+ +F + D ++ V+GAL CQ+
Sbjct: 114 TVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIH 173
Query: 130 ------------------------------------MDLAESYFKEMGARDVASWTIMVN 153
M A F EM RD SWT M+
Sbjct: 174 CAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIA 233
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTS 209
G VR G + AR+ D M K V AWN MI+GY+ +G A ++F+KM+ D +
Sbjct: 234 GYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFT 293
Query: 210 WKQLINGLVNS------RRIDAAISYFKQMP--ETCEKTWNSIISVLIRNGLVKEAHSYL 261
+ +++ N+ +++ A I + P + N++ ++ + G V EA
Sbjct: 294 YTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVF 353
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
+ P ++ SW ++ GY G + A FE M R++ W VMI GL +N GEE LK
Sbjct: 354 NQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLK 413
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F +MK G P + F + C+ L L GRQ+HAQ +++ + + NA+ITMYA
Sbjct: 414 LFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYA 473
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CG +++A F ++P D +SWN++I L HG+ +ALELFE M D PD ITF+
Sbjct: 474 KCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLT 533
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
VLS CS+AGLV++G YF M Y + P HY ++DLL R G EA +++ +
Sbjct: 534 VLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMP-- 591
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
+E P +W ALL CRIH N+ +G A ER+ EL P + G Y++L+ MY + GR +D
Sbjct: 592 -VEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVA 650
Query: 562 RIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
++ M++ GVKKEPGCSWI++ + HVFL D HP+
Sbjct: 651 KVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPE 688
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 201/452 (44%), Gaps = 90/452 (19%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYN 56
+RN + A+ D M ++ V WN MI GY +GF A+ +F +M + D FTY
Sbjct: 236 VRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYT 295
Query: 57 TVIAGLMQSDNVQGAKEVFDGM---EVRDVVTW-----NSMISGYVCNGLIDEALRVFHG 108
+V++ + K+V + E R + + N++ + Y G +DEA +VF+
Sbjct: 296 SVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQ 355
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
MP+KD+VSWN ++ VN R+D A+S+F+EM R++ +WT+M++GL + G E+ KLF
Sbjct: 356 MPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLF 415
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
++M ++ + + AG + C +A MH R L + QL+ D+++S
Sbjct: 416 NRMKSEGFEPCDYAFAGAII-ACAWLA----ALMHGRQLHA--QLVR-----LGFDSSLS 463
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
N++I++ + G+V+ AH PY + SW +I + G A
Sbjct: 464 -----------AGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQA 512
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+++FELM D+ PD TF +VL+ CS
Sbjct: 513 LELFELMLKEDIL-------------------------------PDRITFLTVLSTCS-- 539
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSN------------AMITMYARCGNIQSALLEFSSV 396
HA ++ F ++S MI + R G A ++
Sbjct: 540 ---------HAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETM 590
Query: 397 PIHDIIS-WNSIICGLAYHGYAEKALELFERM 427
P+ W +++ G HG + ++ ER+
Sbjct: 591 PVEPGPPIWEALLAGCRIHGNMDLGIQAAERL 622
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 180/467 (38%), Positives = 281/467 (60%), Gaps = 8/467 (1%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
M++G +R + AR LFDKMP +D+ +WN+M+ GY+ N + A LF++M +RD+ SW
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSW 60
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
+++G + +D A F +MP +WN +++ ++NG +++A E +
Sbjct: 61 NAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLV 120
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
SW N ++G F V +F+ M RD W+ MI G +N EE L FFV+M+
Sbjct: 121 SW-NCLMGGF----VRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDC 175
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
+ ++FT L+ CS++ L+LGRQ+H + +K V NA++ MY +CG+I A
Sbjct: 176 ERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEAR 235
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F + D++SWN++I G A HG+ E+AL +FE M+ T +PDD T V VL+ACS+AG
Sbjct: 236 DAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAG 295
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
LVDQG YF M Y + + HYTC+VDLLGR G ++EA NL+ + E W
Sbjct: 296 LVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNM---PFEPDAATW 352
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
GALLGA RIH N ++GE A + + E+EP+NSG+Y++L+++Y + GR DA ++ +M+
Sbjct: 353 GALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNK 412
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
GVKK PG SW+++ + H F GD+SHP ++ L + ++++E
Sbjct: 413 GVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQE 459
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 198/398 (49%), Gaps = 38/398 (9%)
Query: 27 MIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
MI GY +N D A LF++MPERD+F++N ++ G +++ +++ A+ +F+ M RD+V+W
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSW 60
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA 146
N+M+SGY NG +DEA +F+ MPLK+ +SWN ++ A V R++ A+ F+ +
Sbjct: 61 NAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLV 120
Query: 147 SWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRD 206
SW ++ G VR + R LFD MP +D +W+ MIAGY NGC A F +M RD
Sbjct: 121 SWNCLMGGFVR-----KRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQ-RD 174
Query: 207 LTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
+N A+S TC S I+ L L ++ H L K Y
Sbjct: 175 CER--------LNRSSFTCALS-------TC-----SNIAAL---ELGRQLHCRLVKAGY 211
Query: 267 SNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
N ++ Y + G + A F+ + +DV WN MI G + GEE L F
Sbjct: 212 QTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFEL 271
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS----NAMITMYA 381
MK +G PD+AT SVL CS +D G + + R+ T M+ +
Sbjct: 272 MKTTGIRPDDATMVSVLAACSHAGLVDQGSEYF---YSMNRDYGITAKLVHYTCMVDLLG 328
Query: 382 RCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAE 418
R G ++ A ++P D +W +++ HG E
Sbjct: 329 RAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTE 366
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 179/397 (45%), Gaps = 66/397 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+RN + A++LFDKMP+RD +WNVM+ GY +N L A LF +MPERD+ ++N +++
Sbjct: 6 LRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLS 65
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G Q+ V A+E+F M +++ ++WN +++ YV NG I++A R+F +VSWN +
Sbjct: 66 GYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCL 125
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM--------- 171
+G V +R + F M RD SW+ M+ G + G EA F +M
Sbjct: 126 MGGFVRKRR-----NLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNR 180
Query: 172 ---------------------------PAKDVQAW---NLMIAGYLDNGCVGVAEDLFQK 201
A W N ++A Y G + A D FQ+
Sbjct: 181 SSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQE 240
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLVKEA 257
+ ++D+ SW +I+G + A++ F+ M T + T S+++ GLV +
Sbjct: 241 ILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQG 300
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEM----GEVGSAIKVFELMTTR----DVTVWNVMIFG 309
Y Y + T +V Y M G G + LM D W ++
Sbjct: 301 SEYF--YSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGA 358
Query: 310 ---LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
G +LGE+ + +M+ P N+ +L+
Sbjct: 359 SRIHGNTELGEKAAQIIFEME-----PHNSGMYILLS 390
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 210/643 (32%), Positives = 349/643 (54%), Gaps = 54/643 (8%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ Y K GF+ +A +F++MP + +F++N +++G + ++ A VF+ M D V
Sbjct: 52 NNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSV 111
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI-GALVNCQRMD---LAESYFKEM 140
+W +MI GY G + A+ +F M DV + L +C ++ + +
Sbjct: 112 SWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFV 171
Query: 141 GARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
++S+ + N L+ + G V A+ +FD+M K +WN MI+ ++ +G V +A+
Sbjct: 172 VKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQ 231
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-------PE-------------- 235
F++M +RD+ SW +I+G A+ F +M P+
Sbjct: 232 VQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANL 291
Query: 236 -------------------TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN--IASWTN 274
T N++IS+ ++G V+ A +E+ SN + ++T
Sbjct: 292 ENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTA 351
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ GY ++G++ A ++F+ + RDV W MI G +N ++ ++ F M + GP P+
Sbjct: 352 LLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPN 411
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
N T ++L++ S L +LD GRQIHA A + +VSNA+ITMYA+ G+I A F+
Sbjct: 412 NYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFN 471
Query: 395 SVP-IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ D I+W S+I LA HG E+AL LFERM KPD IT+VGVLSAC++ GLV+
Sbjct: 472 LIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVE 531
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
QGR Y++ M+N + + P +HY C++DL GR GL+ EA + + IE WG+L
Sbjct: 532 QGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENM---PIEPDVIAWGSL 588
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
L +C++H N+++ E+A ER++ +EP NSG Y L +Y +CG+ E+A I MK+ GVK
Sbjct: 589 LASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVK 648
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
K+ G SW+QI + H+F D HP+ + ++ + EI++
Sbjct: 649 KDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKK 691
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 216/511 (42%), Gaps = 110/511 (21%)
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
V N++++ Y G I +A RVF MP+K V SWN+++ R++ A F+EM
Sbjct: 48 VFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPE 107
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN----GCVGVAEDL 198
D SWT M+ G + G+ A +F +M + DV + L + C+G+ +
Sbjct: 108 PDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKV 167
Query: 199 FQKMHDRDLTSWKQLINGLVN--SRRIDAAIS--YFKQMPETCEKTWNSIISVLIRNGLV 254
+ L+S+ + N L+N ++ D + F +M +WN++IS +++GLV
Sbjct: 168 HSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLV 227
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
A E+ ++ SW +I GY + G A+ +F M
Sbjct: 228 DLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKM------------------- 268
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
+ +S PD T S L+ C++L L LG+QIHA I+ + F V N
Sbjct: 269 -----------LMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGN 317
Query: 375 AMITMYARCGNIQ-------------------SALLE--------------FSSVPIHDI 401
A+I+MY++ G ++ +ALL+ F S+ + D+
Sbjct: 318 ALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDV 377
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV--------------------- 440
++W ++I G +G+ + A+ELF M KP++ T
Sbjct: 378 VAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHAS 437
Query: 441 --------------GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
+++ + +G ++ R+ F+ + K + +T ++ L + G
Sbjct: 438 ATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKR----DTITWTSMIIALAQHG 493
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
L +EA+ L + +GI+ + +L AC
Sbjct: 494 LGEEALTLFERMLENGIKPDHITYVGVLSAC 524
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 185/418 (44%), Gaps = 33/418 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTY 55
M++ + AQ F++M +RD V+WN MI GY ++GF A+ +F++M + D FT
Sbjct: 222 MQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTL 281
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW----NSMISGYVCNGLIDEALRVFHGMPL 111
+ ++ +N++ K++ + + T+ N++IS Y +G ++ A ++ +
Sbjct: 282 ASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMI 341
Query: 112 K--DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
DV+++ ++ V ++ A F + RDV +WT M+ G V+ G +A +LF
Sbjct: 342 SNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFR 401
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH--------DRDLTSWKQLINGLVNSR 221
M + + N +A L + D +++H ++ LI S
Sbjct: 402 SMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSG 461
Query: 222 RIDAAISYFKQMPETCEK-TWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVI 276
I+ A F + + TW S+I L ++GL +EA + E+ + I ++ V+
Sbjct: 462 SINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVL 521
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTV-----WNVMIFGLGENDLGEEGLKFFVQMKESGP 331
+G V + LM + + MI G L +E F M
Sbjct: 522 SACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMP---I 578
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
PD + S+L C ++L ++ A+ + + + + +A+ +Y+ CG ++A
Sbjct: 579 EPDVIAWGSLLASCKVHKNVELA-EVAAERLLLIEPENSGAYSALANVYSACGQWENA 635
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
SP + +TS L G+ IHA+ IK + + N ++ YA+ G I A
Sbjct: 11 SPSDP-YTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHR 69
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
F +P+ + SWN I+ G A G E+A +FE M +PD +++ ++
Sbjct: 70 VFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMP----EPDSVSWTAMI 117
>gi|297846216|ref|XP_002890989.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336831|gb|EFH67248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 792
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 223/619 (36%), Positives = 345/619 (55%), Gaps = 38/619 (6%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
R+ EA LF +MP ++ V+W VM+ +G D+A+ LF++MPER++ ++NT++ GL++
Sbjct: 153 RLNEAWTLFREMP-KNVVSWTVMLTALCDDGRSDDAVELFDEMPERNVVSWNTLVTGLIR 211
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
+ + AK+VFD M RD V+WN+MI GY+ NG ++EA +F M K+VV+W ++
Sbjct: 212 NGETEKAKQVFDAMPSRDAVSWNAMIKGYIENGGMEEAKLLFENMSEKNVVTWTSMVYGY 271
Query: 125 VNCQRMDLAESY--FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN-- 180
C+ D+ E+Y F EM R+V SWT M++G EA LF +M KDV A +
Sbjct: 272 --CRYGDVHEAYRLFCEMPERNVVSWTAMISGFAWNEFYREALMLFLEMK-KDVDAISPN 328
Query: 181 --LMIAGYLDNGCVGVA-EDLFQKMH-----------DRDLTSWKQLINGLVNSRRIDAA 226
+I+ G +GV L +++H D D K L++ + I +A
Sbjct: 329 GETLISLAYACGGLGVGFRRLGEQLHAQVISNGWESVDHDGRLAKSLVHMYASFGLIASA 388
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY-PYSNIASWTNVIVGYFEMGEV 285
S + + ++ N IIS ++NG + A + + + SWT++I GY + G+V
Sbjct: 389 QSLLNESFDL--QSCNIIISAYLKNGDFERAETLFRRVESLHDKVSWTSMIDGYLDAGDV 446
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A +F+ + +D W VMI GL +N+L E M G P N+T++ +L+
Sbjct: 447 SRAFDLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSA 506
Query: 346 SDLPTLDLGRQIHAQAIKIAR--NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
LD G+ +H K + + N++++MYA+CG I A FS + DI+S
Sbjct: 507 GATSNLDQGKHLHCVIAKTTACYDPDLILQNSLVSMYAKCGAIDDAYEIFSKMVRKDIVS 566
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
WNS+I GL++HG A+KAL+LF+ M + KP+ +TF+GVLSACS++GL+ +G F MK
Sbjct: 567 WNSVIIGLSHHGLADKALKLFKEMLDSGMKPNSVTFLGVLSACSHSGLITKGLELFKAMK 626
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP--TVWGALLGAC---- 517
Y +QP HY ++DLLGR G + EA ++ + +P TV+GALLG C
Sbjct: 627 ETYSIQPGVEHYISMIDLLGRAGKLKEAEEFIS-----ALPFTPDHTVYGALLGLCGLNW 681
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
R + + E A R++EL+P N+ ++ L MY GR E K + +M GVKK PG
Sbjct: 682 RDRDAAGIAERAAMRLLELDPVNAPGHVALCNMYAGLGRHEMEKEMRKEMGIKGVKKTPG 741
Query: 578 CSWIQINDGGHVFLSGDSS 596
CSW+ +N +VFLSGD S
Sbjct: 742 CSWVVVNGRANVFLSGDKS 760
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 156/521 (29%), Positives = 248/521 (47%), Gaps = 82/521 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+RN ++A+ +FD MP RD V+WN MI+GY +NG ++ A LF M E+++ T+ +++
Sbjct: 210 IRNGETEKAKQVFDAMPSRDAVSWNAMIKGYIENGGMEEAKLLFENMSEKNVVTWTSMVY 269
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV------ 114
G + +V A +F M R+VV+W +MISG+ N EAL +F M KDV
Sbjct: 270 GYCRYGDVHEAYRLFCEMPERNVVSWTAMISGFAWNEFYREALMLFLEMK-KDVDAISPN 328
Query: 115 ----VSWNLVIGAL-VNCQRMD--------------------LAESY---FKEMG----- 141
+S G L V +R+ LA+S + G
Sbjct: 329 GETLISLAYACGGLGVGFRRLGEQLHAQVISNGWESVDHDGRLAKSLVHMYASFGLIASA 388
Query: 142 ------ARDVASWTIMVNGLVREGRIVEARKLFDKMPA-KDVQAWNLMIAGYLDNGCVGV 194
+ D+ S I+++ ++ G A LF ++ + D +W MI GYLD G V
Sbjct: 389 QSLLNESFDLQSCNIIISAYLKNGDFERAETLFRRVESLHDKVSWTSMIDGYLDAGDVSR 448
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A DLFQK+HD+D +W +I+GLV + A S M K NS SVL+ +
Sbjct: 449 AFDLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSA-- 506
Query: 255 KEAHSYLE--KYPYSNIASWT-----------NVIVGYFEMGEVGSAIKVFELMTTRDVT 301
A S L+ K+ + IA T +++ Y + G + A ++F M +D+
Sbjct: 507 -GATSNLDQGKHLHCVIAKTTACYDPDLILQNSLVSMYAKCGAIDDAYEIFSKMVRKDIV 565
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN +I GL + L ++ LK F +M +SG P++ TF VL+ CS + G ++ +A
Sbjct: 566 SWNSVIIGLSHHGLADKALKLFKEMLDSGMKPNSVTFLGVLSACSHSGLITKGLELF-KA 624
Query: 362 IKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPI---HDIISWNSIICGLAYH-- 414
+K + V + +MI + R G ++ A S++P H + +CGL +
Sbjct: 625 MKETYSIQPGVEHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDR 684
Query: 415 ---GYAEKALELFERMRLTDFKPDDITFVGVLSACS-YAGL 451
G AE+A MRL + P + G ++ C+ YAGL
Sbjct: 685 DAAGIAERA-----AMRLLELDP--VNAPGHVALCNMYAGL 718
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 141/508 (27%), Positives = 237/508 (46%), Gaps = 72/508 (14%)
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKE 139
+ V+ S+++ Y G +DEA +F MP +++V+ N ++ V C+R++ A + F+E
Sbjct: 104 ISRVIYCTSLLTKYAKAGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRLNEAWTLFRE 163
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
M ++V SWT+M+ L +GR +A +LFD+MP ++V +WN ++ G + NG A+ +F
Sbjct: 164 M-PKNVVSWTVMLTALCDDGRSDDAVELFDEMPERNVVSWNTLVTGLIRNGETEKAKQVF 222
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
M RD SW +I G + + ++ A F+ M E TW S++ R G V EA+
Sbjct: 223 DAMPSRDAVSWNAMIKGYIENGGMEEAKLLFENMSEKNVVTWTSMVYGYCRYGDVHEAYR 282
Query: 260 YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+ P N+ SWT +I G+ W N+ E
Sbjct: 283 LFCEMPERNVVSWTAMISGF----------------------AW---------NEFYREA 311
Query: 320 LKFFVQMKE--SGPSPDNATFTSVLTICSDLPT--LDLGRQIHAQAIKIARNQFTTV--- 372
L F++MK+ SP+ T S+ C L LG Q+HAQ I N + +V
Sbjct: 312 LMLFLEMKKDVDAISPNGETLISLAYACGGLGVGFRRLGEQLHAQVIS---NGWESVDHD 368
Query: 373 ---SNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
+ +++ MYA G I SA LL S D+ S N II +G E+A LF R+
Sbjct: 369 GRLAKSLVHMYASFGLIASAQSLLNES----FDLQSCNIIISAYLKNGDFERAETLFRRV 424
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
+ D +++ ++ AG V + F + +K +T ++ L + L
Sbjct: 425 ---ESLHDKVSWTSMIDGYLDAGDVSRAFDLFQKLHDK-----DGVTWTVMISGLVQNEL 476
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE----IAGERVMELEPN---- 539
EA +LL+++ G++ + + LL + +N+ G+ + + +P+
Sbjct: 477 FAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHLHCVIAKTTACYDPDLILQ 536
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQM 567
NS L MY CG +DA IF++M
Sbjct: 537 NS-----LVSMYAKCGAIDDAYEIFSKM 559
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 209/618 (33%), Positives = 336/618 (54%), Gaps = 31/618 (5%)
Query: 7 QEAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
EA+ LFD +P +R+ TWN ++ Y K+G L +A +F QMPERD ++ ++ GL +
Sbjct: 81 HEARRLFDDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNR 140
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEAL---RVFHGMPLKDVVS----- 116
+ A + F M + M++ + + EA R H +K +S
Sbjct: 141 AGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPV 200
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
N V+ C + A + F+ M R +SW MV+ +GR+ A +F+ M + +
Sbjct: 201 ANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSI 260
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKM-----HDRDLTSWKQLINGLVNSRRIDAAI---S 228
+WN +IAGY NG +A F +M + D + +++ N R + S
Sbjct: 261 VSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHS 320
Query: 229 YFKQ--MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS--NIASWTNVIVGYFEMGE 284
Y + MP + + N++IS ++G V+ A ++K + N+ S+T ++ GY ++G+
Sbjct: 321 YILRTGMPYS-SQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGD 379
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
A +VF++M RDV W MI G +N +E ++ F M SGP P++ T +VL+
Sbjct: 380 TKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSA 439
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIIS 403
C+ L L G+QIH +AI+ + Q +VSNA+IT+YAR G++ A F + + ++
Sbjct: 440 CASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVT 499
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
W S+I LA HG E+A+ LFE M KPD +T++GV SAC++AG +D+G+ Y++ M
Sbjct: 500 WTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQML 559
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP--TVWGALLGACRIHN 521
N++ + P +HY C+VDLL R GL+ EA + + V+P VWG+LL ACR+
Sbjct: 560 NEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQR-----MPVAPDTVVWGSLLAACRVRK 614
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
N + E+A E+++ ++P+NSG Y L +Y +CGR DA RI+ K+ VKKE G SW
Sbjct: 615 NADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWT 674
Query: 582 QINDGGHVFLSGDSSHPK 599
+ HVF + D HP+
Sbjct: 675 HVQSKVHVFGADDVLHPQ 692
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 180/418 (43%), Gaps = 76/418 (18%)
Query: 156 VREGRIVEARKLFDKMP--AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL 213
V G EAR+LFD +P ++ WN +++ Y +G + A +F +M +RD SW +
Sbjct: 75 VGRGCFHEARRLFDDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVM 134
Query: 214 INGLVNSRRIDAAISYFKQMP--------------------------------------- 234
+ GL + R A+ F M
Sbjct: 135 VVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGL 194
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFEL 294
+C NS++ + + G + A + E+ + +SW ++ Y G + A+ +FE
Sbjct: 195 SSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFEN 254
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDL 353
M R + WN +I G +N L + LKFF +M S PD T TSVL+ C++L L +
Sbjct: 255 MEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKM 314
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ-------------------SALLE-- 392
G+Q+H+ ++ + + NA+I+ YA+ G+++ +ALLE
Sbjct: 315 GKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGY 374
Query: 393 ------------FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
F + D+I+W ++I G +G ++A+ELF M + +P+ T
Sbjct: 375 VKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLA 434
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
VLSAC+ + G+ C + + + ++ + R G + A + ++I
Sbjct: 435 AVLSACASLAYLGYGK-QIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQI 491
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 192/467 (41%), Gaps = 88/467 (18%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVI 59
R+ A ++F+ M +R V+WN +I GY +NG D A+ F++M E D FT +V+
Sbjct: 244 RMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVL 303
Query: 60 AGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
+ ++ K++ GM + N++IS Y +G ++ A R+ + D+
Sbjct: 304 SACANLRMLKMGKQMHSYILRTGMPYSSQIM-NALISTYAKSGSVETARRIMDKAVVADL 362
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
+V S+T ++ G V+ G +AR++FD M +
Sbjct: 363 -----------------------------NVISFTALLEGYVKLGDTKQAREVFDVMNNR 393
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
DV AW MI GY NG A +LF+ M + P
Sbjct: 394 DVIAWTAMIVGYEQNGQNDEAMELFRSM---------------------------IRSGP 426
Query: 235 ETCEKTWNSIISV---LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIK 290
E T +++S L G K+ H + S +N I+ Y G V A +
Sbjct: 427 EPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARR 486
Query: 291 VFELMTTRDVTV-WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
VF+ + R TV W MI L ++ LGE+ + F +M G PD T+ V + C+
Sbjct: 487 VFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAG 546
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLEFSSVPIH-DIIS 403
+D G++ + Q + N+ V M+ + AR G + A +P+ D +
Sbjct: 547 FIDKGKRYYEQML----NEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVV 602
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDD----ITFVGVLSAC 446
W S++ A+ A E++ D PD+ V SAC
Sbjct: 603 WGSLLAACRVRKNADLAELAAEKLLSID--PDNSGAYSALANVYSAC 647
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 198/606 (32%), Positives = 323/606 (53%), Gaps = 34/606 (5%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLMQ 64
A +FD++ Q + W +I GY +N D A LF QM + FT ++V+ L +
Sbjct: 54 AHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALAR 113
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
+G + V+ G+V +G D++ N V+
Sbjct: 114 LTRFKGGQAVY----------------GFVLK----------YGFAF-DLIVQNSVLDLF 146
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
+ C+++D A F EM +D+ SW +M++G R+ ARK FD+MP ++V +W MI
Sbjct: 147 MRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMIC 206
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI 244
GY+ G + A+ LF M +DL SW +++G ++ A F +MP +WN +
Sbjct: 207 GYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNIM 266
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
IS + G ++ A + ++ P N+ SW ++ GY + G+ A +F+ M +++ W+
Sbjct: 267 ISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWS 326
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
MI G N + L+ F + KE PD +++ CS L +D I +
Sbjct: 327 TMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGP 386
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+ V ++I MYA+CG+I+ AL F D++ ++++I LA HG A+ LF
Sbjct: 387 SLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLF 446
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
++M+ + KPD +TF+GVL+AC++ GLVD+GR YF M ++ +QP HY CVVDLLGR
Sbjct: 447 DKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGR 506
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G ++EA NL IR I VWGALL ACR+H N+++ E+A + ++EP+NSG Y
Sbjct: 507 VGCLEEAYNL---IRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNY 563
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
++L+ +Y + GR ++ A+++E+ V+K G SWI+++ H F+ GD SH +
Sbjct: 564 ILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSDSIS 623
Query: 605 YLLNLL 610
+L LL
Sbjct: 624 LILYLL 629
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 229/440 (52%), Gaps = 47/440 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MR ++ A+ FD+M ++D V+WN+MI GY N +D A F++MPER++ ++ ++I
Sbjct: 147 MRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMIC 206
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +++ ++ A+ +FD M V+D+ +WN M+SGY+ G A +F MP+ D SWN++
Sbjct: 207 GYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNIM 266
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I ++ A+ +F M ++V SW IM++G ++ G AR LFD+MP K++ W+
Sbjct: 267 ISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWS 326
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR----IDAAISYFKQMPET 236
MI GY NG A +LF++ ++D+ + I G++++ IDAA
Sbjct: 327 TMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAA---------- 376
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
SII H+Y+ S++ +T++I Y + G + A+++FE+
Sbjct: 377 -----ESII------------HNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAH 419
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+D+ ++ MI L + LG + + F +M+ + PD+ TF VLT C+ +D GR+
Sbjct: 420 PKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRK 479
Query: 357 IHAQ-----AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIIC 409
Q I+ + + V + + R G ++ A ++PI H ++ W +++
Sbjct: 480 YFKQMTEEFGIQPSEKHYACV----VDLLGRVGCLEEAYNLIRNMPIAPHSVV-WGALLA 534
Query: 410 GLAYHGYAE----KALELFE 425
H + A ELF+
Sbjct: 535 ACRVHCNVQLAEVAAAELFK 554
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 207/610 (33%), Positives = 344/610 (56%), Gaps = 27/610 (4%)
Query: 10 QNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQ 69
++ +P +T N +I Y K G + A +F+QMP +++++NT+++ + V
Sbjct: 33 SHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVS 92
Query: 70 GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL---------V 120
+ +FD M RD V+WNS+ISGY GLI ++++ ++ M LK+ S+NL +
Sbjct: 93 EMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLM-LKNDGSFNLNRITFSTLLI 151
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDV 176
+ + C + L + S+ + + LV + G I ARK+FD++P K+V
Sbjct: 152 LASKRGCVK--LGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNV 209
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-E 235
+N +I G + G V ++ LF +M +RD SW +I G + AI F++M E
Sbjct: 210 VMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLE 269
Query: 236 TCEKTWNSIISVLIRNGLV------KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSA 288
+ + SVL G V K+ H+Y+ + Y NI + ++ Y + + SA
Sbjct: 270 NLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSA 329
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
VF+ MT ++V W M+ G G+N EE +K F M++ G PD+ T SV++ C++L
Sbjct: 330 EAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANL 389
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
+L+ G Q HA+A+ F TVSNA++T+Y +CG+I+ + F+ + D ++W +++
Sbjct: 390 ASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALV 449
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
G A G A + + LFE M KPD +TF+GVLSACS AGLV++G F+ M N++ +
Sbjct: 450 SGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGI 509
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
P HYTC++DL R G I+EA N +N++ +S W LL +CR + N+ +G+
Sbjct: 510 VPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAIS---WATLLSSCRFYGNMDIGKW 566
Query: 529 AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGH 588
A E +MEL+P+N+ Y++L+ +Y + G+ E+ R+ M++ G++KEPGCSWI+ + H
Sbjct: 567 AAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVH 626
Query: 589 VFLSGDSSHP 598
VF + D S+P
Sbjct: 627 VFSADDKSNP 636
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 119/514 (23%), Positives = 219/514 (42%), Gaps = 105/514 (20%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I A+ +FD++P+++ V +N +I G + G ++++ LF +M ERD ++ ++I G Q+
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253
Query: 66 DNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGL--IDEALRVFHGMPLKDVVSWNL 119
+ A ++F M++ D T+ S+++ C G+ + E +V + D
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTA--CGGVMALQEGKQVHAYIIRTDYKDNIF 311
Query: 120 VIGALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
V ALV+ C+ + AE+ FK+M ++V SWT M+ G + G EA K F M
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371
Query: 176 VQAWNLMIAGYLDNGCVGVAE-DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
++ + + G + + C +A + + H R LTS GL++ +
Sbjct: 372 IEPDDFTL-GSVISSCANLASLEEGAQFHARALTS------GLISFITVS---------- 414
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFEL 294
N+++++ + G ++++H + + + +WT ++ GY + G+ I +FE
Sbjct: 415 -------NALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFES 467
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
M GLK PD TF VL+ CS ++ G
Sbjct: 468 MLA--------------------HGLK-----------PDKVTFIGVLSACSRAGLVEKG 496
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
QI +S + E VPI D + +I +
Sbjct: 497 NQI----------------------------FESMINEHGIVPIQD--HYTCMIDLFSRA 526
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR-SA 473
G E+A +M F PD I++ +LS+C + G +D G++ + + L P +A
Sbjct: 527 GRIEEARNFINKM---PFSPDAISWATLLSSCRFYGNMDIGKWAAEFLME---LDPHNTA 580
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
Y + + G +E L ++R G+ P
Sbjct: 581 SYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEP 614
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 148/333 (44%), Gaps = 57/333 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
MR R+++++ LF +M +RD+++W MI G+ +NG +A+ +F +M + D +T+
Sbjct: 220 MRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFG 279
Query: 57 TVI---AGLM--------------------------------QSDNVQGAKEVFDGMEVR 81
+V+ G+M + N++ A+ VF M +
Sbjct: 280 SVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCK 339
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESYF 137
+VV+W +M+ GY NG +EA++ F M D + VI + N ++ +
Sbjct: 340 NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFH 399
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ S+ + N LV + G I ++ +LF+++ KD W +++GY G
Sbjct: 400 ARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKAN 459
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET---------CEKTWNSI 244
LF+ M L K G++++ + Q+ E+ + + +
Sbjct: 460 ETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCM 519
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIA-SWTNVI 276
I + R G ++EA +++ K P+S A SW ++
Sbjct: 520 IDLFSRAGRIEEARNFINKMPFSPDAISWATLL 552
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 106/235 (45%), Gaps = 12/235 (5%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+ ++L +C + + +H+ IK T + N +I+ YA+ G+I A F +P
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
++ SWN+I+ + G + LF+ M + D +++ ++S + GL+ Q
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMP----RRDGVSWNSLISGYAGCGLIYQSVK 127
Query: 458 YFDCM-KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
++ M KN ++ ++ L + G + + + G + +G+
Sbjct: 128 AYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGF-----MSYVFVGS 182
Query: 517 CRIHNNIKVGEIAGERVM--ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
+ K+G I+ R + EL N +Y L + CGR ED+KR+F +M+E
Sbjct: 183 PLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRE 237
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 210/617 (34%), Positives = 338/617 (54%), Gaps = 29/617 (4%)
Query: 7 QEAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
+EA+ LFD +P +R+ TWN ++ Y K+G L +A +F +MP+RD ++ +I GL +
Sbjct: 265 REARCLFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNR 324
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEAL---RVFHGMPLKDVVS----- 116
S A + F M ++ + + EA R H +K +S
Sbjct: 325 SGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPV 384
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
N V+ C + A + F+ M R V+SW +MV+ +GR+ A +F+ M + +
Sbjct: 385 ANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSI 444
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKM-----HDRDLTSWKQLINGLVNSRRIDAAI---S 228
+WN +IAGY NG G+A F +M + D + +++ N R + S
Sbjct: 445 VSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHS 504
Query: 229 YFKQMPETCE-KTWNSIISVLIRNGLVKEAHSYLEKYPYS--NIASWTNVIVGYFEMGEV 285
Y + C + N++IS ++G V+ A +++ + N+ S+T ++ GY ++G+
Sbjct: 505 YILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDT 564
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A ++F++M RDV W MI G +N +E ++ F M GP P++ T +VL+ C
Sbjct: 565 KQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSAC 624
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISW 404
+ L LD G+QIH +AI+ + Q +VSNA+IT+YAR G++ A F + + I+W
Sbjct: 625 ASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITW 684
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
S+I +A HG E+A+ LFE M KPD IT+VGVLSAC++AG VD+G+ Y++ M+N
Sbjct: 685 TSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQN 744
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP--TVWGALLGACRIHNN 522
++ + P+ +HY C+VDL R GL+ EA + + V+P VWG+LL ACR+ N
Sbjct: 745 EHGIVPQMSHYACMVDLHARAGLLTEAHEFIQR-----MPVAPDTVVWGSLLAACRVRKN 799
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
+ E+A +++ ++P+NSG Y L +Y +CGR DA RI+ K+ GVKKE G SW
Sbjct: 800 ADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTH 859
Query: 583 INDGGHVFLSGDSSHPK 599
+ HVF + D HP+
Sbjct: 860 VRGKVHVFGADDVLHPQ 876
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 182/426 (42%), Gaps = 76/426 (17%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNT 57
R++ A ++F+ M +R V+WN +I GY +NG A+ F++M E D FT +
Sbjct: 426 QGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTS 485
Query: 58 VIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V++ ++ K++ GM + N++IS Y +G ++ A R+ +
Sbjct: 486 VLSACANLRMLKMGKQMHSYILRTGMPCSSQIM-NALISTYAKSGSVETARRIMDQAVVA 544
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
D+ +V S+T ++ G V+ G +AR++FD M
Sbjct: 545 DL-----------------------------NVISFTALLEGYVKLGDTKQAREIFDIMN 575
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+DV AW MI GY NG A +LF+ M LI NS + A +S
Sbjct: 576 NRDVIAWTAMIVGYHQNGQNDEAMELFRSM---------ILIGPEPNSHTLAAVLSACAS 626
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKV 291
+ + G K+ H + S +N I+ Y G V A +V
Sbjct: 627 L-------------AYLDYG--KQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRV 671
Query: 292 FELMTTRDVTV-WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
F+ + R T+ W MI + ++ LGE+ + F +M G PD+ T+ VL+ C+
Sbjct: 672 FDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGF 731
Query: 351 LDLGRQIHAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLEFSSVPIH-DIISW 404
+D G++ + Q +N+ V M+ ++AR G + A +P+ D + W
Sbjct: 732 VDKGKRYYEQ----MQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVW 787
Query: 405 NSIICG 410
S++
Sbjct: 788 GSLLAA 793
>gi|358346115|ref|XP_003637117.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503052|gb|AES84255.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 592
Score = 364 bits (935), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 197/548 (35%), Positives = 326/548 (59%), Gaps = 27/548 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R R+ A+ LFD R+TVTWN MI GY + + A LF++MP RD+ ++N +I+
Sbjct: 49 IRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIIS 108
Query: 61 GLMQ---SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
G S V+ +++FD M RD V+WN++ISGY NG +D+A+ +F MP ++VVS
Sbjct: 109 GYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSC 168
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF----DKMPA 173
N V+ + +D A +F++MG RD AS + +V+GLVR G++ A ++ ++
Sbjct: 169 NAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDE 228
Query: 174 KD--VQAWNLMIAGYLDNGCVGVAEDLF-------------QKMHDRDLTSWKQLINGLV 218
KD V A+N +IAGY G V A +F ++ R++ SW ++ V
Sbjct: 229 KDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYV 288
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+ + +A F +M E +WN++I ++ G ++EA + P ++ SW ++I G
Sbjct: 289 KAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISG 348
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ ++G++ + FE M +++ WN +I G +N+ + ++ F QM+ G PD T
Sbjct: 349 FSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTL 408
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+S+L++ + L L LG+QIH K ++N++ITMY+RCG I A F+ + +
Sbjct: 409 SSILSVSTGLVDLYLGKQIHQFVTKTVVPDLP-INNSLITMYSRCGEIGDARHVFNEMKL 467
Query: 399 H-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ D+I+WN++I G A+HG+A +ALELFERM+ +P ITF+ VL+AC++AGLV++G+
Sbjct: 468 YKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKR 527
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
F+ M N Y ++PR H+ +VD+LGR G + EAM+L+ + ++ VWGALLGAC
Sbjct: 528 QFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNM---PVKPDKAVWGALLGAC 584
Query: 518 RIHNNIKV 525
R+H+N+ +
Sbjct: 585 RVHSNVDL 592
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 198/436 (45%), Gaps = 33/436 (7%)
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
++ L+R GR+ AR LFD ++ WN MI GY+ + A LF +M RD+ SW
Sbjct: 45 ISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWN 104
Query: 212 QLINGLVN---SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
+I+G + SR ++ F MP+ +WN++IS +NG + +A E P N
Sbjct: 105 LIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERN 164
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ S V+ G+ G+V SA+ F M RD + ++ GL N + + V+
Sbjct: 165 VVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGN 224
Query: 329 SGPSPDNATFT--SVLTICSDLPTLDLGRQIHAQAI-----------KIARNQFTTVSNA 375
G D+ + +++ ++ R + + ++ RN + N+
Sbjct: 225 EGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSW--NS 282
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
M+ Y + G++ SA F + D SWN++I G G E+A +LF M + PD
Sbjct: 283 MMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPI----PD 338
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS--AHYTCVVDLLGRFGLIDEAMN 493
+++ ++S S G + + + +F+ M +K + S A Y D G L + M
Sbjct: 339 VLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQ-MQ 397
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM-ELEPNNSGVYLILTEMYL 552
L E R D +S ++ G ++ ++ + + V+ +L NNS L MY
Sbjct: 398 LKGE-RPDRHTLS-SILSVSTGLVDLYLGKQIHQFVTKTVVPDLPINNS-----LITMYS 450
Query: 553 SCGRREDAKRIFAQMK 568
CG DA+ +F +MK
Sbjct: 451 RCGEIGDARHVFNEMK 466
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 220/644 (34%), Positives = 347/644 (53%), Gaps = 56/644 (8%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ Y K G+ +A LF++MP R F++NTV++ + ++ + E FD + RD V
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSV 112
Query: 85 TWNSMISGYVCNGLIDEALRVFHGM------PLKDVVSWNLVIGALVNC-QRMDLAESYF 137
+W +MI GY G +A+R+ M P + ++ L A C + S+
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFI 172
Query: 138 KEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
++G R +V+ ++N + G + A+ +FD+M KD+ +WN MIA ++ G + +A
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAM 232
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRID-AAISYFKQM-------PE---------TC-- 237
F++M +RD+ +W +I+G N R D A+ F +M P+ C
Sbjct: 233 AQFEQMAERDIVTWNSMISGY-NQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACAN 291
Query: 238 -EK---------------------TWNSIISVLIRNGLVKEAHSYLEKYPYSN--IASWT 273
EK N++IS+ R G V+ A +E+ + I +T
Sbjct: 292 LEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFT 351
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++ GY ++G++ A +F+ + RDV W MI G ++ L E + F M P
Sbjct: 352 ALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRP 411
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
++ T ++L++ S L +L G+QIH A+K +VSNA+ITMYA+ G+I SA F
Sbjct: 412 NSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAF 471
Query: 394 SSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
+ D +SW S+I LA HG+AE+ALELFE M + +PD IT+VGV SAC++AGLV
Sbjct: 472 DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLV 531
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+QGR YFD MK+ + P +HY C+VDL GR GL+ EA + ++ IE WG+
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM---PIEPDVVTWGS 588
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LL ACR++ NI +G++A ER++ LEP NSG Y L +Y +CG+ E+A +I MK+ V
Sbjct: 589 LLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRV 648
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
KKE G SWI++ H F D HP+ + + + + EI++
Sbjct: 649 KKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKK 692
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 189/421 (44%), Gaps = 66/421 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PERDMF 53
M+ ++ A F++M +RD VTWN MI GY + G+ A+ +F++M P+R F
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDR--F 280
Query: 54 TYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
T +V++ + + +++ +VT ISG V N LI R
Sbjct: 281 TLASVLSACANLEKLCIGEQIHS-----HIVTTGFDISGIVLNALISMYSR--------- 326
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARD--VASWTIMVNGLVREGRIVEARKLFDKM 171
C ++ A ++ G +D + +T +++G ++ G + EA+ +FD +
Sbjct: 327 -------------CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSL 373
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
+DV AW MI GY +G G A +LF+ M + + +++ A++ + K
Sbjct: 374 KDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGK 433
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
Q+ + K+ I SV + N L I Y + G + SA +
Sbjct: 434 QIHGSAVKS-GEIYSVSVSNAL----------------------ITMYAKAGSITSASRA 470
Query: 292 FELM-TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
F+L+ RD W MI L ++ EE L+ F M G PD+ T+ V + C+
Sbjct: 471 FDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGL 530
Query: 351 LDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNSI 407
++ GRQ + +K T+S+ M+ ++ R G +Q A +PI D+++W S+
Sbjct: 531 VNQGRQ-YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSL 589
Query: 408 I 408
+
Sbjct: 590 L 590
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 97/245 (39%), Gaps = 49/245 (20%)
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQ--------IHAQAIKIARNQFTTVSNAMITMYARC 383
+P + +++L +C++L + + +H + IK + N ++ +Y++
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKT 62
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G A F +P+ SWN+++ A G + + E F+R+ + D +++ ++
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLP----QRDSVSWTTMI 118
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
G + G+Y+ +A+ ++ E+ +GI
Sbjct: 119 -----VGYKNIGQYH-------------------------------KAIRIMGEMMREGI 142
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGRREDAKR 562
E S +L + ++ G+ +++L N V L MY CG AK
Sbjct: 143 EPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKV 202
Query: 563 IFAQM 567
+F +M
Sbjct: 203 VFDRM 207
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 210/611 (34%), Positives = 324/611 (53%), Gaps = 40/611 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
++ R+ +A+ +F +MP+RD V+W VM+ G + G A+ M +
Sbjct: 4 KSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTN 63
Query: 62 LMQSDNVQGAKEVFDGMEVRDVV----------TWNSMISGYVCNGLIDEALRVFHGMPL 111
++ S V A V G +V V NS+++ Y G + A VF MP+
Sbjct: 64 VLSSCAVTQAGAV--GRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
+ V SWN ++ + RMDLAES F+ M R + SW M+ G + G +A KLF +M
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
+ A + + + C + K V++ + ++Y
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQ---------------VHAYILRTEMAYNS 226
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS--NIASWTNVIVGYFEMGEVGSAI 289
Q+ N++IS ++G V+ A +++ + N+ S+T ++ GY ++G++ SA
Sbjct: 227 QVT-------NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAR 279
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
++F +M RDV W MI G +N +E + F M GP P++ T +VL++C+ L
Sbjct: 280 EMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLA 339
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSII 408
LD G+QIH +AI+ Q ++VSNA+ITMYAR G+ A F V + I+W S+I
Sbjct: 340 CLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMI 399
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
LA HG E+A+ LFE M +PD IT+VGVLSACS+AG V++G+ Y+D +KN++ +
Sbjct: 400 VALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQI 459
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
P +HY C+VDLL R GL EA IR +E WG+LL ACR+H N ++ E+
Sbjct: 460 APEMSHYACMVDLLARAGLFSEAQEF---IRRMPVEPDAIAWGSLLSACRVHKNAELAEL 516
Query: 529 AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGH 588
A E+++ ++PNNSG Y + +Y +CGR DA RI+ KE V+KE G SW I H
Sbjct: 517 AAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIH 576
Query: 589 VFLSGDSSHPK 599
VF + D HP+
Sbjct: 577 VFGADDVVHPQ 587
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
M+A+ G + A F+ +P D +SW ++ GL G +A++ M F P T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 439 FVGVLSAC--SYAGLVDQGRYYF 459
VLS+C + AG V + + F
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSF 83
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/619 (33%), Positives = 329/619 (53%), Gaps = 36/619 (5%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ Y K G+ ++A +F++MP+R+ F+YN V++ L + + A VF M D
Sbjct: 58 NRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQC 117
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG-ALVNCQRM-------DLAESY 136
+WN+M+SG+ + +EALR F M +D V G AL C + +
Sbjct: 118 SWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALI 177
Query: 137 FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
K DV + +V+ + G + A++ FD M +++ +WN +I Y NG G A
Sbjct: 178 SKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKAL 237
Query: 197 DLFQKMHDRDL--------------TSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN 242
++F M D + SW + GL R+ Y + N
Sbjct: 238 EVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLV-----LGN 292
Query: 243 SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
+++ + + V EA ++ P N+ S T+++ GY V +A +F M ++V
Sbjct: 293 ALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVS 352
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
WN +I G +N EE ++ F+ +K P + TF ++L C++L L LGRQ H Q +
Sbjct: 353 WNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQIL 412
Query: 363 K------IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
K V N++I MY +CG ++ L F + D++SWN++I G A +GY
Sbjct: 413 KHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGY 472
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
ALE+F +M ++ KPD +T +GVLSACS+AGLV++GR YF M+ + L P H+T
Sbjct: 473 GTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFT 532
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
C+VDLLGR G +DEA +L+ + ++ VWG+LL AC++H NI++G+ E++ME+
Sbjct: 533 CMVDLLGRAGCLDEANDLIQTM---PMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEI 589
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSS 596
+P NSG Y++L+ MY GR +D R+ QM++ GV K+PGCSWI+I HVF+ D
Sbjct: 590 DPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKR 649
Query: 597 HPKFHRLRYLLNLLHTEIE 615
HP + +L L +++
Sbjct: 650 HPLKKDIHLVLKFLTEQMK 668
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 210/499 (42%), Gaps = 78/499 (15%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVI 59
++ EA N+F MP+ D +WN M+ G+ ++ + A+ F M D +++ + +
Sbjct: 99 GKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSAL 158
Query: 60 ---AGLM--------------------------------QSDNVQGAKEVFDGMEVRDVV 84
AGL + V A+ FDGM VR++V
Sbjct: 159 SACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIV 218
Query: 85 TWNSMISGYVCNGLIDEALRVFHGM----------PLKDVV----SWNLVIGALVNCQRM 130
+WNS+I+ Y NG +AL VF M L VV SW+ + L R+
Sbjct: 219 SWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARV 278
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
+ Y D+ +V+ + R+ EAR +FD+MP ++V + M+ GY
Sbjct: 279 VKRDKY-----RNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAA 333
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV--- 247
V A +F M ++++ SW LI G + + A+ F + E W + +
Sbjct: 334 SVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKR--ESIWPTHYTFGNL 391
Query: 248 ------LIRNGLVKEAHSYLEKYPY-------SNIASWTNVIVGYFEMGEVGSAIKVFEL 294
L L ++AH+ + K+ + S+I ++I Y + G V VFE
Sbjct: 392 LNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFER 451
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
M RDV WN MI G +N G L+ F +M SG PD+ T VL+ CS ++ G
Sbjct: 452 MVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEG 511
Query: 355 RQ-IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLA 412
R+ H+ ++ M+ + R G + A ++P+ D + W S++
Sbjct: 512 RRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACK 571
Query: 413 YHGYAEKALELFERMRLTD 431
HG E + E++ D
Sbjct: 572 VHGNIELGKYVAEKLMEID 590
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 111/263 (42%), Gaps = 61/263 (23%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCL------------------ 43
R A ++ A+ +F M +++ V+WN +I GY +NG + A+ L
Sbjct: 331 RAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGN 390
Query: 44 ---------------------------FNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFD 76
F E D+F N++I M+ V+ VF+
Sbjct: 391 LLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFE 450
Query: 77 GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDL 132
M RDVV+WN+MI GY NG AL +F M + D V+ +IG L C L
Sbjct: 451 RMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVT---MIGVLSACSHAGL 507
Query: 133 AES---YFK----EMGARDVAS-WTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMI 183
E YF E+G + +T MV+ L R G + EA L MP + D W ++
Sbjct: 508 VEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLL 567
Query: 184 AGYLDNGCVGVAEDLFQKMHDRD 206
A +G + + + + +K+ + D
Sbjct: 568 AACKVHGNIELGKYVAEKLMEID 590
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 140/325 (43%), Gaps = 31/325 (9%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
R+ EA+ +FD+MP R+ V+ M+ GY + + A +F+ M E+++ ++N +IAG Q
Sbjct: 303 RVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQ 362
Query: 65 SDNVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEAL-RVFHGMPLK------- 112
+ + A +F ++ + T+ ++++ C L D L R H LK
Sbjct: 363 NGENEEAVRLFLLLKRESIWPTHYTFGNLLNA--CANLADLKLGRQAHTQILKHGFWFQS 420
Query: 113 ----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
D+ N +I + C ++ F+ M RDV SW M+ G + G A ++F
Sbjct: 421 GEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIF 480
Query: 169 DKMPAKDVQAWNLMIAGYLD----NGCVGVAEDLFQKMH-DRDLTSWKQ----LINGLVN 219
KM + ++ + G L G V F M + L K +++ L
Sbjct: 481 RKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGR 540
Query: 220 SRRIDAAISYFKQMPETCEK-TWNSIISVLIRNGLVKEAHSYLEKY-PYSNIASWTNVIV 277
+ +D A + MP + W S+++ +G ++ EK + S V++
Sbjct: 541 AGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLL 600
Query: 278 G--YFEMGEVGSAIKVFELMTTRDV 300
Y E+G ++V + M R V
Sbjct: 601 SNMYAELGRWKDVVRVRKQMRQRGV 625
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 112/305 (36%), Gaps = 63/305 (20%)
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC---------- 383
D++ F +L C + R+IHA+ IK + + N ++ Y +C
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 384 ---------------------GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
G + A F S+P D SWN+++ G A H E+AL
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 423 LFERMRLTDFKPDDITFVGVLSACS----------YAGLVDQGRYYFDCMKNKYFLQPRS 472
F M DF ++ +F LSAC+ L+ + RY D + S
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYS 197
Query: 473 --------------------AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+ ++ + G +A+ + + +G+E +
Sbjct: 198 KCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLAS 257
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQMKEN 570
++ AC + I+ G RV++ + + + L L +MY C R +A+ +F +M
Sbjct: 258 VVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317
Query: 571 GVKKE 575
V E
Sbjct: 318 NVVSE 322
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 215/691 (31%), Positives = 346/691 (50%), Gaps = 83/691 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N I A+ LFD MP RD +WN M+ GY + + +A LF QMP+R++ T+ +I+
Sbjct: 137 VQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMIS 196
Query: 61 GLMQSDNVQGAKEVFDGM----------------------------EV-----------R 81
G ++ + ++F M EV
Sbjct: 197 GYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFES 256
Query: 82 DVVTWNSMISGYVCNG-LIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
DVV S+++ Y + +D A++ F GM ++ +W+ +I AL + R+D A + +
Sbjct: 257 DVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRD 316
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
+ + S T ++ GL R GRI EAR LF+++P V +WN MI GY+ NG V A++LF
Sbjct: 317 PVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFD 376
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP------------------------ET 236
+M R+ SW +I G + R + A+ + + ET
Sbjct: 377 RMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALET 436
Query: 237 CEKTW---------------NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFE 281
+ N++IS+ + ++ + + SW + I +
Sbjct: 437 GRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQ 496
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
+ A +F+ M +RDV W +I + + G+E ++FF M P++ T +
Sbjct: 497 NNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTIL 556
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L++C L + LG+QIH AIK + V+NA+++MY +CG S + F S+ DI
Sbjct: 557 LSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCADSHKV-FDSMEERDI 615
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
+WN+ I G A HG +A++++E M P+++TFVG+L+ACS+AGLVD+G +F
Sbjct: 616 FTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKS 675
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
M Y L P HY C+VDLLGR G + A + ++ IE +W ALLGAC+IH
Sbjct: 676 MSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDM---PIEPDTVIWSALLGACKIHK 732
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
N ++G A E++ EP+N+G Y++L+ +Y S G + + MK+ GV KEPGCSW+
Sbjct: 733 NAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWM 792
Query: 582 QINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
QI + H F++GD H K + Y L L+T
Sbjct: 793 QIRNKVHSFVTGDKQHEKIEEIDYTLQDLYT 823
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 152/525 (28%), Positives = 253/525 (48%), Gaps = 45/525 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R++EA+ +FD MP RD + WN MI Y +G L++A LF+ + ++ T +++G
Sbjct: 45 RLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSG 104
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ V A+ VFDGM R+ V WN+M+S YV NG I A R+F MP +DV SWN ++
Sbjct: 105 YARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMV 164
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
+ ++M A + FK+M R++ +WT+M++G VR + + +F M +
Sbjct: 165 TGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQS 224
Query: 182 MIAGYL----------------------------------------DNGCVGVAEDLFQK 201
A L D + +A F
Sbjct: 225 NFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDG 284
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M +R+ +W +I L + RIDAAI+ + + P + ++++ L R G + EA
Sbjct: 285 MVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILF 344
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
E+ P + SW +I GY + G V A ++F+ M R+ W MI G +N EE L
Sbjct: 345 EQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALD 404
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
+ +G P ++ TS CS + L+ GRQ+H+ A+K + V NA+I+MY
Sbjct: 405 LLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYG 464
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+C N++ F+ + + D +SWNS I L + E A +F+ M D +++
Sbjct: 465 KCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNM----LSRDVVSWTT 520
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
++SA + A D+ +F M +++ +P S T ++ + G G
Sbjct: 521 IISAYAQAERGDEAVEFFKTMLHEH-EKPNSPILTILLSVCGGLG 564
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 212/464 (45%), Gaps = 50/464 (10%)
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
A D ++ + + L R GR+ EAR++FD MP +D+ AWN MI+ Y ++G + A LF
Sbjct: 30 ALDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDA 89
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
+ ++ + L++G R+ A F MPE WN+++S ++NG + A
Sbjct: 90 ISGGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLF 149
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
+ P ++ SW +++ GY ++ A +F+ M R++ W VMI G + +G
Sbjct: 150 DAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWD 209
Query: 322 FFVQMKESGPSPDNATFTSVLTICS---DLPTLDLGRQI--------------------- 357
F M G SPD + F SVL+ + DL L++ R +
Sbjct: 210 IFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYT 269
Query: 358 -HAQAIKIA---------RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
A A+ IA RN++T + MI + G I +A+ + P+ I S ++
Sbjct: 270 RDASALDIAIKFFDGMVERNEYTW--STMIAALSHGGRIDAAIAVYGRDPVKSIPSQTAL 327
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDI--TFVGVLSACSYAGLVDQGRYYFDCMKNK 465
+ GLA G +A LFE++ PD I ++ +++ G+VD+ + FD M +
Sbjct: 328 LTGLARCGRITEARILFEQI------PDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFR 381
Query: 466 YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKV 525
+ + ++ + G +EA++LL + +G+ S + + AC ++
Sbjct: 382 -----NTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALET 436
Query: 526 G-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
G ++ V NS V L MY C E +++F +M+
Sbjct: 437 GRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMR 480
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 209/625 (33%), Positives = 329/625 (52%), Gaps = 31/625 (4%)
Query: 18 QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGLMQSDNVQGAKE 73
+ + V W I GY KNGF + A+ L+ QM D + +VI ++Q ++
Sbjct: 82 RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141
Query: 74 VFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQR 129
V + + R DV+ ++ S Y G ++ A +VF MP +DVVSWN +I +
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ 201
Query: 130 MDLAESYFKEM---GARDVASWTIMVNGL------VREGRIVEARKLFDKMPAKDVQAWN 180
A + F EM G + +S + V + + +G+ + + + + DV N
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIES-DVLVVN 260
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
++ Y G V A LF++M RD+ SW +I G + + A+++F +M K
Sbjct: 261 GLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKP 320
Query: 241 WNSIISVLIRNGLV--------KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKV 291
NSI V + ++ H Y + + + N +V Y + G V SA K+
Sbjct: 321 -NSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKL 379
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
FE M ++V WN +I G ++ E L F++M+ G PD+ SVL C+ L
Sbjct: 380 FERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLAL 439
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
+ G+QIH I+ V ++ +YA+CGN+ +A F +P D++SW ++I
Sbjct: 440 EQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAY 499
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
HG+ E AL LF +M+ T K D I F +L+ACS+AGLVDQG YF CMK+ Y L P+
Sbjct: 500 GIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPK 559
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
HY C+VDLLGR G +DEA ++ + +E VWGALLGACRIH NI++GE A +
Sbjct: 560 LEHYACLVDLLGRAGHLDEANGIIKNM---SLEPDANVWGALLGACRIHCNIELGEQAAK 616
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
+ EL+P+N+G Y++L+ +Y R ED ++ MKE GVKK+PGCS + ++ FL
Sbjct: 617 HLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFL 676
Query: 592 SGDSSHPKFHRLRYLLNLLHTEIER 616
GD +HP+ ++ +L +L+ ++ +
Sbjct: 677 VGDRTHPQSEQIYAMLEILYEQMRK 701
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 180/400 (45%), Gaps = 74/400 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----------------- 48
++ A+ +FD+MP+RD V+WN +I GY +NG A+ LF++M
Sbjct: 171 LENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPV 230
Query: 49 ----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
E D+ N ++ + NV A ++F+ M +RDV +W
Sbjct: 231 CAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASW 290
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQRMDLAESYFKEMG---- 141
N++I GY N EAL F+ M ++ + ++ ++ L C + E + G
Sbjct: 291 NAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIR 350
Query: 142 ----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+ DV +VN + G + A KLF++MP K+V AWN +I+GY +G A
Sbjct: 351 SGFESNDVVG-NALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALA 409
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
LF +M + + I ++ A ++F + + K+
Sbjct: 410 LFIEMQAQGIKPDSFAIVSVL------PACAHFLALEQG------------------KQI 445
Query: 258 HSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
H Y + + SN+ T ++ Y + G V +A K+FE M +DV W MI G + G
Sbjct: 446 HGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHG 505
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
E+ L F +M+E+G D+ FT++LT CS +D G Q
Sbjct: 506 EDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ 545
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 207/601 (34%), Positives = 341/601 (56%), Gaps = 30/601 (4%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
+T +N +I Y K G L NA +F+ +P+ ++F++NT+++ + +Q + VFD M
Sbjct: 39 ETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMP 98
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD------VVSWNLVIGALVNCQRMDLA 133
DVV+WNS++SGY NGLI E++RV++ M LKD ++++ ++ N +DL
Sbjct: 99 NHDVVSWNSLLSGYAGNGLISESVRVYN-MMLKDGSVNLNRITFSTMLILSSNRGFVDLG 157
Query: 134 ESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
++ S+ + + LV + G I +A ++F+++P K++ +N MI G L
Sbjct: 158 RQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRC 217
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM--PETC--EKTWNSII 245
+ AE LF M ++D SW +I GL + A+ FK+M C + T+ S++
Sbjct: 218 RFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVL 277
Query: 246 SVLIRNGLV-----KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+ G + K+ H+Y+ + Y NI + ++ Y + V A VF M ++
Sbjct: 278 TAC--GGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKN 335
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
V W M+ G G+N EE ++ F M+ + PD+ T SV++ C++L +L+ G Q H
Sbjct: 336 VISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHG 395
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
QA+ F TVSNA+IT+Y +CG+++ A F + I D +SW +++ G A G A +
Sbjct: 396 QALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANE 455
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
+ LFE M PD +TFVGVLSACS AGLV++G +YF+CM ++ + P HYTC++
Sbjct: 456 TISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMI 515
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTV--WGALLGACRIHNNIKVGEIAGERVMELE 537
DLL R G ++EA N +N+ + SP W LL +CR++ N+++G+ A E + +LE
Sbjct: 516 DLLSRAGRLEEAKNFINQ-----MPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLE 570
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
P N Y++L+ +Y + G+ +D ++ M+E GVKKEPG SWI+ + H+F + D S
Sbjct: 571 PQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSS 630
Query: 598 P 598
P
Sbjct: 631 P 631
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/515 (21%), Positives = 212/515 (41%), Gaps = 107/515 (20%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I +A +F+++P+++ V +N MI G + F+ A LF+ MPE+D ++ T+I GL Q+
Sbjct: 189 INDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQN 248
Query: 66 DNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGL--IDEALRVFHGMPLKDVVSWNL 119
+ A + F M + D T+ S+++ C G +DE ++ H ++ N+
Sbjct: 249 GLFKEAVDKFKEMGIEGFCMDQFTFGSVLTA--CGGFLALDEGKQI-HAYIIRTDYQDNI 305
Query: 120 VIGALV-----NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
+G+ + C+ + AE+ F++M ++V SWT M+ G + G EA ++F M
Sbjct: 306 FVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRN 365
Query: 175 DVQAWNLMIAGYLDNGCVGVAE-DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
++ + + G + + C +A + + H + L S GL+ +
Sbjct: 366 EIHPDDFTL-GSVISSCANLASLEEGAQFHGQALAS------GLICFVTVS--------- 409
Query: 234 PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE 293
N++I++ + G ++ AH + + SWT ++ GY + G+ I +FE
Sbjct: 410 --------NALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFE 461
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
M G PD TF VL+ CS ++
Sbjct: 462 TMLAH-------------------------------GIVPDGVTFVGVLSACSRAGLVEK 490
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
G +K R + +P H + +I L+
Sbjct: 491 GYHYFECMVKEHR--------------------------ITPIPDH----YTCMIDLLSR 520
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS- 472
G E+A +M F PD I + +LS+C G ++ G++ + + L+P++
Sbjct: 521 AGRLEEAKNFINQM---PFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHK---LEPQNP 574
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
A Y + + G D+ L +R G++ P
Sbjct: 575 ASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEP 609
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 107/257 (41%), Gaps = 16/257 (6%)
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
S + +T+ L C + +++H + I+ N T + N +I Y + G++++A
Sbjct: 2 SSSSNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARN 61
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F +P ++ SWN+++ + GY + +F+ M D +++ +LS + GL
Sbjct: 62 VFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMP----NHDVVSWNSLLSGYAGNGL 117
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
+ + ++ M + ++ ++ L G +D + +I G +
Sbjct: 118 ISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSY----- 172
Query: 512 ALLGACRIHNNIKVGEIA-GERVMELEP-NNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
+G+ + K G I R+ E P N VY + L C +A+++F M E
Sbjct: 173 LFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPE 232
Query: 570 NGVKKEPGCSWIQINDG 586
+ SW I G
Sbjct: 233 -----KDSISWTTIITG 244
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 215/640 (33%), Positives = 326/640 (50%), Gaps = 35/640 (5%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDMFTYNTVIAGLMQSD 66
A+ LFD++PQ D + +I Y G L A +FN+ P RD YN +I G +
Sbjct: 67 ARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMN 126
Query: 67 NVQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS-----W 117
+ A E+F M D T+ S++S + HG +K +
Sbjct: 127 DGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVL 186
Query: 118 NLVIGALVNCQR---------MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
N ++ V C M A F EM R+ WT ++ G VR G + AR++
Sbjct: 187 NALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREIL 246
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNS---- 220
D M + AWN MI+GYL +G A LF+KM D +++ +I+ +
Sbjct: 247 DTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFL 306
Query: 221 --RRIDAAISYFKQMPET--CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVI 276
+++ A I + P+ N++I++ + G V A + P +I +W ++
Sbjct: 307 LGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLL 366
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
GY G + A F M +++ W VMI GL +N GE+ LK F QMK G P++
Sbjct: 367 SGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDY 426
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
F +T CS L L+ GRQ+HAQ + + + +V NAMITMYARCG +++A F ++
Sbjct: 427 AFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTM 486
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
P D +SWNS+I L HG+ KA+EL+E+M PD TF+ VLSACS+AGLV++G
Sbjct: 487 PFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGN 546
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
YF+ M Y + P HY ++DL R G +A N+++ + E +W ALL
Sbjct: 547 RYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSM---PFEARAPIWEALLAG 603
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
CR H N+ +G A E++ +L P + G Y++L+ MY S GR D R M++ GVKKEP
Sbjct: 604 CRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEP 663
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
CSW ++ + HVFL D+ HP+ + L L+ E+++
Sbjct: 664 ACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKK 703
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/511 (24%), Positives = 215/511 (42%), Gaps = 96/511 (18%)
Query: 151 MVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK--MHD 204
+VN L+ + V ARKLFD++P DV A +I Y G + +A ++F + +
Sbjct: 50 IVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDM 109
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMP------------------------------ 234
RD + +I G + +AI F+ M
Sbjct: 110 RDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQ 169
Query: 235 ----------ETCEKTWNSIISVLIRNG---------LVKEAHSYLEKYPYSNIASWTNV 275
E N+++SV ++ L+ A ++ P N WT +
Sbjct: 170 MHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTL 229
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
I GY G++ A ++ + MT + WN MI G + L E+ L F +M+ G D
Sbjct: 230 ITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDE 289
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIK----IARNQFTTVSNAMITMYARCGNIQSALL 391
+T+TSV++ C+D LG+Q+HA +K R+ +V N +IT+Y + G + A
Sbjct: 290 STYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARK 349
Query: 392 EFSSVPIHDIISWNSI-------------------------------ICGLAYHGYAEKA 420
F +P+ DII+WN++ I GLA +G+ E+A
Sbjct: 350 IFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQA 409
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L+LF +M+L ++P+D F G ++ACS G ++ GR + + S ++
Sbjct: 410 LKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVG-NAMIT 468
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH-NNIKVGEIAGERVMELEPN 539
+ R G+++ A + + V P W +++ A H + +K E+ + + E
Sbjct: 469 MYARCGIVEAARTMFLTMPF----VDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILP 524
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
+ +L + G E+ R F M EN
Sbjct: 525 DRRTFLTVLSACSHAGLVEEGNRYFNSMLEN 555
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 184/476 (38%), Gaps = 138/476 (28%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------------- 47
+RN + A+ + D M ++ + WN MI GY +G ++A+ LF +M
Sbjct: 234 VRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYT 293
Query: 48 ----------------------------PERDMFTY--NTVIAGLMQSDNVQGAKEVFDG 77
P+RD NT+I + V GA+++F
Sbjct: 294 SVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYE 353
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF 137
M V+D++TWN+++SGYV G ++EA F MP K++++
Sbjct: 354 MPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLT--------------------- 392
Query: 138 KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
WT+M++GL + G +A KLF++M + + AG + C
Sbjct: 393 ----------WTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAI-TAC------ 435
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
++ L N R++ A I + ++ N++I++ R G+V+ A
Sbjct: 436 --------------SVLGALENGRQLHAQIVHLGH--DSTLSVGNAMITMYARCGIVEAA 479
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ P+ + SW N MI LG++ G
Sbjct: 480 RTMFLTMPFVDPVSW-------------------------------NSMIAALGQHGHGV 508
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ-----IHAQAIKIARNQFTTV 372
+ ++ + QM + G PD TF +VL+ CS ++ G + + I + +
Sbjct: 509 KAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYAR- 567
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELFERM 427
MI ++ R G A S+P W +++ G HG + +E E++
Sbjct: 568 ---MIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKL 620
>gi|18398422|ref|NP_564401.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806407|sp|P0C7R0.1|PPR69_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g32415, mitochondrial; Flags: Precursor
gi|332193363|gb|AEE31484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 216/650 (33%), Positives = 348/650 (53%), Gaps = 63/650 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ + EA+ LF+ MP+R+ VT N M+ GY K ++ A LF +MP +++ ++ ++
Sbjct: 89 KTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTA 147
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
L + A E+FD M R+VV+WN++++G + NG +++A +VF MP +DVVSWN +I
Sbjct: 148 LCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMI 207
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
+ M+ A+ F +M ++V +WT MV G R G + EA +LF +MP +++ +W
Sbjct: 208 KGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTA 267
Query: 182 MIAGY--------------------------------LDNGCVGVAED---LFQKMH--- 203
MI+G+ L C G+ + L +++H
Sbjct: 268 MISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQV 327
Query: 204 --------DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
D D K L++ +S I +A S + + ++ N II+ ++NG ++
Sbjct: 328 ISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDL--QSCNIIINRYLKNGDLE 385
Query: 256 EAHSYLEKY-PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
A + E+ + SWT++I GY E G+V A +F+ + +D W VMI GL +N+
Sbjct: 386 RAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNE 445
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR--NQFTTV 372
L E M G P N+T++ +L+ LD G+ IH K + +
Sbjct: 446 LFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLIL 505
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
N++++MYA+CG I+ A F+ + D +SWNS+I GL++HG A+KAL LF+ M +
Sbjct: 506 QNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGK 565
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
KP+ +TF+GVLSACS++GL+ +G F MK Y +QP HY ++DLLGR G + EA
Sbjct: 566 KPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAE 625
Query: 493 NLLNEIRADGIEVSP--TVWGALLGAC----RIHNNIKVGEIAGERVMELEPNNSGVYLI 546
++ + +P TV+GALLG C R + + E A R++EL+P N+ ++
Sbjct: 626 EFIS-----ALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVA 680
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSS 596
L +Y GR + K + +M GVKK PGCSW+ +N +VFLSGD S
Sbjct: 681 LCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKS 730
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 244/516 (47%), Gaps = 72/516 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+RN +++A+ +FD MP RD V+WN MI+GY +N ++ A LF M E+++ T+ +++
Sbjct: 180 IRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVY 239
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV------ 114
G + +V+ A +F M R++V+W +MISG+ N L EAL +F M KDV
Sbjct: 240 GYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMK-KDVDAVSPN 298
Query: 115 ----VSWNLVIGAL-VNCQRMD--------------------LAESYFKEMGAR------ 143
+S G L V +R+ LA+S +
Sbjct: 299 GETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASA 358
Query: 144 --------DVASWTIMVNGLVREGRIVEARKLFDKMPA-KDVQAWNLMIAGYLDNGCVGV 194
D+ S I++N ++ G + A LF+++ + D +W MI GYL+ G V
Sbjct: 359 QSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSR 418
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A LFQK+HD+D +W +I+GLV + A S M K NS SVL+ +
Sbjct: 419 AFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSA-- 476
Query: 255 KEAHSYLE--KYPYSNIASWT-----------NVIVGYFEMGEVGSAIKVFELMTTRDVT 301
A S L+ K+ + IA T +++ Y + G + A ++F M +D
Sbjct: 477 -GATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTV 535
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN MI GL + L ++ L F +M +SG P++ TF VL+ CS + G ++ +A
Sbjct: 536 SWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELF-KA 594
Query: 362 IKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPI---HDIISWNSIICGLAYHGY 416
+K + + + +MI + R G ++ A S++P H + +CGL +
Sbjct: 595 MKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDK 654
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACS-YAGL 451
+ + MRL + P + G ++ C+ YAGL
Sbjct: 655 DAEGIAERAAMRLLELDP--VNAPGHVALCNVYAGL 688
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 156/558 (27%), Positives = 258/558 (46%), Gaps = 84/558 (15%)
Query: 30 GYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
G ++ GF + + ++ E + ++ + Q ++ VV W S+
Sbjct: 36 GSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSIN------------RVVYWTSL 83
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
+S Y G +DEA +F MP +++V+ N ++ V C+RM+ A + F+EM ++V SWT
Sbjct: 84 LSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM-PKNVVSWT 142
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+M+ L +GR +A +LFD+MP ++V +WN ++ G + NG + A+ +F M RD+ S
Sbjct: 143 VMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVS 202
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
W +I G + + ++ A F M E TW S++ R G V+EA+ + P NI
Sbjct: 203 WNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI 262
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE- 328
SWT +I G+ W N+L E L F++MK+
Sbjct: 263 VSWTAMISGF----------------------AW---------NELYREALMLFLEMKKD 291
Query: 329 -SGPSPDNATFTSVLTICSDLPT--LDLGRQIHAQAIKIARNQFTTV------SNAMITM 379
SP+ T S+ C L LG Q+HAQ I N + TV + +++ M
Sbjct: 292 VDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVIS---NGWETVDHDGRLAKSLVHM 348
Query: 380 YARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
YA G I SA LL S D+ S N II +G E+A LFER++ D +
Sbjct: 349 YASSGLIASAQSLLNES----FDLQSCNIIINRYLKNGDLERAETLFERVKSLH---DKV 401
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
++ ++ AG V + F + +K +T ++ L + L EA +LL++
Sbjct: 402 SWTSMIDGYLEAGDVSRAFGLFQKLHDK-----DGVTWTVMISGLVQNELFAEAASLLSD 456
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGE----IAGERVMELEPN----NSGVYLILTE 549
+ G++ + + LL + +N+ G+ + + +P+ NS L
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNS-----LVS 511
Query: 550 MYLSCGRREDAKRIFAQM 567
MY CG EDA IFA+M
Sbjct: 512 MYAKCGAIEDAYEIFAKM 529
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 188/465 (40%), Positives = 272/465 (58%), Gaps = 27/465 (5%)
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL 213
G + R EARKLFDKMP + +WN +++GY+ NG + A +F KM +R++ SW +
Sbjct: 3 GYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAM 62
Query: 214 INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWT 273
I G V I+ A F +MPE +W ++ LI +G V EA + P ++ + T
Sbjct: 63 IRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVAST 122
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE---------------E 318
N+I G G + A ++F+ M R+V W MI G E D G E
Sbjct: 123 NMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISG--EKDDGTWSTMIKIYERKGFELE 180
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNA 375
L F M+ G P + SVL++C L +LD GRQ+H+Q + R+QF VS+
Sbjct: 181 ALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQ---LVRSQFDIDIYVSSV 237
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
+ITMY +CG++ +A F DI+ WNSII G A HG+ EKALE+F M + PD
Sbjct: 238 LITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPD 297
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
+ITF+GVLSACSY G V +G F+ MK+KY + P++ HY C+VDLLGR G ++EAMNL+
Sbjct: 298 EITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLI 357
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
+ +E VWGALLGACR H N+ + EIA +++++LEPNN+G Y++L+ +Y S
Sbjct: 358 ENM---PVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQS 414
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS-SHPK 599
R +D + M+ ++K PGCSWI+++ H+F G S SHP+
Sbjct: 415 RWKDVVELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPE 459
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 221/419 (52%), Gaps = 34/419 (8%)
Query: 30 GYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
GYF+N A LF++MPE + ++N +++G +Q+ + A++VFD M R+VV+W +M
Sbjct: 3 GYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAM 62
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
I GYV GLI+EA +F MP ++VVSW +++G L+ R+D A F M +DV + T
Sbjct: 63 IRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVAST 122
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
M++GL EGR++EAR++FD+MP ++V AW MI+G D+G +
Sbjct: 123 NMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDG------------------T 164
Query: 210 WKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWNSIISVLIRNGLV------KEAHSYLE 262
W +I A++ F M E ++ S+ISVL G + ++ HS L
Sbjct: 165 WSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLV 224
Query: 263 KYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
+ + +I + +I Y + G++ +A +VF+ +++D+ +WN +I G ++ GE+ L+
Sbjct: 225 RSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALE 284
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI-HAQAIKIARNQFTTVSNAMITMY 380
F M S +PD TF VL+ CS + G +I + K + T M+ +
Sbjct: 285 VFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLL 344
Query: 381 ARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFE--RMRLTDFKPDD 436
R G + A+ ++P+ D I W +++ H K L+L E +L +P++
Sbjct: 345 GRAGKLNEAMNLIENMPVEADAIVWGALLGACRTH----KNLDLAEIAAKKLLQLEPNN 399
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 89/184 (48%), Gaps = 17/184 (9%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGLMQ 64
A+ +FD+ +D V WN +I GY ++GF + A+ +F+ M D T+ V++
Sbjct: 251 AKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSY 310
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLK-DVVS 116
+ V+ E+F+ M+ + V + Y C G ++EA+ + MP++ D +
Sbjct: 311 TGKVKEGLEIFESMKSKYQV--DPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIV 368
Query: 117 WNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
W ++GA + +DLAE K ++ + + ++ N + R + +L M A
Sbjct: 369 WGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRA 428
Query: 174 KDVQ 177
K+++
Sbjct: 429 KNLR 432
>gi|8920616|gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical protein F19I3.26 gi|7485810
from Arabidopsis thaliana BAC F19I3 gb|AC004238. It
contains a PPR repeat domain PF|01535. ESTs gb|AV539170,
gb|AV551571, gb|AA597781, gb|AV544524, gb|AV531577 and
gb|AV533492 come from this gene [Arabidopsis thaliana]
Length = 864
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 216/650 (33%), Positives = 349/650 (53%), Gaps = 63/650 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ + EA+ LF+ MP+R+ VT N M+ GY K ++ A LF +MP +++ ++ ++
Sbjct: 192 KTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTA 250
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
L + A E+FD M R+VV+WN++++G + NG +++A +VF MP +DVVSWN +I
Sbjct: 251 LCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMI 310
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
+ M+ A+ F +M ++V +WT MV G R G + EA +LF +MP +++ +W
Sbjct: 311 KGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTA 370
Query: 182 MIAGY--------------------------------LDNGCVGVAED---LFQKMH--- 203
MI+G+ L C G+ + L +++H
Sbjct: 371 MISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQV 430
Query: 204 --------DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
D D K L++ +S I +A S + + ++ N II+ ++NG ++
Sbjct: 431 ISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDL--QSCNIIINRYLKNGDLE 488
Query: 256 EAHSYLEKY-PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
A + E+ + SWT++I GY E G+V A +F+ + +D W VMI GL +N+
Sbjct: 489 RAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNE 548
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR--NQFTTV 372
L E M G P N+T++ +L+ LD G+ IH K + +
Sbjct: 549 LFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLIL 608
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
N++++MYA+CG I+ A F+ + D +SWNS+I GL++HG A+KAL LF+ M +
Sbjct: 609 QNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGK 668
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
KP+ +TF+GVLSACS++GL+ +G F MK Y +QP HY ++DLLGR G + EA
Sbjct: 669 KPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAE 728
Query: 493 NLLNEIRADGIEVSP--TVWGALLGACRIHNNIK----VGEIAGERVMELEPNNSGVYLI 546
++ + +P TV+GALLG C ++ K + E A R++EL+P N+ ++
Sbjct: 729 EFIS-----ALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVA 783
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSS 596
L +Y GR + K + +M GVKK PGCSW+ +N +VFLSGD S
Sbjct: 784 LCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKS 833
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 151/508 (29%), Positives = 240/508 (47%), Gaps = 72/508 (14%)
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKE 139
+ VV W S++S Y G +DEA +F MP +++V+ N ++ V C+RM+ A + F+E
Sbjct: 177 INRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFRE 236
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
M ++V SWT+M+ L +GR +A +LFD+MP ++V +WN ++ G + NG + A+ +F
Sbjct: 237 M-PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVF 295
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
M RD+ SW +I G + + ++ A F M E TW S++ R G V+EA+
Sbjct: 296 DAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYR 355
Query: 260 YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+ P NI SWT MI G N+L E
Sbjct: 356 LFCEMPERNIVSWT-------------------------------AMISGFAWNELYREA 384
Query: 320 LKFFVQMKE--SGPSPDNATFTSVLTICSDLPT--LDLGRQIHAQAIKIARNQFTTV--- 372
L F++MK+ SP+ T S+ C L LG Q+HAQ I N + TV
Sbjct: 385 LMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVIS---NGWETVDHD 441
Query: 373 ---SNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
+ +++ MYA G I SA LL S D+ S N II +G E+A LFER+
Sbjct: 442 GRLAKSLVHMYASSGLIASAQSLLNES----FDLQSCNIIINRYLKNGDLERAETLFERV 497
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
+ D +++ ++ AG V + F + +K +T ++ L + L
Sbjct: 498 KSLH---DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK-----DGVTWTVMISGLVQNEL 549
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE----IAGERVMELEPN---- 539
EA +LL+++ G++ + + LL + +N+ G+ + + +P+
Sbjct: 550 FAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQ 609
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQM 567
NS L MY CG EDA IFA+M
Sbjct: 610 NS-----LVSMYAKCGAIEDAYEIFAKM 632
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 244/516 (47%), Gaps = 72/516 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+RN +++A+ +FD MP RD V+WN MI+GY +N ++ A LF M E+++ T+ +++
Sbjct: 283 IRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVY 342
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV------ 114
G + +V+ A +F M R++V+W +MISG+ N L EAL +F M KDV
Sbjct: 343 GYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMK-KDVDAVSPN 401
Query: 115 ----VSWNLVIGAL-VNCQRMD--------------------LAESYFKEMGAR------ 143
+S G L V +R+ LA+S +
Sbjct: 402 GETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASA 461
Query: 144 --------DVASWTIMVNGLVREGRIVEARKLFDKMPA-KDVQAWNLMIAGYLDNGCVGV 194
D+ S I++N ++ G + A LF+++ + D +W MI GYL+ G V
Sbjct: 462 QSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSR 521
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A LFQK+HD+D +W +I+GLV + A S M K NS SVL+ +
Sbjct: 522 AFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSA-- 579
Query: 255 KEAHSYLE--KYPYSNIASWT-----------NVIVGYFEMGEVGSAIKVFELMTTRDVT 301
A S L+ K+ + IA T +++ Y + G + A ++F M +D
Sbjct: 580 -GATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTV 638
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN MI GL + L ++ L F +M +SG P++ TF VL+ CS + G ++ +A
Sbjct: 639 SWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELF-KA 697
Query: 362 IKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPI---HDIISWNSIICGLAYHGY 416
+K + + + +MI + R G ++ A S++P H + +CGL +
Sbjct: 698 MKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDK 757
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACS-YAGL 451
+ + MRL + P + G ++ C+ YAGL
Sbjct: 758 DAEGIAERAAMRLLELDP--VNAPGHVALCNVYAGL 791
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 216/644 (33%), Positives = 342/644 (53%), Gaps = 56/644 (8%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ Y K G L A +F++MP + F++NT+I+G + N + ++ + M D V
Sbjct: 49 NNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPV 108
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG-ALVNC---QRMDLA---ESYF 137
+W ++I GY GL D A+ +F M + V + L +C Q +D+ S+
Sbjct: 109 SWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFV 168
Query: 138 KEMGARD-VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
++G V T ++N + G V A+ +FD+M K++ WN +I+ Y+ +G +A
Sbjct: 169 VKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAA 228
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM----------------------- 233
F+KM DRD+ SW +I+G A++ F +M
Sbjct: 229 SQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANL 288
Query: 234 -----------------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN--IASWTN 274
ET N++IS+ ++G V+ A +E SN I ++T+
Sbjct: 289 EKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTS 348
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ GY ++G V A ++F + RDV W MI G +N L + L+ F M GP P+
Sbjct: 349 LLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPN 408
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ T ++L++ S L L+ G+QIHA AIK + +V+NA+I MYA+ GNI A F
Sbjct: 409 SYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD 468
Query: 395 SVP--IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
+P +I+SW S+I LA HG ++A+ LFERM KPD IT+VGVLSAC++ GLV
Sbjct: 469 -LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLV 527
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+QGR Y++ M + ++P +HY C++DL GR GL+ EA I + IE WG+
Sbjct: 528 EQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLF---IESMPIEPDNIAWGS 584
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LL +C+IH N + ++A ER++ ++P NSG YL L +Y +CG+ E+A + MK+ GV
Sbjct: 585 LLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGV 644
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+KE G SWI I + H F D HP+ + L+ + EI++
Sbjct: 645 RKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKK 688
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 228/507 (44%), Gaps = 77/507 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM---P--ERDMFTY 55
M++ + + A + F+KMP RD V+WN MI GY + G+ A+ +F++M P + D FT
Sbjct: 219 MQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTL 278
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
++++ + + K++ + + T SG V N LI +
Sbjct: 279 ASILSACANLEKLNIGKQIHAYILRAETET-----SGAVGNALISMYAK----------- 322
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
V R+ + + + ++ ++T +++G + G + AR++F+K+ +D
Sbjct: 323 ------SGGVEIARLIVEHNRTSNL---NIIAFTSLLDGYTKLGNVKPAREIFNKLRDRD 373
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
V AW MI GY+ NG A +LF+ M + PE
Sbjct: 374 VVAWTAMIVGYVQNGLWNDALELFRLM---------------------------VNEGPE 406
Query: 236 TCEKTWNSIISV-----LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAI 289
T +++SV ++ +G K+ H+ K S+ S TN ++ Y + G + A
Sbjct: 407 PNSYTLAAMLSVSSSLTILEHG--KQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAK 464
Query: 290 KVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+VF+L +++ W MI L ++ LG+E + F +M G PD+ T+ VL+ C+ +
Sbjct: 465 RVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHV 524
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNA-MITMYARCGNIQSALLEFSSVPIH-DIISWNS 406
++ GR+ + ++ + T A MI +Y R G +Q A L S+PI D I+W S
Sbjct: 525 GLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGS 584
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDD----ITFVGVLSACSYAGLVDQGRYYFDCM 462
++ H A+ A ER+ L D P + + V SAC Q R M
Sbjct: 585 LLASCKIHKNADLAKVAAERLLLID--PGNSGAYLALANVYSACGKWENAAQTR---KLM 639
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLID 489
K++ + + + + + + FG+ D
Sbjct: 640 KDRGVRKEKGISWIHIKNEVHAFGVED 666
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 42/242 (17%)
Query: 328 ESGPSPDNATF-TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
E G SP ++ F +L + GR +H Q IK + + N ++T YA+ G++
Sbjct: 2 EVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSL 61
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
+ A F +P+ SWN++I G A G E + L M
Sbjct: 62 RFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMP------------------ 103
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
DC P S +T ++ +FGL D A+ + ++ ++ + S
Sbjct: 104 -------------DC-------DPVS--WTAIIVGYNQFGLFDNAIWMFAKMISERVPPS 141
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS-GVYLILTEMYLSCGRREDAKRIFA 565
+L +C + + +G V++L + V L MY CG AK +F
Sbjct: 142 QFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFD 201
Query: 566 QM 567
+M
Sbjct: 202 RM 203
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 211/631 (33%), Positives = 338/631 (53%), Gaps = 51/631 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++A+ +FD M QR+T +WN ++ K G LD A+ LF MPERD ++N +++G Q
Sbjct: 70 LEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQR 129
Query: 66 DNVQGAKEVFDGMEVRDVV----TWNSMISGYVCNGLIDEALRV-FHGMPLKDVVSWNLV 120
D + A M D V ++ S +S C GL+D ++ V HG+ K S ++
Sbjct: 130 DRFEEALRFVVDMHSEDFVLNEYSFGSALSA--CAGLMDLSIGVQIHGLIAKSRYSLDVY 187
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+G+ L + Y K R VAS A++ FD M +++ +WN
Sbjct: 188 MGSA-------LVDMYSK---CRVVAS----------------AQRAFDDMDVRNIVSWN 221
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK- 239
+I Y NG G A ++F +M + + + + + ++ +AI Q+ K
Sbjct: 222 SLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKH 281
Query: 240 --------TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
N+++ + + V EA ++ P ++ S T+++ GY + V +A +
Sbjct: 282 DKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLM 341
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F M R+V WN +I G +N EE ++ F+ +K P + TF ++L C++L L
Sbjct: 342 FSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADL 401
Query: 352 DLGRQIHAQAI------KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
LGRQ H + K + V N++I MY +CG ++ L F + D +SWN
Sbjct: 402 KLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWN 461
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNK 465
++I G A +GY +ALE+F M ++ +PD +T +GVLSACS+AGLV++GR YF M +
Sbjct: 462 AMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIE 521
Query: 466 YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKV 525
+ L P HYTC+VDLLGR G +DEA NL+ + +E VWG+LL AC++H NI +
Sbjct: 522 HGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTM---PMEPDAVVWGSLLAACKVHGNITL 578
Query: 526 GEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
G+ ER++E++P NSG Y++L+ MY GR +D R+ QM++ GV K+PGCSWI I
Sbjct: 579 GKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQS 638
Query: 586 GGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
HVF+ D HP + +L +L +++R
Sbjct: 639 HLHVFMVKDKRHPHKKDIYLILKILTEQMKR 669
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 126/275 (45%), Gaps = 36/275 (13%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
R+ EA+ +FD+MP RD V+ M+ GY K + A +F+ M ER++ ++N +IAG Q
Sbjct: 303 RVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQ 362
Query: 65 SDNVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEAL-RVFHGMPLKDVVSWNL 119
+ + A +F ++ + T+ ++++ C L D L R H LK
Sbjct: 363 NGENEEAVRLFLLLKRESIWPTHYTFGNLLNA--CANLADLKLGRQAHTHILKHGF---- 416
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
+FK D+ +++ ++ G + + R +F++M +D +W
Sbjct: 417 ----------------WFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSW 460
Query: 180 NLMIAGYLDNGCVGVAEDLFQKM----HDRDLTSWKQLINGLVNSRRIDAAISYFKQMP- 234
N MI GY NG A ++F++M D + +++ ++ ++ YF+ M
Sbjct: 461 NAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTI 520
Query: 235 ----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
+ + ++ +L R G + EA++ ++ P
Sbjct: 521 EHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMP 555
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 111/305 (36%), Gaps = 63/305 (20%)
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ------ 387
D++ F +L C ++ R +HA+ IK + + N ++ +Y +CG ++
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 388 -------------------------SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
AL F +P D SWN+++ G A E+AL
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137
Query: 423 LFERMRLTDFKPDDITFVGVLSACS----------YAGLVDQGRYYFDCMKNKYFLQPRS 472
M DF ++ +F LSAC+ GL+ + RY D + S
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYS 197
Query: 473 --------------------AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+ ++ + G +A+ + + GIE +
Sbjct: 198 KCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLAS 257
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQMKEN 570
+ AC + I+ G RVM+ + + + L L +MY C R +A+ +F +M
Sbjct: 258 VASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317
Query: 571 GVKKE 575
V E
Sbjct: 318 DVVSE 322
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM---PER-DMFTYN 56
M+ +++ + +F++M +RD V+WN MI GY +NG+ A+ +F +M ER D T
Sbjct: 437 MKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMI 496
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVT-----WNSMISGYVCNGLIDEALRVFHGMPL 111
V++ + V+ + F M + + + M+ G +DEA + MP+
Sbjct: 497 GVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPM 556
Query: 112 K-DVVSWNLVIGA 123
+ D V W ++ A
Sbjct: 557 EPDAVVWGSLLAA 569
>gi|242092520|ref|XP_002436750.1| hypothetical protein SORBIDRAFT_10g008110 [Sorghum bicolor]
gi|241914973|gb|EER88117.1| hypothetical protein SORBIDRAFT_10g008110 [Sorghum bicolor]
Length = 672
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 206/621 (33%), Positives = 333/621 (53%), Gaps = 38/621 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R R A+ LFD +P R VTWN + + + A F+ MP RD+ ++NT++A
Sbjct: 47 LRRGRFSAARRLFDALPARSVVTWNSFLAALSRRRDVRAARSFFDAMPMRDIISWNTLLA 106
Query: 61 GL---MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+Q D++ A+ +FD M RD V+W++++ Y GL++EA R+F MP ++ SW
Sbjct: 107 AYARSLQPDHLAAARRLFDEMPQRDAVSWSTLLGAYTRRGLMEEAQRLFDEMPHRNPASW 166
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK-MPAKD- 175
N ++ +M A + F+ M +D AS + MV+G +R G + EA +L K + A D
Sbjct: 167 NTMVTGFFAIGQMRKALNVFEAMPVKDSASLSAMVSGFIRNGWLHEADELLTKRLRAMDM 226
Query: 176 ---VQAWNLMIAGYLDNGCVGVAEDLF--------------QKMHDRDLTSWKQLINGLV 218
V A+N +IA Y G V A LF +++ +R++ SW ++ +
Sbjct: 227 DKAVDAFNTLIAAYGQTGRVTDARRLFSMIPKTQSQHKGHKRRVFERNVVSWNSMMMCYI 286
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+ + +A + F +MP TWN++I+ + ++EA + P + +W +I G
Sbjct: 287 RTGDVCSARALFDEMPFKDLVTWNTMIAGYTQASDMEEAEKLFGEVPAPDAVTWNLMIRG 346
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ + G+V A F+ M + WN MI G +N+ + +K F +M E
Sbjct: 347 FTQKGDVEHARGFFDRMPEQSTITWNTMISGYEQNEDYDCTIKLFQRMLE---------- 396
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
VL C+ L L LG Q+H Q I+ + T +NA++TMY+RCG + SA FS +
Sbjct: 397 -VVLAACASLAMLRLGAQLH-QLIEKSFLPDTATNNALMTMYSRCGELTSAKAIFSQMHT 454
Query: 399 H-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
D++SWN++I G +HG A +AL LF+ MR P ITF+ +LSAC AGLV +G+
Sbjct: 455 QKDLVSWNALIGGYEHHGNATEALRLFQEMRSAKVMPTHITFISLLSACGNAGLVSEGQV 514
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
F M ++Y L PR HY +V+L+GR G +++A+ + I++ I VWGA LGAC
Sbjct: 515 VFHTMVHEYGLAPRVEHYAALVNLIGRHGQLEDALEV---IKSMPIAPDRAVWGAFLGAC 571
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
N + +A + +++P +S Y+++ ++ GR A + M+ G+ K PG
Sbjct: 572 TAKKNEVLAAVAANALSKIDPESSAPYVLMHNLHAHEGRWGSASVVREDMERLGIHKHPG 631
Query: 578 CSWIQINDGGHVFLSGDSSHP 598
SWI ++D HVF+SGD+SHP
Sbjct: 632 YSWIDLHDKVHVFISGDTSHP 652
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 218/657 (33%), Positives = 326/657 (49%), Gaps = 70/657 (10%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG--MEVRD 82
N ++ Y K+ L A LF ++P D T+I N++ +E+F+G + +RD
Sbjct: 52 NRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRD 111
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALV------------- 125
V +N+MI+GY NG AL +F M D ++ V+ ALV
Sbjct: 112 SVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMH 171
Query: 126 --------------------------------NCQRMDLAESYFKEMGARDVASWTIMVN 153
+C M A F EM RD +WT M+
Sbjct: 172 CAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMIT 231
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTS 209
G VR + AR++F+ M AWN MI+GY+ GC A L +KM D +
Sbjct: 232 GYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDIT 291
Query: 210 WKQLINGLVN------SRRIDAAISYFKQMPET--CEKTWNSIISVLIRNGLVKEAHSYL 261
+ +I+ N +++ A I + P C N++I++ +N V EA
Sbjct: 292 YTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIF 351
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
P NI +W ++ GY G + A FE M +++ VMI GL +N G+EGLK
Sbjct: 352 YAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLK 411
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F QM+ G P + F LT CS L L+ GRQ+HAQ + + +V NAMI+MYA
Sbjct: 412 LFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYA 471
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CG +++A F ++P D++SWNS+I L HG+ KA+ELF++M PD ITF+
Sbjct: 472 KCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLT 531
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
VL+ACS+AGLV++GR+YF+ M Y + P HY +VDL R G+ A I D
Sbjct: 532 VLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYA-----RIVID 586
Query: 502 GIEVSP--TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRED 559
+ P VW ALL CRIH N+ +G A E++ +L P N G Y++L+ +Y GR +
Sbjct: 587 SMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNE 646
Query: 560 AKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
++ M++ V+KEP CSWI++ + HVF+ D HP+ + L L E+++
Sbjct: 647 VAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKK 703
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 193/445 (43%), Gaps = 76/445 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
+RN + A+ +F+ M + WN MI GY G A+ L +M + D TY
Sbjct: 234 VRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYT 293
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRD--------VVTWNSMISGYVCNGLIDEALRVFHG 108
T+I+ + Q K+V + + + N++I+ Y N +DEA ++F+
Sbjct: 294 TIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYA 353
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
MP++++++WN ++ VN RM+ A+S+F+EM +++ + T+M++GL + G E KLF
Sbjct: 354 MPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLF 413
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+M + + AG L C ++ L N R++ A +
Sbjct: 414 KQMRLDGFEPCDFAFAGAL-TAC--------------------SVLGALENGRQLHAQLV 452
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
+ E+ N++IS+ + G+V+ A S P ++ SW ++I +G+ G
Sbjct: 453 HLGY--ESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAA---LGQHGHG 507
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+K EL F QM + G PD TF +VLT CS
Sbjct: 508 VKAIEL----------------------------FDQMLKEGVFPDRITFLTVLTACSHA 539
Query: 349 PTLDLGRQ-----IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD-II 402
++ GR + + I + + M+ ++ R G A + S+P
Sbjct: 540 GLVEKGRHYFNSMLESYGITPCEDHYAR----MVDLFCRAGMFSYARIVIDSMPSKPGAP 595
Query: 403 SWNSIICGLAYHGYAEKALELFERM 427
W +++ G HG + +E E++
Sbjct: 596 VWEALLAGCRIHGNMDLGIEAAEQL 620
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 223/644 (34%), Positives = 346/644 (53%), Gaps = 56/644 (8%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ Y K G+ +A LF++MP R F++NTV++ + ++ E FD + RD V
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 85 TWNSMISGYVCNGLIDEALRVFHGM------PLKDVVSWNLVIGALVNCQRM-DLAESYF 137
+W +MI GY G +A+RV M P + ++ L A C S+
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI 172
Query: 138 KEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
++G R +V+ ++N + G + A+ +FD+M +D+ +WN MIA ++ G + +A
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAM 232
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRID-AAISYFKQM-------PE---------TC-- 237
F++M +RD+ +W +I+G N R D A+ F +M P+ C
Sbjct: 233 AQFEQMAERDIVTWNSMISGF-NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACAN 291
Query: 238 -EK---------------------TWNSIISVLIRNGLVKEAHSYLEKYPYSN--IASWT 273
EK N++IS+ R G V+ A +E+ + I +T
Sbjct: 292 LEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFT 351
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++ GY ++G++ A +F + RDV W MI G ++ E + F M G P
Sbjct: 352 ALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRP 411
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
++ T ++L++ S L +L G+QIH A+K +VSNA+ITMYA+ GNI SA F
Sbjct: 412 NSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAF 471
Query: 394 SSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
+ D +SW S+I LA HG+AE+ALELFE M + +PD IT+VGV SAC++AGLV
Sbjct: 472 DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLV 531
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+QGR YFD MK+ + P +HY C+VDL GR GL+ EA + ++ IE WG+
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM---PIEPDVVTWGS 588
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LL ACR+H NI +G++A ER++ LEP NSG Y L +Y +CG+ E+A +I MK+ V
Sbjct: 589 LLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRV 648
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
KKE G SWI++ HVF D +HP+ + + + + EI++
Sbjct: 649 KKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKK 692
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 195/444 (43%), Gaps = 66/444 (14%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PERDMF 53
M+ ++ A F++M +RD VTWN MI G+ + G+ A+ +F++M P+R F
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDR--F 280
Query: 54 TYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
T +V++ + + K++ +VT ISG V N LI R
Sbjct: 281 TLASVLSACANLEKLCIGKQIHS-----HIVTTGFDISGIVLNALISMYSR--------- 326
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARD--VASWTIMVNGLVREGRIVEARKLFDKM 171
C ++ A ++ G +D + +T +++G ++ G + +A+ +F +
Sbjct: 327 -------------CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
+DV AW MI GY +G G A +LF+ M + +++ A++S+ K
Sbjct: 374 KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
Q+ + K+ I SV + N L I Y + G + SA +
Sbjct: 434 QIHGSAVKS-GEIYSVSVSNAL----------------------ITMYAKAGNITSASRA 470
Query: 292 FELM-TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
F+L+ RD W MI L ++ EE L+ F M G PD+ T+ V + C+
Sbjct: 471 FDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGL 530
Query: 351 LDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNSI 407
++ GRQ + +K T+S+ M+ ++ R G +Q A +PI D+++W S+
Sbjct: 531 VNQGRQ-YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSL 589
Query: 408 ICGLAYHGYAEKALELFERMRLTD 431
+ H + ER+ L +
Sbjct: 590 LSACRVHKNIDLGKVAAERLLLLE 613
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 216/644 (33%), Positives = 341/644 (52%), Gaps = 56/644 (8%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ Y K G L A +F++MP + F++NT+I+G + N + ++ + M D V
Sbjct: 49 NNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPV 108
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG-ALVNC---QRMDLA---ESYF 137
+W ++I GY GL D A+ +F M + V + L +C Q +D+ S+
Sbjct: 109 SWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFV 168
Query: 138 KEMGARD-VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
++G V T ++N + G V A+ +FD+M K++ WN +I+ Y+ +G +A
Sbjct: 169 VKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAA 228
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM----------------------- 233
F+KM DRD+ SW +I+G A+ F +M
Sbjct: 229 SQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANL 288
Query: 234 -----------------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN--IASWTN 274
ET N++IS+ ++G V+ A +E SN I ++T+
Sbjct: 289 EKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTS 348
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ GY ++G V A ++F + RDV W MI G +N L + L+ F M GP P+
Sbjct: 349 LLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPN 408
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ T ++L++ S L L+ G+QIHA AIK + +V+NA+I MYA+ GNI A F
Sbjct: 409 SYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFD 468
Query: 395 SVP--IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
+P +I+SW S+I LA HG ++A+ LFERM KPD IT+VGVLSAC++ GLV
Sbjct: 469 -LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLV 527
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+QGR Y++ M + ++P +HY C++DL GR GL+ EA I + IE WG+
Sbjct: 528 EQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLF---IESMPIEPDNIAWGS 584
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LL +C+IH N + ++A ER++ ++P NSG YL L +Y +CG+ E+A + MK+ GV
Sbjct: 585 LLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGV 644
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+KE G SWI I + H F D HP+ + L+ + EI++
Sbjct: 645 RKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKK 688
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 228/507 (44%), Gaps = 77/507 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM---P--ERDMFTY 55
M++ + + A + F+KMP RD V+WN MI GY + G+ A+ +F++M P + D FT
Sbjct: 219 MQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTL 278
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
++++ + + K++ + + T SG V N LI +
Sbjct: 279 ASILSACANLEKLNIGKQIHAYILRAETET-----SGAVGNALISMYAK----------- 322
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
V R+ + + + ++ ++T +++G + G + AR++F+K+ +D
Sbjct: 323 ------SGGVEIARLIVEHNRTSNL---NIIAFTSLLDGYTKLGNVKPAREIFNKLRDRD 373
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
V AW MI GY+ NG A +LF+ M + PE
Sbjct: 374 VVAWTAMIVGYVQNGLWNDALELFRLM---------------------------VNEGPE 406
Query: 236 TCEKTWNSIISV-----LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAI 289
T +++SV ++ +G K+ H+ K S+ S TN ++ Y + G + A
Sbjct: 407 PNSYTLAAMLSVSSSLTILEHG--KQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAK 464
Query: 290 KVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+VF+L +++ W MI L ++ LG+E + F +M G PD+ T+ VL+ C+ +
Sbjct: 465 RVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHV 524
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNA-MITMYARCGNIQSALLEFSSVPIH-DIISWNS 406
++ GR+ + ++ + T A MI +Y R G +Q A L S+PI D I+W S
Sbjct: 525 GLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGS 584
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDD----ITFVGVLSACSYAGLVDQGRYYFDCM 462
++ H A+ A ER+ L D P + + V SAC Q R M
Sbjct: 585 LLASCKIHKNADLAKVAAERLLLID--PGNSGAYLALANVYSACGKWENAAQTR---KLM 639
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLID 489
K++ + + + + + + FG+ D
Sbjct: 640 KDRGVRKEKGISWIHIKNEVHAFGVED 666
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 42/242 (17%)
Query: 328 ESGPSPDNATF-TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
E G SP ++ F +L + GR +H Q IK + + N ++T YA+ G++
Sbjct: 2 EVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSL 61
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
+ A F +P+ SWN++I G A G E + L M
Sbjct: 62 RFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMP------------------ 103
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
DC P S +T ++ +FGL D A+ + ++ ++ + S
Sbjct: 104 -------------DC-------DPVS--WTAIIVGYNQFGLFDNAIWMFAKMISERVPPS 141
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS-GVYLILTEMYLSCGRREDAKRIFA 565
+L +C + + +G V++L + V L MY CG AK +F
Sbjct: 142 QFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFD 201
Query: 566 QM 567
+M
Sbjct: 202 RM 203
>gi|15220741|ref|NP_176416.1| mitochondrial editing factor 9 [Arabidopsis thaliana]
gi|75097094|sp|O04590.1|PPR88_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62260, mitochondrial; Flags: Precursor
gi|2160154|gb|AAB60776.1| F19K23.18 gene product [Arabidopsis thaliana]
gi|332195821|gb|AEE33942.1| mitochondrial editing factor 9 [Arabidopsis thaliana]
Length = 656
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 213/637 (33%), Positives = 325/637 (51%), Gaps = 91/637 (14%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ I EA+++F+K+ R+TVTWN MI GY K ++ A LF+ MP+RD+ T+NT+I+
Sbjct: 51 IRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMIS 110
Query: 61 GLMQSDNV---QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
G + + + A+++FD M RD +WN+MISGY N I EAL +F MP ++ VSW
Sbjct: 111 GYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSW 170
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEA------------- 164
+ +I +D A F++M +D + +V GL++ R+ EA
Sbjct: 171 SAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSG 230
Query: 165 ------------------------RKLFDKMP---------------AKDVQAWNLMIAG 185
R LFD++P K+V +WN MI
Sbjct: 231 REDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKA 290
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
YL G V A LF +M DRD SW +I+G V+ R++ A + F +MP
Sbjct: 291 YLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPN---------- 340
Query: 246 SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV 305
++AHS W ++ GY +G V A FE + WN
Sbjct: 341 ---------RDAHS------------WNMMVSGYASVGNVELARHYFEKTPEKHTVSWNS 379
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
+I +N +E + F++M G PD T TS+L+ + L L LG Q+H +K
Sbjct: 380 IIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTV 439
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYHGYAEKALELF 424
V NA+ITMY+RCG I + F + + ++I+WN++I G A+HG A +AL LF
Sbjct: 440 IPD-VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLF 498
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
M+ P ITFV VL+AC++AGLVD+ + F M + Y ++P+ HY+ +V++
Sbjct: 499 GSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSG 558
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G +EAM ++ + E TVWGALL ACRI+NN+ + +A E + LEP +S Y
Sbjct: 559 QGQFEEAMYIITSM---PFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPY 615
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
++L MY G ++A ++ M+ +KKE G SW+
Sbjct: 616 VLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 184/439 (41%), Gaps = 56/439 (12%)
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
+A N + + +G + A D+F+K+ R+ +W +I+G V R ++ A F MP+
Sbjct: 41 RATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR 100
Query: 237 CEKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE 293
TWN++IS + G ++EA ++ P + SW +I GY + +G A+ +FE
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFE 160
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP---------DNATFTSVLTI 344
M R+ W+ MI G +N + + F +M SP N + +
Sbjct: 161 KMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWV 220
Query: 345 CSDLPTLDLGRQIHAQA-------------IKIARNQFTTVS------------------ 373
+L GR+ A ++ AR F +
Sbjct: 221 LGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKN 280
Query: 374 ----NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
N+MI Y + G++ SA L F + D ISWN++I G + E A LF M
Sbjct: 281 VVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPN 340
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
D ++ G S G V+ R+YF+ K+ + + ++ +
Sbjct: 341 RDAHSWNMMVSGYAS----VGNVELARHYFEKTPEKH-----TVSWNSIIAAYEKNKDYK 391
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
EA++L + +G + P +LL A N+++G + V++ + V+ L
Sbjct: 392 EAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALIT 451
Query: 550 MYLSCGRREDAKRIFAQMK 568
MY CG +++RIF +MK
Sbjct: 452 MYSRCGEIMESRRIFDEMK 470
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 207/660 (31%), Positives = 340/660 (51%), Gaps = 75/660 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----------------- 48
I EA+ +FDKM + V+W ++I GY G + A +F +M
Sbjct: 295 IHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNA 354
Query: 49 ----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
E D+ ++ + + + ++VF+ + RD++ W
Sbjct: 355 FSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAW 414
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR--- 143
N+MI G G +EA ++H M + ++ + L+N A + +E+ +R
Sbjct: 415 NTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVK 474
Query: 144 -----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
D++ +++ R G I +AR LF+KM KD+ +W MI G +G A +
Sbjct: 475 DGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAV 534
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
FQ M L + ++N+ AA+ + +++ + +I GL +AH
Sbjct: 535 FQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQ-----------VIEAGLATDAH 583
Query: 259 SYLEKYPYSNIASWTNVIVGYFEM-GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
N +V + M G V A +VF+ MT RD+ +N MI G ++LG+
Sbjct: 584 V-------------ANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGK 630
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E LK F +++E G PD T+ ++L C++ +L+ ++IH+ +K T++ NA++
Sbjct: 631 EALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALV 690
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
+ YA+CG+ ALL F + ++ISWN+II G A HG + L+LFERM++ KPD +
Sbjct: 691 STYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIV 750
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
TFV +LSACS+AGL+++GR YF M + + P HY C+VDLLGR G +DE L
Sbjct: 751 TFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEAL--- 807
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
I+ + + +WGALLGACRIH N+ V E A E ++L+P+N+ VY+ L+ MY + G
Sbjct: 808 IKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMW 867
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
+ A ++ M++ GV KEPG SWI++ D H F++ D SHP+ ++ L+ L ++ E
Sbjct: 868 DSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKME 927
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 152/594 (25%), Positives = 277/594 (46%), Gaps = 36/594 (6%)
Query: 6 IQEAQNLFDKM--PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
I+EA+ +++K+ +R +WN M+ GY + G+++ A+ L +M + + L+
Sbjct: 192 IEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLL 251
Query: 64 QSDNVQGAKEV-----FDGMEVR---DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
S A E + M+ R DV N +++ Y G I EA VF M K VV
Sbjct: 252 SSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVV 311
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGL-----VREGRIVEARK 166
SW ++IG +C ++A F++M V ++ ++N ++ G+ V +
Sbjct: 312 SWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSH- 370
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ + D+ ++ Y G +F+K+ +RDL +W +I GL + A
Sbjct: 371 ILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEA 430
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLV--------KEAHSYLEKYPYSNIASWTNVIVG 278
+ QM N I V++ N V +E HS + K + S N ++
Sbjct: 431 SEIYHQMQREGMMP-NKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALIS 489
Query: 279 -YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y G + A +F M +D+ W MI GL ++ LG E L F M+++G P+ T
Sbjct: 490 MYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVT 549
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+TS+L CS LD GR+IH Q I+ V+N ++ MY+ CG+++ A F +
Sbjct: 550 YTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMT 609
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
DI+++N++I G A H ++AL+LF+R++ KPD +T++ +L+AC+ +G ++ +
Sbjct: 610 QRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKE 669
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ +L S +V + G +A+ + +++ ++ + W A++G C
Sbjct: 670 IHSLVLKDGYLSDTSLG-NALVSTYAKCGSFSDALLVFDKM----MKRNVISWNAIIGGC 724
Query: 518 RIHNNIK-VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
H + V ++ ME + ++ L G E+ +R F M +
Sbjct: 725 AQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRD 778
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 153/567 (26%), Positives = 264/567 (46%), Gaps = 72/567 (12%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGME--VRDVVTWNSMISGYVCNGLIDEALRVF-- 106
D +T N +I +Q +++ A++V++ + R V +WN+M+ GYV G I+EAL++
Sbjct: 175 DQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLRE 234
Query: 107 ---HGMPLKDVVSWNLVIG----ALVNCQRMDLAESYFKEMGAR---DVASWTIMVNGLV 156
HG+ L + L+ + + C R E + + M AR DV ++N
Sbjct: 235 MQQHGLALGRATTMRLLSSCKSPSALECGR----EIHVEAMKARLLFDVNVANCILNMYA 290
Query: 157 REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
+ G I EAR++FDKM K V +W ++I GY D G +A ++FQKM + +
Sbjct: 291 KCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYIN 350
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVI 276
++N+ AA+ + K + + ++ H S++A T ++
Sbjct: 351 VLNAFSGPAALKWGKT----------------VHSHILNAGHE-------SDLAVGTALV 387
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G +VFE + RD+ WN MI GL E EE + + QM+ G P+
Sbjct: 388 KMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKI 447
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T+ +L C + L GR+IH++ +K +V NA+I+MYARCG+I+ A L F+ +
Sbjct: 448 TYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKM 507
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
DIISW ++I GLA G +AL +F+ M+ KP+ +T+ +L+ACS +D GR
Sbjct: 508 VRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGR 567
Query: 457 ---------------YYFDCMKNKYFL---------------QPRSAHYTCVVDLLGRFG 486
+ + + N Y + Q Y ++
Sbjct: 568 RIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHN 627
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK-VGEIAGERVMELEPNNSGVYL 545
L EA+ L + ++ +G++ + +L AC +++ EI + + +++ +
Sbjct: 628 LGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGN 687
Query: 546 ILTEMYLSCGRREDAKRIFAQMKENGV 572
L Y CG DA +F +M + V
Sbjct: 688 ALVSTYAKCGSFSDALLVFDKMMKRNV 714
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 146/328 (44%), Gaps = 57/328 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFT- 54
R I++A+ LF+KM ++D ++W MI G K+G A+ +F M P R +T
Sbjct: 493 RCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTS 552
Query: 55 -----------------YNTVIAGLMQSD---------------NVQGAKEVFDGMEVRD 82
+ VI + +D +V+ A++VFD M RD
Sbjct: 553 ILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRD 612
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMP---LK-DVVSWNLVIGALVNCQRMDLAES--- 135
+V +N+MI GY + L EAL++F + LK D V++ ++ A N ++ A+
Sbjct: 613 IVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHS 672
Query: 136 -YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
K+ D + +V+ + G +A +FDKM ++V +WN +I G +G
Sbjct: 673 LVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQD 732
Query: 195 AEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT-----WNSII 245
LF++M D+ ++ L++ ++ ++ YF M T + ++
Sbjct: 733 VLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMV 792
Query: 246 SVLIRNGLVKEAHSYLEKYPY-SNIASW 272
+L R G + E + ++ P+ +N W
Sbjct: 793 DLLGRAGQLDEVEALIKTMPFQANTRIW 820
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 109/255 (42%), Gaps = 53/255 (20%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMITMYARC 383
+++ G ++ + +L C ++ L GR++H I+ +Q+T NA+I MY +C
Sbjct: 132 LQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTV--NALINMYIQC 189
Query: 384 GNIQSAL-----LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
G+I+ A L + +H SWN+++ G +GY E+AL+L M+ T
Sbjct: 190 GSIEEARQVWNKLNHTERTVH---SWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRAT 246
Query: 439 FVGVLSACSYAGLVDQGR-YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
+ +LS+C ++ GR + + MK + A+ C++++ + G I EA + ++
Sbjct: 247 TMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVAN--CILNMYAKCGSIHEAREVFDK 304
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
+ + W ++G Y CG
Sbjct: 305 METKSV----VSWTIIIGG----------------------------------YADCGHS 326
Query: 558 EDAKRIFAQMKENGV 572
E A IF +M++ GV
Sbjct: 327 EIAFEIFQKMQQEGV 341
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 193/542 (35%), Positives = 301/542 (55%), Gaps = 37/542 (6%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
+V++ N +I+ ++ +G ++ ALRVF M +K V+WN ++ N
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSN--------------- 48
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
R G+I AR+LFD++P D+ ++N+M+A YL N V A F +
Sbjct: 49 ---------------RRGKIKVARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQ 93
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M +D SW +I+G + +D A F MP +WN++IS + +G + A
Sbjct: 94 MPVKDTASWNTMISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLF 153
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
E P ++ +WT +I G+ + G++ A K FE M +++ WN MI G EN E GLK
Sbjct: 154 EVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLK 213
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F +M ESG P+ ++ +SVL CS+L L LG+Q+H K + T ++++MY
Sbjct: 214 LFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYC 273
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CG+++ A F +P D+++WN++I G A HG EKAL LF++MR KPD ITFV
Sbjct: 274 KCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVA 333
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
VLSAC++AG VD G YF+ M Y ++ + HYTCVVDLLGR G + EA++L+ ++
Sbjct: 334 VLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKM--- 390
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
+ ++G LLGACRIH N+++ E A + ++ L+P ++ Y+ L +Y + R +
Sbjct: 391 PFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVA 450
Query: 562 RIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILFD 621
+ MK+N V K PG SWI++ H F SGD HP+ + LN E+ER++
Sbjct: 451 MVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLN----ELERKMRLA 506
Query: 622 AY 623
Y
Sbjct: 507 GY 508
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 228/463 (49%), Gaps = 45/463 (9%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM-QSDNVQGAKEVFDGM 78
+ ++ N +I + ++G L++A+ +F M + T+N+++AG + ++ A+++FD +
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFK 138
D+ ++N M++ Y+ N ++ A F MP+KD SWN +I MD A F
Sbjct: 64 PEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFL 123
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
M R+ SW M++G V G + A++LF+ P + V AW MI G++ G + +AE
Sbjct: 124 VMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKY 183
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKTWNSIISVLIRNG----- 252
F++M ++L +W +I G + + + + + FK+M E+ +S+ SVL+
Sbjct: 184 FEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSAL 243
Query: 253 -LVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
L K+ H + K P S NI + T+++ Y + G++ A K+F +M +DV WN MI G
Sbjct: 244 KLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGY 303
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
++ GE+ L F +M++ G PD TF +VL+ C+ +DLG +
Sbjct: 304 AQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYF------------ 351
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
N+M+ Y + P H + ++ L G +A++L ++M
Sbjct: 352 ---NSMVRDYG-----------VEAKPDH----YTCVVDLLGRGGKLVEAVDLIKKM--- 390
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSA 473
FKP F +L AC ++ + KN L P SA
Sbjct: 391 PFKPHSAIFGTLLGACRIHKNLELAEF---AAKNLLNLDPESA 430
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 147/355 (41%), Gaps = 43/355 (12%)
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
SN+ S VI + G++ SA++VFE MT + WN M+ G N G+ +K Q+
Sbjct: 3 SNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYS-NRRGK--IKVARQL 59
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF-------TTVSNAMITM 379
+ P PD ++ +L +H ++ AR F T N MI+
Sbjct: 60 FDRIPEPDIFSYNIMLAC-----------YLHNADVESARLFFDQMPVKDTASWNTMISG 108
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
+++ G + A F +P+ + +SWN++I G G + A +LFE + + +
Sbjct: 109 FSQNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSV----VAW 164
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+++ G ++ YF+ M K + + + + GL L +
Sbjct: 165 TAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGL-----KLFKRMV 219
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRRE 558
G +P+ ++L C + +K+G+ + + + + N L MY CG E
Sbjct: 220 ESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLE 279
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
DA ++F M + V +W + +SG + H + YL + + E
Sbjct: 280 DAWKLFLVMPQKDV-----VTW-------NAMISGYAQHGAGEKALYLFDKMRDE 322
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 218/657 (33%), Positives = 325/657 (49%), Gaps = 70/657 (10%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG--MEVRD 82
N ++ Y K+ + A LF ++P D T+I N++ +E+F+G + +RD
Sbjct: 52 NRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRD 111
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALV------------- 125
V +N+MI+GY NG AL +F M D ++ V+ ALV
Sbjct: 112 SVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMH 171
Query: 126 --------------------------------NCQRMDLAESYFKEMGARDVASWTIMVN 153
C M A F EM RD +WT M+
Sbjct: 172 CAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMIT 231
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTS 209
G VR + AR++F+ M AWN MI+GY+ GC A L +KM D +
Sbjct: 232 GYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDIT 291
Query: 210 WKQLINGLVN------SRRIDAAISYFKQMPET--CEKTWNSIISVLIRNGLVKEAHSYL 261
+ +I+ N +++ A I + P C N++I++ +N V EA
Sbjct: 292 YTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIF 351
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
P NI +W ++ GY G + A FE M +++ VMI GL +N G+EGLK
Sbjct: 352 YAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLK 411
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F QM+ G P + F LT CS L L+ GRQ+HAQ + + +V NAMI+MYA
Sbjct: 412 LFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYA 471
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CG +++A F ++P D++SWNS+I L HG+ KA+ELF++M PD ITF+
Sbjct: 472 KCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLT 531
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
VL+ACS+AGLV++GR+YF+ M Y + P HY +VDL R G+ A I D
Sbjct: 532 VLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYA-----RIVID 586
Query: 502 GIEVSP--TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRED 559
+ P VW ALL CRIH N+ +G A E++ +L P N G Y++L+ +Y GR D
Sbjct: 587 SMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWND 646
Query: 560 AKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
++ M++ V+KEP CSWI++ + HVF+ D HP+ + L L E+++
Sbjct: 647 VAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKK 703
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 193/445 (43%), Gaps = 76/445 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
+RN + A+ +F+ M + WN MI GY G A+ L +M + D TY
Sbjct: 234 VRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYT 293
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRD--------VVTWNSMISGYVCNGLIDEALRVFHG 108
T+I+ + Q K++ + + + N++I+ Y N +DEA ++F+
Sbjct: 294 TIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYA 353
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
MP++++++WN ++ VN RM+ A+S+F+EM +++ + T+M++GL + G E KLF
Sbjct: 354 MPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLF 413
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+M + + AG L C ++ L N R++ A +
Sbjct: 414 KQMRLDGFEPCDFAFAGAL-TAC--------------------SVLGALENGRQLHAQLV 452
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
+ E+ N++IS+ + G+V+ A S P ++ SW ++I +G+ G
Sbjct: 453 HLGY--ESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAA---LGQHGHG 507
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+K EL F QM + G PD TF +VLT CS
Sbjct: 508 VKAIEL----------------------------FDQMLKEGVFPDRITFLTVLTACSHA 539
Query: 349 PTLDLGRQ-----IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD-II 402
++ GR + + I + + M+ ++ R G A + S+P
Sbjct: 540 GLVEKGRHYFNSMLESYGITPCEDHYAR----MVDLFCRAGMFSYARIVIDSMPSKPGAP 595
Query: 403 SWNSIICGLAYHGYAEKALELFERM 427
W +++ G HG + +E E++
Sbjct: 596 VWEALLAGCRIHGNMDLGIEAAEQL 620
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 185/499 (37%), Positives = 286/499 (57%), Gaps = 4/499 (0%)
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR-EGRIVEARKLFDKM 171
DVVS N I + V ++ A + F++M R +W M++G + G++ EA +LFDK+
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
P D ++N+M+ YL + V A F KM +D+ SW LI+G + ++ A F
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFS 191
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
MPE +W+++IS + +G ++ A + ++ T ++ GY + G+V A ++
Sbjct: 192 VMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERI 251
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F+ M +++ WN MI G EN E+GLK F M ES P+ + +SVL CS+L L
Sbjct: 252 FQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSAL 311
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
LGRQ+H K ++ TT ++I+MY +CG++ SA F +P D+ISWN++I G
Sbjct: 312 PLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGY 371
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
A HG KAL LF++MR KPD ITFV V+ AC++AG VD G YF MK ++ ++ +
Sbjct: 372 AQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAK 431
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
HYTCV+DLLGR G +DEA++L+ E+ + ++G LLGACRIH N+ + E A
Sbjct: 432 PVHYTCVIDLLGRAGRLDEAVSLIKEM---PFKPHAAIYGTLLGACRIHKNLDLAEFAAR 488
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
++ L+P ++ Y+ L +Y + + + ++ MKE+ V K PG SWI+I H F
Sbjct: 489 NLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFR 548
Query: 592 SGDSSHPKFHRLRYLLNLL 610
S D HP+ + LN L
Sbjct: 549 SSDRLHPELTSIHKKLNEL 567
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 139/475 (29%), Positives = 227/475 (47%), Gaps = 62/475 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFK-NGFLDNAMCLFNQMPERDMFTYNTVI 59
+R ++ A+N+F+KM R TVTWN M+ GY K G + A LF+++PE D +YN ++
Sbjct: 84 VRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIML 143
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
++S V+ A F+ M V+D+ +WN++ISG+ NG + +A +F MP K+ VSW+
Sbjct: 144 VCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSA 203
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
+I V ++ AE +K +G + V T M+ G ++ G++ A ++F +M K++ W
Sbjct: 204 MISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTW 263
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N MIAGY++N C AED L +K +I V + + C
Sbjct: 264 NSMIAGYVEN-C--RAED--------GLKVFKTMIESRVRPNPLSLSSVLL-----GC-- 305
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
S +S L L ++ H + K P S + + T++I Y + G++ SA K+F M +
Sbjct: 306 ---SNLSAL---PLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRK 359
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
DV WN MI G ++ G + L F +M+ PD TF +V+ C+ +DLG
Sbjct: 360 DVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLG---- 415
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
Q K + +F + P+H + +I L G +
Sbjct: 416 VQYFKSMKKEFG----------------------IEAKPVH----YTCVIDLLGRAGRLD 449
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSA 473
+A+ L + M FKP + +L AC +D + +N L P SA
Sbjct: 450 EAVSLIKEM---PFKPHAAIYGTLLGACRIHKNLDLAEF---AARNLLNLDPTSA 498
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 194/403 (48%), Gaps = 30/403 (7%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
+++EA LFDK+P+ D+V++N+M+ Y ++ ++ A+ FN+MP +D+ ++NT+I+G Q
Sbjct: 120 KVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQ 179
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
+ +Q A ++F M ++ V+W++MISGYV +G ++ A ++ + +K VV ++
Sbjct: 180 NGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGY 239
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
+ +++LAE F+ M +++ +W M+ G V R + K+F M V+ L ++
Sbjct: 240 MKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLS 299
Query: 185 GYLDNGCVGV-AEDLFQKMH--------DRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
L GC + A L ++MH +D T+ LI+ +D+A F +MP
Sbjct: 300 SVLL-GCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPR 358
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYFEMGEVGSAIKV 291
+WN++IS ++G ++A +K + ++ VI+ G V ++
Sbjct: 359 KDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQY 418
Query: 292 FELMTTR-----DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
F+ M + +I LG +E + +KE P A + ++L C
Sbjct: 419 FKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSL---IKEMPFKPHAAIYGTLLGACR 475
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
LDL + A + T Y + NI +A
Sbjct: 476 IHKNLDLA--------EFAARNLLNLDPTSATGYVQLANIYAA 510
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 184/499 (36%), Positives = 285/499 (57%), Gaps = 4/499 (0%)
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR-EGRIVEARKLFDKM 171
DVVS N I + V ++ A + F++M R +W M++G + G++ EA +LFDK+
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
P D ++N+M+ YL + V A F KM +D+ SW LI+G + ++ A F
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFS 191
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
MPE +W+++IS + +G ++ A + ++ T ++ GY + G+V A ++
Sbjct: 192 VMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERI 251
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F+ M +++ WN MI G EN E+GLK F M ES P+ + +SVL CS+L L
Sbjct: 252 FQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSAL 311
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
LGRQ+H K ++ TT ++I+MY +CG++ SA F +P D+I+WN++I G
Sbjct: 312 PLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGY 371
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
A HG KAL LF++MR KPD ITFV V+ AC++AG VD G YF MK ++ ++ +
Sbjct: 372 AQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAK 431
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
HYTCV+DLLGR G +DEA++L+ E+ ++G LLGACRIH N+ + E A
Sbjct: 432 PVHYTCVIDLLGRAGRLDEAVSLIKEM---PFTPHAAIYGTLLGACRIHKNLDLAEFAAR 488
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
++ L+P ++ Y+ L +Y + + + ++ MKE+ V K PG SWI+I H F
Sbjct: 489 NLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFR 548
Query: 592 SGDSSHPKFHRLRYLLNLL 610
S D HP+ + LN L
Sbjct: 549 SSDRLHPELTSIHKKLNEL 567
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 210/448 (46%), Gaps = 58/448 (12%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYV-CNGLIDEALRVFHGM 109
D+ + N IA +++ +++ A+ VF+ M VR VTWN+M+SGY G + EA +F +
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
P D VS+N+++ + + A ++F +M +D+ASW +++G + G++ +A LF
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFS 191
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDL------------------------------- 198
MP K+ +W+ MI+GY+++G + AE+L
Sbjct: 192 VMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERI 251
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKTWNSIISVLIRNG----- 252
FQ+M ++L +W +I G V + R + + FK M E+ S+ SVL+
Sbjct: 252 FQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSAL 311
Query: 253 -LVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
L ++ H + K P S + + T++I Y + G++ SA K+F M +DV WN MI G
Sbjct: 312 PLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGY 371
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
++ G + L F +M+ PD TF +V+ C+ +DLG Q K + +F
Sbjct: 372 AQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLG----VQYFKSMKKEFG 427
Query: 371 TVS-----NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
+ +I + R G + A+ +P A +G A + +
Sbjct: 428 IEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMP---------FTPHAAIYGTLLGACRIHK 478
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ L +F ++ + SA Y L +
Sbjct: 479 NLDLAEFAARNLLNLDPTSATGYVQLAN 506
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 194/403 (48%), Gaps = 30/403 (7%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
+++EA LFDK+P+ D+V++N+M+ Y ++ + A+ FN+MP +D+ ++NT+I+G Q
Sbjct: 120 KVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQ 179
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
+ +Q A ++F M ++ V+W++MISGYV +G ++ A ++ + +K VV ++
Sbjct: 180 NGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGY 239
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
+ +++LAE F+ M +++ +W M+ G V R + K+F M V+ L ++
Sbjct: 240 MKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLS 299
Query: 185 GYLDNGCVGV-AEDLFQKMH--------DRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
L GC + A L ++MH +D T+ LI+ +D+A F +MP
Sbjct: 300 SVLL-GCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPR 358
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYFEMGEVGSAIKV 291
TWN++IS ++G ++A +K + ++ VI+ G V ++
Sbjct: 359 KDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQY 418
Query: 292 FELMTTR-----DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
F+ M + +I LG +E + +KE +P A + ++L C
Sbjct: 419 FKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSL---IKEMPFTPHAAIYGTLLGACR 475
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
LDL + A + T Y + NI +A
Sbjct: 476 IHKNLDLA--------EFAARNLLNLDPTSATGYVQLANIYAA 510
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 207/638 (32%), Positives = 353/638 (55%), Gaps = 39/638 (6%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGA 71
+ + +T +N +I Y K G + A +F++MP+ + F++NT+++ +S ++
Sbjct: 31 IIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTM 90
Query: 72 KEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA----LVNC 127
+E+F M RD V+WNS+ISGYVC G + EA++ ++ M V++ N + + LV+
Sbjct: 91 QEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSS 150
Query: 128 QR-MDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLM 182
Q +DL ++ ++ + + LV + G + A ++FD++ ++V +N M
Sbjct: 151 QGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTM 210
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----E 238
I G L +G V ++ LF M +RD SW +I GL+ + A+ F+ M + +
Sbjct: 211 ITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQ 270
Query: 239 KTWNSIISVL-----IRNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEMGEVGS 287
T+ S+++ ++ G KE H+ + + Y++ NV VG Y + V
Sbjct: 271 YTFGSVLTACGGLRALKEG--KEIHTLIIRSGYNH-----NVFVGSALVDMYCKCRSVRY 323
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A VF+ M ++V W M+ G G+N EE ++ F M+ +G PD+ T SV++ C++
Sbjct: 324 AEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCAN 383
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
L +L+ G Q H QA+ F TVSNA+IT+Y +CG+I+ + F + D +SW ++
Sbjct: 384 LASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTAL 443
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
+ G A G A + ++LFERM + KPD +TF+ VLSACS AGLV++G+ YF+ M +
Sbjct: 444 VSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHG 503
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV--WGALLGACRIHNNIKV 525
+ P S HYTC++DL GR G ++EA N +N+ + SP W LL +CR++ N ++
Sbjct: 504 IIPFSDHYTCMIDLFGRAGRLEEAKNFINK-----MPFSPDSIGWATLLSSCRLYGNEEI 558
Query: 526 GEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
G+ A E ++EL+P N Y++L+ +Y + G+ + ++ M+E G +KEPG SWI+
Sbjct: 559 GKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKS 618
Query: 586 GGHVFLSGDSSHPKFHRLRYLLNLL-HTEIEREILFDA 622
++F + D S P ++ L L H IE + DA
Sbjct: 619 KVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDA 656
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 201/476 (42%), Gaps = 60/476 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
++ + Q +F MP RD V+WN +I GY G + A+ +N M + + N +
Sbjct: 83 KSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFS 142
Query: 62 LM----------------------------------------QSDNVQGAKEVFDGMEVR 81
M + V A +VFD ++ R
Sbjct: 143 TMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQER 202
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN----CQRMDLAESYF 137
+VV +N+MI+G + +G++ ++ R+FHGM +D +SW +I L+ + MDL
Sbjct: 203 NVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMR 262
Query: 138 KEMGARD---VASWTIMVNGL--VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
+E A D S GL ++EG+ + + +V + ++ Y V
Sbjct: 263 QEGMAMDQYTFGSVLTACGGLRALKEGKEIHTL-IIRSGYNHNVFVGSALVDMYCKCRSV 321
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVL 248
AE +F++M ++++ SW ++ G + + A+ F M E + T S+IS
Sbjct: 322 RYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSC 381
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNV----IVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
++E + + S + S+ V I Y + G + + ++F+ M+ RD W
Sbjct: 382 ANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWT 441
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK- 363
++ G + E + F +M G PD TF +VL+ CS ++ G+Q +K
Sbjct: 442 ALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKD 501
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAE 418
F+ MI ++ R G ++ A + +P D I W +++ +G E
Sbjct: 502 HGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEE 557
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 147/323 (45%), Gaps = 56/323 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+R+ +++++ LF M +RD+++W MI G +NG AM LF M + D +T+
Sbjct: 215 LRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFG 274
Query: 57 TVI---AGL--------------------------------MQSDNVQGAKEVFDGMEVR 81
+V+ GL + +V+ A+ VF M +
Sbjct: 275 SVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANK 334
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV----NCQRMDLAESYF 137
+VV+W +M+ GY NG +EA+RVF M + + +G+++ N ++ +
Sbjct: 335 NVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFH 394
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ + S+ + N L+ + G I ++ +LFD+M +D +W +++GY G
Sbjct: 395 CQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKAN 454
Query: 194 VAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPE-----TCEKTWNSI 244
DLF++M + D ++ +++ + ++ YF+ M + + +
Sbjct: 455 ETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCM 514
Query: 245 ISVLIRNGLVKEAHSYLEKYPYS 267
I + R G ++EA +++ K P+S
Sbjct: 515 IDLFGRAGRLEEAKNFINKMPFS 537
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 9/227 (3%)
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
+C + +++H IK N T + N +I Y++ GNI A F +P + S
Sbjct: 14 LCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFS 73
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA-CSYAGLVDQGRYYFDCM 462
WN+++ + G E+F M D +++ ++S Y +V+ + Y M
Sbjct: 74 WNTMLSAYSKSGDLSTMQEIFSIMP----NRDGVSWNSLISGYVCYGSVVEAVKTYNSMM 129
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
K+ L ++ ++ L+ G +D + +I G V +L+ ++
Sbjct: 130 KDG-VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVD---MYAK 185
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
+ + +A + E++ N +Y + L G +D+KR+F MKE
Sbjct: 186 MGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKE 232
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 210/639 (32%), Positives = 344/639 (53%), Gaps = 30/639 (4%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R+ A+ L + + N +I Y K LD+A LF++MP+R+ FT+N++I+
Sbjct: 32 RGTRLVHARILMTQFSM-EIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISV 90
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV----SW 117
L +S + A +F M D +WNSM+SG+ + +E+L F M +D + S+
Sbjct: 91 LTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSF 150
Query: 118 NLVIGALVNCQRMDLAESYF----KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
+ A +++ K + DV + +++ + G + A ++F M
Sbjct: 151 GSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIE 210
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
+++ WN +I Y NG A ++F +M D L + + +V++ A+ Q+
Sbjct: 211 RNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQI 270
Query: 234 PETCEKT---------WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE 284
KT N+++ + + V EA ++ N+ S T+++ GY
Sbjct: 271 HARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAAS 330
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
V +A +F MT R+V WN +I G +N EE L+ F +K P + TF ++L+
Sbjct: 331 VKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSA 390
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTT-------VSNAMITMYARCGNIQSALLEFSSVP 397
C++L L LGRQ H +K +F + V N++I MY +CG+I+ F +
Sbjct: 391 CANLADLLLGRQAHTHVLKQGF-EFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMK 449
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
D +SWN+II G A +GY +AL++F +M + KPD +T +GVL ACS+AGLV++GR+
Sbjct: 450 ERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRH 509
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
YF M+ ++ L P HYTC+VDLLGR G ++EA NL I A + VWG+LL AC
Sbjct: 510 YFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNL---IEAMPVNPDAVVWGSLLAAC 565
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
++H NI++G+ A E+++E++P NSG Y++L+ MY GR D R+ M++ GV K+PG
Sbjct: 566 KVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPG 625
Query: 578 CSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
CSWI++ HVFL D SHP ++ +L +L +++R
Sbjct: 626 CSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKR 664
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 114/306 (37%), Gaps = 63/306 (20%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC--------- 383
P+++ F +L C + R +HA+ + + + N +I +Y +C
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 384 ----------------------GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
G + A F S+P D SWNS++ G A H E++L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 422 ELFERMRLTDFKPDDITFVGVLSACS----------YAGLVDQGRYYFD----------- 460
E F +M DF ++ +F LSAC+ LV + RY D
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192
Query: 461 -------CMKNKY--FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
C + + ++ + ++ + G EA+ + + G+E
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLA 252
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQMKE 569
+++ AC +K G RV++ + L L +MY C + +A+R+F +M
Sbjct: 253 SVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI 312
Query: 570 NGVKKE 575
V E
Sbjct: 313 RNVVSE 318
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 15/182 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYN 56
M+ I++ +F+KM +RD V+WN +I GY +NG+ A+ +F +M + D T
Sbjct: 433 MKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMI 492
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVT----WNSMISGYVCNGLIDEALRVFHGMPLK 112
V+ + V+ + F ME ++ + M+ G ++EA + MP+
Sbjct: 493 GVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVN 552
Query: 113 -DVVSWNLVIGALV---NCQRMDLAESYFKEMGARDVASWTIMVN---GLVREGRIVEAR 165
D V W ++ A N + A E+ + + ++ N L R G +V R
Sbjct: 553 PDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVR 612
Query: 166 KL 167
KL
Sbjct: 613 KL 614
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 212/691 (30%), Positives = 346/691 (50%), Gaps = 83/691 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N I A+ LFD MP RD +WN M+ GY + ++ A LF +MPER+ ++ +I+
Sbjct: 137 VQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMIS 196
Query: 61 GLMQSDNVQGAKEVF-----DGMEV----------------------------------R 81
G + + A ++F +GM R
Sbjct: 197 GYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFER 256
Query: 82 DVVTWNSMISGYVCN-GLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
DVV ++++GY + ++D A++ F GM ++ +W+ +I AL R+D A + ++
Sbjct: 257 DVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRD 316
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
+ V S T M+ GL R GRI +A+ LFD++ +V +WN MI GY+ N V AEDLF
Sbjct: 317 PLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFN 376
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAI--------------------SYF---------- 230
+M R+ SW +I G + R + A+ S+F
Sbjct: 377 RMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALET 436
Query: 231 -KQMPETCEKT--------WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFE 281
KQ+ K N++I++ + + ++ + S+ + + +
Sbjct: 437 GKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQ 496
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
A VF M + DV W +I + D G E ++ F M P+ T +
Sbjct: 497 NNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTIL 556
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L + +L LG+QIH AIK+ + V+NA+++MY +C + S L F S+ DI
Sbjct: 557 LGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADS-LKVFDSMEERDI 615
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
+WN+II G A HG +A+ +++ M P+++TFVG+L ACS++GLVD+G +F
Sbjct: 616 FTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKS 675
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
M + Y L P HY C+VDLLGR G + A + + ++ IE +W ALLGAC+IH
Sbjct: 676 MSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDM---PIEPDSVIWSALLGACKIHK 732
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
N+++G A E++ +EP+N+G Y++L+ +Y S G ++ ++ MKE GV K+PGCSW+
Sbjct: 733 NVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWM 792
Query: 582 QINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
QI + H F++GD H + + L L+T
Sbjct: 793 QIKNKMHSFVTGDEEHEQIQNIYATLWELYT 823
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 171/646 (26%), Positives = 284/646 (43%), Gaps = 63/646 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R+ EA+ +FD MP RD + WN MI Y NG D L + + ++ T +++G
Sbjct: 45 RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSG 104
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
++ V+ A+ VFDGM VR+ V WN+M++ YV NG I A ++F MP +DV SWN ++
Sbjct: 105 YARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTML 164
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR----------------EGRIVEAR 165
+ Q M+ A + F+ M R+ SWT+M++G V EG E
Sbjct: 165 TGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQP 224
Query: 166 KLFDKMPA-----------------------KDVQAWNLMIAGYL-DNGCVGVAEDLFQK 201
L + A +DV ++ GY D + A F+
Sbjct: 225 NLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEG 284
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M R+ +W +I L + RID A + +++ P + S+++ L R G + +A
Sbjct: 285 MAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILF 344
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
++ N+ SW +I GY + V A +F M R+ W MI G N E+ L
Sbjct: 345 DQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALV 404
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
+ G P ++ TS CS++ L+ G+Q+H+ A+K + V NA+IT+Y
Sbjct: 405 SLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYG 464
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+ +I S F + + D +S+NS + L + ++A ++F M PD +++
Sbjct: 465 KYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP----SPDVVSWTT 520
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
++SAC+ A ++ F M ++ L P T ++ L G G +
Sbjct: 521 IISACAQADQGNEAVEIFRSMLHEREL-PNPPILTILLGLSGNLGAPQLGQQIHTIAIKL 579
Query: 502 GIEVSPTVWGALLG---ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
G++ V AL+ C +++KV + +E + + + Y G
Sbjct: 580 GMDSGLVVANALVSMYFKCSSADSLKVFD-------SMEERDIFTWNTIITGYAQHGLGR 632
Query: 559 DAKRIFAQMKENGVKKEP--------GCSWIQINDGGHVFLSGDSS 596
+A R++ M GV CS + D GH F SS
Sbjct: 633 EAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSS 678
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
+ R+ T+ +A I R G + A F S+P DII+WNS+I +G + L
Sbjct: 27 VPRSPGTSAQSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSL 86
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
+ + + + I +LS + AG V R FD M
Sbjct: 87 ADAISGGNLRTGTI----LLSGYARAGRVRDARRVFDGM 121
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 185/522 (35%), Positives = 288/522 (55%), Gaps = 34/522 (6%)
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASW 148
MI+ Y NG + +A +F+ +P K WN V C
Sbjct: 1 MITCYTRNGELAKARNLFNLLPYK----WNPVC-----C--------------------- 30
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
MV G + + EAR+LFD MPAKD+ +WN M+ GY NG + + F++M +RD+
Sbjct: 31 NAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVV 90
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
SW +++G V ++++ +F+++P +W +++ R G + EA ++ P N
Sbjct: 91 SWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRN 150
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ +W +I Y + V AI +F M ++ W +I G +E + QM
Sbjct: 151 VVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPY 210
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
PD +TF L+ C+ L L +G+Q+H +K VSNA+ITMYA+CG+I S
Sbjct: 211 RN-KPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISS 269
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A L F + D++SWNS+I A +G +AL+LF +M + PD++TFVG+LSACS+
Sbjct: 270 AELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSH 329
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
GL+DQG F CM Y ++P + HY C+VDLLGR G ++EA L +R I +
Sbjct: 330 VGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQL---VRGMKINANAG 386
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+WGALLGACRIH N+++ + A E+++E EP+ + Y++L+ M GR ++ R+ MK
Sbjct: 387 IWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMK 446
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
E G +K+PG SWI++ + H FLS D +HP+ L ++L L
Sbjct: 447 EKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSL 488
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/430 (30%), Positives = 216/430 (50%), Gaps = 16/430 (3%)
Query: 27 MIRGYFKNGFLDNAMCLFNQMPER-DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVT 85
MI Y +NG L A LFN +P + + N ++AG ++ A+ +FD M +D+V+
Sbjct: 1 MITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVS 60
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV 145
WNSM++GY NG + L+ F M +DVVSWNL++ V ++ + +F+++ +
Sbjct: 61 WNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNT 120
Query: 146 ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
SW M+ G R G+I EAR+LFD+MP ++V AWN MIA Y+ N V A LF +M ++
Sbjct: 121 VSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEK 180
Query: 206 DLTSWKQLINGLVNSRRIDAAISYFKQMP---ETCEKTWNSIISVLIRNGLV---KEAHS 259
+ SW +ING V ++D A QMP + + T+ +S + K+ H
Sbjct: 181 NSISWTTVINGYVRMGKLDEARQLLNQMPYRNKPDQSTFACGLSSCAHLAALQVGKQLHQ 240
Query: 260 YLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
+ K Y+ +N ++ Y + G + SA +F+ + DV WN +I N G E
Sbjct: 241 LVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGRE 300
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH---AQAIKIARNQFTTVSNA 375
LK F +M+ G +PD TF +L+ CS + +D G ++ QA I
Sbjct: 301 ALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNI--EPLAEHYAC 358
Query: 376 MITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
M+ + R G ++ A + I+ + W +++ HG E L F +L +F+P
Sbjct: 359 MVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLE--LAKFAAEKLLEFEP 416
Query: 435 DDITFVGVLS 444
+ +LS
Sbjct: 417 HKTSNYVLLS 426
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 47/218 (21%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER---------- 50
++N + EA +LF +MP++++++W +I GY + G LD A L NQMP R
Sbjct: 162 VQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNKPDQSTFAC 221
Query: 51 ----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
D+F N +I + ++ A+ +F ++ D
Sbjct: 222 GLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFD 281
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQRMDLAESYFKEMG 141
VV+WNS+I+ Y NG EAL++FH M ++ V + +G L C + L + K
Sbjct: 282 VVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFK 341
Query: 142 ARDVA--------SWTIMVNGLVREGRIVEARKLFDKM 171
A + MV+ L R GR+ EA +L M
Sbjct: 342 CMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGM 379
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/508 (38%), Positives = 286/508 (56%), Gaps = 26/508 (5%)
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE-GRIVEARKLFDKMPAKDV 176
N +I V +D A S F M A++ SW ++ G+ ++ R++EA +LFD++P D
Sbjct: 65 NKIIATRVRSGDIDGALSVFHGMRAKNTVSWNSLLVGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
++N+M++ Y+ NG A+ F +M +D SW +I G ++ A F M E
Sbjct: 125 FSYNIMLSCYVRNGNFEKAQSFFNRMPFKDAASWNTMITGYARRGEMEKARVLFYSMMEK 184
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
E +WN++IS I G +++A + + P+ + +WT +I GY + +V A +F+ MT
Sbjct: 185 NEVSWNAMISGYIECGDLEKAAHFFKAAPFRGVVAWTAMITGYMKAKKVELAEAMFKDMT 244
Query: 297 TR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+ ++ WN MI G EN E+GLK F M E G P+++ +S L CS+L L LGR
Sbjct: 245 VKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALCLGR 304
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
QIH I MY +CG + A F ++ D+++WN++I G A HG
Sbjct: 305 QIH-----------------QIVMYCKCGELGDAWKLFEAMKKKDVVAWNAMISGYAQHG 347
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
AEKAL LF MR + KPD ITFV VL AC++AGLVD G YFD M Y ++PR HY
Sbjct: 348 NAEKALCLFHEMRDSKTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVRDYRVEPRPDHY 407
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
TC+VDLLGR G ++EA+ L IR+ V+G LLGACR+H N+++ E A E+++E
Sbjct: 408 TCMVDLLGRAGKVEEALKL---IRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLE 464
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
L+P N+ Y+ L +Y S ED R+ +MKE+ V K PG SWI+I + H F S D
Sbjct: 465 LDPRNAAGYVQLANIYASKNLWEDVARVRKRMKESNVVKVPGYSWIEIRNKIHHFRSSDR 524
Query: 596 SHPKFHRLRYLLNLLHTEIEREILFDAY 623
HP+ + L E+ER++ Y
Sbjct: 525 IHPELDSIHKKLK----ELERKMKLAGY 548
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 191/381 (50%), Gaps = 37/381 (9%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN-GLIDEALRVFH 107
E +F N +IA ++S ++ GA VF GM ++ V+WNS++ G + + EA ++F
Sbjct: 58 EDQIFPLNKIIATRVRSGDIDGALSVFHGMRAKNTVSWNSLLVGISKDPSRMMEAHQLFD 117
Query: 108 GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
+P D S+N+++ V + A+S+F M +D ASW M+ G R G + +AR L
Sbjct: 118 EIPEPDTFSYNIMLSCYVRNGNFEKAQSFFNRMPFKDAASWNTMITGYARRGEMEKARVL 177
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
F M K+ +WN MI+GY++ G + A F+ R + +W +I G + +++++ A
Sbjct: 178 FYSMMEKNEVSWNAMISGYIECGDLEKAAHFFKAAPFRGVVAWTAMITGYMKAKKVELAE 237
Query: 228 SYFKQMPETCEK---TWNSIISVLIRNGLVKEA----HSYLEKYPYSNIASWTNVIVG-- 278
+ FK M T +K TWN++IS + N ++ + LE+ N + ++ ++G
Sbjct: 238 AMFKDM--TVKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCS 295
Query: 279 ----------------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
Y + GE+G A K+FE M +DV WN MI G ++ E+ L
Sbjct: 296 ELSALCLGRQIHQIVMYCKCGELGDAWKLFEAMKKKDVVAWNAMISGYAQHGNAEKALCL 355
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR-----NQFTTVSNAMI 377
F +M++S PD TF +VL C+ +D+G ++ R + +T M+
Sbjct: 356 FHEMRDSKTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVRDYRVEPRPDHYT----CMV 411
Query: 378 TMYARCGNIQSALLEFSSVPI 398
+ R G ++ AL S+P
Sbjct: 412 DLLGRAGKVEEALKLIRSMPF 432
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 174/366 (47%), Gaps = 50/366 (13%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+R+ EA LFD++P+ DT ++N+M+ Y +NG + A FN+MP +D ++NT+I G
Sbjct: 107 SRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNGNFEKAQSFFNRMPFKDAASWNTMITGYA 166
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
+ ++ A+ +F M ++ V+WN+MISGY+ G +++A F P + VV+W +I
Sbjct: 167 RRGEMEKARVLFYSMMEKNEVSWNAMISGYIECGDLEKAAHFFKAAPFRGVVAWTAMITG 226
Query: 124 LVNCQRMDLAESYFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL- 181
+ ++++LAE+ FK+M +++ +W M++G V R + KLF M + ++ +
Sbjct: 227 YMKAKKVELAEAMFKDMTVKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 182 ---------------------MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
I Y G +G A LF+ M +D+ +W +I+G
Sbjct: 287 LSSALLGCSELSALCLGRQIHQIVMYCKCGELGDAWKLFEAMKKKDVVAWNAMISGYAQH 346
Query: 221 RRIDAAISYFKQMPETCEKT-WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
+ A+ F +M ++ K W + ++VL+ N A ++ + Y
Sbjct: 347 GNAEKALCLFHEMRDSKTKPDWITFVAVLL----------------ACNHAGLVDIGMTY 390
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
F+ S ++ + + D + M+ LG EE LK M P A F
Sbjct: 391 FD-----SMVRDYRVEPRPD--HYTCMVDLLGRAGKVEEALKLIRSMPF---RPHAAVFG 440
Query: 340 SVLTIC 345
++L C
Sbjct: 441 TLLGAC 446
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 211/653 (32%), Positives = 338/653 (51%), Gaps = 75/653 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
I+EA+ +FDKM ++ V+W + I GY G + A +F +M + + TY +V+
Sbjct: 177 IEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNA 236
Query: 62 L--------------------MQSDNVQGA---------------KEVFDGMEVRDVVTW 86
+SD G ++VF+ + RD++ W
Sbjct: 237 FSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAW 296
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR--- 143
N+MI G G +EA V++ M + V+ + L+N A + KE+ +R
Sbjct: 297 NTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAK 356
Query: 144 -----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
D+ +++ R G I +AR +FDKM KDV +W MI G +G A +
Sbjct: 357 AGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTV 416
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
+Q+M + + ++N+ AA+ + +++ + ++ GL +AH
Sbjct: 417 YQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQ-----------VVEAGLATDAH 465
Query: 259 SYLEKYPYSNIASWTNVIVGYFEM-GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
N +V + M G V A +VF+ M RD+ +N MI G ++LG+
Sbjct: 466 V-------------GNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGK 512
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E LK F +++E G PD T+ ++L C++ +L+ R+IH K T+V NA++
Sbjct: 513 EALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALV 572
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
+ YA+CG+ A + F + ++ISWN+II G A HG + AL+LFERM++ KPD +
Sbjct: 573 STYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIV 632
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
TFV +LSACS+AGL+++GR YF M + + P HY C+VDLLGR G +DEA L
Sbjct: 633 TFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEAL--- 689
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
I+ + + +WGALLGACRIH N+ V E A E ++L+ +N+ VY+ L+ MY + G
Sbjct: 690 IKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMW 749
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
+ A ++ M++ GV KEPG SWIQ+ D H F++ D SHP+ ++ L+ L
Sbjct: 750 DSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRL 802
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 158/594 (26%), Positives = 274/594 (46%), Gaps = 36/594 (6%)
Query: 6 IQEAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
I+EA+ ++ K+ +R +WN M+ GY + G+++ A+ L QM + + T I +
Sbjct: 74 IEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFL 133
Query: 64 QSDNVQGAKE-----VFDGMEVR---DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
S GA E F M+ DV N +++ Y G I+EA VF M K VV
Sbjct: 134 SSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVV 193
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGL-----VREGRIVEARK 166
SW + IG +C R + A F++M V ++ ++N ++ G+ V +R
Sbjct: 194 SWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSR- 252
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ + D ++ Y G +F+K+ +RDL +W +I GL + A
Sbjct: 253 ILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEA 312
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLV--------KEAHSYLEKYPY-SNIASWTNVIV 277
+ QM N I V++ N V KE HS + K + S+I +I
Sbjct: 313 SEVYNQMQREGVMP-NKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALIS 371
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y G + A VF+ M +DV W MI GL ++ G E L + +M+++G P+ T
Sbjct: 372 MYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVT 431
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+TS+L CS L+ GR+IH Q ++ V N ++ MY+ CG+++ A F +
Sbjct: 432 YTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMI 491
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
DI+++N++I G A H ++AL+LF+R++ KPD +T++ +L+AC+ +G ++ R
Sbjct: 492 QRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWARE 551
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
++ F S +V + G +A + ++ + W A++G
Sbjct: 552 IHTLVRKGGFFSDTSVG-NALVSTYAKCGSFSDASIVFEKMTKRNV----ISWNAIIGGS 606
Query: 518 RIHNNIKVGEIAGERV-MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
H + ER+ ME + ++ L G E+ +R F M ++
Sbjct: 607 AQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQD 660
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 205/455 (45%), Gaps = 66/455 (14%)
Query: 151 MVNGLVREGRIVEARKLFDKMP--AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
++N ++ G I EAR+++ K+ + V +WN M+ GY+ G + A L ++M L
Sbjct: 64 LINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLA 123
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
+ I ++S + A+ + +++ + ++ + L+ + VK A+ L Y
Sbjct: 124 PDRTTIMSFLSSCKSPGALEWGREIH------FQAMQAGLLFD--VKVANCILNMYA--- 172
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ G + A +VF+ M + V W + I G + E + F +M++
Sbjct: 173 ------------KCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQ 220
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
G P+ T+ SVL S L G+ +H++ + T V A++ MYA+CG+ +
Sbjct: 221 EGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKD 280
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC-- 446
F + D+I+WN++I GLA GY E+A E++ +M+ P+ IT+V +L+AC
Sbjct: 281 CRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVN 340
Query: 447 ---------------------------------SYAGLVDQGRYYFDCMKNKYFLQPRSA 473
S G + R FD M K +
Sbjct: 341 SAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVIS---- 396
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV 533
+T ++ L + G EA+ + E++ G+E + + ++L AC ++ G ++V
Sbjct: 397 -WTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQV 455
Query: 534 MELE-PNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+E ++ V L MY CG +DA+++F +M
Sbjct: 456 VEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM 490
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 149/329 (45%), Gaps = 59/329 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTY 55
R I++A+ +FDKM ++D ++W MI G K+GF A+ ++ +M P R +T
Sbjct: 375 RCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTS 434
Query: 56 ---------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRD 82
NT++ +V+ A++VFD M RD
Sbjct: 435 ILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRD 494
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMP---LK-DVVSWNLVIGALVNCQRMDLAESYFK 138
+V +N+MI GY + L EAL++F + LK D V++ ++ A N ++ A
Sbjct: 495 IVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHT 554
Query: 139 EMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ S T + N LV + G +A +F+KM ++V +WN +I G +G
Sbjct: 555 LVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQD 614
Query: 195 AEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPE------TCEKTWNSI 244
A LF++M D+ ++ L++ ++ ++ YF M + T E + +
Sbjct: 615 ALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEH-YGCM 673
Query: 245 ISVLIRNGLVKEAHSYLEKYPY-SNIASW 272
+ +L R G + EA + ++ P+ +N W
Sbjct: 674 VDLLGRAGQLDEAEALIKTMPFQANTRIW 702
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 193/574 (33%), Positives = 314/574 (54%), Gaps = 26/574 (4%)
Query: 41 MCLFNQMPERDMFT--YNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGL 98
+CLF + T N +++ +++ + A+ +F+ M V + MI GY G
Sbjct: 37 ICLFGTKKLSILTTPPSNYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGR 96
Query: 99 IDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE 158
+++AL++F+ MP+KD++SWN ++ + C + +A + F +M R+V SWT ++NGL+
Sbjct: 97 LEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEF 156
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL- 217
GR+ A LF MP KDV AWN M+ G+ NG V A +LF+KM +R++ SW +I GL
Sbjct: 157 GRVEVAECLFRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLD 216
Query: 218 VNSRRIDAAISYFKQMPE-------------TCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
N R +A + + K + C I V I +VK + + E
Sbjct: 217 HNGRSFEALVVFHKMLASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYI 276
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
S I+ + N + + +A +F +R+V VW ++ G G N + L+ F
Sbjct: 277 SASLISFYANCKL-------IDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFK 329
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
M P+ ++ TS L C L +D GR++HA A K+ VSN+++ MY +CG
Sbjct: 330 GMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCG 389
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+I + F+ + +++SWNSII G A HG+ AL LF +M T PD+IT G+LS
Sbjct: 390 HINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLS 449
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
AC ++G++ +GR +F + ++ + HY+ +VDLLGR+G ++EA L++ + +
Sbjct: 450 ACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPG---K 506
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ VW ALL + H+N+ V E A + V++L+PN S Y +L+ +Y S G+ + +I
Sbjct: 507 ANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIR 566
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+MK+ G+ K+PG SWI I H F+SGD SHP
Sbjct: 567 KKMKDEGILKQPGSSWITIKGIKHNFISGDQSHP 600
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 201/442 (45%), Gaps = 59/442 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+RN RI EA++LF+KM + +MI GY G L++A+ LF +MP +D+ ++N+++
Sbjct: 61 LRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDLISWNSMLK 120
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ ++ A +FD M R+VV+W ++I+G + G ++ A +F MP KDV +WN +
Sbjct: 121 GCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRVMPTKDVTAWNSM 180
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM--------- 171
+ + R++ A F++M R+V SWT ++ GL GR EA +F KM
Sbjct: 181 VHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKMLASFKATSS 240
Query: 172 --------------PAKDVQAWNLMI-AGYLDNGCVGV--------------AEDLFQKM 202
P VQ L++ GY N + A +F
Sbjct: 241 TLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDN 300
Query: 203 HDRDLTSWKQLINGL-VNSRRIDAAISYFKQMPETCEKTWNSIISVL--------IRNGL 253
R++ W L+ G +N R DA + M + +S+ S L + G
Sbjct: 301 VSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRG- 359
Query: 254 VKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+E H+ K S+I +++V Y + G + I VF M+ ++V WN +I G +
Sbjct: 360 -REVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQ 418
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ-----AIKIARN 367
+ G L F QM + PD T +L+ C L GR I++
Sbjct: 419 HGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNE 478
Query: 368 QFTTVSNAMITMYARCGNIQSA 389
+++ M+ + R G ++ A
Sbjct: 479 HYSS----MVDLLGRYGQLEEA 496
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 210/692 (30%), Positives = 346/692 (50%), Gaps = 113/692 (16%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFL------------------------- 37
+ +++EA+ LF+KMP+RD+V+WN M+ GYF NG L
Sbjct: 83 SGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLHGFAEK 142
Query: 38 -----------------------DNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEV 74
D A +F + P +F +N++I G + +V+ A E+
Sbjct: 143 FDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALEL 202
Query: 75 FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM------------------------- 109
F M RD V+WN+MIS +G E L F M
Sbjct: 203 FAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDL 262
Query: 110 --------------PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGL 155
P DV + +I C R++ A F + + SWT ++ G+
Sbjct: 263 EWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGV 322
Query: 156 VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
+ G EA LF++M V + +A L GV + +D++ +QL
Sbjct: 323 AQAGFQEEALVLFNQMREVPVASDQFTLATVL-----GVC------LSQKDISIGEQLHA 371
Query: 216 GLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNV 275
+ +R +D+++ N+++++ + G V +A+ E P +I SWT +
Sbjct: 372 HTI-TRGLDSSV-----------PVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAM 419
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
I + + G+V A + F+ M R+V WN M+ + EEGLK ++QM G D
Sbjct: 420 ITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDW 479
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
TF++ ++ C+DL L LG QI AQA K+ + +V+N+++TMY+RCG I+ A FSS
Sbjct: 480 ITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSS 539
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+ + +++SWN+++ G A +G K +E+FE+M PD I++V VLS CS++G V +G
Sbjct: 540 IVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEG 599
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
+YYF M + + P S H+ C+VDLLGR G +++A NL+N++ + + +WGALL
Sbjct: 600 QYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMP---FKPNAAIWGALLA 656
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
ACRIH N K+ E+A + ++EL+ G Y +L +Y G+ + + M++ GV+K
Sbjct: 657 ACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKN 716
Query: 576 PGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
PGCSWI++++ HVF D++HP+ + +L
Sbjct: 717 PGCSWIEVDNRVHVFTVDDTNHPQIKDVHRML 748
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 179/376 (47%), Gaps = 46/376 (12%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
A+ +F G++ + N +++ Y GLI +A RVF G+ +V SWN
Sbjct: 28 AQLIFMGLK-SSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWN------------ 74
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
M++G G++ EA KLF+KMP +D +WN M++GY NG
Sbjct: 75 -------------------TMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNG 115
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
+ E + ++G + + D I +TC +T S++ + I+
Sbjct: 116 EL---EATIKASGSLGYLKLALQLHGF--AEKFDFGI-------DTCVET--SVLDMYIK 161
Query: 251 NGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
G + A + P ++ W ++I GY + G V A+++F M RD WN MI L
Sbjct: 162 CGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISIL 221
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
++ G E L F++M G P++ T+ SVL+ C+ + L+ G +HA+ +++
Sbjct: 222 SQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDV 281
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
+I MYA+CG ++SA F + H+ +SW S+I G+A G+ E+AL LF +MR
Sbjct: 282 YAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREV 341
Query: 431 DFKPDDITFVGVLSAC 446
D T VL C
Sbjct: 342 PVASDQFTLATVLGVC 357
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 134/365 (36%), Gaps = 81/365 (22%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP----- 333
Y G + A +VF + +V WN MI G ++ E K F +M E
Sbjct: 49 YSNCGLISDAYRVFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMM 108
Query: 334 ----DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC------ 383
N + + L L L Q+H A K T V +++ MY +C
Sbjct: 109 SGYFHNGELEATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFA 168
Query: 384 -------------------------GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
G+++ AL F+ +P D +SWN++I L+ HG+
Sbjct: 169 QKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGA 228
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACS------------------------YA--GLV 452
+ L F M F+P+ +T+ VLSAC+ YA GL+
Sbjct: 229 ETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLI 288
Query: 453 D---------QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
D R FD + + + +T ++ + + G +EA+ L N++R +
Sbjct: 289 DMYAKCGRLESARQVFDGLT-----EHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPV 343
Query: 504 EVSPTVWGALLGACRIHNNIKVGE-IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
+LG C +I +GE + + ++ V L MY CG A
Sbjct: 344 ASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANH 403
Query: 563 IFAQM 567
F M
Sbjct: 404 AFELM 408
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F + C+ L ++ + R++HAQ I + + N ++ MY+ CG I A F +
Sbjct: 7 FYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIM 66
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
++ SWN++I G A G +A +LFE+M D
Sbjct: 67 FPNVYSWNTMISGFADSGQMREAEKLFEKMPERD 100
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 20/184 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNT 57
R +I+EAQ +F + ++ V+WN M+ GY +NG + +F +M D +Y +
Sbjct: 526 RCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVS 585
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
V++G S V + F M ++ M +VC G +++A + + MP
Sbjct: 586 VLSGCSHSGFVSEGQYYFLSMTKDHGIS--PMSEHFVCMVDLLGRAGQLEQAKNLINQMP 643
Query: 111 LK-DVVSWNLVIGALV---NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRI---VE 163
K + W ++ A N + +LA E+ A S+ ++ N G+I
Sbjct: 644 FKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTN 703
Query: 164 ARKL 167
RKL
Sbjct: 704 VRKL 707
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 209/648 (32%), Positives = 333/648 (51%), Gaps = 61/648 (9%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV--RD 82
N +I Y K+ LD A LF+++ E D T+++G S ++ A+ VF+ V RD
Sbjct: 53 NRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRD 112
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFK 138
V +N+MI+G+ N A+ +F M + D ++ V+ L + F
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFH 172
Query: 139 EMGARDVASWTIMV-NGLVR--------EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
+ A + V N LV + ARK+FD +P KD ++W M+ GY+ N
Sbjct: 173 AAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKN 232
Query: 190 GCVGVAEDLFQKMHDR-DLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTW--- 241
GC + ++L + M + L ++ +I+G VN A+ ++M E E T+
Sbjct: 233 GCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSV 292
Query: 242 -------------------------------NSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
NS++++ + G EA + EK P ++
Sbjct: 293 IRACANARLLQLGKQVHAYVLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLV 352
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
SW ++ GY G +G A +F+ M +++ W +MI GL EN GEEGLK F MK G
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
P + F+ + C+ L G+Q HAQ +KI + + NA+ITMYA+CG ++ A
Sbjct: 413 FEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQ 472
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F ++P D +SWN++I L HG+ +A++++E M +PD ITF+ VL+ACS+AG
Sbjct: 473 QVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAG 532
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT-- 508
LVDQGR YF+ M+ Y + P + HY ++DLL R G EA +++ + + PT
Sbjct: 533 LVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESII-----ESLPFKPTAE 587
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+W ALL CR+H N+++G IA +++ L P + G Y++L+ MY + G+ E+ R+ M+
Sbjct: 588 IWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMR 647
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+ GVKKE CSWI++ H FL D+SHP+ + L L E+ R
Sbjct: 648 DRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRR 695
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 194/593 (32%), Positives = 330/593 (55%), Gaps = 24/593 (4%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ Y K + A +F+QMP+R+++++NT+++ + + + VF M RD+V
Sbjct: 48 NNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMV 107
Query: 85 TWNSMISGYVCNGLIDEALRVFHGM----PL---KDVVSWNLVIGALVNCQRMDL-AESY 136
+WNS+IS Y G + ++++ ++ M P + +S L++ + C + L +
Sbjct: 108 SWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGH 167
Query: 137 FKEMGARD-VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
+ G + V + +V+ + G + AR+ FD+MP K+V +N +IAG + + +
Sbjct: 168 VVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDS 227
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWNSIISVLIRNGLV 254
LF M ++D SW +I G + AI F++M E E + SVL G V
Sbjct: 228 RQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGV 287
Query: 255 ------KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
K+ H+Y+ + Y NI + ++ Y + + SA VF M ++V W M+
Sbjct: 288 MALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAML 347
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
G G+N EE +K F M+ +G PD+ T SV++ C++L +L+ G Q H +A+
Sbjct: 348 VGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLI 407
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
F TVSNA++T+Y +CG+I+ + FS + D +SW +++ G A G A + L LFE M
Sbjct: 408 SFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESM 467
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
FKPD +TF+GVLSACS AGLV +G F+ M ++ + P HYTC++DL R G
Sbjct: 468 LAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGR 527
Query: 488 IDEAMNLLNEIRADGIEVSPTV--WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL 545
++EA +N+ + SP W +LL +CR H N+++G+ A E +++LEP+N+ Y+
Sbjct: 528 LEEARKFINK-----MPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYI 582
Query: 546 ILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+L+ +Y + G+ E+ + M++ G++KEPGCSWI+ + H+F + D S+P
Sbjct: 583 LLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNP 635
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 147/333 (44%), Gaps = 57/333 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
MR +RI++++ LF M ++D+++W MI G+ +NG A+ LF +M E D +T+
Sbjct: 219 MRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFG 278
Query: 57 TVI---AGLM--------------------------------QSDNVQGAKEVFDGMEVR 81
+V+ G+M + +++ A+ VF M +
Sbjct: 279 SVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCK 338
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV----NCQRMDLAESYF 137
+VV+W +M+ GY NG +EA+++F M + + +G+++ N ++ +
Sbjct: 339 NVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFH 398
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ S+ + N LV + G I ++ +LF +M D +W +++GY G
Sbjct: 399 CRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKAN 458
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET---------CEKTWNSI 244
LF+ M K G++++ + Q+ E+ E + +
Sbjct: 459 ETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCM 518
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIA-SWTNVI 276
I + R G ++EA ++ K P+S A W +++
Sbjct: 519 IDLFSRAGRLEEARKFINKMPFSPDAIGWASLL 551
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 98/233 (42%), Gaps = 15/233 (6%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+ +L C D ++IH IK RN + N +++ YA+ I A F +P
Sbjct: 18 YCELLKHCRDT------KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMP 71
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
++ SWN+++ + + +F M D +++ ++SA + G + Q
Sbjct: 72 QRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDM----VSWNSLISAYAGRGFLLQSVK 127
Query: 458 YFDCM-KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
++ M N F R A T ++ L + G + + + + G + V L+
Sbjct: 128 AYNLMLYNGPFNLNRIALSTMLI-LASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVD- 185
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
+++ + A + E+ N +Y L + C R ED++++F M+E
Sbjct: 186 --MYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQE 236
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 197/567 (34%), Positives = 304/567 (53%), Gaps = 26/567 (4%)
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+I + S + A+EVF+ + V + MI+GY + + +AL +F MP++DVVS
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVS 99
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
WN +I V C M+ A F EM R V SWT MVNG R G++ +A +LF +MP KD
Sbjct: 100 WNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDT 159
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
AWN M+ GYL G V A LF++M +++ SW +I GL + R A+ FK M
Sbjct: 160 AAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 237 CEKTWNSIISVLIR--------------NGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
C K+ + + +I +GL+ + E+Y +++ I Y
Sbjct: 220 CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASL------ITFYANC 273
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
+G + KVF+ V VW ++ G N E+ L F M + P+ +TF S L
Sbjct: 274 KRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGL 333
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
CS L TLD G+++H A+K+ V N+++ MY+ GN+ A+ F + I+
Sbjct: 334 NSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIV 393
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
SWNSII G A HG + A +F +M + +PD+ITF G+LSACS+ G +++GR F M
Sbjct: 394 SWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM 453
Query: 463 KNKY-FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
+ + + HYTC+VD+LGR G + EA L+ + ++ + VW ALL ACR+H+
Sbjct: 454 SSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV---VKPNEMVWLALLSACRMHS 510
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
++ GE A + L+ +S Y++L+ +Y S GR + ++ +MK+NG+ K+PG SW+
Sbjct: 511 DVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWV 570
Query: 582 QINDGGHVFLSGDSSHPK--FHRLRYL 606
I H F SGD H + +L +L
Sbjct: 571 VIRGKKHEFFSGDQPHCSRIYEKLEFL 597
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 248/562 (44%), Gaps = 88/562 (15%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
RI EA+ +F+++P + MI GY ++ L +A+ LF++MP RD+ ++N++I+G ++
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVE 109
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
++ A ++FD M R VV+W +M++G +G +D+A R+F+ MP+KD +WN ++
Sbjct: 110 CGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGY 169
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM------------- 171
+ ++D A FK+M ++V SWT M+ GL + R EA LF M
Sbjct: 170 LQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFT 229
Query: 172 ---------PA--KDVQAWNL---------------MIAGYLDNGCVGVAEDLFQKMHDR 205
PA +Q L +I Y + +G + +F +
Sbjct: 230 CVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHE 289
Query: 206 DLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLV---KEAH 258
+ W L++G +++ + A+S F M + T+ S ++ G + KE H
Sbjct: 290 QVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMH 349
Query: 259 SYLEKYPYSNIASWTN-VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
K A N ++V Y + G V A+ VF + + + WN +I G ++ G+
Sbjct: 350 GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGK 409
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH---AQAIKIARNQFTTVSN 374
F QM PD TFT +L+ CS L+ GR++ + I + +
Sbjct: 410 WAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYT- 468
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
M+ + RCG ++ +A EL ERM + KP
Sbjct: 469 CMVDILGRCGKLK-------------------------------EAEELIERMVV---KP 494
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
+++ ++ +LSAC VD+G + N SA Y + ++ G L
Sbjct: 495 NEMVWLALLSACRMHSDVDRGEKAAAAIFN--LDSKSSAAYVLLSNIYASAGRWSNVSKL 552
Query: 495 LNEIRADGIEVSP-TVWGALLG 515
+++ +GI P + W + G
Sbjct: 553 RVKMKKNGIMKKPGSSWVVIRG 574
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 199/550 (36%), Positives = 296/550 (53%), Gaps = 20/550 (3%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
A+EVFD + V + MISGY + + +AL +F MPL+DVVSWN +I V C +
Sbjct: 54 AREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDI 113
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
D A F EM R V SWT MVNG R G + +A +LF +MP KD+ AWN M+ GYL G
Sbjct: 114 DTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDIAAWNAMVHGYLQFG 173
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
V A LF++M +++ SW +I GL + R A++ FK M C K+ + + +I
Sbjct: 174 KVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVIT 233
Query: 251 N-------GLVKEAHSYLEK--YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
+ + H ++ K + Y + ++I Y + KVF M V
Sbjct: 234 ACANAPAFHMGTQVHGFIIKSGFLYEEYVT-ASLITLYANCKRTEDSRKVFGEMVHEKVA 292
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
VW ++ G N E+ L F +M + P+ +TF S L CS L TLD G++IH A
Sbjct: 293 VWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVA 352
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
+K+ V N+++ MY+ GN+ A+ F + I+SWNSII G A HG + A
Sbjct: 353 VKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAF 412
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR---YYFDCMKNKYFLQPRSAHYTCV 478
+F +M + +PD+ITF G+LSACS+ G + +GR YY N + + HYTC+
Sbjct: 413 VIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNH--IDRKIQHYTCM 470
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
VD+LGR G + EA L+ + ++ + VW ALL ACR+H+++ GE A + L+
Sbjct: 471 VDILGRCGELKEAEKLIESMV---VKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDS 527
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH- 597
+S Y++L+ +Y S GR ++ +MK+ G+ K+PG SW+ I H F SGD H
Sbjct: 528 KSSAAYVLLSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGDRPHC 587
Query: 598 -PKFHRLRYL 606
F +L +L
Sbjct: 588 LRIFEKLEFL 597
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 156/297 (52%)
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
R+ EAR++FD++P+ V + MI+GY + + A +LF +M RD+ SW +I+G V
Sbjct: 50 RLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVE 109
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
ID A+ F +MPE +W ++++ R G+V +A + P +IA+W ++ GY
Sbjct: 110 CGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDIAAWNAMVHGY 169
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G+V A+K+F+ M ++V W MI GL +N+ E L F M + TFT
Sbjct: 170 LQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFT 229
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
V+T C++ P +G Q+H IK V+ ++IT+YA C + + F +
Sbjct: 230 CVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHE 289
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+ W +++ G + + E AL +F M P+ TF L++CS G +D G+
Sbjct: 290 KVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGK 346
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 147/566 (25%), Positives = 251/566 (44%), Gaps = 92/566 (16%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
N R+ EA+ +FD++P + MI GY ++ L +A+ LF++MP RD+ ++N++I+G
Sbjct: 48 NRRLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGC 107
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
++ ++ A ++FD M R VV+W +M++G G++D+A R+F MP+KD+ +WN ++
Sbjct: 108 VECGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDIAAWNAMVH 167
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM----------- 171
+ ++D A FK+M ++V SWT M+ GL + R EA LF M
Sbjct: 168 GYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRT 227
Query: 172 -----------PA--KDVQAWNLMI-AGYLDNGCVGVA-----------ED---LFQKMH 203
PA Q +I +G+L V + ED +F +M
Sbjct: 228 FTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMV 287
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLV---KE 256
+ W L++G +R+ + A++ F +M + T+ S ++ G + KE
Sbjct: 288 HEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKE 347
Query: 257 AHSYLEKYPYSNIASWTN-VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
H K +A N ++V Y + G V A+ VF + + + WN +I G ++
Sbjct: 348 IHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGR 407
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ----IHAQAIKIARN-QFT 370
G+ F QM PD TFT +L+ CS L GR+ I + I R Q
Sbjct: 408 GKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHY 467
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
T M+ + RCG ++ +A +L E M +
Sbjct: 468 T---CMVDILGRCGELK-------------------------------EAEKLIESMVV- 492
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
KP+++ ++ +LSAC VD+G + N SA Y + ++ G
Sbjct: 493 --KPNEMVWLALLSACRMHSDVDRGEKAAAAIFN--LDSKSSAAYVLLSNIYASAGRWSS 548
Query: 491 AMNLLNEIRADGIEVSP-TVWGALLG 515
L +++ GI P + W + G
Sbjct: 549 VSKLRVKMKQKGIMKKPGSSWVVIRG 574
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 247 VLIRNGLVK----EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
VLI N L+ EA ++ P +++ +T +I GY + A+ +F+ M RDV
Sbjct: 40 VLICNHLLNRRLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVS 99
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
WN MI G E + +K F +M P ++T+++ C +D ++ Q
Sbjct: 100 WNSMISGCVECGDIDTAVKMFDEM----PERSVVSWTAMVNGCFRFGMVDQAERLFCQ-- 153
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
+ NAM+ Y + G + AL F +P ++ISW ++ICGL + + +AL
Sbjct: 154 --MPVKDIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALN 211
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
LF+ M K TF V++AC+ A G
Sbjct: 212 LFKNMLRCCIKSTSRTFTCVITACANAPAFHMG 244
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 200/620 (32%), Positives = 346/620 (55%), Gaps = 28/620 (4%)
Query: 18 QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
Q D+ ++ + + G +D A LF ++ E +F N+++ G +++ V A E+FD
Sbjct: 170 QDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDS 229
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMD----- 131
M RDVV+WN M+S +G + EAL + M K V + +L C R+
Sbjct: 230 MPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWG 289
Query: 132 --LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
L + + D + +V + G EA+ +F+ + ++ AW ++IAG+L +
Sbjct: 290 KQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQH 349
Query: 190 GCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMPETCEKTW---- 241
GC + +LF +M +T + LI+G + R+D + +Q+ C K+
Sbjct: 350 GCFTESVELFNQMRAELMTLDQFALATLISGCCS--RMDLCLG--RQLHSLCLKSGQIQA 405
Query: 242 ----NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
NS+IS+ + ++ A S +I SWT++I + ++G + A + F+ M+T
Sbjct: 406 VVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMST 465
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFF-VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
++V WN M+ ++ E+GL+ + V + E PD T+ ++ C+DL LG Q
Sbjct: 466 KNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQ 525
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
I + +K+ T+V+NA+ITMY++CG I A F + + DI+SWN++I G + HG
Sbjct: 526 IIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGM 585
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
++A+E+F+ + KPD I++V VLS CS++GLV +G+ YFD MK + + P H++
Sbjct: 586 GKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFS 645
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
C+VDLLGR G + EA +L++E+ ++ + VWGALL AC+IH N ++ E+A + V EL
Sbjct: 646 CMVDLLGRAGHLTEAKDLIDEMP---MKPTAEVWGALLSACKIHGNNELAELAAKHVFEL 702
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSS 596
+ +SG Y+++ ++Y G+ +D+ +I M++ G+KK PG SW+++N+ HVF + D S
Sbjct: 703 DSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVS 762
Query: 597 HPKFHRLRYLLNLLHTEIER 616
HP+ +R L+ L +I R
Sbjct: 763 HPQVIAIRKKLDELMEKIAR 782
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 141/574 (24%), Positives = 238/574 (41%), Gaps = 94/574 (16%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGA 71
L + + +T NVM+ GY K G L +A+ LF +MP RD+ ++NT+++G QS +
Sbjct: 62 LLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLAS 121
Query: 72 KEVFDGMEVRDVVTWNSMISGYV---CNGLIDEALRV-FHGMPLK-------DVVSWNLV 120
E F M + N+ Y C L + +L + GM K DV + +
Sbjct: 122 LESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAA--AL 179
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ V C +DLA F + + M+ G V+ + A +LFD MP +DV +WN
Sbjct: 180 VDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWN 239
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVN------SRRIDAAISYF 230
+M++ +G V A D+ M + D T++ + +++ A +
Sbjct: 240 MMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV--I 297
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+ +P ++++ + + G KEA N +WT +I G+ + G
Sbjct: 298 RNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCF----- 352
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
E ++ F QM+ + D ++++ C
Sbjct: 353 --------------------------TESVELFNQMRAELMTLDQFALATLISGCCSRMD 386
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
L LGRQ+H+ +K + Q VSN++I+MYA+C N+QSA F + DI+SW S+I
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITA 446
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
+ G KA E F+ M + IT+ +L A G + G ++ M ++ ++P
Sbjct: 447 HSQVGNIAKAREFFDGMSTKNV----ITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRP 502
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
Y + G D N L D I I +KVG I
Sbjct: 503 DWVTYVTLFK-----GCADLGANKL----GDQI---------------IGRTVKVGLIL- 537
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
++ V + MY CGR +A+++F
Sbjct: 538 ---------DTSVANAVITMYSKCGRILEARKVF 562
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 202/622 (32%), Positives = 345/622 (55%), Gaps = 32/622 (5%)
Query: 18 QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
Q D+ ++ + + G +D A LF ++ E MF N+++AG +++ V A E+FD
Sbjct: 190 QDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDS 249
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMD----- 131
M RDVV+WN M+S +G + EAL + M K V + +L C R+
Sbjct: 250 MPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWG 309
Query: 132 --LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
L + + D + +V + G EA+ +F+ + ++ AW ++I+G+L
Sbjct: 310 KQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQY 369
Query: 190 GCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMPETCEKTW---- 241
GC + +LF +M +T + LI+G + R+D + +Q+ C K+
Sbjct: 370 GCFTESVELFNQMRAELMTLDQFALATLISGCCS--RMDLCLG--RQLHSLCLKSGQIQA 425
Query: 242 ----NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
NS+IS+ + ++ A + +I SWT++I Y ++G V A + F+ M+
Sbjct: 426 VVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSE 485
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFF-VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
++V WN M+ ++ E+GL+ + V + E PD T+ ++ C+DL LG Q
Sbjct: 486 KNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQ 545
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
I + +K+ T+V+NA+ITMY++CG I A F + + DI+SWN++I G + HG
Sbjct: 546 IIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGM 605
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
++A+E+F+ + KPD I++V VLS CS++GLV +G++YFD MK + + P H++
Sbjct: 606 GKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFS 665
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGERVM 534
C+VDLLGR G + EA +L+ D + + PT VWGALL AC+IH N ++ E+A + V
Sbjct: 666 CMVDLLGRAGHLTEAKDLI-----DDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVF 720
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
EL+ +SG Y+++ ++Y G+ +D+ +I M++ G+KK PG SW+++++ HVF + D
Sbjct: 721 ELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADD 780
Query: 595 SSHPKFHRLRYLLNLLHTEIER 616
SHP+ +R L+ L +I R
Sbjct: 781 VSHPQVLAIRKKLDELMEKIAR 802
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 245/562 (43%), Gaps = 64/562 (11%)
Query: 25 NVMIRGYFKNGFLDNAM-CLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDV 83
N ++ Y G L +A L + ++ T+N ++ G + + A E+F M RDV
Sbjct: 63 NTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDV 122
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN---LVIGALVNC----------QRM 130
+WN+++SGY + +L F M + SW + A+ +C Q +
Sbjct: 123 ASWNTLMSGYFQSRQYLVSLETFLSMH-RSGDSWPNAFTLACAMKSCGALGWHSLALQLL 181
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
+ + F +VA+ +V+ VR G + A +LF ++ + N M+AGY+
Sbjct: 182 AMVQK-FDSQDDSEVAA--ALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTY 238
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIIS 246
V A +LF M +RD+ SW +++ L S R+ A+ M + T+ S ++
Sbjct: 239 GVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLT 298
Query: 247 VLIRNGLV---KEAHS-YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
R + K+ H+ + P+ + + ++ Y + G A VF + R+
Sbjct: 299 ACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVA 358
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
W V+I G + E ++ F QM+ + D ++++ C L LGRQ+H+ +
Sbjct: 359 WTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCL 418
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
K + Q VSN++I+MYA+C N+QSA F + DI+SW S+I + G KA E
Sbjct: 419 KSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKARE 478
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
F+ M + + IT+ +L A G + G + M ++ +++P Y +
Sbjct: 479 FFDGMS----EKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFK-- 532
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
G D N L D I I +KVG I ++
Sbjct: 533 ---GCADLGANKL----GDQI---------------IGRTVKVGLII----------DTS 560
Query: 543 VYLILTEMYLSCGRREDAKRIF 564
V + MY CGR +A+++F
Sbjct: 561 VANAVITMYSKCGRILEARKVF 582
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 206/691 (29%), Positives = 342/691 (49%), Gaps = 83/691 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N I A+ LFD MP RD +WN M+ GY + + +A LF +MPER++ ++ +I+
Sbjct: 138 VQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMIS 197
Query: 61 GLMQSDNVQGAKEVFDGMEV---------------------------------------R 81
G + +N A ++F M R
Sbjct: 198 GYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFER 257
Query: 82 DVVTWNSMISGYVCN-GLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
DVV ++++ Y + ++D A++ F M ++ +W+ +I AL + R+D A + ++
Sbjct: 258 DVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERD 317
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
+ +A T ++ GL + GRI +AR LF+++P V +WN +I GY+ NG V A++LF
Sbjct: 318 PVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFD 377
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET---------------CE-----KT 240
KM R+ SW +I G + R + A+ +++ + C +T
Sbjct: 378 KMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALET 437
Query: 241 WNSIISVLIRNGL-------------------VKEAHSYLEKYPYSNIASWTNVIVGYFE 281
+ S+ ++ G ++ A + +I SW + + +
Sbjct: 438 GTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQ 497
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
+ A F+ M +RD W +I + E + F M P++ T +
Sbjct: 498 NDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTIL 557
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L +C L +G+QIH AIK+ + V+NA+I+MY +CG S + F + DI
Sbjct: 558 LGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADSRRI-FDLMEERDI 616
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
+WN+II G A HG +A+++++ M P+++TFVG+L+ACS+AGLVD+G +F
Sbjct: 617 FTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKS 676
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
M Y L P HY C+VDLLGR G + A + ++ IE +W ALLGAC+IH
Sbjct: 677 MSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDM---PIEPDTVIWSALLGACKIHK 733
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
N ++G+ A E++ +EP+N+G Y++L+ +Y S G + + MK+ GV KEPGCSW
Sbjct: 734 NAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWT 793
Query: 582 QINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
QI D H F++GD H + + L L+T
Sbjct: 794 QIKDKMHSFVTGDKQHEQIEEIVATLEELYT 824
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 175/611 (28%), Positives = 282/611 (46%), Gaps = 80/611 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R+ EA+ +FD MP+RD + WN MI Y NG D A L++ + +M T +++G
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSG 105
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ V A+ VFDGM R+ V WN+MIS YV NG I A R+F MP +DV SWN ++
Sbjct: 106 YGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSML 165
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNG----------------LVREGRIVEAR 165
+ +M A + F++M R++ SWT+M++G + REG + +
Sbjct: 166 TGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQS 225
Query: 166 KLFDKMPA-----------------------KDVQAWNLMIAGY-LDNGCVGVAEDLFQK 201
+ A +DV ++ Y D + A F+
Sbjct: 226 NFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFES 285
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M +R+ +W +I L + RIDAAI+ +++ P ++I+ L + G + +A
Sbjct: 286 MIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILF 345
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
E+ P + SW +I GY + G V A ++F+ M R+ W MI G +N EE L
Sbjct: 346 EQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALG 405
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
++ SG P ++ TS+ CS++ L+ G Q+H+ A+K+ + NA+ITMY
Sbjct: 406 LLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYG 465
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+C N++ A FS + DI+SWNS + L + ++A F+ M DD+++
Sbjct: 466 KCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTT 521
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
++SA ++A ++ F M ++ L P S T ++ + G
Sbjct: 522 IISAYAHAEQSNEAMGAFKTMFCEHEL-PNSPILTILLGVCGS----------------- 563
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
LGA +I I I EL N+ L MY CG D++
Sbjct: 564 ------------LGASKIGQQIHTVAIKLGMDSELIVANA-----LISMYFKCG-CADSR 605
Query: 562 RIFAQMKENGV 572
RIF M+E +
Sbjct: 606 RIFDLMEERDI 616
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 212/460 (46%), Gaps = 42/460 (9%)
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
G +V+ + + L R GR+ EAR++FD MP +D+ AWN MI+ Y NG A DL+
Sbjct: 30 GELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYD 89
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
+ ++ + L++G R+ A F M E WN++IS ++NG + A
Sbjct: 90 AISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRL 149
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+ P +++SW +++ GY ++ A +FE M R++ W VMI G G + +
Sbjct: 150 FDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAW 209
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F +M G PD + F S L+ L LD+ + A+K + + A++ +Y
Sbjct: 210 DIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVY 269
Query: 381 ARCGNI-QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER------------- 426
+R ++ +A+ F S+ + +W+++I L++ G + A+ ++ER
Sbjct: 270 SRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALI 329
Query: 427 ------MRLTDFK--------PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
R+ D + P +++ +++ G+V++ + FD M + +
Sbjct: 330 TGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR-----NT 384
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
+ ++ + G +EA+ LL E+ G+ S + ++ AC +NI E G +
Sbjct: 385 ISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFAC---SNIVALE-TGTQ 440
Query: 533 VMELEPN-----NSGVYLILTEMYLSCGRREDAKRIFAQM 567
V L NS L MY C E A+++F++M
Sbjct: 441 VHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRM 480
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 202/622 (32%), Positives = 345/622 (55%), Gaps = 32/622 (5%)
Query: 18 QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
Q D+ ++ + + G +D A LF ++ E MF N+++AG +++ V A E+FD
Sbjct: 170 QDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDS 229
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMD----- 131
M RDVV+WN M+S +G + EAL + M K V + +L C R+
Sbjct: 230 MPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWG 289
Query: 132 --LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
L + + D + +V + G EA+ +F+ + ++ AW ++I+G+L
Sbjct: 290 KQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQY 349
Query: 190 GCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMPETCEKTW---- 241
GC + +LF +M +T + LI+G + R+D + +Q+ C K+
Sbjct: 350 GCFTESVELFNQMRAELMTLDQFALATLISGCCS--RMDLCLG--RQLHSLCLKSGQIQA 405
Query: 242 ----NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
NS+IS+ + ++ A + +I SWT++I Y ++G V A + F+ M+
Sbjct: 406 VVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSE 465
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFF-VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
++V WN M+ ++ E+GL+ + V + E PD T+ ++ C+DL LG Q
Sbjct: 466 KNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQ 525
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
I + +K+ T+V+NA+ITMY++CG I A F + + DI+SWN++I G + HG
Sbjct: 526 IIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGM 585
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
++A+E+F+ + KPD I++V VLS CS++GLV +G++YFD MK + + P H++
Sbjct: 586 GKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFS 645
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGERVM 534
C+VDLLGR G + EA +L+ D + + PT VWGALL AC+IH N ++ E+A + V
Sbjct: 646 CMVDLLGRAGHLTEAKDLI-----DDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVF 700
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
EL+ +SG Y+++ ++Y G+ +D+ +I M++ G+KK PG SW+++++ HVF + D
Sbjct: 701 ELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADD 760
Query: 595 SSHPKFHRLRYLLNLLHTEIER 616
SHP+ +R L+ L +I R
Sbjct: 761 VSHPQVLAIRKKLDELMEKIAR 782
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 245/562 (43%), Gaps = 64/562 (11%)
Query: 25 NVMIRGYFKNGFLDNAM-CLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDV 83
N ++ Y G L +A L + ++ T+N ++ G + + A E+F M RDV
Sbjct: 43 NTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDV 102
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN---LVIGALVNC----------QRM 130
+WN+++SGY + +L F M + SW + A+ +C Q +
Sbjct: 103 ASWNTLMSGYFQSRQYLVSLETFLSMH-RSGDSWPNAFTLACAMKSCGALGWHSLALQLL 161
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
+ + F +VA+ +V+ VR G + A +LF ++ + N M+AGY+
Sbjct: 162 AMVQK-FDSQDDSEVAA--ALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTY 218
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIIS 246
V A +LF M +RD+ SW +++ L S R+ A+ M + T+ S ++
Sbjct: 219 GVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLT 278
Query: 247 VLIRNGLV---KEAHS-YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
R + K+ H+ + P+ + + ++ Y + G A VF + R+
Sbjct: 279 ACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVA 338
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
W V+I G + E ++ F QM+ + D ++++ C L LGRQ+H+ +
Sbjct: 339 WTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCL 398
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
K + Q VSN++I+MYA+C N+QSA F + DI+SW S+I + G KA E
Sbjct: 399 KSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKARE 458
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
F+ M + + IT+ +L A G + G + M ++ +++P Y +
Sbjct: 459 FFDGMS----EKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFK-- 512
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
G D N L D I I +KVG I ++
Sbjct: 513 ---GCADLGANKL----GDQI---------------IGRTVKVGLII----------DTS 540
Query: 543 VYLILTEMYLSCGRREDAKRIF 564
V + MY CGR +A+++F
Sbjct: 541 VANAVITMYSKCGRILEARKVF 562
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 211/647 (32%), Positives = 323/647 (49%), Gaps = 35/647 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDMFTYNTVI 59
+++++ A+ LFD++PQ D V +I Y G L + +F+ P RD YN +I
Sbjct: 60 KSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMI 119
Query: 60 AGLMQSDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+ + A E+F M+ D T+ S++ ++ + H +K
Sbjct: 120 TAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGT 179
Query: 116 SW-----NLVIGALVNCQR---------MDLAESYFKEMGARDVASWTIMVNGLVREGRI 161
+ N +I + V C M A F EM RD SWT ++ G V+ +
Sbjct: 180 GFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDL 239
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGL 217
A++ + K AWN MI+GY G A ++F+KM D ++ +I+
Sbjct: 240 DAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVC 299
Query: 218 VNS---RRIDAAISYFKQM-----PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
N+ R +YF + P+ N++I+ + G V A K P ++
Sbjct: 300 ANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDL 359
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
SW ++ GY + + A F M +++ W +MI GL + EE LKFF +MK
Sbjct: 360 VSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQ 419
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G P + F + CS L +L GRQ+HAQ ++ + NA+ITMYARCG + +A
Sbjct: 420 GFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAA 479
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F ++P D ISWN++I L HG +A+ELFE M PD I+F+ V+SACS+A
Sbjct: 480 HCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHA 539
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
GLV +GR YFD M N Y + P HY ++DLL R G EA ++ + E +
Sbjct: 540 GLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESM---PFEPGAPI 596
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
W ALL CRIH NI +G A ER+ EL+P + G Y++L+ MY G+ D ++ M++
Sbjct: 597 WEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRD 656
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
GVKKEPGCSWI++ + H FL GD++HP+ ++ L L E+ +
Sbjct: 657 RGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRK 703
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 206/691 (29%), Positives = 342/691 (49%), Gaps = 83/691 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N I A+ LFD MP RD +WN M+ GY + + +A LF +MPER++ ++ +I+
Sbjct: 138 VQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMIS 197
Query: 61 GLMQSDNVQGAKEVFDGMEV---------------------------------------R 81
G + +N A ++F M R
Sbjct: 198 GYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFER 257
Query: 82 DVVTWNSMISGYVCN-GLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
DVV ++++ Y + ++D A++ F M ++ +W+ +I AL + R+D A + ++
Sbjct: 258 DVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERD 317
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
+ +A T ++ GL + GRI +AR LF+++P V +WN +I GY+ NG V A++LF
Sbjct: 318 PVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFD 377
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET---------------CE-----KT 240
KM R+ SW +I G + R + A+ +++ + C +T
Sbjct: 378 KMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALET 437
Query: 241 WNSIISVLIRNGL-------------------VKEAHSYLEKYPYSNIASWTNVIVGYFE 281
+ S+ ++ G ++ A + +I SW + + +
Sbjct: 438 GTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQ 497
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
+ A F+ M +RD W +I + E + F M P++ T +
Sbjct: 498 NDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTIL 557
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L +C L +G+QIH AIK+ + V+NA+I+MY +CG S + F + DI
Sbjct: 558 LGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADSRRI-FDLMEERDI 616
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
+WN+II G A HG +A+++++ M P+++TFVG+L+ACS+AGLVD+G +F
Sbjct: 617 FTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKS 676
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
M Y L P HY C+VDLLGR G + A + ++ IE +W ALLGAC+IH
Sbjct: 677 MSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDM---PIEPDTVIWSALLGACKIHK 733
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
N ++G+ A E++ +EP+N+G Y++L+ +Y S G + + MK+ GV KEPGCSW
Sbjct: 734 NAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWT 793
Query: 582 QINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
QI D H F++GD H + + L L+T
Sbjct: 794 QIKDKMHSFVTGDKQHEQIEEIVATLEELYT 824
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 175/611 (28%), Positives = 282/611 (46%), Gaps = 80/611 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R+ EA+ +FD MP+RD + WN MI Y NG D A L++ + +M T +++G
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSG 105
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ V A+ VFDGM R+ V WN+MIS YV NG I A R+F MP +DV SWN ++
Sbjct: 106 YGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSML 165
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNG----------------LVREGRIVEAR 165
+ +M A + F++M R++ SWT+M++G + REG + +
Sbjct: 166 TGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQS 225
Query: 166 KLFDKMPA-----------------------KDVQAWNLMIAGY-LDNGCVGVAEDLFQK 201
+ A +DV ++ Y D + A F+
Sbjct: 226 NFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFES 285
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M +R+ +W +I L + RIDAAI+ +++ P ++I+ L + G + +A
Sbjct: 286 MIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILF 345
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
E+ P + SW +I GY + G V A ++F+ M R+ W MI G +N EE L
Sbjct: 346 EQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALG 405
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
++ SG P ++ TS+ CS++ L+ G Q+H+ A+K+ + NA+ITMY
Sbjct: 406 LLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYG 465
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+C N++ A FS + DI+SWNS + L + ++A F+ M DD+++
Sbjct: 466 KCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTT 521
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
++SA ++A ++ F M ++ L P S T ++ + G
Sbjct: 522 IISAYAHAEQSNEAMGAFKTMFCEHEL-PNSPILTILLGVCGS----------------- 563
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
LGA +I I I EL N+ L MY CG D++
Sbjct: 564 ------------LGASKIGQQIHTVAIKLGMDSELIVANA-----LISMYFKCG-CADSR 605
Query: 562 RIFAQMKENGV 572
RIF M+E +
Sbjct: 606 RIFDLMEERDI 616
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 212/460 (46%), Gaps = 42/460 (9%)
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
G +V+ + + L R GR+ EAR++FD MP +D+ AWN MI+ Y NG A DL+
Sbjct: 30 GELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYD 89
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
+ ++ + L++G R+ A F M E WN++IS ++NG + A
Sbjct: 90 AISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRL 149
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+ P +++SW +++ GY ++ A +FE M R++ W VMI G G + +
Sbjct: 150 FDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAW 209
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F +M G PD + F S L+ L LD+ + A+K + + A++ +Y
Sbjct: 210 DIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVY 269
Query: 381 ARCGNI-QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER------------- 426
+R ++ +A+ F S+ + +W+++I L++ G + A+ ++ER
Sbjct: 270 SRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALI 329
Query: 427 ------MRLTDFK--------PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
R+ D + P +++ +++ G+V++ + FD M + +
Sbjct: 330 TGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR-----NT 384
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
+ ++ + G +EA+ LL E+ G+ S + ++ AC +NI E G +
Sbjct: 385 ISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFAC---SNIVALE-TGTQ 440
Query: 533 VMELEPN-----NSGVYLILTEMYLSCGRREDAKRIFAQM 567
V L NS L MY C E A+++F++M
Sbjct: 441 VHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRM 480
>gi|302753930|ref|XP_002960389.1| hypothetical protein SELMODRAFT_73601 [Selaginella moellendorffii]
gi|300171328|gb|EFJ37928.1| hypothetical protein SELMODRAFT_73601 [Selaginella moellendorffii]
Length = 577
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 182/572 (31%), Positives = 303/572 (52%), Gaps = 9/572 (1%)
Query: 3 NARIQEAQNLFDKMPQ-RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
N R +A+NLFD++P RD+V W+ +I + K G L++A +F+ +P + T ++
Sbjct: 8 NGRPWDAKNLFDRIPGGRDSVAWSCLIGAFVKIGDLEHARRVFDLLPRWTVVTSTAILVA 67
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
L + + A+ +F M RD+V WN+MI+ Y NG + A +F MP ++ VSWN +I
Sbjct: 68 LAKRGKAENARAMFLAMPERDLVAWNAMITAYAQNGNLQVAQAMFFRMPARNFVSWNAII 127
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
Q LA+ F M R+V SWT MV + GR+ EA+ L KMPA ++ +WN+
Sbjct: 128 DGCAQGQDEALAKKVFDSMPQREVVSWTAMVATYSQSGRLEEAQALLSKMPALNIVSWNV 187
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
MI + DN V A++ F + + D SW +I + +I A + F +MP+ +W
Sbjct: 188 MIQAFADNLLVEEAKERFDRAPEHDFVSWNAIITAYAQTSQIFLARAAFDRMPQRDVVSW 247
Query: 242 NSIISVLIRNGL--VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE---LMT 296
++I + G + +A ++ P N+ SW +I GY G + + +FE +M
Sbjct: 248 ATMIQSYAQEGQPSMDQAKEIFDRAPQRNVVSWNVMITGYSASGRIKQSRGLFERMPMMA 307
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
D+ WN +I G +N L E L+ F++M G SPD A++TS L C+ L +L R
Sbjct: 308 EHDLVSWNALIAGHLDNGLDERALQLFLEMDRRGCSPDPASYTSALAACAGLASLGAARD 367
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
IH + K V NA++ Y + G + A L F S+ D+++WN++ GL+ G
Sbjct: 368 IHWRLCKAGLETDAFVHNALVDFYGKSGRMADAELVFQSLASVDVVTWNALAAGLSRQGS 427
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
++L ++ +PD ITF+ +L+A +AGLVD GR F M Y ++P HY
Sbjct: 428 YRLVVDLLWAIKDQGLEPDGITFLALLAAYGHAGLVDHGRRAFAAMVETYRIEPGIEHYH 487
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
C+VD+LGR ++EA+ +++ + S W +L AC N+ V +A E ++ +
Sbjct: 488 CLVDMLGRANRLEEAVAVVSAMPH---RPSSVTWTTVLSACVKWKNLGVASVAFESLLGI 544
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+P+ Y+++ +Y S G E+ ++ ++
Sbjct: 545 DPDGPAAYVLMANVYGSAGMAEEEAKLLEHVR 576
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/544 (25%), Positives = 236/544 (43%), Gaps = 83/544 (15%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ + + A+ +F MP+RD V WN MI Y +NG L A +F +MP R+ ++N +I G
Sbjct: 70 KRGKAENARAMFLAMPERDLVAWNAMITAYAQNGNLQVAQAMFFRMPARNFVSWNAIIDG 129
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
Q + AK+VFD M R+VV+W +M++ Y +G ++EA + MP ++VSWN++I
Sbjct: 130 CAQGQDEALAKKVFDSMPQREVVSWTAMVATYSQSGRLEEAQALLSKMPALNIVSWNVMI 189
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
A + ++ A+ F D SW ++ + +I AR FD+MP +DV +W
Sbjct: 190 QAFADNLLVEEAKERFDRAPEHDFVSWNAIITAYAQTSQIFLARAAFDRMPQRDVVSWAT 249
Query: 182 MIAGYLDNG--CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
MI Y G + A+++F + R++ SW +I G S RI + F++MP E
Sbjct: 250 MIQSYAQEGQPSMDQAKEIFDRAPQRNVVSWNVMITGYSASGRIKQSRGLFERMPMMAEH 309
Query: 240 ---TWNSIISVLIRNGLVKEA-HSYLE---KYPYSNIASWTNVIVG-------------- 278
+WN++I+ + NGL + A +LE + + AS+T+ +
Sbjct: 310 DLVSWNALIAGHLDNGLDERALQLFLEMDRRGCSPDPASYTSALAACAGLASLGAARDIH 369
Query: 279 ---------------------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
Y + G + A VF+ + + DV WN + GL
Sbjct: 370 WRLCKAGLETDAFVHNALVDFYGKSGRMADAELVFQSLASVDVVTWNALAAGLSRQGSYR 429
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAM 376
+ +K+ G PD TF ++L +D GR+ A ++ R + + +
Sbjct: 430 LVVDLLWAIKDQGLEPDGITFLALLAAYGHAGLVDHGRRAFAAMVETYRIEPGIEHYHCL 489
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+ M R ++ A+ S++P +P
Sbjct: 490 VDMLGRANRLEEAVAVVSAMP----------------------------------HRPSS 515
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR-SAHYTCVVDLLGRFGLIDEAMNLL 495
+T+ VLSAC + F+ + + P A Y + ++ G G+ +E LL
Sbjct: 516 VTWTTVLSACVKWKNLGVASVAFESLLG---IDPDGPAAYVLMANVYGSAGMAEEEAKLL 572
Query: 496 NEIR 499
+R
Sbjct: 573 EHVR 576
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 202/497 (40%), Gaps = 85/497 (17%)
Query: 151 MVNGLVREGRIVEARKLFDKMP-AKDVQAWNLMIAGYLDNGCV----------------- 192
M+ GR +A+ LFD++P +D AW+ +I ++ G +
Sbjct: 1 MLTVYAHNGRPWDAKNLFDRIPGGRDSVAWSCLIGAFVKIGDLEHARRVFDLLPRWTVVT 60
Query: 193 -----------GVAED---LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
G AE+ +F M +RDL +W +I + + A + F +MP
Sbjct: 61 STAILVALAKRGKAENARAMFLAMPERDLVAWNAMITAYAQNGNLQVAQAMFFRMPARNF 120
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
+WN+II + A + P + SWT ++ Y + G + A + M
Sbjct: 121 VSWNAIIDGCAQGQDEALAKKVFDSMPQREVVSWTAMVATYSQSGRLEEAQALLSKMPAL 180
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR--- 355
++ WNVMI +N L EE + F + P D ++ +++T + + L R
Sbjct: 181 NIVSWNVMIQAFADNLLVEEAKERF----DRAPEHDFVSWNAIITAYAQTSQIFLARAAF 236
Query: 356 ---------------QIHAQAIKIARNQFTTVS-----------NAMITMYARCGNIQSA 389
Q +AQ + + +Q + N MIT Y+ G I+ +
Sbjct: 237 DRMPQRDVVSWATMIQSYAQEGQPSMDQAKEIFDRAPQRNVVSWNVMITGYSASGRIKQS 296
Query: 390 LLEFSSVPI---HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
F +P+ HD++SWN++I G +G E+AL+LF M PD ++ L+AC
Sbjct: 297 RGLFERMPMMAEHDLVSWNALIAGHLDNGLDERALQLFLEMDRRGCSPDPASYTSALAAC 356
Query: 447 SYAGLVDQGR----YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
AGL G ++ C K L+ + + +VD G+ G + +A + + +
Sbjct: 357 --AGLASLGAARDIHWRLC---KAGLETDAFVHNALVDFYGKSGRMADAELVFQSLAS-- 409
Query: 503 IEVSPTVWGALLGACRIHNNIK--VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
V W AL + + V + + LEP+ +L L Y G +
Sbjct: 410 --VDVVTWNALAAGLSRQGSYRLVVDLLWAIKDQGLEPDGI-TFLALLAAYGHAGLVDHG 466
Query: 561 KRIFAQMKENGVKKEPG 577
+R FA M E + EPG
Sbjct: 467 RRAFAAMVET-YRIEPG 482
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 219/731 (29%), Positives = 359/731 (49%), Gaps = 126/731 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ + ++ A +FD MPQRDTV+WN M+ GY G + A LF+ MPERD+ ++N++I+
Sbjct: 88 IKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLIS 147
Query: 61 GLMQSDNVQGAKEVF----------------------------------DGMEVR----- 81
G + + + + +VF G+ V+
Sbjct: 148 GYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDC 207
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
DVVT ++++ Y +D +++ FH MP K+ VSW+ +I V + FKEM
Sbjct: 208 DVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQ 267
Query: 142 ---------------------------------------ARDVASWTIMVNGLVREGRIV 162
DV T ++ ++ +
Sbjct: 268 KAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLS 327
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYL--DNG--------------CVGVAEDLFQ-KMHDR 205
+A+KLF+ +P ++Q++N +I GY D G C + DL ++H
Sbjct: 328 DAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGL 387
Query: 206 DLTSWKQ----LINGLVN----SRRIDAAISYFKQMPETCEKTWNSII------------ 245
+ S Q + N +++ + A F++M +WN+II
Sbjct: 388 SMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKT 447
Query: 246 -SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
S+ I N ++K S L + IA +I Y + G + A K+ + + + V WN
Sbjct: 448 LSLFIHNRIIK---SRLGLDSFVGIA----LIDMYSKCGMMEKAEKLHDRLAEQTVVSWN 500
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
+I G EE K F +M E G PDN T+ ++L C++L T++LG+QIHAQ IK
Sbjct: 501 AIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK 560
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+S+ ++ MY++CGN+Q L F P D ++WN+++CG A HG E+AL++F
Sbjct: 561 ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIF 620
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
E M+L + KP+ TF+ VL AC + GLV++G +YF M + Y L P+ HY+CVVD++GR
Sbjct: 621 EYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGR 680
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G + +A+ L I E +W LL C+IH N++V E A +++LEP +S Y
Sbjct: 681 SGQVSKALEL---IEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAY 737
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
++L+ +Y + G + ++ M+ NG+KKEPGCSWI+I H FL GD +HP+ +
Sbjct: 738 VLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIY 797
Query: 605 YLLNLLHTEIE 615
L++L E++
Sbjct: 798 ENLDVLTDEMK 808
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 130/544 (23%), Positives = 237/544 (43%), Gaps = 58/544 (10%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+F N +I ++ +++ A +VFDGM RD V+WN+M+ GY G I A ++F MP
Sbjct: 77 VFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPE 136
Query: 112 KDVVSWN-LVIGALVNCQRMDLAESYFK--EMGAR-DVASWTIMV---NGLVREGRIVEA 164
+DVVSWN L+ G L N + + + + MG D ++ +++ + L G ++
Sbjct: 137 RDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQI 196
Query: 165 RKLFDKMPAK-DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
L KM DV + ++ Y + + F M +++ SW +I G V + +
Sbjct: 197 HGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDL 256
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNG-------LVKEAHSYLEKYPYSNIASWTNVI 276
+ FK+M + S + + R+ L + H + K + T+V+
Sbjct: 257 RGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFG-----TDVV 311
Query: 277 VG------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
+G Y + + A K+F + ++ +N +I G +D G
Sbjct: 312 IGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD--------------KG 357
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
D + + C+ + G Q+H ++K V+NA++ MY +CG + A
Sbjct: 358 LGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEAC 417
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
L F + D +SWN+II +G EK L LF R+ + +FVG+
Sbjct: 418 LVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGI-------A 470
Query: 451 LVDQGRYYFDC--MKNKYFLQPRSAHYTCVV--DLLGRFGL---IDEAMNLLNEIRADGI 503
L+D Y C M+ L R A T V ++ F L +EA +++ G+
Sbjct: 471 LIDM---YSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGV 527
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGRREDAKR 562
+ + +L C +++G+ ++++ E +++ + L +MY CG +D +
Sbjct: 528 DPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQL 587
Query: 563 IFAQ 566
IF +
Sbjct: 588 IFEK 591
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/535 (22%), Positives = 215/535 (40%), Gaps = 108/535 (20%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N +I+ Y K L+ A +F+ MP+RD ++N ++ G ++ A+++FD M RDVV
Sbjct: 81 NCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVV 140
Query: 85 TWNSMISGYVCNGLIDEALRVF----------------------------------HGMP 110
+WNS+ISGY+ NG + + VF HG+
Sbjct: 141 SWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLA 200
Query: 111 LK-----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
+K DVV+ + ++ C+++D + +F M ++ SW+ ++ G V+ +
Sbjct: 201 VKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGL 260
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGV-AEDLFQKMHDR--------DLTSWKQLING 216
+LF +M V A C G+ A L ++H D+ ++
Sbjct: 261 ELFKEMQKAGVGVSQSTFASVF-RSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDM 319
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN------------------GLVK--- 255
+ + A F +P +++N+II R+ ++K
Sbjct: 320 YMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDL 379
Query: 256 ---EAHSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
+ H ++ SNI ++ Y + G + A VFE M +RD WN +I
Sbjct: 380 EGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHE 439
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+N E+ L F IH + IK +
Sbjct: 440 QNGNEEKTLSLF---------------------------------IHNRIIKSRLGLDSF 466
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
V A+I MY++CG ++ A + ++SWN+II G + +E+A + F +M
Sbjct: 467 VGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMG 526
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
PD+ T+ +L C+ V+ G+ + K LQ + + +VD+ + G
Sbjct: 527 VDPDNFTYATILDTCANLVTVELGKQIHAQIIKKE-LQSDAYISSTLVDMYSKCG 580
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 150/345 (43%), Gaps = 21/345 (6%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N +I + I+ ++ A + P + SW ++ GY G++G A K+F+ M RDV
Sbjct: 81 NCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVV 140
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN +I G N + + F+QM G D TF VL CS L G QIH A
Sbjct: 141 SWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLA 200
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
+K+ + +A++ MYA+C + ++ F S+P + +SW++II G + L
Sbjct: 201 VKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGL 260
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNKYFLQPRSAHYTCVVD 480
ELF+ M+ TF V +C+ + G + + +K + T +D
Sbjct: 261 ELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIG--TATLD 318
Query: 481 LLGRFGLIDEAMNLLNEI----------------RAD-GIEVSPTVWGALLGACR-IHNN 522
+ + + +A L N + R+D G+ + AC I +
Sbjct: 319 MYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGD 378
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
++ ++ G + L +N V + +MY CG +A +F +M
Sbjct: 379 LEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM 423
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 115/306 (37%), Gaps = 76/306 (24%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
TF+ + CSD L G+Q HA+ I V+N +I MY +C +++ A F +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 397 PIHDIISWN-------------------------------SIICGLAYHGYAEKALELFE 425
P D +SWN S+I G ++G K +++F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQG----------RYYFDC-------------- 461
+M D TF VL +CS L D G + FDC
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCS--SLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAK 221
Query: 462 -------------MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
M K ++ + CV + R GL L E++ G+ VS +
Sbjct: 222 CKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGL-----ELFKEMQKAGVGVSQS 276
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT-EMYLSCGRREDAKRIFAQM 567
+ ++ +C + +++G ++ + V T +MY+ C DA+++F +
Sbjct: 277 TFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSL 336
Query: 568 KENGVK 573
+ ++
Sbjct: 337 PNHNLQ 342
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 211/703 (30%), Positives = 356/703 (50%), Gaps = 99/703 (14%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVIA 60
+ +A+ LF +MP+RD +WN ++ GY+++G +AM F M + FT+ +
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMK 170
Query: 61 ---------------GLMQSDNVQG--------------------AKEVFDGMEVRDVVT 85
GL+ QG A + F +E V
Sbjct: 171 SCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFC 230
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV 145
NSM++GY + +D AL +F MP +DVVSWN+++ AL R A S +M R V
Sbjct: 231 RNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGV 290
Query: 146 A-------------------SW--------------------TIMVNGLVREGRIVEARK 166
W + MV + G EAR+
Sbjct: 291 RLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARR 350
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRR 222
+F + ++ +W ++I G+L GC + +LF +M +T + +I+G N R
Sbjct: 351 VFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSN--R 408
Query: 223 IDAAISYFKQMPETCEKTW--------NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTN 274
+D ++ +Q+ K+ NS+IS+ + G ++ A S +I SWT
Sbjct: 409 MDMCLA--RQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTG 466
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSP 333
++ Y ++G +G A + F+ M+TR+V WN M+ ++ E+GLK + M E P
Sbjct: 467 MLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIP 526
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D T+ ++ C+D+ LG QI +K+ T+V NA+ITMY++CG I A F
Sbjct: 527 DWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIF 586
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ D++SWN++I G + HG ++A+E+F+ M KPD I++V VLS+CS++GLV
Sbjct: 587 DFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQ 646
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+G++YFD +K + + P H++C+VDLL R G + EA NL++E+ ++ + VWGAL
Sbjct: 647 EGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMP---MKPTAEVWGAL 703
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
L AC+ H N ++ E+A + + +L+ +SG Y++L ++Y G+ D+ ++ M++ G+K
Sbjct: 704 LSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIK 763
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
K PG SW+++ + HVF + D SHP+ +R L+ L +I +
Sbjct: 764 KNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQ 806
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 149/561 (26%), Positives = 251/561 (44%), Gaps = 62/561 (11%)
Query: 25 NVMIRGYFKNGFLDNAMCLF-NQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDV 83
N ++ Y G L +A L + E ++ T+N ++ G + ++ A+E+F M RDV
Sbjct: 67 NTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDV 126
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGM-----PLKDVVSWNLVI---GAL----VNCQRMD 131
+WN+++SGY +G +A+ F M L + ++ + GAL V Q +
Sbjct: 127 TSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLG 186
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
L + F G DVA T +V+ VR G + A K F ++ V N M+AGY +
Sbjct: 187 LL-TKFGFQGDPDVA--TGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYG 243
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISV 247
V A +LF+ M +RD+ SW +++ L S R A+S M + T+ S ++
Sbjct: 244 VDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTA 303
Query: 248 ---LIRNGLVKEAHS-YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
L G K+ H+ + P + + ++ Y + G A +VF + R+ W
Sbjct: 304 CAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSW 363
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
V+I G + E L+ F QM+ + D ++++ CS+ + L RQ+H+ ++K
Sbjct: 364 TVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLK 423
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
+ +SN++I+MYA+CGN+Q+A FSS+ DI+SW ++ + G KA E
Sbjct: 424 SGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREF 483
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
F+ M + IT+ +L A G + G + M + + P Y +
Sbjct: 484 FDGMSTRNV----ITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFR--- 536
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGV 543
G D N L + + G + +KVG I VM
Sbjct: 537 --GCADMGANKLGD----------QITG---------HTVKVGLILDTSVMN-------- 567
Query: 544 YLILTEMYLSCGRREDAKRIF 564
+ MY CGR +A++IF
Sbjct: 568 --AVITMYSKCGRISEARKIF 586
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 211/701 (30%), Positives = 352/701 (50%), Gaps = 99/701 (14%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVIA 60
+ +A LF +MP RD +WN ++ GY+++G NA+ +F M + + FT+ V+
Sbjct: 108 LSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMK 167
Query: 61 ---------------GLMQSDNVQGAKEV--------------------FDGMEVRDVVT 85
GL+ + Q +V F ++ ++
Sbjct: 168 SCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIIC 227
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR-- 143
NSM+ GY + +D AL +F MP +DVVSWN+VI AL R+ A +M +
Sbjct: 228 RNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGV 287
Query: 144 --DVASWT-----------------------------------IMVNGLVREGRIVEARK 166
D ++T MV + G EA++
Sbjct: 288 RPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKR 347
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRR 222
+F + ++ +W ++I G+L GC + +LF +M D + LI+G N+
Sbjct: 348 VFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMD 407
Query: 223 IDAAISYFKQMPETCEKTW--------NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTN 274
I Q+ C K+ NS+IS+ + G ++ A +I SWT
Sbjct: 408 I----CLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTG 463
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSP 333
+I Y ++G + A + F+ M+TR+V WN M+ ++ E+GLK + M E P
Sbjct: 464 MITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIP 523
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D T+ ++ C+D+ LG QI +K+ T+V NA+ITMY++CG I A F
Sbjct: 524 DWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAF 583
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ D++SWN++I G + HG ++A+E+F+ + KPD I++V VLS CS++GLV+
Sbjct: 584 DFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVE 643
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+G++YFD MK + + P H++C+VDLLGR G + EA NL++E+ ++ + VWGAL
Sbjct: 644 EGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMP---MKPTAEVWGAL 700
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
L AC+ H N + E+A + + +L+ SG Y++L +MY G+ +D+ ++ M++ G+K
Sbjct: 701 LSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIK 760
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
K PG SW+++N+ HVF + D SHP+ +R L+ L +I
Sbjct: 761 KSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKI 801
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 169/397 (42%), Gaps = 68/397 (17%)
Query: 242 NSIISVLIRNGLVKEAHSYL-EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
N+++ + G + +A + L ++ N+ + ++ GY ++G + A+++F M TRDV
Sbjct: 64 NTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDV 123
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA-TFTSVLTICS------------- 346
WN ++ G ++ L FV M+++G S NA TF V+ C
Sbjct: 124 ASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLG 183
Query: 347 -----------DLPTLDLGRQIHAQAIKIARNQFTTVS-------NAMITMYARCGNIQS 388
D+ T + + A+ A QF+ + N+M+ YA+ +
Sbjct: 184 LLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDH 243
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
AL F S+P D++SWN +I L+ G +AL++ M +PD T+ L+AC+
Sbjct: 244 ALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACAR 303
Query: 449 AGLVDQGR-YYFDCMKNKYFLQP-----------------------------RSAHYTCV 478
++ G+ + ++N + P S +T +
Sbjct: 304 LSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVL 363
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
+ ++G E++ L N++RA+ + V L+ C +I +G + + L+
Sbjct: 364 IGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLG--SQLHSLCLKS 421
Query: 539 NNSGVYLI---LTEMYLSCGRREDAKRIFAQMKENGV 572
++ ++ L MY CG ++A+ IF M E +
Sbjct: 422 GHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDI 458
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF----NQMPERDMFTYNT 57
+ RI EA+ FD + ++D V+WN MI GY ++G A+ +F N+ + D +Y
Sbjct: 572 KCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVA 631
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVT-----WNSMISGYVCNGLIDEALRVFHGMPLK 112
V++G S V+ K FD M+ ++ ++ M+ G + EA + MP+K
Sbjct: 632 VLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMK 691
Query: 113 DVVS-WNLVIGALVNCQRMDLAESYFKEM 140
W ++ A DLAE K +
Sbjct: 692 PTAEVWGALLSACKTHGNNDLAELAAKHL 720
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 72/196 (36%), Gaps = 34/196 (17%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA--LLE-- 392
L C L R +H++ I + + N ++ Y CG + A LL
Sbjct: 27 ALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDE 86
Query: 393 ----------------------------FSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
F +P D+ SWN+I+ G G AL++F
Sbjct: 87 ITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIF 146
Query: 425 ERMRLT-DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
MR T D P+ TF V+ +C G + + +K+ Q T +VD+L
Sbjct: 147 VSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLL-SKFDSQDDPDVQTALVDMLV 205
Query: 484 RFGLIDEAMNLLNEIR 499
R G +D A + I+
Sbjct: 206 RCGAMDFASKQFSRIK 221
>gi|325260825|gb|ADZ04643.1| hypothetical protein [Oryza punctata]
Length = 674
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 194/621 (31%), Positives = 331/621 (53%), Gaps = 45/621 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R+++AQ LFD+MP RD ++W ++ Y G L +A +F+ MP R+ ++N +++
Sbjct: 50 RRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAPSWNALLSV 109
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWNL 119
+++ + A +F M ++ V++ ++ISG G++ EA V+ MP +D V N
Sbjct: 110 YLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAGMLREAELVYEEMPQQWRDPVGSNA 169
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++ + + +A F+ M RDV SW+ MV+GL + G + EAR++FD MP + V +W
Sbjct: 170 LMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERSVVSW 229
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDR-------------DLTSWKQL------INGLVNS 220
MI GY+ G LF M D + L I+ L+ S
Sbjct: 230 TSMIRGYVKRGMCSDGLLLFLNMRREGVQVNATTLSVVLDACAGASLAREGIQIHNLIIS 289
Query: 221 RRIDAAI----------SYFKQMPET-----CEK-----TWNSIISVLIRNGLVKEAHSY 260
+ I S F M + C + +WNS+I+ +++ +V+EAH
Sbjct: 290 MGFELDIFLGDSVIIMYSRFGWMADAQRAFNCMQQKDIVSWNSLITGYVQHDMVEEAHVL 349
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+ P + SWT+++VG+ G + ++++FE M +DV W +I N +
Sbjct: 350 FKLMPQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDVVAWTAIISSFITNGDYLSAV 409
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
++F +M + G P+ TF+ +L+ + L L+ GRQ HA +I + + V ++I+MY
Sbjct: 410 RWFCRMSQEGCKPNTITFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVHTSLISMY 469
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
A+CG + A FSS+ +I+ NS+I HG+AE AL+LF +M+ +KP+ +TF+
Sbjct: 470 AKCGRLAEAHHVFSSISNPSLIAINSMITAFVQHGFAEDALKLFTKMQNAGYKPNHVTFL 529
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
G+L+ C+ AG V QG YF+ M+ Y ++P HYTC+VDLLGR GL+ EA+ ++N +
Sbjct: 530 GILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQ 589
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
+ W ALL A +H+N+ +IA ++++E +P ++ Y +L++M+ S G +
Sbjct: 590 ND---HSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVLSKMFSSAGMEYEE 646
Query: 561 KRIFAQMKENGVKKEPGCSWI 581
+ Q+ N K PG S I
Sbjct: 647 MQKVVQL-SNMASKRPGYSLI 666
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 219/499 (43%), Gaps = 94/499 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + A +F+ M RD ++W+ M+ G K+G + A +F+ MPER + ++ ++I
Sbjct: 175 LRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERSVVSWTSMIR 234
Query: 61 GL---------------MQSDNVQ--------------GAKEVFDGMEVR---------- 81
G M+ + VQ GA +G+++
Sbjct: 235 GYVKRGMCSDGLLLFLNMRREGVQVNATTLSVVLDACAGASLAREGIQIHNLIISMGFEL 294
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
D+ +S+I Y G + +A R F+ M KD+VSWN +I V ++ A FK M
Sbjct: 295 DIFLGDSVIIMYSRFGWMADAQRAFNCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMP 354
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+D SWT MV G G + E+ +LF++MP KDV AW +I+ ++ NG
Sbjct: 355 QKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDVVAWTAIISSFITNG----------- 403
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEK---TWNSIISVLIRNGLV--- 254
D S A+ +F +M E C+ T++ ++S L ++
Sbjct: 404 ----DYLS----------------AVRWFCRMSQEGCKPNTITFSCLLSALASLAMLNQG 443
Query: 255 KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
++AH+Y + + A T++I Y + G + A VF ++ + N MI ++
Sbjct: 444 RQAHAYSINMGWVFDSAVHTSLISMYAKCGRLAEAHHVFSSISNPSLIAINSMITAFVQH 503
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG-------RQIHAQAIKIAR 366
E+ LK F +M+ +G P++ TF +LT C+ + G R ++ ++
Sbjct: 504 GFAEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVY--GVEPNP 561
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII-SWNSIICGLAYHGYAEKALELFE 425
+T M+ + R G + AL +S+P +D +W +++ + H + A
Sbjct: 562 EHYTC----MVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLH--SNLAFAKIA 615
Query: 426 RMRLTDFKPDDITFVGVLS 444
+L + P D T VLS
Sbjct: 616 AQKLLEKDPYDATAYTVLS 634
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 127/313 (40%), Gaps = 30/313 (9%)
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE-NDLGEEGLKFFVQM 326
N A ++ Y G + A +F+ M +RDV W ++ + DL L F
Sbjct: 37 NRAHLNALLTAYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMP 96
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGN 385
+ + PS NA + L L ++ A+ VS A+I+ A+ G
Sbjct: 97 RRNAPS-WNALLSVYLRAARPRAAHALFYKMPAK---------NAVSYGAIISGLAKAGM 146
Query: 386 IQSALLEFSSVPIH--DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
++ A L + +P D + N+++ G G AL +FE M + D I++ ++
Sbjct: 147 LREAELVYEEMPQQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDV----ISWSAMV 202
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
G V + R FD M + + +T ++ + G+ + + L +R +G+
Sbjct: 203 DGLCKHGSVSEARRVFDAMPERSVVS-----WTSMIRGYVKRGMCSDGLLLFLNMRREGV 257
Query: 504 EVSPTVWGALLGACR----IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRED 559
+V+ T +L AC I++ + EL+ +I MY G D
Sbjct: 258 QVNATTLSVVLDACAGASLAREGIQIHNLIISMGFELDIFLGDSVII---MYSRFGWMAD 314
Query: 560 AKRIFAQMKENGV 572
A+R F M++ +
Sbjct: 315 AQRAFNCMQQKDI 327
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 214/668 (32%), Positives = 353/668 (52%), Gaps = 87/668 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
M+ +++ + +FD+M ++ V+W ++ GY +NG + A+ LF+QM + + FT+
Sbjct: 138 MKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFA 197
Query: 57 TVIAGLM-----------------------------------QSDNVQGAKEVFDGMEVR 81
V+ GL +S V AK VFD ME R
Sbjct: 198 AVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENR 257
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESY- 136
+ V+WNSMI+G+V NGL EA +F+ M L+ V + VI N + M A+
Sbjct: 258 NAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLH 317
Query: 137 ---FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA-KDVQAWNLMIAGYLDNGCV 192
K D+ T ++ + I +A KLF M ++V +W +I+GY+ NG
Sbjct: 318 CQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRT 377
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A +LF +M RR ++F T+++I++ N
Sbjct: 378 DRAMNLFCQM------------------RREGVRPNHF---------TYSTILTA---NA 407
Query: 253 LV--KEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
V + H+ + K Y N S T + Y ++G+ A K+FEL+ +D+ W+ M+ G
Sbjct: 408 AVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSG 467
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT--LDLGRQIHAQAIKIARN 367
+ E +K F+Q+ + G P+ TF+SVL C+ PT ++ G+Q H+ +IK +
Sbjct: 468 YAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACA-APTASVEQGKQFHSCSIKSGFS 526
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
VS+A++TMYA+ GNI+SA F D++SWNS+I G A HG +K+L++FE M
Sbjct: 527 NALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEM 586
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
R + + D ITF+GV+SAC++AGLV++G+ YFD M Y + P HY+C+VDL R G+
Sbjct: 587 RSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGM 646
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLIL 547
+++AM+L+N++ T+W LL ACR+H N+++GE+A E+++ L+P +S Y++L
Sbjct: 647 LEKAMDLINKMP---FPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLL 703
Query: 548 TEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
+ +Y + G ++ ++ M VKKE G SWI++ + F++GD SHP+ R+ L
Sbjct: 704 SNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKL 763
Query: 608 NLLHTEIE 615
L ++
Sbjct: 764 EELSIRLK 771
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 124/556 (22%), Positives = 235/556 (42%), Gaps = 70/556 (12%)
Query: 43 LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGY--VCNGLID 100
LF++ P++ + N ++ ++D + A +F G+ T S +S VC L D
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107
Query: 101 EAL-RVFHGMPLK-----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNG 154
+ + H +K DV ++ + + ++ E F EM ++V SWT ++ G
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167
Query: 155 LVREGRIVEARKLFDKMP------------------------AKDVQAWNLMIAGYLDNG 190
+ G +A KLF +M K VQ ++I LD+
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227
Query: 191 C---------------VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
V A+ +F M +R+ SW +I G V + A F +M
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287
Query: 236 TCEKTWNSIISVLIR-------NGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGS 287
K +I + +I+ K+ H + K ++ T ++V Y + E+
Sbjct: 288 EGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDD 347
Query: 288 AIKVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A K+F +M ++V W +I G +N + + F QM+ G P++ T++++LT +
Sbjct: 348 AFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANA 407
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
+ QIHA +K +V A+ Y++ G+ A F + DI++W++
Sbjct: 408 AVSP----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSA 463
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY-AGLVDQGRYYFDCMKNK 465
++ G A G E A+++F ++ +P++ TF VL+AC+ V+QG+ + C
Sbjct: 464 MLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKS 523
Query: 466 YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH----N 521
F + +V + + G I+ A NE+ ++ W +++ H
Sbjct: 524 GFSNALCVS-SALVTMYAKRGNIESA----NEVFKRQVDRDLVSWNSMISGYAQHGCGKK 578
Query: 522 NIKVGEIAGERVMELE 537
++K+ E + +EL+
Sbjct: 579 SLKIFEEMRSKNLELD 594
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 148/336 (44%), Gaps = 51/336 (15%)
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
++F+ + ++ N ++F ND +E L F+ ++ SG D ++ + VL +C L
Sbjct: 47 QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
+G+Q+H Q IK + +V +++ MY + +++ F + + +++SW S++
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA 166
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-------------- 455
G +G E+AL+LF +M+L KP+ TF VL + G V++G
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226
Query: 456 ---------------------RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
+ FD M+N+ + + ++ GL EA L
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENR-----NAVSWNSMIAGFVTNGLDLEAFEL 281
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS----GVYLILTEM 550
+R +G++++ T++ ++ C NIK A + ++ N S + L
Sbjct: 282 FYRMRLEGVKLTQTIFATVIKLCA---NIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVA 338
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
Y C +DA ++F M +GV+ SW I G
Sbjct: 339 YSKCSEIDDAFKLFCMM--HGVQNV--VSWTAIISG 370
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 143/336 (42%), Gaps = 34/336 (10%)
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
+++ T+++ Y + V +VF+ M ++V W ++ G +N L E+ LK F QM+
Sbjct: 126 DVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQ 185
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
G P+ TF +VL + ++ G Q+H IK + V N+M+ MY++ +
Sbjct: 186 LEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVS 245
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
A F S+ + +SWNS+I G +G +A ELF RMRL K F V+ C+
Sbjct: 246 DAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCA 305
Query: 448 -----------YAGLVDQGR------------YYFDCMK----NKYFLQPRSAH----YT 476
+ ++ G Y C + K F +T
Sbjct: 306 NIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWT 365
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
++ + G D AMNL ++R +G+ + + +L A + + +I V
Sbjct: 366 AIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA---NAAVSPSQIHALVVKTN 422
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
N+ V L++ Y G +A +IF + E +
Sbjct: 423 YENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDI 458
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 202/609 (33%), Positives = 326/609 (53%), Gaps = 26/609 (4%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N +I Y K G+LD A +F++M ER++F++N++I+ LM+ V + +F M +D
Sbjct: 63 NRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQC 122
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA-LVNCQRMDLAESYFKEMGAR 143
+WNSMI+G+ + +EAL F M D V + G+ L C R+ + + G
Sbjct: 123 SWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLI 182
Query: 144 DVASWTI---MVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
+ +++ M +GL+ + G + AR++FD M K+V +WN +I Y NG A
Sbjct: 183 SKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEAL 242
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT---------WNSIISV 247
+ F +M + + + +V++ AA Q+ K+ N+++ +
Sbjct: 243 EAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDM 302
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
+ G V EA ++ P N S T ++ GY + V +A +F + +D+ WN +I
Sbjct: 303 YAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALI 362
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK---- 363
G +N EE L F +K P + TF ++L ++L L+LGRQ H+ +K
Sbjct: 363 AGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFR 422
Query: 364 --IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
V N++I MY +CG+++ L F ++ D +SWN++I G A +GY +AL
Sbjct: 423 FQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEAL 482
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
ELF++M + KPD +T +G L ACS+AGLV++GR YF M ++ L P HYTC+VDL
Sbjct: 483 ELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDL 542
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LGR G ++EA +L+ + + VW +LL AC++H NI +G+ E++ E++P +S
Sbjct: 543 LGRAGCLEEAKDLIESMPK---QPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSS 599
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFH 601
G Y++L MY GR DA + M+ GV K+PGCSWI I HVF+ D HP+
Sbjct: 600 GPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKK 659
Query: 602 RLRYLLNLL 610
+ +L LL
Sbjct: 660 EIYSILKLL 668
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 163/635 (25%), Positives = 269/635 (42%), Gaps = 143/635 (22%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ +FD+M +R+ ++N +I + GF+D + LF+ MPE+D ++N++IAG Q D
Sbjct: 78 ARKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRF 137
Query: 69 QGA-----------------------------KEVFDGMEVR----------DVVTWNSM 89
+ A K++ G ++ DV + +
Sbjct: 138 EEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGL 197
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG----------ALVNCQRM--------- 130
I Y GL+ A RVF GM K+VVSWN +I AL RM
Sbjct: 198 IDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDE 257
Query: 131 -DLAE--------SYFKE---MGARDVASWT-----IMVNGLV----REGRIVEARKLFD 169
LA + FKE + AR V S I+ N LV + GR+ EAR +FD
Sbjct: 258 VTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFD 317
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+MP ++ + M++GY + V A +F + +D+ SW LI G + + A+
Sbjct: 318 RMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGL 377
Query: 230 FKQMPE--TCEK--TWNSIISV---LIRNGLVKEAHSYLEKYPY-------SNIASWTNV 275
F+ + C T+ ++++ L L ++AHS++ K+ + +I ++
Sbjct: 378 FRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSL 437
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
I Y + G V ++VFE M +D WN MI G +N G E L+ F +M ESG PD+
Sbjct: 438 IDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDH 497
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
T L CS HA ++ R F +++ E
Sbjct: 498 VTMIGTLCACS-----------HAGLVEEGRRYFFSMTK-----------------EHGL 529
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+P+ D + ++ L G E+A +L E M +PD + + +LSAC + G
Sbjct: 530 LPVKD--HYTCMVDLLGRAGCLEEAKDLIESM---PKQPDAVVWSSLLSACKVHRNITLG 584
Query: 456 RYYFDCMKNKYF-LQPRSA-HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV-WGA 512
+Y + K F + P S+ Y + ++ G +A+++ +R G+ P W
Sbjct: 585 KY----VAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSW-- 638
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLIL 547
I +N+ V + +R P +Y IL
Sbjct: 639 ----IDIQSNVHVFMVKDKR----HPQKKEIYSIL 665
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 219/503 (43%), Gaps = 72/503 (14%)
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
++V N +I C +D A F M R+V S+ +++ L+R G + E+ LF M
Sbjct: 57 EEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLM 116
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
P KD +WN MIAG+ + A D F +MH D ++N + +S
Sbjct: 117 PEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDF---------VLNDYSFGSGLSACS 167
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIK 290
++ + L + H + K YS ++ + +I Y + G VG A +
Sbjct: 168 RLKDL---------------KLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARR 212
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
VF+ M ++V WN +I +N E L+ F +M E G PD T SV++ C+ L
Sbjct: 213 VFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAA 272
Query: 351 LDLGRQIHAQAIKIA--RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH--------- 399
G QIHA+ +K RN + NA++ MYA+CG + A F +P+
Sbjct: 273 FKEGVQIHARVVKSDKFRNDL-ILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMV 331
Query: 400 ----------------------DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
DI+SWN++I G +G E+AL LF ++ P
Sbjct: 332 SGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHY 391
Query: 438 TFVGVLSACSYAGLVDQGRY-YFDCMKNKYFLQ----PRSAHYTCVVDLLGRFGLIDEAM 492
TF +L+A + ++ GR + +K+ + Q P ++D+ + G ++E +
Sbjct: 392 TFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGL 451
Query: 493 NLLNEIRADGIEVSPTVWGAL-LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMY 551
+ + +E W + +G + ++ E+ ++++E V +I T
Sbjct: 452 RVFENM----VEKDHVSWNTMIIGYAQNGYGMEALELF-QKMLESGEKPDHVTMIGTLCA 506
Query: 552 LS-CGRREDAKRIFAQM-KENGV 572
S G E+ +R F M KE+G+
Sbjct: 507 CSHAGLVEEGRRYFFSMTKEHGL 529
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 28/248 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
++A ++ A+++F + Q+D V+WN +I GY +NG + A+ LF + + +T+
Sbjct: 336 KSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGN 395
Query: 58 VIAGLMQSDNVQGAKEV----------FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFH 107
++ +++ ++ F E D+ NS+I Y+ G ++E LRVF
Sbjct: 396 LLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFE 455
Query: 108 GMPLKDVVSWN-LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVN--------GLVRE 158
M KD VSWN ++IG N M+ E + K + + + M+ GLV E
Sbjct: 456 NMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEE 515
Query: 159 GR--IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR-DLTSWKQLIN 215
GR K +P KD + M+ GC+ A+DL + M + D W L++
Sbjct: 516 GRRYFFSMTKEHGLLPVKD--HYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLS 573
Query: 216 GLVNSRRI 223
R I
Sbjct: 574 ACKVHRNI 581
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 115/302 (38%), Gaps = 73/302 (24%)
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG--------- 384
D++ F +L +C L + R +H + I+ + + N +I +Y +CG
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 385 ------------NIQSALLE----------FSSVPIHDIISWNSIICGLAYHGYAEKALE 422
+I S L+ FS +P D SWNS+I G A H E+AL+
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 423 LFERMRLTDFKPDDITFVGVLSACSY---------------------------------- 448
F RM DF +D +F LSACS
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202
Query: 449 -AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
GLV R FD M+ K + + C++ + G EA+ + G +
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVS-----WNCLITCYEQNGPAIEALEAFGRMTELGFKPDE 257
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFA 565
+++ AC K G RV++ + + + L L +MY CGR +A+ +F
Sbjct: 258 VTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFD 317
Query: 566 QM 567
+M
Sbjct: 318 RM 319
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 83/211 (39%), Gaps = 56/211 (26%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ ++E +F+ M ++D V+WN MI GY +NG+ A+ LF +M E
Sbjct: 442 MKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESG--------- 492
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
E D VT + GL++E R F M
Sbjct: 493 ------------------EKPDHVTMIGTLCACSHAGLVEEGRRYFFSMT---------- 524
Query: 121 IGALVNCQRMDLAESYFKEMGARDVAS-WTIMVNGLVREGRIVEARKLFDKMPAK-DVQA 178
KE G V +T MV+ L R G + EA+ L + MP + D
Sbjct: 525 -----------------KEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVV 567
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
W+ +++ + + + + + +K+ + D TS
Sbjct: 568 WSSLLSACKVHRNITLGKYVAEKIFEIDPTS 598
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 200/628 (31%), Positives = 338/628 (53%), Gaps = 48/628 (7%)
Query: 21 TVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
T N ++ Y K+G L A +F++MP+ ++FT N +++ L S V + +F M
Sbjct: 48 TFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPE 107
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGM-------PLKDVVSWNLVI---------GAL 124
RD V++N++I+G+ G +++++ + P + +S +++ G
Sbjct: 108 RDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHS 167
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
V+CQ + L + +G+ V + M GL+R+ AR++F +M AK V +N +I
Sbjct: 168 VHCQVLRLGFGAYAFVGSPLVDMYAKM--GLIRD-----ARRVFQEMEAKTVVMYNTLIT 220
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKT 240
G L + A+ LFQ M DRD +W ++ GL + A+ F++M + T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280
Query: 241 WNSIISV---LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEMGEVGSAIKV 291
+ SI++ L + K+ H+Y+ + Y + NV VG Y + + A V
Sbjct: 281 FGSILTACGALAASEEGKQIHAYITRTWYED-----NVFVGSALVDMYSKCRSIRLAEAV 335
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F MT R++ W MI G G+N EE ++ F +M+ G PD+ T SV++ C++L +L
Sbjct: 336 FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASL 395
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
+ G Q H A+ ++ TVSNA++T+Y +CG+I+ A F + HD +SW +++ G
Sbjct: 396 EEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGY 455
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
A G A++ ++LFE+M + KPD +TF+GVLSACS AGLV++G YFD M+ + + P
Sbjct: 456 AQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPI 515
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV--WGALLGACRIHNNIKVGEIA 529
HYTC++DL R G EA + + + SP W LL +CR+ N+++G+ A
Sbjct: 516 DDHYTCMIDLYSRSGRFKEAEEFIKQ-----MPHSPDAFGWATLLSSCRLRGNMEIGKWA 570
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
E ++E +P N Y++L M+ + G+ + + M++ VKKEPGCSWI+ + H+
Sbjct: 571 AENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHI 630
Query: 590 FLSGDSSHPKFHRLRYLLNLLHTEIERE 617
F + D SHP R+ L L++++ E
Sbjct: 631 FSADDQSHPFSSRIYEKLEWLNSKMAEE 658
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 180/430 (41%), Gaps = 78/430 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I++A+ +F +M + V +N +I G + +++A LF M +RD T+ T++ GL Q+
Sbjct: 197 IRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQN 256
Query: 66 DNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGL-IDEALRVFHGMPLKDVVSWNLV 120
A +VF M D T+ S+++ C L E + H + N+
Sbjct: 257 GLQLEALDVFRRMRAEGVGIDQYTFGSILTA--CGALAASEEGKQIHAYITRTWYEDNVF 314
Query: 121 IG-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
+G ALV+ C+ + LAE+ F+ M R++ SWT M+ G + EA + F +M
Sbjct: 315 VGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDG 374
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
++ + + G + + C +A + + L++GL+ R I +
Sbjct: 375 IKPDDFTL-GSVISSCANLAS-----LEEGAQFHCLALVSGLM--RYITVS--------- 417
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
N+++++ + G +++AH ++ + + SWT ++ GY + G+ I +FE M
Sbjct: 418 ------NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKM 471
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG- 354
GLK PD TF VL+ CS ++ G
Sbjct: 472 LV--------------------NGLK-----------PDGVTFIGVLSACSRAGLVEKGC 500
Query: 355 -----RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSII 408
Q + I + +T MI +Y+R G + A +P D W +++
Sbjct: 501 DYFDSMQKDHDIVPI-DDHYT----CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLL 555
Query: 409 CGLAYHGYAE 418
G E
Sbjct: 556 SSCRLRGNME 565
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 143/333 (42%), Gaps = 57/333 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+R I++A+ LF M RD++TW M+ G +NG A+ +F +M D +T+
Sbjct: 223 LRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFG 282
Query: 57 TVI---AGLMQSD--------------------------------NVQGAKEVFDGMEVR 81
+++ L S+ +++ A+ VF M R
Sbjct: 283 SILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR 342
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV----NCQRMDLAESYF 137
++++W +MI GY N +EA+R F M + + + +G+++ N ++ +
Sbjct: 343 NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFH 402
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ + + N LV + G I +A +LFD+M D +W ++ GY G
Sbjct: 403 CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAK 462
Query: 194 VAEDLFQKM----HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE-----TCEKTWNSI 244
DLF+KM D ++ +++ + ++ YF M + + + +
Sbjct: 463 ETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCM 522
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIA-SWTNVI 276
I + R+G KEA ++++ P+S A W ++
Sbjct: 523 IDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLL 555
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 204/632 (32%), Positives = 344/632 (54%), Gaps = 47/632 (7%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGA 71
+ + Q +T N +I Y+K G L A +F+ +P+ ++F++NT+++ + +
Sbjct: 31 ILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYSKLGLLSQM 90
Query: 72 KEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV--------SWNLVIGA 123
+++F+ M RD V+WN ISGY G +A+RV+ M LKD S L++ +
Sbjct: 91 QQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLM-LKDAAMNLNRITFSTMLILCS 149
Query: 124 LVNCQRMDLAESY----FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
C +DL K DV + +V+ + G I +A++ FD+MP ++V
Sbjct: 150 KFRC--VDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMC 207
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-- 237
N MI G + G + ++ LF + +RD SW +I GL+ + A+ F++M
Sbjct: 208 NTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFA 267
Query: 238 --EKTWNSIISV---LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEMGEVG 286
+ T+ S+++ L+ G K+ H+Y+ + + + NV VG Y + +
Sbjct: 268 MDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKD-----NVFVGSALVDMYSKCRSIK 322
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
SA VF+ M ++V W M+ G G+N EE +K F +M+ +G PD+ T SV++ C+
Sbjct: 323 SAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCA 382
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
+L +L+ G Q H +A+ F TVSNA+IT+Y +CG+ +++ F+ + I D +SW +
Sbjct: 383 NLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTA 442
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
++ G A G A + + LFERM KPD +TF+GVLSACS AGLV++G YF+ M ++
Sbjct: 443 LLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEH 502
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV--WGALLGACRIHNNIK 524
+ P H TC++DLLGR G ++EA N +N + P V W LL +CR+H +++
Sbjct: 503 GIMPIVDHCTCIIDLLGRAGRLEEARNFINN-----MPCHPDVVGWATLLSSCRVHGDME 557
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIN 584
+G+ A + ++ LEP N Y++L+ +Y S G+ + ++ M++ V+KEPG SWI+
Sbjct: 558 IGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYK 617
Query: 585 DGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
HVF + D S P L ++ E+E+
Sbjct: 618 GKVHVFSADDQSSP-------FLGQIYAELEK 642
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 185/427 (43%), Gaps = 72/427 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I +A+ FD+MP+R+ V N MI G + G ++ + LF + ERD ++ +I GLMQ+
Sbjct: 189 IYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQN 248
Query: 66 DNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEAL---RVFHGMPLKDVVSWN 118
+ A ++F M + D T+ S+++ C L+ AL + H ++ N
Sbjct: 249 GLEREALDMFREMRLAGFAMDQFTFGSVLTA--CGSLL--ALGEGKQIHAYVIRTDHKDN 304
Query: 119 LVIG-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
+ +G ALV+ C+ + AE+ FK M ++V SWT M+ G + G EA K+F +M
Sbjct: 305 VFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQR 364
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
V+ + + G + + C +A + + + L++GL++ +
Sbjct: 365 NGVEPDDFTL-GSVISSCANLAS-----LEEGAQFHCRALVSGLISFITVS--------- 409
Query: 234 PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE 293
N++I++ + G + +H + + SWT ++ GY + G+ I +FE
Sbjct: 410 --------NALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFE 461
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
M GLK PD TF VL+ CS ++
Sbjct: 462 RMLA--------------------HGLK-----------PDGVTFIGVLSACSRAGLVEK 490
Query: 354 GRQIHAQAIK-IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGL 411
G Q IK +I + R G ++ A +++P H D++ W +++
Sbjct: 491 GLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSC 550
Query: 412 AYHGYAE 418
HG E
Sbjct: 551 RVHGDME 557
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 150/339 (44%), Gaps = 69/339 (20%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
MR I+E+Q LF + +RD+++W +MI G +NG A+ +F +M D FT+
Sbjct: 215 MRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFG 274
Query: 57 TVI----------------AGLMQSDN-------------------VQGAKEVFDGMEVR 81
+V+ A ++++D+ ++ A+ VF M +
Sbjct: 275 SVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQK 334
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV----NCQRMDLAESYF 137
+V++W +M+ GY NG +EA+++F M V + +G+++ N ++ +
Sbjct: 335 NVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFH 394
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ S+ + N L+ + G + +LF +M +D +W ++AGY G
Sbjct: 395 CRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKAN 454
Query: 194 VAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMPE-----------TCE 238
LF++M L ++ +++ + ++ + YF+ M + TC
Sbjct: 455 ETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTC- 513
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYP-YSNIASWTNVI 276
II +L R G ++EA +++ P + ++ W ++
Sbjct: 514 -----IIDLLGRAGRLEEARNFINNMPCHPDVVGWATLL 547
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 99/240 (41%), Gaps = 11/240 (4%)
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
S + + S+L +C + +++H +K + T +SN +IT Y + GN+ A
Sbjct: 2 SSSSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHH 61
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F +P ++ SWN+I+ + G + ++F M D ++ G +Y
Sbjct: 62 VFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGY---ANYGSC 118
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
D R Y +K+ R T ++ L +F +D + +I G
Sbjct: 119 SDAVRVYKLMLKDAAMNLNRITFSTMLI-LCSKFRCVDLGRQINGQILKFGFGSD----- 172
Query: 512 ALLGACRIHNNIKVGEI--AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
+G+ + K+G I A E+ N + + + CG E+++R+F +KE
Sbjct: 173 VFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKE 232
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 209/642 (32%), Positives = 327/642 (50%), Gaps = 32/642 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ + A+ +FDKM Q+D ++W +I GY A+ LF M + I
Sbjct: 60 VKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFIL 119
Query: 61 GL------MQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGM 109
L + SD G E+ G V+ V ++++ Y NG I E RVFH M
Sbjct: 120 SLAHKACGLNSDVNYG--ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEM 177
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEAR 165
P+++VVSW +I LV A YF EM D ++ I + G + R
Sbjct: 178 PMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGR 237
Query: 166 KLFDKMPAK--DVQAW--NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
++ + K DV ++ N + Y G + LF+KM RD+ SW +I LV
Sbjct: 238 EIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMG 297
Query: 222 RIDAAISYFKQMPET----CEKTWNSIISV---LIRNGLVKEAHSYLEKYPYSNIASWTN 274
+ + A+ F +M E+ E T+ ++IS L R ++ H+ + + S N
Sbjct: 298 QEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVEN 357
Query: 275 VIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
I+ Y + G++ S+ +F MT RD+ W+ +I G + E + M+ GP P
Sbjct: 358 SIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKP 417
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
SVL+ C ++ L+ G+Q+HA + I V +A+I MY +CG+I+ A F
Sbjct: 418 TEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIF 477
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ DI+SW ++I G A HGY+ + ++LFE++ +PD +TF+GVLSACS+AGLVD
Sbjct: 478 DAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVD 537
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
G +YF+ M KY + P HY C++DLL R G + +A ++ I A VW L
Sbjct: 538 LGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHM---IEAMPFHRDDVVWSTL 594
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
L ACR+H +++ G ER+++LEPN +G ++ L +Y S G+ +A I MK GV
Sbjct: 595 LRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVI 654
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
KEPG SWI++ D F++GD SHP+ + +L+LL + E
Sbjct: 655 KEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTE 696
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 199/630 (31%), Positives = 331/630 (52%), Gaps = 62/630 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++E + +FDK+ WN+++ GY K G ++ LF +M E +
Sbjct: 152 LREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRE-------------LGI 198
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
V+ A+++FD + RDV++WNSMISGYV NGL ++ L D+ L++G +
Sbjct: 199 RRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGL---------DLFEQMLLLG--I 247
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL----FDKMPAKDVQAWNL 181
N D+A+ +V G G ++ R L K++ N
Sbjct: 248 N----------------TDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNC 291
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK-- 239
++ Y +G + A +F+ M +R + SW +I G D ++ F +M +
Sbjct: 292 LLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPD 351
Query: 240 --TWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFE 293
T +I+ GL+ K+ H+Y+++ + +N ++ Y + G +G A VF
Sbjct: 352 IFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFS 411
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
M +D+ WN MI G +N L E L FV+M+ + P++ T +L C+ L L+
Sbjct: 412 EMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALER 470
Query: 354 GRQIHAQAIKIARNQFTT---VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
G++IH I RN F+ V+NA++ MY +CG + A L F +P D++SW +I G
Sbjct: 471 GQEIHGH---ILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAG 527
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
HGY +A+ F MR + +PD+++F+ +L ACS++GL+D+G +F+ M+N ++P
Sbjct: 528 YGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEP 587
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
+S HY C+VDLL R G + +A I+ IE T+WGALL CRI++++K+ E
Sbjct: 588 KSEHYACIVDLLARAGNLSKAYKF---IKMMPIEPDATIWGALLCGCRIYHDVKLAEKVA 644
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVF 590
E V ELEP N+G Y++L +Y + E+ K++ ++ G++K PGCSWI+I H+F
Sbjct: 645 EHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIF 704
Query: 591 LSGDSSHPKFHRLRYLLNLLHTEIEREILF 620
++GDSSHP +++ LL T ++ E F
Sbjct: 705 VTGDSSHPLANKIELLLKKTRTRMKEEGHF 734
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 208/479 (43%), Gaps = 87/479 (18%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIA 60
R++ A+ LFD++ RD ++WN MI GY NG + + LF QM D+ T +V+A
Sbjct: 200 RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVA 259
Query: 61 GL-----------------------------------MQSDNVQGAKEVFDGMEVRDVVT 85
G +S N+ A +VF+ M R VV+
Sbjct: 260 GCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVS 319
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDLAE------SYFK 138
W SMI+GY GL D ++R+FH M + + I +++ C L E +Y K
Sbjct: 320 WTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIK 379
Query: 139 EMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
E + D+ +++ + G + +A +F +M KD+ +WN MI GY N A +
Sbjct: 380 ENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALN 439
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
LF +M + N + + + A S ++ L R +E
Sbjct: 440 LFVEMQ------YNSKPNSITMACILPACAS----------------LAALERG---QEI 474
Query: 258 HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
H ++ + +S N +V Y + G +G A +F+++ +D+ W VMI G G + G
Sbjct: 475 HGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYG 534
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA- 375
E + F +M+ SG PD +F S+L CS LD G + RN +
Sbjct: 535 SEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGF----FNMMRNNCCIEPKSE 590
Query: 376 ----MITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGL-AYH--GYAEKALE-LFE 425
++ + AR GN+ A +PI D W +++CG YH AEK E +FE
Sbjct: 591 HYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFE 649
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 155/350 (44%), Gaps = 60/350 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
++ + A +F+ M +R V+W MI GY + G D ++ LF++M + D+FT T
Sbjct: 298 KSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITT 357
Query: 58 VI-----AGL---------------MQSD---------------NVQGAKEVFDGMEVRD 82
++ GL MQSD ++ A VF M+V+D
Sbjct: 358 ILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKD 417
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
+V+WN+MI GY N L +EAL +F M + + L C + E + G
Sbjct: 418 IVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGH 477
Query: 143 ---------RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
R VA+ +V+ ++ G + AR LFD +P KD+ +W +MIAGY +G
Sbjct: 478 ILRNGFSLDRHVAN--ALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGS 535
Query: 194 VAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSI 244
A F +M + D S+ ++ +S +D +F M C + + I
Sbjct: 536 EAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACI 595
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKVFE 293
+ +L R G + +A+ +++ P A+ W ++ G +V A KV E
Sbjct: 596 VDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAE 645
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 218/741 (29%), Positives = 354/741 (47%), Gaps = 128/741 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------- 48
+ + +A+ +FDKM +R TWN M+ GY NG A+ ++ +M
Sbjct: 4 KCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPV 63
Query: 49 --------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR- 81
+ +F N+++A + +++ GA+++FD M VR
Sbjct: 64 LLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRN 123
Query: 82 DVVTWNSMISGYVCNGLIDEALRVF----------------------------------H 107
DVV+WNS+IS Y NG+ EAL +F H
Sbjct: 124 DVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIH 183
Query: 108 GMPLK-----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIV 162
LK DV N ++ V +M A F + +D+ +W M+ G ++ G
Sbjct: 184 AAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYS 243
Query: 163 EARKLFDKMPAKD-----VQAWNLMIA----GYLDNG----------------------- 190
EA + F + D V ++++A GYL NG
Sbjct: 244 EALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLI 303
Query: 191 -------CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWN 242
C+ F M +DL SW G ++ A+ +Q+ E +
Sbjct: 304 DMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDAT 363
Query: 243 SIISVLIRN------GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
I S+L+ G +KE H Y + S+ +I Y E G + A+++FE +
Sbjct: 364 MIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIE 423
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+DV W MI N L + L+ F MKE+G PD T S+L+ L TL G++
Sbjct: 424 CKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKE 483
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
IH I+ ++SN ++ MYARCG+++ A F+ ++I W ++I HGY
Sbjct: 484 IHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGY 543
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
E A+ELF RM+ PD ITF+ +L ACS++GLV++G+ + + MK +Y L+P HYT
Sbjct: 544 GEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYT 603
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
C+VDLLGR ++EA ++ ++ E +P VW ALLGACRIH+N ++GE+A E+++EL
Sbjct: 604 CLVDLLGRRNCLEEAYQIVKSMQN---EPTPEVWCALLGACRIHSNKEIGEVAAEKLLEL 660
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSS 596
+ +N G Y++++ ++ + GR +D + + +MK +G+ K PGCSWI++ + H FLS D
Sbjct: 661 DLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKL 720
Query: 597 HPKFHRLRYLLNLLHTEIERE 617
HP+ ++ L + +++RE
Sbjct: 721 HPECDKIYQKLAQVTEKLKRE 741
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 167/383 (43%), Gaps = 31/383 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R ++ EA +F + +D VTWN M+ G+ +NG A+ F + D+ I
Sbjct: 206 VRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSII 265
Query: 61 GLMQSDNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMP 110
++ + G + +G E+ +++ N++I Y + R F M
Sbjct: 266 SIIVASGRLGY--LLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMA 323
Query: 111 LKDVVSWNLVIGALVN----CQRMDLAESYFKE---MGARDVASWTIMVNGLVREGRIVE 163
KD++SW Q ++L E + A + S + GL G+I E
Sbjct: 324 HKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKE 383
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
+ D N +I Y + G + A +F+ + +D+ SW +I+ V++
Sbjct: 384 IHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLA 443
Query: 224 DAAISYFKQMPET-CEKTWNSIISVL--------IRNGLVKEAHSYLEKYPYSNIASWTN 274
+ A+ F M ET E + +++S+L ++ G KE H ++ + + S +N
Sbjct: 444 NKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKG--KEIHGFIIRKGFILEGSISN 501
Query: 275 VIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
+V Y G V A K+F R++ +W MI G + GE ++ F++MK+ P
Sbjct: 502 TLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIP 561
Query: 334 DNATFTSVLTICSDLPTLDLGRQ 356
D+ TF ++L CS ++ G+
Sbjct: 562 DHITFLALLYACSHSGLVNEGKS 584
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 8/238 (3%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G V A +F+ M+ R + WN M+ G N L+ + +M+ G S D+ TF
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+L C + L G +IH AIK + F V N+++ +YA+C +I A F + +
Sbjct: 62 PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYV 121
Query: 399 -HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-R 456
+D++SWNSII + +G +AL LF M + TF L AC + + G +
Sbjct: 122 RNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQ 181
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
+ +K+ L A+ +V + RFG + EA + + I W ++L
Sbjct: 182 IHAAILKSGRVLDVYVAN--ALVAMYVRFGKMPEAAVIFGNLEGKDI----VTWNSML 233
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 42/227 (18%)
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MY +CG++ A + F + I +WN+++ G +G A ALE++ MR D T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 439 FVGVLSACS-----YAGLVDQG---RY---------------YFDC--------MKNKYF 467
F +L AC + G G +Y Y C + ++ +
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
++ + ++ G+ EA+ L +E+ G+ + + A L AC + IK+G
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 528 ------IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+ RV+++ N+ L MY+ G+ +A IF ++
Sbjct: 181 QIHAAILKSGRVLDVYVANA-----LVAMYVRFGKMPEAAVIFGNLE 222
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 216/666 (32%), Positives = 346/666 (51%), Gaps = 87/666 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
+ +++ + +FD+M RD V+WN ++ GY N F D LF M D +T +T
Sbjct: 149 KTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVST 208
Query: 58 VIAGLM-----------------------------------QSDNVQGAKEVFDGMEVRD 82
VIA L +S ++ A+ VFD ME +D
Sbjct: 209 VIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKD 268
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAE---- 134
V+WNSMI+G+V NG EA F+ M L ++ VI + + + + L
Sbjct: 269 SVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHC 328
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA-KDVQAWNLMIAGYLDNGCVG 193
K + + T ++ L + I +A LF M + V +W MI+GYL NG
Sbjct: 329 KTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTD 388
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A +LF M RR ++F T+++I++V
Sbjct: 389 QAVNLFSLM------------------RREGVKPNHF---------TYSTILTVQ-HAVF 420
Query: 254 VKEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+ E H+ + K Y +S T ++ + ++G + A+KVFEL+ T+DV W+ M+ G +
Sbjct: 421 ISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQ 480
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT--LDLGRQIHAQAIKIARNQFT 370
EE K F Q+ G P+ TF S++ C+ PT ++ G+Q HA AIK+ N
Sbjct: 481 AGETEEAAKIFHQLTREGIKPNEFTFCSIINACT-APTASVEQGKQFHAYAIKLRLNNAL 539
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
VS++++T+YA+ GNI+SA F D++SWNS+I G A HG A+KALE+FE M+
Sbjct: 540 CVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKR 599
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
+ + D ITF+GV+SAC++AGLV +G+ YF+ M N + + P HY+C++DL R G++ +
Sbjct: 600 NLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGK 659
Query: 491 AMNLLNEIRADGIEVSP--TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
AM+++N G+ P TVW +L A R+H NI++G++A E+++ LEP +S Y++L+
Sbjct: 660 AMDIIN-----GMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLS 714
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
+Y + G + + M + VKKEPG SWI++ + + FL+GD SHP + L+
Sbjct: 715 NIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLS 774
Query: 609 LLHTEI 614
L+T +
Sbjct: 775 ELNTRL 780
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 131/571 (22%), Positives = 230/571 (40%), Gaps = 124/571 (21%)
Query: 40 AMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF-----DGME--------------- 79
A LF+Q P RD+ +N ++ + D Q A +F G+
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 80 -------------------VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-- 118
V + NS++ Y G + + RVF M +DVVSWN
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174
Query: 119 ---------------------------------LVIGALVNCQRMDLAESYFKEMGARDV 145
VI AL N + + +
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGF 234
Query: 146 ASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+ ++ N L+ + G + +AR +FD M KD +WN MIAG++ NG
Sbjct: 235 ETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVING----------- 283
Query: 202 MHDRDLTSWKQLIN-GLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
+DL +++ N L ++ A F + ++C + L GLV+ H
Sbjct: 284 ---QDLEAFETFNNMQLAGAKPTHAT---FASVIKSC--------ASLKELGLVRVLHCK 329
Query: 261 LEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMT-TRDVTVWNVMIFGLGENDLGEE 318
K S N T ++V + E+ A +F LM + V W MI G +N ++
Sbjct: 330 TLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQ 389
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
+ F M+ G P++ T++++LT+ + +IHA+ IK + ++V A++
Sbjct: 390 AVNLFSLMRREGVKPNHFTYSTILTVQHAV----FISEIHAEVIKTNYEKSSSVGTALLD 445
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
+ + GNI A+ F + D+I+W++++ G A G E+A ++F ++ KP++ T
Sbjct: 446 AFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFT 505
Query: 439 FVGVLSACSY-AGLVDQGRYYFDCMKNKYFLQPRSAHYTCV----VDLLGRFGLIDEAMN 493
F +++AC+ V+QG+ + + Y ++ R + CV V L + G I+ A
Sbjct: 506 FCSIINACTAPTASVEQGKQF-----HAYAIKLRLNNALCVSSSLVTLYAKRGNIESA-- 558
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
+EI E W +++ H K
Sbjct: 559 --HEIFKRQKERDLVSWNSMISGYAQHGQAK 587
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/482 (22%), Positives = 198/482 (41%), Gaps = 73/482 (15%)
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
++C L +S+ + AR L+R+ A++LFD+ P +D++ N ++
Sbjct: 26 LHCHANPLLQSHVVALNART----------LLRDSDPRFAQQLFDQTPLRDLKQHNQLLF 75
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI 244
Y A LF ++ L+ +S + +S C ++N
Sbjct: 76 RYSRCDQTQEALHLFVSLYRSGLSP---------DSYTMSCVLS-------VCAGSFNGT 119
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVW 303
+ ++ H K + S N +V Y + G V +VF+ M RDV W
Sbjct: 120 VG--------EQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSW 171
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
N ++ G N ++ + F M+ G PD T ++V+ ++ + +G QIHA +K
Sbjct: 172 NSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVK 231
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
+ V N++I+M ++ G ++ A + F ++ D +SWNS+I G +G +A E
Sbjct: 232 LGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFET 291
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY-YFDCMKNKYFLQPRSAHYTCVV--- 479
F M+L KP TF V+ +C A L + G C K L T ++
Sbjct: 292 FNNMQLAGAKPTHATFASVIKSC--ASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVAL 349
Query: 480 -------DLLGRFGLI----------------------DEAMNLLNEIRADGIEVSPTVW 510
D F L+ D+A+NL + +R +G++ + +
Sbjct: 350 TKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTY 409
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
+L + + + + EI E + +S V L + ++ G DA ++F ++
Sbjct: 410 STIL---TVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETK 466
Query: 571 GV 572
V
Sbjct: 467 DV 468
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 209/642 (32%), Positives = 326/642 (50%), Gaps = 32/642 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ + A+ +FDKM Q+D ++W +I GY A+ LF M + I
Sbjct: 60 VKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFIL 119
Query: 61 GL------MQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGM 109
L + SD G E+ G V+ V ++++ Y NG I E RVFH M
Sbjct: 120 SLAHKACGLNSDVNYG--ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEM 177
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEAR 165
P+++VVSW +I LV A YF EM D ++ I + G + R
Sbjct: 178 PMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGR 237
Query: 166 KLFDKMPAK--DVQAW--NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
++ + K DV ++ N + Y G + LF+KM RD+ SW +I LV
Sbjct: 238 EIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMG 297
Query: 222 RIDAAISYFKQMPET----CEKTWNSIISV---LIRNGLVKEAHSYLEKYPYSNIASWTN 274
+ + A+ F +M E+ E T+ ++IS L R ++ H+ + + S N
Sbjct: 298 QEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVEN 357
Query: 275 VIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
I+ Y + G++ S+ +F MT RD+ W+ +I G + E + M+ GP P
Sbjct: 358 SIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKP 417
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
SVL+ C ++ L+ G+Q+HA + I V +A+I MY +CG+I+ A F
Sbjct: 418 TEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIF 477
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ DI+SW ++I G A HGY+ + ++LFE++ +PD +TF+GVLSACS+AGLVD
Sbjct: 478 DAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVD 537
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
G YF+ M KY + P HY C++DLL R G + +A ++ I A VW L
Sbjct: 538 LGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHM---IEAMPFHRDDVVWSTL 594
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
L ACR+H +++ G ER+++LEPN +G ++ L +Y S G+ +A I MK GV
Sbjct: 595 LRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVI 654
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
KEPG SWI++ D F++GD SHP+ + +L+LL + E
Sbjct: 655 KEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTE 696
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 200/630 (31%), Positives = 337/630 (53%), Gaps = 52/630 (8%)
Query: 21 TVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
T N ++ Y K+G L A +F++MP+ ++FT N +++ L S V + +F M
Sbjct: 48 TFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPE 107
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGM-------PLKDVVSWNLVI---------GAL 124
RD V++N++I+G+ G +++++ + P + +S +++ G
Sbjct: 108 RDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHS 167
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
V+CQ + L + +G+ V + M GL+R+ AR++F +M AK V +N +I
Sbjct: 168 VHCQVLRLGFGAYAFVGSPLVDMYAKM--GLIRD-----ARRVFQEMEAKTVVMYNTLIT 220
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKT 240
G L + A+ LFQ M DRD +W ++ GL + A+ F++M + T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280
Query: 241 WNSIISVL-----IRNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEMGEVGSAI 289
+ SI++ + G K+ H+Y+ + Y + NV VG Y + + A
Sbjct: 281 FGSILTACGALAALEEG--KQIHAYITRTWYED-----NVFVGSALVDMYSKCRSIRLAE 333
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
VF MT R++ W MI G G+N EE ++ F +M+ G PD+ T SV++ C++L
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLA 393
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
+L+ G Q H A+ ++ TVSNA++T+Y +CG+I+ A F + HD +SW +++
Sbjct: 394 SLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVT 453
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
G A G A++ ++LFE+M KPD +TF+GVLSACS AGLV++G YFD M+ + +
Sbjct: 454 GYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIV 513
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV--WGALLGACRIHNNIKVGE 527
P HYTC++DL R G EA + + + SP W LL +CR+ N+++G+
Sbjct: 514 PIDDHYTCMIDLYSRSGRFKEAEEFIKQ-----MPHSPDAFGWATLLSSCRLRGNMEIGK 568
Query: 528 IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGG 587
A E ++E +P N Y++L M+ + G+ + + M++ VKKEPGCSWI+ +
Sbjct: 569 WAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKV 628
Query: 588 HVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
H+F + D SHP R+ L L++++ E
Sbjct: 629 HIFSADDQSHPFSSRIYEKLEWLNSKMAEE 658
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 164/355 (46%), Gaps = 38/355 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I++A+ +F +M + V +N +I G + +++A LF M +RD T+ T++ GL Q+
Sbjct: 197 IRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQN 256
Query: 66 DNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
A +VF M D T+ S+++ ++E ++ H + N+ +
Sbjct: 257 GLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQI-HAYITRTWYEDNVFV 315
Query: 122 G-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
G ALV+ C+ + LAE+ F+ M R++ SWT M+ G + EA + F +M +
Sbjct: 316 GSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI 375
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
+ + + G + + C +A + + L++GL+ R I +
Sbjct: 376 KPDDFTL-GSVISSCANLAS-----LEEGAQFHCLALVSGLM--RYITVS---------- 417
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
N+++++ + G +++AH ++ + + SWT ++ GY + G+ I +FE M
Sbjct: 418 -----NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKML 472
Query: 297 TRDVTVWNVMIFGL----GENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICS 346
+ V G+ L E+G +F M K+ G P + +T ++ + S
Sbjct: 473 ANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYS 527
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 141/333 (42%), Gaps = 57/333 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+R I++A+ LF M RD++TW M+ G +NG A+ +F +M D +T+
Sbjct: 223 LRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFG 282
Query: 57 TV------IAGLMQSDNVQG-----------------------------AKEVFDGMEVR 81
++ +A L + + A+ VF M R
Sbjct: 283 SILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR 342
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV----NCQRMDLAESYF 137
++++W +MI GY N +EA+R F M + + + +G+++ N ++ +
Sbjct: 343 NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFH 402
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ + + N LV + G I +A +LFD+M D +W ++ GY G
Sbjct: 403 CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAK 462
Query: 194 VAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMPE-----TCEKTWNSI 244
DLF+KM L ++ +++ + ++ YF M + + + +
Sbjct: 463 ETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCM 522
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIA-SWTNVI 276
I + R+G KEA ++++ P+S A W ++
Sbjct: 523 IDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLL 555
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 200/630 (31%), Positives = 337/630 (53%), Gaps = 52/630 (8%)
Query: 21 TVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
T N ++ Y K+G L A +F++MP+ ++FT N +++ L S V + +F M
Sbjct: 48 TFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPE 107
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGM-------PLKDVVSWNLVI---------GAL 124
RD V++N++I+G+ G +++++ + P + +S +++ G
Sbjct: 108 RDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHS 167
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
V+CQ + L + +G+ V + M GL+R+ AR++F +M AK V +N +I
Sbjct: 168 VHCQVLRLGFGAYAFVGSPLVDMYAKM--GLIRD-----ARRVFQEMEAKTVVMYNTLIT 220
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKT 240
G L + A+ LFQ M DRD +W ++ GL + A+ F++M + T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280
Query: 241 WNSIISVL-----IRNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEMGEVGSAI 289
+ SI++ + G K+ H+Y+ + Y + NV VG Y + + A
Sbjct: 281 FGSILTACGALAALEEG--KQIHAYITRTWYED-----NVFVGSALVDMYSKCRSIRLAE 333
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
VF MT R++ W MI G G+N EE ++ F +M+ G PD+ T SV++ C++L
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLA 393
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
+L+ G Q H A+ ++ TVSNA++T+Y +CG+I+ A F + HD +SW +++
Sbjct: 394 SLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVT 453
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
G A G A++ ++LFE+M KPD +TF+GVLSACS AGLV++G YFD M+ + +
Sbjct: 454 GYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIV 513
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV--WGALLGACRIHNNIKVGE 527
P HYTC++DL R G EA + + + SP W LL +CR+ N+++G+
Sbjct: 514 PIDDHYTCMIDLYSRSGRFKEAEEFIKQ-----MPHSPDAFGWATLLSSCRLRGNMEIGK 568
Query: 528 IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGG 587
A E ++E +P N Y++L M+ + G+ + + M++ VKKEPGCSWI+ +
Sbjct: 569 WAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKV 628
Query: 588 HVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
H+F + D SHP R+ L L++++ E
Sbjct: 629 HIFSADDQSHPFSSRIYEKLEWLNSKMAEE 658
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 164/355 (46%), Gaps = 38/355 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I++A+ +F +M + V +N +I G + +++A LF M +RD T+ T++ GL Q+
Sbjct: 197 IRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQN 256
Query: 66 DNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
A +VF M D T+ S+++ ++E ++ H + N+ +
Sbjct: 257 GLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQI-HAYITRTWYEDNVFV 315
Query: 122 G-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
G ALV+ C+ + LAE+ F+ M R++ SWT M+ G + EA + F +M +
Sbjct: 316 GSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI 375
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
+ + + G + + C +A + + L++GL+ R I +
Sbjct: 376 KPDDFTL-GSVISSCANLAS-----LEEGAQFHCLALVSGLM--RYITVS---------- 417
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
N+++++ + G +++AH ++ + + SWT ++ GY + G+ I +FE M
Sbjct: 418 -----NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKML 472
Query: 297 TRDVTVWNVMIFGL----GENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICS 346
+ V G+ L E+G +F M K+ G P + +T ++ + S
Sbjct: 473 ANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYS 527
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 141/333 (42%), Gaps = 57/333 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+R I++A+ LF M RD++TW M+ G +NG A+ +F +M D +T+
Sbjct: 223 LRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFG 282
Query: 57 TV------IAGLMQSDNVQG-----------------------------AKEVFDGMEVR 81
++ +A L + + A+ VF M R
Sbjct: 283 SILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR 342
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV----NCQRMDLAESYF 137
++++W +MI GY N +EA+R F M + + + +G+++ N ++ +
Sbjct: 343 NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFH 402
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ + + N LV + G I +A +LFD+M D +W ++ GY G
Sbjct: 403 CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAK 462
Query: 194 VAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMPE-----TCEKTWNSI 244
DLF+KM L ++ +++ + ++ YF M + + + +
Sbjct: 463 ETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCM 522
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIA-SWTNVI 276
I + R+G KEA ++++ P+S A W ++
Sbjct: 523 IDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLL 555
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 184/537 (34%), Positives = 290/537 (54%), Gaps = 8/537 (1%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC 127
V+ A+++FD + RD +W M+S Y +G + A VF MP + SW ++ A
Sbjct: 8 VERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALS 67
Query: 128 QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
+ A++ F M RD+ +WTIM+ L I +A+ FD+MP +D+ AW M+A
Sbjct: 68 GHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWTAMLAANA 127
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
+ G + A + F +M +R+L SW L++ S + AA F MPE W ++++
Sbjct: 128 ERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTG 187
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
+G V A + P ++ +WT ++ Y G + ++F+ M RD+ W M+
Sbjct: 188 YSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMV 247
Query: 308 FGLGENDLGEEGLKFFVQMKE-----SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
L ENDL EE + F +M G +P+ TF ++L CS L L GR+IHA
Sbjct: 248 AALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVA 307
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
+ + VSNA++ Y RCG + A + F + D+ISW+S+I A G ++A+E
Sbjct: 308 ERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAME 367
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
L+ RM PDDI F+ VL ACS +G+V+ +F + ++P HY C+VD+L
Sbjct: 368 LYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVL 427
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
GR G + +A +LL R P ++ +L AC+++ +++ GE A E V EL+P NS
Sbjct: 428 GRAGKLRDAEDLL---RLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSS 484
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
Y+ L +Y + R +DA RI M+E G+KK+PGCSWI++ D H F++GD HP+
Sbjct: 485 PYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQ 541
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/586 (23%), Positives = 254/586 (43%), Gaps = 76/586 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R+ + A+ +FD+MP+ +W ++ + +G + A LF+ M ERD+ + ++
Sbjct: 35 RSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQERDLIAWTIMLTV 94
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
L N++ AK FD M RD+V W +M++ G ++ A F MP +++ SW ++
Sbjct: 95 LATFSNIEDAKYHFDQMPERDLVAWTAMLAANAERGQMENARETFDQMPERNLFSWTSLL 154
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
A + A F M ++ +WT M+ G G +V A++ FD MP +D+ AW
Sbjct: 155 SAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTA 214
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE--- 238
M++ Y NG + ++FQ+M +RDL SW ++ LV + ++ + F +MP C
Sbjct: 215 MLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSK 274
Query: 239 -KTWNSIISVLIRNGLV--------KEAHSYLEKYPYSNIASWTNVIVGYF-EMGEVGSA 288
T N + + + + ++ H+ + + + +N +V ++ G +G A
Sbjct: 275 GMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDA 334
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
VF+ M RDV W+ MI + +E ++ + +M G PD+ F SVL CS+
Sbjct: 335 KIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNS 394
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNA-MITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
++ + + + T A M+ + R G ++ A D+
Sbjct: 395 GVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDA---------EDL------ 439
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
+RL F P + ++ +LSAC V++G + + +
Sbjct: 440 -------------------LRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVV---FE 477
Query: 468 LQPR-SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV-WGALLGACRIHNNIKV 525
L P S+ Y + ++ +A + + GI+ P W +L R+H
Sbjct: 478 LDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLD--RVHEF--- 532
Query: 526 GEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
IAG++ + P +Y + +R+ QMKE G
Sbjct: 533 --IAGDK---MHPQRDEIY-------------AEIQRLGRQMKEAG 560
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 20/193 (10%)
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
M+ R G ++ A F ++ D SW ++ A G A +F+RM +
Sbjct: 1 MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLG----S 56
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
+ +LSA + +G ++ + FD M+ + + +T ++ +L F I++A +++
Sbjct: 57 WTALLSAFALSGHHEEAKTLFDTMQERDLIA-----WTIMLTVLATFSNIEDAKYHFDQM 111
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEI--AGERVMELEPNNSGVYLILTEMYLSCGR 556
E W A+L A N + G++ A E ++ N + L Y G
Sbjct: 112 ----PERDLVAWTAMLAA-----NAERGQMENARETFDQMPERNLFSWTSLLSAYGRSGD 162
Query: 557 REDAKRIFAQMKE 569
+ A R+F M E
Sbjct: 163 VKAAGRVFDSMPE 175
>gi|297744558|emb|CBI37820.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 180/508 (35%), Positives = 291/508 (57%), Gaps = 23/508 (4%)
Query: 99 IDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE 158
+DEAL++F M ++VVSWN ++ + ++ A +F M RD AS + +V GL++
Sbjct: 1 MDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQN 60
Query: 159 GRIVEARKLFDKMPAKD------VQAWNLMIAGYLDNGCVGVAEDLFQKM---------- 202
G + EA+++ +D V A+N+++AGY NG V A LF ++
Sbjct: 61 GELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDG 120
Query: 203 --HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
+R++ SW +I V +R I +A F QM E +WN++IS +R ++EA
Sbjct: 121 GRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWML 180
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
++ P + +W ++I G+ + G + A +F + +++ WN MI G N +
Sbjct: 181 FQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGAT 240
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
+ + QM G PD T +SVL++CS L LG QIH Q K ++N++ITMY
Sbjct: 241 ELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIP-INNSLITMY 299
Query: 381 ARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
+RCG I A F V + ++ISWN++I G A+HG+A ALELFE M+ +P ITF
Sbjct: 300 SRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITF 359
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+ VL+AC++AG V +GR +F M ++ ++PR H+ +VD++GR G ++EAM+L+N +
Sbjct: 360 ISVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSM- 418
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRED 559
E VWGALLGACR+HNN+++ +A E +M+LEP +S Y++L MY G+ ++
Sbjct: 419 --PFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDN 476
Query: 560 AKRIFAQMKENGVKKEPGCSWIQINDGG 587
A + M+ N ++K+PG SW+ + G
Sbjct: 477 ATEMRMMMERNNIRKQPGYSWVDSSHSG 504
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 150/529 (28%), Positives = 239/529 (45%), Gaps = 63/529 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ EA LFD M +R+ V+WN M+ G+ +NG ++ A+ F +MPERD + + ++AGL+Q+
Sbjct: 1 MDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQN 60
Query: 66 DNVQGAKEVFDGMEVRD------VVTWNSMISGYVCNGLIDEALRVFHGMPLKD------ 113
+ AK + +D V +N +++GY NG +D+A ++F +P D
Sbjct: 61 GELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDG 120
Query: 114 ------VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
VVSWN +I V + + A F +M RD SW M++G VR + EA L
Sbjct: 121 GRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWML 180
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
F +MP D WN MI+G+ G + +A LF + ++L SW +I G N+ A
Sbjct: 181 FQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGAT 240
Query: 228 SYFKQMPETCEK----TWNSIISV---LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
++QM EK T +S++SV L + H + K +I ++I Y
Sbjct: 241 ELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIPINNSLITMYS 300
Query: 281 EMGEVGSAIKVF-ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
G + A +F E+ ++V WN MI G + + L+ F MK P TF
Sbjct: 301 RCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFI 360
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
SVL C+ HA +K R F +++ C EF P
Sbjct: 361 SVLNACA-----------HAGFVKEGRMHFKSMA---------C--------EFGIEP-- 390
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
I + S++ + HG E+A++L M F+PD + +L AC V+ R
Sbjct: 391 RIEHFASLVDIVGRHGQLEEAMDLINSM---PFEPDKAVWGALLGACRVHNNVELARVAA 447
Query: 460 DCMKNKYFLQPR-SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
+ + L+P SA Y + ++ G D A + + + I P
Sbjct: 448 EALMK---LEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIRKQP 493
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 203/636 (31%), Positives = 326/636 (51%), Gaps = 51/636 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R+++A+ +FD++P R+T ++N ++ Y + G D A LF +P+ D +YN V+A
Sbjct: 64 RLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAA 123
Query: 62 LMQSDNVQGAKEV--FDGMEVRDVV----TWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
L + A + M D V ++ S +S KD
Sbjct: 124 LARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAE---------------KDSR 168
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
+ V G + D DV + +V+ + R +AR++FD MP ++
Sbjct: 169 TGEQVHGLVARSPHAD------------DVHIRSALVDMYAKCERPEDARRVFDAMPERN 216
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
V +WN +I Y NG VG A LF +M + + ++ ++++ AA +Q+
Sbjct: 217 VVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHA 276
Query: 236 ---TCEKTW------NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVG 286
C++ N+++ + + G EA + P +I S T+++ GY + V
Sbjct: 277 HMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVE 336
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A VF M ++V WNV+I +N EE ++ FVQ+K P + T+ +VL C
Sbjct: 337 DAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACG 396
Query: 347 DLPTLDLGRQIHAQAIKIA-RNQFTT-----VSNAMITMYARCGNIQSALLEFSSVPIHD 400
++ L LG+Q H +K R F V N+++ MY + G+I F + D
Sbjct: 397 NIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARD 456
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+SWN++I G A +G A+ AL LFERM ++ PD +T +GVLSAC ++GLVD+GR YF
Sbjct: 457 NVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFH 516
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
M + + P HYTC+VDLLGR G + EA L+N++ +E +W +LLGACR+H
Sbjct: 517 SMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDM---PMEPDSVLWASLLGACRLH 573
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
N+++GE R+ EL+P NSG Y++L+ MY G+ + R+ MK+ GV K+PGCSW
Sbjct: 574 KNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSW 633
Query: 581 IQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
I+I +VFL+ D HP + + L ++ E+ R
Sbjct: 634 IEIGRKMNVFLARDKRHPCRNEIHNTLRIIQMEMGR 669
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 48/257 (18%)
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
G + ++ S P D + P L R HA+ +K T + N +
Sbjct: 8 HHGQELVAHLRASSPLAD---------LLRSAPNLSGARAAHARILKSPVAGETFLLNTL 58
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
++ YAR G ++ A F +P+ + S+N+++ A G ++A LFE + PD
Sbjct: 59 VSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIP----DPDQ 114
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
++ V++A L GR G +A+ L
Sbjct: 115 CSYNAVVAA-----LARHGR-----------------------------GHAADALRFLA 140
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGE-IAGERVMELEPNNSGVYLILTEMYLSCG 555
+ AD ++ + + L AC + + GE + G ++ + L +MY C
Sbjct: 141 AMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCE 200
Query: 556 RREDAKRIFAQMKENGV 572
R EDA+R+F M E V
Sbjct: 201 RPEDARRVFDAMPERNV 217
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 53/172 (30%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ I + +F++M RD V+WN MI GY +NG +A+ LF +M
Sbjct: 437 LKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERM------------- 483
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
L ++N D VT ++S +GL+DE R FH M ++
Sbjct: 484 -LCSNENP-------------DSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGIT---- 525
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
+RD +T MV+ L R G + EA +L + MP
Sbjct: 526 --------------------PSRD--HYTCMVDLLGRAGHLKEAEELINDMP 555
>gi|413917533|gb|AFW57465.1| hypothetical protein ZEAMMB73_932577 [Zea mays]
Length = 677
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 194/630 (30%), Positives = 330/630 (52%), Gaps = 62/630 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R RIQ+AQ LFD+MP+RD ++W ++ Y + G +A +F+ MP R+ ++N +++
Sbjct: 51 RRGRIQDAQQLFDRMPRRDVISWTALLTAYAEGGDFASARLVFDDMPRRNAVSWNALLSL 110
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWNL 119
+ + A +F ++ V++ +I+G G++ EA V+ MP L+D V N
Sbjct: 111 YLGAGRPAAAHALFCKTPAKNAVSYGVIITGLARAGMLREAQAVYGEMPPRLRDPVGSNA 170
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
+I + +D+A F M ARDV SW+ MV+GL + G + EAR+LF+ MP ++V +W
Sbjct: 171 MILGYLRAGEIDMALRVFDTMAARDVISWSSMVDGLCKYGTVSEARRLFEAMPERNVVSW 230
Query: 180 NLMIAGYLD------------------------------NGC------------------ 191
M+ GY+ +GC
Sbjct: 231 TSMVRGYVKCGMYREGLLLFLDMRREGVQVNAITLSVVLDGCAQASLVGEGIQVHCLMTR 290
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN 251
+G D+F D L +V++RR+ F M + +WNS+I+ ++N
Sbjct: 291 MGFVTDIFL---DGSLIIMYSRFGWMVDARRV------FAFMKQKDIVSWNSLITGYVQN 341
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
++++AH + P + SWT+V+VG+ G + ++++FE M +D W +I
Sbjct: 342 NMIEDAHVLFKLMPERDAISWTSVVVGFANRGWMRESVELFEQMPVKDDIAWTAVISSFI 401
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
N +++F QM + G P+ A F+ +L+ + L L+ G Q HA A+ + +
Sbjct: 402 ANGNHVSVVRWFCQMSQEGCRPNTAAFSCLLSALASLAMLNQGLQAHAYAVNMGWIFDSA 461
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
V +++TMYA+CG + A FS + +++ NS+I A HG AE AL+LF RM+
Sbjct: 462 VHASLVTMYAKCGRLAEAHRVFSCIRNPSLVAINSMISAFAQHGLAEDALKLFNRMQYDG 521
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
+P+ +TF+G+L+AC+ AGLV QG YF+ M++ Y +QP HYTC+V+LLG G +DEA
Sbjct: 522 QRPNHVTFLGILTACARAGLVQQGYNYFESMRSVYGIQPNPDHYTCMVNLLGHAGFLDEA 581
Query: 492 MNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMY 551
+ ++N + P W ALL + +H+N+ + ++A +R++E++P ++ Y +LT M+
Sbjct: 582 LEMINSMPQKDY---PDAWAALLSSSSLHSNLDLAKLAAQRLLEIDPYDTTAYRVLTNMF 638
Query: 552 LSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
S G + D + + N K PG S I
Sbjct: 639 SSAGLKGDEEMVKVAQLSNMASKRPGYSLI 668
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 197/427 (46%), Gaps = 37/427 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R I A +FD M RD ++W+ M+ G K G + A LF MPER++ ++ +++
Sbjct: 176 LRAGEIDMALRVFDTMAARDVISWSSMVDGLCKYGTVSEARRLFEAMPERNVVSWTSMVR 235
Query: 61 GLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
G ++ + +F +G++V + +T + ++ G L+ E ++V M V
Sbjct: 236 GYVKCGMYREGLLLFLDMRREGVQV-NAITLSVVLDGCAQASLVGEGIQVHCLMTRMGFV 294
Query: 116 SWNLVIGALVNCQR----MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
+ + G+L+ M A F M +D+ SW ++ G V+ I +A LF M
Sbjct: 295 TDIFLDGSLIIMYSRFGWMVDARRVFAFMKQKDIVSWNSLITGYVQNNMIEDAHVLFKLM 354
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
P +D +W ++ G+ + G + + +LF++M +D +W +I+ + + + + +F
Sbjct: 355 PERDAISWTSVVVGFANRGWMRESVELFEQMPVKDDIAWTAVISSFIANGNHVSVVRWFC 414
Query: 232 QMP-ETCEK---TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW-------TNVIVGYF 280
QM E C ++ ++S L ++ + L+ + Y+ W +++ Y
Sbjct: 415 QMSQEGCRPNTAAFSCLLSALASLAMLNQG---LQAHAYAVNMGWIFDSAVHASLVTMYA 471
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G + A +VF + + N MI ++ L E+ LK F +M+ G P++ TF
Sbjct: 472 KCGRLAEAHRVFSCIRNPSLVAINSMISAFAQHGLAEDALKLFNRMQYDGQRPNHVTFLG 531
Query: 341 VLTICSDLPTLDLG-------RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+LT C+ + G R ++ I+ + +T M+ + G + AL
Sbjct: 532 ILTACARAGLVQQGYNYFESMRSVY--GIQPNPDHYT----CMVNLLGHAGFLDEALEMI 585
Query: 394 SSVPIHD 400
+S+P D
Sbjct: 586 NSMPQKD 592
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 131/311 (42%), Gaps = 26/311 (8%)
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE-NDLGEEGLKFFVQM 326
N A ++ Y G + A ++F+ M RDV W ++ E D L F
Sbjct: 38 NRAHLNALLTSYGRRGRIQDAQQLFDRMPRRDVISWTALLTAYAEGGDFASARLVF---- 93
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGN 385
+ P + ++ ++L++ L GR A A+ VS +IT AR G
Sbjct: 94 -DDMPRRNAVSWNALLSL-----YLGAGRPAAAHALFCKTPAKNAVSYGVIITGLARAGM 147
Query: 386 IQSALLEFSSVP--IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
++ A + +P + D + N++I G G + AL +F+ M D I++ ++
Sbjct: 148 LREAQAVYGEMPPRLRDPVGSNAMILGYLRAGEIDMALRVFDTMAARDV----ISWSSMV 203
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
G V + R F+ M + + +T +V + G+ E + L ++R +G+
Sbjct: 204 DGLCKYGTVSEARRLFEAMPERNVVS-----WTSMVRGYVKCGMYREGLLLFLDMRREGV 258
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAK 561
+V+ +L C + + G I +M + ++L L MY G DA+
Sbjct: 259 QVNAITLSVVLDGCAQASLVGEG-IQVHCLMTRMGFVTDIFLDGSLIIMYSRFGWMVDAR 317
Query: 562 RIFAQMKENGV 572
R+FA MK+ +
Sbjct: 318 RVFAFMKQKDI 328
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 201/621 (32%), Positives = 335/621 (53%), Gaps = 28/621 (4%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
+T N +I Y K G +D A LF++M ER++F++N++I +S + A +F+ M
Sbjct: 53 ETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP 112
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVNCQRMDLAE 134
D +WNSMISG+ +G DEAL F HG L + S+ + A Q + L
Sbjct: 113 QVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGF-LVNEYSFGSALSACAGLQDLKLGS 171
Query: 135 S----YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
++ DV + +V+ + GR+ A+ +FD+M + +WN +I Y NG
Sbjct: 172 QIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNG 231
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT---------W 241
V A +F +M + + + +V++ +AI +Q+ K
Sbjct: 232 PVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILG 291
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N+++ + + + EA + P ++ S T+++ GY + +V A +F M +DV
Sbjct: 292 NALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVI 351
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN +I G +N EE L F +K P + TF ++L C++L L LGRQ H+
Sbjct: 352 TWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHV 411
Query: 362 IKIA-RNQF-----TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+K R Q+ V N++I MY +CG++++ F + D +SWN++I G A +G
Sbjct: 412 LKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNG 471
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
+ KALE+F +M + PD +T +GVL ACS+AGL+D+GRYYF M ++ L P HY
Sbjct: 472 FGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHY 531
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
TC+VDLLGR G ++EA NL+ E+ ++ VWG+LL AC++H NI++GE ++++E
Sbjct: 532 TCMVDLLGRAGYLEEAKNLIEEM---SMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLE 588
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
++P NSG Y++L+ MY ++ R+ M++ GV K+PGCSWI+I +VF+ D
Sbjct: 589 VDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDK 648
Query: 596 SHPKFHRLRYLLNLLHTEIER 616
H + + +L + ++++
Sbjct: 649 RHARKKEIYMVLRTILQQMKQ 669
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 188/466 (40%), Gaps = 92/466 (19%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
+ R++ AQ++FD+M R V+WN +I Y +NG +D A+ +F +M E D T +
Sbjct: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLAS 257
Query: 58 VIAGLMQSDNVQGAKEVFDGM----EVR-DVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V++ ++ +++ + E R D++ N+++ Y I+EA +F MP++
Sbjct: 258 VVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIR 317
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
VVS ++ ++ +A F M +DV +W ++ G + G EA LF +
Sbjct: 318 SVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLK 377
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAE-DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
+ V + G L N C +A+ L ++ H L + F+
Sbjct: 378 RESVWPTHYTF-GNLLNACANLADLQLGRQAHSHVLKHGFR-----------------FQ 419
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
++ NS+I + ++ G V+ + + SW +IVGY
Sbjct: 420 YGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGY------------ 467
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
+N G + L+ F +M ESG +PD+ T VL CS L
Sbjct: 468 -------------------AQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLL 508
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
D GR Y R Q L+ P+ D + ++ L
Sbjct: 509 DEGR-----------------------YYFRSMTAQHGLM-----PLKD--HYTCMVDLL 538
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
GY E+A L E M + +PD I + +L+AC + G Y
Sbjct: 539 GRAGYLEEAKNLIEEMSM---QPDAIVWGSLLAACKVHRNIQLGEY 581
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 61/263 (23%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------- 48
+ ++++ A+ +F M +D +TWN +I G +NG + A+ LF +
Sbjct: 331 KASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGN 390
Query: 49 --------------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFD 76
+ D+F N++I M+ +V+ VF
Sbjct: 391 LLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQ 450
Query: 77 GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQR--- 129
M +D V+WN+MI GY NG ++AL VF M D V+ +IG L C
Sbjct: 451 HMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVT---MIGVLCACSHAGL 507
Query: 130 MDLAESYFKEMGARD-----VASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMI 183
+D YF+ M A+ +T MV+ L R G + EA+ L ++M + D W ++
Sbjct: 508 LDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLL 567
Query: 184 AGYLDNGCVGVAEDLFQKMHDRD 206
A + + + E + +K+ + D
Sbjct: 568 AACKVHRNIQLGEYVVKKLLEVD 590
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D++ F+ +L C+ + ++HA IK T + N +I +Y +CG + A F
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ +I SWNSIIC G+ + A+ +FE+M D CS+ ++
Sbjct: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVD-------------QCSWNSMIS 124
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+ GRF DEA+ ++ G V+ +G+
Sbjct: 125 GFEQH------------------------GRF---DEALVYFAQMHGHGFLVNEYSFGSA 157
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQM 567
L AC ++K+G V S VY+ L +MY CGR E A+ +F +M
Sbjct: 158 LSACAGLQDLKLGSQIHSLVYR-SNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEM 212
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 207/648 (31%), Positives = 332/648 (51%), Gaps = 61/648 (9%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV--RD 82
N +I Y K+ L+ A LF+++ E D T+++G S ++ A+ VF+ V RD
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFK 138
V +N+MI+G+ N A+ +F M + D ++ V+ L + F
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFH 172
Query: 139 EMGARDVASW-TIMVNGLVR--------EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
+ A + T + N LV + ARK+FD++ KD ++W M+ GY+ N
Sbjct: 173 AAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN 232
Query: 190 GCVGVAEDLFQKMHDR-DLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTW--- 241
G + E+L + M D L ++ +I+G VN A+ ++M E E T+
Sbjct: 233 GYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSV 292
Query: 242 -------------------------------NSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
NS++S+ + G EA + EK P ++
Sbjct: 293 IRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV 352
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
SW ++ GY G +G A +F+ M +++ W +MI GL EN GEEGLK F MK G
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
P + F+ + C+ L G+Q HAQ +KI + + NA+ITMYA+CG ++ A
Sbjct: 413 FEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEAR 472
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F ++P D +SWN++I L HG+ +A++++E M +PD IT + VL+ACS+AG
Sbjct: 473 QVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAG 532
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT-- 508
LVDQGR YFD M+ Y + P + HY ++DLL R G +A +++ + + PT
Sbjct: 533 LVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVI-----ESLPFKPTAE 587
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+W ALL CR+H N+++G IA +++ L P + G Y++L+ M+ + G+ E+ R+ M+
Sbjct: 588 IWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMR 647
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+ GVKKE CSWI++ H FL D+SHP+ + L L E+ R
Sbjct: 648 DRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRR 695
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 202/647 (31%), Positives = 335/647 (51%), Gaps = 34/647 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ +++A++LFD++PQRD V+W +I GY + A+ LF++M + + +
Sbjct: 60 VKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLL 119
Query: 61 GL-----------MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
L + N+ G V G+ V V ++++ Y+ G I + +VF M
Sbjct: 120 SLGLKTCGLGLNYLYGTNLHGF-SVKTGL-VNSVFVGSALLDMYMKIGEIGRSCKVFDEM 177
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMV-----NGLVREGR 160
P ++ V+W VI LV + +YF MG D ++ I + +G + GR
Sbjct: 178 PTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGR 237
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ + L A N + Y G + F+KM D+ SW ++ +
Sbjct: 238 SIHTQTLKKGFDENSFVA-NSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQM 296
Query: 221 RRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLVK---EAHSYLEKYPYSNIASWT 273
+ D + FK+M + E T++++IS +K + H+++ + N S
Sbjct: 297 GKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVA 356
Query: 274 NVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
N I+ Y + GE+ S KVF M RD+ W+ +I + GEE ++ +M+ GP
Sbjct: 357 NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P+ SVL++C + L+ G+Q+HA + + Q + V +A+I MYA+CG+I A
Sbjct: 417 PNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKI 476
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F DIISW ++I G A HG++++A+ELFE ++ +PD +TF+GVL+ACS+AG+V
Sbjct: 477 FMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMV 536
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
D G YYF+ M Y + P HY C++DLL R G + +A L IR+ I+ VW
Sbjct: 537 DLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETL---IRSMPIQWDDVVWST 593
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LL ACRIH ++ G+ A V++L+PN +G ++ L ++ + G+ ++A I MK GV
Sbjct: 594 LLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGV 653
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREIL 619
KEPG S +++ D F+SGD SHP+ + +L L + +E IL
Sbjct: 654 VKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGMEIYIL 700
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 164/425 (38%), Gaps = 102/425 (24%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD-- 299
N+ + +L++ +K+A ++ P + SWTN+I GY + A+++F M +
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 300 -----VTVWNVMIFGLGENDL--------------------GEEGLKFFVQMKESG---- 330
+ + GLG N L G L ++++ E G
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 331 -----PSPDNATFTSVLT-----------------------------------ICSDLPT 350
P+ + T+T+V+T +D
Sbjct: 173 VFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGA 232
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
L+ GR IH Q +K ++ + V+N++ TMY +CG + L F + D++SW +I+
Sbjct: 233 LNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTA 292
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-------------- 456
G + L+ F+RMR ++ P++ TF V+S C+ + G
Sbjct: 293 YIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNA 352
Query: 457 ---------YYFDCMK----NKYFLQPRSAH---YTCVVDLLGRFGLIDEAMNLLNEIRA 500
Y C + +K F + ++ ++ + G +EA L+ +R+
Sbjct: 353 LSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRS 412
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGRRED 559
+G + + ++L C ++ G+ V+ + S V L MY CG +
Sbjct: 413 EGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAE 472
Query: 560 AKRIF 564
A +IF
Sbjct: 473 ASKIF 477
>gi|357521583|ref|XP_003631080.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525102|gb|AET05556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 207/661 (31%), Positives = 329/661 (49%), Gaps = 67/661 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N R+ +A+NLFD MPQ+D V+WNVM+ GY ++G +D A +F+ MP +D ++N ++A
Sbjct: 90 VKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLA 149
Query: 61 GLMQSDNVQ-------------------------------GAKEVFDGMEVRDVVTWNSM 89
+Q+ ++ A+ +FD M VR+ ++WN+M
Sbjct: 150 VYVQNGRLEEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTM 209
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
ISGY +G + +A R+F P++DV +W ++ A V +D A F EM + ++
Sbjct: 210 ISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYN 269
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+M+ G V+ ++ AR+LF+ MP ++V +WN +I+GY NG + A +LF M RD S
Sbjct: 270 VMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVS 329
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPE----------TCEKTWNSIISVLIRNGLVKEAHS 259
W +I G + + + +M C + + ++ L+ L K+ H
Sbjct: 330 WAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALV---LGKQVHG 386
Query: 260 YLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
K Y N N ++ Y + G +G A VFE M +D+ WN M+ G + G +
Sbjct: 387 QAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQ 446
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI--KIARNQFTTVSNAM 376
L F MK +G PD T + I S+ +G ++ + T+ S
Sbjct: 447 ALLVFDSMKTAGFKPDEIT----MLIWSNNRLRKVGNTWVPTSLMNPLGNTWVTSTSVTE 502
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
R I S + F V I + + Y A LF L
Sbjct: 503 KQEERRVNRIGSVCITFLLVII-------------SAYKYRLHACHLFPCNWLLSLYLTC 549
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
I VGVL ACS+ GL D+G YF M Y + P S HY C++DLLGR GL++EA NL+
Sbjct: 550 IHNVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAHNLM- 608
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
R E WGALLGA RIH N ++GE A E V +EPNN+G+Y++L+ +Y + G+
Sbjct: 609 --RNMPFEPDAATWGALLGASRIHGNAELGEKAAEMVFNMEPNNAGMYVLLSNLYATLGK 666
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
D ++ +M++ G++K PG SW+++ + H F GD HP+ R+ L + +++
Sbjct: 667 WVDVGKLRLKMRQLGIQKIPGYSWVEVQNKIHKFTVGDCFHPEKDRIYAYLEEIDLKMKH 726
Query: 617 E 617
E
Sbjct: 727 E 727
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 246/441 (55%), Gaps = 3/441 (0%)
Query: 3 NARIQEAQNL-FDKMPQRDT--VTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVI 59
N R + N F RDT V I + +NG A+ +F+ MP +++F++N ++
Sbjct: 27 NLRGKHLHNFCFPVQKARDTYIVKCTNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLML 86
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
G +++ + A+ +FD M +D V+WN M+SGYV +G +DEA VF MP KD +SWN
Sbjct: 87 TGYVKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNG 146
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++ V R++ A F+ ++ SW ++ G V+ + +AR+LFD MP ++ +W
Sbjct: 147 LLAVYVQNGRLEEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISW 206
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N MI+GY +G + A LF++ RD+ +W ++ V S +D A F +MP E
Sbjct: 207 NTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREM 266
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+N +I+ ++ + A E P N+ SW +I GY + G++ A ++F++MT RD
Sbjct: 267 AYNVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRD 326
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
W +I G + E+ + V+MK G S + +TF L+ C+ + L LG+Q+H
Sbjct: 327 CVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHG 386
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
QA+K + V NA++ MY +CG+I A F + + DIISWN+++ G A HG+ +
Sbjct: 387 QAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQ 446
Query: 420 ALELFERMRLTDFKPDDITFV 440
AL +F+ M+ FKPD+IT +
Sbjct: 447 ALLVFDSMKTAGFKPDEITML 467
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 193/400 (48%), Gaps = 47/400 (11%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC 127
VQ A++ + +V + IS ++ NG ALRVF MP K++ SWNL++ V
Sbjct: 40 VQKARDTY-------IVKCTNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKN 92
Query: 128 QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
+R+ A + F M +D SW +M++G VR G + EA+ +FD MP KD +WN ++A Y+
Sbjct: 93 RRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYV 152
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
NG + A LF+ D +L SW L+ G V + + A F MP +WN++IS
Sbjct: 153 QNGRLEEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISG 212
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
R+G + +A E+ P ++ +WT ++ Y + G + A +VF+ M + +NVMI
Sbjct: 213 YARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYNVMI 272
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
G +VQ K+ +D+ R++ +A+ RN
Sbjct: 273 AG-------------YVQYKK----------------------MDMARELF-EAMP-CRN 295
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
N +I+ Y + G+I A F + D +SW +II G A G+ EK + + +M
Sbjct: 296 --VGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKM 353
Query: 428 RLTDFKPDDITFVGVLSACS-YAGLVDQGRYYFDCMKNKY 466
+ + TF LS C+ A LV + + +K Y
Sbjct: 354 KRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGY 393
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 192/435 (44%), Gaps = 51/435 (11%)
Query: 137 FKEMGARD--VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
F ARD + T ++ +R G A ++FD MP K++ +WNLM+ GY+ N +
Sbjct: 38 FPVQKARDTYIVKCTNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVD 97
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A +LF M +D SW +++G V S +D A F MP +WN +++V ++NG +
Sbjct: 98 ARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRL 157
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+EA E + SW ++ GY + +G A ++F+ M R+ WN MI G +
Sbjct: 158 EEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDG 217
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
+ + F E P D T+T+++ LD R++ + + N
Sbjct: 218 DLLQARRLF----EESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEM----PGKREMAYN 269
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
MI Y + + A F ++P ++ SWN+II G +G +A ELF+ M +
Sbjct: 270 VMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMT----QR 325
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
D +++ ++ AG G Y ++ M++
Sbjct: 326 DCVSWAAII-----AGYAQTGHY-------------------------------EKVMHM 349
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLS 553
L +++ DG ++ + + L C + +G ++ G+ V N V L EMY
Sbjct: 350 LVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCK 409
Query: 554 CGRREDAKRIFAQMK 568
CG +A +F +M+
Sbjct: 410 CGSIGEAYDVFERMQ 424
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 283/504 (56%), Gaps = 4/504 (0%)
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE-GRIVEARKLFDKM 171
+V++ N +I + V C +D A F++M + +W ++ ++ G AR+LF+K+
Sbjct: 40 NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
P + ++N+M+A + + V A F M +D+ SW +I+ L + A F
Sbjct: 100 PQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFS 159
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
MPE +W++++S + G + A P ++ +WT +I GY + G V A ++
Sbjct: 160 AMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERL 219
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F+ M+ R + WN MI G EN E+GL+ F M E+G P+ + TSVL CS+L L
Sbjct: 220 FQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSAL 279
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
LG+Q+H K + TT ++++MY++CG+++ A F +P D++ WN++I G
Sbjct: 280 QLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGY 339
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
A HG +KAL LF+ M+ KPD ITFV VL AC++AGLVD G YF+ M+ + ++ +
Sbjct: 340 AQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETK 399
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
HY C+VDLLGR G + EA++L I++ + P ++G LLGACRIH N+ + E A +
Sbjct: 400 PEHYACMVDLLGRAGKLSEAVDL---IKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAK 456
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
++EL+P + Y+ L +Y + R + I MK+N V K PG SWI+IN H F
Sbjct: 457 NLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFR 516
Query: 592 SGDSSHPKFHRLRYLLNLLHTEIE 615
S D HP+ + L L +++
Sbjct: 517 SSDRLHPELASIHEKLKDLEKKMK 540
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 196/392 (50%), Gaps = 18/392 (4%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSD-NVQGAKEVFDGM 78
+ + N +I Y + G +D+A+ +F M + T+N+++A + + + A+++F+ +
Sbjct: 40 NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFK 138
+ V++N M++ + + + +A F MPLKDV SWN +I AL M A F
Sbjct: 100 PQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFS 159
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
M ++ SW+ MV+G V G + A + F P + V W MI GY+ G V +AE L
Sbjct: 160 AMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERL 219
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN-SIISVLIRNG----- 252
FQ+M R L +W +I G V + R + + F+ M ET K S+ SVL+
Sbjct: 220 FQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSAL 279
Query: 253 -LVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
L K+ H + K P S+ + T+++ Y + G++ A ++F + +DV WN MI G
Sbjct: 280 QLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGY 339
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
++ G++ L+ F +MK+ G PD TF +VL C+ +DLG Q R F
Sbjct: 340 AQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLG----VQYFNTMRRDFG 395
Query: 371 TVSN-----AMITMYARCGNIQSALLEFSSVP 397
+ M+ + R G + A+ S+P
Sbjct: 396 IETKPEHYACMVDLLGRAGKLSEAVDLIKSMP 427
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 145/349 (41%), Gaps = 42/349 (12%)
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
+H++ ++ +N+ + +I Y G++ SA++VFE M + WN ++ +
Sbjct: 28 SSHTHQHEFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKK-- 85
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLT-------------ICSDLPTLDLGR---QIHA 359
++ Q+ E P P+ ++ +L +P D+ I A
Sbjct: 86 -PGHFEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISA 144
Query: 360 QA----IKIARNQFTTVS-------NAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
A + AR F+ + +AM++ Y CG++ +A+ F + P+ +I+W ++I
Sbjct: 145 LAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMI 204
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
G G E A LF+ M + +T+ +++ G + G F M +
Sbjct: 205 TGYMKFGRVELAERLFQEMSMRTL----VTWNAMIAGYVENGRAEDGLRLFRTMLET-GV 259
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
+P + T V LLG L A+ L ++ + P G + K G++
Sbjct: 260 KPNALSLTSV--LLGCSNL--SALQLGKQVH-QLVCKCPLSSDTTAGTSLVSMYSKCGDL 314
Query: 529 --AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
A E +++ + + + Y G + A R+F +MK+ G+K +
Sbjct: 315 KDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPD 363
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 202/647 (31%), Positives = 335/647 (51%), Gaps = 34/647 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ +++A++LFD++PQRD V+W +I GY + A+ LF++M + + +
Sbjct: 60 VKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLL 119
Query: 61 GL-----------MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
L + N+ G V G+ V V ++++ Y+ G I + +VF M
Sbjct: 120 SLGLKTCGLGLNYLYGTNLHGF-SVKXGL-VNSVFVGSALLDMYMKIGEIGRSCKVFDEM 177
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMV-----NGLVREGR 160
P ++ V+W VI LV + +YF MG D ++ I + +G + GR
Sbjct: 178 PTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGR 237
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ + L A N + Y G + F+KM D+ SW ++ +
Sbjct: 238 SIHTQTLKKGFDENSFVA-NSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQM 296
Query: 221 RRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLVK---EAHSYLEKYPYSNIASWT 273
+ D + FK+M + E T++++IS +K + H+++ + N S
Sbjct: 297 GKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVA 356
Query: 274 NVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
N I+ Y + GE+ S KVF M RD+ W+ +I + GEE ++ +M+ GP
Sbjct: 357 NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P+ SVL++C + L+ G+Q+HA + + Q + V +A+I MYA+CG+I A
Sbjct: 417 PNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKI 476
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F DIISW ++I G A HG++++A+ELFE ++ +PD +TF+GVL+ACS+AG+V
Sbjct: 477 FMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMV 536
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
D G YYF+ M Y + P HY C++DLL R G + +A L IR+ I+ VW
Sbjct: 537 DLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETL---IRSMPIQWDDVVWST 593
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LL ACRIH ++ G+ A V++L+PN +G ++ L ++ + G+ ++A I MK GV
Sbjct: 594 LLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGV 653
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREIL 619
KEPG S +++ D F+SGD SHP+ + +L L + +E IL
Sbjct: 654 VKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGMEIYIL 700
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 164/425 (38%), Gaps = 102/425 (24%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD-- 299
N+ + +L++ +K+A ++ P + SWTN+I GY + A+++F M +
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 300 -----VTVWNVMIFGLGENDL--------------------GEEGLKFFVQMKESG---- 330
+ + GLG N L G L ++++ E G
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 331 -----PSPDNATFTSVLT-----------------------------------ICSDLPT 350
P+ + T+T+V+T +D
Sbjct: 173 VFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGA 232
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
L+ GR IH Q +K ++ + V+N++ TMY +CG + L F + D++SW +I+
Sbjct: 233 LNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTA 292
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-------------- 456
G + L+ F+RMR ++ P++ TF V+S C+ + G
Sbjct: 293 YIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNA 352
Query: 457 ---------YYFDCMK----NKYFLQPRSAH---YTCVVDLLGRFGLIDEAMNLLNEIRA 500
Y C + +K F + ++ ++ + G +EA L+ +R+
Sbjct: 353 LSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRS 412
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGRRED 559
+G + + ++L C ++ G+ V+ + S V L MY CG +
Sbjct: 413 EGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAE 472
Query: 560 AKRIF 564
A +IF
Sbjct: 473 ASKIF 477
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 208/650 (32%), Positives = 331/650 (50%), Gaps = 87/650 (13%)
Query: 6 IQEAQNLFDKM----PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------- 48
+ EA+ +FD+ +R+ V+WN MI Y KN +A+ +F +M
Sbjct: 151 VDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSC 210
Query: 49 --------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
E+D+FT N ++ + +++ A VF+ M D
Sbjct: 211 VVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAAD 270
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYFK 138
VV+WN+ ISG V +G AL + M + +V + + V+ A +L
Sbjct: 271 VVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHG 330
Query: 139 EMGARDVASWTIMVN-GLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
M + VA + V GLV + G + +ARK+FD MP +D+ WN +I+G +G G
Sbjct: 331 FM-VKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHG 389
Query: 194 VAEDLFQKMHDR--DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN 251
LF +M DL + + ++ S AI + +Q+ EK
Sbjct: 390 EVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKI----------- 438
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
GL+ ++H +I Y++ G++ AIKVF+ + D+ M+ L
Sbjct: 439 GLLSDSHVI------------NGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALS 486
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+ D GE+ +K FVQM G PD+ +S+L C+ L + G+Q+HA IK QFT+
Sbjct: 487 QCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIK---RQFTS 543
Query: 372 ---VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
NA++ YA+CG+I+ A + FS +P I+SW+++I GLA HG+ ++AL+LF RM
Sbjct: 544 DVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRML 603
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
P+ IT VLSAC++AGLVD + YF+ MK + + HY C++D+LGR G +
Sbjct: 604 DEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKL 663
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
++AM L+N + + + VWGALLGA R+H + ++G +A E++ LEP SG +++L
Sbjct: 664 EDAMELVNNMP---FQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLA 720
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
Y S G ++ ++ MK++ VKKEP SW++I D H F+ GD SHP
Sbjct: 721 NTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHP 770
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 153/598 (25%), Positives = 264/598 (44%), Gaps = 49/598 (8%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ-SDN 67
A+ +FD++P V+W+ ++ Y NG +A+ F M R + + +++ + +
Sbjct: 56 ARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD 115
Query: 68 VQGAKEVF----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNL 119
V+ +V V DV N++++ Y G++DEA R+F ++ VSWN
Sbjct: 116 VRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNT 175
Query: 120 VIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKLFDKMP--- 172
+I A V + A F+EM G R + ++ +VN + R++ +
Sbjct: 176 MISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTG 235
Query: 173 -AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
KDV N ++ Y G + +A +F+KM D+ SW I+G V A+
Sbjct: 236 YEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLL 295
Query: 232 QMPETCEK----TWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTN-VIVGYFEM- 282
QM + T +S++ G L ++ H ++ K +A + V VG +M
Sbjct: 296 QMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVK----AVADFDEFVAVGLVDMY 351
Query: 283 ---GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD--NAT 337
G + A KVF+ M RD+ +WN +I G + E L F +M++ G D T
Sbjct: 352 AKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTT 411
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
SVL + + RQ+HA A KI + V N +I Y +CG + A+ F
Sbjct: 412 LASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESR 471
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
DIIS +++ L+ + E A++LF +M +PD +L+AC+ +QG+
Sbjct: 472 SDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQ 531
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ + F A +V + G I++A + + GI W A++G
Sbjct: 532 VHAHLIKRQFTSDVFAG-NALVYAYAKCGSIEDADMAFSGLPERGI----VSWSAMIGGL 586
Query: 518 RIHNNIKVGEIAGERVME--LEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKEN 570
H + K R+++ + PN ++ LT + +C G +DAK+ F MKE
Sbjct: 587 AQHGHGKRALDLFHRMLDEGVAPN----HITLTSVLSACNHAGLVDDAKKYFESMKET 640
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 71/184 (38%), Gaps = 14/184 (7%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T S L +L G +H+ +K SN ++T+Y+RC +A F +
Sbjct: 6 TIGSALARFGTSRSLFAGAHLHSHLLK--SGLLAGFSNHLLTLYSRCRLPSAARAVFDEI 63
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
P +SW+S++ + +G AL F MR ++ VL
Sbjct: 64 PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAP--------D 115
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLL----GRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
F + + R H V + L G FG++DEA + +E G E + W
Sbjct: 116 VRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNT 175
Query: 513 LLGA 516
++ A
Sbjct: 176 MISA 179
>gi|18481717|gb|AAL73539.1|AF466200_18 hypothetical protein S250_18C08.29 [Sorghum bicolor]
Length = 679
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/621 (30%), Positives = 328/621 (52%), Gaps = 44/621 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R RIQ+AQ LFD+MP RD ++W ++ Y G L +A +F+ MP R+ ++N +++
Sbjct: 53 RRGRIQDAQQLFDRMPHRDVISWTALLTAYADVGNLASARFVFDDMPLRNAASWNALVSL 112
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWNL 119
+++ A +F ++ V++ ++I+G G++ EA V+ MP +D V N
Sbjct: 113 YLRAGRPAAAHALFCKAPAKNAVSYGAIITGLARAGMLREAQAVYWEMPPRWRDPVGSNA 172
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
+I + + +A F M ARDV SW+ MV+GL + G + EAR+LF+ MP ++V +W
Sbjct: 173 MIWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEARRLFEAMPERNVVSW 232
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDA---------- 225
MI GY+ +G LF M ++ + +++G + +D
Sbjct: 233 TSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQASLVDEGSQVHCLMIR 292
Query: 226 -------------------------AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
A S F M + +WNS+I+ ++N ++++AH
Sbjct: 293 MGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSLITGYVQNDMIEDAHVL 352
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+ P + SWT+++VG+ G + ++++FE M +D W ++ L N +
Sbjct: 353 FKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWAAVMSSLVANGNYVSAV 412
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
++F QM + G P+ F+ +L+ + L L+ G Q HA A+ + + V +++TMY
Sbjct: 413 RWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGWIFDSAVHASLVTMY 472
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
A+CG + A FS + +I+ NS+I A HG AE A +LF RM+ +P+ +TF+
Sbjct: 473 AKCGRLAEAHRVFSCISHPSLIATNSMITAFAQHGLAEDAFKLFNRMQYDGQRPNHVTFL 532
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
G+L+AC+ AGLV G YF+ M++ Y +QP HYTC+VDLLGR G ++EA+ + N +
Sbjct: 533 GILTACARAGLVQHGYNYFESMRSVYGIQPNPDHYTCMVDLLGRAGFLNEALEMTNSMPQ 592
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
P W ALL + +H+N+ + ++A +R++E++P ++ Y +L+ M+ S G +ED
Sbjct: 593 KDY---PDAWKALLSSSSLHSNLDLAKLAAQRLLEIDPYDATAYTVLSNMFSSAGMKEDE 649
Query: 561 KRIFAQMKENGVKKEPGCSWI 581
+ + N K PG S I
Sbjct: 650 EMVKVAQLSNMASKSPGYSLI 670
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/532 (25%), Positives = 223/532 (41%), Gaps = 96/532 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTV 58
+R R A LF K P ++ V++ +I G + G L A ++ +MP RD N +
Sbjct: 114 LRAGRPAAAHALFCKAPAKNAVSYGAIITGLARAGMLREAQAVYWEMPPRWRDPVGSNAM 173
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
I G ++ + A VFDGM RDV++W++M+ G G + EA R+F MP ++VVSW
Sbjct: 174 IWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEARRLFEAMPERNVVSWT 233
Query: 119 LVI----------------------GALVN----------CQRMDLAES------YFKEM 140
+I G VN C + L + M
Sbjct: 234 SMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQASLVDEGSQVHCLMIRM 293
Query: 141 G-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
G A D+ ++ R G + +AR LF M KD+ +WN +I GY+ N + A LF
Sbjct: 294 GFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSLITGYVQNDMIEDAHVLF 353
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
+ M ++D SW ++ G N + ++ F+QMP E W +++S L+ NG A
Sbjct: 354 KLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWAAVMSSLVANGNYVSAVR 413
Query: 260 Y--------------------------------LEKYPYSNIASW-------TNVIVGYF 280
+ L+ + Y+ W +++ Y
Sbjct: 414 WFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGWIFDSAVHASLVTMYA 473
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G + A +VF ++ + N MI ++ L E+ K F +M+ G P++ TF
Sbjct: 474 KCGRLAEAHRVFSCISHPSLIATNSMITAFAQHGLAEDAFKLFNRMQYDGQRPNHVTFLG 533
Query: 341 VLTICSDLPTLDLG-------RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+LT C+ + G R ++ I+ + +T M+ + R G + AL
Sbjct: 534 ILTACARAGLVQHGYNYFESMRSVY--GIQPNPDHYTC----MVDLLGRAGFLNEALEMT 587
Query: 394 SSVPIHDII-SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+S+P D +W +++ + H + A RL + P D T VLS
Sbjct: 588 NSMPQKDYPDAWKALLSSSSLHSNLDLA--KLAAQRLLEIDPYDATAYTVLS 637
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 130/311 (41%), Gaps = 26/311 (8%)
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
N A ++ Y G + A ++F+ M RDV W ++ D+G FV
Sbjct: 40 NRAHLNALLTSYGRRGRIQDAQQLFDRMPHRDVISWTALLTAYA--DVGNLASARFV--F 95
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNI 386
+ P + A++ +++++ L GR A A+ VS A+IT AR G +
Sbjct: 96 DDMPLRNAASWNALVSL-----YLRAGRPAAAHALFCKAPAKNAVSYGAIITGLARAGML 150
Query: 387 QSALLEFSSVPI--HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+ A + +P D + N++I G G AL +F+ M D I++ ++
Sbjct: 151 REAQAVYWEMPPRWRDPVGSNAMIWGYLRGGELGMALRVFDGMAARDV----ISWSAMVD 206
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
G V + R F+ M + + +T ++ + G+ + + L ++R +G++
Sbjct: 207 GLCKYGTVSEARRLFEAMPERNVVS-----WTSMIRGYVKHGMYRDGLLLFLDMRREGVQ 261
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMEL---EPNNSGVYLILTEMYLSCGRREDAK 561
V+ +L C + + G ++ + E G LI+ MY G DA+
Sbjct: 262 VNMITLSVVLDGCAQASLVDEGSQVHCLMIRMGFAEDIFLGDSLII--MYSRFGSMADAR 319
Query: 562 RIFAQMKENGV 572
+F+ M + +
Sbjct: 320 SLFSFMNQKDI 330
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 209/652 (32%), Positives = 343/652 (52%), Gaps = 89/652 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYN 56
M+ ++ + +FD+M ++ V+W ++ GY +NG D + L NQM + FT+
Sbjct: 150 MKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFA 209
Query: 57 TVIAGL-----------------------------------MQSDNVQGAKEVFDGMEVR 81
TV+ L ++S+ V A+ VFD M VR
Sbjct: 210 TVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVR 269
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNC-QRMDLAESYFKE 139
D VTWN MI GY G E ++FH M L V +S + AL C Q+ +L ++ K+
Sbjct: 270 DSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQREL--NFTKQ 327
Query: 140 MG----------ARDVASWTIMVNGLVREGRIVEARKLFDKM-PAKDVQAWNLMIAGYLD 188
+ A+D+ T ++ + + EA KLF A +V W MI G++
Sbjct: 328 LHCGVVKNGYEFAQDIR--TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQ 385
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL 248
N A DLF +M R ++F T++++++
Sbjct: 386 NNNNKKAVDLFCQM------------------SREGVRPNHF---------TYSTVLAGK 418
Query: 249 IRNGLVKEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
+ L+ + H+ + K Y + S T ++ Y + G V + +VF + +D+ W+ M+
Sbjct: 419 -PSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAML 477
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC-SDLPTLDLGRQIHAQAIKIAR 366
GL + E+ ++ F+Q+ + G P+ TF+SV+ C S T++ G+QIHA A+K +
Sbjct: 478 TGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGK 537
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+ VS+A++TMY++ GNI+SA F+ DI+SWNS+I G HG A+KALE+F+
Sbjct: 538 SNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQI 597
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
M+ DD+TF+GVL+AC++AGLV++G YF+ M Y + + HY+C+VDL R G
Sbjct: 598 MQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAG 657
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
+ D+AM+++N + SPT+W LL ACR+H N+++G++A E+++ L+PN++ Y++
Sbjct: 658 MFDKAMDIINGMP---FPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVL 714
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
L+ ++ G E+ + M E VKKE GCSWI+I + FL+GD SHP
Sbjct: 715 LSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHP 766
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 210/511 (41%), Gaps = 92/511 (18%)
Query: 34 NGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGY 93
NG L +++ F Y+ + + + A ++FD ++D+ +N ++ +
Sbjct: 20 NGRLQSSIHHIKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDF 79
Query: 94 VCNGLIDEALRVFH----------GMPLKDV-----VSWNLVIGALVNCQRM-------- 130
N EAL +F G+ L V ++ V+G V+CQ +
Sbjct: 80 SRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDV 139
Query: 131 ----DLAESY------------FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
L + Y F EMG ++V SWT +++G R G E L ++M +
Sbjct: 140 SVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQME 199
Query: 175 DVQ---------------------------------------AWNLMIAGYLDNGCVGVA 195
V N +I YL + VG A
Sbjct: 200 GVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDA 259
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR----- 250
E +F M RD +W +I G F +M K ++ ++
Sbjct: 260 EAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQ 319
Query: 251 --NGLVKEAHSYLEKYPYSNIASW-TNVIVGYFEMGEVGSAIKVFELM-TTRDVTVWNVM 306
K+ H + K Y T ++V Y + V A K+F + +V W M
Sbjct: 320 RELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAM 379
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
I G +N+ ++ + F QM G P++ T+++VL + P+ L Q+HAQ IK
Sbjct: 380 IGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL---AGKPS-SLLSQLHAQIIKAYY 435
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+ +V+ A++ Y + GN+ + F S+P DI++W++++ GLA +EKA+E+F +
Sbjct: 436 EKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQ 495
Query: 427 MRLTDFKPDDITFVGVLSAC-SYAGLVDQGR 456
+ KP++ TF V++AC S A V+ G+
Sbjct: 496 LVKEGVKPNEYTFSSVINACSSSAATVEHGK 526
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 161/363 (44%), Gaps = 31/363 (8%)
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
A +LFD+ P KD+ +N ++ + N A LF+ +H L ++GL S +
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLG-----VDGLTLSCAL 111
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMG 283
+ C ++ ++ + +K +LE +++ T+++ Y +
Sbjct: 112 -----------KVCGVLFDQVVGRQVHCQSLKSG--FLE-----DVSVGTSLVDMYMKTE 153
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
+ +F+ M ++V W ++ G N L +E + QM+ G +P+ TF +VL
Sbjct: 154 DFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLG 213
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
+D ++ G Q+HA +K T V NA+I MY + + A F S+ + D ++
Sbjct: 214 ALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVT 273
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD-QGRYYFDCM 462
WN +I G A G+ + ++F RMRL K F L CS ++ + + +
Sbjct: 274 WNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVV 333
Query: 463 KNKY-FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
KN Y F Q T ++ + +DEA L + AD + W A++G +N
Sbjct: 334 KNGYEFAQDIR---TALMVTYSKCSSVDEAFKLFS--MADAAH-NVVTWTAMIGGFVQNN 387
Query: 522 NIK 524
N K
Sbjct: 388 NNK 390
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/516 (36%), Positives = 283/516 (54%), Gaps = 36/516 (6%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA 146
N +I+ V +G ID ALRVFHGM K+ +
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTI------------------------------- 93
Query: 147 SWTIMVNGLVRE-GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
+W ++ G+ ++ R++EA +LFD++P D ++N+M++ Y+ N A+ F +M +
Sbjct: 94 TWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK 153
Query: 206 DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
D SW +I G ++ A F M E E +WN++IS I G +++A + + P
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAP 213
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELMTT-RDVTVWNVMIFGLGENDLGEEGLKFFV 324
+ +WT +I GY + +V A +F+ MT +++ WN MI G EN E+GLK F
Sbjct: 214 VRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFR 273
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
M E G P+++ +S L CS+L L LGRQIH K T ++I+MY +CG
Sbjct: 274 AMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCG 333
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+ A F + D+++WN++I G A HG A+KAL LF M +PD ITFV VL
Sbjct: 334 ELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLL 393
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
AC++AGLV+ G YF+ M Y ++P+ HYTC+VDLLGR G ++EA+ L IR+
Sbjct: 394 ACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKL---IRSMPFR 450
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
V+G LLGACR+H N+++ E A E++++L N+ Y+ L +Y S R ED R+
Sbjct: 451 PHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVR 510
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
+MKE+ V K PG SWI+I + H F S D HP+
Sbjct: 511 KRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPEL 546
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 204/405 (50%), Gaps = 36/405 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN-GFLDNAMCLFNQMPERDMFTYNTVI 59
+R+ I A +F M ++T+TWN ++ G K+ + A LF+++PE D F+YN ++
Sbjct: 72 VRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIML 131
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+ +++ N + A+ FD M +D +WN+MI+GY G +++A +F+ M K+ VSWN
Sbjct: 132 SCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNA 191
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA-KDVQA 178
+I + C ++ A +FK R V +WT M+ G ++ ++ A +F M K++
Sbjct: 192 MISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 251
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
WN MI+GY++N LF+ M + + NS + +A+ C
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRP---------NSSGLSSALL-------GC- 294
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYSN-IASWTNVIVGYFEMGEVGSAIKVFELMTT 297
S +S L L ++ H + K N + + T++I Y + GE+G A K+FE+M
Sbjct: 295 ----SELSAL---QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK 347
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG--- 354
+DV WN MI G ++ ++ L F +M ++ PD TF +VL C+ +++G
Sbjct: 348 KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAY 407
Query: 355 --RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+ ++ + +T M+ + R G ++ AL S+P
Sbjct: 408 FESMVRDYKVEPQPDHYT----CMVDLLGRAGKLEEALKLIRSMP 448
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 180/392 (45%), Gaps = 67/392 (17%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+R+ EA LFD++P+ DT ++N+M+ Y +N + A F++MP +D ++NT+I G
Sbjct: 107 SRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYA 166
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
+ ++ A+E+F M ++ V+WN+MISGY+ G +++A F P++ VV+W +I
Sbjct: 167 RRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITG 226
Query: 124 LVNCQRMDLAESYFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAK-------- 174
+ ++++LAE+ FK+M +++ +W M++G V R + KLF M +
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 175 -------------------------------DVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
DV A +I+ Y G +G A LF+ M
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKTWNSIISVLIRNGLVKEAHSYLE 262
+D+ +W +I+G D A+ F++M + W + ++VL+
Sbjct: 347 KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLL------------- 393
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
N A N+ + YFE S ++ +++ D + M+ LG EE LK
Sbjct: 394 ---ACNHAGLVNIGMAYFE-----SMVRDYKVEPQPD--HYTCMVDLLGRAGKLEEALKL 443
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
M P A F ++L C ++L
Sbjct: 444 IRSMPF---RPHAAVFGTLLGACRVHKNVELA 472
>gi|357114699|ref|XP_003559133.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 640
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/521 (33%), Positives = 284/521 (54%), Gaps = 6/521 (1%)
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASW 148
M++GY G + A R+F GM + VV+W ++ A R+ A F M R V SW
Sbjct: 106 MLAGYAKAGRVHRARRLFDGMLTRGVVAWTCMVDAYCRAGRVSEARELFDAMPERSVVSW 165
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
T M++G R G EAR++FD+MP ++V +W +M+ Y D G A LF +M R+
Sbjct: 166 TAMMHGYARAGMPREAREMFDRMPERNVVSWTVMVKAYADGGYFQDAMGLFDRMPQRNSY 225
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
SW +I+G + R+D A+ F++MP +W ++++ L +NG V A + + P +
Sbjct: 226 SWNAVISGSFRAGRVDEAVRLFERMPHRNVVSWTAMVTGLAQNGRVSMAREFFDVMPCKD 285
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
I +W +I Y GE+ A ++F+ M +D+ WN +I G + +L +E F+ M
Sbjct: 286 ITAWNAMITAYANNGEMNEARRLFDSMPAKDLVSWNTVIDGYAKKELKDEASGLFLDMLR 345
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
S SP++ T SVL I + + QIH A + T++ NA++TMY+R G++ S
Sbjct: 346 SAASPNSTTLISVLVISESMVEV---VQIHGLATTLGLLSETSLGNALLTMYSRIGDLPS 402
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A L F + D I+W S+I A HG+A AL+ F +M P TF VLSACS+
Sbjct: 403 AWLAFKRLEEKDAITWTSMIQAFANHGHASYALQAFAQMLEHGKNPSSTTFTAVLSACSH 462
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
AGLV++G+ F +++ Y L+ HYTC++D+LGR G + EAM+++N + D +
Sbjct: 463 AGLVEEGKSVFRSIRHVYGLERTIEHYTCLIDILGRAGNMREAMDVVNAMPPDICD--DA 520
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNS-GVYLILTEMYLSCGRREDAKRIFAQM 567
+ LLGAC +H + GE + + +P+ S G Y++L + S G ++ ++ M
Sbjct: 521 ILRTLLGACMMHKEVDAAREVGEVLAKSDPSGSGGYYMVLANVLASGGLWDEMADVWKAM 580
Query: 568 KENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
K + V+K PG S I ++ H F S D HP+ + +L+
Sbjct: 581 KGSNVRKTPGVSQITVDARNHAFFSRDQIHPQCAEIYEMLD 621
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 147/518 (28%), Positives = 233/518 (44%), Gaps = 48/518 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ R+ A+ LFD M R V W M+ Y + G + A LF+ MPER + ++ ++ G
Sbjct: 112 KAGRVHRARRLFDGMLTRGVVAWTCMVDAYCRAGRVSEARELFDAMPERSVVSWTAMMHG 171
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
++ + A+E+FD M R+VV+W M+ Y G +A+ +F MP ++ SWN VI
Sbjct: 172 YARAGMPREAREMFDRMPERNVVSWTVMVKAYADGGYFQDAMGLFDRMPQRNSYSWNAVI 231
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
R+D A F+ M R+V SWT MV GL + GR+ AR+ FD MP KD+ AWN
Sbjct: 232 SGSFRAGRVDEAVRLFERMPHRNVVSWTAMVTGLAQNGRVSMAREFFDVMPCKDITAWNA 291
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKT 240
MI Y +NG + A LF M +DL SW +I+G D A F M +
Sbjct: 292 MITAYANNGEMNEARRLFDSMPAKDLVSWNTVIDGYAKKELKDEASGLFLDMLRSAASPN 351
Query: 241 WNSIISVL-IRNGLVK--EAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMT 296
++ISVL I +V+ + H + S N ++ Y +G++ SA F+ +
Sbjct: 352 STTLISVLVISESMVEVVQIHGLATTLGLLSETSLGNALLTMYSRIGDLPSAWLAFKRLE 411
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+D W MI + L+ F QM E G +P + TFT+VL+ CS ++ G+
Sbjct: 412 EKDAITWTSMIQAFANHGHASYALQAFAQMLEHGKNPSSTTFTAVLSACSHAGLVEEGKS 471
Query: 357 I-----HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
+ H ++ +T +I + R GN++ A+ +++P IC
Sbjct: 472 VFRSIRHVYGLERTIEHYT----CLIDILGRAGNMREAMDVVNAMPPD--------IC-- 517
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
DD +L AC VD R + + K
Sbjct: 518 -----------------------DDAILRTLLGACMMHKEVDAAREVGEVLA-KSDPSGS 553
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
+Y + ++L GL DE ++ ++ + +P V
Sbjct: 554 GGYYMVLANVLASGGLWDEMADVWKAMKGSNVRKTPGV 591
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 212/733 (28%), Positives = 354/733 (48%), Gaps = 129/733 (17%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFT-------- 54
A+ +FD M ++D +WN+++ GY ++G + A L QM P++ F
Sbjct: 164 AKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACAD 223
Query: 55 ----------YNTVIAGLMQSD---------------NVQGAKEVFDGMEVRDVVTWNSM 89
YN ++ +D ++ A +VFD + RD+VTW SM
Sbjct: 224 ARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSM 283
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDV--------------------------------VSW 117
I+G +G +A +F M + V V W
Sbjct: 284 ITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGW 343
Query: 118 NL-------VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+ ++ C M+ A F + R+V SWT M+ G + GRI EA F+K
Sbjct: 344 DTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNK 403
Query: 171 M---------------------PA------------------KDVQAWNLMIAGYLDNGC 191
M P+ D + +++ Y G
Sbjct: 404 MIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGS 463
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISV 247
+ A +F+K+ +++ +W +I V + D A++ F+ + + K T+ SI++V
Sbjct: 464 LKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNV 523
Query: 248 LIRNG---LVKEAHSYLEKYPYSNIASWTNVIVGYF-EMGEVGSAIKVFELMTTRDVTVW 303
+ L K H + K + +N +V F G++ SA +F M RD+ W
Sbjct: 524 CKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSW 583
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
N +I G ++ + +F M+ESG PD TFT +L C+ L GR++HA +
Sbjct: 584 NTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITE 643
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
A + V +I+MY +CG+I+ A F +P ++ SW S+I G A HG ++ALEL
Sbjct: 644 AAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALEL 703
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
F +M+ KPD ITFVG LSAC++AGL+++G ++F MK ++ ++PR HY C+VDL G
Sbjct: 704 FYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFG 762
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGV 543
R GL++EA+ + +++ +E VWGALLGAC++H N+++ E A ++ +EL+PN++GV
Sbjct: 763 RAGLLNEAVEFIIKMQ---VEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGV 819
Query: 544 YLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL 603
++IL+ +Y + G ++ ++ M + GV K+PG SWI+++ H F S D +HP+ +
Sbjct: 820 FVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEI 879
Query: 604 RYLLNLLHTEIER 616
L LH E+ +
Sbjct: 880 HAELERLHMEMRQ 892
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/507 (22%), Positives = 233/507 (45%), Gaps = 49/507 (9%)
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVEARK 166
+KD N V+ L + + A + + + + +++ ++ ++ + + +
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 167 LFDKMPAKDVQA----WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+++ + VQ N +I Y G A+ +F M ++D+ SW L+ G V
Sbjct: 132 IYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 223 IDAAISYFKQM-PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW-TNVIVG-- 278
+ A +QM ++ + + +S+L + E Y A W T++ VG
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTA 251
Query: 279 ----YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+ + G++G A KVF+ + TRD+ W MI GL + ++ F +M+E G PD
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPD 311
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
F S+L C+ L+ G+++HA+ ++ + V A+++MY +CG+++ AL F
Sbjct: 312 KVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFD 371
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
V +++SW ++I G A HG ++A F +M + +P+ +TF+ +L ACS + +
Sbjct: 372 LVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKR 431
Query: 455 GRYYFD-CMKNKYFLQPR------SAHYTC--------VVDLLGRFGLI----------- 488
G+ D ++ Y R S + C V + + + ++
Sbjct: 432 GQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQ 491
Query: 489 ----DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEPNNSG 542
D A+ + +GI+ + + + ++L C+ +++++G+ +M+ LE ++
Sbjct: 492 HEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLE-SDLH 550
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKE 569
V L M+++CG AK +F M +
Sbjct: 551 VSNALVSMFVNCGDLMSAKNLFNDMPK 577
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 132/307 (42%), Gaps = 33/307 (10%)
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
+D N ++ L + E ++ ++ S T++++L +C L G +I
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
+ K + N +I MYA+CGN SA F + D+ SWN ++ G HG
Sbjct: 133 YNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM--------------- 462
E+A +L E+M KPD TFV +L+AC+ A VD+GR ++ +
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252
Query: 463 ------------KNKYF--LQPRS-AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
K F L R +T ++ L R G +A NL + +G++
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFA 565
+ +LL AC ++ G+ R+ E+ + +Y+ + MY CG EDA +F
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE-IYVGTAILSMYTKCGSMEDALEVFD 371
Query: 566 QMKENGV 572
+K V
Sbjct: 372 LVKGRNV 378
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 203/644 (31%), Positives = 339/644 (52%), Gaps = 36/644 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM---PERDMFTYNT 57
++ + A+ LFDKM QRD ++W +I GY A+ LF++M P M +
Sbjct: 12 VKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFIL 71
Query: 58 VIA----GLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHG 108
+A GL S + E G V+ V ++++ Y+ G +DE VF
Sbjct: 72 SLALKACGLNMSVSF---GESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKE 128
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVN---------GLVREG 159
MPL++VVSW +I LV A +YF +M + V T + G + G
Sbjct: 129 MPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYG 188
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
R + + L A A N + Y G + LF+ M RD+ SW +I V
Sbjct: 189 REIHCQTLKKGFTAVSFVA-NTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQ 247
Query: 220 SRRIDAAISYFKQMPET----CEKTWNSIISVLIRNGLVK---EAHSYLEKYPYSNIASW 272
+ + A+ F++M ET E T+ ++IS G ++ + H+++ + + S
Sbjct: 248 IGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSV 307
Query: 273 TNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
N I+ Y + ++ A VF+ ++ RD+ W+ MI G + GEE + M+ GP
Sbjct: 308 ANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGP 367
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
P+ F SVL++C ++ L+ G+Q+HA + + Q T V +A+I MY++CG+I+ A
Sbjct: 368 RPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASK 427
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F ++I+SW ++I G A HGY+++A++LF+++ +PD +TF+ VL+ACS+AGL
Sbjct: 428 IFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGL 487
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
VD G +YF+ + + + P HY C++DLL R G +++A ++ I++ + VW
Sbjct: 488 VDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESM---IQSMPFQRDDVVWS 544
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
LL ACRIH ++ G+ A E++++L+PN + ++ L MY + G+ ++A + MK G
Sbjct: 545 TLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKG 604
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
V KEPG SWI+ D F+SGD SHP+ + +L+LL ++ E
Sbjct: 605 VVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQAE 648
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 201/451 (44%), Gaps = 45/451 (9%)
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-P 234
+Q NL++ + G + A LF KM RD SW +I+G VN A+S F +M
Sbjct: 1 MQEINLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWV 60
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEK-YPYSNIASWTN-VIVG------YFEMGEVG 286
E I+S+ ++ + + S+ E + YS + N V VG Y ++G+V
Sbjct: 61 EPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVD 120
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
VF+ M R+V W +I GL +E L +F M D TF+S L C+
Sbjct: 121 EGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACA 180
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
D L+ GR+IH Q +K + V+N + TMY +CG + L F S+ D++SW +
Sbjct: 181 DSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTT 240
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR---------- 456
II G E A++ F RMR TD P++ TF V+S C+ G ++ G
Sbjct: 241 IIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRG 300
Query: 457 -------------YYFDC----MKNKYF--LQPRS-AHYTCVVDLLGRFGLIDEAMNLLN 496
Y C + + F L R ++ ++ + G +EA + L+
Sbjct: 301 LVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLS 360
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCG 555
+R +G + + ++L C ++ G+ V+ + N+ V L MY CG
Sbjct: 361 WMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCG 420
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
++A +IF + + N + SW + +G
Sbjct: 421 SIKEASKIFDEAEYNNI-----VSWTAMING 446
>gi|302767812|ref|XP_002967326.1| hypothetical protein SELMODRAFT_30579 [Selaginella moellendorffii]
gi|300165317|gb|EFJ31925.1| hypothetical protein SELMODRAFT_30579 [Selaginella moellendorffii]
Length = 569
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/558 (31%), Positives = 296/558 (53%), Gaps = 7/558 (1%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N +Q AQ +F +MP R+ V+WN +I G + A +F+ MP+R++ ++ ++A
Sbjct: 14 QNGNLQVAQAMFFRMPARNFVSWNAIIDGCAQGQDEALAKKVFDSMPQREVVSWTAMVAT 73
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
QS ++ A+ + M ++V+WN MI + N L+++A F P D VSWN +I
Sbjct: 74 YSQSGRLEEARALLSKMPALNIVSWNVMIQAFADNLLVEDAKERFDRAPEHDFVSWNAII 133
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGR--IVEARKLFDKMPAKDVQAW 179
A ++ LA + F M RDV SW M+ +EG+ + +A+++FD+ P ++V +W
Sbjct: 134 TAYAQTSQIFLARAAFDRMPQRDVVSWATMIQSYAQEGQPSMDQAKEIFDRAPQRNVVSW 193
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N+MI GY +G + A+ +F M +D+ SW L+ G + ++++ A F +MP T
Sbjct: 194 NVMITGYSASGRIKQAKAVFDTMPQKDVISWAALVAGYLQNQQLAEAKRVFDRMPATNAV 253
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
N++++ + E S ++ P +ASW+ ++ GY + G SA F+ M RD
Sbjct: 254 CCNTVMASFAGADRMPETRSLFDRMPERTLASWSTMLGGYAQSGHTASAKSFFDRMPQRD 313
Query: 300 --VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
+ WN +I G +N L E L+ F++M G SPD A++ S L C+ L +L R I
Sbjct: 314 HDLVSWNALIAGHLDNGLDERALQLFLEMDRRGCSPDPASYASALAACAGLASLGAARDI 373
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H + K V NA++ Y + G + A L F S+ D+++WN++ G + G
Sbjct: 374 HWRLCKAGLETDAFVHNALVDFYGKSGRMADAELVFQSLASVDVVTWNALAAGFSRQGSY 433
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
++L ++ +PD ITF+ +L+A +AGLVD GR F M Y ++ HY C
Sbjct: 434 RLVVDLLWAIKDQGLEPDGITFLALLAAYGHAGLVDHGRRAFAAMVESYRIEAGIEHYHC 493
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
+VD+LGR ++EA L E+ A S W +L C N+ V +A E ++ ++
Sbjct: 494 LVDMLGRANRLEEA---LAEVAAMPHRPSSVTWTTVLSTCVKWKNLDVASVAFESLLGID 550
Query: 538 PNNSGVYLILTEMYLSCG 555
P+ Y+++ +Y S G
Sbjct: 551 PDGPAAYVLMANVYGSAG 568
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 149/313 (47%), Gaps = 20/313 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N ++ EA+ +FD+MP + V N ++ + + LF++MPER + +++T++
Sbjct: 232 LQNQQLAEAKRVFDRMPATNAVCCNTVMASFAGADRMPETRSLFDRMPERTLASWSTMLG 291
Query: 61 GLMQSDNVQGAKEVFDGMEVR--DVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DV 114
G QS + AK FD M R D+V+WN++I+G++ NGL + AL++F M + D
Sbjct: 292 GYAQSGHTASAKSFFDRMPQRDHDLVSWNALIAGHLDNGLDERALQLFLEMDRRGCSPDP 351
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDK 170
S+ + A + A + + + + N LV + GR+ +A +F
Sbjct: 352 ASYASALAACAGLASLGAARDIHWRLCKAGLETDAFVHNALVDFYGKSGRMADAELVFQS 411
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAA 226
+ + DV WN + AG+ G + DL + D+ L ++ L+ ++ +D
Sbjct: 412 LASVDVVTWNALAAGFSRQGSYRLVVDLLWAIKDQGLEPDGITFLALLAAYGHAGLVDHG 471
Query: 227 ISYFKQMPETCE-----KTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYF 280
F M E+ + ++ ++ +L R ++EA + + P+ + +WT V+
Sbjct: 472 RRAFAAMVESYRIEAGIEHYHCLVDMLGRANRLEEALAEVAAMPHRPSSVTWTTVLSTCV 531
Query: 281 EMGEVGSAIKVFE 293
+ + A FE
Sbjct: 532 KWKNLDVASVAFE 544
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
NAMIT YA+ GN+Q A F +P + +SWN+II G A A ++F+ M +
Sbjct: 6 NAMITAYAQNGNLQVAQAMFFRMPARNFVSWNAIIDGCAQGQDEALAKKVFDSMPQREV- 64
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCM 462
+++ +++ S +G +++ R M
Sbjct: 65 ---VSWTAMVATYSQSGRLEEARALLSKM 90
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 222/678 (32%), Positives = 335/678 (49%), Gaps = 80/678 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + AQ LFD+M R+ VTW +I GY +NG D A F M +
Sbjct: 145 VRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFG 204
Query: 61 GLMQSDNVQGAKEVFDGMEVR----------DVVTWNSMISGY-VCNGLIDEALRVFHGM 109
+++ G G+++ DVV N +IS Y C ++A VF G+
Sbjct: 205 SALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGI 264
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESY--------------------FKEMG-------- 141
+++ +SWN +I V +R D +Y F E
Sbjct: 265 GIRNSISWNSIIS--VYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRK 322
Query: 142 ARDVASWTIMV----------NGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
R+V + I NGLV + G I +A +F+ M KD +WN +I+G
Sbjct: 323 GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLD 382
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR-RIDAAISYFKQMPETCEKTWN---- 242
N C A ++F M + D SW +I L +S + A+ YF QM W
Sbjct: 383 QNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQM---MRGGWGLSRV 439
Query: 243 ------SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELM 295
S +S L + + + H+ + KY S+ + N ++ Y + GE+ K+F M
Sbjct: 440 TFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARM 499
Query: 296 T-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+ TRD WN MI G N+L + + M + G D+ TF ++L+ C+ + TL+ G
Sbjct: 500 SETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERG 559
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
++HA I+ V +A++ MY++CG I A F +P+ ++ SWNS+I G A H
Sbjct: 560 MEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARH 619
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
G+ EKAL+LF RM L PD +TFVGVLSACS+ G V++G +F M Y L PR H
Sbjct: 620 GHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEH 679
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN--NIKVGEIAGER 532
++C+VDLLGR G +DE + +N + ++ + +W +LGAC N N ++G A E
Sbjct: 680 FSCMVDLLGRAGKLDEVGDFINSM---PMKPNVLIWRTVLGACCRANGRNTELGRRAAEM 736
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLS 592
++ELEP N+ Y++L MY S + ED + MKE VKKE GCSW+ + DG HVF++
Sbjct: 737 LLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVA 796
Query: 593 GDSSHPK----FHRLRYL 606
GD HP+ + +LR L
Sbjct: 797 GDKLHPEKDLIYDKLREL 814
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+E H KY + +N ++ Y +G++GSA K+F+ M+ R++ W +I G +
Sbjct: 118 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 177
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC--SDLPTLDLGRQIHAQAIKIARNQFT 370
N +E F M +G P++ F S L C S LG QIH K
Sbjct: 178 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 237
Query: 371 TVSNAMITMYARC-GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
V N +I+MY C + A F + I + ISWNSII + G A A +LF M+
Sbjct: 238 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 297
Query: 430 T----DFKPDD 436
FKP+D
Sbjct: 298 EGLGFSFKPND 308
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
TF S++ + R++H Q+IK +SN +I +Y R G++ SA F +
Sbjct: 101 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
++++W +I G +G ++A F M F P+ F L AC +G
Sbjct: 161 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 214
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 209/652 (32%), Positives = 343/652 (52%), Gaps = 89/652 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYN 56
M+ ++ + +FD+M ++ V+W ++ GY +NG D + L NQM + FT+
Sbjct: 150 MKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFA 209
Query: 57 TVIAGL-----------------------------------MQSDNVQGAKEVFDGMEVR 81
TV+ L ++S+ V A+ VFD M VR
Sbjct: 210 TVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVR 269
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNC-QRMDLAESYFKE 139
D VTWN MI GY G E ++FH M L V +S + AL C Q+ +L ++ K+
Sbjct: 270 DSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQREL--NFTKQ 327
Query: 140 MG----------ARDVASWTIMVNGLVREGRIVEARKLFDKM-PAKDVQAWNLMIAGYLD 188
+ A+D+ T ++ + + EA KLF A +V W MI G++
Sbjct: 328 LHCGVVKNGYEFAQDIR--TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQ 385
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL 248
N A DLF +M R ++F T++++++
Sbjct: 386 NNNNEKAVDLFCQM------------------SREGVRPNHF---------TYSTVLAGK 418
Query: 249 IRNGLVKEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
+ L+ + H+ + K Y + S T ++ Y + G V + +VF + +D+ W+ M+
Sbjct: 419 -PSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAML 477
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC-SDLPTLDLGRQIHAQAIKIAR 366
GL + E+ ++ F+Q+ + G P+ TF+SV+ C S T++ G+QIHA A+K +
Sbjct: 478 TGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGK 537
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+ VS+A++TMY++ GNI+SA F+ DI+SWNS+I G HG A+KALE+F+
Sbjct: 538 SNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQI 597
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
M+ DD+TF+GVL+AC++AGLV++G YF+ M Y + + HY+C+VDL R G
Sbjct: 598 MQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAG 657
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
+ D+AM+++N + SPT+W LL ACR+H N+++G++A E+++ L+PN++ Y++
Sbjct: 658 MFDKAMDIINGMP---FPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVL 714
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
L+ ++ G E+ + M E VKKE GCSWI+I + FL+GD SHP
Sbjct: 715 LSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHP 766
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 210/511 (41%), Gaps = 92/511 (18%)
Query: 34 NGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGY 93
NG L +++ F Y+ + + + A ++FD ++D+ +N ++ +
Sbjct: 20 NGRLQSSIHHIKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDF 79
Query: 94 VCNGLIDEALRVFH----------GMPLKDV-----VSWNLVIGALVNCQRM-------- 130
N EAL +F G+ L V ++ V+G V+CQ +
Sbjct: 80 SRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDV 139
Query: 131 ----DLAESY------------FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
L + Y F EMG ++V SWT +++G R G E L ++M +
Sbjct: 140 SVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQME 199
Query: 175 DVQ---------------------------------------AWNLMIAGYLDNGCVGVA 195
V N +I YL + VG A
Sbjct: 200 GVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDA 259
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR----- 250
E +F M RD +W +I G F +M K ++ ++
Sbjct: 260 EAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQ 319
Query: 251 --NGLVKEAHSYLEKYPYSNIASW-TNVIVGYFEMGEVGSAIKVFELM-TTRDVTVWNVM 306
K+ H + K Y T ++V Y + V A K+F + +V W M
Sbjct: 320 RELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAM 379
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
I G +N+ E+ + F QM G P++ T+++VL + P+ L Q+HAQ IK
Sbjct: 380 IGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVL---AGKPS-SLLSQLHAQIIKAYY 435
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+ +V+ A++ Y + GN+ + F S+P DI++W++++ GLA +EKA+E+F +
Sbjct: 436 EKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQ 495
Query: 427 MRLTDFKPDDITFVGVLSAC-SYAGLVDQGR 456
+ KP++ TF V++AC S A V+ G+
Sbjct: 496 LVKEGVKPNEYTFSSVINACSSSAATVEHGK 526
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 160/361 (44%), Gaps = 31/361 (8%)
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
A +LFD+ P KD+ +N ++ + N A LF+ +H L ++GL S +
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLG-----VDGLTLSCAL 111
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMG 283
+ C ++ ++ + +K +LE +++ T+++ Y +
Sbjct: 112 -----------KVCGVLFDQVVGRQVHCQSLKSG--FLE-----DVSVGTSLVDMYMKTE 153
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
+ +F+ M ++V W ++ G N L +E + QM+ G +P+ TF +VL
Sbjct: 154 DFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLG 213
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
+D ++ G Q+HA +K T V NA+I MY + + A F S+ + D ++
Sbjct: 214 ALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVT 273
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD-QGRYYFDCM 462
WN +I G A G+ + ++F RMRL K F L CS ++ + + +
Sbjct: 274 WNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVV 333
Query: 463 KNKY-FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
KN Y F Q T ++ + +DEA L + AD + W A++G +N
Sbjct: 334 KNGYEFAQDIR---TALMVTYSKCSSVDEAFKLFS--MADAAH-NVVTWTAMIGGFVQNN 387
Query: 522 N 522
N
Sbjct: 388 N 388
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 201/662 (30%), Positives = 333/662 (50%), Gaps = 79/662 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFT----- 54
++E + +FDK+ + WN+MI Y +G ++ LF QM P F+
Sbjct: 201 LKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKC 260
Query: 55 ------------------------YNTVIAGLMQ----SDNVQGAKEVFDGMEVRDVVTW 86
YNTV+ L+ V+ A+++FD + RDV++W
Sbjct: 261 FAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISW 320
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMDLAESYFKEMGARDV 145
NSMISGYV NGL D + +F M + V + ++ V C +
Sbjct: 321 NSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANI--------------- 365
Query: 146 ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
G + G+++ + + ++V+ N ++ Y G + A +F++M ++
Sbjct: 366 --------GTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEK 417
Query: 206 DLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVLIRNGLVKEA-- 257
+ SW +I G V D AI F +M P+ T SI++ NG +K
Sbjct: 418 TVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVT--SILNACAINGNLKSGKI 475
Query: 258 -HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
H Y+ + + +N + Y + G + A VF M +DV WN MI G +N L
Sbjct: 476 VHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSL 535
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
E L F +M+ PD T +L C+ L LD GR+IH A++ ++ V+NA
Sbjct: 536 PNEALTLFAEMQRE-SKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNA 594
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
++ MY +CG + A F +P D++SW +I G HGY +A+ F +MR+T +PD
Sbjct: 595 VVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPD 654
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
+++F+ +L ACS++GL+D+G F+ MK + ++P HY C+VDLL R G + +A
Sbjct: 655 EVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKF- 713
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
I+A I+ T+WGALL CRIH+++K+ E ER+ ELEP N+G Y++L +Y
Sbjct: 714 --IKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAE 771
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+ E+ +++ ++ + G+KK PGCSWI+I ++F++GD S P+ ++ LL L ++++
Sbjct: 772 KWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMK 831
Query: 616 RE 617
E
Sbjct: 832 EE 833
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 215/501 (42%), Gaps = 98/501 (19%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----------------- 47
+++ AQ LFD++ RD ++WN MI GY KNG D + +F +M
Sbjct: 301 KVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFV 360
Query: 48 -----------------------PERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
+R++ NT++ + ++ A VF+ M+ + VV
Sbjct: 361 ACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVV 420
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMD-------LAESYF 137
+W SMI+GYV GL D A+++F M + VV + +++N ++ + Y
Sbjct: 421 SWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYI 480
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+E ++ + + + N L + G + +A +F M KDV +WN MI GY N
Sbjct: 481 RE---NNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPN 537
Query: 194 VAEDLFQKMHDR---DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
A LF +M D T+ ++ + +D
Sbjct: 538 EALTLFAEMQRESKPDGTTVACILPACASLAALDKG------------------------ 573
Query: 251 NGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
+E H Y + YS TN +V Y + G + A +F+++ +D+ W VMI G
Sbjct: 574 ----REIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAG 629
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
G + G E + F QM+ +G PD +F S+L CS LD G +I I + +
Sbjct: 630 YGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKI----FNIMKKEC 685
Query: 370 TTVSN-----AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALEL 423
N M+ + AR GN+ A ++PI D W +++CG H + A ++
Sbjct: 686 QIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKV 745
Query: 424 FERMRLTDFKPDDITFVGVLS 444
E R+ + +P++ + +L+
Sbjct: 746 AE--RIFELEPENTGYYVLLA 764
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 186/383 (48%), Gaps = 40/383 (10%)
Query: 145 VASWTIMVNGL---------VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
+ S +M++G+ V+ G + E R +FDK+ + WNLMI+ Y +G G +
Sbjct: 176 IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES 235
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
+LF++M + + NS + + F + E +
Sbjct: 236 INLFKQMLELGIKP---------NSYTFSSILKCFAAVARVEEG---------------R 271
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMG-EVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+ H + K +++ + N ++ ++ +G +V A K+F+ +T RDV WN MI G +N
Sbjct: 272 QVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNG 331
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR-NQFTTVS 373
L + G++ F++M G D AT +V C+++ TL LG+ +H+ +IK A ++ +
Sbjct: 332 LDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFN 391
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
N ++ MY++CG++ SA+ F + ++SW S+I G G ++ A++LF+ M+
Sbjct: 392 NTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVV 451
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
PD +L+AC+ G + G+ D ++ L+ S + D+ + G + +A +
Sbjct: 452 PDVYAVTSILNACAINGNLKSGKIVHDYIRENN-LETNSFVSNALTDMYAKCGSMKDAHD 510
Query: 494 LLNEIRADGIEVSPTVWGALLGA 516
+ + ++ + W ++G
Sbjct: 511 VFSHMKKKDV----ISWNTMIGG 529
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 109/276 (39%), Gaps = 42/276 (15%)
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D + S+L +C++ ++ GR++ + + ++ MY +CG+++ + F
Sbjct: 149 DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVF 208
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ I WN +I + G +++ LF++M KP+ TF +L + V+
Sbjct: 209 DKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVE 268
Query: 454 QGR-----------------------YYFDCMK----NKYF--LQPRSA-HYTCVVDLLG 483
+GR +YF K K F L R + ++
Sbjct: 269 EGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYV 328
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI-------AGERVMEL 536
+ GL D + + ++ G+++ + AC + +G++ A E+
Sbjct: 329 KNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREV 388
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
NN+ L +MY CG A R+F +M E V
Sbjct: 389 RFNNT-----LLDMYSKCGDLNSAIRVFERMDEKTV 419
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 212/733 (28%), Positives = 354/733 (48%), Gaps = 129/733 (17%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFT-------- 54
A+ +FD M ++D +WN+++ GY ++G + A L QM P++ F
Sbjct: 164 AKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACAD 223
Query: 55 ----------YNTVIAGLMQSD---------------NVQGAKEVFDGMEVRDVVTWNSM 89
YN ++ +D ++ A +VFD + RD+VTW SM
Sbjct: 224 ARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSM 283
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDV--------------------------------VSW 117
I+G +G +A +F M + V V W
Sbjct: 284 ITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGW 343
Query: 118 NL-------VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+ ++ C M+ A F + R+V SWT M+ G + GRI EA F+K
Sbjct: 344 DTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNK 403
Query: 171 M---------------------PA------------------KDVQAWNLMIAGYLDNGC 191
M P+ D + +++ Y G
Sbjct: 404 MIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGS 463
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISV 247
+ A +F+K+ +++ +W +I V + D A++ F+ + + K T+ SI++V
Sbjct: 464 LKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNV 523
Query: 248 LIRNG---LVKEAHSYLEKYPYSNIASWTNVIVGYF-EMGEVGSAIKVFELMTTRDVTVW 303
+ L K H + K + +N +V F G++ SA +F M RD+ W
Sbjct: 524 CKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSW 583
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
N +I G ++ + +F M+ESG PD TFT +L C+ L GR++HA +
Sbjct: 584 NTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITE 643
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
A + V +I+MY +CG+I+ A F +P ++ SW S+I G A HG ++ALEL
Sbjct: 644 AAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALEL 703
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
F +M+ KPD ITFVG LSAC++AGL+++G ++F MK ++ ++PR HY C+VDL G
Sbjct: 704 FYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFG 762
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGV 543
R GL++EA+ + +++ +E VWGALLGAC++H N+++ E A ++ +EL+PN++GV
Sbjct: 763 RAGLLNEAVEFIIKMQ---VEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGV 819
Query: 544 YLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL 603
++IL+ +Y + G ++ ++ M + GV K+PG SWI+++ H F S D +HP+ +
Sbjct: 820 FVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEI 879
Query: 604 RYLLNLLHTEIER 616
L LH E+ +
Sbjct: 880 HAELERLHMEMRQ 892
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 234/507 (46%), Gaps = 49/507 (9%)
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVEARK 166
+KD N V+ L + + A + + + + +++ ++ ++ + + +
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 167 LFDKMPAKDVQA----WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+++ + VQ WN +I Y G A+ +F M ++D+ SW L+ G V
Sbjct: 132 IYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 223 IDAAISYFKQM-PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW-TNVIVG-- 278
+ A +QM ++ + + +S+L + E Y A W T++ VG
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTA 251
Query: 279 ----YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+ + G++G A KVF+ + TRD+ W MI GL + ++ F +M+E G PD
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPD 311
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
F S+L C+ L+ G+++HA+ ++ + V A+++MY +CG+++ AL F
Sbjct: 312 KVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFD 371
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
V +++SW ++I G A HG ++A F +M + +P+ +TF+ +L ACS + +
Sbjct: 372 LVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKR 431
Query: 455 GRYYFD-CMKNKYFLQPR------SAHYTC--------VVDLLGRFGLI----------- 488
G+ D ++ Y R S + C V + + + ++
Sbjct: 432 GQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQ 491
Query: 489 ----DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEPNNSG 542
D A+ + +GI+ + + + ++L C+ +++++G+ +M+ LE ++
Sbjct: 492 HEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLE-SDLH 550
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKE 569
V L M+++CG AK +F M +
Sbjct: 551 VSNALVSMFVNCGDLMSAKNLFNDMPK 577
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 132/307 (42%), Gaps = 33/307 (10%)
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
+D N ++ L + E ++ ++ S T++++L +C L G +I
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
+ K + N +I MYA+CGN SA F + D+ SWN ++ G HG
Sbjct: 133 YNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM--------------- 462
E+A +L E+M KPD TFV +L+AC+ A VD+GR ++ +
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252
Query: 463 ------------KNKYF--LQPRS-AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
K F L R +T ++ L R G +A NL + +G++
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFA 565
+ +LL AC ++ G+ R+ E+ + +Y+ + MY CG EDA +F
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE-IYVGTAILSMYTKCGSMEDALEVFD 371
Query: 566 QMKENGV 572
+K V
Sbjct: 372 LVKGRNV 378
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 218/716 (30%), Positives = 354/716 (49%), Gaps = 117/716 (16%)
Query: 3 NARIQEAQNLFDKMPQR--DTVTWNVMIRGYFKNGFLDNAMCLFNQM--------PERDM 52
++R+ +A+ LFD+MP R D+V+W MI GY +NGF + F+ M D
Sbjct: 87 SSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP 146
Query: 53 FTY-----------------------------------NTVIAGLMQSDNVQGAKEVFDG 77
F++ N+V+ ++ +V A+ VF
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD 206
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI------GALVNCQRMD 131
+E + WNSMI GY +AL++F+ MP +D VSWN +I G V C M
Sbjct: 207 IERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAM- 265
Query: 132 LAESYFKEMGARDVASWTIMVNGLV----------REGRIVEARKLFDKMP-AKDVQAWN 180
F EM + + M G V + G + AR L +M + D+ N
Sbjct: 266 -----FVEMCNQGFSP-NFMTYGSVLSACASTSDLKWGAHLHARIL--RMEHSLDLVFGN 317
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------- 233
+I Y GC+ +A+ +F+ + + D SW LI G+V+ + A+ F QM
Sbjct: 318 GLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVL 377
Query: 234 --------------PE------------------TCEKTWNSIISVLIRNGLVKEAHSYL 261
P+ + N+II++ + G +A
Sbjct: 378 DEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVF 437
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
P N SWT +I + G++G A F++M R++ WN M+ +N EEGLK
Sbjct: 438 RLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLK 497
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
+V M+ +G PD TFT+ + C+DL + LG Q+ A K + +V+N+++TMY+
Sbjct: 498 LYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYS 557
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
RCG I+ A F S+ D+ISWN+++ A +G K ++ FE M T+ KP+ I++V
Sbjct: 558 RCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVS 617
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
VLS CS+ GLV +G++YFD M + + P + H++C+VDLLGR GL+++A +L+ +
Sbjct: 618 VLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLI-----E 672
Query: 502 GIEVSP--TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRED 559
G+ P TVW ALLG+CR+H+++++ E A +++MEL+ S Y++L+ MY G ++
Sbjct: 673 GMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDN 732
Query: 560 AKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+ MK G++ GCSWI++++ HVF ++SHP+ + L + IE
Sbjct: 733 VADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIE 788
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 212/475 (44%), Gaps = 44/475 (9%)
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA--KDVQAWNLMI 183
NC A F+E R++ +W M+ LV R+ +A KLFD+MP KD +W MI
Sbjct: 55 NCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMI 114
Query: 184 AGYLDNGCVGVAEDLFQKMHDRD------------LTSWKQLINGLVNSR---RIDAAIS 228
+GY NG + + F M RD TS + L +SR ++ A +S
Sbjct: 115 SGYSQNGFHSRSFETFSLM-IRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVS 173
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
ETC + NS++ + ++ G V A + ++ W ++I GY +M A
Sbjct: 174 KLGFGMETCIQ--NSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKA 231
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+++F M RD WN +I ++ G + L FV+M G SP+ T+ SVL+ C+
Sbjct: 232 LQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAST 291
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
L G +HA+ +++ + N +I MYA+CG + A F S+ HD ISWNS+I
Sbjct: 292 SDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLI 351
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
G+ + G E AL LF +MR + D+ +L CS G K +
Sbjct: 352 TGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGE-LLHGYTIKSGM 410
Query: 469 QPRSAHYTCVVDLLGRFGLIDEA------MNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
+ ++ + + G D+A M L N I W A++ A
Sbjct: 411 GSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTIS----------WTAMITAFS---- 456
Query: 523 IKVGEIAGER-VMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
+ G+I R ++ P N + + Y+ G E+ +++ M+ NGV+ +
Sbjct: 457 -RSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPD 510
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 131/535 (24%), Positives = 206/535 (38%), Gaps = 120/535 (22%)
Query: 97 GLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR--DVASWTIMVNG 154
GL +A +VF +++ +WN +I ALV+ RM AE F EM R D SWT M++G
Sbjct: 57 GLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISG 116
Query: 155 LVREG---RIVEARKLF---------------------------DKMPAKDVQAW----- 179
+ G R E L D A + A
Sbjct: 117 YSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLG 176
Query: 180 --------NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
N ++ Y+ G V +AE +F + L W +I G A+ F
Sbjct: 177 FGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFN 236
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEA---------------------------------- 257
+MPE E +WN++IS+ ++G +
Sbjct: 237 RMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKW 296
Query: 258 ----HSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
H+ + + +S ++ +I Y + G + A +VF+ + D WN +I G+
Sbjct: 297 GAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVH 356
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
LGE+ L F QM+ S D ++L +CS G +H IK V
Sbjct: 357 FGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPV 416
Query: 373 SNAMITMYARCGNIQSALLEFSSVPI-------------------------------HDI 401
NA+ITMYA+CG+ A L F +P+ +I
Sbjct: 417 GNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNI 476
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
++WNS++ +G++E+ L+L+ MR +PD ITF + AC+ +V G
Sbjct: 477 VTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVT- 535
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
K+ L + +V + R GLI EA N + I + W A+L A
Sbjct: 536 HATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDL----ISWNAMLAA 586
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 107/232 (46%), Gaps = 20/232 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
R+ I +A+ FD MP+R+ VTWN M+ Y +NGF + + L+ M + D T+ T
Sbjct: 457 RSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTT 516
Query: 58 VIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
I V+ +V G+ + +V NS+++ Y GLI EA F + K
Sbjct: 517 SIRACADLAIVKLGMQVVTHATKFGLSL-NVSVANSIVTMYSRCGLIKEAKNTFDSIDDK 575
Query: 113 DVVSWNLVIGAL----VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
D++SWN ++ A + + +D E K + S+ +++G G + E + F
Sbjct: 576 DLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYF 635
Query: 169 DKMP-----AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR-DLTSWKQLI 214
D M + + ++ M+ G + A+DL + M + + T W L+
Sbjct: 636 DSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALL 687
>gi|414873978|tpg|DAA52535.1| TPA: hypothetical protein ZEAMMB73_896450 [Zea mays]
gi|414873979|tpg|DAA52536.1| TPA: hypothetical protein ZEAMMB73_896450 [Zea mays]
Length = 701
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 298/549 (54%), Gaps = 9/549 (1%)
Query: 55 YNTVIAGLMQSDNVQGAKEVFDGMEV--RDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
Y ++A ++ ++ A+ +F R + +M+ GY G +D A +F MP+K
Sbjct: 119 YAAMVASRLRERDLTRAEALFGAAPAAARGLYLDTAMLDGYAKAGRVDRARELFDAMPVK 178
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
+VV+W ++ R+ A F M R+ SWT +V G R G + EAR++FD+MP
Sbjct: 179 NVVTWTSMVSGYFRAGRVQEARELFDVMPERNDYSWTTVVQGYARNGMLREAREMFDRMP 238
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
++V AW M+ Y+D G + A +LF M +R+ SW +I+G ++ ++ A+ F++
Sbjct: 239 QRNVVAWTAMVKAYVDCGQIQQAWELFDMMPERNSYSWNAMISGFLSIGKVAEAVQLFER 298
Query: 233 MPETCEK--TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
MP + +W ++++ L NGL A + ++ P + A+W +I Y G++ A +
Sbjct: 299 MPHRHKNVVSWTTMVAGLANNGLACRAREFFDRMPAKDTAAWNAIITVYANNGQLNEAQR 358
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+F+ M +D+ W+ +I +N+ E L F+ M+ S SP+ T S+L I T
Sbjct: 359 LFDSMLAKDLVTWSTIIEAYSKNERKHEALNMFLLMRHSAVSPNIRTLISILVISES--T 416
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
+++ +QIH I + T++ NA++TMY+R G++ SA F + D I+W SI+
Sbjct: 417 VEV-KQIHGLVIALGFLSETSLGNALLTMYSRSGDLMSAWFAFKRLEQKDAITWTSIVQA 475
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
A HG AL F +M +KP TF VLSAC + GLV +GR F + + Y L+P
Sbjct: 476 FADHGCGYHALLGFAQMLRHGYKPSSTTFTAVLSACRHVGLVGKGRKMFKSIYHVYGLEP 535
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
HY+C+VDLLGR G + EA L++ ++ G+ + LLGAC +HN ++V G
Sbjct: 536 TIEHYSCLVDLLGRAGYVREAKELVDGMQ-QGMR-DEAILATLLGACVVHNEVEVAREVG 593
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVF 590
E ++ +P+ +G Y +L ++ S G ++ ++ M+ + K+ PG S I++N HVF
Sbjct: 594 EDLVRFDPSGTGGYRLLANVFASHGMWDETANVWKVMRGSKAKRTPGFSQIEVNMRNHVF 653
Query: 591 LSGDSSHPK 599
S D HP+
Sbjct: 654 YSRDQEHPQ 662
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 179/371 (48%), Gaps = 38/371 (10%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
M+ GY K G +D A LF+ MP +++ T+ ++++G ++ VQ A+E+FD M R+
Sbjct: 153 TAMLDGYAKAGRVDRARELFDAMPVKNVVTWTSMVSGYFRAGRVQEARELFDVMPERNDY 212
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR- 143
+W +++ GY NG++ EA +F MP ++VV+W ++ A V+C ++ A F M R
Sbjct: 213 SWTTVVQGYARNGMLREAREMFDRMPQRNVVAWTAMVKAYVDCGQIQQAWELFDMMPERN 272
Query: 144 --------------------------------DVASWTIMVNGLVREGRIVEARKLFDKM 171
+V SWT MV GL G AR+ FD+M
Sbjct: 273 SYSWNAMISGFLSIGKVAEAVQLFERMPHRHKNVVSWTTMVAGLANNGLACRAREFFDRM 332
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
PAKD AWN +I Y +NG + A+ LF M +DL +W +I + R A++ F
Sbjct: 333 PAKDTAAWNAIITVYANNGQLNEAQRLFDSMLAKDLVTWSTIIEAYSKNERKHEALNMFL 392
Query: 232 QMPETC-EKTWNSIISVLI---RNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVG 286
M + ++IS+L+ VK+ H + + + S N ++ Y G++
Sbjct: 393 LMRHSAVSPNIRTLISILVISESTVEVKQIHGLVIALGFLSETSLGNALLTMYSRSGDLM 452
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
SA F+ + +D W ++ ++ G L F QM G P + TFT+VL+ C
Sbjct: 453 SAWFAFKRLEQKDAITWTSIVQAFADHGCGYHALLGFAQMLRHGYKPSSTTFTAVLSACR 512
Query: 347 DLPTLDLGRQI 357
+ + GR++
Sbjct: 513 HVGLVGKGRKM 523
>gi|242080473|ref|XP_002445005.1| hypothetical protein SORBIDRAFT_07g002620 [Sorghum bicolor]
gi|241941355|gb|EES14500.1| hypothetical protein SORBIDRAFT_07g002620 [Sorghum bicolor]
Length = 679
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 189/621 (30%), Positives = 327/621 (52%), Gaps = 44/621 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R RIQ+AQ LFD+MP RD ++W ++ Y G L +A +F+ MP R+ ++N +++
Sbjct: 53 RRGRIQDAQQLFDRMPHRDVISWTALLTAYADVGNLASARFVFDDMPLRNAASWNALVSL 112
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWNL 119
+++ A +F ++ V++ ++I+G G++ EA V+ MP +D V N
Sbjct: 113 YLRAGRPAAAHALFCKAPAKNAVSYGAIITGLARAGMLREAQAVYWEMPPRWRDPVGSNA 172
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
+I + + +A F M ARDV SW+ MV+GL + G + EAR+LF+ MP ++V +W
Sbjct: 173 MIWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEARRLFEAMPERNVVSW 232
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDA---------- 225
MI GY+ +G LF M ++ + +++G + +D
Sbjct: 233 TSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQASLVDEGSQVHCLMIR 292
Query: 226 -------------------------AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
A S F M + +WNS+I+ ++N ++++AH
Sbjct: 293 MGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSLITGYVQNDMIEDAHVL 352
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+ P + SWT+++VG+ G + ++++FE M +D W ++ L N +
Sbjct: 353 FKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWAAVMSSLVANGNYVSAV 412
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
++F QM + G P+ F+ +L+ + L L+ G Q HA A+ + + V +++TMY
Sbjct: 413 RWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGWIFDSAVHASLVTMY 472
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
A+CG + A FS + +I+ NS+I A HG AE A +LF RM+ +P+ +TF+
Sbjct: 473 AKCGRLAEAHRVFSCISHPSLIATNSMITAFAQHGLAEDAFKLFNRMQYDGQRPNHVTFL 532
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
G+L+AC+ AGLV G YF+ M++ Y +QP HYTC+VDLLGR G ++EA+ + N +
Sbjct: 533 GILTACARAGLVQHGYNYFESMRSVYGIQPNPDHYTCMVDLLGRAGFLNEALEMTNSMPQ 592
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
P W LL + +H+N+ + ++A +R++E++P ++ Y +L+ M+ S G +ED
Sbjct: 593 KDY---PDAWKVLLSSSSLHSNLDLAKLAAQRLLEIDPYDATAYTVLSNMFSSAGMKEDE 649
Query: 561 KRIFAQMKENGVKKEPGCSWI 581
+ + N K PG S I
Sbjct: 650 EMVKVAQLSNMASKSPGYSLI 670
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/531 (24%), Positives = 220/531 (41%), Gaps = 94/531 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTV 58
+R R A LF K P ++ V++ +I G + G L A ++ +MP RD N +
Sbjct: 114 LRAGRPAAAHALFCKAPAKNAVSYGAIITGLARAGMLREAQAVYWEMPPRWRDPVGSNAM 173
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
I G ++ + A VFDGM RDV++W++M+ G G + EA R+F MP ++VVSW
Sbjct: 174 IWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEARRLFEAMPERNVVSWT 233
Query: 119 LVI----------------------GALVN----------CQRMDLAES------YFKEM 140
+I G VN C + L + M
Sbjct: 234 SMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQASLVDEGSQVHCLMIRM 293
Query: 141 G-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
G A D+ ++ R G + +AR LF M KD+ +WN +I GY+ N + A LF
Sbjct: 294 GFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSLITGYVQNDMIEDAHVLF 353
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
+ M ++D SW ++ G N + ++ F+QMP E W +++S L+ NG A
Sbjct: 354 KLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWAAVMSSLVANGNYVSAVR 413
Query: 260 Y--------------------------------LEKYPYSNIASW-------TNVIVGYF 280
+ L+ + Y+ W +++ Y
Sbjct: 414 WFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGWIFDSAVHASLVTMYA 473
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G + A +VF ++ + N MI ++ L E+ K F +M+ G P++ TF
Sbjct: 474 KCGRLAEAHRVFSCISHPSLIATNSMITAFAQHGLAEDAFKLFNRMQYDGQRPNHVTFLG 533
Query: 341 VLTICSDLPTLDLG-------RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+LT C+ + G R ++ I+ + +T M+ + R G + AL
Sbjct: 534 ILTACARAGLVQHGYNYFESMRSVY--GIQPNPDHYTC----MVDLLGRAGFLNEALEMT 587
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+S+P D ++ + +L + RL + P D T VLS
Sbjct: 588 NSMPQKDYPDAWKVLLSSSSLHSNLDLAKLAAQ-RLLEIDPYDATAYTVLS 637
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 130/311 (41%), Gaps = 26/311 (8%)
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
N A ++ Y G + A ++F+ M RDV W ++ D+G FV
Sbjct: 40 NRAHLNALLTSYGRRGRIQDAQQLFDRMPHRDVISWTALLTAYA--DVGNLASARFV--F 95
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNI 386
+ P + A++ +++++ L GR A A+ VS A+IT AR G +
Sbjct: 96 DDMPLRNAASWNALVSL-----YLRAGRPAAAHALFCKAPAKNAVSYGAIITGLARAGML 150
Query: 387 QSALLEFSSVPI--HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+ A + +P D + N++I G G AL +F+ M D I++ ++
Sbjct: 151 REAQAVYWEMPPRWRDPVGSNAMIWGYLRGGELGMALRVFDGMAARDV----ISWSAMVD 206
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
G V + R F+ M + + +T ++ + G+ + + L ++R +G++
Sbjct: 207 GLCKYGTVSEARRLFEAMPERNVVS-----WTSMIRGYVKHGMYRDGLLLFLDMRREGVQ 261
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMEL---EPNNSGVYLILTEMYLSCGRREDAK 561
V+ +L C + + G ++ + E G LI+ MY G DA+
Sbjct: 262 VNMITLSVVLDGCAQASLVDEGSQVHCLMIRMGFAEDIFLGDSLII--MYSRFGSMADAR 319
Query: 562 RIFAQMKENGV 572
+F+ M + +
Sbjct: 320 SLFSFMNQKDI 330
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 206/631 (32%), Positives = 348/631 (55%), Gaps = 47/631 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFT 54
M+ + + + +FD+M +R+ V+W ++ GY NG LF QM P R +T
Sbjct: 139 MKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNR--YT 196
Query: 55 YNTVIAGLMQSDNVQGAKEVFDGMEVRD-----VVTWNSMISGYVCNGLIDEALRVFHGM 109
+TVIA L+ ++ V G M V+ + +NS+IS Y G++ +A VF M
Sbjct: 197 VSTVIAALV-NEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKM 255
Query: 110 PLKDVVSWNLVIGALV-NCQRMDLAESYFKEMGARDVASWTIMVNGLVREG--------- 159
++D V+WN +I V N Q +++ E F +M V + +++
Sbjct: 256 EIRDWVTWNSMIAGYVRNGQDLEVFE-IFNKMQLAGVKPTHMTFASVIKSCASLRELALV 314
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIA----GYLDNGCVGVAEDLFQKMHD-RDLTSWKQLI 214
++++ + L + LM+A +D+ A LF M + +++ SW +I
Sbjct: 315 KLMQCKALKSGFTTDQIVITALMVALSKCKEMDD-----ALSLFSLMEEGKNVVSWTAMI 369
Query: 215 NGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
+G + + D A++ F QM K T+++I++V V E H+ + K Y +
Sbjct: 370 SGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYP-VFVSEMHAEVIKTNYERSS 428
Query: 271 S-WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
S T ++ Y ++G A+KVFE++ +D+ W+ M+ G + EE K F Q+ +
Sbjct: 429 SVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKE 488
Query: 330 GPSPDNATFTSVLTICSDLPTL--DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
G P+ TF+SV+ C+ PT + G+Q HA AIK+ N VS+A++TMYA+ GNI
Sbjct: 489 GIKPNEFTFSSVINACAS-PTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNID 547
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
SA F D++SWNS+I G + HG A+KALE+F+ M+ + D +TF+GV++AC+
Sbjct: 548 SAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACT 607
Query: 448 YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
+AGLV++G+ YF+ M N + + P HY+C++DL R G++++AM ++NE+
Sbjct: 608 HAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEM---PFPPGA 664
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
TVW LLGA R+H N+++GE+A E+++ L+P +S Y++L+ MY + G ++ + M
Sbjct: 665 TVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLM 724
Query: 568 KENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+ VKKEPG SWI++ + + FL+GD +HP
Sbjct: 725 DKRKVKKEPGYSWIEVKNKTYSFLAGDLTHP 755
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/526 (23%), Positives = 224/526 (42%), Gaps = 101/526 (19%)
Query: 71 AKEVFDGMEVRDVV--TWNSMISGYVCNGLIDEALRVFHGM------PLKDVVS--WNLV 120
A +FD + R N ++ Y + EAL +F + P + +S +N+
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 121 IGAL-------VNCQRMDLAESYFKEMGARD-VASWTIMVNGLVREGRIVEARKLFDKMP 172
G+L V+CQ + + G D V+ T +V+ ++ + + R++FD+M
Sbjct: 104 AGSLDGKLGRQVHCQCV--------KFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMG 155
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
++V +W ++AGY NG G +LF +M G++ +R
Sbjct: 156 ERNVVSWTSLLAGYSWNGLYGYVWELFCQMQ----------YEGVLPNRY---------- 195
Query: 233 MPETCEKTWNSIISVLIRNGLVK---EAHSYLEKYPYSN-IASWTNVIVGYFEMGEVGSA 288
T +++I+ L+ G+V + H+ + K+ + I + ++I Y +G + A
Sbjct: 196 -------TVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDA 248
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
VF+ M RD WN MI G N E + F +M+ +G P + TF SV+ C+ L
Sbjct: 249 RDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASL 308
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI-HDIISWNSI 407
L L + + +A+K V A++ ++C + AL FS + +++SW ++
Sbjct: 309 RELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAM 368
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
I G +G ++A+ LF +MR KP+ T+ +L+ Y V + + + +K Y
Sbjct: 369 ISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTV-HYPVFVSE--MHAEVIKTNY- 424
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
+ S+ T ++D + G +A+ + I A + W A+L
Sbjct: 425 -ERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDL----MAWSAMLAG----------- 468
Query: 528 IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
Y G E+A ++F Q+ + G+K
Sbjct: 469 -----------------------YAQTGETEEAAKLFHQLIKEGIK 491
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 180/418 (43%), Gaps = 49/418 (11%)
Query: 191 CVG-VAEDLFQKMHDRDLT--SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
CV +A +LF K+ R T QL+ ++ A++ F + + + S +S
Sbjct: 39 CVPHIAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSC 98
Query: 248 L-------IRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+ + L ++ H K+ +++ T+++ Y + V +VF+ M R+
Sbjct: 99 VFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERN 158
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
V W ++ G N L + F QM+ G P+ T ++V+ + + +G Q+HA
Sbjct: 159 VVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHA 218
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
+K + V N++I++Y+R G ++ A F + I D ++WNS+I G +G +
Sbjct: 219 MVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLE 278
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF-DCMKNKYFLQPRSAHYTCV 478
E+F +M+L KP +TF V+ +C A L + C K T +
Sbjct: 279 VFEIFNKMQLAGVKPTHMTFASVIKSC--ASLRELALVKLMQCKALKSGFTTDQIVITAL 336
Query: 479 V----------DLLGRFGLI----------------------DEAMNLLNEIRADGIEVS 506
+ D L F L+ D+A+NL +++R +G++ +
Sbjct: 337 MVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPN 396
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ A+L +H + V E+ E + +S V L + Y+ G DA ++F
Sbjct: 397 HFTYSAIL---TVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVF 451
>gi|308044597|ref|NP_001182884.1| uncharacterized protein LOC100501159 [Zea mays]
gi|238007964|gb|ACR35017.1| unknown [Zea mays]
Length = 580
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 172/515 (33%), Positives = 284/515 (55%), Gaps = 7/515 (1%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA 146
+M+ GY G +D A +F MP+K+VV+W ++ R+ A F M R+
Sbjct: 32 TAMLDGYAKAGRVDRARELFDAMPVKNVVTWTSMVSGYFRAGRVQEARELFDVMPERNDY 91
Query: 147 SWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRD 206
SWT +V G R G + EAR++FD+MP ++V AW M+ Y+D G + A +LF M +R+
Sbjct: 92 SWTTVVQGYARNGMLREAREMFDRMPQRNVVAWTAMVKAYVDCGQIQQAWELFDMMPERN 151
Query: 207 LTSWKQLINGLVNSRRIDAAISYFKQMPETCEK--TWNSIISVLIRNGLVKEAHSYLEKY 264
SW +I+G ++ ++ A+ F++MP + +W ++++ L NGL A + ++
Sbjct: 152 SYSWNAMISGFLSIGKVAEAVQLFERMPHRHKNVVSWTTMVAGLANNGLACRAREFFDRM 211
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
P + A+W +I Y G++ A ++F+ M +D+ W+ +I +N+ E L F+
Sbjct: 212 PAKDTAAWNAIITVYANNGQLNEAQRLFDSMLAKDLVTWSTIIEAYSKNERKHEALNMFL 271
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
M+ S SP+ T S+L I T+++ +QIH I + T++ NA++TMY+R G
Sbjct: 272 LMRHSAVSPNIRTLISILVISES--TVEV-KQIHGLVIALGFLSETSLGNALLTMYSRSG 328
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
++ SA F + D I+W SI+ A HG AL F +M +KP TF VLS
Sbjct: 329 DLMSAWFAFKRLEQKDAITWTSIVQAFADHGCGYHALLGFAQMLRHGYKPSSTTFTAVLS 388
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
AC + GLV +GR F + + Y L+P HY+C+VDLLGR G + EA L++ ++ G+
Sbjct: 389 ACRHVGLVGKGRKMFKSIYHVYGLEPTIEHYSCLVDLLGRAGYVREAKELVDGMQ-QGMR 447
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ LLGAC +HN ++V GE ++ +P+ +G Y +L ++ S G ++ ++
Sbjct: 448 -DEAILATLLGACVVHNEVEVAREVGEDLVRFDPSGTGGYRLLANVFASHGMWDETANVW 506
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
M+ + K+ PG S I++N HVF S D HP+
Sbjct: 507 KVMRGSKAKRTPGFSQIEVNMRNHVFYSRDQEHPQ 541
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 179/371 (48%), Gaps = 38/371 (10%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
M+ GY K G +D A LF+ MP +++ T+ ++++G ++ VQ A+E+FD M R+
Sbjct: 32 TAMLDGYAKAGRVDRARELFDAMPVKNVVTWTSMVSGYFRAGRVQEARELFDVMPERNDY 91
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR- 143
+W +++ GY NG++ EA +F MP ++VV+W ++ A V+C ++ A F M R
Sbjct: 92 SWTTVVQGYARNGMLREAREMFDRMPQRNVVAWTAMVKAYVDCGQIQQAWELFDMMPERN 151
Query: 144 --------------------------------DVASWTIMVNGLVREGRIVEARKLFDKM 171
+V SWT MV GL G AR+ FD+M
Sbjct: 152 SYSWNAMISGFLSIGKVAEAVQLFERMPHRHKNVVSWTTMVAGLANNGLACRAREFFDRM 211
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
PAKD AWN +I Y +NG + A+ LF M +DL +W +I + R A++ F
Sbjct: 212 PAKDTAAWNAIITVYANNGQLNEAQRLFDSMLAKDLVTWSTIIEAYSKNERKHEALNMFL 271
Query: 232 QMPETC-EKTWNSIISVLI---RNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVG 286
M + ++IS+L+ VK+ H + + + S N ++ Y G++
Sbjct: 272 LMRHSAVSPNIRTLISILVISESTVEVKQIHGLVIALGFLSETSLGNALLTMYSRSGDLM 331
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
SA F+ + +D W ++ ++ G L F QM G P + TFT+VL+ C
Sbjct: 332 SAWFAFKRLEQKDAITWTSIVQAFADHGCGYHALLGFAQMLRHGYKPSSTTFTAVLSACR 391
Query: 347 DLPTLDLGRQI 357
+ + GR++
Sbjct: 392 HVGLVGKGRKM 402
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 208/625 (33%), Positives = 328/625 (52%), Gaps = 46/625 (7%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-PERDMFTYNTVIAG 61
++RI +A+ LFD MP D TWN+MI Y + LD+A LF+ M RD+ ++ ++AG
Sbjct: 86 SSRIHDARALFDSMPGFDAFTWNIMIAAYARINRLDDARELFHGMISGRDVVSWAILVAG 145
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFH---GMPLKDVVSWN 118
+ D ++ A +F M + D VT S++ GY NG + EA +F G +D + N
Sbjct: 146 YARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAGDRDATACN 205
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+I A R+DLAE F ++ R+ ASW++++ + G + A+K FD+MP +D A
Sbjct: 206 AMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQRDSIA 265
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
+ M A D G + A ++ + + D+ +W L+ G + +D F M
Sbjct: 266 FTAMTAVLSDQGELRGAREMLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRTV 325
Query: 239 KTW---NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
T +++++ + G V +A L+ P SWT +I Y + G AI +F+ M
Sbjct: 326 ATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCM 385
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
DL G P + T SV+ C+ L TL LG+
Sbjct: 386 ------------------DL-------------EGAEPSDITLISVVDSCAVLGTLSLGK 414
Query: 356 QIHAQAIKIAR--NQFTTVSNAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGL 411
+IHA+ I+ + +Q + NA+ITMY +CGN++ A F SVP+ +++W ++I
Sbjct: 415 RIHAR-IRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAY 473
Query: 412 AYHGYAEKALELFERMRLT-DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
A +G E+A+ELF+ M + +P+ +TF+ VLSACS+ G ++Q +F M + + P
Sbjct: 474 AQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPP 533
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
HY C+VDLLGR G + EA LL +R E W A L AC+++ +++ + A
Sbjct: 534 AGDHYCCLVDLLGRAGRLGEAEKLL--LRHKDFEADVVCWIAFLSACQMNGDLERSQRAA 591
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVF 590
+RV ELEP N ++L+ +Y + GRR D RI +MK +GVKK G SWI+IN+ H F
Sbjct: 592 KRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEF 651
Query: 591 LSGDSSHPKFHRLRYLLNLLHTEIE 615
+ D SHP+ + L LH EI+
Sbjct: 652 MVSDVSHPRKLEIYSELERLHREIK 676
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 217/468 (46%), Gaps = 31/468 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM---PERDMFTYNTV 58
R+ R++EA LF +MP DTVT +++GY NG L A LF+++ +RD N +
Sbjct: 148 RHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAGDRDATACNAM 207
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
IA ++ V A+ +F +++R+ +W+ ++ Y NG +D A + F MP +D +++
Sbjct: 208 IAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQRDSIAFT 267
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+ L + + A + + A DV +W ++ G R G + E R+LF M + V
Sbjct: 268 AMTAVLSDQGELRGAREMLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAMEHRTVA- 326
Query: 179 WNLMIAGYLDN-----GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
++AG L N G V A + M R SW +I + AI+ F+ M
Sbjct: 327 -TTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCM 385
Query: 234 ----PETCEKTWNSII---SVLIRNGLVKEAHSYLEKYPY--SNIASWTNVIVGYFEMGE 284
E + T S++ +VL L K H+ + P ++ VI Y + G
Sbjct: 386 DLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGN 445
Query: 285 VGSAIKVFEL--MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK-ESGPSPDNATFTSV 341
+ A +VFE + TR V W MI +N +GEE ++ F +M + G P+ TF SV
Sbjct: 446 LELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSV 505
Query: 342 LTICSDLPTLDLGRQIHAQ-----AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
L+ CS L L+ + + A + + + + ++ R G + LL
Sbjct: 506 LSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVD-LLGRAGRLGEAEKLLLRHKDF 564
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
D++ W + + +G E++ + R+++ +P+++ +LS
Sbjct: 565 EA-DVVCWIAFLSACQMNGDLERSQRAAK--RVSELEPENVAGRVLLS 609
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 206/491 (41%), Gaps = 52/491 (10%)
Query: 98 LIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR 157
L DE R HG + NL+I C D A + F + + SW+ ++ V
Sbjct: 29 LHDEIARSPHGDNRRLT---NLLIDLFGKCGDPDAARAVFNRVRLPNEYSWSCIIQAYVS 85
Query: 158 EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM-HDRDLTSWKQLING 216
RI +AR LFD MP D WN+MIA Y + A +LF M RD+ SW L+ G
Sbjct: 86 SSRIHDARALFDSMPGFDAFTWNIMIAAYARINRLDDARELFHGMISGRDVVSWAILVAG 145
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS---NIASWT 273
R++ A + F++MP T S++ NG + EA ++ + + +
Sbjct: 146 YARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAGDRDATACN 205
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
+I Y + V A +F + R+ W++++ +N + K F +M P
Sbjct: 206 AMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRM----PQR 261
Query: 334 DNATFTSVLTICSDLPTLDLGRQI--HAQAIKI------------------ARNQF---- 369
D+ FT++ + SD L R++ + A+ + R F
Sbjct: 262 DSIAFTAMTAVLSDQGELRGAREMLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAME 321
Query: 370 ------TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
T V+ ++ +Y +CG + A ++P+ +SW ++I A +G A +A+ L
Sbjct: 322 HRTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINL 381
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
F+ M L +P DIT + V+ +C+ G + G+ +++ V+ + G
Sbjct: 382 FQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYG 441
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL------E 537
+ G ++ A + + V W A++ R + VGE A E E+ E
Sbjct: 442 KCGNLELAREVFESVPLRTRSV--VTWTAMI---RAYAQNGVGEEAIELFQEMVIDGGTE 496
Query: 538 PNNSGVYLILT 548
PN +L+
Sbjct: 497 PNRVTFLSVLS 507
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 170/462 (36%), Positives = 263/462 (56%), Gaps = 4/462 (0%)
Query: 140 MGARDVASWTIMVNGLVRE-GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
M + +W ++ G+ ++ G++ EA++LF K+P D ++N M++ Y+ N + A+
Sbjct: 1 MTLKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAF 60
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
F+ M +D SW +I G ++++D A F MP TWN++IS + G + A
Sbjct: 61 FEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSAL 120
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
EK P+ ++ +WT +I GY ++G +G A ++FE M +++ WN MI G EN E+
Sbjct: 121 KLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAED 180
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
G+K F M G P+++T +S L CS+L L LGRQ+H K TT ++I+
Sbjct: 181 GVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLIS 240
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MY +CG ++ F VP D+++WN++I G A HG +KAL LF+ M KPD IT
Sbjct: 241 MYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWIT 300
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
FV VL AC++AG D G YF M Y L + HYTC+VDLLGR G + EA++L+ ++
Sbjct: 301 FVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKM 360
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
+ V+G LLGACRIH N ++ E A ++++ L+P ++ Y+ L +Y + R +
Sbjct: 361 ---PFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWD 417
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
R+ MK V K PG SWI++ H F SGD HP+
Sbjct: 418 HVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPEL 459
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 193/386 (50%), Gaps = 27/386 (6%)
Query: 16 MPQRDTVTWNVMIRGYFKN-GFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEV 74
M + TVTWN ++ G K G L A LF ++PE D +YNT+++ +++ N++ A+
Sbjct: 1 MTLKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAF 60
Query: 75 FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAE 134
F+ M ++D +WN+MI+G+ N +D+A +F MP K+VV+WN +I V C +D A
Sbjct: 61 FEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSAL 120
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
F++ + V +WT M+ G ++ GRI A +LF+KMP K++ WN MIAGY++N
Sbjct: 121 KLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAED 180
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
LF+ M + NS + +A+ C S +S L L
Sbjct: 181 GVKLFRTMVGFGIQP---------NSSTLSSALL-------GC-----SELSAL---QLG 216
Query: 255 KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
++ H + K P + + T++I Y + G + K+F + RDV WN MI G ++
Sbjct: 217 RQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQH 276
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG-RQIHAQAIKIARNQFTTV 372
G++ L F +M E G PD TF +VL C+ DLG + H+ A
Sbjct: 277 GEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDH 336
Query: 373 SNAMITMYARCGNIQSALLEFSSVPI 398
M+ + R G + A+ +P
Sbjct: 337 YTCMVDLLGRAGKLVEAVDLIEKMPF 362
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 198/631 (31%), Positives = 315/631 (49%), Gaps = 59/631 (9%)
Query: 42 CLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDE 101
C+ + F NT+++ + ++ A+ VFDG+ +R+ ++N+++S Y G DE
Sbjct: 42 CVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRPDE 101
Query: 102 ALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESY------------------------- 136
A +F +P D S+N V+ AL R ++
Sbjct: 102 ARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSAC 161
Query: 137 ----------------FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ A DV T +V+ + R V+AR++FD MP ++V +WN
Sbjct: 162 AAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWN 221
Query: 181 LMIAGYLDNGCVGVAEDLFQKM-------HDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
+I Y NG VG A LF +M + L+S GL R ++ +
Sbjct: 222 SLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKR 281
Query: 234 PETCEKTW--NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
+ N+++ + + G EA + P ++ S T+++ GY + V A V
Sbjct: 282 DRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVV 341
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F M ++V WNV+I +N EE ++ FVQ+K P + T+ +VL C ++ L
Sbjct: 342 FSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVL 401
Query: 352 DLGRQIHAQAIKIA-RNQFTT-----VSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
LG+Q H +K R F V N+++ MY + G+I F + D +SWN
Sbjct: 402 QLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWN 461
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNK 465
++I G A +G A+ AL LFERM ++ PD +T +GVLSAC ++GLVD+GR +F M
Sbjct: 462 AMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTED 521
Query: 466 YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKV 525
+ + P HYTC+VDLLGR G + EA L+ ++ E +W +LLGACR+H N+++
Sbjct: 522 HGITPSRDHYTCMVDLLGRAGHLKEAEELIKDM---PTEPDSVLWASLLGACRLHKNVEL 578
Query: 526 GEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
GE R+ EL+P NSG Y++L+ MY G+ D R+ MK+ GV K+PGCSWI+I
Sbjct: 579 GERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGS 638
Query: 586 GGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+VFL+ D+ HP + + L ++ E+ R
Sbjct: 639 KMNVFLARDNRHPCRNEIHSTLRIIQMEMCR 669
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 99/255 (38%), Gaps = 48/255 (18%)
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
G + ++ S P D + P+L R H +K T + N +++
Sbjct: 10 GQELVAHLRASSPLAD---------LLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVS 60
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
YAR G ++ A F +P+ + S+N+++ A G ++A LFE + PD +
Sbjct: 61 TYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRPDEARALFEAIP----DPDQCS 116
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
+ V++A L GR G +A+ L +
Sbjct: 117 YNAVVAA-----LARHGR-----------------------------GHAGDALRFLAAM 142
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGE-IAGERVMELEPNNSGVYLILTEMYLSCGRR 557
AD ++ + + L AC +++ GE + G ++ + L +MY C R
Sbjct: 143 HADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERP 202
Query: 558 EDAKRIFAQMKENGV 572
DA+R+F M E V
Sbjct: 203 VDARRVFDAMPERNV 217
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 53/174 (30%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ I + +F++M RD V+WN MI GY +NG +A+ LF +M
Sbjct: 437 LKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERM------------- 483
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
L ++N D VT ++S +GL+DE R FH M ++
Sbjct: 484 -LCSNENP-------------DSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGIT---- 525
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
+RD +T MV+ L R G + EA +L MP +
Sbjct: 526 --------------------PSRD--HYTCMVDLLGRAGHLKEAEELIKDMPTE 557
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 215/663 (32%), Positives = 332/663 (50%), Gaps = 77/663 (11%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNA--MCLFNQMPERDMFTYNTVIAGL 62
+ +A+ +FD++ +D ++WN +I GY + G ++ M LF +M ++ +G+
Sbjct: 58 HLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGI 117
Query: 63 MQS-DNVQG--------------------------------------AKEVFDGMEVRDV 83
+ N+ A+EVFD M R+
Sbjct: 118 FTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNE 177
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGM--PLKDV--VSWNLVIGALVNCQRMDLAESYFKE 139
VTW +MISGY L EA VF M +DV ++ V+ AL + +D +
Sbjct: 178 VTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCL 237
Query: 140 MGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
+ + ++N LV + G + ++ ++F+ K+ W+ MI GY +G A
Sbjct: 238 AVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKA 297
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
LF +MH + + + G++N+ A+ KQ+
Sbjct: 298 LKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQV---------------------- 335
Query: 256 EAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
H+YL K + S + T ++ Y + G A K F + D+ +W MI G +N
Sbjct: 336 --HNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNG 393
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
E+ L + +M+ G P+ T SVL CS+L D GRQIHA+ IK T+ +
Sbjct: 394 ENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGS 453
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
A+ TMYA+CGN++ + F +P DIISWN++I GL+ +GY ++ALELFE MR D KP
Sbjct: 454 ALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKP 513
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
DD+TFV VLSACS+ GLVD G YF M +++ L P+ HY C+VD+L R G + EA
Sbjct: 514 DDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEF 573
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
I + I+ +W LLGACR + N ++G AGE++MEL S Y++L+ +Y +
Sbjct: 574 ---IESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTAL 630
Query: 555 GRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
GR ED +R+ + MK GV KEPGCSWI++ HVF+ GD HP +R + L ++
Sbjct: 631 GRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEILRLSKQM 690
Query: 615 ERE 617
+ E
Sbjct: 691 KDE 693
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 191/420 (45%), Gaps = 43/420 (10%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEA--LRVFHGM 109
++ N++I + ++ AK VFD + +DV++WN +I+GY G + + +F M
Sbjct: 43 IYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRM 102
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR---------DVASWTIMVNGLVREGR 160
+++ + +L+ +F + DV + ++N + G
Sbjct: 103 RADNILPNAHTFSGIFTAAS-NLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGL 161
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ EAR++FD+MP ++ W MI+GY G A ++F+ M
Sbjct: 162 LFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELM------------------ 203
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIV 277
RR + ++ F + S++S L V K+ H K S N +V
Sbjct: 204 RREEEDVNEF---------AFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALV 254
Query: 278 G-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + +++VFE+ ++ W+ MI G ++ + LK F +M +G +P
Sbjct: 255 TMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEF 314
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T VL CSD ++ G+Q+H +K+ + A++ MYA+ G + A F+ +
Sbjct: 315 TLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYL 374
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
D++ W S+I G +G E AL L+ RM++ P+++T VL ACS DQGR
Sbjct: 375 QQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGR 434
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT-VSNAMITMYARCGNIQSALL 391
P N + + L + +L GR +HAQ IK+A + ++N++I YA+C ++ A L
Sbjct: 5 PQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKL 64
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKA--LELFERMRLTDFKPDDITFVGVLSACS 447
F + D+ISWN +I G + G + +ELF+RMR + P+ TF G+ +A S
Sbjct: 65 VFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAAS 122
>gi|297837203|ref|XP_002886483.1| hypothetical protein ARALYDRAFT_338156 [Arabidopsis lyrata subsp.
lyrata]
gi|297332324|gb|EFH62742.1| hypothetical protein ARALYDRAFT_338156 [Arabidopsis lyrata subsp.
lyrata]
Length = 1243
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 204/655 (31%), Positives = 323/655 (49%), Gaps = 93/655 (14%)
Query: 15 KMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEV 74
++ +RD V W V+ R N+ N + +++S + A+E+
Sbjct: 348 RLLRRDHVLWKVLYRSSCLKCLYANSFSTSVSS-SLGFRATNKELNQMIRSGYIAEAREI 406
Query: 75 FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC---QRMD 131
F+ +E R++VTWN+MISGYV + +A ++F MP +DVV+WN +I V+C + ++
Sbjct: 407 FEKLEARNIVTWNTMISGYVKRREMTQARKLFDEMPERDVVTWNAMISGYVSCGGIRFLE 466
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
A F EM +RD SW M++G + RI EA LF+KMP ++ +W+ MI G+ NG
Sbjct: 467 EARKLFDEMPSRDSFSWNTMISGYAKNRRISEALLLFEKMPERNAVSWSAMITGFCHNGE 526
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRR----------------------------- 222
V A DLF++M +D +S L+ GL+ + R
Sbjct: 527 VNRAFDLFRRMPVKDSSSLCALVAGLIKNERLEEAAWVLGQYGSLDSGREDLVYAYNTLI 586
Query: 223 --------IDAAISYFKQMPETCEK----------------TWNSIISVLIRNGLVKEAH 258
++AA F Q+P+ C+ +WNS+I ++ G V A
Sbjct: 587 VGYGQRGQVEAARCLFDQIPDLCDDDDHGGAFRERFRRNVVSWNSMIKAYLKVGDVVSAR 646
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG------- 311
++ + SW +I GY + + A +F M RD WN+M+ G
Sbjct: 647 LLFDQMKDRDTISWNTMIDGYVHVSRMDDAFALFSEMPNRDAHSWNMMVSGYASVGNLEL 706
Query: 312 ------------------------ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
+N +E + F++M G PD T TS+L++ +
Sbjct: 707 ARHYFEKTPEKNIVSWNSIIAAYDKNKDYKEAVDVFIRMNIDGEKPDPHTLTSLLSVSTG 766
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI-HDIISWNS 406
L L LG Q+H +K V NA+ITMY+RCG I + F + + ++I+WN+
Sbjct: 767 LVNLRLGMQMHQIVVKTVIPD-VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNA 825
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
II G A+HG A +AL LF M+ P ITFV VL+AC++AGLVD+ + F M + Y
Sbjct: 826 IIGGYAFHGNASEALNLFWSMKCYGIHPSHITFVSVLNACAHAGLVDEAKEQFLSMMSVY 885
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
++P+ HY+ +V+++ G +EAM + I++ E TVWGALL ACRI+NN+ +
Sbjct: 886 KIEPQMEHYSSLVNVISGQGQFEEAMYV---IKSMPFEPDKTVWGALLDACRIYNNVGLA 942
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
+A E + LEP +S Y++L MY G ++A ++ M+ +KKE G SW+
Sbjct: 943 HVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 997
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 158/552 (28%), Positives = 235/552 (42%), Gaps = 129/552 (23%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERD---------- 51
+N RI EA LF+KMP+R+ V+W+ MI G+ NG ++ A LF +MP +D
Sbjct: 492 KNRRISEALLLFEKMPERNAVSWSAMITGFCHNGEVNRAFDLFRRMPVKDSSSLCALVAG 551
Query: 52 ---------------------------MFTYNTVIAGLMQSDNVQGAKEVFDGME----- 79
++ YNT+I G Q V+ A+ +FD +
Sbjct: 552 LIKNERLEEAAWVLGQYGSLDSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCDD 611
Query: 80 -----------VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQ 128
R+VV+WNSMI Y+ G + A +F M +D +SWN +I V+
Sbjct: 612 DDHGGAFRERFRRNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVS 671
Query: 129 RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD 188
RMD A + F EM RD SW +MV+G G + AR F+K P K++ +WN +IA Y
Sbjct: 672 RMDDAFALFSEMPNRDAHSWNMMVSGYASVGNLELARHYFEKTPEKNIVSWNSIIAAYDK 731
Query: 189 NGCVGVAEDLFQKMH-------DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
N A D+F +M+ LTS + GLVN R QM + KT
Sbjct: 732 NKDYKEAVDVFIRMNIDGEKPDPHTLTSLLSVSTGLVNLR-------LGMQMHQIVVKT- 783
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF-ELMTTRDV 300
I V + N L I Y GE+ + ++F E+ R+V
Sbjct: 784 -VIPDVPVHNAL----------------------ITMYSRCGEIMESRRIFDEMKLKREV 820
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
WN +I G + E L F MK G P + TF SVL C+ HA
Sbjct: 821 ITWNAIIGGYAFHGNASEALNLFWSMKCYGIHPSHITFVSVLNACA-----------HAG 869
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
+ A+ QF + M+++Y I+ + +SS+ ++I G G E+A
Sbjct: 870 LVDEAKEQFLS----MMSVY----KIEPQMEHYSSLV--------NVISG---QGQFEEA 910
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSA-HYTCVV 479
+ + + M F+PD + +L AC V + M L+P S+ Y +
Sbjct: 911 MYVIKSM---PFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSR---LEPESSTPYVLLY 964
Query: 480 DLLGRFGLIDEA 491
++ GL DEA
Sbjct: 965 NMYADMGLWDEA 976
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 203/636 (31%), Positives = 329/636 (51%), Gaps = 39/636 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLMQ 64
A+ +F MP+++ V+WN ++ G+ + G + + LF +M ++ FT +TV+ G
Sbjct: 283 AERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCAN 342
Query: 65 SDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
S N++ + V G E+ + ++ ++ Y GL +AL+VF + DVVSW+
Sbjct: 343 SGNLRAGQIVHSLAIRIGCELDEFISC-CLVDMYSKCGLAGDALKVFVRIEDPDVVSWSA 401
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
+I L + A FK M V + LV A L D + + A
Sbjct: 402 IITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSA-----ATDLGDLYYGESIHAC 456
Query: 180 -------------NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
N ++ Y+ G V +F+ +RDL SW L++G ++ D
Sbjct: 457 VCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTG 516
Query: 227 ISYFKQM-PETCEKTWNSIISVLIRNG------LVKEAHSYLEKYPY-SNIASWTNVIVG 278
+ F QM E + IS+L L K+ H+ + K N T ++
Sbjct: 517 LRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDM 576
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + + A +F + RD+ W V++ G ++ GE+ +K F+QM+ G P+ T
Sbjct: 577 YAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTL 636
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
S L+ CS + TLD GRQ+H+ AIK ++ V++A++ MYA+CG ++ A + F +
Sbjct: 637 ASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVS 696
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
D +SWN+IICG + HG KAL+ FE M PD++TF+GVLSACS+ GL+++G+ +
Sbjct: 697 RDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKH 756
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F+ + Y + P HY C+VD+LGR G E + + E++ + + +W +LGAC+
Sbjct: 757 FNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMK---LTSNVLIWETVLGACK 813
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
+H NI+ GE A ++ ELEP Y++L+ M+ + G +D + A M GVKKEPGC
Sbjct: 814 MHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGC 873
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
SW+++N HVFLS D SHPK + L LH ++
Sbjct: 874 SWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKL 909
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 143/532 (26%), Positives = 252/532 (47%), Gaps = 33/532 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGLMQ 64
A +F ++P+RD V+W +I G+ G+ A+ LF +M E + FTY T +
Sbjct: 182 ACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSM 241
Query: 65 SDNVQGAKEVF-DGMEV---RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
+++ K+V + ++V D+ ++++ Y G + A RVF MP ++ VSWN +
Sbjct: 242 CLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNAL 301
Query: 121 IGALVNCQRMDLAESYFKEMGARDV--ASWTIMV-------NGLVREGRIVEARKLFDKM 171
+ + + F M ++ + +T+ +G +R G+IV + +
Sbjct: 302 LNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGC 361
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
+ + L + Y G G A +F ++ D D+ SW +I L + A FK
Sbjct: 362 ELDEFISCCL-VDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFK 420
Query: 232 QMPETC----EKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFEMG 283
+M + + T S++S G + + H+ + KY + + N +V Y ++G
Sbjct: 421 RMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIG 480
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
V +VFE T RD+ WN ++ G +N+ + GL+ F QM G +P+ TF S+L
Sbjct: 481 SVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILR 540
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
CS L +DLG+Q+HAQ +K + + V A++ MYA+ ++ A F+ + D+ +
Sbjct: 541 SCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFA 600
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
W I+ G A G EKA++ F +M+ KP++ T LS CS +D GR M
Sbjct: 601 WTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHS-MA 659
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV-WGALL 514
K + +VD+ + G +++A E+ DG+ TV W ++
Sbjct: 660 IKAGQSGDMFVASALVDMYAKCGCVEDA-----EVVFDGLVSRDTVSWNTII 706
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 129/566 (22%), Positives = 225/566 (39%), Gaps = 92/566 (16%)
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVS-----WNLVIGALVNCQRMDLAESYFKEM 140
++ M+ G ++E + HG +K ++ WN ++ C + A F E+
Sbjct: 131 YSGMLRTCASKGDLNEG-KAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEI 189
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG--------------- 185
RDV SWT ++ G V EG A LF +M + V+A A
Sbjct: 190 PERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGK 249
Query: 186 ------------------------YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
Y G + +AE +F M ++ SW L+NG
Sbjct: 250 QVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMG 309
Query: 222 RIDAAISYFKQMPET----CEKTWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTN 274
+ ++ F +M + + T ++++ +G ++ HS + +
Sbjct: 310 DAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISC 369
Query: 275 VIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
+V Y + G G A+KVF + DV W+ +I L + E + F +M+ SG P
Sbjct: 370 CLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIP 429
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+ T S+++ +DL L G IHA K TV NA++TMY + G++Q F
Sbjct: 430 NQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVF 489
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ D+ISWN+++ G + + L +F +M F P+ TF+ +L +CS VD
Sbjct: 490 EATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVD 549
Query: 454 QGR-YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN---------------- 496
G+ + +KN L T +VD+ + +++A + N
Sbjct: 550 LGKQVHAQIVKNS--LDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAG 607
Query: 497 ---------------EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
+++ +G++ + + L C + G M ++ S
Sbjct: 608 YAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQL--HSMAIKAGQS 665
Query: 542 G---VYLILTEMYLSCGRREDAKRIF 564
G V L +MY CG EDA+ +F
Sbjct: 666 GDMFVASALVDMYAKCGCVEDAEVVF 691
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 204/459 (44%), Gaps = 42/459 (9%)
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
T G + EG+ + + + + D WN ++ Y G A +F ++ +RD+
Sbjct: 137 TCASKGDLNEGKAIHGQVIKSGINP-DSHLWNSLVNVYAKCGSANYACKVFGEIPERDVV 195
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSII---SVLIRNGLVKEAHSYL 261
SW LI G V A++ F +M E E T+ + + S+ + K+ H+
Sbjct: 196 SWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEA 255
Query: 262 EKY-PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
K +S++ + ++ Y + GE+ A +VF M ++ WN ++ G + E+ L
Sbjct: 256 IKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVL 315
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F +M S + T ++VL C++ L G+ +H+ AI+I +S ++ MY
Sbjct: 316 NLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMY 375
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
++CG AL F + D++SW++II L G + +A E+F+RMR + P+ T
Sbjct: 376 SKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLA 435
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKY---------------FLQPRSAHYTCVV------ 479
++SA + G + G C+ KY +++ S C V
Sbjct: 436 SLVSAATDLGDLYYGESIHACV-CKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTN 494
Query: 480 -DLLGRFGLI---------DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EI 528
DL+ L+ D + + N++ A+G + + ++L +C +++ +G ++
Sbjct: 495 RDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV 554
Query: 529 AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ V N V L +MY EDA+ IF ++
Sbjct: 555 HAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL 593
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 115/266 (43%), Gaps = 31/266 (11%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
++ +L C+ L+ G+ IH Q IK N + + N+++ +YA+CG+ A F +P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS---------- 447
D++SW ++I G GY A+ LF MR + ++ T+ L ACS
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250
Query: 448 -YAGLVDQGRY------------YFDC----MKNKYFL---QPRSAHYTCVVDLLGRFGL 487
+A + G + Y C + + FL + + + +++ + G
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLI 546
++ +NL + I S +L C N++ G+I + + + +
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCC 370
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGV 572
L +MY CG DA ++F ++++ V
Sbjct: 371 LVDMYSKCGLAGDALKVFVRIEDPDV 396
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 151/356 (42%), Gaps = 63/356 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
M+ +Q+ +F+ RD ++WN ++ G+ N D + +FNQM +M+T+
Sbjct: 477 MKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFI 536
Query: 57 TVIAGLMQSDNV-----------------------------------QGAKEVFDGMEVR 81
+++ +V + A+ +F+ + R
Sbjct: 537 SILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKR 596
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG-ALVNCQRMDLAES----- 135
D+ W +++GY +G ++A++ F M + V + +L C R+ +S
Sbjct: 597 DLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLH 656
Query: 136 --YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
K + D+ + +V+ + G + +A +FD + ++D +WN +I GY +G G
Sbjct: 657 SMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGG 716
Query: 194 VAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT-----WNSI 244
A F+ M D D ++ +++ + I+ +F + + T + +
Sbjct: 717 KALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACM 776
Query: 245 ISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVI-----VGYFEMGEVGSAIKVFEL 294
+ +L R G E S++E+ SN+ W V+ G E GE +A+K+FEL
Sbjct: 777 VDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGER-AAMKLFEL 831
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 196/645 (30%), Positives = 339/645 (52%), Gaps = 37/645 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
+R + A+ +F MP RDTVT+N +I G+ + G ++A+ +F +M D T +
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248
Query: 57 TVIAGLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
+++A ++Q ++ F D + S++ YV G ++ AL +F+
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308
Query: 113 DVVSWNLVIGALVNCQRMDLAESY--FKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+VV WNL++ A Q DLA+S+ F +M A + ++R L ++
Sbjct: 309 NVVLWNLMLVAF--GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ 366
Query: 171 MPA--------KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ + D+ ++I Y G + A + + + ++D+ SW +I G V
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC 426
Query: 223 IDAAISYFKQMPETCEKTWNSIISVL-----------IRNGLVKEAHSYLEKYPYSNIAS 271
A++ FK+M + C W I + +R GL A Y+ Y +++
Sbjct: 427 CKDALAAFKEM-QKC-GIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYS-GDVSI 483
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
W ++ Y G + A FE + +D WN ++ G ++ L EE LK F++M +SG
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGV 543
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
+ TF S L+ ++L + G+QIHA+ IK + T V NA+I++Y +CG+ + A +
Sbjct: 544 KHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKM 603
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
EFS + + +SWN+II + HG +AL+LF++M+ KP+D+TF+GVL+ACS+ GL
Sbjct: 604 EFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGL 663
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
V++G YF M ++Y ++PR HY CV+D+ GR G +D A + E+ I VW
Sbjct: 664 VEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEM---PIAADAMVWR 720
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
LL AC++H NI+VGE A + ++ELEP++S Y++L+ Y + + ++ M++ G
Sbjct: 721 TLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRG 780
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
V+KEPG SWI++ + H F GD HP ++ L +++ + +
Sbjct: 781 VRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAK 825
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 138/555 (24%), Positives = 240/555 (43%), Gaps = 66/555 (11%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
AK V G+ +V N +I Y NGL+ A RVF + +D VSW ++
Sbjct: 66 AKAVTRGLGKYRIVG-NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLG 124
Query: 131 DLAESYFKEMGARDVASWTIMVNG---------LVREGRIVEARKLFDKMPAKDVQAWNL 181
+ A +++M V +++ L +GR++ A+ + ++ N
Sbjct: 125 EEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQG-YKHGFCSEIFVGNA 183
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PE 235
+I YL G +AE +F M RD ++ LI+G + A+ F++M P+
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 236 TCEKTWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKV 291
T +S+++ G +++ HSYL K S+ ++ Y + G+V +A+ +
Sbjct: 244 CV--TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 292 FELMTTRDVTVWNVMIFGLGE-NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
F +V +WN+M+ G+ NDL + + F QM+ +G P+ T+ +L C+
Sbjct: 302 FNSSDRTNVVLWNLMLVAFGQINDLA-KSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
+DLG QIH+ ++K VS +I MY++ G ++ A + D++SW S+I G
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-----RYY------- 458
H + AL F+ M+ PD+I +S C+ + QG R Y
Sbjct: 421 YVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGD 480
Query: 459 ---FDCMKNKYFLQPR---------------SAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
++ + N Y R + +V + GL +EA+ + +
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQ 540
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM------ELEPNNSGVYLILTEMYLSC 554
G++ + + + L A IK G+ RV+ E E N+ L +Y C
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA-----LISLYGKC 595
Query: 555 GRREDAKRIFAQMKE 569
G EDAK F++M E
Sbjct: 596 GSFEDAKMEFSEMSE 610
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 101/249 (40%), Gaps = 49/249 (19%)
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+IHA+A+ ++ V N +I +Y++ G + A F + D +SW +++ G A +G
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR------------------- 456
E+AL L+ +M P VLS+C+ A L QGR
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 457 ----YYFDC----MKNKYFLQ-PR--SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
Y C + + F P + + ++ + G + A+ + E++ G+
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 506 SPTVWGALLGAC----------RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
+LL AC ++H+ + I+ + +ME L ++Y+ CG
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS---------LLDLYVKCG 293
Query: 556 RREDAKRIF 564
E A IF
Sbjct: 294 DVETALVIF 302
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 196/645 (30%), Positives = 339/645 (52%), Gaps = 37/645 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
+R + A+ +F MP RDTVT+N +I G+ + G ++A+ +F +M D T +
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248
Query: 57 TVIAGLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
+++A ++Q ++ F D + S++ YV G ++ AL +F+
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308
Query: 113 DVVSWNLVIGALVNCQRMDLAESY--FKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+VV WNL++ A Q DLA+S+ F +M A + ++R L ++
Sbjct: 309 NVVLWNLMLVAF--GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ 366
Query: 171 MPA--------KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ + D+ ++I Y G + A + + + ++D+ SW +I G V
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC 426
Query: 223 IDAAISYFKQMPETCEKTWNSIISVL-----------IRNGLVKEAHSYLEKYPYSNIAS 271
A++ FK+M + C W I + +R GL A Y+ Y +++
Sbjct: 427 CKDALAAFKEM-QKC-GIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYS-GDVSI 483
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
W ++ Y G + A FE + +D WN ++ G ++ L EE LK F++M +SG
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGV 543
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
+ TF S L+ ++L + G+QIHA+ IK + T V NA+I++Y +CG+ + A +
Sbjct: 544 KHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKM 603
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
EFS + + +SWN+II + HG +AL+LF++M+ KP+D+TF+GVL+ACS+ GL
Sbjct: 604 EFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGL 663
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
V++G YF M ++Y ++PR HY CV+D+ GR G +D A + E+ I VW
Sbjct: 664 VEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEM---PIAADAMVWR 720
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
LL AC++H NI+VGE A + ++ELEP++S Y++L+ Y + + ++ M++ G
Sbjct: 721 TLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRG 780
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
V+KEPG SWI++ + H F GD HP ++ L +++ + +
Sbjct: 781 VRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAK 825
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 138/555 (24%), Positives = 240/555 (43%), Gaps = 66/555 (11%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
AK V G+ +V N +I Y NGL+ A RVF + +D VSW ++
Sbjct: 66 AKAVTRGLGKYRIVG-NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLG 124
Query: 131 DLAESYFKEMGARDVASWTIMVNG---------LVREGRIVEARKLFDKMPAKDVQAWNL 181
+ A +++M V +++ L +GR++ A+ + ++ N
Sbjct: 125 EEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQG-YKHGFCSEIFVGNA 183
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PE 235
+I YL G +AE +F M RD ++ LI+G + A+ F++M P+
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 236 TCEKTWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKV 291
T +S+++ G +++ HSYL K S+ ++ Y + G+V +A+ +
Sbjct: 244 CV--TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 292 FELMTTRDVTVWNVMIFGLGE-NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
F +V +WN+M+ G+ NDL + + F QM+ +G P+ T+ +L C+
Sbjct: 302 FNSSDRTNVVLWNLMLVAFGQINDLA-KSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
+DLG QIH+ ++K VS +I MY++ G ++ A + D++SW S+I G
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-----RYY------- 458
H + AL F+ M+ PD+I +S C+ + QG R Y
Sbjct: 421 YVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGD 480
Query: 459 ---FDCMKNKYFLQPR---------------SAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
++ + N Y R + +V + GL +EA+ + +
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQ 540
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM------ELEPNNSGVYLILTEMYLSC 554
G++ + + + L A IK G+ RV+ E E N+ L +Y C
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA-----LISLYGKC 595
Query: 555 GRREDAKRIFAQMKE 569
G EDAK F++M E
Sbjct: 596 GSFEDAKMEFSEMSE 610
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 101/249 (40%), Gaps = 49/249 (19%)
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+IHA+A+ ++ V N +I +Y++ G + A F + D +SW +++ G A +G
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR------------------- 456
E+AL L+ +M P VLS+C+ A L QGR
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 457 ----YYFDC----MKNKYFLQ-PR--SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
Y C + + F P + + ++ + G + A+ + E++ G+
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 506 SPTVWGALLGAC----------RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
+LL AC ++H+ + I+ + +ME L ++Y+ CG
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS---------LLDLYVKCG 293
Query: 556 RREDAKRIF 564
E A IF
Sbjct: 294 DVETALVIF 302
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 208/614 (33%), Positives = 329/614 (53%), Gaps = 63/614 (10%)
Query: 35 GFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDV----VTWNSMI 90
G L A+ LF + + + F +NT+I G S + GA + + M + V T+ ++
Sbjct: 80 GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLL 139
Query: 91 SGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTI 150
G E ++ HG LK + L F T
Sbjct: 140 KSCAKVGATQEGKQI-HGHVLK-----------------LGLESDPFVH---------TS 172
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
++N + G + A +F K +D ++ +I GY GC+ A LF+++ RD SW
Sbjct: 173 LINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSW 232
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLVKEAH---SYLEK 263
+I G S R + A+++F++M E T +++S ++G ++ + S++E
Sbjct: 233 NAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIED 292
Query: 264 YPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ SN+ +I Y + G++ A +FE + +D+ WNVMI G + +E L
Sbjct: 293 HGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALAL 352
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-----AMI 377
F +M++S P++ TF S+L C+ L LDLG+ IHA K +F ++N ++I
Sbjct: 353 FRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDK----KFLGLTNTSLWTSLI 408
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
MYA+CGNI++A F+ + + SWN++I GLA HG+A ALELF +MR F+PDDI
Sbjct: 409 DMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDI 468
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN- 496
TFVGVLSACS+AGLV+ GR F M Y + P+ HY C++DLLGR GL DEA L+
Sbjct: 469 TFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKN 528
Query: 497 -EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
E++ DG +WG+LLGACR+H N+++GE A + + ELEP N G Y++L+ +Y + G
Sbjct: 529 MEMKPDG-----AIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAG 583
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
R +D RI ++ + G+KK PGCS I+++ H FL GD H + + +L+ + +E
Sbjct: 584 RWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLE 643
Query: 616 R--------EILFD 621
+ E+L+D
Sbjct: 644 KAGHVPDTSEVLYD 657
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 141/573 (24%), Positives = 242/573 (42%), Gaps = 97/573 (16%)
Query: 18 QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
+ D +I Y +NG L A +F++ RD ++ +I G + A+ +F+
Sbjct: 164 ESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEE 223
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV----SWNLVIGALVNCQRMDLA 133
+ VRD V+WN+MI+GY +G +EAL F M +V + V+ A ++L
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELG 283
Query: 134 ---ESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
S+ ++ G + S +VN L+ + G + +AR LF+ + KD+ +WN+MI GY
Sbjct: 284 NWVRSWIEDHG---LGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGY 340
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIIS 246
A LF+KM ++ E + T+ SI+
Sbjct: 341 SHMNSYKEALALFRKMQQSNV---------------------------EPNDVTFVSILP 373
Query: 247 VLIRNG---LVKEAHSYLEK--YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
G L K H+Y++K +N + WT++I Y + G + +A +VF M + +
Sbjct: 374 ACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLG 433
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN MI GL + L+ F QM++ G PD+ TF VL+ CS ++LGRQ +
Sbjct: 434 SWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFS-- 491
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
+M+ Y +Q + +I L G ++A
Sbjct: 492 -------------SMVEDYDISPKLQ---------------HYGCMIDLLGRAGLFDEAE 523
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS-AHYTCVVD 480
L + M + KPD + +L AC G V+ G + K+ + L+P + Y + +
Sbjct: 524 ALMKNMEM---KPDGAIWGSLLGACRVHGNVELGEF---AAKHLFELEPENPGAYVLLSN 577
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE-IAGERVMELEPN 539
+ G D+ + ++ G++ P G I + V E + G++V E
Sbjct: 578 IYATAGRWDDVARIRTKLNDKGMKKVP-------GCSSIEVDSVVHEFLVGDKVHE---Q 627
Query: 540 NSGVYLILTE---MYLSCGRREDAKRIFAQMKE 569
+ +Y +L E + G D + M E
Sbjct: 628 SQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDE 660
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 164/386 (42%), Gaps = 68/386 (17%)
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGS---AIKVFELMTTRDVTVWNVMIFGL 310
+K+ HS + K N + ++ + + G+ A+ +FE + + +WN MI G
Sbjct: 48 LKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGN 107
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+ + F+V+M G P++ TF +L C+ + G+QIH +K+
Sbjct: 108 SLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDP 167
Query: 371 TVSNAMITMYARCGNIQSALLEFSS-------------------------------VPIH 399
V ++I MYA+ G + A L FS +P+
Sbjct: 168 FVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR 227
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
D +SWN++I G A G E+AL F+ M+ + P++ T V VLSAC+ +G ++ G +
Sbjct: 228 DAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVR 287
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLID------------------------------ 489
+++ + L ++D+ + G +D
Sbjct: 288 SWIED-HGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSY 346
Query: 490 -EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYLI 546
EA+ L +++ +E + + ++L AC + +G+ + + L N+ ++
Sbjct: 347 KEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTS 406
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGV 572
L +MY CG E AK++FA MK +
Sbjct: 407 LIDMYAKCGNIEAAKQVFAGMKPKSL 432
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 162/387 (41%), Gaps = 95/387 (24%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N + A+ +F K RD V++ +I GY G LD+A LF ++P RD ++N +IAG
Sbjct: 179 QNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAG 238
Query: 62 LMQSDNVQGAKEVFDGMEVRDVV--------------------------TW--------- 86
QS + A F M+ +V +W
Sbjct: 239 YAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSN 298
Query: 87 ----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM-- 140
N++I Y G +D+A +F G+ KD++SWN++IG + A + F++M
Sbjct: 299 LRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQ 358
Query: 141 --------------------GARDVAS------------------WTIMVNGLVREGRIV 162
GA D+ WT +++ + G I
Sbjct: 359 SNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIE 418
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLV 218
A+++F M K + +WN MI+G +G +A +LF++M D D ++ +++
Sbjct: 419 AAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACS 478
Query: 219 NSRRIDAAISYFKQMPETCE-----KTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASW 272
++ ++ F M E + + + +I +L R GL EA + ++ + A W
Sbjct: 479 HAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIW 538
Query: 273 TNV-----IVGYFEMGEVGSAIKVFEL 294
++ + G E+GE +A +FEL
Sbjct: 539 GSLLGACRVHGNVELGEF-AAKHLFEL 564
>gi|296090396|emb|CBI40215.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/533 (35%), Positives = 293/533 (54%), Gaps = 16/533 (3%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R++EA+ +F++M QRD V+WN MI GY +NG +D A LF+ +++ T+ ++ G
Sbjct: 51 RLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTG 110
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ ++ A+EVF+ M R+VV+WN+MISGYV NG + A ++F MP K+V SWN V+
Sbjct: 111 YAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVV 170
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM-PAKDVQAWN 180
+C RM A F +M R+ SW +M++G V EA +F KM ++ +W
Sbjct: 171 TGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTRNEYSWT 230
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDR-DLTSWKQLINGLVNSRRIDAAISYFKQMPET--- 236
MIA + G + A L++++ ++ + SW +I G V + A+ ++ +
Sbjct: 231 TMIAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFVQNEESREALELLIELHRSGSV 290
Query: 237 -CEKTWNSIISVLIRNGLV---KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKV 291
+ ++ S +S G V + HS K N +I Y + G V V
Sbjct: 291 PSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHV 350
Query: 292 FEL--MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
F M RDV W +I + GE L F+ M G P+ T TS+L+ C +L
Sbjct: 351 FRTIRMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLG 410
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
+ LG Q HA K+ + F V N++ITMY +CG + F +P HD+I+WN+++
Sbjct: 411 AIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLV 469
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
G A +G ++A+++FE+M + PD ++F+GVL ACS+AGLVD+G +F+ M KY +
Sbjct: 470 GCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIM 529
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
P HYTC+VDLLGR G + EA L+ + ++ +W ALLGACRIH N
Sbjct: 530 PLVYHYTCMVDLLGRAGYLSEAEALIENM---PVKPDSVIWEALLGACRIHRN 579
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 218/418 (52%), Gaps = 35/418 (8%)
Query: 45 NQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALR 104
+ P+ +F NT I L + V+ A+ VF+ M RDVV+WNSMI+GY NG +DEA
Sbjct: 32 QETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARL 91
Query: 105 VFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEA 164
+F K++ +W +++ R++ A F+ M R+V SW M++G V+ G + A
Sbjct: 92 LFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNA 151
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
RKLFD+MP K+V +WN ++ GY + A +LF +M +R+ SW +I+G V+
Sbjct: 152 RKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYW 211
Query: 225 AAISYFKQMPET-CEKTWNSIISVLIRNGLVKEAHSYLEKYP-YSNIASWTNVIVGYFEM 282
A F +M T E +W ++I+ + G + +A E+ P +N ASW +I G+
Sbjct: 212 EAWDVFVKMCRTRNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFV-- 269
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
+N+ E L+ +++ SG P +++FTS L
Sbjct: 270 -----------------------------QNEESREALELLIELHRSGSVPSDSSFTSAL 300
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV--PIHD 400
+ C+++ +++GR IH+ AIK + V N +I+MYA+CGN++ F ++ P D
Sbjct: 301 SACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRMPKRD 360
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
++SW +II G+ E AL+LF M KP+ +T +LSAC G + G +
Sbjct: 361 VVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQF 418
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 196/456 (42%), Gaps = 79/456 (17%)
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
+ L R GR+ EAR++F++M +DV +WN MI GY NG V A LF +++ +W
Sbjct: 46 IQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWT 105
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
L+ G RI+ A F+ M E +WN++IS ++NG +K A ++ P N+AS
Sbjct: 106 ILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVAS 165
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
W +V+ GY + A ++F+ M R+ W VMI G E FV+M +
Sbjct: 166 WNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRT-- 223
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
RN+++ + MI +A+CG + A+
Sbjct: 224 ----------------------------------RNEYSWTT--MIAAFAQCGRLDDAIQ 247
Query: 392 EFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
+ VP + SW ++I G + + +ALEL + + P D +F LSAC+ G
Sbjct: 248 LYERVPEQTNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIG 307
Query: 451 LVDQGRYYFD------CMKNKYFLQ------------------------PRS--AHYTCV 478
V+ GR C N Y + P+ +T +
Sbjct: 308 DVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRMPKRDVVSWTAI 367
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
+ + G + A++L ++ A GI+ + +LL AC IK+GE + +L
Sbjct: 368 ISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGF 427
Query: 539 NNSGVYLI----LTEMYLSCGRREDAKRIFAQMKEN 570
+ +L L MY CG ED +F +M E+
Sbjct: 428 DT---FLFVGNSLITMYFKCG-YEDGFCVFEEMPEH 459
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 195/436 (44%), Gaps = 23/436 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N ++ A+ LFD+MP+++ +WN ++ GY + A LF+QMPER+ ++ +I+
Sbjct: 143 VQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMIS 202
Query: 61 GLMQSDNVQGAKEVFDGM-EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-DVVSWN 118
G + + A +VF M R+ +W +MI+ + G +D+A++++ +P + + SW
Sbjct: 203 GYVHISDYWEAWDVFVKMCRTRNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTNSASWA 262
Query: 119 LVIGALVNCQR----MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
+I V + ++L + +S+T ++ G + R +
Sbjct: 263 AMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKT 322
Query: 175 DVQ----AWNLMIAGYLDNGCVGVAEDLFQ--KMHDRDLTSWKQLINGLVNSRRIDAAIS 228
Q N +I+ Y G V +F+ +M RD+ SW +I+ V + + A+
Sbjct: 323 GCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRMPKRDVVSWTAIISAYVQAGHGEVALD 382
Query: 229 YFKQMPETCEK----TWNSIISVLIRNGLVK---EAHSYLEKYPYSNIASWTN-VIVGYF 280
F M K T S++S G +K + H+ + K + N +I YF
Sbjct: 383 LFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYF 442
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G VFE M D+ WN ++ G +N LG+E +K F QM+ G PD +F
Sbjct: 443 KCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLG 501
Query: 341 VLTICSDLPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
VL CS +D G ++ K M+ + R G + A ++P+
Sbjct: 502 VLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVK 561
Query: 400 -DIISWNSIICGLAYH 414
D + W +++ H
Sbjct: 562 PDSVIWEALLGACRIH 577
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 196/642 (30%), Positives = 335/642 (52%), Gaps = 39/642 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTVIAGLM 63
+ A LF P V ++ Y G L A+ F+ +P+ RD +N VI+
Sbjct: 75 LPAAATLFRADPC--PVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYA 132
Query: 64 QSDNVQGAKEVF-----DGMEVRDVVTWNSMIS--GYV-------CNGLIDEALRVFHGM 109
++ + A VF G D ++ +++S G++ C L L+ G
Sbjct: 133 RASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGG 192
Query: 110 PLKDVVSWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVREGRIVEARK 166
L VS N ++ + C+ ++ A EM +D +WT MV G VR G + AR
Sbjct: 193 VLS--VS-NALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARS 249
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNS-- 220
+F+++ K WN MI+GY+ +G V A +LF++M D ++ +++ N+
Sbjct: 250 VFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGF 309
Query: 221 ----RRIDAAISYFKQ--MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTN 274
+ + I+ + +PE N+++++ + G + A + ++ SW
Sbjct: 310 FAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNT 369
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ GY E + A++VFE M ++ W VM+ G E+ LK F +M+ P
Sbjct: 370 ILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPC 429
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ T+ ++ C +L +L G+Q+H +++ + NA+ITMYARCG ++ A L F
Sbjct: 430 DYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFL 489
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+P D +SWN++I L HG+ +ALELF+RM PD I+F+ VL+AC+++GLVD+
Sbjct: 490 VMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDE 549
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
G YF+ MK + + P HYT ++DLLGR G I EA +L I+ E +P++W A+L
Sbjct: 550 GFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDL---IKTMPFEPTPSIWEAIL 606
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
CR ++++G A +++ ++ P + G Y++L+ Y + GR DA R+ M++ GVKK
Sbjct: 607 SGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKK 666
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
EPGCSWI+ + HVF+ GD+ HP+ H++ L ++ + +
Sbjct: 667 EPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRK 708
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 208/642 (32%), Positives = 340/642 (52%), Gaps = 34/642 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYN 56
++ I +A+ +FD M +RD +W VMI G ++G A LF QM ER ++ TY
Sbjct: 178 KSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQM-ERGGCLPNLTTYL 236
Query: 57 TVI--AGLMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
+++ + + + ++ KEV + D+ N++I Y G ID+A VF GM
Sbjct: 237 SILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMC 296
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGR---IVE 163
+DV+SWN +IG L A + F +M D ++ ++N V G + E
Sbjct: 297 DRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKE 356
Query: 164 ARKLFDKMP-AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
K ++ D++ + + Y+ G + A+ +F K+ R++T+W +I G+ +
Sbjct: 357 VHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKC 416
Query: 223 IDAAISYFKQMP-ETCEKTWNSIISVLIRN------GLVKEAHSYLEKYPYSNIASWTNV 275
A+S F QM E + +++L N VKE HSY ++ +
Sbjct: 417 GREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNAL 476
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ Y + G A +VF+ M R+VT W VMI GL ++ G E F+QM G PD
Sbjct: 477 VHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDA 536
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
T+ S+L+ C+ L+ +++H+ A+ V NA++ MYA+CG++ A F
Sbjct: 537 TTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDD 596
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+ D+ SW +I GLA HG AL+LF +M+L FKP+ +FV VLSACS+AGLVD+G
Sbjct: 597 MLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEG 656
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
R F + Y ++P HYTC+VDLLGR G ++EA + + + IE WGALLG
Sbjct: 657 RRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMP---IEPGDAPWGALLG 713
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
AC + N+++ E A + ++L+P ++ Y++L+ +Y + G E + + M+ G++KE
Sbjct: 714 ACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKE 773
Query: 576 PGCSWIQINDGGHVFLSGDSSHPK----FHRLRYLLNLLHTE 613
PG SWI++++ H F+ GD+SHP+ + +L+ L+ L E
Sbjct: 774 PGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAE 815
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 163/603 (27%), Positives = 276/603 (45%), Gaps = 58/603 (9%)
Query: 27 MIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAGLMQSDNVQGAKEVF-----DG 77
MI GY + G+ ++AM +++QM + + TY +++ +++ K++ G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF 137
+ DV ++++ YV G ID+A +F M ++V+SW ++IG L + R A F
Sbjct: 61 FQ-SDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119
Query: 138 KEMGAR----DVASWTIMVNGLVREGRIVEARKLFDKMP----AKDVQAWNLMIAGYLDN 189
+M + ++ ++N G + +++ A D++ N ++ Y +
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE-TCEKTWNSIISVL 248
G + A +F M +RD+ SW +I GL R A S F QM C + +S+L
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239
Query: 249 IRNGL--------VKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+ + VKE H + K + S++ +I Y + G + A VF+ M RD
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD 299
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
V WN MI GL +N G E F++M++ G PD+ T+ S+L + +++H
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHK 359
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
A+++ V +A + MY RCG+I A L F + + ++ +WN++I G+A +
Sbjct: 360 HAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGRE 419
Query: 420 ALELFERMRLTDFKPDDITFVGVLSA-------------CSY---AGLVDQG------RY 457
AL LF +MR F PD TFV +LSA SY AGLVD
Sbjct: 420 ALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHM 479
Query: 458 YFDCMKNKY-------FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
Y C Y ++ +T ++ L + G EA +L ++ +GI T +
Sbjct: 480 YAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTY 539
Query: 511 GALLGACRIHNNIK-VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
++L AC ++ V E+ V ++ V L MY CG +DA+R+F M E
Sbjct: 540 VSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLE 599
Query: 570 NGV 572
V
Sbjct: 600 RDV 602
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 169/642 (26%), Positives = 284/642 (44%), Gaps = 78/642 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
++ I +AQ +FDKM +R+ ++W VMI G G A F QM + +TY
Sbjct: 76 VKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYV 135
Query: 57 TVIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+++ + ++ KEV G+ + D+ N+++ Y +G ID+A VF GM
Sbjct: 136 SILNANASAGALEWVKEVHSHAVNAGLAL-DLRVGNALVHMYAKSGSIDDARVVFDGMVE 194
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGA----RDVASWTIMVNG-LVREGRIVEARK 166
+D+ SW ++IG L R A S F +M ++ ++ ++N + +E K
Sbjct: 195 RDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVK 254
Query: 167 LFDKMPAK-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
K K D++ N +I Y G + A +F M DRD+ SW +I GL +
Sbjct: 255 EVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNG 314
Query: 222 RIDAAISYFKQMPETC----EKTWNSIISVLIRNGL---VKEAHSY-LEKYPYSNIASWT 273
A + F +M + T+ S+++ + G VKE H + +E S++ +
Sbjct: 315 CGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGS 374
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
+ Y G + A +F+ + R+VT WN MI G+ + G E L F+QM+ G P
Sbjct: 375 AFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFP 434
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D TF ++L+ L+ +++H+ AI V NA++ MYA+CGN A F
Sbjct: 435 DATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDL-RVGNALVHMYAKCGNTMYAKQVF 493
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS------ 447
+ ++ +W +I GLA HG +A LF +M PD T+V +LSAC+
Sbjct: 494 DDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALE 553
Query: 448 ---------------------------YA--GLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
YA G VD R FD M L+ +T +
Sbjct: 554 WVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDM-----LERDVYSWTVM 608
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE---IAGERVME 535
+ L + G +A++L +++ +G + + + A+L AC + G ++ +
Sbjct: 609 IGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYG 668
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
+EP Y + ++ G+ E+AK M EPG
Sbjct: 669 IEPTMEH-YTCMVDLLGRAGQLEEAKHFILNM-----PIEPG 704
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 199/630 (31%), Positives = 320/630 (50%), Gaps = 41/630 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R + +A+ +FD MP R+T ++N ++ + G D+A+ LF +P+ D +YN V+A
Sbjct: 62 RLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQCSYNAVVAA 121
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRV---FHGMPLKDVVSWN 118
L Q A M D V + + ++A R H + K +
Sbjct: 122 LAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSD 181
Query: 119 LVIG-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
+ IG ALV+ C+R + A+ F M R++ SW ++ + G + EA LF +M
Sbjct: 182 VYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMK 241
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDL-FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+ +A + + C G+A +++H R + S + + ++N+ +D
Sbjct: 242 DGFVPDEVTLASVM-SACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVD-------- 292
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
M C +TW EA ++ ++ S T++I GY + VG A VF
Sbjct: 293 MYAKCGRTW--------------EAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVF 338
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
M ++V WNV+I N EE L+ FV++K P + T+ +VL C++L L
Sbjct: 339 LQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQ 398
Query: 353 LGRQIHAQAIK------IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
LG+Q H +K V N+++ MY + G+I F + D +SWN+
Sbjct: 399 LGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNA 458
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
+I G A +G A+ AL LFERM ++ +PD +T +GVLSAC ++GLV +GR YF M +
Sbjct: 459 MIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDH 518
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
+ P HYTC++DLLGR G + E L+ + +E +W +LLGACR+H NI +G
Sbjct: 519 GIIPTRDHYTCMIDLLGRAGHLKEVEELIENM---PMEPDAVLWASLLGACRLHKNIDMG 575
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
E A ++ EL+P+NSG Y++L+ MY G+ D R+ MK GV K+PGCSWI+I
Sbjct: 576 EWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIEIGRK 635
Query: 587 GHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+VFL+ D+ HP + + L ++ ++ R
Sbjct: 636 VNVFLARDNIHPCRNEIHDTLRIIQMQMSR 665
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 43/205 (20%)
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
T + N +++ YAR G++ A F +P + S+N+++ A G A+ AL LF +
Sbjct: 50 TFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAI-- 107
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
PD P Y VV L + G
Sbjct: 108 ----PD----------------------------------PDQCSYNAVVAALAQHGRGG 129
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--IL 547
+A+ L + AD ++ + + L AC + GE V + + S VY+ L
Sbjct: 130 DALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTK-SSHGSDVYIGTAL 188
Query: 548 TEMYLSCGRREDAKRIFAQMKENGV 572
+MY C R E+A+++F M E +
Sbjct: 189 VDMYAKCERPEEAQKVFDAMPERNI 213
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 14/146 (9%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM---PER-DMFTYN 56
++ I + +F++M RD V+WN MI GY +NG +A+ LF +M ER D T
Sbjct: 433 LKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMI 492
Query: 57 TVIAGLMQSDNVQGAKEVFDGM-------EVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
V++ S V+ + F M RD + MI G + E + M
Sbjct: 493 GVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRD--HYTCMIDLLGRAGHLKEVEELIENM 550
Query: 110 PLK-DVVSWNLVIGALVNCQRMDLAE 134
P++ D V W ++GA + +D+ E
Sbjct: 551 PMEPDAVLWASLLGACRLHKNIDMGE 576
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 190/637 (29%), Positives = 343/637 (53%), Gaps = 32/637 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ +A +F+ +P+RD +TW MI G ++ A LF M E + L+++
Sbjct: 256 VDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKA 315
Query: 66 DNVQGAKEVFDGMEVR--------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
N A E + R ++ +++S Y G +++AL VF+ + ++VVSW
Sbjct: 316 CNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSW 375
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNGLVREGRIVEARKLFDKMPA 173
+I RM+ A +F +M + ++ ++ R + + R++ D++
Sbjct: 376 TAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIK 435
Query: 174 ----KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
D + +++ Y G + A ++F+++ +++ +W +I V + D A++
Sbjct: 436 AGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVAT 495
Query: 230 FKQM------PETCEKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVGYF 280
F+ + P++ T+ SI++V L K S + + + + N +V F
Sbjct: 496 FQALLKEGIKPDS--STFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMF 553
Query: 281 -EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
G++ SA+ +F M RD+ WN +I G ++ + +F M+ESG PD TFT
Sbjct: 554 VNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFT 613
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
+L C+ L GR++HA + A + V +I+MY +CG+I A L F ++P
Sbjct: 614 GLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKK 673
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
++ SW S+I G A HG ++ALELF +M+ KPD ITFVG LSAC++AGL+ +G ++F
Sbjct: 674 NVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHF 733
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
+ MK+ + ++PR HY C+VDL GR GL+ EA+ +N+++ ++ +WGALLGAC++
Sbjct: 734 ESMKD-FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQ---VKPDSRLWGALLGACQV 789
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
H ++++ E ++ +EL+PN+ GVY+IL+ +Y + G ++ ++ M + GV K+PG S
Sbjct: 790 HLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQS 849
Query: 580 WIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
WI+++ H+F S D +HP+ + L LH E+++
Sbjct: 850 WIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKK 886
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 144/592 (24%), Positives = 276/592 (46%), Gaps = 65/592 (10%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGLMQ 64
A+ +FD+MP +D +WN+++ GY ++ + A L QM + D +T+ ++
Sbjct: 158 AKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACAD 217
Query: 65 SDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+ NV E+F G + D+ ++I+ ++ G +D+AL+VF+ +P +D+++W
Sbjct: 218 AKNVDKGGELFSLILNAGWDT-DLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTS 276
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK----- 174
+I L ++ A + F+ M V + L++ EA + ++ A+
Sbjct: 277 MITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVG 336
Query: 175 ---DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
++ +++ Y G + A ++F + R++ SW +I G R++ A +F
Sbjct: 337 LDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFN 396
Query: 232 QMPETC----EKTWNSIISVLIRNGLVKEA---HSYLEKYPY-SNIASWTNVIVGYFEMG 283
+M E+ T+ SI+ R +K+ H + K Y ++ T ++ Y + G
Sbjct: 397 KMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCG 456
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
+ A VFE ++ ++V WN MI +++ + + F + + G PD++TFTS+L
Sbjct: 457 SLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILN 516
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
+C L+LG+ + + I+ + NA+++M+ CG++ SA+ F+ +P D++S
Sbjct: 517 VCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVS 576
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
WN+II G HG + A + F+ M+ + KPD ITF G+L+AC+ + +GR
Sbjct: 577 WNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRL----- 631
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
LI EA + + G+ T G++ A + +N
Sbjct: 632 ---------------------HALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHN- 669
Query: 524 KVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
L N + + Y GR ++A +F QM++ GVK +
Sbjct: 670 ------------LPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPD 709
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 171/351 (48%), Gaps = 15/351 (4%)
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
D+ WN++I+ Y G A+ +F +M D+D+ SW L+ G V RR + A +QM
Sbjct: 138 DIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMV 197
Query: 235 ETCEKTWN-SIISVLIRNGLVKEAHSYLEKYPYSNIASW-TNVIVG------YFEMGEVG 286
+ K + + +L K E + A W T++ VG + + G V
Sbjct: 198 QDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVD 257
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A+KVF + RD+ W MI GL + ++ F M+E G PD F S+L C+
Sbjct: 258 DALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACN 317
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
L+ G+++HA+ ++ + V A+++MY +CG+++ AL F+ V +++SW +
Sbjct: 318 HPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTA 377
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD-CMKNK 465
+I G A HG E+A F +M + +P+ +TF+ +L ACS + QGR D +K
Sbjct: 378 MIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAG 437
Query: 466 YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
Y R T ++ + + G + +A N+ I + W A++ A
Sbjct: 438 YITDDRVR--TALLSMYAKCGSLMDARNVFERISKQNV----VAWNAMITA 482
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Query: 424 FERMRLTDFKPDDITFVGV----LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
F R + F P + L S++G +G+ N++ + +
Sbjct: 23 FSRQFIVSFSPRLVILEEFDTFRLYTTSFSGSYSKGQ------GNEFVDIKNTQRANAFL 76
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM--ELE 537
+ L + G + EAM +L + + I++ + +LL C H N+ GE + +++
Sbjct: 77 NRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQ 136
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
P + ++ +L MY CG AK+IF +M + V
Sbjct: 137 P-DIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDV 170
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 200/644 (31%), Positives = 331/644 (51%), Gaps = 38/644 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTY 55
++ ++ +A+ +FDKM RD ++W +I GY A+ LF+ M P+RD F
Sbjct: 68 VKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMI 127
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRD-----VVTWNSMISGYVCNGLIDEALRVFHGMP 110
+ + N+ E+ G V+ V +++I Y+ G I++ RVF M
Sbjct: 128 SVALKACALGVNICFG-ELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMM 186
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA--SWTIMV-------NGLVREGRI 161
++VVSW +I LV+ YF EM V S T + + L+ G+
Sbjct: 187 TRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKA 246
Query: 162 VEARKL---FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
+ + + FD+ N + Y G LF+KM D+ SW LI+ V
Sbjct: 247 IHTQTIKQGFDESSF----VINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYV 302
Query: 219 NSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLVK---EAHSYLEKYPYSNIAS 271
+ A+ FK+M ++ + T+ ++IS K + H ++ + N S
Sbjct: 303 QMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALS 362
Query: 272 WTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
N I+ Y + G + SA VF +T +D+ W+ +I + +E + M+ G
Sbjct: 363 VANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREG 422
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
P P+ +SVL++C + L+ G+Q+HA + I + V +A+I+MY++CG++Q A
Sbjct: 423 PKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEAS 482
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F+ + I+DIISW ++I G A HGY+++A+ LFE++ KPD + F+GVL+AC++AG
Sbjct: 483 KIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAG 542
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
+VD G YYF M N Y + P HY C++DLL R G + EA ++ IR+ VW
Sbjct: 543 MVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHI---IRSMPFHTDDVVW 599
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
LL ACR+H ++ G E++++L+PN++G ++ L +Y + GR ++A I MK
Sbjct: 600 STLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSK 659
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
GV KE G SW+ +ND + F++GD +HP+ + +L LL I
Sbjct: 660 GVIKERGWSWVNVNDQLNAFVAGDQAHPQSEHITTVLKLLSANI 703
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 195/470 (41%), Gaps = 72/470 (15%)
Query: 155 LVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLI 214
LV++G++ +AR +FDKM +D +W +IAGY++ A LF M Q +
Sbjct: 67 LVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFM 126
Query: 215 NGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA--HSYLEKYPYSNIASW 272
I A+ + C N L+ VK HS
Sbjct: 127 --------ISVAL-------KACALGVNICFGELLHGFSVKSGLIHSVFVS--------- 162
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+ +I Y ++G++ +VFE M TR+V W +I GL EGL +F +M S
Sbjct: 163 SALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVG 222
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
D+ TF L +D L G+ IH Q IK ++ + V N + TMY +CG +
Sbjct: 223 YDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRL 282
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC------ 446
F + + D++SW ++I G E A+E F+RMR + P+ TF V+S+C
Sbjct: 283 FEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAA 342
Query: 447 -----------------------------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
S GL+ F + K + ++
Sbjct: 343 KWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIIS-----WST 397
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
++ + + G EA + L+ +R +G + + ++L C ++ G+ ++ +
Sbjct: 398 IISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIG 457
Query: 538 PNNSG-VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
++ V+ + MY CG ++A +IF MK N + SW + +G
Sbjct: 458 IDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDI-----ISWTAMING 502
>gi|302820136|ref|XP_002991736.1| hypothetical protein SELMODRAFT_40989 [Selaginella moellendorffii]
gi|300140417|gb|EFJ07140.1| hypothetical protein SELMODRAFT_40989 [Selaginella moellendorffii]
Length = 589
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 300/580 (51%), Gaps = 13/580 (2%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++EA +F MP R+ V+WN M+ + G A ++P+ + +N +I G +
Sbjct: 14 LEEAWKIFHAMPGRNVVSWNTMVSANAQEGDFSRAKIFLARIPQHSLVAWNAMIGGFARE 73
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVC-NGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
AK +FD +VRDVV WN++I G I++ +F +P DV+SWN ++ A
Sbjct: 74 GRFLEAKRLFDAAKVRDVVIWNALIHAKAAVTGGIEDVESLFSRIPCWDVISWNEMLAAY 133
Query: 125 VNCQRMDLAESYF-KEMGARDVASWTIMVNGLVR--EGRIVEARKLFDKMPAKDVQAWNL 181
++ A+++F M RDV SW M R +K F++MP + +WN
Sbjct: 134 TKHGSLNRAKAFFDTRMLQRDVFSWNTMAAAFARMVHQSGAAGKKFFERMPQHNTVSWNS 193
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
+ G +NG A+ LF+ M DRD S Q+ + + A F ++ W
Sbjct: 194 IAQGLSENGLFDDAKSLFESMGDRDSVSMIQMAVTYARNGHPEQAQELFSRISPRTVAVW 253
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N+++ RNG + E + + P N + T +I Y E G + A KVF+ ++
Sbjct: 254 NALLWSYARNGHLSETLATFHRIPMMNRITCTVIIEMYGECGSLIDARKVFDRTPDPNIF 313
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPS--PDNATFTSVLTICSDLPTLDLGRQIHA 359
WN+M+ N E L +MK+SG + PD T+ +L CS+L L GR IHA
Sbjct: 314 SWNIMLAAYAHNGHSNEALVLSQRMKDSGATVVPDRVTYVILLHACSNLGALREGRMIHA 373
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
I V+ A++ MY +CG++ A + F +P D+I WNS+I A +G +
Sbjct: 374 SVIASGMESNVVVATAIVNMYGKCGSMGDAKMVFDKMPAKDVICWNSMISAYALNGLGKS 433
Query: 420 ALELFERMRLT--DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
AL+L+ RMR + KP+ ITFV +LS+CS A + + +YF M + +QP + HY
Sbjct: 434 ALDLYARMRHSCRGLKPNRITFVSLLSSCSAANSLREAVFYFQIMIHDCDIQPGAEHYHF 493
Query: 478 VVDLLGRFGLIDEAMNLLNEIR-ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
++DLLGR G + EA L+N + A G W +LL AC H+ +++G A +RV E+
Sbjct: 494 LIDLLGRSGKVAEAEELINSMPFAPGC----GAWMSLLAACERHSKVELGRRAADRVFEM 549
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
EP N+ YL+L ++Y++ G ++ ++ M++ G+K+EP
Sbjct: 550 EPKNALAYLMLGKIYVAAGMWDELLQLKKLMEDRGLKREP 589
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 207/470 (44%), Gaps = 85/470 (18%)
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDL--AESYFKEMGAR 143
+N +I+ Y GL++EA ++FH MP ++VVSWN ++ A N Q D A+ + +
Sbjct: 1 FNILIASYASAGLLEEAWKIFHAMPGRNVVSWNTMVSA--NAQEGDFSRAKIFLARIPQH 58
Query: 144 DVASWTIMVNGLVREGRIVEARKLFD--------------------------------KM 171
+ +W M+ G REGR +EA++LFD ++
Sbjct: 59 SLVAWNAMIGGFAREGRFLEAKRLFDAAKVRDVVIWNALIHAKAAVTGGIEDVESLFSRI 118
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQ-KMHDRDLTSWKQLINGLVN--SRRIDAAIS 228
P DV +WN M+A Y +G + A+ F +M RD+ SW + + A
Sbjct: 119 PCWDVISWNEMLAAYTKHGSLNRAKAFFDTRMLQRDVFSWNTMAAAFARMVHQSGAAGKK 178
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
+F++MP+ +WNSI L NGL +A S E + S + V Y G A
Sbjct: 179 FFERMPQHNTVSWNSIAQGLSENGLFDDAKSLFESMGDRDSVSMIQMAVTYARNGHPEQA 238
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
++F ++ R V VWN +++ N E L ATF +
Sbjct: 239 QELFSRISPRTVAVWNALLWSYARNGHLSETL---------------ATFHRI------- 276
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
P + N+ T +I MY CG++ A F P +I SWN ++
Sbjct: 277 PMM---------------NRITCT--VIIEMYGECGSLIDARKVFDRTPDPNIFSWNIML 319
Query: 409 CGLAYHGYAEKALELFERMRLTDFK--PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
A++G++ +AL L +RM+ + PD +T+V +L ACS G + +GR +
Sbjct: 320 AAYAHNGHSNEALVLSQRMKDSGATVVPDRVTYVILLHACSNLGALREGRMIHASVIASG 379
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
++ T +V++ G+ G + +A + +++ A + W +++ A
Sbjct: 380 -MESNVVVATAIVNMYGKCGSMGDAKMVFDKMPAKDV----ICWNSMISA 424
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 196/476 (41%), Gaps = 69/476 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFK-NGFLDNAMCLFNQMPERDMFTYNTVIA 60
R R EA+ LFD RD V WN +I G +++ LF+++P D+ ++N ++A
Sbjct: 72 REGRFLEAKRLFDAAKVRDVVIWNALIHAKAAVTGGIEDVESLFSRIPCWDVISWNEMLA 131
Query: 61 GLMQSDNVQGAKEVFDG-MEVRDVVTWNSMISGY--VCNGLIDEALRVFHGMPLKDVVSW 117
+ ++ AK FD M RDV +WN+M + + + + + F MP + VSW
Sbjct: 132 AYTKHGSLNRAKAFFDTRMLQRDVFSWNTMAAAFARMVHQSGAAGKKFFERMPQHNTVSW 191
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
N + L D A+S F+ MG RD S M R G +A++LF ++ + V
Sbjct: 192 NSIAQGLSENGLFDDAKSLFESMGDRDSVSMIQMAVTYARNGHPEQAQELFSRISPRTVA 251
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLI------NGLVNSRRIDAAISYFK 231
WN ++ Y NG + F ++ + + +I L+++R++ F
Sbjct: 252 VWNALLWSYARNGHLSETLATFHRIPMMNRITCTVIIEMYGECGSLIDARKV------FD 305
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEA---------------------------------- 257
+ P+ +WN +++ NG EA
Sbjct: 306 RTPDPNIFSWNIMLAAYAHNGHSNEALVLSQRMKDSGATVVPDRVTYVILLHACSNLGAL 365
Query: 258 -------HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
S + SN+ T ++ Y + G +G A VF+ M +DV WN MI
Sbjct: 366 REGRMIHASVIASGMESNVVVATAIVNMYGKCGSMGDAKMVFDKMPAKDVICWNSMISAY 425
Query: 311 GENDLGEEGLKFFVQMKES--GPSPDNATFTSVLTICSDLPTLD-----LGRQIHAQAIK 363
N LG+ L + +M+ S G P+ TF S+L+ CS +L IH I+
Sbjct: 426 ALNGLGKSALDLYARMRHSCRGLKPNRITFVSLLSSCSAANSLREAVFYFQIMIHDCDIQ 485
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD-IISWNSIICGLAYHGYAE 418
+ + +I + R G + A +S+P +W S++ H E
Sbjct: 486 PGAEHY----HFLIDLLGRSGKVAEAEELINSMPFAPGCGAWMSLLAACERHSKVE 537
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 154/320 (48%), Gaps = 28/320 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
RN ++AQ LF ++ R WN ++ Y +NG L + F+++P + T +I
Sbjct: 231 RNGHPEQAQELFSRISPRTVAVWNALLWSYARNGHLSETLATFHRIPMMNRITCTVIIEM 290
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP------LKDVV 115
+ ++ A++VFD ++ +WN M++ Y NG +EAL + M + D V
Sbjct: 291 YGECGSLIDARKVFDRTPDPNIFSWNIMLAAYAHNGHSNEALVLSQRMKDSGATVVPDRV 350
Query: 116 SWNLVIGALVNC-----QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
++ +++ A N RM A M + V + T +VN + G + +A+ +FDK
Sbjct: 351 TYVILLHACSNLGALREGRMIHASVIASGMESNVVVA-TAIVNMYGKCGSMGDAKMVFDK 409
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR------DLTSWKQLINGLVNSRRID 224
MPAKDV WN MI+ Y NG A DL+ +M + ++ L++ + +
Sbjct: 410 MPAKDVICWNSMISAYALNGLGKSALDLYARMRHSCRGLKPNRITFVSLLSSCSAANSLR 469
Query: 225 AAISYFKQMPETCE-----KTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVG 278
A+ YF+ M C+ + ++ +I +L R+G V EA + P++ +W +++
Sbjct: 470 EAVFYFQIMIHDCDIQPGAEHYHFLIDLLGRSGKVAEAEELINSMPFAPGCGAWMSLLAA 529
Query: 279 YFEMGEVG----SAIKVFEL 294
+V +A +VFE+
Sbjct: 530 CERHSKVELGRRAADRVFEM 549
>gi|357139571|ref|XP_003571354.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 328/627 (52%), Gaps = 56/627 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R +++AQ LFD+MP+RD ++W ++ Y NG +A +F+ MP R+ ++N +++
Sbjct: 54 RRGMLRDAQQLFDRMPRRDVISWTALLTAYADNGDPASARLVFDDMPRRNAASWNALLSL 113
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK--DVVSWNL 119
+++ A +F M R+ V++ +MISG G++ EA VF MP + D V N
Sbjct: 114 YLRAGQPAAAHALFSKMPARNAVSYGAMISGLARAGMLREAEAVFAEMPWRWRDPVGSNA 173
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
+I A V + LA F+ M RDV SWT +V+GL + G ++EARK+F+ MP ++V +W
Sbjct: 174 LIAAYVRAGELSLALRVFEGMAVRDVISWTAVVDGLCKNGSVLEARKVFEAMPERNVVSW 233
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMH-------------------DRDLTSWKQLINGL--- 217
MI GY+ G LFQ M + L I+GL
Sbjct: 234 TSMILGYVKLGRRRDGLLLFQNMRREGVQVNTTTLSVALDACAESSLVREGIQIHGLIIA 293
Query: 218 -----------------------VNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
V++RR+ F M +WNS+I+ +++ +V
Sbjct: 294 MGFEMDVFLGDSLITLYSRFGWMVDARRV------FAYMTWKDVVSWNSLITGYVQHNMV 347
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+EAH + P + SWT+++VG+ G + AI++FE M +D W +I L N
Sbjct: 348 EEAHVLFKLMPEKDAVSWTSMVVGFANRGWITEAIELFEQMPGKDEVAWTAVISSLVTNG 407
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
+++F +M + G P+ F+ +L+ + L L+ G Q HA AI + +++
Sbjct: 408 DYLSAVRWFCRMAQEGCKPNTIAFSCLLSALASLTMLNQGMQAHAYAINMGWIFDSSIHT 467
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
++++MYA+CG + A FSS+ +I+ NS+I H E A +LF +M+ KP
Sbjct: 468 SLVSMYAKCGRLAEAYHVFSSISNPSLIATNSMITAFVQHDLVEDAFKLFTKMQNDGHKP 527
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
+ +TF+G+L+ C+ AGLV QG YF MK+ Y ++P HYTC+VDLLGR GL+ EA+ +
Sbjct: 528 NHVTFLGILTGCARAGLVQQGYNYFGSMKSVYGIEPNPDHYTCMVDLLGRAGLLAEALEM 587
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
+N + + + W ALL A +H+++ +IA ++++E++P ++ Y +L+ M+ S
Sbjct: 588 INSMPQND---NSDAWAALLSASSLHSSLTFAKIAAQKLLEMDPYDATAYTVLSNMFSSA 644
Query: 555 GRREDAKRIFAQMKENGVKKEPGCSWI 581
G + D + + N K PG S I
Sbjct: 645 GMKNDEEMLKVVQLSNMASKSPGYSLI 671
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 194/455 (42%), Gaps = 93/455 (20%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + A +F+ M RD ++W ++ G KNG + A +F MPER++ ++ ++I
Sbjct: 179 VRAGELSLALRVFEGMAVRDVISWTAVVDGLCKNGSVLEARKVFEAMPERNVVSWTSMIL 238
Query: 61 GL---------------MQSDNVQ--------------GAKEVFDGMEVR---------- 81
G M+ + VQ + V +G+++
Sbjct: 239 GYVKLGRRRDGLLLFQNMRREGVQVNTTTLSVALDACAESSLVREGIQIHGLIIAMGFEM 298
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
DV +S+I+ Y G + +A RVF M KDVVSWN +I V ++ A FK M
Sbjct: 299 DVFLGDSLITLYSRFGWMVDARRVFAYMTWKDVVSWNSLITGYVQHNMVEEAHVLFKLMP 358
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+D SWT MV G G I EA +LF++MP KD AW +I+ + NG
Sbjct: 359 EKDAVSWTSMVVGFANRGWITEAIELFEQMPGKDEVAWTAVISSLVTNG----------- 407
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEK---TWNSIISVLIRNGLVKEA 257
D S A+ +F +M E C+ ++ ++S L ++ +
Sbjct: 408 ----DYLS----------------AVRWFCRMAQEGCKPNTIAFSCLLSALASLTMLNQG 447
Query: 258 HSYLEKYPYSNIASW-------TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
++ + Y+ W T+++ Y + G + A VF ++ + N MI
Sbjct: 448 ---MQAHAYAINMGWIFDSSIHTSLVSMYAKCGRLAEAYHVFSSISNPSLIATNSMITAF 504
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD-----LGRQIHAQAIKIA 365
++DL E+ K F +M+ G P++ TF +LT C+ + G I+
Sbjct: 505 VQHDLVEDAFKLFTKMQNDGHKPNHVTFLGILTGCARAGLVQQGYNYFGSMKSVYGIEPN 564
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
+ +T M+ + R G + AL +S+P +D
Sbjct: 565 PDHYT----CMVDLLGRAGLLAEALEMINSMPQND 595
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 133/309 (43%), Gaps = 32/309 (10%)
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
N A ++ Y G + A ++F+ M RDV W ++ +N F M
Sbjct: 41 NNAHLNALLTSYGRRGMLRDAQQLFDRMPRRDVISWTALLTAYADNGDPASARLVFDDM- 99
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI---KIARNQFTTVSNAMITMYARCG 384
P + A++ ++L++ L G+ A A+ ARN + AMI+ AR G
Sbjct: 100 ---PRRNAASWNALLSL-----YLRAGQPAAAHALFSKMPARNAVSY--GAMISGLARAG 149
Query: 385 NIQSALLEFSSVP--IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
++ A F+ +P D + N++I G AL +FE M + D I++ V
Sbjct: 150 MLREAEAVFAEMPWRWRDPVGSNALIAAYVRAGELSLALRVFEGMAVRDV----ISWTAV 205
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
+ G V + R F+ M + + +T ++ + G + + L +R +G
Sbjct: 206 VDGLCKNGSVLEARKVFEAMPERNVVS-----WTSMILGYVKLGRRRDGLLLFQNMRREG 260
Query: 503 IEVSPTVWGALLGACRIHNNIKVG-EIAGERV-MELEPNNSGVYL--ILTEMYLSCGRRE 558
++V+ T L AC + ++ G +I G + M E + V+L L +Y G
Sbjct: 261 VQVNTTTLSVALDACAESSLVREGIQIHGLIIAMGFEMD---VFLGDSLITLYSRFGWMV 317
Query: 559 DAKRIFAQM 567
DA+R+FA M
Sbjct: 318 DARRVFAYM 326
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 193/641 (30%), Positives = 346/641 (53%), Gaps = 29/641 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ + + + +F+ MP+R+ VTW ++ GY ++G L + M LF +M ++ + A
Sbjct: 150 MKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFA 209
Query: 61 GLMQSDNVQGAKEVFDGMEVRDV--------VTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++ QG ++ + + V NS+++ Y GL++EA VF GM +
Sbjct: 210 SVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETR 269
Query: 113 DVVSWNLVIGALV----NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
D+VSWN ++ LV + + + L + +++ ++ ++ AR+L
Sbjct: 270 DMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLH 329
Query: 169 DKMPAKDVQAW-NLMIA---GYLDNGCVGVAEDLFQKMH-DRDLTSWKQLINGLVNSRRI 223
+ + ++ N+M A Y G +G A D+F M +++ SW +ING + + +
Sbjct: 330 SSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDV 389
Query: 224 DAAISYFKQMPETC----EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA-SWTNVIVG 278
A + F +M E + T+++I++ + + L + H+ + K Y + T ++
Sbjct: 390 PLAAALFSRMREDGVAPNDFTYSTILTASVAS-LPPQIHAQVIKTNYECTSIVGTALLAS 448
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y ++ A+ +F+++ +DV W+ M+ + + F++M G P+ T
Sbjct: 449 YSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTI 508
Query: 339 TSVLTICSDLPT--LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
+SV+ C+ PT +DLGRQ HA +IK + VS+A+++MYAR G+I+SA F
Sbjct: 509 SSVIDACAS-PTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQ 567
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
D++SWNS++ G A HGY++KAL++F +M + D +TF+ V+ C++AGLV++G+
Sbjct: 568 TDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQ 627
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
YFD M Y + P HY C+VDL R G +DEAM+L I P VW LLGA
Sbjct: 628 RYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSL---IEGMSFPAGPMVWRTLLGA 684
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
C++H N+++G++A E+++ LEP +S Y++L+ +Y + G+ ++ + M VKKE
Sbjct: 685 CKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEA 744
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
GCSWIQI + H F++ D SHP ++ L + T++++E
Sbjct: 745 GCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQE 785
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 149/316 (47%), Gaps = 33/316 (10%)
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
DV T +V+ ++ +V+ RK+F+ MP ++V W ++ GY+ +G + +LF +M
Sbjct: 138 DVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRM- 196
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV---KEAHSY 260
R W + T+ S++SV+ G+V + H+
Sbjct: 197 -RAEGVWPNSV-------------------------TFASVLSVVASQGMVDLGRRVHAQ 230
Query: 261 LEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
K+ + N ++ Y + G V A VF M TRD+ WN ++ GL N E
Sbjct: 231 SVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEA 290
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
L+ F + S +T+ +V+ +C+++ L L RQ+H+ +K + + V A++
Sbjct: 291 LQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDA 350
Query: 380 YARCGNIQSALLEFSSVP-IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
Y++ G + +AL F + +++SW ++I G +G A LF RMR P+D T
Sbjct: 351 YSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFT 410
Query: 439 FVGVLSACSYAGLVDQ 454
+ +L+A S A L Q
Sbjct: 411 YSTILTA-SVASLPPQ 425
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 138/283 (48%), Gaps = 6/283 (2%)
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
++ T+++ Y + V KVFE M R+V W ++ G ++ + ++ F +M+
Sbjct: 138 DVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMR 197
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
G P++ TF SVL++ + +DLGR++HAQ++K V N+++ MYA+CG ++
Sbjct: 198 AEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVE 257
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
A + F + D++SWN+++ GL +G+ +AL+LF R + T+ V+ C+
Sbjct: 258 EARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCA 317
Query: 448 YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
+ R + + F T ++D + G + A+++ + VS
Sbjct: 318 NIKQLGLARQLHSSVLKRGF-HSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVS- 375
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYLILT 548
W A++ C + ++ + R+ E + PN+ ILT
Sbjct: 376 --WTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILT 416
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT-VSNAMITMYARCGNIQSALLEFSS 395
VL +C +P LG+Q+H I+ ++ V +++ MY + ++ F +
Sbjct: 105 ALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEA 164
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+P ++++W S++ G G +ELF RMR P+ +TF VLS + G+VD G
Sbjct: 165 MPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLG 224
Query: 456 R------YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
R F C + ++++ + GL++EA
Sbjct: 225 RRVHAQSVKFGCCSTVFVCNS-------LMNMYAKCGLVEEA 259
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 196/619 (31%), Positives = 327/619 (52%), Gaps = 54/619 (8%)
Query: 21 TVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
T N ++ Y +G L +A +F+ MP R++ T N++++ L ++ V+ + +F +
Sbjct: 46 TYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQ 105
Query: 81 RDVVTWNSMISGYVCNG------------LIDEA-LR----VFHGMPLKDVVSWNLVIGA 123
RD V++N++++G+ G L DEA +R G+ + + +G
Sbjct: 106 RDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGR 165
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
V+CQ + L + G + +V+ + G I +AR++FD+M K+V N MI
Sbjct: 166 QVHCQILRLGFGAYAFTG-------SPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMI 218
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EK 239
G L V A LF+ + +RD +W ++ GL + A+ F++M +
Sbjct: 219 TGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQY 278
Query: 240 TWNSIISVL-----IRNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEMGEVGSA 288
T+ SI++ + G K+ H+Y+ + Y + NV VG Y + V A
Sbjct: 279 TFGSILTACGALAALEEG--KQIHAYITRTCYED-----NVFVGSALVDMYSKCRSVRLA 331
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
VF M +++ W MI G G+N GEE ++ F +M+ G PD+ T SV++ C++L
Sbjct: 332 EAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANL 391
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
+L+ G Q H A+ + TVSNA++T+Y +CG+I+ A F + HD +SW +++
Sbjct: 392 ASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 451
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
G A G A++ ++LFE+M KPD +TF+GVLSACS +GLVD+GR YF M+ + +
Sbjct: 452 MGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDI 511
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV--WGALLGACRIHNNIKVG 526
P HYTC++DL R G + +A + + + P W LL ACR+ ++++G
Sbjct: 512 VPLDDHYTCMIDLYSRSGWLKQAEEFIKQ-----MPRCPDAFGWATLLSACRLRGDMEIG 566
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
+ A E +++L+P N Y++L M+ S G D ++ M++ VKKEPGCSWI+ +
Sbjct: 567 KWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNK 626
Query: 587 GHVFLSGDSSHPKFHRLRY 605
H+F + D SHP F R Y
Sbjct: 627 VHIFSADDQSHP-FSRTIY 644
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 179/424 (42%), Gaps = 66/424 (15%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I +A+ +FD+M ++ V N MI G + + A LF + ERD T+ T++ GL Q+
Sbjct: 196 IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQN 255
Query: 66 DNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
A +VF M D T+ S+++ ++E ++ H + N+ +
Sbjct: 256 GLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQI-HAYITRTCYEDNVFV 314
Query: 122 G-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
G ALV+ C+ + LAE+ F+ M +++ SWT M+ G + G EA ++F +M +
Sbjct: 315 GSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGI 374
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
+ + + G + + C +A + + L++GL R +S
Sbjct: 375 KPDDFTL-GSVISSCANLAS-----LEEGAQFHCLALVSGL----RPYVTVS-------- 416
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
N+++++ + G +++AH ++ + + SWT +++GY + G+ I +FE M
Sbjct: 417 -----NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKML 471
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
++ G PD TF VL+ CS +D GR
Sbjct: 472 SK-------------------------------GVKPDGVTFIGVLSACSRSGLVDKGRS 500
Query: 357 -IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP-IHDIISWNSIICGLAYH 414
H+ MI +Y+R G ++ A +P D W +++
Sbjct: 501 YFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLR 560
Query: 415 GYAE 418
G E
Sbjct: 561 GDME 564
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 140/321 (43%), Gaps = 56/321 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+R + EA+ LF+ + +RD++TW M+ G +NG A+ +F +M D +T+
Sbjct: 222 LRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFG 281
Query: 57 TV------IAGLMQSDNVQG-----------------------------AKEVFDGMEVR 81
++ +A L + + A+ VF M +
Sbjct: 282 SILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWK 341
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV----NCQRMDLAESYF 137
++++W +MI GY NG +EA+RVF M + + +G+++ N ++ +
Sbjct: 342 NIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFH 401
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ + + N LV + G I +A +LFD+M D +W ++ GY G
Sbjct: 402 CLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAK 461
Query: 194 VAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPE-----TCEKTWNSI 244
DLF+KM + D ++ +++ S +D SYF M + + + +
Sbjct: 462 ETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCM 521
Query: 245 ISVLIRNGLVKEAHSYLEKYP 265
I + R+G +K+A ++++ P
Sbjct: 522 IDLYSRSGWLKQAEEFIKQMP 542
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 202/632 (31%), Positives = 331/632 (52%), Gaps = 46/632 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R+ A+ L + + N +I Y K LD+A LF++MP+R+ FT+N++I+
Sbjct: 32 RGTRLVHARILMTQFSM-EIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISV 90
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV----SW 117
L +S + A +F M D +WNSM+SG+ + +E+L F M +D + S+
Sbjct: 91 LTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSF 150
Query: 118 NLVIGALVNCQRMDLAESYF----KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
+ A +++ K + DV + +++ + G + A ++F M
Sbjct: 151 GSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIE 210
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
+++ WN +I Y NG A ++F +M D L + + +V++ A+ Q+
Sbjct: 211 RNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQI 270
Query: 234 PETCEKT---------WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE 284
KT N+++ + + V EA ++ N+ S T+++ GY
Sbjct: 271 HARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAAS 330
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
V +A +F MT R+V WN +I G +N EE L+ F +K P + TF ++L
Sbjct: 331 VKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLK- 389
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
SD+ V N++I MY +CG+I+ F + D +SW
Sbjct: 390 -SDI----------------------FVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSW 426
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
N+II G A +GY +AL++F +M + KPD +T +GVL ACS+AGLV++GR+YF M+
Sbjct: 427 NAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSME- 485
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
++ L P HYTC+VDLLGR G ++EA NL I A + VWG+LL AC++H NI+
Sbjct: 486 EHGLIPLKDHYTCMVDLLGRAGCLNEAKNL---IEAMPVNPDAVVWGSLLAACKVHGNIE 542
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIN 584
+G+ A E+++E++P NSG Y++L+ MY GR D R+ M++ GV K+PGCSWI++
Sbjct: 543 MGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVE 602
Query: 585 DGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
HVFL D SHP ++ +L +L +++R
Sbjct: 603 SRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKR 634
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 114/306 (37%), Gaps = 63/306 (20%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC--------- 383
P+++ F +L C + R +HA+ + + + N +I +Y +C
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 384 ----------------------GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
G + A F S+P D SWNS++ G A H E++L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 422 ELFERMRLTDFKPDDITFVGVLSACS----------YAGLVDQGRYYFD----------- 460
E F +M DF ++ +F LSAC+ LV + RY D
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192
Query: 461 -------CMKNKY--FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
C + + ++ + ++ + G EA+ + + G+E
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLA 252
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQMKE 569
+++ AC +K G RV++ + L L +MY C + +A+R+F +M
Sbjct: 253 SVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI 312
Query: 570 NGVKKE 575
V E
Sbjct: 313 RNVVSE 318
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 15/182 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYN 56
M+ I++ +F+KM +RD V+WN +I GY +NG+ A+ +F +M + D T
Sbjct: 403 MKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMI 462
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVT----WNSMISGYVCNGLIDEALRVFHGMPLK 112
V+ + V+ + F ME ++ + M+ G ++EA + MP+
Sbjct: 463 GVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVN 522
Query: 113 -DVVSWNLVIGALV---NCQRMDLAESYFKEMGARDVASWTIMVN---GLVREGRIVEAR 165
D V W ++ A N + A E+ + + ++ N L R G +V R
Sbjct: 523 PDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVR 582
Query: 166 KL 167
KL
Sbjct: 583 KL 584
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 201/682 (29%), Positives = 347/682 (50%), Gaps = 79/682 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRG------------------------------- 30
+ + +A+ LFD+MP+RD +WN ++
Sbjct: 99 KQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFD 158
Query: 31 --------------YFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFD 76
+ + G++D A LF+Q+ +F N+++AG + + A E F+
Sbjct: 159 FWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFE 218
Query: 77 GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMDLAES 135
M RDVV+WN MI+ +G + EAL + M K V + +L C R+ +
Sbjct: 219 DMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARL-FSLG 277
Query: 136 YFKEMGARDVASW--------TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
+ K++ A+ + S + ++ + G EA+++F+ + ++ +W ++I G L
Sbjct: 278 WGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSL 337
Query: 188 DNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW-- 241
C + +LF +M D + LI+G N R+D + +Q+ C K+
Sbjct: 338 QYECFSKSVELFNQMRAELMAIDQFALATLISGCFN--RMDLCLG--RQLHSLCLKSGHN 393
Query: 242 ------NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
NS+IS+ + G ++ A +I SWT++I Y ++G + A + F+ M
Sbjct: 394 RAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGM 453
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLG 354
TR+ WN M+ ++ E+GLK + M + +PD T+ ++ C+D+ LG
Sbjct: 454 ATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLG 513
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
QI +K +V+NA ITMY++CG I A F + D++SWN++I G + H
Sbjct: 514 DQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQH 573
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
G ++A + F+ M KPD I++V VLS CS++GLV +G+ YFD M + + P H
Sbjct: 574 GMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEH 633
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGER 532
++C+VDLLGR G + EA +L+ D + + PT VWGALL AC+IH N ++ E+A +
Sbjct: 634 FSCMVDLLGRAGHLTEAKDLI-----DKMPMKPTAEVWGALLSACKIHGNDELAELAAKH 688
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLS 592
V EL+ +SG Y++L ++Y G+ +D+ ++ M++ G+KK PG SW+++ + HVF +
Sbjct: 689 VFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKA 748
Query: 593 GDSSHPKFHRLRYLLNLLHTEI 614
D SHP+ +R ++ L +I
Sbjct: 749 DDVSHPQVIAIRNKMDELMEKI 770
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 145/303 (47%), Gaps = 15/303 (4%)
Query: 159 GRIVEARKLFDK-MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL 217
G + +AR+L + +V N+M+ GY G + AE+LF +M RD+ SW L++
Sbjct: 69 GALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDT 128
Query: 218 ---VNSRRIDAAISYFKQMPETCEKTW-----------NSIISVLIRNGLVKEAHSYLEK 263
S A+ + P+ W +++ + +R G V A +
Sbjct: 129 SRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQ 188
Query: 264 YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
I +++ GY ++ + AI+ FE M RDV WN+MI L ++ E L
Sbjct: 189 IERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLV 248
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
V+M G D+ T+TS LT C+ L +L G+Q+HA+ I+ V++A+I +YA+C
Sbjct: 249 VEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKC 308
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G+ + A F+S+ + +SW +I G + K++ELF +MR D ++
Sbjct: 309 GSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLI 368
Query: 444 SAC 446
S C
Sbjct: 369 SGC 371
>gi|115474659|ref|NP_001060926.1| Os08g0131000 [Oryza sativa Japonica Group]
gi|42408463|dbj|BAD09644.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50725835|dbj|BAD33365.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113622895|dbj|BAF22840.1| Os08g0131000 [Oryza sativa Japonica Group]
gi|215704880|dbj|BAG94908.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712334|dbj|BAG94461.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 674
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/626 (29%), Positives = 321/626 (51%), Gaps = 55/626 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R+++AQ LFD+MP RD ++W ++ Y G L +A +F+ MP R+ ++N +++
Sbjct: 50 RRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAPSWNALLSV 109
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL--KDVVSWNL 119
+++ + A +F M ++ V++ ++ISG ++ EA V+ MP +D V N
Sbjct: 110 YLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELVYEEMPWQWRDPVGSNA 169
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++ + + +A F+ M RDV SW+ MV+GL + G + EAR++FD MP ++V +W
Sbjct: 170 LMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSW 229
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA-------------- 225
MI GY+ G LF M + +N S +DA
Sbjct: 230 TSMIRGYVKRGMCRDGLLLFLNMRREGVQ-----VNTTTLSVALDACAAASLAREGIQIH 284
Query: 226 ------------------------------AISYFKQMPETCEKTWNSIISVLIRNGLVK 255
A F M + +WNS+I+ +++ +V+
Sbjct: 285 NLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVE 344
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
EAH + + SWT+++VG+ G + ++++FE M +D W +I N
Sbjct: 345 EAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITNGD 404
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
+++F +M + G P+ F+ +L+ + L L+ GRQ HA +I + + V +
Sbjct: 405 YLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVHTS 464
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
+++MYA+CG + A FSS+ +I+ NS+I HG+ E AL+LF +M+ +KP+
Sbjct: 465 LVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPN 524
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
+TF+G+L+ C+ AG V QG YF+ M+ Y ++P HYTC+VDLLGR GL+ EA+ ++
Sbjct: 525 HVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMI 584
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
N + + W ALL A +H+N+ +IA ++++E +P ++ Y +L+ M+ S G
Sbjct: 585 NSMPQND---HSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVLSRMFSSAG 641
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWI 581
ED + + N K PG S I
Sbjct: 642 -MEDEEMLKVVQLSNLASKRPGYSLI 666
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 222/510 (43%), Gaps = 95/510 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + A +F+ M RD ++W+ M+ G K+G + A +F+ MPER++ ++ ++I
Sbjct: 175 LRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIR 234
Query: 61 GL---------------MQSDNVQ--------------GAKEVFDGMEVR---------- 81
G M+ + VQ A +G+++
Sbjct: 235 GYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFEL 294
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
D+ +S+I Y G + +A R F M KD+VSWN +I V ++ A FK M
Sbjct: 295 DIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMH 354
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+D SWT MV G G + E+ +LF++MP KD AW +I+ ++ NG
Sbjct: 355 QKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITNG----------- 403
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEK---TWNSIISVLIRNGLV--- 254
D S A+ +F +M E C+ ++ ++S L ++
Sbjct: 404 ----DYLS----------------AVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQG 443
Query: 255 KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
++AH+Y + + A T+++ Y + G + A VF ++ + N MI ++
Sbjct: 444 RQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQH 503
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG-------RQIHAQAIKIAR 366
E+ LK F +M+ +G P++ TF +LT C+ + G R ++ ++
Sbjct: 504 GFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVY--GVEPNP 561
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII-SWNSIICGLAYHGYAEKALELFE 425
+T M+ + R G + AL +S+P +D +W +++ + H + A
Sbjct: 562 EHYTC----MVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLH--SNLAFAKIA 615
Query: 426 RMRLTDFKPDDITFVGVLSAC-SYAGLVDQ 454
+L + P D T VLS S AG+ D+
Sbjct: 616 AQKLLEKDPYDATAYTVLSRMFSSAGMEDE 645
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 134/347 (38%), Gaps = 42/347 (12%)
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE-NDLGEEGLKFFVQMKESGPSP 333
++ Y G + A +F+ M +RDV W ++ + DL L F + + PS
Sbjct: 44 LLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAPSW 103
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLE 392
NA + L L ++ A+ VS A+I+ A+ + A L
Sbjct: 104 -NALLSVYLRAARPRAAHALFYKMPAK---------NAVSYGAIISGLAKAEMLHEAELV 153
Query: 393 FSSVPIH--DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
+ +P D + N+++ G G AL +FE M + D I++ ++ G
Sbjct: 154 YEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDV----ISWSAMVDGLCKHG 209
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
V + R FD M + + +T ++ + G+ + + L +R +G++V+ T
Sbjct: 210 SVSEARRVFDAMPERNVVS-----WTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTL 264
Query: 511 GALLGACR----IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
L AC I++ + EL+ +I MY G DAKR F
Sbjct: 265 SVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIII---MYSRFGWMVDAKRAFDC 321
Query: 567 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
M++ + SW + ++G H L L+H +
Sbjct: 322 MQQKDI-----VSW-------NSLITGYVQHDMVEEAHVLFKLMHQK 356
>gi|325260820|gb|ADZ04639.1| hypothetical protein [Oryza glaberrima]
Length = 674
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/626 (29%), Positives = 321/626 (51%), Gaps = 55/626 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R+++AQ LFD+MP RD ++W ++ Y G L +A +F+ MP R+ ++N +++
Sbjct: 50 RRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAPSWNALLSV 109
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL--KDVVSWNL 119
+++ + A +F M ++ V++ ++ISG ++ EA V+ MP +D V N
Sbjct: 110 YLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELVYEEMPWQWRDPVGSNA 169
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++ + + +A F+ M RDV SW+ MV+GL + G + EAR++FD MP ++V +W
Sbjct: 170 LMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSW 229
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA-------------- 225
MI GY+ G LF M + +N S +DA
Sbjct: 230 TSMIRGYVKRGMCRDGLLLFLNMRREGVQ-----VNTTTLSVALDACAVASLAREGIQIH 284
Query: 226 ------------------------------AISYFKQMPETCEKTWNSIISVLIRNGLVK 255
A F M + +WNS+I+ +++ +V+
Sbjct: 285 NLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVE 344
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
EAH + + SWT+++VG+ G + ++++FE M +D W +I N
Sbjct: 345 EAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITNGD 404
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
+++F +M + G P+ F+ +L+ + L L+ GRQ HA +I + + V +
Sbjct: 405 YLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVHTS 464
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
+++MYA+CG + A FSS+ +I+ NS+I HG+ E AL+LF +M+ +KP+
Sbjct: 465 LVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPN 524
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
+TF+G+L+ C+ AG V QG YF+ M+ Y ++P HYTC+VDLLGR GL+ EA+ ++
Sbjct: 525 HVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMI 584
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
N + + W ALL A +H+N+ +IA ++++E +P ++ Y +L+ M+ S G
Sbjct: 585 NSMPQND---HSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVLSRMFSSAG 641
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWI 581
ED + + N K PG S I
Sbjct: 642 -MEDEEMLKVVQLSNLASKRPGYSLI 666
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 222/510 (43%), Gaps = 95/510 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + A +F+ M RD ++W+ M+ G K+G + A +F+ MPER++ ++ ++I
Sbjct: 175 LRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIR 234
Query: 61 GL---------------MQSDNVQ--------------GAKEVFDGMEVR---------- 81
G M+ + VQ A +G+++
Sbjct: 235 GYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAVASLAREGIQIHNLIISMGFEL 294
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
D+ +S+I Y G + +A R F M KD+VSWN +I V ++ A FK M
Sbjct: 295 DIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMH 354
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+D SWT MV G G + E+ +LF++MP KD AW +I+ ++ NG
Sbjct: 355 QKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITNG----------- 403
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEK---TWNSIISVLIRNGLV--- 254
D S A+ +F +M E C+ ++ ++S L ++
Sbjct: 404 ----DYLS----------------AVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQG 443
Query: 255 KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
++AH+Y + + A T+++ Y + G + A VF ++ + N MI ++
Sbjct: 444 RQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQH 503
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG-------RQIHAQAIKIAR 366
E+ LK F +M+ +G P++ TF +LT C+ + G R ++ ++
Sbjct: 504 GFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVY--GVEPNP 561
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII-SWNSIICGLAYHGYAEKALELFE 425
+T M+ + R G + AL +S+P +D +W +++ + H + A
Sbjct: 562 EHYT----CMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLH--SNLAFAKIA 615
Query: 426 RMRLTDFKPDDITFVGVLSAC-SYAGLVDQ 454
+L + P D T VLS S AG+ D+
Sbjct: 616 AQKLLEKDPYDATAYTVLSRMFSSAGMEDE 645
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 135/347 (38%), Gaps = 42/347 (12%)
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE-NDLGEEGLKFFVQMKESGPSP 333
++ Y G + A +F+ M +RDV W ++ + DL L F + + PS
Sbjct: 44 LLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAPSW 103
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLE 392
NA + L L ++ A+ VS A+I+ A+ + A L
Sbjct: 104 -NALLSVYLRAARPRAAHALFYKMPAK---------NAVSYGAIISGLAKAEMLHEAELV 153
Query: 393 FSSVPIH--DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
+ +P D + N+++ G G AL +FE M + D I++ ++ G
Sbjct: 154 YEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDV----ISWSAMVDGLCKHG 209
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
V + R FD M + + +T ++ + G+ + + L +R +G++V+ T
Sbjct: 210 SVSEARRVFDAMPERNVVS-----WTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTL 264
Query: 511 GALLGACRI----HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
L AC + I++ + EL+ +I MY G DAKR F
Sbjct: 265 SVALDACAVASLAREGIQIHNLIISMGFELDIFLGDSIII---MYSRFGWMVDAKRAFDC 321
Query: 567 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
M++ + SW + ++G H L L+H +
Sbjct: 322 MQQKDI-----VSW-------NSLITGYVQHDMVEEAHVLFKLMHQK 356
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/635 (31%), Positives = 326/635 (51%), Gaps = 29/635 (4%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
+ EA+ LFDK + V+WNVMI GY G A LF M E D FT+ ++++
Sbjct: 95 VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSA 154
Query: 62 LMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ +EV + + N++IS Y G + +A RVF M +D VSW
Sbjct: 155 CSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 214
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDV-ASWTIMVNGL--------VREGRIVEARKLF 168
+ GA + + M V S +N L + +G+ + A ++
Sbjct: 215 TTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHA-QIV 273
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+ DV+ + Y+ G V A ++F+ + +RD+ +W +I GLV+S +++ A
Sbjct: 274 ESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHG 333
Query: 229 YFKQMPETC----EKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YF 280
F +M + C T+ +I+S R G + KE H+ K + + N ++ Y
Sbjct: 334 MFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYS 393
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G + A +VF+ M RDV W ++ G + E F +M + G + T+
Sbjct: 394 KAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMC 453
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
VL CS+ L G++IHA+ +K V+NA+++MY +CG+++ A+ + D
Sbjct: 454 VLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRD 513
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+++WN++I GLA +G +AL+ FE M+ + +P+ TFV V+SAC LV++GR F
Sbjct: 514 VVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFA 573
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
M+ Y + P HY C+VD+L R G + EA +++ + + S +WGALL ACR H
Sbjct: 574 SMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTM---PFKPSAAMWGALLAACRAH 630
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
N+++GE A E+ ++LEP N+G Y+ L+ +Y + G D ++ MKE GVKKEPG SW
Sbjct: 631 GNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSW 690
Query: 581 IQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
I++ H F++GD SHP+ + L L +I+
Sbjct: 691 IEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIK 725
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 193/454 (42%), Gaps = 66/454 (14%)
Query: 156 VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
V G + EAR+LFDK K V +WN+MI+GY G A +LF M L K
Sbjct: 90 VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149
Query: 216 GLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNV 275
++++ AA++ W +E H + + +N A+ N
Sbjct: 150 SILSACSSPAALN------------WG------------REVHVRVMEAGLANNATVGNA 185
Query: 276 IVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ Y + G V A +VF+ M +RD W + E+ +E LK + M + G P
Sbjct: 186 LISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPS 245
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
T+ +VL+ C L L+ G+QIHAQ ++ + VS A+ MY +CG ++ A F
Sbjct: 246 RITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFE 305
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC-------- 446
+P D+I+WN++I GL G E+A +F RM PD +T++ +LSAC
Sbjct: 306 CLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLAC 365
Query: 447 ---------------------------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
S AG + R FD M + + +T +V
Sbjct: 366 GKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVS-----WTALV 420
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEP 538
G + E+ + ++ G+E + + +L AC +K G EI E V
Sbjct: 421 GGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIF 480
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ V L MY CG EDA R+ M V
Sbjct: 481 ADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDV 514
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 162/369 (43%), Gaps = 47/369 (12%)
Query: 255 KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
K+ H ++ ++ N+ ++ Y G V A ++F+ + + V WNVMI G
Sbjct: 64 KQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHR 123
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
LG+E F M++ G PD TF S+L+ CS L+ GR++H + ++ TV
Sbjct: 124 GLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVG 183
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
NA+I+MYA+CG+++ A F ++ D +SW ++ A GYA+++L+ + M +
Sbjct: 184 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVR 243
Query: 434 PDDITFVGVLSACSY-----------------------------------AGLVDQGRYY 458
P IT++ VLSAC G V R
Sbjct: 244 PSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREV 303
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F+C+ N+ + + ++ L G ++EA + + + + + + A+L AC
Sbjct: 304 FECLPNRDVIA-----WNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACA 358
Query: 519 IHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
+ G EI V + ++ L MY G +DA+++F +M + V
Sbjct: 359 RPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDV----- 413
Query: 578 CSWIQINDG 586
SW + G
Sbjct: 414 VSWTALVGG 422
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 130/316 (41%), Gaps = 50/316 (15%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
+ + G D+ + +L C L +G+Q+H ++ + N ++ +Y CG+
Sbjct: 35 LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+ A F ++SWN +I G A+ G ++A LF M+ +PD TFV +LSA
Sbjct: 95 VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSA 154
Query: 446 CS---------------------------------YA--GLVDQGRYYFDCMKNKYFLQP 470
CS YA G V R FD M ++
Sbjct: 155 CSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR----- 209
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
+T + G E++ + + +G+ S + +L AC ++ G+
Sbjct: 210 DEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIH 269
Query: 531 ERVMELEPNNS-GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
+++E E ++ V LT+MY+ CG +DA+ +F + V +W + G +
Sbjct: 270 AQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDV-----IAWNTMIGG--L 322
Query: 590 FLSG--DSSHPKFHRL 603
SG + +H FHR+
Sbjct: 323 VDSGQLEEAHGMFHRM 338
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 196/645 (30%), Positives = 338/645 (52%), Gaps = 37/645 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
+R + A+ +F MP RDTVT+N +I G+ + G ++A+ +F +M D T +
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248
Query: 57 TVIAGLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
+++A ++Q ++ F D + S++ YV G ++ AL +F+
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308
Query: 113 DVVSWNLVIGALVNCQRMDLAESY--FKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+VV WNL++ A Q DLA+S+ F +M A + ++R L ++
Sbjct: 309 NVVLWNLMLVAF--GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ 366
Query: 171 MPA--------KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ + D+ ++I Y G + A + + + ++D+ SW +I G V
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC 426
Query: 223 IDAAISYFKQMPETCEKTWNSIISVL-----------IRNGLVKEAHSYLEKYPYSNIAS 271
A++ FK+M + C W I + +R GL A Y+ Y +++
Sbjct: 427 CKDALAAFKEM-QKC-GIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYS-GDVSI 483
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
W ++ Y G + A FE M +D N ++ G ++ L EE LK F++M +SG
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGV 543
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
+ TF S L+ ++L + G+QIHA+ IK + T V NA+I++Y +CG+ + A +
Sbjct: 544 KHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKM 603
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
EFS + + +SWN+II + HG +AL+LF++M+ KP+D+TF+GVL+ACS+ GL
Sbjct: 604 EFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGL 663
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
V++G YF M ++Y ++PR HY CV+D+ GR G +D A + E+ I VW
Sbjct: 664 VEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEM---PIAADAMVWR 720
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
LL AC++H NI+VGE A + ++ELEP++S Y++L+ Y + + ++ M++ G
Sbjct: 721 TLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRG 780
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
V+KEPG SWI++ + H F GD HP ++ L +++ + +
Sbjct: 781 VRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAK 825
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 142/561 (25%), Positives = 237/561 (42%), Gaps = 78/561 (13%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
AK V G+ +V N +I Y NGL+ A RVF + +D VSW ++
Sbjct: 66 AKAVTRGLGKYRIVG-NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLG 124
Query: 131 DLAESYFKEMGARDVASWTIMVNG---------LVREGRIVEARKLFDKMPAKDVQAWNL 181
+ A +++M V +++ L +GR++ A+ + ++ N
Sbjct: 125 EEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQG-YKHGFCSEIFVGNA 183
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PE 235
+I YL G +AE +F M RD ++ LI+G + A+ F++M P+
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 236 TCEKTWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKV 291
T +S+++ G +++ HSYL K S+ ++ Y + G+V +A+ +
Sbjct: 244 CV--TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 292 FELMTTRDVTVWNVMIFGLGE-NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
F +V +WN+M+ G+ NDL + + F QM+ +G P+ T+ +L C+
Sbjct: 302 FNSSDRTNVVLWNLMLVAFGQINDLAKS-FELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
+DLG QIH+ ++K VS +I MY++ G ++ A + D++SW S+I G
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-----RYYFDCMKNK 465
H + AL F+ M+ PD+I +S C+ + QG R Y
Sbjct: 421 YVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGD 480
Query: 466 YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR-ADGIEVSPTVWG------------- 511
+ + +V+L R G I EA + E+ DGI + V G
Sbjct: 481 VSI------WNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKV 534
Query: 512 -----------------ALLGACRIHNNIKVGEIAGERVM------ELEPNNSGVYLILT 548
+ L A IK G+ RV+ E E N+ L
Sbjct: 535 FMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA-----LI 589
Query: 549 EMYLSCGRREDAKRIFAQMKE 569
+Y CG EDAK F++M E
Sbjct: 590 SLYGKCGSFEDAKMEFSEMSE 610
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 101/249 (40%), Gaps = 49/249 (19%)
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+IHA+A+ ++ V N +I +Y++ G + A F + D +SW +++ G A +G
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR------------------- 456
E+AL L+ +M P VLS+C+ A L QGR
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 457 ----YYFDC----MKNKYFLQ-PR--SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
Y C + + F P + + ++ + G + A+ + E++ G+
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 506 SPTVWGALLGAC----------RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
+LL AC ++H+ + I+ + +ME L ++Y+ CG
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS---------LLDLYVKCG 293
Query: 556 RREDAKRIF 564
E A IF
Sbjct: 294 DVETALVIF 302
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 210/658 (31%), Positives = 334/658 (50%), Gaps = 79/658 (12%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIA 60
+++ A +F+ + +R+ V WN MIRGY NG M LF M D FT+ ++++
Sbjct: 377 KMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436
Query: 61 GLMQSDNVQGAKE----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
S +++ + + +++ N+++ Y G +++A ++F M +D VS
Sbjct: 437 TCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVS 496
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGA---------------------------------- 142
WN +IG V + A F M +
Sbjct: 497 WNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSV 556
Query: 143 -----RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
R + + + +++ + G I +ARK+F MP V + N +IAGY N + A
Sbjct: 557 KCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNN-LEEAVV 615
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
LFQ+M L G VN I F + E C K + + +
Sbjct: 616 LFQEM----------LTKG-VNPSEIT-----FATIVEACHKPESLTLGT--------QF 651
Query: 258 HSYLEKYPYSNIASWTNV-IVG-YFEMGEVGSAIKVF-ELMTTRDVTVWNVMIFGLGEND 314
H + K+ +S+ + + ++G Y + A +F EL + + + +W M+ G +N
Sbjct: 652 HGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
EE LKF+ +M+ G PD ATF +VL +CS L +L GR IH+ +A + SN
Sbjct: 712 FYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN 771
Query: 375 AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
+I MYA+CG+++S+ F + +++SWNS+I G A +GYAE AL++F+ MR +
Sbjct: 772 TLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIM 831
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
PD+ITF+GVL+ACS+AG V GR F+ M +Y ++ R H C+VDLLGR+G + EA +
Sbjct: 832 PDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADD 891
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
I A ++ +W +LLGACRIH + GEIA ER++ELEP NS Y++L+ +Y S
Sbjct: 892 F---IEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNIYAS 948
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLH 611
GR E+A + M++ GVKK PG SWI + H+F +GD SH ++ L L+
Sbjct: 949 QGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGDQSHSDIGKIEMFLEDLY 1006
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 149/609 (24%), Positives = 275/609 (45%), Gaps = 71/609 (11%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNG----FLDNAMCLFNQMPERDMFTYNTVI 59
A++ A+ F+ + ++D WN M+ Y G L + + LF + + FT++ V+
Sbjct: 109 AQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVL 167
Query: 60 AGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
+ + NV+ +++ G+E R+ +++ Y + +A RVF G+ +
Sbjct: 168 STSARETNVEFGRQIHCSMIKMGLE-RNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNT 226
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKLFDK 170
V W + V + A F+ M G R D ++ ++N + G++ +AR LF +
Sbjct: 227 VCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGE 286
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
MP+ DV AWN+MI+G+ GC VA + F M + S + + ++++ I A +
Sbjct: 287 MPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDL- 345
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
GLV A + ++ SNI ++++ Y + ++ +A K
Sbjct: 346 ---------------------GLVVHAEA-IKLGLASNIYVGSSLVSMYSKCEKMEAAAK 383
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
VFE + R+ +WN MI G N + ++ F+ MK SG + D+ TFTS+L+ C+
Sbjct: 384 VFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHD 443
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
L++G Q H+ IK + V NA++ MYA+CG ++ A F + D +SWN+II G
Sbjct: 444 LEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGG 503
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
+A +LF RM D L AC+ + QG+ C+ K L
Sbjct: 504 YVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGK-QVHCLSVKCGLDR 562
Query: 471 RSAHYTCVVDLLGRFGLI------------------------------DEAMNLLNEIRA 500
+ ++D+ + G+I +EA+ L E+
Sbjct: 563 VLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLT 622
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRRE 558
G+ S + ++ AC ++ +G ++++ ++ G YL L +Y++ R
Sbjct: 623 KGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMA 682
Query: 559 DAKRIFAQM 567
+A +F+++
Sbjct: 683 EACALFSEL 691
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 140/619 (22%), Positives = 262/619 (42%), Gaps = 129/619 (20%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNV--------MIRGYFKNGFLDNAMCLFNQMPERDM 52
+ ++ +++ +FD+MP R + + +I G G L NA+ D+
Sbjct: 53 LEQCKLFKSRKVFDEMPHRLALALRIGKAVHSKSLILGIDSEGRLGNAIV--------DL 104
Query: 53 FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
+ + V A++ F+ +E +DV WNSM+S Y G + LR F
Sbjct: 105 YA---------KCAQVSYAEKQFNSLE-KDVTAWNSMLSMYSSIGQPGKVLRSF------ 148
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
S F+ + + +++I+++ RE + R++ M
Sbjct: 149 ---------------------VSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMI 187
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
++ ++ C G D++ K DR L +++ +G+V+
Sbjct: 188 KMGLER---------NSYCGGALVDMYAKC-DR-LGDAQRVFDGIVD------------- 223
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKY----PYSNIASWTNVIVGYFEMGEVGSA 288
P T W + S ++ GL +EA E+ + ++ VI Y +G++ A
Sbjct: 224 -PNTV--CWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDA 280
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+F M + DV WNVMI G G+ +++F+ M++S +T SVL+ +
Sbjct: 281 RLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
LDLG +HA+AIK+ V +++++MY++C +++A F ++ + + WN++I
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMI 400
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
G A++G + K +ELF M+ + + DD TF +LS C+ + ++ G + + K
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLT 460
Query: 469 QPRSAHYTCVVDLLGRFGLID-------------------------------EAMNLLNE 497
+ +VD+ + G ++ EA +L
Sbjct: 461 KNLFVG-NALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMR 519
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN-------NSGVYLILTEM 550
+ + GI + L AC N+ G G++V L ++G LI +M
Sbjct: 520 MNSCGIVSDGACLASTLKAC---TNVH-GLYQGKQVHCLSVKCGLDRVLHTGSSLI--DM 573
Query: 551 YLSCGRREDAKRIFAQMKE 569
Y CG EDA+++F+ M E
Sbjct: 574 YSKCGIIEDARKVFSSMPE 592
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 204/652 (31%), Positives = 331/652 (50%), Gaps = 60/652 (9%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSD-NVQGAKEVFDGM 78
D VT + ++ Y K LD+++ +F+++PE++ +++ +IAG +Q+D NV+G E+F M
Sbjct: 215 DVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGL-ELFKEM 273
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRV---FHGMPLKDVVSWNLVIGALV-----NCQRM 130
+ V S+ + + ALR+ H LK ++++G C RM
Sbjct: 274 QGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRM 333
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD--------------------- 169
A+ M + S+ ++ G R R +A K F
Sbjct: 334 ADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNAC 393
Query: 170 -------------KMPAKDVQAWNLMIA-GYLD--NGCVGVAE--DLFQKMHDRDLTSWK 211
+ K + N+ +A LD C +AE DLF M RD SW
Sbjct: 394 ASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWN 453
Query: 212 QLINGLVNSRRIDAAISYFKQM----PETCEKTWNSIISVLI-RNGLVK--EAHSYLEKY 264
+I + + +++F M E + T+ S++ R L E H+ + K
Sbjct: 454 AIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKS 513
Query: 265 PYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
+ +V Y + G + A K+ + + + WN +I G E+ KFF
Sbjct: 514 GMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFF 573
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
+M E G +PDN T+ +VL C++L T+ LG+QIHAQ IK + + ++ MY++C
Sbjct: 574 SRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKC 633
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
GN+Q + L F P D ++WN+++CG A+HG E+AL+LFE M+L + KP+ TFV VL
Sbjct: 634 GNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVL 693
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
AC++ GLVD+G +YFD M ++Y L P+S HY+C+VD+LGR G IDEA+NL+ ++
Sbjct: 694 RACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMP---F 750
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI 563
E +W LL C+IH N++V E A +++L+P +S ++L+ +Y G + +
Sbjct: 751 EADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEM 810
Query: 564 FAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
M+ N +KKEPGCSWI++ D H FL GD HP+ + L +L E++
Sbjct: 811 RKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQ 862
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 224/505 (44%), Gaps = 59/505 (11%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A +FDKM RD V++N +I GY G +D A F +MPERD+ ++N+VI+G +Q+
Sbjct: 103 ACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGEC 162
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYV---CNGL--IDEALRVFHGMPLK-----DVVSWN 118
+ + +VF M R V ++ V C L D ++V HG+ +K DVV+ +
Sbjct: 163 RKSIDVFLEMG-RCGVGFDRASLAVVLKACGALEECDMGVQV-HGLVVKFGFDCDVVTGS 220
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
++G C+R+D + S F E+ ++ SW+ M+ G V+ R VE +LF +M V
Sbjct: 221 ALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGV 280
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW--------KQLINGLVNSRRIDAAISYF 230
+ A + A L +++H L S ++ R+ A
Sbjct: 281 SQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVL 340
Query: 231 KQMPETCEKTWNSII----------------SVLIRNGL--------------------- 253
MP+ +++N+II +L++ GL
Sbjct: 341 SSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDL 400
Query: 254 -VKEAHSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
++ H ++ SNI ++ Y + + A +F++M RD WN +I
Sbjct: 401 EGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACE 460
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+N EE L F M S PD+ T+ SVL C+ L+ G +IH + IK +
Sbjct: 461 QNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSF 520
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
V A++ MY +CG I+ A ++SWN+II G + +E A + F RM
Sbjct: 521 VGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMG 580
Query: 432 FKPDDITFVGVLSACSYAGLVDQGR 456
PD+ T+ VL C+ V G+
Sbjct: 581 VNPDNFTYAAVLDTCANLATVGLGK 605
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 143/579 (24%), Positives = 248/579 (42%), Gaps = 89/579 (15%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
A+ +F G E V+ N ++ Y+ +D A +VF M L+DVVS+N +I +C M
Sbjct: 73 ARMIFCGFEPTTFVS-NCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEM 131
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
D+A +F EM RDV SW +++G ++ G ++ +F +M V +A L
Sbjct: 132 DIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVL-KA 190
Query: 191 CVGVAE-DLFQKMH--------DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
C + E D+ ++H D D+ + L+ +R+D ++S F ++PE +W
Sbjct: 191 CGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSW 250
Query: 242 NSIISVLIRNG--------------------------------------LVKEAHSYLEK 263
+++I+ ++N L KE HS+ K
Sbjct: 251 SAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALK 310
Query: 264 YPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ S+I T + Y + G + A KV M + +N +I G +D G + LK
Sbjct: 311 SAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKS 370
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F + ++G D T + L C+ + GRQ+H A+K V+NA++ MY +
Sbjct: 371 FQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGK 430
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
C + A F + D +SWN+II +G E+ L F M + +PDD T+ V
Sbjct: 431 CKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSV 490
Query: 443 LSACS--------------------------YAGLVDQGRYYFDC--MKNKYFLQPRSAH 474
L AC+ A LVD Y C ++ + R+
Sbjct: 491 LKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDM---YCKCGMIEKADKIHDRTEQ 547
Query: 475 YTCVV--DLLGRFGLI---DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
T V ++ F L+ ++A + + G+ + A+L C + +G+
Sbjct: 548 KTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQI 607
Query: 530 GERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQ 566
++++ E S VY+ L +MY CG +D++ +F +
Sbjct: 608 HAQIIKQEL-QSDVYICSTLVDMYSKCGNMQDSQLMFEK 645
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 217/486 (44%), Gaps = 58/486 (11%)
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
A K+FDKM +DV ++N +I+GY G + +A F +M +RD+ SW +I+G + +
Sbjct: 103 ACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGEC 162
Query: 224 DAAISYFKQMPETCEKTWN--SIISVLIRNGLVKEA------HSYLEKYPY-SNIASWTN 274
+I F +M C ++ S+ VL G ++E H + K+ + ++ + +
Sbjct: 163 RKSIDVFLEMGR-CGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSA 221
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ Y + + ++ VF + ++ W+ MI G +ND EGL+ F +M+ G
Sbjct: 222 LLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVS 281
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ + S+ C+ L L LG+++H+ A+K A V A + MYA+CG + A S
Sbjct: 282 QSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLS 341
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
S+P + S+N+II G A +AL+ F+ + T D+IT G L+AC+ +
Sbjct: 342 SMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLE 401
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI-RADGIEVSPTVWGAL 513
GR + K ++D+ G+ + EA +L + + R D + W A+
Sbjct: 402 GRQVHG-LAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVS-----WNAI 455
Query: 514 LGACR---------------IHNNIK-------------VGEIAGERVMELEPN------ 539
+ AC IH+ ++ G A ME+
Sbjct: 456 IAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGM 515
Query: 540 --NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
+S V L +MY CG E A +I + ++ + SW I G + + +H
Sbjct: 516 GFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTM-----VSWNAIISGFSLLQQSEDAH 570
Query: 598 PKFHRL 603
F R+
Sbjct: 571 KFFSRM 576
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 120/319 (37%), Gaps = 70/319 (21%)
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
++ P TF+ + CS +L+ G+Q HA+ I T VSN ++ MY +C +
Sbjct: 42 QTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLD 101
Query: 388 SALLEFSSVPIHDIISWNSIICGLA-------------------------------YHGY 416
A F + + D++S+NSII G A +G
Sbjct: 102 YACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGE 161
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG--------RYYFDC-MKNKYF 467
K++++F M D + VL AC D G ++ FDC +
Sbjct: 162 CRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSA 221
Query: 468 LQPRSAHYTCVVDLLGRFGLID---------------------EAMNLLNEIRADGIEVS 506
L A + D L F + E + L E++ G+ VS
Sbjct: 222 LLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVS 281
Query: 507 PTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
+++ +L +C + +++G E+ + ++ V +MY CGR DA+++ +
Sbjct: 282 QSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLS 341
Query: 566 QMKENGVKKEPGCSWIQIN 584
M P CS N
Sbjct: 342 SM--------PKCSLQSYN 352
>gi|302760949|ref|XP_002963897.1| hypothetical protein SELMODRAFT_80086 [Selaginella moellendorffii]
gi|300169165|gb|EFJ35768.1| hypothetical protein SELMODRAFT_80086 [Selaginella moellendorffii]
Length = 714
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 186/613 (30%), Positives = 311/613 (50%), Gaps = 14/613 (2%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ +A FD + + NVM+ Y +NG+LD A F++ P +D+ ++N +++G +
Sbjct: 8 VADAVICFDSIRNPTAFSHNVMVAAYAQNGYLDLAARTFDRTPNKDVVSWNGMLSGYARY 67
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
+ + AK FD M ++ V++N++IS + G + EA +F+ M ++D +WN++I
Sbjct: 68 GSFRDAKLFFDEMPYKNTVSYNTLISAFARQGNLAEARNLFNSMKIRDAATWNVLIAGYT 127
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
A F R+V +W M+ G + G + A +LF MP + WN +I+G
Sbjct: 128 QRCLCTHAREIFDRAPVRNVVTWNTMIGGYAQAGHLDNATELFGLMPQWNEVCWNALISG 187
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
N + A +LFQ + RD+ SW +I G V+S + A FK+MP T W +I+
Sbjct: 188 MGRNRRLPDALELFQALPFRDMVSWIAMIQGCVHSGDLHRAWDLFKRMPLTDVVIWTAIV 247
Query: 246 SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM-TTRDVTVWN 304
+ +G ++EA + P + A+ +I Y GE+ A +F+ RDV WN
Sbjct: 248 TAFAHSGFLQEARDLFDAIPIKDAAAVNAMIAAYGLHGEIARAKDLFDSAGDLRDVISWN 307
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
++ +N + L F M G PD +F S L C+ L L G+ +H + +
Sbjct: 308 ALLAAFSQNGHARQALGIFAGMDLEGIHPDGISFVSALDACTILTALREGKLLHEELLLA 367
Query: 365 ARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
++ + +++ A++ YA+CG + A F ++ D I NS++ A G A +A
Sbjct: 368 SQGEIFVEASLATALVNFYAKCGRLDEARSLFDAMAFCDAILLNSMLGAYAQSGRAGEAA 427
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
+LF+R L+ PD +TFV ++SACS+AGL+D G YF + + L P +AHYTC+VDL
Sbjct: 428 DLFQRAILSGIHPDAVTFVSMVSACSHAGLLDLGHRYFLSLVGDFALAPHAAHYTCMVDL 487
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSP--TVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
L R G + + +LL D + P T W +LL CR H ++ G R P
Sbjct: 488 LARTGHLMDGEDLL-----DAMPFQPEYTAWKSLLAGCRTHGDVGRGARLARRATNANPV 542
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
S Y++L+ +Y + G+ D + M ++K G S I I H F++G +HP+
Sbjct: 543 CSSPYVLLSRLYDAAGKHGDGISVRKAMDARRLRKPAGLSSITIKGRAHEFVAGGKNHPE 602
Query: 600 FHRLRYLLNLLHT 612
+ +L+ LH+
Sbjct: 603 ---ISAILDELHS 612
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 171/416 (41%), Gaps = 91/416 (21%)
Query: 157 REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
R G + +A FD + + N+M+A Y NG + +A F + ++D+ SW +++G
Sbjct: 4 RCGCVADAVICFDSIRNPTAFSHNVMVAAYAQNGYLDLAARTFDRTPNKDVVSWNGMLSG 63
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG------------------------ 252
A +F +MP ++N++IS R G
Sbjct: 64 YARYGSFRDAKLFFDEMPYKNTVSYNTLISAFARQGNLAEARNLFNSMKIRDAATWNVLI 123
Query: 253 -------LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV 305
L A ++ P N+ +W +I GY + G + +A ++F LM + WN
Sbjct: 124 AGYTQRCLCTHAREIFDRAPVRNVVTWNTMIGGYAQAGHLDNATELFGLMPQWNEVCWNA 183
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
+I G+G N + L+ F + P D ++ +++ C +H+ + A
Sbjct: 184 LISGMGRNRRLPDALELFQAL----PFRDMVSWIAMIQGC-----------VHSGDLHRA 228
Query: 366 RNQF-------TTVSNAMITMYARCGNIQSALLEFSSVPI-------------------- 398
+ F + A++T +A G +Q A F ++PI
Sbjct: 229 WDLFKRMPLTDVVIWTAIVTAFAHSGFLQEARDLFDAIPIKDAAAVNAMIAAYGLHGEIA 288
Query: 399 ------------HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
D+ISWN+++ + +G+A +AL +F M L PD I+FV L AC
Sbjct: 289 RAKDLFDSAGDLRDVISWNALLAAFSQNGHARQALGIFAGMDLEGIHPDGISFVSALDAC 348
Query: 447 SYAGLVDQGRYYFD----CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
+ + +G+ + + + F++ A T +V+ + G +DEA +L + +
Sbjct: 349 TILTALREGKLLHEELLLASQGEIFVEASLA--TALVNFYAKCGRLDEARSLFDAM 402
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MY RCG + A++ F S+ S N ++ A +GY + A F+R D ++
Sbjct: 1 MYGRCGCVADAVICFDSIRNPTAFSHNVMVAAYAQNGYLDLAARTFDRTP----NKDVVS 56
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
+ G+LS + G + +FD M K + Y ++ R G + EA NL N +
Sbjct: 57 WNGMLSGYARYGSFRDAKLFFDEMPYK-----NTVSYNTLISAFARQGNLAEARNLFNSM 111
Query: 499 R 499
+
Sbjct: 112 K 112
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 210/651 (32%), Positives = 326/651 (50%), Gaps = 45/651 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
++ R+ A+ F+++ +D WN+M+ GY G A+ + M + D T+N
Sbjct: 236 IKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWN 295
Query: 57 TVIAGLMQSDNVQGAKEVFDGME-VRD----VVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+I+G QS + A + F M ++D VV+W ++I+G NG EAL VF M L
Sbjct: 296 AIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVL 355
Query: 112 KDVVSWNLVIGALVN-CQRMDLAESYFKEMGARDVASWTIMV----------NGLV---R 157
+ V ++ I + V+ C + L R++ + I V N LV
Sbjct: 356 EGVKPNSITIASAVSACTNLSLLRH------GREIHGYCIKVEELDSDLLVGNSLVDYYA 409
Query: 158 EGRIVE-ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQ 212
+ R VE AR+ F + D+ +WN M+AGY G A +L +M + D+ +W
Sbjct: 410 KCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNG 469
Query: 213 LINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVLIRN-GLVKEAHSY-LEKY 264
L+ G AA+ +F++M P T + +RN L KE H Y L +
Sbjct: 470 LVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNH 529
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
+ + +I Y + A VF ++TRDV VWN +I ++ L
Sbjct: 530 IELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLR 589
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
+M S + T S L CS L L G++IH I+ + + N++I MY RCG
Sbjct: 590 EMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCG 649
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+IQ + F +P D++SWN +I HG+ A+ LF++ R KP+ ITF +LS
Sbjct: 650 SIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLS 709
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
ACS++GL+++G YF MK +Y + P Y C+VDLL R G +E + + ++ E
Sbjct: 710 ACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMP---FE 766
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ VWG+LLGACRIH N + E A + ELEP +SG Y+++ +Y + GR EDA +I
Sbjct: 767 PNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIR 826
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
MKE GV K PGCSWI++ H F+ GD+SHP ++ + L+ +I+
Sbjct: 827 CLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIK 877
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 150/626 (23%), Positives = 257/626 (41%), Gaps = 100/626 (15%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF----NQMPERDMFTYNTVIAG 61
+++A+ +FDKM +R+ +W ++ Y G + + LF N+ D F + V
Sbjct: 140 VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKA 199
Query: 62 LMQSDNVQGAKEVFDGM-----------------------------------EVRDVVTW 86
+ N + K+V+D M E +DV W
Sbjct: 200 CSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMW 259
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
N M+SGY G +AL+ M L D V+WN +I + + A YF EMG
Sbjct: 260 NIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGG 319
Query: 143 -----RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+V SWT ++ G + G EA +F KM + V+ ++ IA V +
Sbjct: 320 LKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIA-----SAVSACTN 374
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
L H R++ + + +D+ + NS++ + V+ A
Sbjct: 375 LSLLRHGREIHGY------CIKVEELDSDL-----------LVGNSLVDYYAKCRSVEVA 417
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR----DVTVWNVMIFGLGEN 313
+++ SW ++ GY G AI++ M + D+ WN ++ G +
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQY 477
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
G+ L+FF +M G P+ T + L C + L LG++IH ++ T V
Sbjct: 478 GDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVG 537
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
+A+I+MY+ C +++ A FS + D++ WNSII A G + AL+L M L++ +
Sbjct: 538 SALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVE 597
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC------VVDLLGRFGL 487
+ +T V L ACS + QG K + R TC ++D+ GR G
Sbjct: 598 VNTVTMVSALPACSKLAALRQG-------KEIHQFIIRCGLDTCNFILNSLIDMYGRCGS 650
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIH--NNIKVGEIAGERVMELEPNNSGVYL 545
I ++ + + + + W ++ +H V R M L+PN ++
Sbjct: 651 IQKSRRIFDLMPQRDL----VSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPN----HI 702
Query: 546 ILTEMYLSC---GRREDAKRIFAQMK 568
T + +C G E+ + F MK
Sbjct: 703 TFTNLLSACSHSGLIEEGWKYFKMMK 728
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 139/600 (23%), Positives = 251/600 (41%), Gaps = 110/600 (18%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAGLM 63
++QNL R +T +NG L+NA L + M P+ + Y +++
Sbjct: 41 KSQNLRKLTNARQRITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCR 100
Query: 64 QSDNVQ-----GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
+ N++ A+ V +G++V + + + ++ Y G +++A R+F M ++V SW
Sbjct: 101 KLYNLRLGFQVHAQLVVNGVDVCEFLG-SRLLEVYCQTGCVEDARRMFDKMSERNVFSWT 159
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEAR------KLFDKMP 172
++ + C D E+ + + +MVN VR V + +L +
Sbjct: 160 AIME--MYCGLGDYEET---------IKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRV 208
Query: 173 AKDVQAWNLMIAGYLDNGCVG--------------VAEDLFQKMHDRDLTSWKQLINGLV 218
KDV + L I G+ N CV +A F+++ +D+ W +++G
Sbjct: 209 GKDVYDYMLSI-GFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYT 267
Query: 219 NSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTN 274
+ A+ M + K TWN+IIS ++G +EA Y
Sbjct: 268 SKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKY-------------- 313
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+ EMG +K F+ +V W +I G +N E L F +M G P+
Sbjct: 314 ----FLEMG----GLKDFK----PNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPN 361
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIAR-NQFTTVSNAMITMYARCGNIQSALLEF 393
+ T S ++ C++L L GR+IH IK+ + V N+++ YA+C +++ A +F
Sbjct: 362 SITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF 421
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ D++SWN+++ G A G E+A+EL M+ +PD IT+ G+++
Sbjct: 422 GMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTG-------- 473
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
++G A+ + + G++ + T
Sbjct: 474 ----------------------------FTQYGDGKAALEFFQRMHSMGMDPNTTTISGA 505
Query: 514 LGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
L AC N+K+G EI G + ++GV L MY C E A +F+++ V
Sbjct: 506 LAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDV 565
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 175/406 (43%), Gaps = 36/406 (8%)
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLI-----------NGLVNSRRI----------DAAISY 229
C VA + + R LT+ +Q I NG++N+ + D I
Sbjct: 32 CCIVASTNTKSQNLRKLTNARQRITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEI 91
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
+ + + C K +N + + LV E + ++ Y + G V A
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLG-------SRLLEVYCQTGCVEDAR 144
Query: 290 KVFELMTTRDVTVWNV---MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
++F+ M+ R+V W M GLG+ EE +K F M G PD+ F V CS
Sbjct: 145 RMFDKMSERNVFSWTAIMEMYCGLGDY---EETIKLFYLMVNEGVRPDHFVFPKVFKACS 201
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
+L +G+ ++ + I + V +++ M+ +CG + A F + D+ WN
Sbjct: 202 ELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNI 261
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
++ G G +KAL+ M+L+ KPD +T+ ++S + +G ++ YF M
Sbjct: 262 MVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLK 321
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
+P +T ++ + G EA+++ ++ +G++ + + + AC + ++ G
Sbjct: 322 DFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHG 381
Query: 527 EIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQMKEN 570
+++E +S + + L + Y C E A+R F +K+
Sbjct: 382 REIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQT 427
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 188/608 (30%), Positives = 318/608 (52%), Gaps = 53/608 (8%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ Y K G A +F+ P ++FTYN +++ L + + +F M RD V
Sbjct: 45 NHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTV 104
Query: 85 TWNSMISGYVCNGLIDEALRVFHGM--------PLKDVVSW---------NLVIGALVNC 127
++N++I+G+ G A+R++H + P + +S + +G +C
Sbjct: 105 SYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHC 164
Query: 128 QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
Q + L +G+ V + M G I +A+++FD+M K+V +N MI G L
Sbjct: 165 QILRLGFGVNAFVGSPLVGMYAKM-------GLIGDAKRVFDEMDGKNVVMYNTMITGLL 217
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNS 243
V A LF+ M DRD +W ++ G + A+++F++M + T+ S
Sbjct: 218 RCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGS 277
Query: 244 IISVL-----IRNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEMGEVGSAIKVF 292
I++ + G K+ H+Y+ + Y + NV VG Y + + A F
Sbjct: 278 ILTACGALSALEQG--KQIHAYIIRTHYDD-----NVFVGSALVDMYSKCRSIKPAETAF 330
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
M+ +++ W +I G G+N EE ++ F +M+ G PD+ T SV++ C++L +L+
Sbjct: 331 RRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLE 390
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
G Q H A+ + TVSNA++T+Y +CG+I+ A F + HD +SW +++ G A
Sbjct: 391 EGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYA 450
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
G A++ ++LFE+M D KPD +TF+GVLSACS AG V++G YF M+ + + P
Sbjct: 451 QFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPID 510
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNE--IRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
HYTC++DL R G + EA + + + D I WG LL ACR+ ++++G+ A
Sbjct: 511 DHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIG-----WGTLLSACRLRGDMEIGQWAA 565
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVF 590
E ++E++P N Y++L M+ + G ++ M++ VKKEPGCSWI+ + H+F
Sbjct: 566 ENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIF 625
Query: 591 LSGDSSHP 598
+ D SHP
Sbjct: 626 SADDQSHP 633
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 177/425 (41%), Gaps = 68/425 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I +A+ +FD+M ++ V +N MI G + ++ A LF M +RD T+ T++ G Q+
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN 250
Query: 66 DNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLID-EALRVFHGMPLKDVVSWNLV 120
A F M + D T+ S+++ C L E + H ++ N+
Sbjct: 251 GLESQALNFFRRMRFQGIAIDQYTFGSILTA--CGALSALEQGKQIHAYIIRTHYDDNVF 308
Query: 121 IG-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
+G ALV+ C+ + AE+ F+ M +++ SWT ++ G + G EA ++F +M
Sbjct: 309 VGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
+ + + G + + C +A + + L++GL++ +
Sbjct: 369 IDPDDFTL-GSVISSCANLAS-----LEEGAQFHCLALVSGLMHYITVS----------- 411
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
N+++++ + G +++AH ++ + + SWT ++ GY + G I +FE M
Sbjct: 412 ------NALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKM 465
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG- 354
+DV PD TF VL+ CS ++ G
Sbjct: 466 LAKDV-------------------------------KPDGVTFIGVLSACSRAGFVEKGC 494
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAY 413
H+ MI +Y+R G ++ A +P+H D I W +++
Sbjct: 495 SYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRL 554
Query: 414 HGYAE 418
G E
Sbjct: 555 RGDME 559
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 146/333 (43%), Gaps = 57/333 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+R ++EA+ LF+ M RD +TW M+ G+ +NG A+ F +M + D +T+
Sbjct: 217 LRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFG 276
Query: 57 TV------IAGLMQS-------------DNV----------------QGAKEVFDGMEVR 81
++ ++ L Q DNV + A+ F M +
Sbjct: 277 SILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCK 336
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESYF 137
++++W ++I GY NG +EA+RVF M D + VI + N ++ +
Sbjct: 337 NIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFH 396
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ + + N LV + G I +A +LFD+M D +W ++ GY G
Sbjct: 397 CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAK 456
Query: 194 VAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMPE-----TCEKTWNSI 244
DLF+KM +D+ ++ +++ + ++ SYF M + + + +
Sbjct: 457 ETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCM 516
Query: 245 ISVLIRNGLVKEAHSYLEKYP-YSNIASWTNVI 276
I + R+G +KEA ++++ P + + W ++
Sbjct: 517 IDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLL 549
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 198/635 (31%), Positives = 332/635 (52%), Gaps = 51/635 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFK---------NGFLDNAMCLFNQM-PERD 51
+ R++EA + + M + T ++ + RG + G +A L + + P R
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNR- 82
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+ NT+++ + ++ A+ VFD + R++V+W +MI +V EA + + M L
Sbjct: 83 -YLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKL 141
Query: 112 ----KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVE 163
D V++ ++ A N + + L + E+ + T +V + G I +
Sbjct: 142 AGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISK 201
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
AR +FD++P K+V W L+IAGY G V VA +L + M ++ K ++
Sbjct: 202 ARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTT 261
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWT--NVIVGYFE 281
AA+ + K++ H Y+ + Y W ++I Y +
Sbjct: 262 PAALEHGKKV------------------------HRYIIQSGYGR-ELWVVNSLITMYCK 296
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
G + A K+F + RDV W M+ G + +E + F +M++ G PD TFTSV
Sbjct: 297 CGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSV 356
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
LT CS L G++IH Q + N + +A+++MYA+CG++ A L F+ + ++
Sbjct: 357 LTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNV 416
Query: 402 ISWNSIICGL-AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
++W +II G A HG +ALE F++M+ KPD +TF VLSAC++ GLV++GR +F
Sbjct: 417 VAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFR 476
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
M Y ++P HY+C VDLLGR G ++EA N+ I + P+VWGALL ACR+H
Sbjct: 477 SMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENV---ILSMPFIPGPSVWGALLSACRVH 533
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
++++ GE A E V++L+P++ G Y+ L+ +Y + GR EDA+++ M++ V KEPG SW
Sbjct: 534 SDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSW 593
Query: 581 IQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
I+++ HVF D SHP+ ++ L L +I+
Sbjct: 594 IEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIK 628
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 199/644 (30%), Positives = 333/644 (51%), Gaps = 38/644 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM---P--ERDMFTY 55
++ ++ +++ +FDKM RD ++W +I GY A+ LF+ M P +RD F
Sbjct: 101 VKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMI 160
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRD-----VVTWNSMISGYVCNGLIDEALRVFHGMP 110
+ + N+ E+ G V+ V +++I Y+ G I++ RVF M
Sbjct: 161 SVALKACGLGVNICFG-ELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMT 219
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA--SWTIMV-------NGLVREGRI 161
++VVSW +I LV+ A YF EM V S T + + L+ G+
Sbjct: 220 KRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKA 279
Query: 162 VEARKL---FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
+ + + FD+ N + Y G LF+KM D+ SW LI V
Sbjct: 280 IHTQTIKQGFDESSF----VINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYV 335
Query: 219 NSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLVK---EAHSYLEKYPYSNIAS 271
+ A+ FK+M ++ + T+ ++IS + K + H ++ + + S
Sbjct: 336 QKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALS 395
Query: 272 WTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
N IV Y + G + SA VF +T +D+ W+ +I + +E + M+ G
Sbjct: 396 VANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREG 455
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
P P+ +SVL++C + L+ G+Q+HA + I + V +A+I+MY++CG+++ A
Sbjct: 456 PKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEAS 515
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F+ + I++IISW ++I G A HGY+++A+ LFE++ KPD +TF+GVL+ACS+AG
Sbjct: 516 KIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAG 575
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
+VD G YYF M N+Y + P HY C++DLL R G + EA ++ IR+ VW
Sbjct: 576 MVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHM---IRSMPCYTDDVVW 632
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
LL +CR+H ++ G E+++ L+PN++G ++ L +Y + GR ++A I MK
Sbjct: 633 STLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSK 692
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
GV KE G SW+ +ND + F++GD +HP+ + +L LL I
Sbjct: 693 GVIKERGWSWVNVNDKLNAFVAGDQAHPQSEHITTVLELLSANI 736
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 200/469 (42%), Gaps = 70/469 (14%)
Query: 155 LVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLI 214
LV++G++ ++R +FDKM +D +W +IAGY++ A LF M W Q
Sbjct: 100 LVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNM-------WVQ-- 150
Query: 215 NGLVNSR-RIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWT 273
GL + I A+ + C N L+ VK +++ +
Sbjct: 151 PGLQRDQFMISVAL-------KACGLGVNICFGELLHGFSVKSG-------LINSVFVSS 196
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
+I Y ++G++ +VF+ MT R+V W +I GL E L +F +M S
Sbjct: 197 ALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGY 256
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D+ TF L +D L G+ IH Q IK ++ + V N + TMY +CG + F
Sbjct: 257 DSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLF 316
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC------- 446
+ + D++SW ++I G E A+E F+RMR ++ P+ TF V+SAC
Sbjct: 317 EKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAK 376
Query: 447 ----------------------------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
S +GL+ F + K + ++ +
Sbjct: 377 WGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIIS-----WSTI 431
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
+ + + G EA + L+ +R +G + + ++L C ++ G+ V+ +
Sbjct: 432 IAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGI 491
Query: 539 NNSG-VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
++ V+ L MY CG E+A +IF MK N + SW + +G
Sbjct: 492 DHEAMVHSALISMYSKCGSVEEASKIFNGMKINNI-----ISWTAMING 535
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 202/645 (31%), Positives = 324/645 (50%), Gaps = 49/645 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
+ EA+ LFDK + V+WNVMI GY G A LF M E D FT+ ++++
Sbjct: 79 VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSA 138
Query: 62 LMQSDNVQGAKE----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ +E V + D N++IS Y G + +A RVF M +D VSW
Sbjct: 139 CSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 198
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRI--------------VE 163
+ GA AES + G + ++ M+ VR RI +E
Sbjct: 199 TTLTGAY--------AESGY---GEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALE 247
Query: 164 ARK-----LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
K + + DV+ + Y+ G A ++F+ + RD+ +W +I G V
Sbjct: 248 KGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFV 307
Query: 219 NSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIAS 271
+S +++ A F +M E T+ +++S R G + KE H+ K +
Sbjct: 308 DSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVR 367
Query: 272 WTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
+ N ++ Y + G + A +VF+ M RDV W ++ + D E F QM + G
Sbjct: 368 FGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQG 427
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
+ T+ VL CS+ L G++IHA+ +K V+NA+++MY +CG+++ A+
Sbjct: 428 VKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAI 487
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F + + D+++WN++I GL +G +AL+ +E M+ +P+ TFV VLSAC
Sbjct: 488 RVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCN 547
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
LV++GR F M Y + P HY C+VD+L R G + EA +++ I ++ S +W
Sbjct: 548 LVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTI---PLKPSAAMW 604
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
GALL ACRIH N+++GE A E ++LEP N+G+Y+ L+ +Y + G D ++ MKE
Sbjct: 605 GALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKER 664
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
GVKKEPG SWI+I H F++ D SHP+ + L L +++
Sbjct: 665 GVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMK 709
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 144/587 (24%), Positives = 252/587 (42%), Gaps = 71/587 (12%)
Query: 10 QNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAGLMQS 65
Q L K PQ D+ + +++ K L + + + +++ NT++
Sbjct: 17 QYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHC 76
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
+V A+++FD + VV+WN MISGY GL EA +F M
Sbjct: 77 GSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLM---------------- 120
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
Q+ L F + S ++N GR + R + + A D N +I+
Sbjct: 121 --QQERLEPDKFTFVSILSACSSPAVLNW----GREIHVR-VMEAGLANDTTVGNALISM 173
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI-SYFKQMPETCEKTWNSI 244
Y G V A +F M RD SW L S + ++ +Y + E + +
Sbjct: 174 YAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITY 233
Query: 245 ISVLIRNGLV------KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
++VL G + K+ H+++ + Y S++ T + Y + G A +VFE ++
Sbjct: 234 MNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSY 293
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
RDV WN MI G ++ EE F +M E G +PD AT+T+VL+ C+ L G++I
Sbjct: 294 RDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEI 353
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
HA+A K NA+I MY++ G+++ A F +P D++SW +++ A
Sbjct: 354 HARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQV 413
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACS-----------YAGLVDQG----------- 455
++ F++M K + IT++ VL ACS +A +V G
Sbjct: 414 VESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNAL 473
Query: 456 -RYYFDCMKNKYFLQPRSA-------HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
YF C + ++ + ++ LG+ G EA+ ++++G+ +
Sbjct: 474 MSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNA 533
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
+ +L ACR+ N ++ G R + G+ + TE + +C
Sbjct: 534 ATFVNVLSACRVCNLVE----EGRRQFAFMSKDYGI--VPTEKHYAC 574
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 186/444 (41%), Gaps = 62/444 (13%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G + EAR+LFDK K V +WN+MI+GY G A +LF M L
Sbjct: 77 GSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERL----------- 125
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNV 275
E + T+ SI+S ++ +E H + + +N + N
Sbjct: 126 ----------------EPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNA 169
Query: 276 IVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ Y + G V A +VF+ M +RD W + E+ GEE LK + M + P
Sbjct: 170 LISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPS 229
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
T+ +VL+ C L L+ G+QIHA ++ + VS A+ MY +CG + A F
Sbjct: 230 RITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFE 289
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+ D+I+WN++I G G E+A F RM PD T+ VLSAC+ G + +
Sbjct: 290 CLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLAR 349
Query: 455 GR---------------YYFDCMKNKYFLQPRSAHYTCVVD------------LLGRFGL 487
G+ + + + N Y V D LLGR+
Sbjct: 350 GKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYAD 409
Query: 488 ID---EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGV 543
D E+ ++ G++ + + +L AC +K G EI E V + V
Sbjct: 410 CDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAV 469
Query: 544 YLILTEMYLSCGRREDAKRIFAQM 567
L MY CG EDA R+F M
Sbjct: 470 TNALMSMYFKCGSVEDAIRVFEGM 493
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
M+ ++A+ +F+ + RD + WN MIRG+ +G L+ A F++M E D TY
Sbjct: 276 MKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYT 335
Query: 57 TVIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
TV++ + + KE+ DG+ V DV N++I+ Y G + +A +VF MP
Sbjct: 336 TVLSACARPGGLARGKEIHARAAKDGL-VSDVRFGNALINMYSKAGSMKDARQVFDRMPK 394
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
+DVVSW ++G +C ++ + + FK+M + V + I +++ A K ++
Sbjct: 395 RDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEI 454
Query: 172 PAKDVQA--------WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL-VNSRR 222
A+ V+A N +++ Y G V A +F+ M RD+ +W LI GL N R
Sbjct: 455 HAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRG 514
Query: 223 IDAAISYFKQMPETCEKTWNSIISVL 248
++A Y E + ++VL
Sbjct: 515 LEALQRYEVMKSEGMRPNAATFVNVL 540
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 6/147 (4%)
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
++ E + KP+ +L ++ G V++ R FD NK + + ++
Sbjct: 49 QVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVS-----WNVMISG 103
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNN 540
GL EA NL ++ + +E + ++L AC + G RVME N+
Sbjct: 104 YAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLAND 163
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQM 567
+ V L MY CG DA+R+F M
Sbjct: 164 TTVGNALISMYAKCGSVRDARRVFDAM 190
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 196/619 (31%), Positives = 326/619 (52%), Gaps = 30/619 (4%)
Query: 6 IQEAQNLFDKM-PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIA 60
+ +A+ +FD+ +R+ V+WN ++ Y KN +A+ +F +M + F ++ V+
Sbjct: 151 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 210
Query: 61 GLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
S N+ ++V M VR DV T N+++ YV G +D A +F MP DVV
Sbjct: 211 ACTGSRNIDAGRQVH-AMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVV 269
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE----GRIVEARKLFDKM 171
SWN +I V A +M + + M++ +++ G R++ M
Sbjct: 270 SWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 329
Query: 172 PAKDVQAWNLMIAGYLD----NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
+ + + + G +D N + A +F M RDL W LI+G + R D A
Sbjct: 330 IKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAF 389
Query: 228 SYFKQMPETCEKTWNSIISVLIRN-------GLVKEAHSYLEKYPYSNIASWTN-VIVGY 279
S F + + + ++ ++++ ++ H+ EK + A N +I Y
Sbjct: 390 SIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSY 449
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
++ + AI+VFE ++ D+ MI L + D GE +K F++M G PD +
Sbjct: 450 WKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLS 509
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
S+L C+ L + G+Q+HA IK NA++ YA+CG+I+ A L FSS+P
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 569
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
++SW+++I GLA HG+ ++ALELF RM P+ IT VL AC++AGLVD+ + YF
Sbjct: 570 GVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYF 629
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
+ MK + + HY+C++DLLGR G +D+AM L+N + + + +VWGALLGA R+
Sbjct: 630 NSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP---FQANASVWGALLGASRV 686
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
H + ++G++A E++ LEP SG +++L Y S G + ++ MK++ +KKEP S
Sbjct: 687 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMS 746
Query: 580 WIQINDGGHVFLSGDSSHP 598
W+++ D H F+ GD SHP
Sbjct: 747 WVEVKDKVHTFIVGDKSHP 765
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 137/588 (23%), Positives = 243/588 (41%), Gaps = 98/588 (16%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC-QR 129
A+ VFD + V+W+S+++ Y NGL A++ FHGM + V + ++ C
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD 115
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVRE----GRIVEARKLFDKMPA-KDVQAWNLMIA 184
L A S + N LV G + +AR++FD+ + ++ +WN +++
Sbjct: 116 AQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMS 175
Query: 185 GYLDNGCVGVAEDLFQKM---------------------------------------HDR 205
Y+ N G A +F +M +++
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEK 235
Query: 206 DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
D+ + L++ V R+D A F++MP++ +WN++IS + NG A L +
Sbjct: 236 DVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 266 YS----NIASWTNVI-----VGYFEMGE------------------------------VG 286
S N+ ++++ G F++G +
Sbjct: 296 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 355
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A+KVF+ M+ RD+ +WN +I G +E F +++ G + T +VL +
Sbjct: 356 DAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTA 415
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
L RQ+HA A KI V N +I Y +C + A+ F DII+ S
Sbjct: 416 SLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTS 475
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
+I L+ + E A++LF M +PD +L+AC+ +QG+ + +
Sbjct: 476 MITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 535
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
F+ A +V + G I++A + + G+ W A++G H + K
Sbjct: 536 FMSDAFAG-NALVYTYAKCGSIEDAELAFSSLPERGV----VSWSAMIGGLAQHGHGKRA 590
Query: 527 -EIAGERVME-LEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKE 569
E+ G V E + PN ++ +T + +C G ++AKR F MKE
Sbjct: 591 LELFGRMVDEGINPN----HITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 186/434 (42%), Gaps = 26/434 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ R+ A +F+KMP D V+WN +I G NG A+ L QM + +++
Sbjct: 248 VKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLS 307
Query: 61 GLMQSDNVQGAKEV---FDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++++ GA ++ G ++ D ++ Y N +D+A++VF M +
Sbjct: 308 SILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR 367
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
D++ WN +I + R D A S F + + + +++ +EA ++
Sbjct: 368 DLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVH 427
Query: 173 AK--------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
A D N +I Y C+ A +F++ D+ + +I L +
Sbjct: 428 ALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGE 487
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLV-------KEAHSYLEKYPYSNIASWTNVIV 277
AI F +M + ++S L+ K+ H++L K + + A N +V
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 547
Query: 278 -GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A F + R V W+ MI GL ++ G+ L+ F +M + G +P++
Sbjct: 548 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 607
Query: 337 TFTSVLTICSDLPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
T TSVL C+ +D R ++ ++ + MI + R G + A+ +S
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 667
Query: 396 VPIHDIIS-WNSII 408
+P S W +++
Sbjct: 668 MPFQANASVWGALL 681
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 102/269 (37%), Gaps = 39/269 (14%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T + LT + L G +HA +K ++ N +I+ Y++C A F +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLK--SGFLASLRNHLISFYSKCRRPCCARRVFDEI 63
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
P +SW+S++ + +G A++ F MR ++ VL A L Q
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQ-- 121
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA---------------- 500
+ M + A +V + G FG +D+A + +E +
Sbjct: 122 VHAMAMATGFGSDVFVA--NALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVK 179
Query: 501 -----DGIEV---------SPTVWG--ALLGACRIHNNIKVGEIAGERVMELE-PNNSGV 543
D I+V PT +G ++ AC NI G V+ + +
Sbjct: 180 NDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFT 239
Query: 544 YLILTEMYLSCGRREDAKRIFAQMKENGV 572
L +MY+ GR + A IF +M ++ V
Sbjct: 240 ANALVDMYVKMGRVDIASVIFEKMPDSDV 268
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 193/636 (30%), Positives = 337/636 (52%), Gaps = 47/636 (7%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGLMQSDN 67
+FD++ + WN M+R Y ++ + A+ L+ M + D +TY V+
Sbjct: 97 IFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLL 156
Query: 68 VQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
G KE+ D G + DV N++I+ Y G + +A ++F P+ D VSWN ++
Sbjct: 157 EFGGKEIHDHVLKVGFD-SDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILA 215
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
V ++ A+ F +M R++ + M+ L + G+++EA KLF++M KD+ +W+ +
Sbjct: 216 GYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSAL 275
Query: 183 IAGYLDNGCVGVAEDLFQKMHDR-------------------DLTSWKQLINGLVNSRRI 223
I+GY NG A +F +M+ + ++I+GLV I
Sbjct: 276 ISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGI 335
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMG 283
++ ++ N++I + +G + +A + SW ++I G + G
Sbjct: 336 ESYVNL-----------QNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCG 384
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
V A +F++M +D+ W+ +I G ++D E L F +M+ PD SV++
Sbjct: 385 SVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVIS 444
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
C+ L LD G+ +HA K + ++ MY +CG +++AL F+ + + S
Sbjct: 445 ACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSS 504
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
WN++I GLA +G E++L++F M+ P++ITF+GVL AC + GLVD+GR +F M
Sbjct: 505 WNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMI 564
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV--WGALLGACRIHN 521
K+ ++P HY C+VDLLGR GL++EA L+ + + ++P V WGALLGAC+ H
Sbjct: 565 EKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLI-----ESMPMAPDVATWGALLGACKKHG 619
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
+ ++GE G +++EL+P++ G +++L+ ++ S G ED + MK+ GV K PGCS I
Sbjct: 620 DTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLI 679
Query: 582 QINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
+ N H FL+GD +HP +++ +LN + ++ E
Sbjct: 680 EANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKME 715
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 234/468 (50%), Gaps = 42/468 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++A+ LFD+ P D+V+WN ++ GY K G ++ A +F+QMP+R++ N++I L +
Sbjct: 192 MRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKM 251
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLV 120
V A ++F+ M+ +D+V+W+++ISGY NG+ +EAL +F +GM L +VV V
Sbjct: 252 GQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVV----V 307
Query: 121 IGALVNCQRMDLAES------YFKEMGARDVASWTIMVNGLVR----EGRIVEARKLFDK 170
+ L C + + ++ MG + S+ + N L+ G I++A+KLF+
Sbjct: 308 VSVLSACAHLSIVKTGKMIHGLVIRMG---IESYVNLQNALIHMYSGSGEIMDAQKLFNG 364
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
D +WN MI+G + G V A LF M ++D+ SW +I+G ++ F
Sbjct: 365 SHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALF 424
Query: 231 KQM------PETCEKTWNSIISVLIRNGLVKEA---HSYLEKYPYS-NIASWTNVIVGYF 280
+M P+ E S+IS + + H+Y+ K N+ T ++ Y
Sbjct: 425 HEMQLGQIRPD--ETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYM 482
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G V +A++VF M + V+ WN +I GL N L E L F +MK +G P+ TF
Sbjct: 483 KCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMG 542
Query: 341 VLTICSDLPTLDLGRQIHAQAI-KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
VL C + +D GR A I K M+ + R G + A S+P+
Sbjct: 543 VLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMA 602
Query: 400 -DIISWNSIICGLAYHGYAEKALELFERM--RLTDFKPDDITFVGVLS 444
D+ +W +++ HG E+ ER+ +L + +PD F +LS
Sbjct: 603 PDVATWGALLGACKKHGDT----EMGERVGRKLIELQPDHDGFHVLLS 646
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 156/345 (45%), Gaps = 29/345 (8%)
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
K +N I+S +I G + + + +S + + + ++++F+ +
Sbjct: 55 KQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGL----------DYSLQIFDRIENS 104
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
+ +WN M+ +++ E+ L + M ++ PDN T+ V+ C+ G++IH
Sbjct: 105 NGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIH 164
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
+K+ + V N +I MYA CGN++ A F P+ D +SWNSI+ G G E
Sbjct: 165 DHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVE 224
Query: 419 KALELFERMRLTDFKPDD--ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
+A +F++M + + I +G + G V + F+ M K + ++
Sbjct: 225 EAKLIFDQMPQRNIVASNSMIVLLGKM------GQVMEAWKLFNEMDEKDMVS-----WS 273
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
++ + G+ +EA+ + E+ A+G+ + V ++L AC + +K G++ V+ +
Sbjct: 274 ALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRM 333
Query: 537 EPNN-SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
+ + L MY G DA+++F NG SW
Sbjct: 334 GIESYVNLQNALIHMYSGSGEIMDAQKLF-----NGSHNLDQISW 373
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 142/317 (44%), Gaps = 49/317 (15%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
+ I +AQ LF+ D ++WN MI G K G ++ A LF+ MPE+D+ +++ VI+G
Sbjct: 352 SGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGY 411
Query: 63 MQSDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
Q D +F M++ D S+IS +D+ + H K+ + N
Sbjct: 412 AQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQG-KWVHAYIRKNGLKVN 470
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+++G T +++ ++ G + A ++F+ M K V +
Sbjct: 471 VILG--------------------------TTLLDMYMKCGCVENALEVFNGMEEKGVSS 504
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR----IDAAISYFKQMP 234
WN +I G NG V + D+F +M + + + G++ + R +D +F M
Sbjct: 505 WNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMI 564
Query: 235 ETCE-----KTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVI-----VGYFEMG 283
E K + ++ +L R GL+ EA +E P + ++A+W ++ G EMG
Sbjct: 565 EKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMG 624
Query: 284 E-VGSAIKVFELMTTRD 299
E VG K+ EL D
Sbjct: 625 ERVGR--KLIELQPDHD 639
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 196/619 (31%), Positives = 326/619 (52%), Gaps = 30/619 (4%)
Query: 6 IQEAQNLFDKM-PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIA 60
+ +A+ +FD+ +R+ V+WN ++ Y KN +A+ +F +M + F ++ V+
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 61 GLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
S N+ ++V M VR DV T N+++ YV G +D A +F MP DVV
Sbjct: 118 ACTGSRNIDAGRQVH-AMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVV 176
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE----GRIVEARKLFDKM 171
SWN +I V A +M + + M++ +++ G R++ M
Sbjct: 177 SWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 236
Query: 172 PAKDVQAWNLMIAGYLD----NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
+ + + + G +D N + A +F M RDL W LI+G + R D A
Sbjct: 237 IKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAF 296
Query: 228 SYFKQMPETCEKTWNSIISVLIRN-------GLVKEAHSYLEKYPYSNIASWTN-VIVGY 279
S F + + + ++ ++++ ++ H+ EK + A N +I Y
Sbjct: 297 SIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSY 356
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
++ + AI+VFE ++ D+ MI L + D GE +K F++M G PD +
Sbjct: 357 WKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLS 416
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
S+L C+ L + G+Q+HA IK NA++ YA+CG+I+ A L FSS+P
Sbjct: 417 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 476
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
++SW+++I GLA HG+ ++ALELF RM P+ IT VL AC++AGLVD+ + YF
Sbjct: 477 GVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYF 536
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
+ MK + + HY+C++DLLGR G +D+AM L+N + + + +VWGALLGA R+
Sbjct: 537 NSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP---FQANASVWGALLGASRV 593
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
H + ++G++A E++ LEP SG +++L Y S G + ++ MK++ +KKEP S
Sbjct: 594 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMS 653
Query: 580 WIQINDGGHVFLSGDSSHP 598
W+++ D H F+ GD SHP
Sbjct: 654 WVEVKDKVHTFIVGDKSHP 672
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 226/513 (44%), Gaps = 37/513 (7%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVF-HGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
DV N++++ Y G +D+A RVF ++ VSWN ++ A V + A F EM
Sbjct: 41 DVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM 100
Query: 141 GARDVA----SWTIMVNGLVREGRIVEARKLFDKMP----AKDVQAWNLMIAGYLDNGCV 192
+ ++ +VN I R++ + KDV N ++ Y+ G V
Sbjct: 101 VWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRV 160
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT----WNSIISVL 248
+A +F+KM D D+ SW LI+G V + AI QM + +SI+
Sbjct: 161 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKAC 220
Query: 249 IRNG---LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE----VGSAIKVFELMTTRDVT 301
G L ++ H ++ K +N S + VG +M + A+KVF+ M+ RD+
Sbjct: 221 AGAGAFDLGRQIHGFMIK---ANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLI 277
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
+WN +I G +E F +++ G + T +VL + L RQ+HA A
Sbjct: 278 LWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALA 337
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
KI V N +I Y +C + A+ F DII+ S+I L+ + E A+
Sbjct: 338 EKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAI 397
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
+LF M +PD +L+AC+ +QG+ + + F+ A +V
Sbjct: 398 KLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAG-NALVYT 456
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVME-LEPN 539
+ G I++A + + G+ W A++G H + K E+ G V E + PN
Sbjct: 457 YAKCGSIEDAELAFSSLPERGV----VSWSAMIGGLAQHGHGKRALELFGRMVDEGINPN 512
Query: 540 NSGVYLILTEMYLSC---GRREDAKRIFAQMKE 569
++ +T + +C G ++AKR F MKE
Sbjct: 513 ----HITMTSVLCACNHAGLVDEAKRYFNSMKE 541
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 117/526 (22%), Positives = 222/526 (42%), Gaps = 31/526 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ R+ A +F+KMP D V+WN +I G NG A+ L QM + +++
Sbjct: 155 VKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLS 214
Query: 61 GLMQSDNVQGAKEV---FDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++++ GA ++ G ++ D ++ Y N +D+A++VF M +
Sbjct: 215 SILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR 274
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
D++ WN +I + R D A S F + + + +++ +EA ++
Sbjct: 275 DLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVH 334
Query: 173 AK--------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
A D N +I Y C+ A +F++ D+ + +I L +
Sbjct: 335 ALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGE 394
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLV-------KEAHSYLEKYPYSNIASWTNVIV 277
AI F +M + ++S L+ K+ H++L K + + A N +V
Sbjct: 395 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 454
Query: 278 -GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A F + R V W+ MI GL ++ G+ L+ F +M + G +P++
Sbjct: 455 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 514
Query: 337 TFTSVLTICSDLPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
T TSVL C+ +D R ++ ++ + MI + R G + A+ +S
Sbjct: 515 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 574
Query: 396 VPIHDIIS-WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA--GLV 452
+P S W +++ H E L +L +P+ + VL A +YA G+
Sbjct: 575 MPFQANASVWGALLGASRVHKDPE--LGKLAAEKLFILEPEK-SGTHVLLANTYASSGMW 631
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
++ MK+ + + + V D + F + D++ + EI
Sbjct: 632 NEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEI 677
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 6/176 (3%)
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV-PIHDIISWNS 406
+P LG Q+HA A+ V+NA++ MY G + A F + +SWN
Sbjct: 20 VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNG 79
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
++ + A+++F M + +P + F V++AC+ + +D GR M +
Sbjct: 80 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGR-QVHAMVVRM 138
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
+ +VD+ + G +D A +++ E D VS W AL+ C ++ +
Sbjct: 139 GYEKDVFTANALVDMYVKMGRVDIA-SVIFEKMPDSDVVS---WNALISGCVLNGH 190
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 202/661 (30%), Positives = 329/661 (49%), Gaps = 86/661 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER---------- 50
+++ R+ +A +LFD+MP+++ V W ++ GY +NG + A+ +F M E
Sbjct: 59 VKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACN 118
Query: 51 -----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
D + + +I + ++ AKEVFD M+
Sbjct: 119 AALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSP 178
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN--LVIGALVNCQRM---DLAESY 136
DVV + S+IS + NG + A M LK + N + L C R+ +
Sbjct: 179 DVVGYTSLISAFCRNGEFELAAEALIQM-LKQGLKPNEHTMTTILTACPRVLGQQIHGYL 237
Query: 137 FKEMGARD--VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
K++G R V S T +++ R G A+ +FD + K+V +W M+ Y+ +G +
Sbjct: 238 IKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEE 297
Query: 195 AEDLFQKMHDRDLTSWK---QLINGLVNSRRIDAAI--SYFKQMPETCEKTWNSIISVLI 249
A +F M + + ++ G S + + S K T + N+++S+
Sbjct: 298 ALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYG 357
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
R GLV+E + L K ++ SWT I F+
Sbjct: 358 RTGLVEELEAMLNKIENPDLVSWTTAISANFQ---------------------------- 389
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
N GE+ + QM G +P+ F+SVL+ C+D+ +LD G Q H A+K+ +
Sbjct: 390 ---NGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSE 446
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
NA+I MY++CG + SA L F + HD+ SWNS+I G A HG A KALE+F +MR
Sbjct: 447 ICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRS 506
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
KPDD TF+GVL C+++G+V++G +F M ++Y P +HY C++D+LGR G D
Sbjct: 507 NGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFD 566
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
EA+ ++N++ E +W LL +C++H N+ +G++A +R+MEL +S Y++++
Sbjct: 567 EALRMINDMP---FEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSN 623
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNL 609
+Y G EDA+++ +M E GVKK+ GCSWI+IN+ H F S D SHP + +L
Sbjct: 624 IYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGE 683
Query: 610 L 610
L
Sbjct: 684 L 684
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 130/539 (24%), Positives = 227/539 (42%), Gaps = 57/539 (10%)
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFK 138
E DVV ++ V +G + +AL +F MP K+VV+W V+ R + A + F
Sbjct: 44 ESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFA 103
Query: 139 EMGARDVASWTIMVN---------GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
+M VA N G +R G V + + A D + +I Y
Sbjct: 104 DMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGF-AGDAWIGSCLIEMYSRC 162
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI----DAAISYFKQMPETCEKTWNSII 245
G + A+++F +M D+ + LI+ + +A I KQ + E T +I+
Sbjct: 163 GSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTIL 222
Query: 246 SVLIRNGLVKEAHSYLEK---YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
+ R L ++ H YL K ++ S T +I Y GE A VF+ + ++V
Sbjct: 223 TACPRV-LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVS 281
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
W M+ + EE L+ F M G P+ + VL C ++ LGRQ+H AI
Sbjct: 282 WCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAI 338
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
K VSNA+++MY R G ++ + + D++SW + I +G+ EKA+
Sbjct: 339 KHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIA 398
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
L +M F P+ F VLS+C+ +DQG F C+ K ++++
Sbjct: 399 LLCQMHSEGFTPNGYAFSSVLSSCADVASLDQG-MQFHCLALKLGCDSEICTGNALINMY 457
Query: 483 GRFGLI-------------------------------DEAMNLLNEIRADGIEVSPTVWG 511
+ G + ++A+ + +++R++GI+ + +
Sbjct: 458 SKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFL 517
Query: 512 ALLGACRIHNNIKVGEIAGERVME---LEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+L C ++ GE+ +++ P S Y + +M GR ++A R+ M
Sbjct: 518 GVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSH-YACMIDMLGRNGRFDEALRMINDM 575
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 195/639 (30%), Positives = 338/639 (52%), Gaps = 41/639 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGLMQ 64
A+ +F M D VT+N +I G+ + G + A+ +F++M D T +++A
Sbjct: 198 AERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACAS 257
Query: 65 SDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
++Q K++ GM D +T S++ YV G I+ A +F+ +VV WNL
Sbjct: 258 VGDLQKGKQLHSYLLKAGMSF-DYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNL 316
Query: 120 VIGALVNCQRMDLAESY--FKEMGARDVAS---------WTIMVNGLVREGRIVEARKLF 168
++ A Q DLA+S+ F +M A + T G + G + + +
Sbjct: 317 MLVAYG--QISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIK 374
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+ + D+ ++I Y GC+ A + + + RD+ SW +I G V + A++
Sbjct: 375 NGFES-DMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALA 433
Query: 229 YFKQMPETCEKTWNSIISVL-----------IRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
FK+M + W I + +R GL A Y+ Y ++I+ W ++
Sbjct: 434 TFKEMQDC--GVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYA-ADISIWNTLVN 490
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y G A +F + +D WN +I G G++ L ++ L F++M ++G + T
Sbjct: 491 LYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFT 550
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F S ++ ++L + G+Q+H +A+K T V+NA+I++Y +CG+I+ A + FS +
Sbjct: 551 FISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMS 610
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ + +SWN+II + HG +AL+LF++M+ KP+D+TF+GVL+ACS+ GLV++G
Sbjct: 611 LRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLS 670
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
YF M N Y L P HY CVVD+LGR G +D A ++E+ I + +W LL AC
Sbjct: 671 YFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMP---ITANAMIWRTLLSAC 727
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
++H NI++GE+A + ++ELEP++S Y++L+ Y G+ + ++ MK+ G++KEPG
Sbjct: 728 KVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPG 787
Query: 578 CSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
SWI++ + H F GD HP ++ L+ L+ + +
Sbjct: 788 RSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSK 826
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 130/545 (23%), Positives = 241/545 (44%), Gaps = 33/545 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N + +A+ +F ++ RD V+W M+ GY ++G A L++QM + V++
Sbjct: 90 KNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSS 149
Query: 62 LMQSDN-----VQG---AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
++ + QG +V+ + N++I+ Y+ G A RVF M D
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCD 209
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKLFD 169
V++N +I C + A F EM G R D + ++ G + + ++L
Sbjct: 210 RVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHS 269
Query: 170 KMPAKDVQAWNLMIAG-----YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
+ K +++ + G Y+ G + A D+F ++ W ++ +
Sbjct: 270 YL-LKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLA 328
Query: 225 AAISYFKQMPETC----EKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIV 277
+ F QM T + T+ I+ G L ++ HS K + + + V++
Sbjct: 329 KSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLI 388
Query: 278 G-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A K+ E++ RDV W MI G ++D EE L F +M++ G PDN
Sbjct: 389 DMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNI 448
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
S + C+ + + G QIHA+ ++ N ++ +YARCG + A F +
Sbjct: 449 GLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREI 508
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
D I+WN +I G ++AL +F +M K + TF+ +SA + + QG+
Sbjct: 509 EHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGK 568
Query: 457 -YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
+ +K + + A+ ++ L G+ G I++A + +E+ EVS W ++
Sbjct: 569 QVHGRAVKTGHTSETEVAN--ALISLYGKCGSIEDAKMIFSEMSLRN-EVS---WNTIIT 622
Query: 516 ACRIH 520
+C H
Sbjct: 623 SCSQH 627
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 134/545 (24%), Positives = 237/545 (43%), Gaps = 80/545 (14%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQR 129
A++VF + RD V+W +M+SGY +GL EA R++ M V+ V+ ++++ C +
Sbjct: 97 ARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTK 156
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
L +GR++ A +++ + + N +IA YL
Sbjct: 157 -----------------------GKLFAQGRMIHA-QVYKQAFCSETFVGNALIALYLGF 192
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSII 245
G +AE +F M D ++ LI+G + A+ F +M + + T S++
Sbjct: 193 GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252
Query: 246 SVLIRNGLV---KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
+ G + K+ HSYL K S + + +++ Y + G++ +A +F L +V
Sbjct: 253 AACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVV 312
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
+WN+M+ G+ + + F QM+ +G P+ T+ +L C+ ++LG QIH+ +
Sbjct: 313 LWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLS 372
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
IK VS +I MY++ G + A + D++SW S+I G H + E+AL
Sbjct: 373 IKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEAL 432
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH---YTCV 478
F+ M+ PD+I SAC+ + QG + + ++ +A + +
Sbjct: 433 ATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ----IHARVYVSGYAADISIWNTL 488
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL---GACRIHN-------------- 521
V+L R G +EA +L EI W L+ G R++
Sbjct: 489 VNLYARCGRSEEAFSLFREIE----HKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGA 544
Query: 522 ------------------NIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
+IK G ++ G V + + V L +Y CG EDAK
Sbjct: 545 KYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKM 604
Query: 563 IFAQM 567
IF++M
Sbjct: 605 IFSEM 609
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 150/327 (45%), Gaps = 15/327 (4%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-- 237
NL+I Y NG V A +F+++ RD SW +++G S A + QM T
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVI 141
Query: 238 --EKTWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKV 291
+S++S + L + H+ + K + + N ++ Y G A +V
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F M D +N +I G + GE L+ F +M+ SG PD T S+L C+ + L
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
G+Q+H+ +K + +++ +Y +CG+I++A F+ +++ WN ++
Sbjct: 262 QKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAY 321
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD-CMKNKYFLQP 470
K+ E+F +M+ T P+ T+ +L C+ G ++ G +KN +
Sbjct: 322 GQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGF---- 377
Query: 471 RSAHYTC--VVDLLGRFGLIDEAMNLL 495
S Y ++D+ ++G +D+A +L
Sbjct: 378 ESDMYVSGVLIDMYSKYGCLDKARKIL 404
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 153/329 (46%), Gaps = 39/329 (11%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G V A +VF+ +++RD W M+ G ++ LG+E + + QM + P
Sbjct: 88 YAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVL 147
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+SVL+ C+ GR IHAQ K A T V NA+I +Y G+ + A F +
Sbjct: 148 SSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLF 207
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
D +++N++I G A G+ E AL++F+ M+L+ +PD +T +L+AC+ G + +G+
Sbjct: 208 CDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQL 267
Query: 459 ----------FDCMKNKYFL-------QPRSAH-------------YTCVVDLLGRFGLI 488
FD + L +AH + ++ G+ +
Sbjct: 268 HSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDL 327
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN---SGVYL 545
++ + +++A GI + + +L C I++ GE++ L N S +Y+
Sbjct: 328 AKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIEL----GEQIHSLSIKNGFESDMYV 383
Query: 546 --ILTEMYLSCGRREDAKRIFAQMKENGV 572
+L +MY G + A++I +++ V
Sbjct: 384 SGVLIDMYSKYGCLDKARKILEMLEKRDV 412
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 156/354 (44%), Gaps = 35/354 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ +A+ + + + +RD V+W MI GY ++ F + A+ F +M + ++ N +A +
Sbjct: 397 LDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLAS--AA 454
Query: 66 DNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
G K + G+++ D+ WN++++ Y G +EA +F + KD +
Sbjct: 455 SACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEI 514
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGL-----VREGRIVEARK 166
+WN +I + A F +MG +V ++ ++ L +++G+ V R
Sbjct: 515 TWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRA 574
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ + + N +I+ Y G + A+ +F +M R+ SW +I R A
Sbjct: 575 V-KTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEA 633
Query: 227 ISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEK----YPYSNIASWTNVIVG 278
+ F QM + K T+ +++ GLV+E SY + Y + I +V
Sbjct: 634 LDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVD 693
Query: 279 YF-EMGEVGSAIK-VFELMTTRDVTVWNVMIFGLGEN---DLGEEGLKFFVQMK 327
G++ A + V E+ T + +W ++ + ++GE K ++++
Sbjct: 694 ILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELE 747
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 93/242 (38%), Gaps = 35/242 (14%)
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+IHA ++ + N +I +YA+ G + A F + D +SW +++ G A G
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
++A L+ +M T P VLSAC+ L QGR + + F
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 476 TCVVDLL--GRFGLIDE----------------------------AMNLLNEIRADGIEV 505
+ L G F L + A+ + +E++ G+
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI---LTEMYLSCGRREDAKR 562
+LL AC +++ G+ + L+ S Y+ L ++Y+ CG E A
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYL--LKAGMSFDYITEGSLLDLYVKCGDIETAHD 301
Query: 563 IF 564
IF
Sbjct: 302 IF 303
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 189/634 (29%), Positives = 320/634 (50%), Gaps = 50/634 (7%)
Query: 5 RIQEAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-----ERDMFTYNT 57
R+++A FD +P +RDTV N M+ + + A+ +F+ + D +++
Sbjct: 107 RLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTA 166
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+I+ + Q N+ + C+ L A V VS
Sbjct: 167 LISAVGQMHNLAAPH-----------------CTQLHCSVLKSGAAAVLS-------VS- 201
Query: 118 NLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
N +I + C + A EM +D +WT MV G VR G + AR +F+++ K
Sbjct: 202 NALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGK 261
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYF 230
WN MI+GY+ +G A +LF++M D ++ +++ N+ S
Sbjct: 262 FDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVH 321
Query: 231 KQM--------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
Q+ PE N+++++ + G + A + ++ SW ++ GY +
Sbjct: 322 GQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDS 381
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G + A++VF++M ++ W VM+ G L E+ LK F QM+ P + T+ +
Sbjct: 382 GCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAI 441
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
C +L L GRQ+HA ++ + NA++TMYA+CG + A L F +P D +
Sbjct: 442 AACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSV 501
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
SWN++I L HG+ +ALELF++M PD I+F+ +L+AC++AGLVD+G +YF+ M
Sbjct: 502 SWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESM 561
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
K + + P HY ++DLLGR G I EA +L I+ E +P++W A+L CR + +
Sbjct: 562 KRDFGISPGEDHYARLIDLLGRSGRIGEARDL---IKTMPFEPTPSIWEAILSGCRTNGD 618
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
++ G A +++ + P + G Y++L+ Y + GR DA R+ M++ GVKKEPGCSWI+
Sbjct: 619 MEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIE 678
Query: 583 INDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+ HVFL GD+ HP+ + L ++ + +
Sbjct: 679 VGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRK 712
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 164/397 (41%), Gaps = 96/397 (24%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+R + A+++F+++ + V WN MI GY ++G +A LF +M D FT+
Sbjct: 243 VRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFT 302
Query: 57 TVIAG------LMQSDNVQG---------------------------------AKEVFDG 77
+V++ + +V G AK +FD
Sbjct: 303 SVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDT 362
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF 137
M ++DVV+WN+++SGY+ +G +D+A+ VF MP K+ +SW +++ V+ + A F
Sbjct: 363 MNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLF 422
Query: 138 KEMGARDVASWTIMVNGLV---------------------------------------RE 158
+M A DV G + +
Sbjct: 423 NQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKC 482
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLI 214
G + +AR +F MP D +WN MI+ +G A +LF +M D D S+ ++
Sbjct: 483 GAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTIL 542
Query: 215 NGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
++ +D YF+ M E + +I +L R+G + EA ++ P+
Sbjct: 543 TACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPT 602
Query: 270 AS-WTNVIVGYFEMGEVG----SAIKVFELMTTRDVT 301
S W ++ G G++ +A ++F ++ D T
Sbjct: 603 PSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGT 639
>gi|225432410|ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Vitis vinifera]
Length = 623
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 200/619 (32%), Positives = 307/619 (49%), Gaps = 49/619 (7%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+F + I L + + A+ +FD M +D V WN+M++ Y GL +AL +FH M +
Sbjct: 5 LFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRI 64
Query: 112 KD-------------------------------VVSW--------NLVIGALVNCQRMDL 132
+ VVS N +I C
Sbjct: 65 ANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATS 124
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A F+EM + SW ++ G AR +FD MP K AWN+MI+GY G V
Sbjct: 125 ARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDV 184
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT-W-------NSI 244
+ LF+KM + L + + LVN+ SY M K+ W NSI
Sbjct: 185 ELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSI 244
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
+S + G + E SW +I + ++G+ A VF+L ++V W
Sbjct: 245 LSFYSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWT 304
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
MI G N GE+ L FFV+M E+ PD+ TF +VL CS L TL G+ IH I
Sbjct: 305 SMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHY 364
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+ + V N ++ MYA+CG+IQ + F + D++SWN+++ GL HG+A +ALEL+
Sbjct: 365 GFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELY 424
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
E M + KPD +TF+G+L CS++GL+++G+ F+ M + Y L + H C+VDLLGR
Sbjct: 425 EEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGR 484
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G + +A L++E G ++ ALLGAC H+ +++G GE + EP Y
Sbjct: 485 GGYLAQARELVDEYSRTG-RAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSY 543
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
++L+ +Y G+ ++A+ + M ++GVKK PGCSWI++ + VF++G+ SHP L
Sbjct: 544 VLLSNLYCVSGQWKEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVFVAGNHSHPYMEELC 603
Query: 605 YLLNLLHTEIEREILFDAY 623
+LN L E+ R F +
Sbjct: 604 KILNFLKFEM-RNPFFSGF 621
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 201/473 (42%), Gaps = 87/473 (18%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYN- 56
RI A+ LFD+MP +DTV WN M+ Y + G A+CLF+ M P+R FT
Sbjct: 19 GRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRFTFTATL 78
Query: 57 ------------------TVIAGLMQSDNV--------------QGAKEVFDGMEVRDVV 84
V++G S V A+ VF+ M + + V
Sbjct: 79 SACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMNEV 138
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
+W S++ Y +GL D A VF GMP K ++WN++I C ++L FK+M
Sbjct: 139 SWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDS 198
Query: 145 VA--SWTI-----------------MVNGLVREGRIVEARKL-------FDKMPAKD--- 175
+ WT M++G + + V+A ++ + K+ KD
Sbjct: 199 LQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKLGCKDDVM 258
Query: 176 ----------VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
+WN MI ++ G A +FQ ++++ SW +I G + +
Sbjct: 259 KVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQ 318
Query: 226 AISYFKQMPETC----EKTWNSII---SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
A+S+F +M E + T+ +++ S L G K H + Y + N +V
Sbjct: 319 ALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVN 378
Query: 279 -YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + G++ + F+ + +D+ WN M+FGLG + + L+ + +M SG PD T
Sbjct: 379 MYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVT 438
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKI-ARNQFTTVSNAMITMYARCGNIQSA 389
F +L CS ++ G+ + + + +Q T M+ + R G + A
Sbjct: 439 FIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQA 491
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 152/347 (43%), Gaps = 51/347 (14%)
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
+S++ T+ IV ++G + SA ++F+ M +D WN M+ + L ++ L F
Sbjct: 2 HSHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHH 61
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ + PD TFT+ L+ C+ L L G +IHAQ + V N++I MY +C +
Sbjct: 62 MRIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLS 121
Query: 386 IQSA------------------LLEFSSVPIHDI-------------ISWNSIICGLAYH 414
SA L ++S + D+ I+WN +I G
Sbjct: 122 ATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQC 181
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP---R 471
G E L LF++MR +PD TF +++A L + + M + + ++ +
Sbjct: 182 GDVELCLGLFKKMREDSLQPDQWTFSALVNA-----LCELQEPSYGYMMHGFIIKSGWVK 236
Query: 472 SAHYT-CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI-A 529
+ + ++ + G D+ M + I GI ++ W A++ A ++K+G+
Sbjct: 237 AVEVSNSILSFYSKLGCKDDVMKVFESI---GI-LTQVSWNAMIDA-----HMKIGDTHE 287
Query: 530 GERVMELEPNNSGV-YLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
V +L P + V + + Y G E A F +M EN ++ +
Sbjct: 288 AFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPD 334
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 54/221 (24%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
M+ EA +F P+++ V+W MI GY +NG + A+ F +M E D FT+
Sbjct: 280 MKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFG 339
Query: 57 TVIA-------------------------------GLM----QSDNVQGAKEVFDGMEVR 81
V+ GL+ + ++QG+ F + +
Sbjct: 340 AVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGK 399
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAE--- 134
D+V+WN+M+ G +G +AL ++ M D V++ IG L+ C L E
Sbjct: 400 DLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTF---IGLLMTCSHSGLIEKGQ 456
Query: 135 SYFKEMG-----ARDVASWTIMVNGLVREGRIVEARKLFDK 170
+ F+ M +++ MV+ L R G + +AR+L D+
Sbjct: 457 ALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDE 497
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 130/301 (43%), Gaps = 38/301 (12%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ Y K G D+ M +F + ++N +I M+ + A VF ++VV
Sbjct: 242 NSILSFYSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVV 301
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
+W SMI+GY NG ++AL F M + + GA+++ A S +G
Sbjct: 302 SWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLH------ACSSLATLGHGK 355
Query: 145 VASWTI--------------MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
+ +I +VN + G I + F ++ KD+ +WN M+ G +G
Sbjct: 356 MIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHG 415
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLV----NSRRIDAAISYFKQMPET---CEKTWNS 243
A +L+++M + K GL+ +S I+ + F+ M ++T +
Sbjct: 416 HATQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHV 475
Query: 244 I--ISVLIRNGLVKEAHSYLEKYPYSNIA--SWTNVIVGY-FEMGEV------GSAIKVF 292
+ + +L R G + +A +++Y + A S ++G F EV G +KVF
Sbjct: 476 VCMVDLLGRGGYLAQARELVDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVF 535
Query: 293 E 293
E
Sbjct: 536 E 536
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 189/612 (30%), Positives = 323/612 (52%), Gaps = 53/612 (8%)
Query: 21 TVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
T N ++ Y K G A +F+ MP ++FTYN +++ L + + + +F M
Sbjct: 41 TYLLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQ 100
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGM--------PLKDVVSW---------NLVIGA 123
RD+V++N++I+G+ G +A+RV+ + P + +S + +G
Sbjct: 101 RDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGK 160
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
+CQ + L GA + +V+ + + +A++ FD++ +K+V +N MI
Sbjct: 161 QFHCQILRLG------FGANAFVG-SPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMI 213
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEK 239
G L V A LF+ M DRD +W ++ G + A+ F++M +
Sbjct: 214 TGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQY 273
Query: 240 TWNSIISVL-----IRNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEMGEVGSA 288
T+ SI++ + G K+ H+Y+ + Y + NV VG Y + + A
Sbjct: 274 TFGSILTACGALSALEQG--KQIHAYIIRTRYDD-----NVFVGSALVDMYSKCRSIKLA 326
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
VF MT +++ W +I G G+N EE ++ F +M+ G PD+ T SV++ C++L
Sbjct: 327 ETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANL 386
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
+L+ G Q H A+ + TVSNA++T+Y +CG+I+ A F + HD +SW +++
Sbjct: 387 ASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 446
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
G A G A++ ++LFE+M KPD +TF+GVLSACS AG V++GR YF M+ + +
Sbjct: 447 SGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGI 506
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNE--IRADGIEVSPTVWGALLGACRIHNNIKVG 526
P HYTC++DL R G + EA + + + D I WG LL ACR+ ++++G
Sbjct: 507 VPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIG-----WGTLLSACRLRGDMEIG 561
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
+ A E ++E++P N Y++L M+ + G+ + ++ M++ VKKEPGCSWI+ +
Sbjct: 562 KWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNK 621
Query: 587 GHVFLSGDSSHP 598
H+F + D SHP
Sbjct: 622 VHIFSADDQSHP 633
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 179/425 (42%), Gaps = 68/425 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ +A+ FD++ ++ V +N MI G + ++ A LF M +RD T+ T++ G Q+
Sbjct: 191 VGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQN 250
Query: 66 DNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLID-EALRVFHGMPLKDVVSWNLV 120
A E+F M + D T+ S+++ C L E + H ++ N+
Sbjct: 251 GLESEALEIFRRMRFQGIAIDQYTFGSILTA--CGALSALEQGKQIHAYIIRTRYDDNVF 308
Query: 121 IG-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
+G ALV+ C+ + LAE+ F+ M +++ SWT ++ G + G EA ++F +M
Sbjct: 309 VGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
+ + + G + + C +A + + L++GL++ +
Sbjct: 369 IDPDDYTL-GSVISSCANLAS-----LEEGAQFHCLALVSGLMHYITVS----------- 411
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
N+++++ + G +++AH ++ + + SWT ++ GY + G I +FE M
Sbjct: 412 ------NALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKM 465
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+ G PD TF VL+ CS ++ GR
Sbjct: 466 LAK-------------------------------GVKPDGVTFIGVLSACSRAGFVEKGR 494
Query: 356 Q-IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAY 413
H+ MI +Y+R G ++ A +P+H D I W +++
Sbjct: 495 SYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRL 554
Query: 414 HGYAE 418
G E
Sbjct: 555 RGDME 559
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 146/333 (43%), Gaps = 57/333 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+R ++EA+ LF+ M RD++TW M+ G+ +NG A+ +F +M + D +T+
Sbjct: 217 LRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFG 276
Query: 57 TV------IAGLMQSDNVQG-----------------------------AKEVFDGMEVR 81
++ ++ L Q + A+ VF M +
Sbjct: 277 SILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCK 336
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESYF 137
++++W ++I GY NG +EA+RVF M D + VI + N ++ +
Sbjct: 337 NIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFH 396
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ + + N LV + G I +A +LFD+M D +W +++GY G
Sbjct: 397 CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAK 456
Query: 194 VAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPE-----TCEKTWNSI 244
DLF+KM + D ++ +++ + ++ SYF M + + + +
Sbjct: 457 ETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCM 516
Query: 245 ISVLIRNGLVKEAHSYLEKYP-YSNIASWTNVI 276
I + R+G +KEA ++++ P + + W ++
Sbjct: 517 IDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLL 549
>gi|302802806|ref|XP_002983157.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
gi|300149310|gb|EFJ15966.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
Length = 704
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 186/618 (30%), Positives = 329/618 (53%), Gaps = 18/618 (2%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
N + A+ +FD++P + V+WN +I G+ ++GF+ NA +F +MP ++N++I G
Sbjct: 7 NGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWNSMITGY 66
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRV-FHGMPLKDVVSWNLVI 121
QS ++ GA +FD +V++WN++I+GY N +I EA V F MP ++ VSWN ++
Sbjct: 67 AQSGDLAGATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVIFDEMPRREEVSWNALL 126
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
A + LA S F+ M DV +WT ++ + G++ EA L+D +P +D+ AW
Sbjct: 127 SAYAQAGHVHLARSTFERMPRHDVVAWTALIAVSGQNGQLEEAEVLYDLIPERDLVAWTA 186
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
+I Y NG + ++ ++ M +R+ S +I + + A +P+ + T
Sbjct: 187 LIQAYGVNGQLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTLPDPDQSTR 246
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
S+I +NG +K+A + ++ + ++ Y + A +F+ + + +
Sbjct: 247 TSMIVAYAQNGYIKDAREMFDSIKNPDVIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLV 306
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN M+ + +E F + P + + + + +DL A+
Sbjct: 307 SWNTMVAAYAQAGNLDEAKSIFDSI------PHKNVVSHNVMVVAYAHNMDLAE---ARR 357
Query: 362 IKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
I + ++ TV+ AM+ M A+ G + A F+ +P +++SWNS+I G+A G+ A
Sbjct: 358 IFYSMDEKDTVTWTAMVAMLAQHGRLAEAQELFAKMPYRNVVSWNSLIAGMASCGHGMAA 417
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
+ MR KPD ITF+G+L ACS+ GLV++G +F M+ + L P HY +VD
Sbjct: 418 VRYLYVMRNEGAKPDHITFMGILIACSHVGLVEEGWTHFTSMQGDHGLIPWREHYCRMVD 477
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTV--WGALLGACRIHNNIKVGEIAGERVMELEP 538
+LGR G + A LL + + P V WG+LLG+C+ H+++K+G A E +++ +
Sbjct: 478 VLGRAGQLGAARELL-----ETMPFIPDVGAWGSLLGSCKTHSDVKLGTRAAESLLQFDD 532
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+SG Y++L MY S GR DA + +MK GVKK+PG S I+++ H F++G++SHP
Sbjct: 533 QSSGPYVLLANMYSSVGRVADALAVRNRMKARGVKKQPGVSLIRVDGVLHRFVAGEASHP 592
Query: 599 KFHRLRYLLNLLHTEIER 616
+ + L+ L +++
Sbjct: 593 RHQEILSELSRLQELMKK 610
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 129/567 (22%), Positives = 222/567 (39%), Gaps = 111/567 (19%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N +++EA+ L+D +P+RD V W +I+ Y NG L + ++ MPER+ ++ +I
Sbjct: 162 QNGQLEEAEVLYDLIPERDLVAWTALIQAYGVNGQLTESKRVYALMPERNRVSHTAMIIA 221
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
Q+ V A+++ D + D T SMI Y NG I +A +F + DV++ N ++
Sbjct: 222 YSQNGEVVQARKMLDTLPDPDQSTRTSMIVAYAQNGYIKDAREMFDSIKNPDVIACNAMM 281
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
A + Q +D A++ F + + + SW MV + G + EA+ +FD +P K+V + N+
Sbjct: 282 EAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPHKNVVSHNV 341
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
M+ Y N + A +F M ++D +W ++ L R+ A F +MP
Sbjct: 342 MVVAYAHNMDLAEARRIFYSMDEKDTVTWTAMVAMLAQHGRLAEAQELFAKMP------- 394
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
Y N+ SW ++I G G
Sbjct: 395 ------------------------YRNVVSWNSLIAGMASCGH----------------- 413
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
G +++ M+ G PD+ TF +L CS H
Sbjct: 414 --------------GMAAVRYLYVMRNEGAKPDHITFMGILIACS-----------HVGL 448
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG----LAYHGYA 417
++ FT++ H +I W C L G
Sbjct: 449 VEEGWTHFTSMQGD-----------------------HGLIPWREHYCRMVDVLGRAGQL 485
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
A EL E M F PD + +L +C V G + + F S Y
Sbjct: 486 GAARELLETM---PFIPDVGAWGSLLGSCKTHSDVKLGTRAAESLLQ--FDDQSSGPYVL 540
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
+ ++ G + +A+ + N ++A G++ P V +L+ + + GE + R E+
Sbjct: 541 LANMYSSVGRVADALAVRNRMKARGVKKQPGV--SLIRVDGVLHRFVAGEASHPRHQEIL 598
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIF 564
S L E+ G + D K +
Sbjct: 599 SELSR----LQELMKKAGYQPDTKAVL 621
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 120/282 (42%), Gaps = 39/282 (13%)
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
+ V NG + A + ++ P N+ SW ++I G+ + G + +A ++F M + WN
Sbjct: 1 MQVYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWN 60
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
MI G ++ L M + P + ++ +++T SD + + + ++
Sbjct: 61 SMITGYAQSG----DLAGATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVIFD--EM 114
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
R + + NA+++ YA+ G++ A F +P HD+++W ++I +G E+A L+
Sbjct: 115 PRREEVSW-NALLSAYAQAGHVHLARSTFERMPRHDVVAWTALIAVSGQNGQLEEAEVLY 173
Query: 425 -------------------------ERMRLTDFKPD--DITFVGVLSACSYAGLVDQGRY 457
E R+ P+ ++ ++ A S G V Q R
Sbjct: 174 DLIPERDLVAWTALIQAYGVNGQLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQARK 233
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
D + + P + T ++ + G I +A + + I+
Sbjct: 234 MLDTLPD-----PDQSTRTSMIVAYAQNGYIKDAREMFDSIK 270
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 189/634 (29%), Positives = 320/634 (50%), Gaps = 50/634 (7%)
Query: 5 RIQEAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-----ERDMFTYNT 57
R+++A FD +P +RDTV N M+ + + A+ +F+ + D +++
Sbjct: 109 RLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTA 168
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+I+ + Q N+ + C+ L A V VS
Sbjct: 169 LISAVGQMHNLAAPH-----------------CTQLHCSVLKSGAAAVLS-------VS- 203
Query: 118 NLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
N +I + C + A EM +D +WT MV G VR G + AR +F+++ K
Sbjct: 204 NALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGK 263
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYF 230
WN MI+GY+ +G A +LF++M D ++ +++ N+ S
Sbjct: 264 FDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVH 323
Query: 231 KQM--------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
Q+ PE N+++++ + G + A + ++ SW ++ GY +
Sbjct: 324 GQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDS 383
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G + A++VF++M ++ W VM+ G L E+ LK F QM+ P + T+ +
Sbjct: 384 GCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAI 443
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
C +L L GRQ+HA ++ + NA++TMYA+CG + A L F +P D +
Sbjct: 444 AACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSV 503
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
SWN++I L HG+ +ALELF++M PD I+F+ +L+AC++AGLVD+G +YF+ M
Sbjct: 504 SWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESM 563
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
K + + P HY ++DLLGR G I EA +L I+ E +P++W A+L CR + +
Sbjct: 564 KRDFGISPGEDHYARLIDLLGRSGRIGEARDL---IKTMPFEPTPSIWEAILSGCRTNGD 620
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
++ G A +++ + P + G Y++L+ Y + GR DA R+ M++ GVKKEPGCSWI+
Sbjct: 621 MEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIE 680
Query: 583 INDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+ HVFL GD+ HP+ + L ++ + +
Sbjct: 681 VGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRK 714
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 164/397 (41%), Gaps = 96/397 (24%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+R + A+++F+++ + V WN MI GY ++G +A LF +M D FT+
Sbjct: 245 VRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFT 304
Query: 57 TVIAG------LMQSDNVQG---------------------------------AKEVFDG 77
+V++ + +V G AK +FD
Sbjct: 305 SVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDT 364
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF 137
M ++DVV+WN+++SGY+ +G +D+A+ VF MP K+ +SW +++ V+ + A F
Sbjct: 365 MNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLF 424
Query: 138 KEMGARDVASWTIMVNGLV---------------------------------------RE 158
+M A DV G + +
Sbjct: 425 NQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKC 484
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLI 214
G + +AR +F MP D +WN MI+ +G A +LF +M D D S+ ++
Sbjct: 485 GAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTIL 544
Query: 215 NGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
++ +D YF+ M E + +I +L R+G + EA ++ P+
Sbjct: 545 TACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPT 604
Query: 270 AS-WTNVIVGYFEMGEVG----SAIKVFELMTTRDVT 301
S W ++ G G++ +A ++F ++ D T
Sbjct: 605 PSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGT 641
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 209/652 (32%), Positives = 331/652 (50%), Gaps = 55/652 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
++ I +A+ +FD M +RD +W VMI G ++G A LF QM ++ TY +
Sbjct: 367 KSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLS 426
Query: 58 VI--AGLMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
++ + + + ++ K V E + D+ N++I Y G ID+A VF GM
Sbjct: 427 ILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCD 486
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEM-------------------GARDVASWTIMV 152
+DV+SWN ++G L A + F +M G+ D W V
Sbjct: 487 RDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEV 546
Query: 153 NGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
+ E ++ D + + I Y+ G + A LF K+ R +T+W
Sbjct: 547 HKHAVETGLIS-----------DFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNA 595
Query: 213 LINGLVNSRRIDAAISYFKQMP-ETCEKTWNSIISVLIRN------GLVKEAHSYLEKYP 265
+I G R A+S F QM E + I++L N VKE HS+
Sbjct: 596 MIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAG 655
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
++ ++ Y + G V A +VF+ M R+VT W +MI GL ++ G + F+Q
Sbjct: 656 LVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQ 715
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M G PD T+ S+L+ C+ L+ +++H A+ V NA++ MYA+CG+
Sbjct: 716 MLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGS 775
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
I A F + D+ SW +I GLA HG +AL+ F +M+ FKP+ ++V VL+A
Sbjct: 776 IDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTA 835
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA-MNLLNEIRADGIE 504
CS+AGLVD+GR F M Y ++P HYTC+VDLLGR GL++EA + +LN IE
Sbjct: 836 CSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNM----PIE 891
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
WGALLGAC + N+++ E A + ++L+P ++ Y++L+ +Y + G+ E +
Sbjct: 892 PDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVR 951
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+ M+ G++KEPG SWI++++ H F+ GD+SHP+ + LN L IER
Sbjct: 952 SMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDL---IER 1000
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 166/638 (26%), Positives = 288/638 (45%), Gaps = 76/638 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+R R+Q A+ +FDK+ +++ W MI GY + G ++AM ++++M + + TY
Sbjct: 164 IRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYL 223
Query: 57 TVIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+++ N++ K++ G + DV ++++ YV G I++A +F M
Sbjct: 224 SILKACCCPVNLKWGKKIHAHIIQSGFQ-SDVRVETALVNMYVKCGSIEDAQLIFDKMVE 282
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKL 167
++V+SW ++IG L + R A F +M + ++ ++N G + +++
Sbjct: 283 RNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEV 342
Query: 168 FDKMP----AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
A D++ N ++ Y +G + A +F M +RD+ SW +I GL R
Sbjct: 343 HSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRG 402
Query: 224 DAAISYFKQMPET-CEKTWNSIISVLIRNGL--------VKEAHSYLEKYPY-SNIASWT 273
A S F QM C + +S+L + + VK H + E+ + S++
Sbjct: 403 QEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGN 462
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
+I Y + G + A VF+ M RDV WN M+ GL +N G E F+QM++ G P
Sbjct: 463 ALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVP 522
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D+ T+ S+L L+ ++H A++ V +A I MY RCG+I A L F
Sbjct: 523 DSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLF 582
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA-------- 445
+ + + +WN++I G A +AL LF +M+ F PD TF+ +LSA
Sbjct: 583 DKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALE 642
Query: 446 --------CSYAGLVDQG------RYYFDCMKNKY-------FLQPRSAHYTCVVDLLGR 484
+ AGLVD Y C KY ++ +T ++ L +
Sbjct: 643 WVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQ 702
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC----------RIHNNIKVGEIAGERVM 534
G +A + ++ +GI T + ++L AC +HN+ ++ V
Sbjct: 703 HGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNH----AVSAGLVS 758
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+L N+ L MY CG +DA+ +F M E V
Sbjct: 759 DLRVGNA-----LVHMYAKCGSIDDARSVFDDMVERDV 791
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 149/337 (44%), Gaps = 53/337 (15%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y G + A +VF+ + +++ +W MI G E E+ ++ + +M++ P+ T+
Sbjct: 163 YIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITY 222
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
S+L C L G++IHA I+ V A++ MY +CG+I+ A L F +
Sbjct: 223 LSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVE 282
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL------- 451
++ISW +I GLA++G ++A LF +M+ F P+ T+V +L+A + AG
Sbjct: 283 RNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEV 342
Query: 452 ----------------------------VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
+D R FD M + +T ++ L
Sbjct: 343 HSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFS-----WTVMIGGLA 397
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN-----IKVGEIAGER---VME 535
+ G EA +L +++ +G + T + ++L A I + +KV E + +
Sbjct: 398 QHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISD 457
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
L N+ L MY CG +DA+ +F M + V
Sbjct: 458 LRIGNA-----LIHMYAKCGSIDDARLVFDGMCDRDV 489
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 54/294 (18%)
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
LK VQ G + D+ ++ ++L C + L +Q+H IK Q V+N ++ +
Sbjct: 106 LKIRVQ---QGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRV 162
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y RCG +Q A F + +I W ++I G A +G+AE A+ ++++MR +P++IT+
Sbjct: 163 YIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITY 222
Query: 440 VGVLSACS-----------------------------------YAGLVDQGRYYFDCMKN 464
+ +L AC G ++ + FD M
Sbjct: 223 LSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVE 282
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
+ + +T ++ L +G EA +L +++ +G + + ++L A N
Sbjct: 283 RNVIS-----WTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNA-----NAS 332
Query: 525 VGEIAGERVMELEPNNSGVYL------ILTEMYLSCGRREDAKRIFAQMKENGV 572
G + + + N+G+ L L MY G +DA+ +F M E +
Sbjct: 333 AGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDI 386
>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 306/612 (50%), Gaps = 55/612 (8%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+F + I L + + A+ +FD M +D V WN+M++ Y GL +AL +FH M +
Sbjct: 5 LFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRI 64
Query: 112 KD-------------------------------VVSW--------NLVIGALVNCQRMDL 132
+ VVS N +I C
Sbjct: 65 ANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATS 124
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A F+EM + SW ++ G AR +FD MP K AWN+MI+GY G V
Sbjct: 125 ARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDV 184
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT-WNSIISVLIRN 251
+ LF+KM + L + + LVN+ SY M K+ W+ ++ V
Sbjct: 185 ELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESI 244
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
G++ + SW +I + ++G+ A VF+L ++V W MI G
Sbjct: 245 GILTQV-------------SWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYA 291
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
N GE+ L FFV+M E+ PD+ TF +VL CS L TL G+ IH I + +
Sbjct: 292 RNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVD 351
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
V N ++ MYA+CG+IQ + F + D++SWN+++ GL HG+A +ALEL+E M +
Sbjct: 352 VGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASG 411
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
KPD +TF+G+L CS++GL+++G+ F+ M + Y L + H C+VDLLGR G + +A
Sbjct: 412 MKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQA 471
Query: 492 MNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMY 551
L++E G ++ ALLGAC H+ +++G GE + EP Y++L+ +Y
Sbjct: 472 RELVDEYSRTG-RAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLY 530
Query: 552 LSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLH 611
G+ ++A+ + M ++GVKK PGCSWI++ + VF++G+ SHP L +LN L
Sbjct: 531 CVSGQWKEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVFVAGNHSHPYMEELCKILNFLK 590
Query: 612 TEIEREILFDAY 623
E+ R F +
Sbjct: 591 FEM-RNPFFSGF 601
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 200/453 (44%), Gaps = 67/453 (14%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYN- 56
RI A+ LFD+MP +DTV WN M+ Y + G A+CLF+ M P+R FT
Sbjct: 19 GRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRFTFTATL 78
Query: 57 ------------------TVIAGLMQSDNV--------------QGAKEVFDGMEVRDVV 84
V++G S V A+ VF+ M + + V
Sbjct: 79 SACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMNEV 138
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
+W S++ Y +GL D A VF GMP K ++WN++I C ++L FK+M
Sbjct: 139 SWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDS 198
Query: 145 VA--SWTI--MVN----------GLVREGRIVEA-----RKLFDKMPAKDVQAWNLMIAG 185
+ WT +VN G + G I+++ K+F+ + +WN MI
Sbjct: 199 LQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIGILTQVSWNAMIDA 258
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTW 241
++ G A +FQ ++++ SW +I G + + A+S+F +M E + T+
Sbjct: 259 HMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTF 318
Query: 242 NSII---SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTT 297
+++ S L G K H + Y + N +V Y + G++ + F+ +
Sbjct: 319 GAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILG 378
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
+D+ WN M+FGLG + + L+ + +M SG PD TF +L CS ++ G+ +
Sbjct: 379 KDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQAL 438
Query: 358 HAQAIKI-ARNQFTTVSNAMITMYARCGNIQSA 389
+ + +Q T M+ + R G + A
Sbjct: 439 FESMVSVYGLSQETEHVVCMVDLLGRGGYLAQA 471
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 145/343 (42%), Gaps = 63/343 (18%)
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
+S++ T+ IV ++G + SA ++F+ M +D WN M+ + L ++ L F
Sbjct: 2 HSHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHH 61
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ + PD TFT+ L+ C+ L L G +IHAQ + V N++I MY +C +
Sbjct: 62 MRIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLS 121
Query: 386 IQSA------------------LLEFSSVPIHDI-------------ISWNSIICGLAYH 414
SA L ++S + D+ I+WN +I G
Sbjct: 122 ATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQC 181
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
G E L LF++MR +PD TF +++A L + + M + + ++
Sbjct: 182 GDVELCLGLFKKMREDSLQPDQWTFSALVNA-----LCELQEPSYGYMMHGFIIKSG--- 233
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI-AGERV 533
D+ M + I GI ++ W A++ A ++K+G+ V
Sbjct: 234 -------------WDDVMKVFESI---GI-LTQVSWNAMIDA-----HMKIGDTHEAFLV 271
Query: 534 MELEPNNSGV-YLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
+L P + V + + Y G E A F +M EN ++ +
Sbjct: 272 FQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPD 314
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 146/367 (39%), Gaps = 88/367 (23%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM---------------- 52
A+ +FD MP++ + WN+MI GY + G ++ + LF +M E +
Sbjct: 156 ARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCE 215
Query: 53 ----------------------------------FTYNTVIAGLMQSDNVQGAKEVFDGM 78
++N +I M+ + A VF
Sbjct: 216 LQEPSYGYMMHGFIIKSGWDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLA 275
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFK 138
++VV+W SMI+GY NG ++AL F M + + GA+++ A S
Sbjct: 276 PEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLH------ACSSLA 329
Query: 139 EMGARDVASWTI--------------MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
+G + +I +VN + G I + F ++ KD+ +WN M+
Sbjct: 330 TLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLF 389
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV----NSRRIDAAISYFKQMPET---C 237
G +G A +L+++M + K GL+ +S I+ + F+ M
Sbjct: 390 GLGMHGHATQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLS 449
Query: 238 EKTWNSI--ISVLIRNGLVKEAHSYLEKYPYSNIA--SWTNVIVGY-FEMGEV------G 286
++T + + + +L R G + +A +++Y + A S ++G F EV G
Sbjct: 450 QETEHVVCMVDLLGRGGYLAQARELVDEYSRTGRAETSLPEALLGACFAHSEVRMGANLG 509
Query: 287 SAIKVFE 293
+KVFE
Sbjct: 510 EYLKVFE 516
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 54/221 (24%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
M+ EA +F P+++ V+W MI GY +NG + A+ F +M E D FT+
Sbjct: 260 MKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFG 319
Query: 57 TVIA-------------------------------GLM----QSDNVQGAKEVFDGMEVR 81
V+ GL+ + ++QG+ F + +
Sbjct: 320 AVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGK 379
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAE--- 134
D+V+WN+M+ G +G +AL ++ M D V++ IG L+ C L E
Sbjct: 380 DLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTF---IGLLMTCSHSGLIEKGQ 436
Query: 135 SYFKEMG-----ARDVASWTIMVNGLVREGRIVEARKLFDK 170
+ F+ M +++ MV+ L R G + +AR+L D+
Sbjct: 437 ALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDE 477
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 207/658 (31%), Positives = 340/658 (51%), Gaps = 51/658 (7%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
+ E + + D V N MI Y + G L A LF++MPER+ +++ +I+GLM+
Sbjct: 71 KFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMK 130
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNL 119
V+ + F+ ++VV+W + ISG+V NGL EAL++F G+ DV ++
Sbjct: 131 YGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSV 190
Query: 120 V---------------IGALVNCQ-------------------RMDLAESYFKEMGARDV 145
V +G +V +DLA F M RDV
Sbjct: 191 VRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDV 250
Query: 146 ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
SWT +++ V G + EAR++FD+MP ++ +W+ MIA Y +G A LF KM
Sbjct: 251 VSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQE 310
Query: 206 ----DLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEK---TWNSIISVLIRNGLVKEA 257
+++ + ++ L + R + A I+ + + +K +S+I + + G +
Sbjct: 311 GFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDG 370
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ N+ W +++ GY G + ++FEL+ ++ W +I G EN+ E
Sbjct: 371 RLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCE 430
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
+ L+ F + SG +P+ +TF+SVL C+ + +LD G +H + IK+ V A+
Sbjct: 431 KVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALT 490
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDD 436
MYA+CG+I S+ F +P + ISW +I GLA G+A ++L LFE M R ++ P++
Sbjct: 491 DMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNE 550
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
+ + VL ACS+ GLVD+G +YF+ M+ Y ++P+ HYTCVVDLL R G + EA
Sbjct: 551 LMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEF-- 608
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
IR + W ALL C+ + + K+ E +++ +L NNS Y++L+ +Y S GR
Sbjct: 609 -IRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGR 667
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
D I M+E G+KK GCSW+++ + H F S D SH + + + L LL +E+
Sbjct: 668 WIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEM 725
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 185/434 (42%), Gaps = 71/434 (16%)
Query: 92 GYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIM 151
G + G + A + G + ++ L+I L NC++ + KE D+ M
Sbjct: 35 GLITQGNVLHAHLIKTGFSSQRYIAIKLLILYL-NCRKFAEIDQIVKEFDGSDLVVSNCM 93
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
++ V+ G +V+AR LFD+MP ++ +W+ +I+G + G V + F++ +++ SW
Sbjct: 94 ISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWT 153
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEK-------------------------------- 239
I+G V + A+ F ++ E+ +
Sbjct: 154 AAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKA 213
Query: 240 -------TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
NS+I++ +R G + A ++ ++ SWT ++ Y E G++ A ++F
Sbjct: 214 GFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIF 273
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ M R+ W+ MI ++ EE LK F +M + G P+ + F L+ + L L
Sbjct: 274 DEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALS 333
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
G IH KI ++ + +++I +Y +CG L F + +++ WNS++ G +
Sbjct: 334 AGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYS 393
Query: 413 YHG-------------------------------YAEKALELFERMRLTDFKPDDITFVG 441
+G EK LE+F + ++ P+ TF
Sbjct: 394 INGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSS 453
Query: 442 VLSACSYAGLVDQG 455
VL AC+ +D+G
Sbjct: 454 VLCACASIASLDKG 467
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 207/505 (40%), Gaps = 101/505 (20%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFT 54
M+ R++E+ F++ P ++ V+W I G+ +NG A+ LF ++ P FT
Sbjct: 129 MKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFT 188
Query: 55 ---------------------------------YNTVIAGLMQSDNVQGAKEVFDGMEVR 81
N++I ++ + A+ VFD ME R
Sbjct: 189 SVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKR 248
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
DVV+W +++ YV G + EA R+F MP ++ +SW+ +I + A F +M
Sbjct: 249 DVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMV 308
Query: 142 A---------------------------------------RDVASWTIMVNGLVREGRIV 162
+DV + +++ + G+
Sbjct: 309 QEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPD 368
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ R +FD + K+V WN M+ GY NG + E+LF+ + +++ SW +I G + + +
Sbjct: 369 DGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQ 428
Query: 223 IDAAISYFK------QMPETCEKTWNSIISVLIRNGLVKEA---HSYLEKYPYS-NIASW 272
+ + F Q P + T++S++ + + H + K +I
Sbjct: 429 CEKVLEVFNTLLVSGQTPN--KSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVG 486
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGP 331
T + Y + G++GS+ +VFE M ++ W VMI GL E+ E L F +M + S
Sbjct: 487 TALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEV 546
Query: 332 SPDNATFTSVLTICSDLPTLDLG-----RQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
+P+ SVL CS +D G IK +T V + + +R G +
Sbjct: 547 APNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCV----VDLLSRSGRL 602
Query: 387 QSALLEFSSVPIH-DIISWNSIICG 410
A ++P + +W +++ G
Sbjct: 603 YEAEEFIRTIPFQPEANAWAALLSG 627
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 202/663 (30%), Positives = 320/663 (48%), Gaps = 74/663 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ + + A +FD+MPQR+ +W VMI G ++G + F +M D F Y+
Sbjct: 167 KCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSA 226
Query: 58 VIAGLMQSDNVQGAKEV-----------------------------------FDGMEVRD 82
+I + D+++ K V F+ M +
Sbjct: 227 IIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHN 286
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMP-------LKDVVSWNLVIGALVNCQRMDLAES 135
V+WN+MISG NGL EA +F M + +VS + +G LV+ ++
Sbjct: 287 QVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQN 346
Query: 136 YFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDK--MPAKDVQAWNLMIAGYLDNGCV 192
E+G +V T +++ + G + +AR +FD + WN MI+GY +GC
Sbjct: 347 CASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCS 406
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A +L+ +M +TS + N+ ++ + + + K ++ V + N
Sbjct: 407 QEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNA 466
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+ Y + G + KVF+ M RD+ W ++ +
Sbjct: 467 IAD----------------------AYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQ 504
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
+ LGEE L F M+E G +P+ TF+SVL C+ L L+ GRQ+H K + +
Sbjct: 505 SSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCI 564
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+A+I MYA+CG+I A F + DI+SW +II G A HG E AL+LF RM L+
Sbjct: 565 ESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGI 624
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
K + +T + VL ACS+ G+V++G +YF M++ Y + P HY C++DLLGR G +D+AM
Sbjct: 625 KANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAM 684
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
IR +E + VW LLG CR+H N+++GEIA +++ + P S Y++L+ Y+
Sbjct: 685 EF---IRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYI 741
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
G ED + MK+ GVKKEPG SWI + H F SGD HP+ + L L
Sbjct: 742 ETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELRE 801
Query: 613 EIE 615
+I+
Sbjct: 802 KIK 804
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 135/584 (23%), Positives = 244/584 (41%), Gaps = 66/584 (11%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERD-MFTYNTVIAGLMQSD 66
+ Q+L D + RD +G + + + L + ++D M +N +
Sbjct: 117 QVQDLIDVL--RDCAE-----KGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCS 169
Query: 67 NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIG 122
+ A VFD M R+V +W MI G +GL + + F M L D +++ +I
Sbjct: 170 EFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQ 229
Query: 123 ALVNCQRMDLAESYFKEMGARDVASW----TIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+ + ++L + ++ R A+ T ++N + G I ++ +F+ M + +
Sbjct: 230 SCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVS 289
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
WN MI+G NG A DLF +M NG C
Sbjct: 290 WNAMISGCTSNGLHLEAFDLFVRMK-----------NG-------------------ACT 319
Query: 239 KTWNSIISV------LIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKV 291
+++SV L+ + KE + + N+ T +I Y + G + A V
Sbjct: 320 PNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSV 379
Query: 292 FE--LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
F+ + T WN MI G ++ +E L+ +VQM ++G + D T+ SV +
Sbjct: 380 FDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASK 439
Query: 350 TLDLGRQIHAQAIKIARN-QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
+L GR +H +K + +V+NA+ Y++CG ++ F + DI+SW +++
Sbjct: 440 SLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLV 499
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
+ E+AL F MR F P+ TF VL +C+ ++ GR + K L
Sbjct: 500 TAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLL-CKAGL 558
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
+ ++D+ + G I EA + ++I I W A++ H ++ +
Sbjct: 559 DTEKCIESALIDMYAKCGSITEAGKVFDKISNPDI----VSWTAIISGYAQHGLVE-DAL 613
Query: 529 AGERVMELEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKE 569
R MEL + +L ++ +C G E+ F QM++
Sbjct: 614 QLFRRMELSGIKANAVTLLCVLF-ACSHGGMVEEGLFYFQQMED 656
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 151/334 (45%), Gaps = 46/334 (13%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + E +A VF+ M R+V W VMI G E+ L +G KFF +M SG PD +
Sbjct: 165 YSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAY 224
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
++++ C L +L+LG+ +HAQ + VS +++ MYA+ G+I+ + F+ +
Sbjct: 225 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 284
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
H+ +SWN++I G +G +A +LF RM+ P+ T V V A V+ G+
Sbjct: 285 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 344
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLI------------------------------ 488
+C ++ ++ T ++D+ + G +
Sbjct: 345 QNC-ASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQS 403
Query: 489 ---DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI-------AGERVMELEP 538
EA+ L ++ +GI + ++ A +++ G + G +M +
Sbjct: 404 GCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSV 463
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
NN+ + + Y CG ED +++F +M+E +
Sbjct: 464 NNA-----IADAYSKCGFLEDVRKVFDRMEERDI 492
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/639 (30%), Positives = 337/639 (52%), Gaps = 41/639 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGLMQ 64
A+ +F M D VT+N +I G+ + G + A+ +F++M D T +++A
Sbjct: 198 AERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACAS 257
Query: 65 SDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
++Q K++ GM D +T S++ YV G I+ A +F+ +VV WNL
Sbjct: 258 VGDLQKGKQLHSYLLKAGMSF-DYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNL 316
Query: 120 VIGALVNCQRMDLAESY--FKEMGARDVAS---------WTIMVNGLVREGRIVEARKLF 168
++ A Q DLA+S+ F +M A + T G + G + + +
Sbjct: 317 MLVAYG--QISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIK 374
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+ + D+ ++I Y C+ A + + + RD+ SW +I G V + A++
Sbjct: 375 NGFES-DMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALA 433
Query: 229 YFKQMPETCEKTWNSIISVL-----------IRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
FK+M + W I + +R GL A Y+ Y ++I+ W ++
Sbjct: 434 TFKEMQDC--GVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYA-ADISIWNTLVN 490
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y G A +F + +D WN +I G G++ L E+ L F++M ++G + T
Sbjct: 491 LYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFT 550
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F S ++ ++L + G+Q+H +A+K T V+NA+I++Y +CG+I+ A + FS +
Sbjct: 551 FISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMS 610
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ + +SWN+II + HG +AL+LF++M+ KP+D+TF+GVL+ACS+ GLV++G
Sbjct: 611 LRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLS 670
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
YF M N Y L P HY CVVD+LGR G +D A ++E+ I + +W LL AC
Sbjct: 671 YFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEM---PITANAMIWRTLLSAC 727
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
++H NI++GE+A + ++ELEP++S Y++L+ Y G+ + ++ MK+ G++KEPG
Sbjct: 728 KVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPG 787
Query: 578 CSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
SWI++ + H F GD HP ++ L+ L+ + +
Sbjct: 788 RSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSK 826
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/545 (23%), Positives = 239/545 (43%), Gaps = 33/545 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N + +A+ +F ++ RD V+W M+ GY + G A L++QM + V++
Sbjct: 90 KNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSS 149
Query: 62 LMQSDN-----VQG---AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
++ + QG +V+ + N++I+ Y+ G A RVF M D
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCD 209
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKLFD 169
V++N +I C + A F EM G R D + ++ G + + ++L
Sbjct: 210 RVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHS 269
Query: 170 KMPAKDVQAWNLMIAG-----YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
+ K +++ + G Y+ G + A D+F ++ W ++ +
Sbjct: 270 YL-LKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLA 328
Query: 225 AAISYFKQMPETC----EKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIV 277
+ F QM T + T+ I+ G L ++ HS K + + + V++
Sbjct: 329 KSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLI 388
Query: 278 G-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + + A K+ E++ RDV W MI G ++D EE L F +M++ G PDN
Sbjct: 389 DMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNI 448
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
S + C+ + + G QIHA+ ++ N ++ +YARCG + A F +
Sbjct: 449 GLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREI 508
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
D I+WN +I G E+AL +F +M K + TF+ +SA + + QG+
Sbjct: 509 DHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGK 568
Query: 457 -YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
+ +K + + A+ ++ L G+ G I++A + +E+ EVS W ++
Sbjct: 569 QVHGRAVKTGHTSETEVAN--ALISLYGKCGSIEDAKMIFSEMSLRN-EVS---WNTIIT 622
Query: 516 ACRIH 520
+C H
Sbjct: 623 SCSQH 627
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 137/545 (25%), Positives = 240/545 (44%), Gaps = 80/545 (14%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQR 129
A++VF + RD V+W +M+SGY GL EA R++ M V+ V+ ++++ C +
Sbjct: 97 ARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTK 156
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
L +GR++ A +++ + + N +IA YL
Sbjct: 157 -----------------------GKLFAQGRMIHA-QVYKQAFCSETFVGNALIALYLGF 192
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSII 245
G +AE +F M D ++ LI+G + A+ F +M + + T S++
Sbjct: 193 GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252
Query: 246 SVLIRNGLV---KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
+ G + K+ HSYL K S + + +++ Y + G++ +A +F L +V
Sbjct: 253 AACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVV 312
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
+WN+M+ G+ + + F QM+ +G P+ T+ +L C+ ++LG QIH+ +
Sbjct: 313 LWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLS 372
Query: 362 IKIARNQFTTVSNAMITMYA--RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
IK VS +I MY+ RC + +LE + D++SW S+I G H + E+
Sbjct: 373 IKNGFESDMYVSGVLIDMYSKYRCLDKARKILEM--LEKRDVVSWTSMIAGYVQHDFCEE 430
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH---YT 476
AL F+ M+ PD+I SAC+ + QG + + ++ +A +
Sbjct: 431 ALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ----IHARVYVSGYAADISIWN 486
Query: 477 CVVDLLGRFGLIDEAMNLLNEI-RADGIEVSPTVWGALLGACRIHN-------------- 521
+V+L R G +EA +L EI D I + + G G R++
Sbjct: 487 TLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISG--FGQSRLYEQALMVFMKMSQAGA 544
Query: 522 ------------------NIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
+IK G ++ G V + + V L +Y CG EDAK
Sbjct: 545 KYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKM 604
Query: 563 IFAQM 567
IF++M
Sbjct: 605 IFSEM 609
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 152/312 (48%), Gaps = 16/312 (5%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G V A +VF+ +++RD W M+ G + LG+E + + QM + P
Sbjct: 88 YAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVL 147
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+SVL+ C+ GR IHAQ K A T V NA+I +Y G+ + A F +
Sbjct: 148 SSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLF 207
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
D +++N++I G A G+ E AL++F+ M+L+ +PD +T +L+AC+ G + +G+
Sbjct: 208 CDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQL 267
Query: 459 FDCMKNKYFLQP-RSAHYTC---VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
+ Y L+ S Y ++DL + G I+ A ++ N G + +W +L
Sbjct: 268 -----HSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNL----GDRTNVVLWNLML 318
Query: 515 GA-CRIHNNIKVGEIAGE-RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
A +I + K EI G+ + + PN Y + G+ E ++I + +NG
Sbjct: 319 VAYGQISDLAKSFEIFGQMQATGIHPNKF-TYPCILRTCTCTGQIELGEQIHSLSIKNGF 377
Query: 573 KKEPGCSWIQIN 584
+ + S + I+
Sbjct: 378 ESDMYVSGVLID 389
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 148/327 (45%), Gaps = 15/327 (4%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-- 237
NL+I Y NG V A +F+++ RD SW +++G A + QM T
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVI 141
Query: 238 --EKTWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKV 291
+S++S + L + H+ + K + + N ++ Y G A +V
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F M D +N +I G + GE L+ F +M+ SG PD T S+L C+ + L
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
G+Q+H+ +K + +++ +Y +CG+I++A F+ +++ WN ++
Sbjct: 262 QKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAY 321
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD-CMKNKYFLQP 470
K+ E+F +M+ T P+ T+ +L C+ G ++ G +KN +
Sbjct: 322 GQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGF---- 377
Query: 471 RSAHYTC--VVDLLGRFGLIDEAMNLL 495
S Y ++D+ ++ +D+A +L
Sbjct: 378 ESDMYVSGVLIDMYSKYRCLDKARKIL 404
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 159/354 (44%), Gaps = 35/354 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ +A+ + + + +RD V+W MI GY ++ F + A+ F +M + ++ N +A +
Sbjct: 397 LDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLAS--AA 454
Query: 66 DNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
G K + G+++ D+ WN++++ Y G +EA +F + KD +
Sbjct: 455 SACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEI 514
Query: 116 SWNLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGL-----VREGRIVEARK 166
+WN +I + + A F +M GA+ +V ++ ++ L +++G+ V R
Sbjct: 515 TWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRA 574
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ + + N +I+ Y G + A+ +F +M R+ SW +I R A
Sbjct: 575 V-KTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEA 633
Query: 227 ISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEK----YPYSNIASWTNVIVG 278
+ F QM + K T+ +++ GLV+E SY + Y + I +V
Sbjct: 634 LDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVD 693
Query: 279 YF-EMGEVGSAIK-VFELMTTRDVTVWNVMIFGLGEN---DLGEEGLKFFVQMK 327
G++ A + V E+ T + +W ++ + ++GE K ++++
Sbjct: 694 ILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELE 747
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 93/242 (38%), Gaps = 35/242 (14%)
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+IHA ++ + N +I +YA+ G + A F + D +SW +++ G A G
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
++A L+ +M T P VLSAC+ L QGR + + F
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 476 TCVVDLL--GRFGLIDE----------------------------AMNLLNEIRADGIEV 505
+ L G F L + A+ + +E++ G+
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI---LTEMYLSCGRREDAKR 562
+LL AC +++ G+ + L+ S Y+ L ++Y+ CG E A
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYL--LKAGMSFDYITEGSLLDLYVKCGDIETAHD 301
Query: 563 IF 564
IF
Sbjct: 302 IF 303
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 202/661 (30%), Positives = 329/661 (49%), Gaps = 86/661 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER---------- 50
+++ R+ +A +LFD+MP+++ V W ++ GY +NG + A+ +F M E
Sbjct: 59 VKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACN 118
Query: 51 -----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
D + + +I + ++ AKEVFD M+
Sbjct: 119 AALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSP 178
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN--LVIGALVNCQRM---DLAESY 136
DVV + S+IS + NG + A M LK + N + L C R+ +
Sbjct: 179 DVVGYTSLISAFCRNGEFELAAEALIQM-LKQGLKPNEHTMTTILTACPRVLGQQIHGYL 237
Query: 137 FKEMGARD--VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
K++G R V S T +++ R G A+ +FD + K+V +W M+ Y+ +G +
Sbjct: 238 IKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEE 297
Query: 195 AEDLFQKMHDRDLTSWK---QLINGLVNSRRIDAAI--SYFKQMPETCEKTWNSIISVLI 249
A +F M + + ++ G S + + S K T + N+++S+
Sbjct: 298 ALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYG 357
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
R GLV+E + L K ++ SWT I F+
Sbjct: 358 RTGLVEELEAMLNKIENPDLVSWTTAISANFQ---------------------------- 389
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
N GE+ + QM G +P+ F+SVL+ C+D+ +LD G Q H A+K+ +
Sbjct: 390 ---NGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSE 446
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
NA+I MY++CG + SA L F + HD+ SWNS+I G A HG A KALE+F +MR
Sbjct: 447 ICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRS 506
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
KPDD TF+GVL C+++G+V++G +F M ++Y P +HY C++D+LGR G D
Sbjct: 507 NGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFD 566
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
EA+ ++N++ E +W LL +C++H N+ +G++A +R+MEL +S Y++++
Sbjct: 567 EALRMINDM---PFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSN 623
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNL 609
+Y G EDA+++ +M E GVKK+ GCSWI+IN+ H F S D SHP + +L
Sbjct: 624 IYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGE 683
Query: 610 L 610
L
Sbjct: 684 L 684
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 130/539 (24%), Positives = 227/539 (42%), Gaps = 57/539 (10%)
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFK 138
E DVV ++ V +G + +AL +F MP K+VV+W V+ R + A + F
Sbjct: 44 ESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFA 103
Query: 139 EMGARDVASWTIMVN---------GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
+M VA N G +R G V + + A D + +I Y
Sbjct: 104 DMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGF-AGDAWIGSCLIEMYSRC 162
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI----DAAISYFKQMPETCEKTWNSII 245
G + A+++F +M D+ + LI+ + +A I KQ + E T +I+
Sbjct: 163 GSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTIL 222
Query: 246 SVLIRNGLVKEAHSYLEK---YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
+ R L ++ H YL K ++ S T +I Y GE A VF+ + ++V
Sbjct: 223 TACPRV-LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVS 281
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
W M+ + EE L+ F M G P+ + VL C ++ LGRQ+H AI
Sbjct: 282 WCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAI 338
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
K VSNA+++MY R G ++ + + D++SW + I +G+ EKA+
Sbjct: 339 KHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIA 398
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
L +M F P+ F VLS+C+ +DQG F C+ K ++++
Sbjct: 399 LLCQMHSEGFTPNGYAFSSVLSSCADVASLDQG-MQFHCLALKLGCDSEICTGNALINMY 457
Query: 483 GRFGLI-------------------------------DEAMNLLNEIRADGIEVSPTVWG 511
+ G + ++A+ + +++R++GI+ + +
Sbjct: 458 SKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFL 517
Query: 512 ALLGACRIHNNIKVGEIAGERVME---LEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+L C ++ GE+ +++ P S Y + +M GR ++A R+ M
Sbjct: 518 GVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSH-YACMIDMLGRNGRFDEALRMINDM 575
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 202/663 (30%), Positives = 320/663 (48%), Gaps = 74/663 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ + + A +FD+MPQR+ +W VMI G ++G + F +M D F Y+
Sbjct: 113 KCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSA 172
Query: 58 VIAGLMQSDNVQGAKEV-----------------------------------FDGMEVRD 82
+I + D+++ K V F+ M +
Sbjct: 173 IIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHN 232
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMP-------LKDVVSWNLVIGALVNCQRMDLAES 135
V+WN+MISG NGL EA +F M + +VS + +G LV+ ++
Sbjct: 233 QVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQN 292
Query: 136 YFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDK--MPAKDVQAWNLMIAGYLDNGCV 192
E+G +V T +++ + G + +AR +FD + WN MI+GY +GC
Sbjct: 293 CASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCS 352
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A +L+ +M +TS + N+ ++ + + + K ++ V + N
Sbjct: 353 QEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNA 412
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+ Y + G + KVF+ M RD+ W ++ +
Sbjct: 413 IAD----------------------AYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQ 450
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
+ LGEE L F M+E G +P+ TF+SVL C+ L L+ GRQ+H K + +
Sbjct: 451 SSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCI 510
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+A+I MYA+CG+I A F + DI+SW +II G A HG E AL+LF RM L+
Sbjct: 511 ESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGI 570
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
K + +T + VL ACS+ G+V++G +YF M++ Y + P HY C++DLLGR G +D+AM
Sbjct: 571 KANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAM 630
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
IR +E + VW LLG CR+H N+++GEIA +++ + P S Y++L+ Y+
Sbjct: 631 EF---IRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYI 687
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
G ED + MK+ GVKKEPG SWI + H F SGD HP+ + L L
Sbjct: 688 ETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELRE 747
Query: 613 EIE 615
+I+
Sbjct: 748 KIK 750
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 130/563 (23%), Positives = 236/563 (41%), Gaps = 59/563 (10%)
Query: 29 RGYFKNGFLDNAMCLFNQMPERD-MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWN 87
+G + + + L + ++D M +N + + A VFD M R+V +W
Sbjct: 77 KGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWT 136
Query: 88 SMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
MI G +GL + + F M L D +++ +I + + ++L + ++ R
Sbjct: 137 VMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMR 196
Query: 144 DVASW----TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
A+ T ++N + G I ++ +F+ M + +WN MI+G NG A DLF
Sbjct: 197 GFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLF 256
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV------LIRNGL 253
+M NG C +++SV L+ +
Sbjct: 257 VRMK-----------NG-------------------ACTPNMYTLVSVSKAVGKLVDVNM 286
Query: 254 VKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFE--LMTTRDVTVWNVMIFGL 310
KE + + N+ T +I Y + G + A VF+ + T WN MI G
Sbjct: 287 GKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGY 346
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN-QF 369
++ +E L+ +VQM ++G + D T+ SV + +L GR +H +K +
Sbjct: 347 SQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMV 406
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
+V+NA+ Y++CG ++ F + DI+SW +++ + E+AL F MR
Sbjct: 407 VSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMRE 466
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
F P+ TF VL +C+ ++ GR + K L + ++D+ + G I
Sbjct: 467 EGFAPNQFTFSSVLISCASLCFLEYGRQVHGLL-CKAGLDTEKCIESALIDMYAKCGSIT 525
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
EA + ++I I W A++ H ++ + R MEL + +L
Sbjct: 526 EAGKVFDKISNPDI----VSWTAIISGYAQHGLVE-DALQLFRRMELSGIKANAVTLLCV 580
Query: 550 MYLSC---GRREDAKRIFAQMKE 569
++ +C G E+ F QM++
Sbjct: 581 LF-ACSHGGMVEEGLFYFQQMED 602
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 151/334 (45%), Gaps = 46/334 (13%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + E +A VF+ M R+V W VMI G E+ L +G KFF +M SG PD +
Sbjct: 111 YSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAY 170
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
++++ C L +L+LG+ +HAQ + VS +++ MYA+ G+I+ + F+ +
Sbjct: 171 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 230
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
H+ +SWN++I G +G +A +LF RM+ P+ T V V A V+ G+
Sbjct: 231 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 290
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLI------------------------------ 488
+C ++ ++ T ++D+ + G +
Sbjct: 291 QNC-ASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQS 349
Query: 489 ---DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI-------AGERVMELEP 538
EA+ L ++ +GI + ++ A +++ G + G +M +
Sbjct: 350 GCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSV 409
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
NN+ + + Y CG ED +++F +M+E +
Sbjct: 410 NNA-----IADAYSKCGFLEDVRKVFDRMEERDI 438
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 49/265 (18%), Positives = 100/265 (37%), Gaps = 49/265 (18%)
Query: 341 VLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
VL C++ ++ + +H +K + N +Y++C ++A F +P
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
++ SW +I G HG + F M + PD + ++ +C ++ G+
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKM- 188
Query: 459 FDCMKNKYFLQPRSAHY---TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
+ + ++ + H T ++++ + G I+++ + N + E + W A++
Sbjct: 189 ---VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMM----TEHNQVSWNAMIS 241
Query: 516 AC--------------RIHNN---------IKVGEIAGERV---MELEPNNSGVYL---- 545
C R+ N + V + G+ V M E N L
Sbjct: 242 GCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEG 301
Query: 546 ------ILTEMYLSCGRREDAKRIF 564
L +MY CG DA+ +F
Sbjct: 302 NVLVGTALIDMYSKCGSLHDARSVF 326
>gi|297839569|ref|XP_002887666.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333507|gb|EFH63925.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/626 (30%), Positives = 329/626 (52%), Gaps = 54/626 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R+ ++ A+NLFD+MP+R+ +WN MI GY +G ++ F+ MPERD +++N VI+G
Sbjct: 54 RSGKMGIARNLFDEMPERNYFSWNTMIEGYMNSGDKGTSLRFFDMMPERDGYSWNVVISG 113
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-DVVSWNLV 120
++ + A+ +FD M +DVVT NS++ GY+ NG +EALR+F + D ++ V
Sbjct: 114 FAKAGELSVARRLFDAMPEKDVVTLNSLLHGYILNGYSEEALRLFKELKFSADAITLTTV 173
Query: 121 IGA-------------------------------LVN----CQRMDLAESYFKEMGARDV 145
+ A LVN C + +A +++G D
Sbjct: 174 LKACAELEALKRGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIGEPDD 233
Query: 146 ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
S + +++G GR+ E+R+LFD+ + V WN MI+GY+ N A LF +M +
Sbjct: 234 HSLSTLISGYANCGRVNESRRLFDRKSNRCVILWNSMISGYIANNMKFEALVLFNEMRNE 293
Query: 206 ---DLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCE-------KTWNSIISVLIRNGLV 254
D + +IN + ++ KQM C+ ++++ + + G
Sbjct: 294 TWEDSRTLAAVINACIGLGFLETG----KQMHCHACKFGLVDDIVVASTLLDMYSKCGSP 349
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
EA + + ++I YF G + A +VFE + + + WN M G +N
Sbjct: 350 MEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNG 409
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
E L++F QM + D + +SV++ C+ + +L LG Q+ A+A + + VS+
Sbjct: 410 CPVETLEYFSQMHKLDLPTDEVSLSSVISACASISSLGLGEQVFARATIVGLDSDQIVSS 469
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
++I +Y +CG++++ F ++ D + WNS+I G A +G+ +A++LF++M + +P
Sbjct: 470 SLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMISGYATNGHGFEAIDLFKKMSIAGIRP 529
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
ITF+ VL+AC+Y GLV++GR F+ MK + P H++C+VDLL R G ++EA++L
Sbjct: 530 TQITFMVVLTACNYCGLVEEGRLLFEAMKLDHGFVPDKEHFSCMVDLLARAGYVEEAIDL 589
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
+ E+ D ++W ++L C + +G+ E+++ELEP NS Y+ L+ ++ +
Sbjct: 590 VEEMPFDA---DASMWSSVLRGCVANGYKAMGKKVAEKIIELEPENSVAYVQLSAIFATS 646
Query: 555 GRREDAKRIFAQMKENGVKKEPGCSW 580
G E + + M+EN V K PG SW
Sbjct: 647 GDWESSALVRKLMRENNVSKNPGSSW 672
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 223/524 (42%), Gaps = 45/524 (8%)
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
V+ N ++ Y +G + A +F MP ++ SWN +I +N + +F M
Sbjct: 42 VIVANHLLQIYSRSGKMGIARNLFDEMPERNYFSWNTMIEGYMNSGDKGTSLRFFDMMPE 101
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
RD SW ++++G + G + AR+LFD MP KDV N ++ GY+ NG A LF+++
Sbjct: 102 RDGYSWNVVISGFAKAGELSVARRLFDAMPEKDVVTLNSLLHGYILNGYSEEALRLFKEL 161
Query: 203 H-DRDLTSWKQLINGLVNSRRIDAAISYFKQM----PETCEKTWNSIISVLIRNGLVKEA 257
D + ++ + Q+ E K +S+++V + G ++ A
Sbjct: 162 KFSADAITLTTVLKACAELEALKRGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMA 221
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
LE+ + S + +I GY G V + ++F+ + R V +WN MI G N++
Sbjct: 222 SYMLEQIGEPDDHSLSTLISGYANCGRVNESRRLFDRKSNRCVILWNSMISGYIANNMKF 281
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E L F +M+ D+ T +V+ C L L+ G+Q+H A K V++ ++
Sbjct: 282 EALVLFNEMRNE-TWEDSRTLAAVINACIGLGFLETGKQMHCHACKFGLVDDIVVASTLL 340
Query: 378 TMYARCGNIQSALLEFSSVPIHD-------------------------------IISWNS 406
MY++CG+ A FS V +D +ISWNS
Sbjct: 341 DMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNS 400
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
+ G + +G + LE F +M D D+++ V+SAC+ + G F
Sbjct: 401 MTNGFSQNGCPVETLEYFSQMHKLDLPTDEVSLSSVISACASISSLGLGEQVF-ARATIV 459
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG--ACRIHNNIK 524
L + ++DL + G ++ + + + ++ W +++ A H
Sbjct: 460 GLDSDQIVSSSLIDLYCKCGSVENGRRVFDTM----VKSDEVPWNSMISGYATNGHGFEA 515
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+ + + P ++LT CG E+ + +F MK
Sbjct: 516 IDLFKKMSIAGIRPTQITFMVVLTACNY-CGLVEEGRLLFEAMK 558
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/530 (33%), Positives = 284/530 (53%), Gaps = 32/530 (6%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA 146
N+++ Y N L EA+ VF MP +D +++ +I AL + VA
Sbjct: 93 NTLLRAYALNALPREAVAVFSAMPHRDSFTYSFLIKAL----------------SSAGVA 136
Query: 147 SWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRD 206
+ + +V+ G I +D N +I Y NG A +F++M RD
Sbjct: 137 PLRAVHSHVVKLGSI------------EDTYVGNALIDAYSKNGGFSDASKVFEEMPRRD 184
Query: 207 LTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
+ SW + +V ++ A F +M E +WN+++ + G V+EA + P
Sbjct: 185 VVSWNSAMAAMVRQGEVEGARRMFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPE 244
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
N+ SW+ V+ GY + G++ A +F+ M T+++ W +M+ +N L EE K F QM
Sbjct: 245 RNVVSWSTVVSGYCKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQM 304
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
KE+ D A S+L C++ +L LG++IH + T V NA+I M+ +CG I
Sbjct: 305 KEASVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCI 364
Query: 387 QSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
A F + + D +SWN+II G A HG+ +KAL+ F +M+L F PD +T + VLSA
Sbjct: 365 NRADYVFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSA 424
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
C++ G V++GR YF M+ Y + P+ HY C++DLLGR GLI EA++L+ + D EV
Sbjct: 425 CTHMGFVEEGRRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEV 484
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
+WG+LL ACR+H N++ EIA + +L+P+N+G Y +L+ +Y G+ D +
Sbjct: 485 ---IWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARM 541
Query: 566 QMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
QMK G +K G SWI++++ H F GD HP ++ +++ L + +
Sbjct: 542 QMKGTGSQKSSGSSWIELDEAFHEFTVGDRKHPDSDQISEMVDRLSSHAK 591
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 218/466 (46%), Gaps = 36/466 (7%)
Query: 5 RIQEAQNLFDKMPQRDTVTW--NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
R+ ++ +F P T+ N ++R Y N A+ +F+ MP RD FTY+ +I L
Sbjct: 71 RLPASRGVFASFPNPHATTFLPNTLLRAYALNALPREAVAVFSAMPHRDSFTYSFLIKAL 130
Query: 63 MQSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
S V + V + + D N++I Y NG +A +VF MP +DVVSWN
Sbjct: 131 -SSAGVAPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWN 189
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+ A+V ++ A F EM +D SW +++G + G + EA KLF MP ++V +
Sbjct: 190 SAMAAMVRQGEVEGARRMFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVS 249
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE-TC 237
W+ +++GY G + +A +F KM ++L +W +++ + ++ A F QM E +
Sbjct: 250 WSTVVSGYCKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASV 309
Query: 238 EKTWNSIISVLIRN------GLVKEAHSYLEKYPYSNIASWTNVIVGYF-EMGEVGSAIK 290
E +++S+L L K H Y+ N ++ F + G + A
Sbjct: 310 ELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADY 369
Query: 291 VFEL-MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
VF+ + +D WN +I G + G++ L FF QMK G PD T +VL+ C+ +
Sbjct: 370 VFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMG 429
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLEFSSVP--IHDII 402
++ GR+ A + V MI + R G I+ A+ S+P +++I
Sbjct: 430 FVEEGRRYFAN----MERDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEVI 485
Query: 403 SWNSIICGLAYHG---YAEKALELFERMRLTDFKPDDITFVGVLSA 445
W S++ H YAE A+ L+ +P + VLS+
Sbjct: 486 -WGSLLSACRLHKNVEYAEIAVN-----ELSKLQPSNAGNYAVLSS 525
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 148/286 (51%), Gaps = 22/286 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R ++ A+ +FD+M ++DTV+WN ++ GY K G ++ A LF MPER++ +++TV++
Sbjct: 196 VRQGEVEGARRMFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWSTVVS 255
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVS 116
G + +++ A+ +FD M +++VTW M+S NGL++EA ++F M DV +
Sbjct: 256 GYCKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVAA 315
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFD-KM 171
++ A + L + + + R + T + N L+ + G I A +FD ++
Sbjct: 316 VVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADYVFDTEI 375
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAI 227
KD +WN +I G+ +G A D F +M + D + +++ + ++
Sbjct: 376 VEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFVEEGR 435
Query: 228 SYFKQM-------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
YF M P+ + + +I +L R GL+KEA ++ P+
Sbjct: 436 RYFANMERDYGVVPQI--EHYGCMIDLLGRGGLIKEAVDLIKSMPW 479
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 138/275 (50%), Gaps = 17/275 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N +A +F++MP+RD V+WN + + G ++ A +F++M E+D ++NT++ G
Sbjct: 166 KNGGFSDASKVFEEMPRRDVVSWNSAMAAMVRQGEVEGARRMFDEMLEKDTVSWNTLLDG 225
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
++ +V+ A ++F M R+VV+W++++SGY G ++ A +F MP K++V+W +++
Sbjct: 226 YTKAGDVEEAFKLFQCMPERNVVSWSTVVSGYCKKGDMEMARVIFDKMPTKNLVTWTIMV 285
Query: 122 GALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLF----DKMPA 173
A ++ A F +M DVA+ ++ G + +++ +
Sbjct: 286 SACAQNGLVEEAGKLFTQMKEASVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLG 345
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQ-KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+ N +I + GC+ A+ +F ++ ++D SW +I G D A+ +F Q
Sbjct: 346 RSTHVCNALIDMFCKCGCINRADYVFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQ 405
Query: 233 M------PETCEKTWNSIISVLIRNGLVKEAHSYL 261
M P+ T +++S G V+E Y
Sbjct: 406 MKLQGFCPDAV--TMINVLSACTHMGFVEEGRRYF 438
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/624 (29%), Positives = 322/624 (51%), Gaps = 32/624 (5%)
Query: 22 VTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
V ++ Y G L ++ F+ +P RD +N +I+ ++ A VF +
Sbjct: 90 VAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLL 149
Query: 80 VRDV------VTWNSMIS--GYVCNGLIDEALRVF---HGMPLKDVVS-WNLVIGALVNC 127
D ++ S++S G + + + ++ H + V+S N +I + C
Sbjct: 150 ASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKC 209
Query: 128 QRMDL---AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
+ A EM +D +WT +V G VR+G + AR F+++ + WN MI+
Sbjct: 210 DAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMIS 269
Query: 185 GYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQ-------- 232
GY+ +G A +LF++M + D ++ L++ N+ S Q
Sbjct: 270 GYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDF 329
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
+PE N+++++ ++G + A + ++ SW ++ GY E G + +A ++F
Sbjct: 330 VPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIF 389
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ M + W VM+ G L E+ LK F QM+ P + T+ + C +L L
Sbjct: 390 KEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALK 449
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
G+Q+HA ++ + NA++TMYARCG ++ A L F +P D +SWN++I L
Sbjct: 450 HGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALG 509
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
HG+ +ALELF++M PD I+F+ +L+AC++AGLVD G YF+ M+ + + P
Sbjct: 510 QHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGE 569
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
HY ++DLLGR G I EA +L I+ E +P +W A+L CRI+ ++++G A ++
Sbjct: 570 DHYARLIDLLGRAGRIGEARDL---IKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQ 626
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLS 592
+ ++ P + G Y++L+ Y + GR DA R+ M++ GVKKEPGCSWI++ + HVFL
Sbjct: 627 LFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLV 686
Query: 593 GDSSHPKFHRLRYLLNLLHTEIER 616
GD+ HP H + L ++ ++ +
Sbjct: 687 GDTKHPDAHEVYRFLEMVGAKMRK 710
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 137/559 (24%), Positives = 227/559 (40%), Gaps = 113/559 (20%)
Query: 5 RIQEAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQM--------PERDMFT 54
R++++ FD +P +RDTV N MI + + A+ +F + P+ FT
Sbjct: 104 RLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFT 163
Query: 55 -----------------------------------YNTVIAGLMQSDN---VQGAKEVFD 76
N +IA M+ D + A++V D
Sbjct: 164 SLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLD 223
Query: 77 GMEVRDVVT-------------------------------WNSMISGYVCNGLIDEALRV 105
M +D +T WN+MISGYV +G+ EA +
Sbjct: 224 EMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFEL 283
Query: 106 FHGMPLK----DVVSWNLVIGALVNCQRMDLAESY---FKEMGARDVASWTIMVNGLV-- 156
F M K D ++ ++ A N +S F + V + VN +
Sbjct: 284 FRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVT 343
Query: 157 ---REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL 213
+ G+I A K+FD M KDV +WN +++GY+++GC+ A +F++M + SW +
Sbjct: 344 LYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVM 403
Query: 214 INGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIRNGLVKEA---HSYLEKYPY 266
++G V+ + A+ F QM + C+ T+ ++ G +K H++L + +
Sbjct: 404 VSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGF 463
Query: 267 SNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
S N ++ Y G V A VF +M D WN MI LG++ G E L+ F Q
Sbjct: 464 EASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQ 523
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ-----AIKIARNQFTTVSNAMITMY 380
M G PD +F ++LT C+ +D G Q I + + +I +
Sbjct: 524 MVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYAR----LIDLL 579
Query: 381 ARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELFERMRLTDFKPD-DIT 438
R G I A ++P + W +I+ G +G E L + +L P+ D T
Sbjct: 580 GRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDME--LGAYAADQLFKMVPEHDGT 637
Query: 439 FVGVLSACSYAGL-VDQGR 456
++ + + S AG VD R
Sbjct: 638 YILLSNTYSAAGRWVDAAR 656
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 160/398 (40%), Gaps = 98/398 (24%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+R + A++ F+++ V WN MI GY ++G A LF +M + D FT+
Sbjct: 241 VRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFT 300
Query: 57 TVIAG------LMQSDNVQG---------------------------------AKEVFDG 77
++++ + +V G A ++FD
Sbjct: 301 SLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDS 360
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF 137
M ++DVV+WN+++SGY+ +G +D A R+F MP K +SW +++ V+ + A F
Sbjct: 361 MTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLF 420
Query: 138 KEMGARDVASWTIMVNGLV---------------------------------------RE 158
+M + DV G V R
Sbjct: 421 NQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARC 480
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLI 214
G + +AR +F MP D +WN MI+ +G A +LF +M + D S+ ++
Sbjct: 481 GAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTIL 540
Query: 215 NGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SN 268
++ +D YF+ M E + +I +L R G + EA ++ P+
Sbjct: 541 TACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPT 600
Query: 269 IASWTNVIVGY-----FEMGEVGSAIKVFELMTTRDVT 301
A W ++ G E+G +A ++F+++ D T
Sbjct: 601 PAIWEAILSGCRINGDMELGAY-AADQLFKMVPEHDGT 637
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 206/643 (32%), Positives = 328/643 (51%), Gaps = 36/643 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTY 55
M+ +I EA+++F+KM RD ++W +I GY + A+ LF+ M ++D F
Sbjct: 95 MKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVV 154
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRD-----VVTWNSMISGYVCNGLIDEALRVFHGMP 110
+ + NV E+ G V+ V ++++ Y+ G ++ VF M
Sbjct: 155 SVALKACALGMNVYFG-ELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMT 213
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA--SWTIMV-------NGLVREGRI 161
++VVSW VI LV+ SYF EM V S T V +GL+ G+
Sbjct: 214 TRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKA 273
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGC--VGVAEDLFQKMHDRDLTSWKQLINGLVN 219
+ A+ + + A+ + G + + C LF KM D+ SW LI V
Sbjct: 274 IHAQTIKQGF---NETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQ 330
Query: 220 SRRIDAAISYFKQMPET----CEKTWNSIISVLIRNGLVK---EAHSYLEKYPYSNIASW 272
+ A+ FK+M ++ E T+ S+IS + K + H + + + S
Sbjct: 331 MGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSV 390
Query: 273 TNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
+N I+ Y + G + A VF+ MT +D+ W+ +I + +E + M GP
Sbjct: 391 SNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGP 450
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
P+ SVL++C + L+ G+Q+HA A+ I + T V +A+I+MY+R GN+Q A
Sbjct: 451 KPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASK 510
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F S+ +DI+SW ++I G A HGY+++A+ LFE + PD +TF+G+L+AC++AGL
Sbjct: 511 IFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGL 570
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
VD G YY+ M N+Y + P HY C++DLL R G + EA ++ +R VW
Sbjct: 571 VDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHM---VRNMPFPCDDVVWS 627
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
LL ACR H ++ A E+++ L PN++G ++ L +Y + GRRE+A + MK G
Sbjct: 628 TLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKG 687
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
V KEPG SWI ND + F++G SHP ++ +L LL T I
Sbjct: 688 VIKEPGWSWINSNDQLNTFVAGVQSHPLSKQITTILELLRTSI 730
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 198/469 (42%), Gaps = 70/469 (14%)
Query: 155 LVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH-DRDLTSWKQL 213
L++ G+I EAR +F+KM +D +W +IAGY++ A LF M D L + +
Sbjct: 94 LMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFV 153
Query: 214 INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWT 273
++ + + + + YF ++ I SV + + LV
Sbjct: 154 VSVALKACALGMNV-YFGELLHGFSVKSGLINSVFVSSALVDM----------------- 195
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
Y ++G+ VFE MTTR+V W +I GL +GL +F +M S
Sbjct: 196 -----YMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGY 250
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D+ TF L ++ L G+ IHAQ IK N+ V N + TMY++C + F
Sbjct: 251 DSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLF 310
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC------- 446
+ D++SW ++I G E+AL+ F+RMR +D P++ TF V+SAC
Sbjct: 311 GKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITK 370
Query: 447 ----------------------------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
S GL+ + FD M K + ++ +
Sbjct: 371 WGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIIS-----WSTI 425
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
+ + + EA N L+ + +G + + ++L C ++ G+ + +
Sbjct: 426 ISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGL 485
Query: 539 NN-SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
++ + V+ L MY G ++A +IF +K N + SW + +G
Sbjct: 486 DHETMVHSALISMYSRSGNLQEASKIFDSIKNNDI-----VSWTAMING 529
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 208/639 (32%), Positives = 319/639 (49%), Gaps = 45/639 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
++ R+ A+ F+++ +D WN+M+ GY G A+ + M + D T+N
Sbjct: 236 IKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWN 295
Query: 57 TVIAGLMQSDNVQGAKEVFDGME-VRD----VVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+I+G QS + A + F M ++D VV+W ++I+G NG EAL VF M L
Sbjct: 296 AIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVL 355
Query: 112 KDVVSWNLVIGALVN-CQRMDLAESYFKEMGARDVASWTIMV----------NGLV---R 157
+ V ++ I + V+ C + L R++ + I V N LV
Sbjct: 356 EGVKPNSITIASAVSACTNLSLLRH------GREIHGYCIKVEELDSDLLVGNSLVDYYA 409
Query: 158 EGRIVE-ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQ 212
+ R VE AR+ F + D+ +WN M+AGY G A +L +M + D+ +W
Sbjct: 410 KCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNG 469
Query: 213 LINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVLIRN-GLVKEAHSY-LEKY 264
L+ G AA+ +F++M P T + +RN L KE H Y L +
Sbjct: 470 LVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNH 529
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
+ + +I Y + A VF ++TRDV VWN +I ++ L
Sbjct: 530 IELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLR 589
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
+M S + T S L CS L L G++IH I+ + + N++I MY RCG
Sbjct: 590 EMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCG 649
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+IQ + F +P D++SWN +I HG+ A+ LF+ R KP+ ITF +LS
Sbjct: 650 SIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLS 709
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
ACS++GL+++G YF MK +Y + P Y C+VDLL R G +E + + ++ E
Sbjct: 710 ACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMP---FE 766
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ VWG+LLGACRIH N + E A + ELEP +SG Y+++ +Y + GR EDA +I
Sbjct: 767 PNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIR 826
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL 603
MKE GV K PGCSWI++ H F+ GD+SHP ++
Sbjct: 827 CLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQI 865
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 150/626 (23%), Positives = 257/626 (41%), Gaps = 100/626 (15%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF----NQMPERDMFTYNTVIAG 61
+++A+ +FDKM +R+ +W ++ Y G + + LF N+ D F + V
Sbjct: 140 VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKA 199
Query: 62 LMQSDNVQGAKEVFDGM-----------------------------------EVRDVVTW 86
+ N + K+V+D M E +DV W
Sbjct: 200 CSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMW 259
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
N M+SGY G +AL+ M L D V+WN +I + + A YF EMG
Sbjct: 260 NIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGG 319
Query: 143 -----RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+V SWT ++ G + G EA +F KM + V+ ++ IA V +
Sbjct: 320 LKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIA-----SAVSACTN 374
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
L H R++ + + +D+ + NS++ + V+ A
Sbjct: 375 LSLLRHGREIHGY------CIKVEELDSDL-----------LVGNSLVDYYAKCRSVEVA 417
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR----DVTVWNVMIFGLGEN 313
+++ SW ++ GY G AI++ M + D+ WN ++ G +
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQY 477
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
G+ L+FF +M G P+ T + L C + L LG++IH ++ T V
Sbjct: 478 GDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVG 537
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
+A+I+MY+ C +++ A FS + D++ WNSII A G + AL+L M L++ +
Sbjct: 538 SALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVE 597
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC------VVDLLGRFGL 487
+ +T V L ACS + QG K + R TC ++D+ GR G
Sbjct: 598 VNTVTMVSALPACSKLAALRQG-------KEIHQFIIRCGLDTCNFILNSLIDMYGRCGS 650
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIH--NNIKVGEIAGERVMELEPNNSGVYL 545
I ++ + + + + W ++ +H V R M L+PN ++
Sbjct: 651 IQKSRRIFDLMPQRDL----VSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPN----HI 702
Query: 546 ILTEMYLSC---GRREDAKRIFAQMK 568
T + +C G E+ + F MK
Sbjct: 703 TFTNLLSACSHSGLIEEGWKYFKMMK 728
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 141/600 (23%), Positives = 251/600 (41%), Gaps = 110/600 (18%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAGLM 63
+ QNL R +T +NG L+NA L + M P+ + Y +++
Sbjct: 41 KTQNLRKLTNARQRITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCR 100
Query: 64 QSDNVQ-----GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
+ N++ A+ V +G++V + + + ++ Y G +++A R+F M ++V SW
Sbjct: 101 KLYNLRLGFQVHAQLVVNGVDVCEFLG-SRLLEVYCQTGCVEDARRMFDKMSERNVFSWT 159
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEAR------KLFDKMP 172
++ + C D E+ + + +MVN VR V + +L +
Sbjct: 160 AIME--MYCGLGDYEET---------IKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRV 208
Query: 173 AKDVQAWNLMIAGYLDNGCVG--------------VAEDLFQKMHDRDLTSWKQLINGLV 218
KDV + L I G+ N CV +A F+++ +D+ W +++G
Sbjct: 209 GKDVYDYMLSI-GFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYT 267
Query: 219 NSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTN 274
+ A+ M + K TWN+IIS ++G +EA Y
Sbjct: 268 SKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKY-------------- 313
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+ EMG +K F+ +V W +I G +N E L F +M G P+
Sbjct: 314 ----FLEMG----GLKDFK----PNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPN 361
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIAR-NQFTTVSNAMITMYARCGNIQSALLEF 393
+ T S ++ C++L L GR+IH IK+ + V N+++ YA+C +++ A +F
Sbjct: 362 SITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF 421
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ D++SWN+++ G A G E+A+EL M+ +PD IT+ G+++
Sbjct: 422 GMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTG-------- 473
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
F Q +G A+ + + G++ + T
Sbjct: 474 -------------FTQ---------------YGDGKAALEFFQRMHSMGMDPNTTTISGA 505
Query: 514 LGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
L AC N+K+G EI G + ++GV L MY C E A +F+++ V
Sbjct: 506 LAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDV 565
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 175/406 (43%), Gaps = 36/406 (8%)
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLI-----------NGLVNSRRI----------DAAISY 229
C VA + + R LT+ +Q I NG++N+ + D I
Sbjct: 32 CCIVASTNTKTQNLRKLTNARQRITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEI 91
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
+ + + C K +N + + LV E + ++ Y + G V A
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLG-------SRLLEVYCQTGCVEDAR 144
Query: 290 KVFELMTTRDVTVWNV---MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
++F+ M+ R+V W M GLG+ EE +K F M G PD+ F V CS
Sbjct: 145 RMFDKMSERNVFSWTAIMEMYCGLGDY---EETIKLFYLMVNEGVRPDHFVFPKVFKACS 201
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
+L +G+ ++ + I + V +++ M+ +CG + A F + D+ WN
Sbjct: 202 ELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNI 261
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
++ G G +KAL+ M+L+ KPD +T+ ++S + +G ++ YF M
Sbjct: 262 MVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLK 321
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
+P +T ++ + G EA+++ ++ +G++ + + + AC + ++ G
Sbjct: 322 DFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHG 381
Query: 527 EIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQMKEN 570
+++E +S + + L + Y C E A+R F +K+
Sbjct: 382 REIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQT 427
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/563 (33%), Positives = 313/563 (55%), Gaps = 43/563 (7%)
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D + A VF+ ++ +++ WN+M G+ + AL ++ M + +G L
Sbjct: 36 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCM---------ISLGLLP 86
Query: 126 NCQRMD-LAESYFKEMGAR----------------DVASWTIMVNGLVREGRIVEARKLF 168
NC L +S K R D+ T +++ V+ GR+ +ARK+F
Sbjct: 87 NCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVF 146
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
D+ +DV ++ +I GY G + A+ +F ++ +D+ SW +I+G + A+
Sbjct: 147 DQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALE 206
Query: 229 YFKQMPETC----EKTWNSIISVLIRNG---LVKEAHSYLEKYPY-SNIASWTNVIVGYF 280
FK+M +T E T S++S ++ L ++ HS+++ + + SN+ +I Y
Sbjct: 207 LFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYI 266
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ GEV +A +FE ++ +DV WN +I G +L +E L F +M SG SP++ T S
Sbjct: 267 KCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLS 326
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPI 398
+L C+ L +++GR IH K + S+ ++I MYA+CG+I++A F S+
Sbjct: 327 ILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILN 386
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
+ SWN++I G A HG A A ++F RMR + +PDDITFVG+LSACS++G++D GR+
Sbjct: 387 RSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI 446
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN--EIRADGIEVSPTVWGALLGA 516
F MK Y + P+ HY C++DLLG GL EA ++N E+ DG+ +W +LL A
Sbjct: 447 FRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV-----IWCSLLKA 501
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
C++H N+++GE + ++++EP N G Y++L+ +Y + GR + +I A + + G+KK P
Sbjct: 502 CKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVP 561
Query: 577 GCSWIQINDGGHVFLSGDSSHPK 599
GCS I+I+ H F+ GD HP+
Sbjct: 562 GCSSIEIDSVVHEFIIGDKFHPR 584
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 215/476 (45%), Gaps = 55/476 (11%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D++ + ++I+ +Q+ ++ A++VFD RDVV++ ++I+GY G I A ++F +P
Sbjct: 122 DLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIP 181
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNGLVREGRIVEARK 166
+KDVVSWN +I A FKEM +V ++ +V+ + I R+
Sbjct: 182 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ 241
Query: 167 LF----DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ D +++ N +I Y+ G V A LF+ + +D+ SW LI G +
Sbjct: 242 VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 301
Query: 223 IDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEA---HSYLEK--YPYSNIASW- 272
A+ F++M + E T SI+ G ++ H Y+ K +N +S
Sbjct: 302 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR 361
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T++I Y + G++ +A +VF+ + R ++ WN MIFG + F +M+++
Sbjct: 362 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 421
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD+ TF +L+ CS LDLGR I +S +
Sbjct: 422 PDDITFVGLLSACSHSGMLDLGRHI----------------------------FRSMKED 453
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
+ P + + +I L + G ++A E+ M + +PD + + +L AC G V
Sbjct: 454 YKITP--KLEHYGCMIDLLGHSGLFKEAEEMINTMEM---EPDGVIWCSLLKACKMHGNV 508
Query: 453 DQGRYYFDCMKNKYFLQPRS-AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
+ G Y +N ++P++ Y + ++ G +E + + G++ P
Sbjct: 509 ELGESY---AQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVP 561
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 150/346 (43%), Gaps = 89/346 (25%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N R+++A+ +FD+ RD V++ +I GY G++ +A +F+++P +D+ ++N +I+
Sbjct: 134 VQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMIS 193
Query: 61 GLMQSDNVQGAKEVFDGMEV--------------------------RDVVTW-------- 86
G ++ N + A E+F M R V +W
Sbjct: 194 GYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGS 253
Query: 87 -----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
N++I Y+ G ++ A +F G+ KDV+SWN +IG + A F+EM
Sbjct: 254 NLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEML 313
Query: 141 ---------------------GARDVASW-------------------TIMVNGLVREGR 160
GA ++ W T +++ + G
Sbjct: 314 RSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGD 373
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLING 216
I A+++FD + + + +WN MI G+ +G A D+F +M + D ++ L++
Sbjct: 374 IEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSA 433
Query: 217 LVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVKEA 257
+S +D F+ M E + T + +I +L +GL KEA
Sbjct: 434 CSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEA 479
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 13/175 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I+ AQ +FD + R +WN MI G+ +G + A +F++M + ++ + GL+ +
Sbjct: 374 IEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSA 433
Query: 66 DNVQG----AKEVFDGMEVRDVVT-----WNSMISGYVCNGLIDEALRVFHGMPLK-DVV 115
+ G + +F M+ +T + MI +GL EA + + M ++ D V
Sbjct: 434 CSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV 493
Query: 116 SWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGRIVEARKL 167
W ++ A ++L ESY + ++ ++ S+ ++ N GR E K+
Sbjct: 494 IWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKI 548
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 206/640 (32%), Positives = 331/640 (51%), Gaps = 31/640 (4%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNA--MCLFNQMPERDMFTYNTVIAGL 62
R++EA+ +F+++ +D V+WN +I GY ++G ++ M LF +M + AG+
Sbjct: 55 RLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGV 114
Query: 63 MQS-----DNVQG--AKEVFDGME-VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
+ D G A V M+ RDV +S+++ Y GL EA +VF MP ++
Sbjct: 115 FTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNS 174
Query: 115 VSWNLVIGALVNCQRMDLAESYFK-----EMGARDVASWTIM----VNGLVREGRIVEAR 165
VSW +I + + A F+ E G + +++ + LV G+ +
Sbjct: 175 VSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCI 234
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
+ + + + V N ++ Y G + A F+ D++ +W +I G S D
Sbjct: 235 AVKNGLLSI-VSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDK 293
Query: 226 AISYFKQMP----ETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPY-SNIASWTNVIV 277
A+ F M E T+ +I+ G K+ H YL K + S I T ++
Sbjct: 294 ALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVD 353
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + + A K F+ + D+ +W MI G +N E+ L + +M+ G P+ T
Sbjct: 354 MYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELT 413
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
SVL CS L L+ G+QIHA+ +K + +A+ TMYA+CG ++ L F +P
Sbjct: 414 MASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMP 473
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
D+ISWN++I GL+ +G ++ALELFE M+L KPD +TFV +LSACS+ GLV++G
Sbjct: 474 ARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWG 533
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
YF M +++ + PR HY C+VD+L R G + EA+ + I+ +W +LGAC
Sbjct: 534 YFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEF---TESATIDHGMCLWRIILGAC 590
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
R + N ++G AGE++MEL S Y++L+ +Y + GR ED +R+ MK GV KEPG
Sbjct: 591 RNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPG 650
Query: 578 CSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
CSWI++ G HVF+ D HP+ + L L +++ E
Sbjct: 651 CSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDE 690
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 235/531 (44%), Gaps = 68/531 (12%)
Query: 31 YFKNGFLDNAMCLFNQMPERD---MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWN 87
Y N L L Q+ + ++ N+++ + ++ AK VF+ ++ +DVV+WN
Sbjct: 16 YTHNRSLQKGKALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWN 75
Query: 88 SMISGYVCNGLIDEA--LRVFHGMPLKDVV----SWNLVIGA---LVNCQRMDLAESYFK 138
+I+GY +G + + +F M ++ ++ V A LV+ LA +
Sbjct: 76 CIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAI 135
Query: 139 EMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+M + RDV + ++N + G EARK+FD MP ++ +W MI+GY A
Sbjct: 136 KMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALG 195
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
LF+ M + + + ++++ + ++ KQ I + ++NGL+
Sbjct: 196 LFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQ-----------IHCIAVKNGLL--- 241
Query: 258 HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
+I S N +V Y + G + A++ FE + ++ W+ MI G ++
Sbjct: 242 ----------SIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDS 291
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
++ LK F M SG P TF V+ CSDL G+Q+H +K+ V A+
Sbjct: 292 DKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTAL 351
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+ MYA+C +I A F + DI+ W S+I G +G E AL L+ RM + P++
Sbjct: 352 VDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNE 411
Query: 437 ITFVGVLSACSYAGLVDQG--------RYYF-----------------DCMKNKYFLQPR 471
+T VL ACS ++QG +Y F C+K+ + R
Sbjct: 412 LTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRR 471
Query: 472 SA-----HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ ++ L + G EA+ L E++ +G + + +L AC
Sbjct: 472 MPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSAC 522
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 203/467 (43%), Gaps = 80/467 (17%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE--DLFQKMHDRDLT 208
+VN + R+ EA+ +F+++ KDV +WN +I GY +G G + +LFQ+M +
Sbjct: 46 LVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTA 105
Query: 209 SWKQLINGLVN--SRRIDAAISYFKQMP----ETCEKTW--NSIISVLIRNGLVKEAHSY 260
G+ S +DAA ++C + +S++++ + GL EA
Sbjct: 106 PNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKV 165
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+ P N SW +I GY A+ +F LM EEG
Sbjct: 166 FDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRRE------------------EEGE 207
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
FV FTSVL+ + ++ G+QIH A+K +V NA++TMY
Sbjct: 208 NEFV-------------FTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMY 254
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
A+CG++ AL F + + I+W+++I G A G ++KAL+LF M L+ +P + TFV
Sbjct: 255 AKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFV 314
Query: 441 GVLSACSYAGLVDQGRYYFDCMKN------------------------------KYFLQP 470
GV++ACS G +G+ D + Y +P
Sbjct: 315 GVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEP 374
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
+T ++ + G ++A++L + +GI + ++L AC ++ G+
Sbjct: 375 DIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIH 434
Query: 531 ERVME----LE-PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
R ++ LE P S L+ MY CG +D +F +M V
Sbjct: 435 ARTVKYGFGLEVPIGSA----LSTMYAKCGCLKDGTLVFRRMPARDV 477
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 150/351 (42%), Gaps = 39/351 (11%)
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
K H+ + K S + +++ Y + + A VFE + +DV WN +I G ++
Sbjct: 26 KALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQH- 84
Query: 315 LGEEG----LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
G G ++ F +M+ +P+ TF V T S L GR HA AIK+ +
Sbjct: 85 -GPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDV 143
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
V ++++ MY + G A F ++P + +SW ++I G A A +AL LF MR
Sbjct: 144 FVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRRE 203
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGR-----------------------YYFDCMKNKYF 467
+ ++ F VLSA + LV+ G+ Y C
Sbjct: 204 EEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDA 263
Query: 468 LQ-------PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
LQ S ++ ++ + G D+A+ L + + GI S + ++ AC
Sbjct: 264 LQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDL 323
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLI--LTEMYLSCGRREDAKRIFAQMKE 569
G+ + +++L S +Y++ L +MY C DA++ F ++E
Sbjct: 324 GAAWEGKQVHDYLLKL-GFESQIYVMTALVDMYAKCSSIVDARKGFDYLQE 373
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 52/274 (18%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P N +F + L + +L G+ +HAQ IK + + ++N+++ +YA+C ++ A
Sbjct: 4 PSNRSFFTALLQYTHNRSLQKGKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKFV 62
Query: 393 FSSVPIHDIISWNSIICGLAYHGY--AEKALELFERMRLTDFKPDDITFVGVLSACSY-- 448
F + D++SWN II G + HG + +ELF+RMR + P+ TF GV +A S
Sbjct: 63 FERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLV 122
Query: 449 ---------------------------------AGLVDQGRYYFDCMKNKYFLQPRSAHY 475
AGL + R FD M + S +
Sbjct: 123 DAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPER-----NSVSW 177
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
++ L EA+ L +R + + V+ ++L A + + G+++
Sbjct: 178 ATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVN----NGKQIHC 233
Query: 536 LEPNNSGVYLI-----LTEMYLSCGRREDAKRIF 564
+ N + ++ L MY CG +DA + F
Sbjct: 234 IAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTF 267
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 206/658 (31%), Positives = 339/658 (51%), Gaps = 51/658 (7%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
+ E + + D V N MI Y + G L A LF++MPER+ +++ +I+GLM+
Sbjct: 71 KFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMK 130
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNL 119
V+ + F+ ++VV+W + ISG+V NGL EAL++F G+ DV ++
Sbjct: 131 YGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSV 190
Query: 120 V---------------IGALVNCQ-------------------RMDLAESYFKEMGARDV 145
V +G +V +DLA F M RDV
Sbjct: 191 VRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDV 250
Query: 146 ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
SWT +++ V G + EAR++FD+MP ++ +W+ MIA Y +G A LF KM
Sbjct: 251 VSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQE 310
Query: 206 ----DLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEK---TWNSIISVLIRNGLVKEA 257
+++ + ++ L + R + A I+ + + +K +S+I + + G +
Sbjct: 311 GFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDG 370
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ N+ W +++ GY G + ++FEL+ ++ W +J G EN+ E
Sbjct: 371 RLVFDLILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCE 430
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
+ L+ F + SG +P+ +TF+SVL C+ + +LD G +H + IK+ V A+
Sbjct: 431 KVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALT 490
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDD 436
MYA+CG+I S+ F +P + ISW +I GLA G+A ++L LFE M R ++ P++
Sbjct: 491 DMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNE 550
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
+ + VL ACS+ GLVD+G +YF+ M+ Y ++P+ HYTCVVDLL R G + EA
Sbjct: 551 LMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEF-- 608
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
IR + W ALL C+ + + K+ E +++ +L NNS Y++L+ +Y S GR
Sbjct: 609 -IRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGR 667
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
D I M+E G+KK GCSW+++ + H F S D SH + + L LL +E+
Sbjct: 668 WIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSDEIYGTLQLLRSEM 725
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 185/434 (42%), Gaps = 71/434 (16%)
Query: 92 GYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIM 151
G + G + A + G + ++ L+I L NC++ + KE D+ M
Sbjct: 35 GLITQGNVLHAHLIKTGFSSQRYIAIKLLILYL-NCRKFAEIDQIVKEFDGSDLVVSNCM 93
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
++ V+ G +V+AR LFD+MP ++ +W+ +I+G + G V + F++ +++ SW
Sbjct: 94 ISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWT 153
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEK-------------------------------- 239
I+G V + A+ F ++ E+ +
Sbjct: 154 AAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKA 213
Query: 240 -------TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
NS+I++ +R G + A ++ ++ SWT ++ Y E G++ A ++F
Sbjct: 214 GFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIF 273
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ M R+ W+ MI ++ EE LK F +M + G P+ + F L+ + L L
Sbjct: 274 DEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALS 333
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
G IH KI ++ + +++I +Y +CG L F + +++ WNS++ G +
Sbjct: 334 AGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYS 393
Query: 413 YHG-------------------------------YAEKALELFERMRLTDFKPDDITFVG 441
+G EK LE+F + ++ P+ TF
Sbjct: 394 INGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSS 453
Query: 442 VLSACSYAGLVDQG 455
VL AC+ +D+G
Sbjct: 454 VLCACASIASLDKG 467
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 189/428 (44%), Gaps = 48/428 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R I A+ +FD+M +RD V+W ++ Y + G L A +F++MPER+ +++ +IA
Sbjct: 230 LRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIA 289
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF------HGMPLKDV 114
QS + A ++F M V++ N IS + C +LR HG K
Sbjct: 290 RYSQSGYAEEALKLFSKM-VQEGFKPN--ISCFACTLSALASLRALSAGINIHGHVTKIG 346
Query: 115 VSWNLVIGALV-----NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
+ ++ IG+ + C + D F + ++V W MV G GR+ E +LF+
Sbjct: 347 IDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEEXEELFE 406
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+P K+ +W +JAGYL+N ++F + L++G ++ S
Sbjct: 407 LIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTL----------LVSGQTPNK------ST 450
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
F + C + + + ++K Y +I T + Y + G++GS+
Sbjct: 451 FSSVLCACASIASLDKGMNVHGKIIKLGIQY-------DIFVGTALTDMYAKCGDIGSSK 503
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDL 348
+VFE M ++ W VMI GL E+ E L F +M + S +P+ SVL CS
Sbjct: 504 QVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHC 563
Query: 349 PTLDLG-----RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DII 402
+D G IK +T V + + +R G + A ++P +
Sbjct: 564 GLVDKGLWYFNSMEKVYGIKPKGKHYTCV----VDLLSRSGRLYEAEEFIRTIPFQPEAN 619
Query: 403 SWNSIICG 410
+W +++ G
Sbjct: 620 AWAALLSG 627
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 203/657 (30%), Positives = 333/657 (50%), Gaps = 79/657 (12%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP---------------- 48
+++ A+ +FD + +R+ V WN M+ GY +NG+ M LF++M
Sbjct: 399 KMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILS 458
Query: 49 -----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVT 85
E ++F NT++ + ++ A++ F+ + RD V+
Sbjct: 459 ACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVS 518
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAES---YFK 138
WN++I GYV DEA +F M L D VS ++ N Q ++ E +
Sbjct: 519 WNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLV 578
Query: 139 EMGARD-VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+ G + + + + +++ V+ G I AR +F MP++ V + N +IAGY N V A D
Sbjct: 579 KSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLVE-AID 637
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
LFQ+M + L N I F + + C + + L ++
Sbjct: 638 LFQEMQNEGL-----------NPSEIT-----FASLLDACTGPY--------KLNLGRQI 673
Query: 258 HSYLEKYP--YSNIASWTNVIVGYFEMGEVGSAIKVF-ELMTTRDVTVWNVMIFGLGEND 314
H ++K Y +++V Y A +F E + +W +I G +N
Sbjct: 674 HCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNG 733
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
EE L+ + +M + PD ATF SVL CS L +L GR IH+ + + +
Sbjct: 734 CSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGS 793
Query: 375 AMITMYARCGNIQSALLEFSSV-PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
A++ MYA+CG+++S++ F + +D+ISWNS+I G A +GYAE AL++F+ M+ T +
Sbjct: 794 AVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIR 853
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
PDD+TF+GVL+ACS+AG V +GR FD M + Y + PR H C++DLLGR+G + EA
Sbjct: 854 PDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEE 913
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
++++ E + +W LLGACRIH + G A E+++ELEP NS Y++L+ +Y +
Sbjct: 914 FIDKL---NFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAA 970
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
G ++ + M+E G++K PGCSWI + ++F++GD HP + LL L
Sbjct: 971 SGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDL 1027
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 151/611 (24%), Positives = 287/611 (46%), Gaps = 76/611 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
++ A F+++ +RD + WN ++ Y + G L+ + F + + FTY V++
Sbjct: 132 VEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSS 191
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYV------CNGLIDEALRVFHGMPLKDVV 115
+ ++ K+V G+ ++ +NS G + C L+D A ++F + D V
Sbjct: 192 CARLVDIDLGKQVHCGV-IKMGFEFNSFCEGSLIDMYSKCGSLVD-ARKIFDAVVDPDTV 249
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMG----ARDVASWTIMVNGLVREGRIVEARKLFDKM 171
SW +I V + A F++M D ++ ++ V GR+ +A LF +M
Sbjct: 250 SWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQM 309
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
P +V AWN+MI+G++ GC A D F+ M + S + + ++++ A++Y
Sbjct: 310 PNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNY-- 367
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
GL+ A + +++ SN+ +++I Y + ++ +A KV
Sbjct: 368 --------------------GLLVHAQA-IKQGLNSNVYVGSSLINMYAKCEKMEAAKKV 406
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F+ + R++ +WN M+ G +N + +K F +M+ G PD T+TS+L+ C+ L L
Sbjct: 407 FDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECL 466
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
++GRQ+H+ IK V N ++ MYA+CG ++ A +F + D +SWN+II G
Sbjct: 467 EMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGY 526
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
++A +F RM L PD+++ +LS C+ ++QG C K LQ
Sbjct: 527 VQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGE-QVHCFLVKSGLQTC 585
Query: 472 SAHYTCVVDLLGRFGLID------------------------------EAMNLLNEIRAD 501
+ ++D+ + G I+ EA++L E++ +
Sbjct: 586 LYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLVEAIDLFQEMQNE 645
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGE----IAGERVMELEPNNSGVYLILTEMYLSCGRR 557
G+ S + +LL AC + +G + +R + + + GV L++ MY++ R+
Sbjct: 646 GLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLV--MYMNSQRK 703
Query: 558 EDAKRIFAQMK 568
DA +F++ +
Sbjct: 704 TDADILFSEFQ 714
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/508 (24%), Positives = 218/508 (42%), Gaps = 85/508 (16%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
R+ +A +LF +MP + V WNVMI G+ K G A+ F M + + + + + ++
Sbjct: 297 GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVL 356
Query: 64 QS---------------------------------------DNVQGAKEVFDGMEVRDVV 84
+ + ++ AK+VFD ++ R++V
Sbjct: 357 SAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLV 416
Query: 85 TWNSMISGYVCNGLIDEALRVFHGM------PLKDVVSWNLVIGALVNCQRM--DLAESY 136
WN+M+ GY NG + +++F M P + + L A + C M L
Sbjct: 417 LWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFI 476
Query: 137 FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
K ++ +V+ + G + EAR+ F+ + +D +WN +I GY+ A
Sbjct: 477 IKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAF 536
Query: 197 DLFQKM----HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
++F++M D S +++G N + ++ + L+++G
Sbjct: 537 NMFRRMILDGIAPDEVSLASILSGCANLQALEQG---------------EQVHCFLVKSG 581
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
L + + + +++I Y + G + +A VF M +R V N +I G +
Sbjct: 582 L------------QTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQ 629
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK---IARNQF 369
NDL E + F +M+ G +P TF S+L C+ L+LGRQIH K + F
Sbjct: 630 NDL-VEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDF 688
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYHGYAEKALELFERMR 428
VS ++ MY A + FS I W +II G +G +E+AL+L++ M
Sbjct: 689 LGVS--LLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMH 746
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGR 456
+ +PD TF VL ACS + GR
Sbjct: 747 RNNARPDQATFASVLRACSILASLGDGR 774
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 214/506 (42%), Gaps = 63/506 (12%)
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++ C ++ A F ++ RD+ +W +++ R+G + + F + V
Sbjct: 122 IVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPN 181
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMH--------------DRDLTSWKQLINGLVNSRRI-D 224
A L + V DL +++H + L LV++R+I D
Sbjct: 182 QFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFD 241
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI----ASWTNVIVGYF 280
A + P+T +W ++I+ ++ GL +EA E + ++ VI
Sbjct: 242 AVVD-----PDTV--SWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACV 294
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+G + A +F M +V WNVMI G + E + FF M ++G +T S
Sbjct: 295 GLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGS 354
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
VL+ + L L+ G +HAQAIK N V +++I MYA+C +++A F ++ +
Sbjct: 355 VLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERN 414
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
++ WN+++ G A +GYA K ++LF MR F PD+ T+ +LSAC+ ++ GR
Sbjct: 415 LVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHS 474
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLI-------------------------------D 489
+ F T +VD+ + G + D
Sbjct: 475 FIIKHNFEYNLFVENT-LVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDED 533
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN---SGVYLI 546
EA N+ + DGI ++L C ++ GE +++ +G LI
Sbjct: 534 EAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLI 593
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGV 572
+MY+ CG E A+ +F+ M V
Sbjct: 594 --DMYVKCGAIEAARYVFSCMPSRSV 617
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 151/318 (47%), Gaps = 9/318 (2%)
Query: 255 KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
K H+ K+ + + + IV Y + G V A K F + RD+ WN ++
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
E+ + F ++ G SP+ T+ VL+ C+ L +DLG+Q+H IK+ +
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
++I MY++CG++ A F +V D +SW ++I G G E+AL++FE M+
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLV 280
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
PD + FV V++AC G +D F M N + + ++ + G EA++
Sbjct: 281 PDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVA-----WNVMISGHVKRGCDIEAID 335
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMY 551
+ G++ + + G++L A + G + + ++ + NS VY+ L MY
Sbjct: 336 FFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIK-QGLNSNVYVGSSLINMY 394
Query: 552 LSCGRREDAKRIFAQMKE 569
C + E AK++F + E
Sbjct: 395 AKCEKMEAAKKVFDALDE 412
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 214/650 (32%), Positives = 343/650 (52%), Gaps = 65/650 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYN 56
+R + +A +F KM +RD +WNV++ GY K G D A+ L+++M +++T+
Sbjct: 143 VRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFP 202
Query: 57 TVIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+V+ ++ KE+ G E DV N++I+ YV G I A +F MP
Sbjct: 203 SVLKTCAGVSDIARGKEIHAHVIRFGFE-SDVDVGNALITMYVKCGDISNARMLFDKMPK 261
Query: 112 KDVVSWNLVI-GALVNCQRMDLAE--SYFKEMGAR-DVASWTIMVNGLV-----REGRIV 162
+D +SWN +I G N ++ E S +E+ D+ + T + + R GR V
Sbjct: 262 RDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGV 321
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ + D+ N +I Y G + AE +F +M +D+ SW +I LV+ +
Sbjct: 322 HGYVVKSEF-GGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKL 380
Query: 223 IDAAISYFKQM------PETCEKTWNSIIS----------------VLIRNGLVKEAHSY 260
A+ +K M P+ E T S++S + I+ GLV
Sbjct: 381 PFKAVETYKMMELEGILPD--EITLVSVLSACACIGHLDLGIRLHEIAIKTGLV------ 432
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
S++ ++I Y + V +A++VF ++ ++V W +I GL N+ E L
Sbjct: 433 ------SHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEAL 486
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
FF QMKES P++ T SVL+ C+ + L G++IHA A++ + NA++ MY
Sbjct: 487 LFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMY 545
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
RCG AL +F+S D+ +WN ++ G A G A+ A+ELF++M + PD+ITF+
Sbjct: 546 VRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFI 604
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE--I 498
+L ACS +G+V +G YF+ MKNKY L P HY CVVD+LGR G +D+A + + + I
Sbjct: 605 SLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPI 664
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
R D +WGALL ACRIH N+++GEIA +RV E + + G Y++L +Y CG +
Sbjct: 665 RPDA-----AIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWD 719
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
++ + M+E G+ +PGCSW++I H FLSGD+SH + + +L+
Sbjct: 720 KVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLD 769
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 229/498 (45%), Gaps = 54/498 (10%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV- 114
N +++ ++ N+ A VF M RDV +WN ++ GY G DEAL ++H M ++
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 115 VSWNLVIGALVNCQRM-DLAESYFKEMGAR--------DVASWTIMVNGLVREGRIVEAR 165
+ L C + D+A KE+ A DV ++ V+ G I AR
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARG--KEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
LFDKMP +D +WN MI+GY +NG +LF M R+L+ +D
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMM--RELS--------------VDP 297
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGE 284
+ + CE +L L + H Y+ K + S N ++ Y +G
Sbjct: 298 DLITMTTVASACE--------LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGR 349
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+ A VF M ++DV W MI L + L + ++ + M+ G PD T SVL+
Sbjct: 350 LEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSA 409
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
C+ + LDLG ++H AIK VSN++I MY++C + +AL F ++ +++SW
Sbjct: 410 CACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSW 469
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-YYFDCMK 463
S+I GL + + +AL F +M+ KP+ +T + VLSAC+ G + +G+ + ++
Sbjct: 470 TSLILGLRINNRSFEALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALR 528
Query: 464 NKY----FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
FL ++D+ R G A+N N + D T W LL
Sbjct: 529 TGVGFDGFLP------NAILDMYVRCGRKVPALNQFNSQKKD-----VTAWNILLTGYAQ 577
Query: 520 HNNIKVGEIAGERVMELE 537
K+ ++++ELE
Sbjct: 578 QGQAKLAVELFDKMLELE 595
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 214/650 (32%), Positives = 343/650 (52%), Gaps = 65/650 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYN 56
+R + +A +F KM +RD +WNV++ GY K G D A+ L+++M +++T+
Sbjct: 143 VRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFP 202
Query: 57 TVIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+V+ ++ KE+ G E DV N++I+ YV G I A +F MP
Sbjct: 203 SVLKTCAGVSDIARGKEIHAHVIRFGFE-SDVDVGNALITMYVKCGDISNARMLFDKMPK 261
Query: 112 KDVVSWNLVI-GALVNCQRMDLAE--SYFKEMGAR-DVASWTIMVNGLV-----REGRIV 162
+D +SWN +I G N ++ E S +E+ D+ + T + + R GR V
Sbjct: 262 RDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGV 321
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ + D+ N +I Y G + AE +F +M +D+ SW +I LV+ +
Sbjct: 322 HGYVVKSEF-GGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKL 380
Query: 223 IDAAISYFKQM------PETCEKTWNSIIS----------------VLIRNGLVKEAHSY 260
A+ +K M P+ E T S++S + I+ GLV
Sbjct: 381 PFKAVETYKMMELEGILPD--EITLVSVLSACACIGHLDLGIRLHEIAIKTGLV------ 432
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
S++ ++I Y + V +A++VF ++ ++V W +I GL N+ E L
Sbjct: 433 ------SHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEAL 486
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
FF QMKES P++ T SVL+ C+ + L G++IHA A++ + NA++ MY
Sbjct: 487 LFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMY 545
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
RCG AL +F+S D+ +WN ++ G A G A+ A+ELF++M + PD+ITF+
Sbjct: 546 VRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFI 604
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE--I 498
+L ACS +G+V +G YF+ MKNKY L P HY CVVD+LGR G +D+A + + + I
Sbjct: 605 SLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPI 664
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
R D +WGALL ACRIH N+++GEIA +RV E + + G Y++L +Y CG +
Sbjct: 665 RPDA-----AIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWD 719
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
++ + M+E G+ +PGCSW++I H FLSGD+SH + + +L+
Sbjct: 720 KVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLD 769
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 229/498 (45%), Gaps = 54/498 (10%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV- 114
N +++ ++ N+ A VF M RDV +WN ++ GY G DEAL ++H M ++
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 115 VSWNLVIGALVNCQRM-DLAESYFKEMGAR--------DVASWTIMVNGLVREGRIVEAR 165
+ L C + D+A KE+ A DV ++ V+ G I AR
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARG--KEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
LFDKMP +D +WN MI+GY +NG +LF M R+L+ +D
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMM--RELS--------------VDP 297
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGE 284
+ + CE +L L + H Y+ K + S N ++ Y +G
Sbjct: 298 DLITMTTVASACE--------LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGR 349
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+ A VF M ++DV W MI L + L + ++ + M+ G PD T SVL+
Sbjct: 350 LEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSA 409
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
C+ + LDLG ++H AIK VSN++I MY++C + +AL F ++ +++SW
Sbjct: 410 CACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSW 469
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-YYFDCMK 463
S+I GL + + +AL F +M+ KP+ +T + VLSAC+ G + +G+ + ++
Sbjct: 470 TSLILGLRINNRSFEALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALR 528
Query: 464 NKY----FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
FL ++D+ R G A+N N + D T W LL
Sbjct: 529 TGVGFDGFLP------NAILDMYVRCGRKVPALNQFNSQKKD-----VTAWNILLTGYAQ 577
Query: 520 HNNIKVGEIAGERVMELE 537
K+ ++++ELE
Sbjct: 578 QGQAKLAVELFDKMLELE 595
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 201/663 (30%), Positives = 333/663 (50%), Gaps = 77/663 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF----NQMPERDMFTY- 55
M+ + ++ + +FD+M +R+ VTW +I GY +N D + LF N+ + + FT+
Sbjct: 139 MKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFA 198
Query: 56 ----------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVR 81
N++I ++ NV+ A+ +FD EV+
Sbjct: 199 AALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK 258
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYF 137
VVTWNSMISGY NGL EAL +F+ M L V S+ VI N L E F
Sbjct: 259 SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN-----LKELRF 313
Query: 138 KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
E V + + + +R +V K + A + + + GCVG
Sbjct: 314 TEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA---------LRLFKEIGCVG---- 360
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV--- 254
++ SW +I+G + + + A+ F +M + SV++ V
Sbjct: 361 --------NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP 412
Query: 255 KEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
E H+ + K Y ++ T ++ Y ++G+V A KVF + +D+ W+ M+ G +
Sbjct: 413 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL-PTLDLGRQIHAQAIKIARNQFTTV 372
E +K F ++ + G P+ TF+S+L +C+ ++ G+Q H AIK + V
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
S+A++TMYA+ GNI+SA F D++SWNS+I G A HG A KAL++F+ M+
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
K D +TF+GV +AC++AGLV++G YFD M + P H +C+VDL R G +++AM
Sbjct: 593 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 652
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
++ + T+W +L ACR+H ++G +A E+++ ++P +S Y++L+ MY
Sbjct: 653 KVIENMPNPA---GSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYA 709
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
G ++ ++ M E VKKEPG SWI++ + + FL+GD SHP ++ L L T
Sbjct: 710 ESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLST 769
Query: 613 EIE 615
++
Sbjct: 770 RLK 772
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 203/467 (43%), Gaps = 67/467 (14%)
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
A VA I G V R+ A LFDK P +D +++ ++ G+ +G A+ LF
Sbjct: 24 ANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLN 83
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAI--SYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
+H + +D +I S K C++ + ++ H
Sbjct: 84 IHRLGM--------------EMDCSIFSSVLKVSATLCDELFG------------RQLHC 117
Query: 260 YLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
K+ + +++ T+++ Y + KVF+ M R+V W +I G N + +E
Sbjct: 118 QCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDE 177
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L F++M+ G P++ TF + L + ++ G Q+H +K ++ VSN++I
Sbjct: 178 VLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLIN 237
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
+Y +CGN++ A + F + +++WNS+I G A +G +AL +F MRL + + +
Sbjct: 238 LYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESS 297
Query: 439 FVGVLSACS-----------YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
F V+ C+ + +V G + FD + L + T ++D L F
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYG-FLFD-QNIRTALMVAYSKCTAMLDALRLFKE 355
Query: 488 I----------------------DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKV 525
I +EA++L +E++ G+ + + +L A + I
Sbjct: 356 IGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV---ISP 412
Query: 526 GEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
E+ + V +S V L + Y+ G+ E+A ++F+ + + +
Sbjct: 413 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 211/493 (42%), Gaps = 66/493 (13%)
Query: 30 GYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFD-----GMEVRDVV 84
G + L NA LF++ P RD +Y +++ G + Q AK +F GME+ D
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEM-DCS 94
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
++S++ V L DE + G ++CQ + F + D
Sbjct: 95 IFSSVLK--VSATLCDE------------------LFGRQLHCQCIKFG---FLD----D 127
Query: 145 VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD 204
V+ T +V+ ++ + RK+FD+M ++V W +I+GY N LF +M +
Sbjct: 128 VSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQN 187
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
NS AA+ + E + +V+++NGL K
Sbjct: 188 EGTQP---------NSFTFAAALGVLAE--EGVGGRGLQVHTVVVKNGLDK-------TI 229
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
P SN ++I Y + G V A +F+ + V WN MI G N L E L F
Sbjct: 230 PVSN-----SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
M+ + ++F SV+ +C++L L Q+H +K + A++ Y++C
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 385 NIQSALLEFSSVP-IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
+ AL F + + +++SW ++I G + E+A++LF M+ +P++ T+ +L
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
+A ++ + +K Y + S T ++D + G ++EA + + I I
Sbjct: 405 TALP---VISPSEVHAQVVKTNY--ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 504 EVSPTVWGALLGA 516
W A+L
Sbjct: 460 ----VAWSAMLAG 468
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 197/648 (30%), Positives = 338/648 (52%), Gaps = 38/648 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNA---MCLFNQMPERDMFTYNTV 58
+ ++ +A ++F+ + +D V+WN +I GY +NG + ++ M LF +M +D+
Sbjct: 61 KCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYT 120
Query: 59 IAGL------MQSDNV--QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
+AG+ +QS V Q V D+ S++ Y GL+++ L+VF MP
Sbjct: 121 LAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYF------KEMGARDVASWTIMVNGL-----VREG 159
++ +W+ ++ R++ A F KE G+ +T +++ L V G
Sbjct: 181 ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLG 240
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
R + + + + V N ++ Y + A +F DR+ +W ++ G
Sbjct: 241 RQIHCITIKNGLLGF-VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ 299
Query: 220 SRRIDAAISYFKQM-PETCEKTWNSIISVL--------IRNGLVKEAHSYLEKYPYS-NI 269
+ A+ F +M + + +I+ VL + G K+ HS+L K + ++
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEG--KQLHSFLLKLGFERHL 357
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
+ T ++ Y + G + A K F+ + RDV +W +I G +N EE L + +MK +
Sbjct: 358 FATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTA 417
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G P++ T SVL CS L TL+LG+Q+H IK + +A+ TMY++CG+++
Sbjct: 418 GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDG 477
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
L F P D++SWN++I GL+++G ++ALELFE M +PDD+TFV ++SACS+
Sbjct: 478 NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHK 537
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
G V++G +YF+ M ++ L P+ HY C+VDLL R G + EA I + I+ +
Sbjct: 538 GFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEF---IESANIDHGLCL 594
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
W LL AC+ H ++G AGE++M L S Y+ L+ +Y + GR D +R++ M+
Sbjct: 595 WRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRA 654
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
NGV KE GCSWI++ + HVF+ GD+ HP + L+ L+ ++ E
Sbjct: 655 NGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEE 702
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 202/454 (44%), Gaps = 65/454 (14%)
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG---VAEDLFQKMHDRD 206
++VN + G++ +A +F+ + KDV +WN +I GY NG + LF++M +D
Sbjct: 54 VLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQD 113
Query: 207 LTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY-P 265
+ + G+ + S L + + ++AH+ + K
Sbjct: 114 ILPNAYTLAGIFKAE------------------------SSLQSSTVGRQAHALVVKMSS 149
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK---F 322
+ +I T+++ Y + G V +KVF M R+ W+ M+ G EE +K
Sbjct: 150 FGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL 209
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F++ KE G D FT+VL+ + + LGRQIH IK F +SNA++TMY++
Sbjct: 210 FLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSK 268
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
C ++ A F S + I+W++++ G + +G + +A++LF RM KP + T VGV
Sbjct: 269 CESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGV 328
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI-------------- 488
L+ACS +++G+ + F + A T +VD+ + G +
Sbjct: 329 LNACSDICYLEEGKQLHSFLLKLGFERHLFA-TTALVDMYAKAGCLADARKGFDCLQERD 387
Query: 489 -----------------DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAG 530
+EA+ L ++ GI + ++L AC +++G ++ G
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ + L+ MY CG ED +F
Sbjct: 448 HTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF 481
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 34/294 (11%)
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
+ LT Q N LV R + I + TC + N +++ + G + +AHS
Sbjct: 19 KKLTHHSQQRN-LVAGRAVHGQI--IRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAI 75
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
++ SW ++I GY + G + S+ V +L F
Sbjct: 76 ICKDVVSWNSLITGYSQNGGISSSYTVMQL----------------------------FR 107
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
+M+ P+ T + S L + +GRQ HA +K++ V +++ MY + G
Sbjct: 108 EMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAG 167
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER-MRLTDFKPD-DITFVGV 442
++ L F+ +P + +W++++ G A G E+A+++F +R + D D F V
Sbjct: 168 LVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAV 227
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
LS+ + V GR C+ K L A +V + + ++EA + +
Sbjct: 228 LSSLAATIYVGLGR-QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFD 280
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P +T LT S L GR +H Q I+ + +N ++ YA+CG + A
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKA---LELFERMRLTDFKPDDITFVGVLSA 445
F+++ D++SWNS+I G + +G + ++LF MR D P+ T G+ A
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 207/659 (31%), Positives = 341/659 (51%), Gaps = 51/659 (7%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
+ E + + D V N MI Y + G L A LF++MPER+ +++ +I+GLM+
Sbjct: 71 KFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMK 130
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNL 119
V+ + F+ ++VV+W + ISG+V NGL EAL++F G+ DV ++
Sbjct: 131 YGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSV 190
Query: 120 V---------------IGALVNCQ-------------------RMDLAESYFKEMGARDV 145
V +G +V +DLA F M RDV
Sbjct: 191 VRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDV 250
Query: 146 ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM--- 202
SWT +++ V G + EAR++FD+MP ++ +W+ MIA Y +G A LF KM
Sbjct: 251 VSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQE 310
Query: 203 -HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEK---TWNSIISVLIRNGLVKEA 257
+++ + ++ L + R + A I+ + + +K +S+I + + G +
Sbjct: 311 GFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDG 370
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ N+ W +++ GY G + ++FEL+ ++ W +I G EN+ E
Sbjct: 371 RLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCE 430
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
+ L+ F + SG +P+ +TF+SVL C+ + +LD G +H + IK+ V A+
Sbjct: 431 KVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALT 490
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDD 436
MYA+CG+I S+ F +P + ISW +I GLA G+A ++L LFE M R ++ P++
Sbjct: 491 DMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNE 550
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
+ + VL ACS+ GLVD+G +YF+ M+ Y ++P+ HYTCVVDLL R G + EA
Sbjct: 551 LMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEF-- 608
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
IR + W ALL C+ + + K+ E +++ +L NNS Y++L+ +Y S GR
Sbjct: 609 -IRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGR 667
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
D I M+E G+KK GCSW+++ + H F S D SH + + + L LL +E++
Sbjct: 668 WIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEMK 726
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 186/434 (42%), Gaps = 71/434 (16%)
Query: 92 GYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIM 151
G + G + A + G + ++ L+I L NC++ + KE D+ M
Sbjct: 35 GLITQGNVLHAHLIKTGFSSQRYIAIKLLILYL-NCRKFAEIDQIVKEFDGSDLVVSNCM 93
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
++ V+ G +V+AR LFD+MP ++ +W+ +I+G + G V + F++ +++ SW
Sbjct: 94 ISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWT 153
Query: 212 QLINGLVNS-----------RRIDAAIS----YFKQMPETCEK----------------- 239
I+G V + R +++ + F + C +
Sbjct: 154 AAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKA 213
Query: 240 -------TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
NS+I++ +R G + A ++ ++ SWT ++ Y E G++ A ++F
Sbjct: 214 GFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIF 273
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ M R+ W+ MI ++ EE LK F +M + G P+ + F L+ + L L
Sbjct: 274 DEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALS 333
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
G IH KI ++ + +++I +Y +CG L F + +++ WNS++ G +
Sbjct: 334 AGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYS 393
Query: 413 YHG-------------------------------YAEKALELFERMRLTDFKPDDITFVG 441
+G EK LE+F + ++ P+ TF
Sbjct: 394 INGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSS 453
Query: 442 VLSACSYAGLVDQG 455
VL AC+ +D+G
Sbjct: 454 VLCACASIASLDKG 467
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 189/428 (44%), Gaps = 48/428 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R I A+ +FD+M +RD V+W ++ Y + G L A +F++MPER+ +++ +IA
Sbjct: 230 LRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSAMIA 289
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF------HGMPLKDV 114
QS + A ++F M V++ N IS + C +LR HG K
Sbjct: 290 RYSQSGYAEEALKLFSKM-VQEGFKPN--ISCFACTLSALASLRALSAGINIHGHVTKIG 346
Query: 115 VSWNLVIGALV-----NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
+ ++ IG+ + C + D F + ++V W MV G GR+ E +LF+
Sbjct: 347 IDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFE 406
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+P K+ +W +IAGYL+N ++F + L++G ++ S
Sbjct: 407 LIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTL----------LVSGQTPNK------ST 450
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
F + C + + + ++K Y +I T + Y + G++GS+
Sbjct: 451 FSSVLCACASIASLDKGMNVHGKIIKLGIQY-------DIFVGTALTDMYAKCGDIGSSK 503
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP-SPDNATFTSVLTICSDL 348
+VFE M ++ W VMI GL E+ E L F +M+ + +P+ SVL CS
Sbjct: 504 QVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHC 563
Query: 349 PTLDLG-----RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DII 402
+D G IK +T V + + +R G + A ++P +
Sbjct: 564 GLVDKGLWYFNSMEKVYGIKPKGKHYTCV----VDLLSRSGRLYEAEEFIRTIPFQPEAN 619
Query: 403 SWNSIICG 410
+W +++ G
Sbjct: 620 AWAALLSG 627
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 205/649 (31%), Positives = 326/649 (50%), Gaps = 81/649 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------- 48
N I +A+ LFD+MP +D V WNVM+ GY KNG DNA +F +M
Sbjct: 194 ENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFAC 253
Query: 49 --------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
E D NT++A + ++ A+ +FD M D
Sbjct: 254 VLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTD 313
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWN-----LVIGALVNCQRMDLA 133
+VTWN MISGYV NG +DEA +FH M D ++++ L GA + Q ++
Sbjct: 314 LVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLR-QGKEIH 372
Query: 134 ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ + DV + +++ + + ARK+FD+ D+ MI+GY+ NG
Sbjct: 373 CYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNN 432
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A ++F+ W L+ R +++ +P + L L
Sbjct: 433 NALEIFR---------W------LLQERMRANSVTLASVLPAC---------AGLAALTL 468
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
KE H ++ K + + I+ Y + G + A + F ++ +D WN MI +
Sbjct: 469 GKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQ 528
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N EE + F QM +G D + ++ L+ C++LP L G++IHA ++ A
Sbjct: 529 NGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFA 588
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+A+I MY++CGN+ A F ++ + +SWNSII HG + +L LF M
Sbjct: 589 ESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGI 648
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
+PD +TF+ ++SAC +AG VD+G +YF CM + + R HY C+VDL GR G ++EA
Sbjct: 649 QPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAF 708
Query: 493 NLLNEIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
++N + SP VWG LLGACR+H N+++ E+A + +L+P NSG Y++L+ +
Sbjct: 709 GMINS-----MPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNV 763
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
+ + G+ E +I + MKE GV+K PGCSWI +N+ H+F++ D SHP+
Sbjct: 764 HANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQ 812
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 156/599 (26%), Positives = 253/599 (42%), Gaps = 124/599 (20%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTY------ 55
+A+N+F ++ + WN MIRG+ G D A+ + +M P++ F Y
Sbjct: 99 DAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACG 158
Query: 56 --NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
N+V G + D +Q F G E+ DV +S+I Y NG I +A +F MP KD
Sbjct: 159 GLNSVALGRVVHDKIQ-----FMGFEL-DVFVGSSLIKFYSENGCIHDARYLFDRMPSKD 212
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARD-------------VASWTIMVN------G 154
V WN+++ V D A F EM + V + IM+N G
Sbjct: 213 GVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHG 272
Query: 155 LV--------------------REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
LV + G + +AR+LFD MP D+ WN MI+GY+ NG +
Sbjct: 273 LVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDE 332
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A LF +M +++R +I++ +P E +R G
Sbjct: 333 ASCLFHEM---------------ISARMKPDSITFSSFLPLLSE-------GATLRQG-- 368
Query: 255 KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
KE H Y+ + S ++ + +I YF+ +V A K+F+ T D+ V MI G N
Sbjct: 369 KEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLN 428
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
+ L+ F + + ++ T SVL C+ L L LG+++H +K V
Sbjct: 429 GMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVG 488
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
+A++ MYA+CG + A F + D + WNS+I + +G E+A++LF +M + K
Sbjct: 489 SAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTK 548
Query: 434 PDDITFVGVLSAC-----------------------------------SYAGLVDQGRYY 458
D ++ LSAC S G +D
Sbjct: 549 YDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRV 608
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
FD M+ K + ++ G G + +++NL + + DGI+ + A++ AC
Sbjct: 609 FDTMEEK-----NEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISAC 662
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 194/450 (43%), Gaps = 44/450 (9%)
Query: 156 VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
+ +GR A+ L + + + L+ Y+ G A+++F ++ W +I
Sbjct: 62 LSQGRQAHAQMLVNGIGYNGILGTKLL-GMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIR 120
Query: 216 GLVNSRRIDAAISYFKQM------PETCEKTWNSIISV---LIRNGLVKEAHSYLEKYPY 266
G + D A+ ++ +M P+ + T+ +I L L + H ++ +
Sbjct: 121 GFTMMGQFDFALLFYFKMLGCGTLPD--KYTFPYVIKACGGLNSVALGRVVHDKIQFMGF 178
Query: 267 S-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
++ +++I Y E G + A +F+ M ++D +WNVM+ G +N + F++
Sbjct: 179 ELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFME 238
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ + +P++ TF VL++C+ ++ G Q+H + + V+N ++ MYA+CG+
Sbjct: 239 MRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGH 298
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+ A F +P D+++WN +I G +G+ ++A LF M KPD ITF L
Sbjct: 299 LFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPL 358
Query: 446 CSYAGLVDQGR-----------------------YYFDC----MKNKYFLQPRSAHYTCV 478
S + QG+ YF C M K F Q
Sbjct: 359 LSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVC 418
Query: 479 VDLLGRF---GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVM 534
++ + G+ + A+ + + + + + ++L AC + +G E+ G +
Sbjct: 419 TAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILK 478
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ V + +MY CGR + A + F
Sbjct: 479 NGHGGSCYVGSAIMDMYAKCGRLDLAHQTF 508
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 94/268 (35%), Gaps = 41/268 (15%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
S+L C+D L GRQ HAQ + + ++ MY CG A F +
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC----------- 446
+ WN +I G G + AL + +M PD TF V+ AC
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 447 ------------------------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
S G + RY FD M +K + +++
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSK-----DGVLWNVMLNGY 223
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNS 541
+ G D A + E+R + + +L C I G ++ G V +S
Sbjct: 224 VKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDS 283
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKE 569
V L MY CG DA+R+F M +
Sbjct: 284 PVANTLLAMYAKCGHLFDARRLFDMMPK 311
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 195/637 (30%), Positives = 338/637 (53%), Gaps = 31/637 (4%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVI-- 59
+ +A+ +F++MP RD V+WN +I GY NG+ + A+ ++ + D +T ++V+
Sbjct: 166 LDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRA 225
Query: 60 ----AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYV-CNGLIDEALRVFHGMPLKDV 114
+ + D + G E G++ +DV+ N ++S Y NGLID R+F M L+D
Sbjct: 226 CGGLGSVEEGDIIHGLIEKI-GIK-KDVIVNNGLLSMYCKFNGLID-GRRIFDKMVLRDA 282
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGAR---DVASWTIMVNGLVREGRIVEARKLFDKM 171
VSWN +I + + F EM + D+ + T ++ G + + + D M
Sbjct: 283 VSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYM 342
Query: 172 PAK----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
D A N++I Y G + ++++F M +D SW +IN + + D A+
Sbjct: 343 ITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAM 402
Query: 228 SYFKQMPETCEK---TWNSIISVLIRNG---LVKEAHSYLEKYPY-SNIASWTNVIVGYF 280
FK M + T+ ++S+ + G L KE H L K + SNI ++ Y
Sbjct: 403 KLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYA 462
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ GE+G ++KVFE M RD+ WN +I ++ GL+ +M+ G +PD AT S
Sbjct: 463 KCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLS 522
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
+L +CS L G++IH K+ V N +I MY++CG+++++ F + D
Sbjct: 523 ILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKD 582
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+++W ++I +G +KA+ F M PD + FV ++ ACS++GLV++G YF
Sbjct: 583 VVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFH 642
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
MK Y ++PR HY CVVDLL R L+D+A + I + ++ ++WGALL ACR+
Sbjct: 643 RMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF---ILSMPLKPDSSIWGALLSACRMS 699
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
+ ++ E ER++EL P+++G Y++++ +Y + G+ + + I +K G+KK+PGCSW
Sbjct: 700 GDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSW 759
Query: 581 IQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
++I + +VF +G +F + LL +L + +E
Sbjct: 760 MEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKE 796
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 228/492 (46%), Gaps = 50/492 (10%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYF 137
+V WNS+I NGL EAL ++ D ++ VI A ++A+S
Sbjct: 79 NVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 138
Query: 138 K---EMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+MG D+ +++ R + +ARK+F++MP +DV +WN +I+GY NG
Sbjct: 139 DRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWN 198
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A +++ + R+L G+V P++ T +S++ G
Sbjct: 199 EALEIYYRF--RNL--------GVV---------------PDS--YTMSSVLRACGGLGS 231
Query: 254 VKEA---HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
V+E H +EK N ++ Y + + ++F+ M RD WN MI G
Sbjct: 232 VEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICG 291
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
+ L EE +K F++M PD T TS+L C L L+ G+ +H I
Sbjct: 292 YSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECD 350
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
TT SN +I MYA+CGN+ ++ FS + D +SWNS+I +G ++A++LF+ M+
Sbjct: 351 TTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK- 409
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
TD KPD +T+V +LS + G + G+ C K +VD+ + G +
Sbjct: 410 TDVKPDSVTYVMLLSMSTQLGDLHLGK-ELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMG 468
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHN---NIKVGEIAGERVMELEPNNSGVYLI 546
+++ + ++A I W ++ +C +H+ N+ + I+ R + P+ + + I
Sbjct: 469 DSLKVFENMKARDI----ITWNTIIASC-VHSEDCNLGLRMISRMRTEGVTPDMATMLSI 523
Query: 547 LTEMYLSCGRRE 558
L L +R+
Sbjct: 524 LPVCSLLAAKRQ 535
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 1/184 (0%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
+I Y + S+ VF L + + +V +WN +I L N L E L + + +
Sbjct: 52 AKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRL 111
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
PD TF SV+ C+ L ++ + IH + + + + NA+I MY R ++ A
Sbjct: 112 QPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARK 171
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F +P+ D++SWNS+I G +GY +ALE++ R R PD T VL AC G
Sbjct: 172 VFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGS 231
Query: 452 VDQG 455
V++G
Sbjct: 232 VEEG 235
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 204/660 (30%), Positives = 333/660 (50%), Gaps = 75/660 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVI-- 59
+ EA+ +FD + + VTWN +I GY + G + A LF QM E + T+ +V+
Sbjct: 108 VTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDA 167
Query: 60 ----AGL-----------------------------MQSDNVQGAKEVFDGMEVRDVVTW 86
AGL ++ ++ A++VFDG+ +RDV T+
Sbjct: 168 CSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTF 227
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR--- 143
N M+ GY +G ++A +F+ M + + ++++ A ++ K + A+
Sbjct: 228 NVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMN 287
Query: 144 -----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
D+ T ++ G I AR++FD M +DV +W +MI GY +NG + A L
Sbjct: 288 AGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGL 347
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
F M + + + ++N+ I A +++ +E H
Sbjct: 348 FATMQEEGIQPDRITYMHIMNACAISANLNH------------------------AREIH 383
Query: 259 SYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
S ++ + +++ T ++ Y + G + A +VF+ M RDV W+ MI EN G
Sbjct: 384 SQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGT 443
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E + F MK S PD T+ ++L C L LD+G +I+ QAIK + NA+I
Sbjct: 444 EAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALI 503
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
M A+ G+++ A F ++ D+I+WN++I G + HG A +AL LF+RM F+P+ +
Sbjct: 504 IMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSV 563
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
TFVGVLSACS AG VD+GR +F + + P Y C+VDLLGR G +DEA L
Sbjct: 564 TFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELL--- 620
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
I++ ++ + ++W +LL ACRIH N+ V E A ER + ++P + VY+ L+ MY + G
Sbjct: 621 IKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMW 680
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
E+ ++ M+ G++KE GC+WI++ H F+ D SHP + L L I+RE
Sbjct: 681 ENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKRE 740
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 137/555 (24%), Positives = 237/555 (42%), Gaps = 83/555 (14%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------------- 47
++ + +A+ +FD + RD T+NVM+ GY K+G + A LF +M
Sbjct: 204 VKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFL 263
Query: 48 --------PER------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
PE D+ ++I +++GA+ VFD M+VR
Sbjct: 264 SILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVR 323
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
DVV+W MI GY NG I++A +F M + + + ++N + ++ +E+
Sbjct: 324 DVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIH 383
Query: 142 AR-DVASW-------TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
++ D+A + T +V+ + G I +AR++FD MP +DV +W+ MI Y++NG
Sbjct: 384 SQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGT 443
Query: 194 VAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI 249
A + F M + D ++ L+N + +D + + Q I
Sbjct: 444 EAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQA---------------I 488
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
+ LV P N +I+ + G V A +F+ M RDV WN MI G
Sbjct: 489 KADLVSHV-------PLGNA-----LIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGG 536
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
+ E L F +M + P++ TF VL+ CS +D GR+ ++ R
Sbjct: 537 YSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLE-GRGIV 595
Query: 370 TTVS--NAMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELFER 426
TV M+ + R G + A L S+P+ S W+S++ HG + A ER
Sbjct: 596 PTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAER 655
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
+ D D +V + + AG+ + M+++ + + + V + F
Sbjct: 656 CLMID-PYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFV 714
Query: 487 LIDEAMNLLNEIRAD 501
+ D + L+ EI A+
Sbjct: 715 VEDRSHPLVGEIYAE 729
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 148/341 (43%), Gaps = 41/341 (12%)
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
NI +I Y G V A ++F+ + + V WN +I G + +E F QM
Sbjct: 91 NIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMV 150
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
+ G P TF SVL CS L+ G+++HAQ + + A+++MY + G++
Sbjct: 151 DEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMD 210
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL---- 443
A F + I D+ ++N ++ G A G EKA ELF RM+ KP+ I+F+ +L
Sbjct: 211 DARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCW 270
Query: 444 ------------SACSYAGLVDQ-------------------GRYYFDCMKNKYFLQPRS 472
+ C AGLVD R FD MK + +
Sbjct: 271 TPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVS--- 327
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI-KVGEIAGE 531
+T +++ G I++A L ++ +GI+ + ++ AC I N+ EI +
Sbjct: 328 --WTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQ 385
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ + V L MY CG +DA+++F M V
Sbjct: 386 VDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDV 426
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 41/280 (14%)
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
++ E G D+ T+ + C++L LG+Q+ I+ R N +I +Y+ CG
Sbjct: 47 RLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICG 106
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
N+ A F SV +++WN++I G A G+ ++A LF +M +P ITF+ VL
Sbjct: 107 NVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLD 166
Query: 445 ACSY-----------------------------------AGLVDQGRYYFDCMKNKYFLQ 469
ACS G +D R FD + +
Sbjct: 167 ACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIR---- 222
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
+ + +V + G ++A L ++ G++ + + ++L C + G+
Sbjct: 223 -DVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAV 281
Query: 530 GERVMELE-PNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+ M ++ V L MY +CG E A+R+F MK
Sbjct: 282 HAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMK 321
>gi|125560040|gb|EAZ05488.1| hypothetical protein OsI_27705 [Oryza sativa Indica Group]
Length = 1165
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/629 (28%), Positives = 321/629 (51%), Gaps = 60/629 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R+++AQ LFD+MP RD ++W ++ Y G L +A +F+ MP R+ ++N +++
Sbjct: 50 RRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAPSWNALLSV 109
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL--KDVVSWNL 119
+++ + A +F M ++ V++ ++ISG ++ EA V+ MP +D V N
Sbjct: 110 YLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELVYEEMPWQWRDPVGSNA 169
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++ + + +A F+ M RDV SW+ MV+GL + G + EAR++FD MP ++V +W
Sbjct: 170 LMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSW 229
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA-------------- 225
MI GY+ G LF M + +N S +DA
Sbjct: 230 TSMIRGYVKRGMCRDGLLLFLNMRREGVQ-----VNTTTLSVALDACAAASLAREGIQIH 284
Query: 226 ------------------------------AISYFKQMPETCEKTWNSIISVLIRNGLVK 255
A F M + +WNS+I+ +++ +V+
Sbjct: 285 NLIISMGFELDIFLGDSIIIMYSRFGCMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVE 344
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
EAH + + SWT+++VG+ G + ++++FE M +D W +I N
Sbjct: 345 EAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITNGD 404
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
+++F +M + G P+ F+ +L+ + L L+ GRQ HA +I + + V +
Sbjct: 405 YLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVHTS 464
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
+++MYA+CG + A FSS+ +I+ NS+I HG+ E AL+LF +M+ +KP+
Sbjct: 465 LVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPN 524
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
+TF+G+L+ C+ AG V QG YF+ M+ Y ++P HYTC+VDLLGR GL+ EA+ ++
Sbjct: 525 HVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMI 584
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
N + + W ALL A +H+N+ +IA ++++E +P ++ Y +L+ M+ S G
Sbjct: 585 NSMPQND---HSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVLSRMFSSAG 641
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQIN 584
++ Q+ + SW ++N
Sbjct: 642 MEDEEMLKVVQLSNLAM------SWKKLN 664
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 222/510 (43%), Gaps = 95/510 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + A +F+ M RD ++W+ M+ G K+G + A +F+ MPER++ ++ ++I
Sbjct: 175 LRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIR 234
Query: 61 GL---------------MQSDNVQ--------------GAKEVFDGMEVR---------- 81
G M+ + VQ A +G+++
Sbjct: 235 GYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFEL 294
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
D+ +S+I Y G + +A R F M KD+VSWN +I V ++ A FK M
Sbjct: 295 DIFLGDSIIIMYSRFGCMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMH 354
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+D SWT MV G G + E+ +LF++MP KD AW +I+ ++ NG
Sbjct: 355 QKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITNG----------- 403
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEK---TWNSIISVLIRNGLV--- 254
D S A+ +F +M E C+ ++ ++S L ++
Sbjct: 404 ----DYLS----------------AVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQG 443
Query: 255 KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
++AH+Y + + A T+++ Y + G + A VF ++ + N MI ++
Sbjct: 444 RQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQH 503
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG-------RQIHAQAIKIAR 366
E+ LK F +M+ +G P++ TF +LT C+ + G R ++ ++
Sbjct: 504 GFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVY--GVEPNP 561
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII-SWNSIICGLAYHGYAEKALELFE 425
+T M+ + R G + AL +S+P +D +W +++ + H + A
Sbjct: 562 EHYT----CMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLH--SNLAFAKIA 615
Query: 426 RMRLTDFKPDDITFVGVLSAC-SYAGLVDQ 454
+L + P D T VLS S AG+ D+
Sbjct: 616 AQKLLEKDPYDATAYTVLSRMFSSAGMEDE 645
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 134/347 (38%), Gaps = 42/347 (12%)
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE-NDLGEEGLKFFVQMKESGPSP 333
++ Y G + A +F+ M +RDV W ++ + DL L F + + PS
Sbjct: 44 LLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAPS- 102
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLE 392
NA + L L ++ A+ VS A+I+ A+ + A L
Sbjct: 103 WNALLSVYLRAARPRAAHALFYKMPAK---------NAVSYGAIISGLAKAEMLHEAELV 153
Query: 393 FSSVPIH--DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
+ +P D + N+++ G G AL +FE M + D I++ ++ G
Sbjct: 154 YEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDV----ISWSAMVDGLCKHG 209
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
V + R FD M + + +T ++ + G+ + + L +R +G++V+ T
Sbjct: 210 SVSEARRVFDAMPERNVVS-----WTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTL 264
Query: 511 GALLGACR----IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
L AC I++ + EL+ +I MY G DAKR F
Sbjct: 265 SVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIII---MYSRFGCMVDAKRAFDC 321
Query: 567 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
M++ + SW + ++G H L L+H +
Sbjct: 322 MQQKDI-----VSW-------NSLITGYVQHDMVEEAHVLFKLMHQK 356
>gi|125602089|gb|EAZ41414.1| hypothetical protein OsJ_25936 [Oryza sativa Japonica Group]
Length = 1165
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/629 (28%), Positives = 321/629 (51%), Gaps = 60/629 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R+++AQ LFD+MP RD ++W ++ Y G L +A +F+ MP R+ ++N +++
Sbjct: 50 RRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAPSWNALLSV 109
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL--KDVVSWNL 119
+++ + A +F M ++ V++ ++ISG ++ EA V+ MP +D V N
Sbjct: 110 YLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELVYEEMPWQWRDPVGSNA 169
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++ + + +A F+ M RDV SW+ MV+GL + G + EAR++FD MP ++V +W
Sbjct: 170 LMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSW 229
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA-------------- 225
MI GY+ G LF M + +N S +DA
Sbjct: 230 TSMIRGYVKRGMCRDGLLLFLNMRREGVQ-----VNTTTLSVALDACAAASLAREGIQIH 284
Query: 226 ------------------------------AISYFKQMPETCEKTWNSIISVLIRNGLVK 255
A F M + +WNS+I+ +++ +V+
Sbjct: 285 NLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVE 344
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
EAH + + SWT+++VG+ G + ++++FE M +D W +I N
Sbjct: 345 EAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITNGD 404
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
+++F +M + G P+ F+ +L+ + L L+ GRQ HA +I + + V +
Sbjct: 405 YLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVHTS 464
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
+++MYA+CG + A FSS+ +I+ NS+I HG+ E AL+LF +M+ +KP+
Sbjct: 465 LVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPN 524
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
+TF+G+L+ C+ AG V QG YF+ M+ Y ++P HYTC+VDLLGR GL+ EA+ ++
Sbjct: 525 HVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMI 584
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
N + + W ALL A +H+N+ +IA ++++E +P ++ Y +L+ M+ S G
Sbjct: 585 NSMPQND---HSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVLSRMFSSAG 641
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQIN 584
++ Q+ + SW ++N
Sbjct: 642 MEDEEMLKVVQLSNLAM------SWKKLN 664
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 222/510 (43%), Gaps = 95/510 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + A +F+ M RD ++W+ M+ G K+G + A +F+ MPER++ ++ ++I
Sbjct: 175 LRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIR 234
Query: 61 GL---------------MQSDNVQ--------------GAKEVFDGMEVR---------- 81
G M+ + VQ A +G+++
Sbjct: 235 GYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFEL 294
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
D+ +S+I Y G + +A R F M KD+VSWN +I V ++ A FK M
Sbjct: 295 DIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMH 354
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+D SWT MV G G + E+ +LF++MP KD AW +I+ ++ NG
Sbjct: 355 QKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITNG----------- 403
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEK---TWNSIISVLIRNGLV--- 254
D S A+ +F +M E C+ ++ ++S L ++
Sbjct: 404 ----DYLS----------------AVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQG 443
Query: 255 KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
++AH+Y + + A T+++ Y + G + A VF ++ + N MI ++
Sbjct: 444 RQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQH 503
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG-------RQIHAQAIKIAR 366
E+ LK F +M+ +G P++ TF +LT C+ + G R ++ ++
Sbjct: 504 GFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVY--GVEPNP 561
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII-SWNSIICGLAYHGYAEKALELFE 425
+T M+ + R G + AL +S+P +D +W +++ + H + A
Sbjct: 562 EHYT----CMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLH--SNLAFAKIA 615
Query: 426 RMRLTDFKPDDITFVGVLSAC-SYAGLVDQ 454
+L + P D T VLS S AG+ D+
Sbjct: 616 AQKLLEKDPYDATAYTVLSRMFSSAGMEDE 645
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 134/347 (38%), Gaps = 42/347 (12%)
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE-NDLGEEGLKFFVQMKESGPSP 333
++ Y G + A +F+ M +RDV W ++ + DL L F + + PS
Sbjct: 44 LLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAPS- 102
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLE 392
NA + L L ++ A+ VS A+I+ A+ + A L
Sbjct: 103 WNALLSVYLRAARPRAAHALFYKMPAK---------NAVSYGAIISGLAKAEMLHEAELV 153
Query: 393 FSSVPIH--DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
+ +P D + N+++ G G AL +FE M + D I++ ++ G
Sbjct: 154 YEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDV----ISWSAMVDGLCKHG 209
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
V + R FD M + + +T ++ + G+ + + L +R +G++V+ T
Sbjct: 210 SVSEARRVFDAMPERNVVS-----WTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTL 264
Query: 511 GALLGACR----IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
L AC I++ + EL+ +I MY G DAKR F
Sbjct: 265 SVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIII---MYSRFGWMVDAKRAFDC 321
Query: 567 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
M++ + SW + ++G H L L+H +
Sbjct: 322 MQQKDI-----VSW-------NSLITGYVQHDMVEEAHVLFKLMHQK 356
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/572 (31%), Positives = 326/572 (56%), Gaps = 27/572 (4%)
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVI 121
D + A VF+ ++ +++ WN+M G+ + AL+++ M L + ++ ++
Sbjct: 82 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLL 141
Query: 122 GALVNCQRMDLAES---YFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
+ + + + ++G D+ T +++ V+ GR+ +ARK+FD+ P +DV
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVV 201
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
++ +I GY G + A+ LF ++ +D+ SW +I+G + A+ FK+M +T
Sbjct: 202 SYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTN 261
Query: 238 ----EKTWNSIISVLIRNG---LVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAI 289
E T +++S ++G L ++ HS+++ + + SN+ +++ Y + GE+ +A
Sbjct: 262 IRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETAC 321
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
+FE + +DV WN +I G +L +E L F +M SG P++ T S+L C+ L
Sbjct: 322 GLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLG 381
Query: 350 TLDLGRQIHA---QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
+D+GR IH + +K A N +++ ++I MYA+CG+I++A F+S+ + SWN+
Sbjct: 382 AIDIGRWIHVYIDKRLKSATNA-SSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
+I G A HG A+ A ++F RMR +PDDITFVG+LSACS +G++D GR+ F M Y
Sbjct: 441 MIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDY 500
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLN--EIRADGIEVSPTVWGALLGACRIHNNIK 524
+ P+ HY C++DLLG GL EA ++N E+ DG+ +W +LL AC+I N++
Sbjct: 501 KITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGV-----IWCSLLKACKIRGNVE 555
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIN 584
+GE + ++++EP N G Y++L+ +Y + GR + +I A + + G+KK PGCS I+I+
Sbjct: 556 LGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEID 615
Query: 585 DGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
H F+ GD HP+ + +L + +E+
Sbjct: 616 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 647
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 130/543 (23%), Positives = 245/543 (45%), Gaps = 71/543 (13%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D+F + ++I+ +Q+ ++ A++VFD RDVV++ ++I GY G I+ A ++F +P
Sbjct: 168 DLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIP 227
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNGLVREGRIVEARK 166
+KDVVSWN +I A FKEM ++ ++ +V+ + G I R+
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 167 LF----DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ D +++ N ++ Y G + A LF+ + +D+ SW LI G +
Sbjct: 288 VHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNL 347
Query: 223 IDAAISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEKYPYS--NIASW- 272
A+ F++M + E+ T SI+ G + + H Y++K S N +S
Sbjct: 348 YKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLR 407
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T++I Y + G++ +A +VF + + ++ WN MIFG + + F +M++ G
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIE 467
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD+ TF +L+ CS LDLGR I F T++ +
Sbjct: 468 PDDITFVGLLSACSRSGMLDLGRHI-----------FRTMTQ-----------------D 499
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
+ P + + +I L + G ++A E+ M + +PD + + +L AC G V
Sbjct: 500 YKITP--KLEHYGCMIDLLGHSGLFKEAEEMINNMEM---EPDGVIWCSLLKACKIRGNV 554
Query: 453 DQGRYYFDCMKNKYFLQPRSAH-YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
+ G + +N ++P + Y + ++ G +E + + G++ P
Sbjct: 555 ELGESF---AQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVP---- 607
Query: 512 ALLGACRIHNNIKVGEIAGERVM--ELEPNNSGVYLILTEMYL---SCGRREDAKRIFAQ 566
C ++I++ + E ++ + P N +Y +L EM + G D + +
Sbjct: 608 ----GC---SSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQE 660
Query: 567 MKE 569
M+E
Sbjct: 661 MEE 663
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 150/346 (43%), Gaps = 89/346 (25%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N R+++A+ +FD+ P RD V++ +I+GY G++++A LF+++P +D+ ++N +I+
Sbjct: 180 VQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMIS 239
Query: 61 GLMQSDNVQGAKEVFDGMEV--------------------------RDVVTW-------- 86
G ++ N + A E+F M R V +W
Sbjct: 240 GYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGS 299
Query: 87 -----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
NS++ Y G ++ A +F G+ KDV+SWN +IG + A F+EM
Sbjct: 300 NLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEML 359
Query: 141 ---------------------GARDVASW-------------------TIMVNGLVREGR 160
GA D+ W T +++ + G
Sbjct: 360 RSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGD 419
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLING 216
I A ++F+ + K + +WN MI G+ +G A D+F +M + D ++ L++
Sbjct: 420 IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSA 479
Query: 217 LVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVKEA 257
S +D F+ M + + T + +I +L +GL KEA
Sbjct: 480 CSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEA 525
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 209/635 (32%), Positives = 326/635 (51%), Gaps = 29/635 (4%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLM 63
EA+ FD + + VTWN +I GY + G + A LF QM + M T+ V+
Sbjct: 114 EARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACS 173
Query: 64 QSDNVQGAKE----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
++ KE V V D +++S YV G +D A +VF G+ +DV ++N+
Sbjct: 174 SPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNV 233
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVRE-----GRIVEARKLFDK 170
+IG + A F M S+ +++G G+ V A+ +
Sbjct: 234 MIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTG 293
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
+ DV+ +I Y+ G + A +F KM RD+ SW +I G + I+ A F
Sbjct: 294 L-VDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLF 352
Query: 231 KQMPETCEK----TWNSIISVLIRNG---LVKEAHSYLEKYPY-SNIASWTNVIVGYFEM 282
M E + T+ II+ + L +E HS + + + +++ T ++ Y +
Sbjct: 353 ATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKC 412
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G + A +VF+ M+ RDV W+ MI EN GEE + F MK + PD T+ ++L
Sbjct: 413 GAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLL 472
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
C L LDLG +I+ QAIK V NA+I M + G+I+ A F ++ D++
Sbjct: 473 NACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVV 532
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
+WN +I G + HG A +AL+LF+RM F+P+ +TFVGVLSACS AG V++GR +F +
Sbjct: 533 TWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYL 592
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
+ + P Y C+VDLLGR G +DEA L+N + ++ + ++W LL ACRI+ N
Sbjct: 593 LDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMP---LKPNSSIWSTLLAACRIYGN 649
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
+ V E A ER + EP + VY+ L+ MY + G E+ ++ M+ GV+KE GC+WI+
Sbjct: 650 LDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIE 709
Query: 583 INDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
+ H F+ D SHP+ + L L T I+RE
Sbjct: 710 VEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKRE 744
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 246/531 (46%), Gaps = 47/531 (8%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
+++ NT+I N+ A++ FD +E + VVTWN++I+GY G + EA +F M
Sbjct: 95 NIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMV 154
Query: 111 LK----DVVSWNLVIGALVNCQRMDLAESYFKEM----GARDVASWTIMVNGLVREGRIV 162
+ ++++ +V+ A + + L + + ++ D T +V+ V+ G +
Sbjct: 155 DEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMD 214
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
AR++FD + +DV +N+MI GY +G A LF +M + +++
Sbjct: 215 GARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCS 274
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
A+++ K + C T GLV ++ T +I Y
Sbjct: 275 TPEALAWGKAVHAQCMNT-----------GLV------------DDVRVATALIRMYMGC 311
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G + A +VF+ M RDV W VMI G EN E+ F M+E G PD T+ ++
Sbjct: 312 GSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHII 371
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
C+ L L R+IH+Q ++ V A++ MYA+CG I+ A F ++ D++
Sbjct: 372 NACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVV 431
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-RYYFDC 461
SW+++I +G E+A E F M+ + +PD +T++ +L+AC + G +D G Y
Sbjct: 432 SWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQA 491
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
+K L ++++ + G I+ A + + ++ W ++G +H
Sbjct: 492 IKAD--LVSHIPVGNALINMNVKHGSIERARYIFENM----VQRDVVTWNVMIGGYSLHG 545
Query: 522 NIKVGEIAGERVME--LEPNNSGVYLILTEMYLSCGRR---EDAKRIFAQM 567
N + +R+++ PN+ +L+ +C R E+ +R F+ +
Sbjct: 546 NAREALDLFDRMLKERFRPNSVTFVGVLS----ACSRAGFVEEGRRFFSYL 592
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 209/488 (42%), Gaps = 88/488 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER---- 50
++ + A+ +FD + +RD T+NVMI GY K+G + A LF +M P R
Sbjct: 208 VKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFL 267
Query: 51 -----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
D+ +I M +++GA+ VFD M+VR
Sbjct: 268 SILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVR 327
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYF 137
DVV+W MI GY N I++A +F M + D +++ +I A + + LA
Sbjct: 328 DVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIH 387
Query: 138 KEMG----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
++ D+ T +V+ + G I +AR++FD M +DV +W+ MI Y++NGC
Sbjct: 388 SQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGC-- 445
Query: 194 VAEDLFQKMH-------DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIIS 246
E+ F+ H + D+ ++ L+N + +D + + Q
Sbjct: 446 -GEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQA------------- 491
Query: 247 VLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVM 306
I+ LV P N NV + G + A +FE M RDV WNVM
Sbjct: 492 --IKADLVSH-------IPVGNALINMNV-----KHGSIERARYIFENMVQRDVVTWNVM 537
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
I G + E L F +M + P++ TF VL+ CS ++ GR+ + + R
Sbjct: 538 IGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLD-GR 596
Query: 367 NQFTTVS--NAMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALEL 423
T+ M+ + R G + A L + +P+ S W++++ +G + A
Sbjct: 597 GIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERA 656
Query: 424 FERMRLTD 431
ER +++
Sbjct: 657 AERCLMSE 664
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 116/277 (41%), Gaps = 35/277 (12%)
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
++ E D+ T+ + C L LG+Q+ I+ R N +I +++ CG
Sbjct: 51 RLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICG 110
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
N+ A F SV +++WN+II G A G+ ++A LF +M +P ITF+ VL
Sbjct: 111 NMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLD 170
Query: 445 ACSY-AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID-------------- 489
ACS AGL ++ +K + R T +V + + G +D
Sbjct: 171 ACSSPAGLKLGKEFHAQVIKVGFVSDFRIG--TALVSMYVKGGSMDGARQVFDGLYKRDV 228
Query: 490 -----------------EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
+A L ++ +G + + + ++L C + G+ +
Sbjct: 229 STFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQ 288
Query: 533 VMELE-PNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
M ++ V L MY+ CG E A+R+F +MK
Sbjct: 289 CMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMK 325
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 207/705 (29%), Positives = 337/705 (47%), Gaps = 99/705 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFK-NGFLDNAMCLFNQMPERDMFTYNTVIA 60
+ + +A+ LFD+MP+RD +WN ++ GYF+ FLD + D
Sbjct: 83 KQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFC 142
Query: 61 GLMQSDNVQGAKEV----------FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
+M+S G +E+ FD DV T +++ +V G +D A R+F +
Sbjct: 143 CVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVET--ALVDMFVRCGYVDFASRLFSQIE 200
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEA------ 164
+ N ++ +D A YF++M RDV SW +M+ L + GR+ EA
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 260
Query: 165 ---------------------------------RKLFDKMPAKDVQAWNLMIAGYLDNGC 191
K+ +P D + +I Y G
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320
Query: 192 VGVAEDLFQKMHDRDLTSWKQLING------------LVNSRRID-AAISYF-------- 230
A+ +F + DR+ SW LI G L N R + AI F
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380
Query: 231 ----------KQMPETCEKTW--------NSIISVLIRNGLVKEAHSYLEKYPYSNIASW 272
+Q+ C K+ NS+IS+ + G ++ A +I SW
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGP 331
T++I Y ++G + A + F+ M TR+ WN M+ ++ E+GLK + M +
Sbjct: 441 TSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
+PD T+ ++ C+D+ LG QI +K +V+NA ITMY++CG I A
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 560
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F + D++SWN++I G + HG ++A + F+ M KPD I++V VLS CS++GL
Sbjct: 561 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGL 620
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT--V 509
V +G+ YFD M + + P H++C+VDLLGR G + EA +L+ D + + PT V
Sbjct: 621 VQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLI-----DKMPMKPTAEV 675
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
WGALL AC+IH N ++ E+A + V EL+ +SG Y++L ++Y G+ +D+ ++ M++
Sbjct: 676 WGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRD 735
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
G+KK PG SW+++ + HVF + D SHP+ +R ++ L +I
Sbjct: 736 KGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKI 780
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 144/566 (25%), Positives = 249/566 (43%), Gaps = 72/566 (12%)
Query: 25 NVMIRGYFKNGFLDNAMCLFN-QMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDV 83
N ++ Y G L +A L + E ++ T+N ++ G + ++ A+E+FD M RDV
Sbjct: 43 NTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV 102
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
+WN+++SGY +A R G L+ VS + +L N +G R
Sbjct: 103 ASWNTLMSGYF------QARRFLDG--LETFVSMHRSGDSLPNAFTFCCVMKSCGALGCR 154
Query: 144 DVAS------W-----------TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
++A W T +V+ VR G + A +LF ++ + N M+AGY
Sbjct: 155 ELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGY 214
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWN 242
+ A + F+ M +RD+ SW +I L S R+ A+ +M + T+
Sbjct: 215 AKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYT 274
Query: 243 SIISVLIR---NGLVKEAHS-YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
S ++ R G K+ H+ + P + + +I Y + G A +VF + R
Sbjct: 275 SSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR 334
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
+ W V+I G + + + ++ F QM+ + D ++++ C + L LGRQ+H
Sbjct: 335 NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLH 394
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
+ +K N+ VSN++I++YA+CG++Q+A FSS+ DI+SW S+I + G
Sbjct: 395 SLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNII 454
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
KA E F+ M + IT+ +L A G + G + M ++ + P Y +
Sbjct: 455 KAREFFDGMA----TRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 510
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
G D N L D I I + +K G I + +
Sbjct: 511 FR-----GCADIGANKL----GDQI---------------IGHTVKAGLI-----LNVSV 541
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIF 564
N+ + MY CGR +A+++F
Sbjct: 542 ANAAI-----TMYSKCGRISEAQKLF 562
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 189/570 (33%), Positives = 297/570 (52%), Gaps = 42/570 (7%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
A+ +FD + V + M+ Y N + EA+ +F +P KDVVSWN +I ++C +
Sbjct: 74 ARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDI 133
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA--KDVQAWNLMIAGYLD 188
A F EM R V SWT +V+GL+R G + EA LF M +DV AWN MI GY
Sbjct: 134 VTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDVAAWNAMIHGYCS 193
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL 248
NG V A LF +M RD+ SW +I GL ++ + + A+ F+ M + V
Sbjct: 194 NGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVAS---------GVC 244
Query: 249 IRNGLVKEAHSYLEKYP-----------YSNIASW-------TNVIVGYFEMGEVGSAIK 290
+ +G++ S K P + W +++ Y ++ +A +
Sbjct: 245 LSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACR 304
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
VF + + V +W ++ G G ND E L+ F +M P+ ++FTS L C L
Sbjct: 305 VFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLED 364
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
++ G+ IHA A+K+ V +++ MY++CG + A+ F + +++SWNS+I G
Sbjct: 365 IERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVG 424
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
A HG AL LF +M PD IT G+LSACS++G++ + R +F +YF Q
Sbjct: 425 CAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFF-----RYFGQK 479
Query: 471 RSA-----HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKV 525
RS HYT +VD+LGR G ++EA ++ + ++ + VW ALL ACR H+N+ +
Sbjct: 480 RSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSM---PMKANSMVWLALLSACRKHSNLDL 536
Query: 526 GEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
+ A ++ E+EP+ S Y++L+ +Y S R + I +MK NGV K+PG SW+ +
Sbjct: 537 AKRAANQIFEIEPDCSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKG 596
Query: 586 GGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
H FLS D SHP ++ L L +++
Sbjct: 597 QKHKFLSADRSHPLAEKIYQKLEWLGVKLK 626
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 131/328 (39%), Gaps = 65/328 (19%)
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
EAR +FD++P V + +M+ Y N R
Sbjct: 73 EARAIFDQIPTPHVSLYTIMLHAYAQN-------------------------------HR 101
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNV------- 275
+ AI F+++P +WNSII + G + A ++ P + SWT +
Sbjct: 102 LREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRL 161
Query: 276 --------------------------IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
I GY G V A+++F M +RDV W+ MI G
Sbjct: 162 GIVQEAETLFWAMEPMDRDVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAG 221
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
L N E+ L F M SG + L+ + +P +G QIH K+ F
Sbjct: 222 LDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHF 281
Query: 370 TT-VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
VS +++T YA C +++A F V ++ W +++ G + +ALE+F M
Sbjct: 282 DEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMM 341
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGR 456
D P++ +F L++C +++G+
Sbjct: 342 RIDVVPNESSFTSALNSCCGLEDIERGK 369
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 20/180 (11%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYN-T 57
+++ A +F ++ + V W ++ GY N A+ +F +M P FT
Sbjct: 298 QMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALN 357
Query: 58 VIAGL--MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
GL ++ V A V G+E V S++ Y G + +A+ VF G+ K+VV
Sbjct: 358 SCCGLEDIERGKVIHAAAVKMGLESGGYVG-GSLVVMYSKCGYVSDAVYVFKGINEKNVV 416
Query: 116 SWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLF 168
SWN VI V C + A + F +M V I V GL+ G + +AR F
Sbjct: 417 SWNSVI---VGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFF 473
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
+ +A +F + +++ V+WN +I G ++G A+ LFNQM + D T +++
Sbjct: 400 VSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSA 459
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVT-----WNSMISGYVCNGLIDEALRVFHGMPLK-DVV 115
S +Q A+ F + VT + SM+ G ++EA V MP+K + +
Sbjct: 460 CSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSM 519
Query: 116 SWNLVIGALVNCQRMDLAE 134
W ++ A +DLA+
Sbjct: 520 VWLALLSACRKHSNLDLAK 538
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 208/705 (29%), Positives = 337/705 (47%), Gaps = 99/705 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFK-NGFLDNAMCLFNQMPERDMFTYNTVIA 60
+ + +A+ LFD+MP+RD +WN ++ GYF+ FLD + D
Sbjct: 83 KQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFC 142
Query: 61 GLMQSDNVQGAKEV----------FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
+M+S G +E+ FD DV T +++ +V G +D A R+F +
Sbjct: 143 CVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVET--ALVDMFVRCGYVDFASRLFSQIE 200
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEA------ 164
+ N ++ +D A YF++M RDV SW +M+ L + GR+ EA
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 260
Query: 165 ---------------------------------RKLFDKMPAKDVQAWNLMIAGYLDNGC 191
K+ +P D + +I Y G
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGS 320
Query: 192 VGVAEDLFQKMHDRDLTSWKQLING------------LVNSRRID-AAISYF-------- 230
A+ +F + DR+ SW LI G L N R + AI F
Sbjct: 321 FKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISG 380
Query: 231 ----------KQMPETCEKTW--------NSIISVLIRNGLVKEAHSYLEKYPYSNIASW 272
+Q+ C K+ NS+IS+ + G ++ A +I SW
Sbjct: 381 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGP 331
T++I Y ++G + A + F+ M TR+ WN M+ ++ E+GLK + M +
Sbjct: 441 TSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
+PD T+ ++ C+D+ LG QI +K +V+NA ITMY++CG I A
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 560
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F + D++SWN++I G + HG ++A + F+ M KPD I++V VLS CS++GL
Sbjct: 561 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGL 620
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT--V 509
V +G+ YFD M + + P H++C+VDLLGR G + EA +L+ D + + PT V
Sbjct: 621 VQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLI-----DKMPMKPTAEV 675
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
WGALL AC+IH N ++ E+A + V EL+ +SG Y++L ++Y G+ +D+ ++ M++
Sbjct: 676 WGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRD 735
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
G+KK PG SW+++ + HVF + D SHP+ +R L+ L +I
Sbjct: 736 KGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKI 780
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 145/566 (25%), Positives = 250/566 (44%), Gaps = 72/566 (12%)
Query: 25 NVMIRGYFKNGFLDNAMCLFN-QMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDV 83
N ++ YF G L +A L + E ++ T+N ++ G + ++ A+E+FD M RDV
Sbjct: 43 NTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV 102
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
+WN+++SGY +A R G L+ VS + +L N +G R
Sbjct: 103 ASWNTLMSGYF------QARRFLDG--LETFVSMHRSGDSLPNAFTFCCVMKSCGALGCR 154
Query: 144 DVAS------W-----------TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
++A W T +V+ VR G + A +LF ++ + N M+AGY
Sbjct: 155 ELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGY 214
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWN 242
+ A + F+ M +RD+ SW +I L S R+ A+ +M + T+
Sbjct: 215 AKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYT 274
Query: 243 SIISVLIR---NGLVKEAHS-YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
S ++ R G K+ H+ + P + + +I Y + G A +VF + R
Sbjct: 275 SSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR 334
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
+ W V+I G + + + ++ F QM+ + D ++++ C + L LGRQ+H
Sbjct: 335 NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLH 394
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
+ +K N+ VSN++I++YA+CG++Q+A FSS+ DI+SW S+I + G
Sbjct: 395 SLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNII 454
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
KA E F+ M + IT+ +L A G + G + M ++ + P Y +
Sbjct: 455 KAREFFDGMD----TRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 510
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
G D N L D I I + +K G I + +
Sbjct: 511 FR-----GCADIGANKL----GDQI---------------IGHTVKAGLI-----LNVSV 541
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIF 564
N+ + MY CGR +A+++F
Sbjct: 542 ANAAI-----TMYSKCGRISEAQKLF 562
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 201/646 (31%), Positives = 340/646 (52%), Gaps = 39/646 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
N I++A+ LFDKMP +D V WNVM+ G+ K G ++A+ +F M + + T+ +
Sbjct: 19 ENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFAS 78
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V++ + S+ + G+ + D + N++++ Y G + +AL++F+ MP
Sbjct: 79 VLS-ICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDT 137
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV---------REGRIVE 163
+VV+WN +I V MD A F EM + V+ +I + ++G+ +
Sbjct: 138 NVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIH 197
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
L + A DV + +I Y VG+A +F++ + D+ +I+G V +
Sbjct: 198 GYILRHGI-ALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLN 256
Query: 224 DAAISYFKQMPETCEKTWNSIISV---------LIRNGLVKEAHSYLEKYPYSNIASWTN 274
+ A+ F+ + E EK + +++ L L KE H+ + K+ +
Sbjct: 257 NDALEIFRWLLE--EKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGS 314
Query: 275 VIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
I+ Y + G + A ++F M +D WN +I +N +E + F QM G S
Sbjct: 315 AIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSY 374
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D + ++ L+ C++LP L G+ IH+ IK A + +A+I MY +CGN+ A F
Sbjct: 375 DCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVF 434
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ + +SWNSII HG+ E +L LF +M +PD +TF+ +LSAC +AG VD
Sbjct: 435 DMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVD 494
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT--VWG 511
+G YF CM +Y + R HY C+VDL GR G ++EA + + SP VWG
Sbjct: 495 KGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKN-----MPFSPDDGVWG 549
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
LLGACR+H N+++ E+A +++L+P NSG Y++L+ ++ G+ ++I + MK+ G
Sbjct: 550 TLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRG 609
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
V+K PG SWI++N H+F++ D SHP+ ++ +LN L E+ +E
Sbjct: 610 VQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKE 655
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 147/328 (44%), Gaps = 31/328 (9%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+++I Y E G + A ++F+ M +D +WNVM+ G + +K F M+
Sbjct: 11 SSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTK 70
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P++ TF SVL+IC+ + G Q+H I + V+NA++ MY++ G + AL
Sbjct: 71 PNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKL 130
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F+++P ++++WN +I G +G+ ++A LF M PD ITF L + + + +
Sbjct: 131 FNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASL 190
Query: 453 DQGR-----------------------YYFDC----MKNKYFLQPRSAHYTCVVDLLGRF 485
QG+ YF C M K F Q + ++ +
Sbjct: 191 KQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGY 250
Query: 486 ---GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNS 541
GL ++A+ + + + + + ++L AC + +G E+ +
Sbjct: 251 VLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERR 310
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKE 569
V + +MY CGR + A +IF +M E
Sbjct: 311 HVGSAIMDMYAKCGRLDLAYQIFRRMPE 338
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
V +++I +YA G I+ A F +P D + WN ++ G G A+++FE MR
Sbjct: 9 VGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQ 68
Query: 432 FKPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
KP+ ITF VLS C+ L + G + + + + P A+ +V + +FG + +
Sbjct: 69 TKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVAN--ALVAMYSKFGQLSD 126
Query: 491 AMNLLNEI 498
A+ L N +
Sbjct: 127 ALKLFNTM 134
>gi|302784086|ref|XP_002973815.1| hypothetical protein SELMODRAFT_100620 [Selaginella moellendorffii]
gi|300158147|gb|EFJ24770.1| hypothetical protein SELMODRAFT_100620 [Selaginella moellendorffii]
Length = 564
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/551 (29%), Positives = 286/551 (51%), Gaps = 6/551 (1%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ +A+ FD++ + +WN++I Y +NG + A F++MP R T+NT++ ++
Sbjct: 8 LDDARTAFDRLAHPNAFSWNILILAYAQNGQIPLARDAFDRMPARTSVTWNTLLTAYARA 67
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
++ ++ +F M R +VTWNS++ Y NGL+ A +F MP + SWN++I V
Sbjct: 68 GHMPESELLFKNMPERGIVTWNSIVEAYAHNGLLARAKTLFDAMPERTAYSWNIMIQGYV 127
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
+ R A + F+ M R ASW ++ GLV G + EA ++F+ P +D+ A N M++
Sbjct: 128 DNSRFQSALAAFERMPQRSTASWNTVLAGLVAAGHLREAERVFEATPHRDLHAHNTMVSA 187
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
Y G + A D+F K+ R+ W L+ V + ++ A + F P +WN+++
Sbjct: 188 YCKAGALHRARDVFDKVPHRNFVCWNALLQAYVQNGQLSTAKATFDVSPCRDVASWNAMM 247
Query: 246 SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV 305
G +++A ++ P ++ S T ++V Y G + A +F+ + RD WN
Sbjct: 248 QGFAEEGQLQDAELLFQRMPKRDVVSATALVVAYARHGHITQARALFDGLPVRDTIAWNA 307
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
MI + L + L F M D+A+ +S L C+ L L G+ IH+ +
Sbjct: 308 MIAAYTQAGLALDALNLFKVMDLEAVPLDHASLSSALDACATLAALREGKLIHSSILHSE 367
Query: 366 R-NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+ T V+ ++ITMYARC + A F + D+ WN+++ + +G +++LE+F
Sbjct: 368 LFHSNTIVATSLITMYARCARLCEAKRAFDGLTKRDVPCWNTMVAAYSQNGLFQESLEIF 427
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK--NKYFLQPRSAHYTCVVDLL 482
M + KP +F+ +L++CS+ GL+ + +YF ++ + + P HY C++DLL
Sbjct: 428 RTMEVEGHKPQSASFICILTSCSHGGLLTEALWYFTALQLVEDHGVVPTVDHYICIIDLL 487
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
R G + +A LLN + E W ALLG C+ N+++ G + V +L+P
Sbjct: 488 ARIGWLHQAEELLNTM---PFEPDSVAWMALLGGCKGQNDVQTGARVAKHVFQLQPRTPA 544
Query: 543 VYLILTEMYLS 553
+Y++L+ + S
Sbjct: 545 LYVLLSNTHAS 555
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 203/459 (44%), Gaps = 16/459 (3%)
Query: 93 YVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV 152
Y G +D+A F + + SWN++I A ++ LA F M AR +W ++
Sbjct: 2 YGACGSLDDARTAFDRLAHPNAFSWNILILAYAQNGQIPLARDAFDRMPARTSVTWNTLL 61
Query: 153 NGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
R G + E+ LF MP + + WN ++ Y NG + A+ LF M +R SW
Sbjct: 62 TAYARAGHMPESELLFKNMPERGIVTWNSIVEAYAHNGLLARAKTLFDAMPERTAYSWNI 121
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW 272
+I G V++ R +A++ F++MP+ +WN++++ L+ G ++EA E P+ ++ +
Sbjct: 122 MIQGYVDNSRFQSALAAFERMPQRSTASWNTVLAGLVAAGHLREAERVFEATPHRDLHAH 181
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
++ Y + G + A VF+ + R+ WN ++ +N F + P
Sbjct: 182 NTMVSAYCKAGALHRARDVFDKVPHRNFVCWNALLQAYVQNGQLSTAKATF----DVSPC 237
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
D A++ +++ ++ L + + K + + A++ YAR G+I A
Sbjct: 238 RDVASWNAMMQGFAEEGQLQDAELLFQRMPK----RDVVSATALVVAYARHGHITQARAL 293
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F +P+ D I+WN++I G A AL LF+ M L D + L AC+ +
Sbjct: 294 FDGLPVRDTIAWNAMIAAYTQAGLALDALNLFKVMDLEAVPLDHASLSSALDACATLAAL 353
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+G+ + + + T ++ + R + EA + + + W
Sbjct: 354 REGKLIHSSILHSELFHSNTIVATSLITMYARCARLCEAKRAFDGLTKRDVP----CWNT 409
Query: 513 LLGACRIHNNIKVGEIAGERVMELE---PNNSGVYLILT 548
++ A N + + R ME+E P ++ ILT
Sbjct: 410 MVAAYS-QNGLFQESLEIFRTMEVEGHKPQSASFICILT 447
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 185/424 (43%), Gaps = 35/424 (8%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G + +AR FD++ + +WN++I Y NG + +A D F +M R +W L+
Sbjct: 6 GSLDDARTAFDRLAHPNAFSWNILILAYAQNGQIPLARDAFDRMPARTSVTWNTLLTAYA 65
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+ + + FK MPE TWNSI+ NGL+ A + + P SW +I G
Sbjct: 66 RAGHMPESELLFKNMPERGIVTWNSIVEAYAHNGLLARAKTLFDAMPERTAYSWNIMIQG 125
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD-NAT 337
Y + SA+ FE M R WN ++ GL E + F E+ P D +A
Sbjct: 126 YVDNSRFQSALAAFERMPQRSTASWNTVLAGLVAAGHLREAERVF----EATPHRDLHAH 181
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-------NAMITMYARCGNIQSAL 390
T V C A A+ AR+ F V NA++ Y + G + +A
Sbjct: 182 NTMVSAYCK------------AGALHRARDVFDKVPHRNFVCWNALLQAYVQNGQLSTAK 229
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F P D+ SWN+++ G A G + A LF+RM K D ++ ++ A + G
Sbjct: 230 ATFDVSPCRDVASWNAMMQGFAEEGQLQDAELLFQRMP----KRDVVSATALVVAYARHG 285
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
+ Q R FD + + + + ++ + GL +A+NL + + + +
Sbjct: 286 HITQARALFDGLPVRDTIA-----WNAMIAAYTQAGLALDALNLFKVMDLEAVPLDHASL 340
Query: 511 GALLGACRIHNNIKVGEIAGERVM--ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+ L AC ++ G++ ++ EL +N+ V L MY C R +AKR F +
Sbjct: 341 SSALDACATLAALREGKLIHSSILHSELFHSNTIVATSLITMYARCARLCEAKRAFDGLT 400
Query: 569 ENGV 572
+ V
Sbjct: 401 KRDV 404
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 148/312 (47%), Gaps = 21/312 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N ++ A+ FD P RD +WN M++G+ + G L +A LF +MP+RD+ + ++
Sbjct: 220 VQNGQLSTAKATFDVSPCRDVASWNAMMQGFAEEGQLQDAELLFQRMPKRDVVSATALVV 279
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNL 119
+ ++ A+ +FDG+ VRD + WN+MI+ Y GL +AL +F M L+ V +
Sbjct: 280 AYARHGHITQARALFDGLPVRDTIAWNAMIAAYTQAGLALDALNLFKVMDLEAVPLDHAS 339
Query: 120 VIGALVNCQ--------RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
+ AL C ++ + E+ + T ++ R R+ EA++ FD +
Sbjct: 340 LSSALDACATLAALREGKLIHSSILHSELFHSNTIVATSLITMYARCARLCEAKRAFDGL 399
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM----HDRDLTSWKQLINGLVNSRRIDAAI 227
+DV WN M+A Y NG + ++F+ M H S+ ++ + + A+
Sbjct: 400 TKRDVPCWNTMVAAYSQNGLFQESLEIFRTMEVEGHKPQSASFICILTSCSHGGLLTEAL 459
Query: 228 SYFK--QMPE-----TCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGY 279
YF Q+ E + II +L R G + +A L P+ + +W ++ G
Sbjct: 460 WYFTALQLVEDHGVVPTVDHYICIIDLLARIGWLHQAEELLNTMPFEPDSVAWMALLGGC 519
Query: 280 FEMGEVGSAIKV 291
+V + +V
Sbjct: 520 KGQNDVQTGARV 531
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/563 (32%), Positives = 313/563 (55%), Gaps = 43/563 (7%)
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D + A VF+ ++ +++ WN+M G+ + AL ++ M + +G L
Sbjct: 51 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCM---------ISLGLLP 101
Query: 126 NCQRMD-LAESYFKEMGAR----------------DVASWTIMVNGLVREGRIVEARKLF 168
NC L +S K R D+ T +++ V+ GR+ +ARK+F
Sbjct: 102 NCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVF 161
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
D+ +DV ++ +I GY G + A+ +F ++ +D+ SW +I+G + A+
Sbjct: 162 DQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALE 221
Query: 229 YFKQMPETC----EKTWNSIISVLIRNG---LVKEAHSYLEKYPY-SNIASWTNVIVGYF 280
FK+M +T E T S++S ++ L ++ HS+++ + + SN+ +I Y
Sbjct: 222 LFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYI 281
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ GEV +A +FE ++ +DV WN +I G +L +E L F +M SG SP++ T S
Sbjct: 282 KCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLS 341
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPI 398
+L C+ L +++GR IH K + S+ ++I MYA+CG+I++A F S+
Sbjct: 342 ILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILN 401
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
+ SWN++I G A HG A A ++F RMR + +PDDITFVG+LSACS++G++D GR+
Sbjct: 402 RSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI 461
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN--EIRADGIEVSPTVWGALLGA 516
F MK Y + P+ HY C++DLLG GL EA ++N E+ DG+ +W +LL A
Sbjct: 462 FRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV-----IWCSLLKA 516
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
C+++ N+++GE + ++++EP N G Y++L+ +Y + GR + +I A + + G+KK P
Sbjct: 517 CKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVP 576
Query: 577 GCSWIQINDGGHVFLSGDSSHPK 599
GCS I+I+ H F+ GD HP+
Sbjct: 577 GCSSIEIDSVVHEFIIGDKFHPR 599
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 214/476 (44%), Gaps = 55/476 (11%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D++ + ++I+ +Q+ ++ A++VFD RDVV++ ++I+GY G I A ++F +P
Sbjct: 137 DLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIP 196
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNGLVREGRIVEARK 166
+KDVVSWN +I A FKEM +V ++ +V+ + I R+
Sbjct: 197 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ 256
Query: 167 LF----DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ D +++ N +I Y+ G V A LF+ + +D+ SW LI G +
Sbjct: 257 VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 316
Query: 223 IDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEA---HSYLEK--YPYSNIASW- 272
A+ F++M + E T SI+ G ++ H Y+ K +N +S
Sbjct: 317 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR 376
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T++I Y + G++ +A +VF+ + R ++ WN MIFG + F +M+++
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 436
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD+ TF +L+ CS LDLGR I +S +
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHI----------------------------FRSMKED 468
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
+ P + + +I L + G ++A E+ M + +PD + + +L AC V
Sbjct: 469 YKITP--KLEHYGCMIDLLGHSGLFKEAEEMINTMEM---EPDGVIWCSLLKACKMYANV 523
Query: 453 DQGRYYFDCMKNKYFLQPRS-AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
+ G Y +N ++P++ Y + ++ G +E + + G++ P
Sbjct: 524 ELGESY---AQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVP 576
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 150/346 (43%), Gaps = 89/346 (25%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N R+++A+ +FD+ RD V++ +I GY G++ +A +F+++P +D+ ++N +I+
Sbjct: 149 VQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMIS 208
Query: 61 GLMQSDNVQGAKEVFDGMEV--------------------------RDVVTW-------- 86
G ++ N + A E+F M R V +W
Sbjct: 209 GYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGS 268
Query: 87 -----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
N++I Y+ G ++ A +F G+ KDV+SWN +IG + A F+EM
Sbjct: 269 NLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEML 328
Query: 141 ---------------------GARDVASW-------------------TIMVNGLVREGR 160
GA ++ W T +++ + G
Sbjct: 329 RSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGD 388
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLING 216
I A+++FD + + + +WN MI G+ +G A D+F +M + D ++ L++
Sbjct: 389 IEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSA 448
Query: 217 LVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVKEA 257
+S +D F+ M E + T + +I +L +GL KEA
Sbjct: 449 CSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEA 494
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 13/175 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I+ AQ +FD + R +WN MI G+ +G + A +F++M + ++ + GL+ +
Sbjct: 389 IEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSA 448
Query: 66 DNVQG----AKEVFDGMEVRDVVT-----WNSMISGYVCNGLIDEALRVFHGMPLK-DVV 115
+ G + +F M+ +T + MI +GL EA + + M ++ D V
Sbjct: 449 CSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV 508
Query: 116 SWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGRIVEARKL 167
W ++ A ++L ESY + ++ ++ S+ ++ N GR E K+
Sbjct: 509 IWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKI 563
>gi|255559140|ref|XP_002520592.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540252|gb|EEF41825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 525
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 265/476 (55%), Gaps = 34/476 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP---ERDMFTYNT 57
+ N ++ EA LF KMP+RD +W +MI Y +NG L+ A L N +P ++D +N
Sbjct: 48 LHNNKVDEAYELFVKMPRRDLFSWTLMITCYTQNGMLEKAKQLLNSLPCNYKKDAACWNA 107
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+I+G + AK +F+ M V+++V+WNSM++GY NG + AL++FH M +DVVSW
Sbjct: 108 MISGYSREGRYDDAKRLFNEMPVKNIVSWNSMLAGYTQNGQMSLALQLFHEMLERDVVSW 167
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
NL++ V +D A +FK++ ++ SW M+ G R+G+++EAR+LFD+MP+K+V
Sbjct: 168 NLMVDGFVELGDLDSAWEFFKKVPEPNIVSWVTMLYGFARKGKLLEARRLFDQMPSKNVV 227
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
+WN MI+ Y+ + + AE LF++M RD SW +ING V + ++D A ++P
Sbjct: 228 SWNAMISAYVQSRQIDEAEKLFEEMPKRDSVSWTTMINGYVRAGKLDEARKTLSKLPYKN 287
Query: 238 EKTWNSIISVLIRN-------------------------------GLVKEAHSYLEKYPY 266
++IS I+ G V EA E+
Sbjct: 288 IAAQTAMISGYIKYNKIDEARQIFNEIGTPDMVCFNTMLAGYTQCGRVDEAIHLFEQMVK 347
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
+I SW ++ Y ++G++ A+KVF+ M R++ WN +I G + + + L FV M
Sbjct: 348 KDIVSWNTMVAAYAQVGQMERALKVFKEMGERNLVSWNSLISGFMLHGMYLDALWCFVLM 407
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
+ G PD +TF L+ C+ + L +GRQ+H IK V NA+ITMYA+CG I
Sbjct: 408 QHEGKKPDQSTFACALSSCAIVAALQVGRQLHHLVIKSGYINDLFVCNALITMYAKCGKI 467
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
A L F + D++SWNS+I G A +G E+AL LFE M+L PD +TF+GV
Sbjct: 468 LEAKLVFKGICNADVVSWNSLIGGYALNGCGEEALTLFEEMKLAGVVPDQVTFIGV 523
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 154/566 (27%), Positives = 268/566 (47%), Gaps = 65/566 (11%)
Query: 47 MPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF 106
M +R+ TYN++I+ ++ V A+ +FD M R++V+WN+MI+GY+ N +DEA +F
Sbjct: 1 MSQRNTVTYNSMISAYAKNGRVIDARVLFDKMPCRNLVSWNTMIAGYLHNNKVDEAYELF 60
Query: 107 HGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA---RDVASWTIMVNGLVREGRIVE 163
MP +D+ SW L+I ++ A+ + +D A W M++G REGR +
Sbjct: 61 VKMPRRDLFSWTLMITCYTQNGMLEKAKQLLNSLPCNYKKDAACWNAMISGYSREGRYDD 120
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
A++LF++MP K++ +WN M+AGY NG + +A LF +M +RD+ SW +++G V +
Sbjct: 121 AKRLFNEMPVKNIVSWNSMLAGYTQNGQMSLALQLFHEMLERDVVSWNLMVDGFVELGDL 180
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMG 283
D+A +FK++PE +W +++ R G + EA ++ P N+ SW +I Y +
Sbjct: 181 DSAWEFFKKVPEPNIVSWVTMLYGFARKGKLLEARRLFDQMPSKNVVSWNAMISAYVQSR 240
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
++ A K+FE M RD W MI G +E K ++ P + A T++++
Sbjct: 241 QIDEAEKLFEEMPKRDSVSWTTMINGYVRAGKLDEARKTLSKL----PYKNIAAQTAMIS 296
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVS----NAMITMYARCGNIQSALLEFSSVPIH 399
+D RQI N+ T N M+ Y +CG + A+ F +
Sbjct: 297 GYIKYNKIDEARQIF--------NEIGTPDMVCFNTMLAGYTQCGRVDEAIHLFEQMVKK 348
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
DI+SWN+++ A G E+AL++F+ M + +++ ++S G + G Y
Sbjct: 349 DIVSWNTMVAAYAQVGQMERALKVFKEMGERNL----VSWNSLIS-----GFMLHGMY-- 397
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
+D L F L+ +G + + + L +C I
Sbjct: 398 -------------------LDALWCFVLMQH----------EGKKPDQSTFACALSSCAI 428
Query: 520 HNNIKVGEIAGERVMEL-EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
++VG V++ N+ V L MY CG+ +AK +F G+
Sbjct: 429 VAALQVGRQLHHLVIKSGYINDLFVCNALITMYAKCGKILEAKLVF-----KGICNADVV 483
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLR 604
SW + G + G+ + F ++
Sbjct: 484 SWNSLIGGYALNGCGEEALTLFEEMK 509
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/637 (30%), Positives = 338/637 (53%), Gaps = 31/637 (4%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVI-- 59
+ +A+ +F++MP RD V+WN +I GY NG+ + A+ ++ + D +T ++V+
Sbjct: 225 LDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRA 284
Query: 60 ----AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYV-CNGLIDEALRVFHGMPLKDV 114
+ + D + G E G++ +DV+ N ++S Y NGLID R+F M L+D
Sbjct: 285 CGGLGSVEEGDIIHGLIEKI-GIK-KDVIVNNGLLSMYCKFNGLID-GRRIFDKMVLRDA 341
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGAR---DVASWTIMVNGLVREGRIVEARKLFDKM 171
VSWN +I + + F EM + D+ + T ++ G + + + D M
Sbjct: 342 VSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYM 401
Query: 172 PAK----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
D A N++I Y G + ++++F M +D SW +IN + + D A+
Sbjct: 402 ITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAM 461
Query: 228 SYFKQMPETCEK---TWNSIISVLIRNG---LVKEAHSYLEKYPY-SNIASWTNVIVGYF 280
FK M + T+ ++S+ + G L KE H L K + SNI ++ Y
Sbjct: 462 KLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYA 521
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ GE+G ++KVFE M RD+ WN +I ++ GL+ +M+ G +PD AT S
Sbjct: 522 KCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLS 581
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
+L +CS L G++IH K+ V N +I MY++CG+++++ F + D
Sbjct: 582 ILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKD 641
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+++W ++I +G +KA+ F M PD + FV ++ ACS++GLV++G YF
Sbjct: 642 VVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFH 701
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
MK Y ++PR HY CVVDLL R L+D+A + I + ++ ++WGALL ACR+
Sbjct: 702 RMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF---ILSMPLKPDSSIWGALLSACRMS 758
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
+ ++ + ER++EL P+++G Y++++ +Y + G+ + + I +K G+KK+PGCSW
Sbjct: 759 GDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSW 818
Query: 581 IQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
++I + +VF +G +F + LL +L + +E
Sbjct: 819 MEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKE 855
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 226/492 (45%), Gaps = 50/492 (10%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYF 137
+V WNS+I NGL EAL ++ D ++ VI A ++A+S
Sbjct: 138 NVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 197
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ S + N L+ R + +ARK+F++MP +DV +WN +I+GY NG
Sbjct: 198 DRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWN 257
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A +++ + R+L G+V P++ T +S++ G
Sbjct: 258 EALEIYYRF--RNL--------GVV---------------PDS--YTMSSVLRACGGLGS 290
Query: 254 VKEA---HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
V+E H +EK N ++ Y + + ++F+ M RD WN MI G
Sbjct: 291 VEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICG 350
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
+ L EE +K F++M PD T TS+L C L L+ G+ +H I
Sbjct: 351 YSQVGLYEESIKLFMEMVNQF-KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECD 409
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
TT SN +I MYA+CGN+ ++ FS + D +SWNS+I +G ++A++LF+ M+
Sbjct: 410 TTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK- 468
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
TD KPD +T+V +LS + G + G+ C K +VD+ + G +
Sbjct: 469 TDVKPDSVTYVMLLSMSTQLGDLXLGK-ELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMG 527
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHN---NIKVGEIAGERVMELEPNNSGVYLI 546
+++ + ++A I W ++ +C +H+ N+ + I+ R + P+ + + I
Sbjct: 528 DSLKVFENMKARDI----ITWNTIIASC-VHSEDCNLGLRMISRMRTEGVTPDMATMLSI 582
Query: 547 LTEMYLSCGRRE 558
L L +R+
Sbjct: 583 LPVCSLLAAKRQ 594
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 181/433 (41%), Gaps = 75/433 (17%)
Query: 212 QLINGLVNSRRIDAAISYFK-QMPETCEKTWNSIISVLIRNGLVKEAHSY--------LE 262
+LI + R ++ S F+ P WNSII L NGL EA S L+
Sbjct: 112 KLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQ 171
Query: 263 KYPYSNIASWTNVIVGY--FEMGE----------------VGSAI--------------K 290
Y+ S N G FEM + +G+A+ K
Sbjct: 172 PDTYT-FPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARK 230
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
VFE M RDV WN +I G N E L+ + + + G PD+ T +SVL C L +
Sbjct: 231 VFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGS 290
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
++ G IH KI + V+N +++MY + + F + + D +SWN++ICG
Sbjct: 291 VEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICG 350
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM-------- 462
+ G E++++LF M + FKPD +T +L AC + G ++ G+Y D M
Sbjct: 351 YSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECD 409
Query: 463 ------------KNKYFLQPR----------SAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
K L + S + ++++ + G DEAM L ++
Sbjct: 410 TTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKT 469
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRRED 559
D ++ + LL ++ +G+ + ++ N N V L +MY CG D
Sbjct: 470 D-VKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGD 528
Query: 560 AKRIFAQMKENGV 572
+ ++F MK +
Sbjct: 529 SLKVFENMKARDI 541
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 203/598 (33%), Positives = 327/598 (54%), Gaps = 33/598 (5%)
Query: 52 MFTYNTVI--AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
+F + +I + + +S ++ A +F+ +E ++ WNSMI G + AL F M
Sbjct: 61 LFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRM 120
Query: 110 PLKDVVSWNLVIGALV-NCQRMDLAE------SYFKEMG-ARDVASWTIMVNGLVREGRI 161
V + L+ +C ++ A ++ ++G DV T ++N + G +
Sbjct: 121 IYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEM 180
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
A+ +FD+ +D ++ +IAGY G + A LF +M +D+ SW +I G
Sbjct: 181 NNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMG 240
Query: 222 RIDAAISYFKQMPETC----EKTWNSIISVLIRNG---LVKEAHSYLEKYPY-SNIASWT 273
R A+ F+ M + E T S++S ++ L S++E SN+
Sbjct: 241 RSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVN 300
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
+I Y + G++ +A ++F+ M RDV WNVMI G +E L F +M SG P
Sbjct: 301 ALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEP 360
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
TF S+L C+ L +DLG+ IHA K + T++S ++I +YA+CGNI +A F
Sbjct: 361 TEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVF 420
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ I + SWN++ICGLA HG A+KA ELF +M +P++ITFVG+LSAC +AGLVD
Sbjct: 421 DGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVD 480
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN--EIRADGIEVSPTVWG 511
G+ +F M Y + P+S HY C++DLLGR GL +EA +LL E++ DG +WG
Sbjct: 481 LGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDG-----AIWG 535
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
+LLGACR H +++GE+ ER+ ELEP+N G Y++L+ +Y G+ +D RI ++ + G
Sbjct: 536 SLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRG 595
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE--------REILFD 621
+KK PGC+ I++++ H FL GD HP+ + +L + +++ E+L+D
Sbjct: 596 MKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYD 653
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 208/446 (46%), Gaps = 46/446 (10%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D +I Y ++G ++NA +F+Q RD ++ +IAG + A+++FD M
Sbjct: 163 DVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMP 222
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQR---MDLAES 135
V+DVV+WN+MI+GY G EAL +F M +V + + ++ L C + +DL S
Sbjct: 223 VKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNS 282
Query: 136 YFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
+ R + S +VN L+ + G + AR+LFD M +DV +WN+MI GY
Sbjct: 283 MRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCS 342
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN 251
A LF++M L +G+ E E T+ SI+
Sbjct: 343 YKEALALFREM----------LASGV-----------------EPTEITFLSILPSCAHL 375
Query: 252 GLV---KEAHSYLEK-YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
G + K H+Y+ K + + + T++I Y + G + +A +VF+ M + + WN MI
Sbjct: 376 GAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMI 435
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR- 366
GL + ++ + F +M G P+ TF +L+ C +DLG+Q + ++ +
Sbjct: 436 CGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKI 495
Query: 367 NQFTTVSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+ + MI + R G + A LL+ V I W S++ HG E +
Sbjct: 496 SPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAI-WGSLLGACRDHGRVELGELVA 554
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAG 450
E RL + +PD+ +LS YAG
Sbjct: 555 E--RLFELEPDNPGAYVLLSNI-YAG 577
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 196/671 (29%), Positives = 328/671 (48%), Gaps = 65/671 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
+ A+ +F +M RD VTW+ MI Y N A F +M E + T+ +++
Sbjct: 107 VASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKA 166
Query: 62 LMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
++ +++ GME DV ++I+ Y G I A VFH M ++VVS
Sbjct: 167 CNNYSILEKGRKIHTIVKAMGMET-DVAVATALITMYSKCGEISVACEVFHKMTERNVVS 225
Query: 117 WNLVIGALVNCQRMDLAESYFKEM-----------------------------------G 141
W +I A ++++ A +++M
Sbjct: 226 WTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHIS 285
Query: 142 ARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG-----CV 192
R + + I+ N L+ + + EAR++FD+M +DV +W+ MIAGY +G +
Sbjct: 286 ERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESI 345
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT--------WNSI 244
L ++M + K ++ + A+ +Q+ K +I
Sbjct: 346 DEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAI 405
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
++ + G + EA K N+ +WT+ + Y + G++ SA KVF M TR+V WN
Sbjct: 406 FNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWN 465
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
+MI G +N + + MK G PD T ++L C L L+ G+ +HA+A+K+
Sbjct: 466 LMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKL 525
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
T V+ ++I MY++CG + A F + D ++WN+++ G HG +A++LF
Sbjct: 526 GLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLF 585
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
+RM P++IT V+SACS AGLV +GR F M+ + + PR HY C+VDLLGR
Sbjct: 586 KRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGR 645
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G + EA I++ E +VW ALLGAC+ HNN+++ E A ++ELEP+ + VY
Sbjct: 646 AGRLQEAEEF---IQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVY 702
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
+ L+ +Y GR +D+ ++ M + G+KK+ G S I+I+ H F++ D +HP+ +
Sbjct: 703 ITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIH 762
Query: 605 YLLNLLHTEIE 615
L L E++
Sbjct: 763 AELETLTKEMK 773
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 148/340 (43%), Gaps = 56/340 (16%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + +V SA +VF MT RDV W+ MI N+ + F +M ++ P+ TF
Sbjct: 101 YSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITF 160
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
S+L C++ L+ GR+IH + V+ A+ITMY++CG I A F +
Sbjct: 161 LSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTE 220
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC------------ 446
+++SW +II A H +A EL+E+M P+ +TFV +L++C
Sbjct: 221 RNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRI 280
Query: 447 ----SYAGL-------------------VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
S GL V + R FD M + + ++ ++
Sbjct: 281 HSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVIS-----WSAMIAGYA 335
Query: 484 RFGL-----IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
+ G IDE LL +R +G+ + + ++L AC H ++ G R + E
Sbjct: 336 QSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQG-----RQIHAEL 390
Query: 539 NNSGVYL------ILTEMYLSCGRREDAKRIFAQMKENGV 572
+ G L + MY CG +A+++F++M V
Sbjct: 391 SKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNV 430
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 129/296 (43%), Gaps = 51/296 (17%)
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E ++ +K+ G ++ T+ V+ C+ + G+ +H Q ++ + N++I
Sbjct: 39 EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLI 98
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
Y++ ++ SA F + + D+++W+S+I A + + KA + FERM + +P+ I
Sbjct: 99 NFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRI 158
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI--------- 488
TF+ +L AC+ ++++GR +K ++ A T ++ + + G I
Sbjct: 159 TFLSILKACNNYSILEKGRKIHTIVK-AMGMETDVAVATALITMYSKCGEISVACEVFHK 217
Query: 489 ----------------------DEAMNLLNEIRADGIEVSPTVWGALLGAC--------- 517
+EA L ++ GI + + +LL +C
Sbjct: 218 MTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRG 277
Query: 518 -RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
RIH++I ER +E + V L MY C ++A+ IF +M + V
Sbjct: 278 RRIHSHI------SERGLE---TDMIVANALITMYCKCNSVQEAREIFDRMSKRDV 324
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 10/140 (7%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-PER---DMFTYNTVIA 60
++ EA+ +FDKM RDTV WN M+ GY ++G A+ LF +M ER + T VI+
Sbjct: 546 QVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVIS 605
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVT-----WNSMISGYVCNGLIDEALRVFHGMPLK-DV 114
++ VQ +E+F M+ +T + M+ G + EA MP + D+
Sbjct: 606 ACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDI 665
Query: 115 VSWNLVIGALVNCQRMDLAE 134
W+ ++GA + + LAE
Sbjct: 666 SVWHALLGACKSHNNVQLAE 685
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 196/636 (30%), Positives = 335/636 (52%), Gaps = 41/636 (6%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PERDMFTYNTVIA 60
+A++LFD +P R V+WN + Y + A+ LF+ M E + + V
Sbjct: 63 DARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCT 122
Query: 61 GLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
GL D+VQG K G ++ D + N+++ Y G++++A VF + D+V
Sbjct: 123 GL--EDSVQGRK--IHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIV 178
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE--GRIVE--ARKLFDKM 171
SWN +I V + A +EM + ++ ++ G + R+L +
Sbjct: 179 SWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSL 238
Query: 172 PAKDVQAWNLMIAGYLD--NGCVGV--AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
D+ + + + G +D + C + A +F+ M +RD+ +W +I+G + + A
Sbjct: 239 IKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAA 298
Query: 228 SYFKQMP-------ETCEKTWNSIISVLIRNGLVKEAHSYLEK--YPYSNIASWTNVIVG 278
S F M +T T I+ L N + ++ H+ K + + N ++I
Sbjct: 299 SLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVV-NSLIDT 357
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G V A +VFE D+ ++ ++ ++ GEE L+ +++M++ G PD+
Sbjct: 358 YGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVC 417
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+S+L C+ L + G+Q+H +K N+++ MYA+CG+I+ A FS +P+
Sbjct: 418 SSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPV 477
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
I+SW+++I GLA HGY ++AL+LF++M P+ IT V VL AC++AGLV + ++Y
Sbjct: 478 RGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHY 537
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F+ MK + ++P HY C++DLLGR G ++ AM L+N++ + + VWGALLGA R
Sbjct: 538 FNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMP---FQANALVWGALLGAAR 594
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
IH NI +GE A E ++ LEP SG +++L +Y S G + R+ MK+ VKKEPG
Sbjct: 595 IHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGM 654
Query: 579 SWIQINDGGHVFLSGDSSHPK----FHRLRYLLNLL 610
SW+++ D + F+ GD SH + + +L L +LL
Sbjct: 655 SWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLL 690
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 188/442 (42%), Gaps = 59/442 (13%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----E 235
N ++ Y G G A LF + DR + SW L + V+S A+S F M
Sbjct: 49 NSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIR 108
Query: 236 TCEKTWNSIISVLIRNGLV-----KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAI 289
E + +S+I+V GL ++ H YL K Y + A N +V Y ++G + A
Sbjct: 109 PNEFSLSSMINVC--TGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDAS 166
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
VF+ + D+ WN +I G ++ L+ +M +SG P+ T +S L C+ +
Sbjct: 167 SVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMA 226
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
+LGRQ+H+ IK+ + + +I MY++C ++ A L F +P D+I+WN++I
Sbjct: 227 LRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVIS 286
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS---------------ACSYAGLVDQ 454
G + + E+A LF M + T VL A S +
Sbjct: 287 GHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEF 346
Query: 455 GRYYFDCMKNKYFLQPRSAH------------------YTCVVDLLGRFGLIDEAMNLLN 496
Y + + + Y + H +T +V + G +EA+ L
Sbjct: 347 DNYVVNSLIDTY---GKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYL 403
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM------ELEPNNSGVYLILTEM 550
E++ GI+ V +LL AC + + G+ ++ ++ NS L M
Sbjct: 404 EMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNS-----LVNM 458
Query: 551 YLSCGRREDAKRIFAQMKENGV 572
Y CG EDA F+++ G+
Sbjct: 459 YAKCGSIEDASCAFSRIPVRGI 480
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 208/483 (43%), Gaps = 99/483 (20%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVI-- 59
+++A ++FD++ + D V+WN +I G + + A+ L +M + +MFT ++ +
Sbjct: 162 LEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKA 221
Query: 60 -AGL-----------------MQSDNVQG---------------AKEVFDGMEVRDVVTW 86
AG+ M SD+ G A+ VF M RD++ W
Sbjct: 222 CAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAW 281
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA 146
N++ISG+ N +EA +F M + + + ++ A +++ A +
Sbjct: 282 NAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLK 341
Query: 147 SW----TIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
S +VN L+ + G + +A ++F++ P D+ + ++ Y +G A L
Sbjct: 342 SGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRL 401
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
+ +M DR + + + L+N+ A++S ++Q K+ H
Sbjct: 402 YLEMQDRGIKPDSFVCSSLLNAC---ASLSAYEQG---------------------KQVH 437
Query: 259 SYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
++ K+ + S+I + +++ Y + G + A F + R + W+ MI GL ++ G+
Sbjct: 438 VHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGK 497
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS---- 373
E L+ F QM + G P++ T SVL C+ HA + A++ F ++
Sbjct: 498 EALQLFKQMLKVGVPPNHITLVSVLCACN-----------HAGLVAEAKHYFNSMKILFG 546
Query: 374 --------NAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHG---YAEKAL 421
MI + R G +++A+ + +P + + W +++ H E+A
Sbjct: 547 IEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAA 606
Query: 422 ELF 424
E+
Sbjct: 607 EML 609
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 59/316 (18%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
F SVL C+ L LG+Q+H + + V+N+++ +YA+CG A F ++
Sbjct: 12 AFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAI 71
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD--Q 454
P ++SWN++ + +A+ LF M L+ +P++ + +++ C+ GL D Q
Sbjct: 72 PDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCT--GLEDSVQ 129
Query: 455 GRYYFD-CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
GR +K Y SA +VD+ + G++++A ++ +EI I W A+
Sbjct: 130 GRKIHGYLIKLGYDSDAFSA--NALVDMYAKVGILEDASSVFDEIAKPDI----VSWNAI 183
Query: 514 LGACRIHN------------------------NIKVGEIAGERVMELE------------ 537
+ C +H + + AG + EL
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
++S + + L +MY C +DA+ +F M E + +W + +SG S +
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDM-----IAW-------NAVISGHSQN 291
Query: 598 PKFHRLRYLLNLLHTE 613
+ L L+HTE
Sbjct: 292 EEDEEAASLFPLMHTE 307
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 190/629 (30%), Positives = 317/629 (50%), Gaps = 40/629 (6%)
Query: 5 RIQEAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
R+ A + FD +P +RDTV N +I Y + A+ +F + + +G
Sbjct: 103 RLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSL----------LASGS 152
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
++ D+ + G + + IS C L L+ G L N ++
Sbjct: 153 LRPDDYSFTALLSAGGHLPN-------ISVRHCAQLHCSVLKSGAGGALS---VCNALVA 202
Query: 123 ALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
+ C+ + A EM +D +WT MV G VR G + AR +F+++ K W
Sbjct: 203 LYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVW 262
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQM-- 233
N MI+GY+ +G A +LF++M D ++ +++ N S Q+
Sbjct: 263 NAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIR 322
Query: 234 ------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGS 287
PE N++++ + G + A + ++ SW ++ GY E +
Sbjct: 323 LQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDK 382
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A++VFE M ++ W VM+ G E+ LK F +M+ P + T+ + C +
Sbjct: 383 AVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGE 442
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
L L G+Q+H +++ + NA+ITMYARCG ++ A L F +P D +SWN++
Sbjct: 443 LGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAM 502
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
I L HG+ +ALELF+RM PD I+F+ VL+AC+++GLVD+G YF+ MK +
Sbjct: 503 ISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFG 562
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
+ P HYT ++DLLGR G I EA +L I+ E +P++W A+L CR ++++G
Sbjct: 563 IIPGEDHYTRLIDLLGRAGRIGEARDL---IKTMPFEPTPSIWEAILSGCRTSGDMELGA 619
Query: 528 IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGG 587
A +++ ++ P + G Y++L+ Y + G DA R+ M++ GVKKEPGCSWI+ +
Sbjct: 620 HAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKV 679
Query: 588 HVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
HVFL GD+ HP+ H + L ++ ++ +
Sbjct: 680 HVFLVGDTKHPEAHEVYKFLEMVGAKMRK 708
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 164/397 (41%), Gaps = 96/397 (24%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-ER---DMFTYN 56
+R + A+++F+++ + V WN MI GY +G A LF +M ER D FT+
Sbjct: 239 VRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFT 298
Query: 57 TVIA-----GLM----------------------------------QSDNVQGAKEVFDG 77
+V++ GL + N+ A+ +FD
Sbjct: 299 SVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDN 358
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF 137
M ++DVV+WN+++SGYV + +D+A+ VF MP K+ +SW +++ V+ + A F
Sbjct: 359 MTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLF 418
Query: 138 KEMGARDV---------------------------------------ASWTIMVNGLVRE 158
+M + +V ++ ++ R
Sbjct: 419 NKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARC 478
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLI 214
G + EA +F MP D +WN MI+ +G A +LF +M D S+ ++
Sbjct: 479 GAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVL 538
Query: 215 NGLVNSRRIDAAISYFKQMPE-----TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
+S +D YF+ M E + +I +L R G + EA ++ P+
Sbjct: 539 TACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPT 598
Query: 270 AS-WTNVIVGYFEMG--EVG--SAIKVFELMTTRDVT 301
S W ++ G G E+G +A ++F++ D T
Sbjct: 599 PSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGT 635
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 217/737 (29%), Positives = 351/737 (47%), Gaps = 132/737 (17%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------------------- 47
+A+ LFD MP + TWN MI Y NG ++ L+ +M
Sbjct: 168 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 227
Query: 48 --PERD-----------------MFTYNTVIAGLMQSDNVQGAKEVFDGM-EVRDVVTWN 87
+R +F N+++ + +++ GA+++FD M E DVV+WN
Sbjct: 228 LLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN 287
Query: 88 SMISGYVCNGLIDEALRVF----------------------------------HGMPLK- 112
SMIS Y NG EALR+F H LK
Sbjct: 288 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 347
Query: 113 ----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
+V N +I +M A + F M D SW M++G V+ G EA + +
Sbjct: 348 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 407
Query: 169 DKMPA---------------------------------------KDVQAWNLMIAGYLDN 189
+M D+Q N ++ Y
Sbjct: 408 HEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKF 467
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWNSIISVL 248
+ + +F KM D+D+ SW +I G + A+ F+++ E + I S+L
Sbjct: 468 CSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSIL 527
Query: 249 IR-NGL-----VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
+ +GL VKE HSY+ + S++ ++ Y E G V A ++FEL+ +DV
Sbjct: 528 LACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVS 587
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
W MI N L E L+ F MKE+G PD+ + S+L+ + L L G++IH I
Sbjct: 588 WTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLI 647
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
+ ++++ ++ MYARCG ++ + F+ + D++ W S+I HG A++
Sbjct: 648 RKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAID 707
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
LF RM PD I FV VL ACS++GL+++GR + + MK +Y L+P HY C+VDLL
Sbjct: 708 LFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLL 767
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
GR ++EA + G+EV PT VW ALLGAC+IH+N ++GEIA ++++E++P N
Sbjct: 768 GRANHLEEAYQFVK-----GMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPEN 822
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
G Y++++ +Y + R +D + + +MK +G+KK PGCSWI++ + H F++ D SHP+
Sbjct: 823 PGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQS 882
Query: 601 HRLRYLLNLLHTEIERE 617
+ + L+ + ++ +E
Sbjct: 883 YEIYSKLSQITEKLAKE 899
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 136/548 (24%), Positives = 242/548 (44%), Gaps = 66/548 (12%)
Query: 31 YFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR----DVVTW 86
Y K G L +A LF+ MP + +FT+N +I + + G+ E++ M V D T+
Sbjct: 160 YGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTF 219
Query: 87 NSMISGYVCNGLIDEALRV-FHGMPLKD-----VVSWNLVIGALVNCQRMDLAESYFKEM 140
++ C L D HG+ +K+ V N ++G C ++ A F M
Sbjct: 220 PCILKA--CGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRM 277
Query: 141 GAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAK------------------------- 174
+ DV SW M++ G+ +EA +LF +M
Sbjct: 278 PEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQG 337
Query: 175 --------------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+V N +IA Y G +G A ++F M D D SW +++G V +
Sbjct: 338 MFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQN 397
Query: 221 RRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEKYPY-SNIASW 272
A+ ++ +M + +K SII+ R+G + H+Y K S++
Sbjct: 398 GLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVG 457
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+++ Y + + +F+ M +DV W +I G +N L+ F +++ G
Sbjct: 458 NSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGID 517
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
D +S+L CS L + ++IH+ I+ + + N ++ +Y CGN+ A
Sbjct: 518 LDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDL-VLQNGIVDVYGECGNVDYAARM 576
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F + D++SW S+I ++G A +ALELF M+ T +PD I+ V +LSA + +
Sbjct: 577 FELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSAL 636
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+G+ + K F+ S T +VD+ R G ++++ N+ N IR + +W +
Sbjct: 637 KKGKEIHGFLIRKGFVLEGSLAST-LVDMYARCGTLEKSRNVFNFIRNKDL----VLWTS 691
Query: 513 LLGACRIH 520
++ A +H
Sbjct: 692 MINAYGMH 699
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 174/407 (42%), Gaps = 51/407 (12%)
Query: 156 VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
+ EG+ V A + V ++ Y GC+ AE LF M + + +W +I
Sbjct: 130 LSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIG 189
Query: 216 GLVNSRRIDAAISYFKQMP------ETCEKTWNSIISVLIRNGLVK------EAHSYLEK 263
V + ++ +++M + C + +L GL+K E H K
Sbjct: 190 AYVTNGEPLGSLELYREMRVSGIPLDAC-----TFPCILKACGLLKDRRCGAEVHGLAIK 244
Query: 264 YPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLK 321
Y +I N IVG Y + ++ A ++F+ M + DV WN MI N E L+
Sbjct: 245 EGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALR 304
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F +M+++ +P+ TF + L C D + G IHA +K + V+NA+I MYA
Sbjct: 305 LFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYA 364
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
R G + A F ++ D ISWNS++ G +G +AL+ + MR KPD + +
Sbjct: 365 RFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVIS 424
Query: 442 VLSACSYAG--------------------------LVDQ-----GRYYFDCMKNKYFLQP 470
+++A + +G LVD Y DC+ +K
Sbjct: 425 IIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDK-MPDK 483
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+T ++ + G A+ L E++ +GI++ + ++L AC
Sbjct: 484 DVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLAC 530
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 168/384 (43%), Gaps = 35/384 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
R ++ EA N+F M DT++WN M+ G+ +NG A+ +++M + D+ +
Sbjct: 365 RFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVIS 424
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGY-VCNGLIDEALR---------VFH 107
+IA +S N +GM++ N + S V N L+D + +F
Sbjct: 425 IIAASARSGN------TLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFD 478
Query: 108 GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD-------VASWTIMVNGLVREGR 160
MP KDVVSW +I A F+E+ ++S + +GL
Sbjct: 479 KMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISS 538
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ E + D+ N ++ Y + G V A +F+ + +D+ SW +I+ V++
Sbjct: 539 VKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHN 598
Query: 221 RRIDAAISYFKQMPET-CEKTWNSIISVLIRNGLV------KEAHSYLEKYPYSNIASWT 273
+ A+ F M ET E S++S+L + KE H +L + + S
Sbjct: 599 GLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA 658
Query: 274 NVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+ +V Y G + + VF + +D+ +W MI G + G + F +M++ +
Sbjct: 659 STLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIA 718
Query: 333 PDNATFTSVLTICSDLPTLDLGRQ 356
PD+ F +VL CS ++ GR+
Sbjct: 719 PDHIAFVAVLYACSHSGLMNEGRR 742
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 112/289 (38%), Gaps = 50/289 (17%)
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV--SNAMITM 379
F S S D A ++SVL +C L G+Q+HA I + F +V S ++ M
Sbjct: 102 LFANQSPSQFSLDEA-YSSVLELCGSKKALSEGQQVHAHMI-TSNALFNSVFLSTRLVFM 159
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y +CG + A F +P I +WN++I +G +LEL+ MR++ D TF
Sbjct: 160 YGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTF 219
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH-------------YTCVVDLLGRFG 486
+L AC GL+ R C + L + + YT DL G
Sbjct: 220 PCILKAC---GLLKDRR----CGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQ 272
Query: 487 LID-------------------------EAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
L D EA+ L E++ + + + A L AC +
Sbjct: 273 LFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSS 332
Query: 522 NIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
IK G V++ N V L MY G+ +A IF M +
Sbjct: 333 FIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDD 381
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 190/629 (30%), Positives = 328/629 (52%), Gaps = 44/629 (6%)
Query: 21 TVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
T N ++ Y ++G L A LF+ MP+ ++FT N +++ L + + +F M
Sbjct: 45 TYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMPQ 104
Query: 81 RDVVTWNSMISGY---------------------VCNGLIDEALRV-FHGMPLKDVVSWN 118
RD V++N++I+G+ V +G R+ GM + +
Sbjct: 105 RDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALGD 164
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+G V+CQ M L + +W+ +V+ + G I +A+++FD+M K+V
Sbjct: 165 RALGRQVHCQIMRLGFGAY-------AFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVM 217
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC- 237
+N MI G L V A +F+ M DRD +W ++ GL + A+ F++M
Sbjct: 218 YNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGV 277
Query: 238 ---EKTWNSIISV---LIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIK 290
+ T+ SI++ L + K+ H+Y + Y NI + ++ Y + + A
Sbjct: 278 GIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEA 337
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
VF MT +++ W MI G G+N GEE ++ F +M+ G P++ T SV++ C++L +
Sbjct: 338 VFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLAS 397
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
L+ G Q H A+ + TVS+A++T+Y +CG+I+ A F +P HD +S+ +++ G
Sbjct: 398 LEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSG 457
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
A G A++ ++LFE+M L KP+ +TF+GVLSACS +GLV++G YF M+ + +
Sbjct: 458 YAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVL 517
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIR--ADGIEVSPTVWGALLGACRIHNNIKVGEI 528
HYTC++DL R G + EA + ++ D I W LL ACR+ ++++G+
Sbjct: 518 LDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIG-----WATLLSACRLRGDMEIGKW 572
Query: 529 AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGH 588
A E +++ +P N Y++L M+ S G + + M++ VKKEPGCSWI+ + H
Sbjct: 573 AAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVH 632
Query: 589 VFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
+F + D SHP + L L++++ E
Sbjct: 633 IFSADDQSHPFSGTIYEKLQWLNSKMAEE 661
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 188/444 (42%), Gaps = 80/444 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I +A+ +FD+M ++ V +N MI G + ++ A +F M +RD T+ T++ GL Q+
Sbjct: 200 IGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQN 259
Query: 66 DNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGL-IDEALRVFHGMPLKDVVSWNLV 120
A +VF M D T+ S+++ C L E + H ++ + N+
Sbjct: 260 GLQSEALDVFRRMRAEGVGIDQYTFGSILTA--CGALAASEEGKQIHAYTIRTLYDGNIF 317
Query: 121 IG-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
+G ALV+ C+ + LAE+ F+ M +++ SWT M+ G + G EA ++F +M
Sbjct: 318 VGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDG 377
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
++ N G + + C +A + + L++GL + +A
Sbjct: 378 IKP-NDFTLGSVISSCANLAS-----LEEGAQFHCMALVSGLRPYITVSSA--------- 422
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
++++ + G +++AH ++ P+ + S+T ++ GY + G+ I +FE M
Sbjct: 423 --------LVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKM 474
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG- 354
+ G P+ TF VL+ CS ++ G
Sbjct: 475 LLK-------------------------------GVKPNGVTFIGVLSACSRSGLVEKGC 503
Query: 355 ------RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP-IHDIISWNSI 407
+Q H I + + +T MI +Y+R G ++ A +P D I W ++
Sbjct: 504 SYFHSMQQDH--GIVLLDDHYT----CMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATL 557
Query: 408 ICGLAYHGYAEKALELFERMRLTD 431
+ G E E + TD
Sbjct: 558 LSACRLRGDMEIGKWAAENLLKTD 581
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 148/323 (45%), Gaps = 60/323 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+R ++EA+ +F+ M RD++TW M+ G +NG A+ +F +M D +T+
Sbjct: 226 LRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFG 285
Query: 57 TVI---AGLMQSD--------------------------------NVQGAKEVFDGMEVR 81
+++ L S+ +++ A+ VF M +
Sbjct: 286 SILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCK 345
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV-NCQRMDLAE--SYFK 138
++++W +MI GY NG +EA+RVF M + + +G+++ +C + E + F
Sbjct: 346 NIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFH 405
Query: 139 EM----GARD---VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
M G R V+S + + G + G I +A +LFD+MP D ++ +++GY G
Sbjct: 406 CMALVSGLRPYITVSSALVTLYG--KCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGK 463
Query: 192 VGVAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMPE-----TCEKTWN 242
DLF+KM + + ++ +++ S ++ SYF M + + +
Sbjct: 464 AKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYT 523
Query: 243 SIISVLIRNGLVKEAHSYLEKYP 265
+I + R+G +KEA ++ + P
Sbjct: 524 CMIDLYSRSGRLKEAEEFIRQMP 546
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 172/568 (30%), Positives = 294/568 (51%), Gaps = 34/568 (5%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW--NSMISGYVCNGLIDEALRVFHG 108
D + +I+ + ++ +F T+ N+++ Y N L A+ +F
Sbjct: 89 DPLAASKLISSYALQRRLPASRRIFASFPNPQATTFLPNTLLRAYALNALPHAAVSLFSA 148
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
MP +D +++ +I AL + L R V S + + +
Sbjct: 149 MPQRDSFTYSFLIKALSSSGLTPL----------RAVHSHVVKLGSI------------- 185
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+D N +I Y NG A +F++M RD SW + +V + +A
Sbjct: 186 -----EDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQGEVASARR 240
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
F +MP+ +WN+++ + G +++A + P N+ SW+ V+ GY + G++ A
Sbjct: 241 MFDEMPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGYCKKGDIEMA 300
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+F+ M T+++ W +M+ +N L EE + F QMKE+ D A S+L C++
Sbjct: 301 RVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVVSILAACAES 360
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF-SSVPIHDIISWNSI 407
+L LG++IH + T V NAMI M+ +CG + A F + + D +SWN+I
Sbjct: 361 GSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTI 420
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
I G A HG+ +KAL+ F +M+L F+PD +T + VLSAC++ G V++GR +F M+ Y
Sbjct: 421 IGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVEEGRQHFSNMERDYG 480
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
+ P+ HY C++DLLGR GLI+EA+ L+ + D EV +WG+LL ACR+H N++ E
Sbjct: 481 IVPQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEV---IWGSLLSACRLHKNVEYAE 537
Query: 528 IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGG 587
IA + +L+P+N+G Y +L+ +Y G+ D + QMK G +K G SWI++++
Sbjct: 538 IAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKSAGSSWIELDEAF 597
Query: 588 HVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
H F GD H ++ +++ L + ++
Sbjct: 598 HEFTVGDRKHSDSDQISEMVDRLSSHVK 625
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 218/462 (47%), Gaps = 30/462 (6%)
Query: 5 RIQEAQNLFDKMPQRDTVTW--NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
R+ ++ +F P T+ N ++R Y N A+ LF+ MP+RD FTY+ +I L
Sbjct: 105 RLPASRRIFASFPNPQATTFLPNTLLRAYALNALPHAAVSLFSAMPQRDSFTYSFLIKAL 164
Query: 63 MQSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
S + + V + + D N++I Y NG +A +VF MP +D VSWN
Sbjct: 165 -SSSGLTPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWN 223
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+ A+V + A F EM +D SW +++G + G++ +A +LF MP ++V +
Sbjct: 224 SAMAAMVRQGEVASARRMFDEMPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVS 283
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC- 237
W+ +++GY G + +A +F KM ++L +W +++ + ++ A F QM E
Sbjct: 284 WSTVVSGYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAV 343
Query: 238 EKTWNSIISVLIRN------GLVKEAHSYLEKYPYSNIASWTNVIVGYF-EMGEVGSAIK 290
E +++S+L L K H Y+ N ++ F + G V A
Sbjct: 344 ELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADY 403
Query: 291 VFEL-MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
VF+ + +D WN +I G + G++ L FF QMK G PD T +VL+ C+ +
Sbjct: 404 VFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMG 463
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVP--IHDIISWN 405
++ GRQ H ++ + + MI + R G I+ A+ S+P +++I W
Sbjct: 464 FVEEGRQ-HFSNMERDYGIVPQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVI-WG 521
Query: 406 SIICGLAYHG---YAEKALELFERMRLTDFKPDDITFVGVLS 444
S++ H YAE A+ L+ +P + VLS
Sbjct: 522 SLLSACRLHKNVEYAEIAVN-----ELSKLQPSNAGNYAVLS 558
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 139/275 (50%), Gaps = 17/275 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N +A +F++MP+RDTV+WN + + G + +A +F++MP++D ++NTV+ G
Sbjct: 200 KNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQGEVASARRMFDEMPDKDTVSWNTVLDG 259
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
++ ++ A E+F M R+VV+W++++SGY G I+ A +F MP K++V+W +++
Sbjct: 260 YTKAGKMEDAFELFQCMPERNVVSWSTVVSGYCKKGDIEMARVIFDKMPTKNLVTWTIMV 319
Query: 122 GALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLF----DKMPA 173
A ++ A F +M DVA+ ++ G + +++ +
Sbjct: 320 SACAQNGLVEEAGRLFTQMKEAAVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLG 379
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQ-KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+ N MI + GCV A+ +F ++ ++D SW +I G D A+ +F Q
Sbjct: 380 RSTHVCNAMIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQ 439
Query: 233 M------PETCEKTWNSIISVLIRNGLVKEAHSYL 261
M P+ T +++S G V+E +
Sbjct: 440 MKLQGFRPDAV--TMINVLSACTHMGFVEEGRQHF 472
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 148/286 (51%), Gaps = 22/286 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + A+ +FD+MP +DTV+WN ++ GY K G +++A LF MPER++ +++TV++
Sbjct: 230 VRQGEVASARRMFDEMPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVS 289
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVS 116
G + +++ A+ +FD M +++VTW M+S NGL++EA R+F M DV +
Sbjct: 290 GYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAA 349
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFD-KM 171
++ A + L + + + R + T + N ++ + G + A +FD ++
Sbjct: 350 VVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFDTEI 409
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAI 227
KD +WN +I G+ +G A D F +M + D + +++ + ++
Sbjct: 410 AEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVEEGR 469
Query: 228 SYFKQM-------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
+F M P+ + + +I +L R GL++EA ++ P+
Sbjct: 470 QHFSNMERDYGIVPQI--EHYGCMIDLLGRGGLIEEAVGLIKSMPW 513
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 196/654 (29%), Positives = 332/654 (50%), Gaps = 64/654 (9%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D VT + ++ Y K LD ++ F+ MPE++ +++ +IAG +Q+D+++G E+F M+
Sbjct: 208 DVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQ 267
Query: 80 VRDVVTWNSMISGYV--CNGLIDEALRV---FHGMPLKDVVSWNLVIGA-----LVNCQR 129
V S + C GL ALR+ HG LK ++VIG + C
Sbjct: 268 KAGVGVSQSTFASVFRSCAGL--SALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNN 325
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
+ A+ F + ++ S+ ++ G R + +EA +F + + + ++G
Sbjct: 326 LSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAF-R 384
Query: 190 GCVGVAEDLFQ-KMHDRDLTSWKQ----LINGLVN----SRRIDAAISYFKQMPETCEKT 240
C + DL ++H + S Q + N +++ + A F++M +
Sbjct: 385 ACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVS 444
Query: 241 WNSIISVLIRNGLVKEAHSYL----------EKYPYSNI----ASWTNVIVG-------- 278
WN+II+ +NG ++ S +++ Y ++ A W + G
Sbjct: 445 WNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRII 504
Query: 279 -----------------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
Y + G + A K+ + + + V WN +I G EE K
Sbjct: 505 KSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQK 564
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F +M E G PDN T+ ++L C++L T++LG+QIHAQ IK +S+ ++ MY+
Sbjct: 565 TFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYS 624
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CGN+Q L F P D ++WN+++CG A HG E+AL++FE M+L + KP+ TF+
Sbjct: 625 KCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLA 684
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
VL AC + GLV++G +YF M + Y L P+ HY+CVVD++GR G + +A+ L I
Sbjct: 685 VLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALEL---IEGM 741
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
E +W LL C+IH N++V E A +++LEP +S Y++L+ +Y + G +
Sbjct: 742 PFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVT 801
Query: 562 RIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
++ M+ NG+KKEPGCSWI+I H FL GD +HP+ + L++L E++
Sbjct: 802 KLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMK 855
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 139/541 (25%), Positives = 239/541 (44%), Gaps = 56/541 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ + ++ A +FD MPQRDTV+WN M+ GY G + A LF+ MPERD+ ++N++I+
Sbjct: 88 IKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLIS 147
Query: 61 GLMQSDNVQGAKEVF----------------------------------DGMEVR----- 81
G + + + + +VF G+ V+
Sbjct: 148 GYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDC 207
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
DVVT ++++ Y +D +++ FH MP K+ VSW+ +I V + FKEM
Sbjct: 208 DVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQ 267
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAK--------DVQAWNLMIAGYLDNGCVG 193
V + R + A +L ++ DV + Y+ +
Sbjct: 268 KAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLS 327
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A+ LF + + +L S+ +I G S + A+ F+ + ++ +S R
Sbjct: 328 DAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACA 387
Query: 254 V-------KEAHSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV 305
V + H ++ SNI ++ Y + G + A VFE M +RD WN
Sbjct: 388 VIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNA 447
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
+I +N E+ L FV M +SG PD T+ SVL C+ L+ G +IH + IK
Sbjct: 448 IIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSR 507
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
+ V A+I MY++CG ++ A + ++SWN+II G + +E+A + F
Sbjct: 508 LGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFS 567
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRF 485
+M PD+ T+ +L C+ V+ G+ + K LQ + + +VD+ +
Sbjct: 568 KMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKE-LQSDAYISSTLVDMYSKC 626
Query: 486 G 486
G
Sbjct: 627 G 627
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 141/570 (24%), Positives = 252/570 (44%), Gaps = 63/570 (11%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+F N +I ++ +++ A +VFDGM RD V+WN+M+ GY G I A ++F MP
Sbjct: 77 VFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPE 136
Query: 112 KDVVSWN-LVIGALVNCQRMDLAESYFK--EMGAR-DVASWTIMV---NGLVREGRIVEA 164
+DVVSWN L+ G L N + + + + MG D ++ +++ + L G ++
Sbjct: 137 RDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQI 196
Query: 165 RKLFDKMPAK-DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
L KM DV + ++ Y + + F M +++ SW +I G V + +
Sbjct: 197 HGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDL 256
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNG-------LVKEAHSYLEKYPYSNIASWTNVI 276
+ FK+M + S + + R+ L + H + K + T+V+
Sbjct: 257 RGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFG-----TDVV 311
Query: 277 VG------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
+G Y + + A K+F + ++ +N +I G +D G E L F +++SG
Sbjct: 312 IGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSG 371
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
D + + C+ + G Q+H ++K V+NA++ MY +CG + A
Sbjct: 372 LGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEAC 431
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC---- 446
L F + D +SWN+II +G EK L LF M + +PD+ T+ VL AC
Sbjct: 432 LVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQ 491
Query: 447 --------------------SYAG--LVDQGRYYFDC--MKNKYFLQPRSAHYTCVV--D 480
S+ G L+D Y C M+ L R A T V
Sbjct: 492 ALNCGMEIHNRIIKSRLGLDSFVGIALIDM---YSKCGMMEKAEKLHDRLAEQTVVSWNA 548
Query: 481 LLGRFGL---IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
++ F L +EA +++ G++ + +L C +++G+ ++++ E
Sbjct: 549 IISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKE 608
Query: 538 -PNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
+++ + L +MY CG +D + IF +
Sbjct: 609 LQSDAYISSTLVDMYSKCGNMQDFQLIFEK 638
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 126/541 (23%), Positives = 224/541 (41%), Gaps = 79/541 (14%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM-------- 52
M+ + +AQ LF+ +P + ++N +I GY ++ A+ +F + + +
Sbjct: 321 MKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLS 380
Query: 53 --FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
F VI G ++ V G + ++ N+++ Y G + EA VF M
Sbjct: 381 GAFRACAVIKGDLEGLQVHGLS--MKSLCQSNICVANAILDMYGKCGALVEACLVFEEMV 438
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEM------------GA--RDVASWTIMVNGLV 156
+D VSWN +I A + S F M G+ + A W + G+
Sbjct: 439 SRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGME 498
Query: 157 REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
RI+++R D +I Y G + AE L ++ ++ + SW +I+G
Sbjct: 499 IHNRIIKSRLGLDSFVGI------ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISG 552
Query: 217 LVNSRRIDAAISYFKQMPETCEK----TWNSIISV---LIRNGLVKEAHSYLEKYPYSNI 269
++ + A F +M E T+ +I+ L+ L K+ H+ + K +
Sbjct: 553 FSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSD 612
Query: 270 ASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
A ++ +V Y + G + +FE RD WN M+ G ++ LGEE LK F M+
Sbjct: 613 AYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQL 672
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
P++ATF +VL C + ++ G ++M++ Y +
Sbjct: 673 ENVKPNHATFLAVLRACGHMGLVEKGLHYF---------------HSMLSNYG----LDP 713
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
L +S V DI + G KALEL E M F+ D + + +LS C
Sbjct: 714 QLEHYSCVV--DI---------MGRSGQVSKALELIEGM---PFEADAVIWRTLLSICKI 759
Query: 449 AGLVDQG-RYYFDCMKNKYFLQPR-SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
G V+ + + ++ L+P SA Y + ++ G+ +E L +R +G++
Sbjct: 760 HGNVEVAEKAAYSILQ----LEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKE 815
Query: 507 P 507
P
Sbjct: 816 P 816
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 115/306 (37%), Gaps = 76/306 (24%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
TF+ + CSD L G+Q HA+ I V+N +I MY +C +++ A F +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 397 PIHDIISWN-------------------------------SIICGLAYHGYAEKALELFE 425
P D +SWN S+I G ++G K +++F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQG----------RYYFDC-------------- 461
+M D TF VL +CS L D G + FDC
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCS--SLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAK 221
Query: 462 -------------MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
M K ++ + CV + R GL L E++ G+ VS +
Sbjct: 222 CKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGL-----ELFKEMQKAGVGVSQS 276
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT-EMYLSCGRREDAKRIFAQM 567
+ ++ +C + +++G ++ + V T +MY+ C DA+++F +
Sbjct: 277 TFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSL 336
Query: 568 KENGVK 573
+ ++
Sbjct: 337 PNHNLQ 342
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 217/737 (29%), Positives = 351/737 (47%), Gaps = 132/737 (17%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------------------- 47
+A+ LFD MP + TWN MI Y NG ++ L+ +M
Sbjct: 132 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 191
Query: 48 --PERD-----------------MFTYNTVIAGLMQSDNVQGAKEVFDGM-EVRDVVTWN 87
+R +F N+++ + +++ GA+++FD M E DVV+WN
Sbjct: 192 LLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN 251
Query: 88 SMISGYVCNGLIDEALRVF----------------------------------HGMPLK- 112
SMIS Y NG EALR+F H LK
Sbjct: 252 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 311
Query: 113 ----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
+V N +I +M A + F M D SW M++G V+ G EA + +
Sbjct: 312 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 371
Query: 169 DKMPA---------------------------------------KDVQAWNLMIAGYLDN 189
+M D+Q N ++ Y
Sbjct: 372 HEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKF 431
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWNSIISVL 248
+ + +F KM D+D+ SW +I G + A+ F+++ E + I S+L
Sbjct: 432 CSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSIL 491
Query: 249 IR-NGL-----VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
+ +GL VKE HSY+ + S++ ++ Y E G V A ++FEL+ +DV
Sbjct: 492 LACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVS 551
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
W MI N L E L+ F MKE+G PD+ + S+L+ + L L G++IH I
Sbjct: 552 WTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLI 611
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
+ ++++ ++ MYARCG ++ + F+ + D++ W S+I HG A++
Sbjct: 612 RKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAID 671
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
LF RM PD I FV VL ACS++GL+++GR + + MK +Y L+P HY C+VDLL
Sbjct: 672 LFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLL 731
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
GR ++EA + G+EV PT VW ALLGAC+IH+N ++GEIA ++++E++P N
Sbjct: 732 GRANHLEEAYQFVK-----GMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPEN 786
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
G Y++++ +Y + R +D + + +MK +G+KK PGCSWI++ + H F++ D SHP+
Sbjct: 787 PGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQS 846
Query: 601 HRLRYLLNLLHTEIERE 617
+ + L+ + ++ +E
Sbjct: 847 YEIYSKLSQITEKLAKE 863
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 136/548 (24%), Positives = 242/548 (44%), Gaps = 66/548 (12%)
Query: 31 YFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR----DVVTW 86
Y K G L +A LF+ MP + +FT+N +I + + G+ E++ M V D T+
Sbjct: 124 YGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTF 183
Query: 87 NSMISGYVCNGLIDEALRV-FHGMPLKD-----VVSWNLVIGALVNCQRMDLAESYFKEM 140
++ C L D HG+ +K+ V N ++G C ++ A F M
Sbjct: 184 PCILKA--CGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRM 241
Query: 141 GAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAK------------------------- 174
+ DV SW M++ G+ +EA +LF +M
Sbjct: 242 PEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQG 301
Query: 175 --------------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+V N +IA Y G +G A ++F M D D SW +++G V +
Sbjct: 302 MFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQN 361
Query: 221 RRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEKYPY-SNIASW 272
A+ ++ +M + +K SII+ R+G + H+Y K S++
Sbjct: 362 GLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVG 421
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+++ Y + + +F+ M +DV W +I G +N L+ F +++ G
Sbjct: 422 NSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGID 481
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
D +S+L CS L + ++IH+ I+ + + N ++ +Y CGN+ A
Sbjct: 482 LDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDL-VLQNGIVDVYGECGNVDYAARM 540
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F + D++SW S+I ++G A +ALELF M+ T +PD I+ V +LSA + +
Sbjct: 541 FELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSAL 600
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+G+ + K F+ S T +VD+ R G ++++ N+ N IR + +W +
Sbjct: 601 KKGKEIHGFLIRKGFVLEGSLAST-LVDMYARCGTLEKSRNVFNFIRNKDL----VLWTS 655
Query: 513 LLGACRIH 520
++ A +H
Sbjct: 656 MINAYGMH 663
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 205/496 (41%), Gaps = 82/496 (16%)
Query: 156 VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
+ EG+ V A + V ++ Y GC+ AE LF M + + +W +I
Sbjct: 94 LSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIG 153
Query: 216 GLVNSRRIDAAISYFKQMP------ETCEKTWNSIISVLIRNGLVK------EAHSYLEK 263
V + ++ +++M + C + +L GL+K E H K
Sbjct: 154 AYVTNGEPLGSLELYREMRVSGIPLDAC-----TFPCILKACGLLKDRRYGAEVHGLAIK 208
Query: 264 YPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLK 321
Y +I N IVG Y + ++ A ++F+ M + DV WN MI N E L+
Sbjct: 209 EGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALR 268
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F +M+++ +P+ TF + L C D + G IHA +K + V+NA+I MYA
Sbjct: 269 LFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYA 328
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
R G + A F ++ D ISWNS++ G +G +AL+ + MR KPD + +
Sbjct: 329 RFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVIS 388
Query: 442 VLSACSYAG--------------------------LVDQ-----GRYYFDCMKNKYFLQP 470
+++A + +G LVD Y DC+ +K
Sbjct: 389 IIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDK-MPDK 447
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC----------RIH 520
+T ++ + G A+ L E++ +GI++ + ++L AC IH
Sbjct: 448 DVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIH 507
Query: 521 NNI------------KVGEIAGE--------RVMEL-EPNNSGVYLILTEMYLSCGRRED 559
+ I + ++ GE R+ EL E + + + Y+ G +
Sbjct: 508 SYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANE 567
Query: 560 AKRIFAQMKENGVKKE 575
A +F MKE GV+ +
Sbjct: 568 ALELFHLMKETGVEPD 583
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 167/384 (43%), Gaps = 35/384 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
R ++ EA N+F M DT++WN M+ G+ +NG A+ +++M + D+ +
Sbjct: 329 RFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVIS 388
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGY-VCNGLIDEALR---------VFH 107
+IA +S N GM++ N + S V N L+D + +F
Sbjct: 389 IIAASARSGN------TLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFD 442
Query: 108 GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD-------VASWTIMVNGLVREGR 160
MP KDVVSW +I A F+E+ ++S + +GL
Sbjct: 443 KMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISS 502
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ E + D+ N ++ Y + G V A +F+ + +D+ SW +I+ V++
Sbjct: 503 VKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHN 562
Query: 221 RRIDAAISYFKQMPET-CEKTWNSIISVLIRNGLV------KEAHSYLEKYPYSNIASWT 273
+ A+ F M ET E S++S+L + KE H +L + + S
Sbjct: 563 GLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA 622
Query: 274 NVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+ +V Y G + + VF + +D+ +W MI G + G + F +M++ +
Sbjct: 623 STLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIA 682
Query: 333 PDNATFTSVLTICSDLPTLDLGRQ 356
PD+ F +VL CS ++ GR+
Sbjct: 683 PDHIAFVAVLYACSHSGLMNEGRR 706
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 114/285 (40%), Gaps = 42/285 (14%)
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV--SNAMITM 379
F S S D A ++SVL +C L G+Q+HA I + F +V S ++ M
Sbjct: 66 LFANQSPSQFSLDEA-YSSVLELCGSKKALSEGQQVHAHMI-TSNALFNSVFLSTRLVFM 123
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y +CG + A F +P I +WN++I +G +LEL+ MR++ D TF
Sbjct: 124 YGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTF 183
Query: 440 VGVLSACSYAGLVDQGRYYFD----CMKNKYFLQPRSAH-----YTCVVDLLGRFGLID- 489
+L AC GL+ RY + +K Y A+ YT DL G L D
Sbjct: 184 PCILKAC---GLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDR 240
Query: 490 ------------------------EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKV 525
EA+ L E++ + + + A L AC + IK
Sbjct: 241 MPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQ 300
Query: 526 GEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
G V++ N V L MY G+ +A IF M +
Sbjct: 301 GMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDD 345
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 195/660 (29%), Positives = 333/660 (50%), Gaps = 71/660 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTY- 55
M+ + ++ +N+FD+M +R+ VTW +I GY +N + + LF +M + + FT+
Sbjct: 143 MKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFA 202
Query: 56 ----------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVR 81
N++I ++ NV+ A+ +FD EV+
Sbjct: 203 AALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK 262
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDLAESYFKEM 140
VVTWNSMISGY NGL EAL +F+ M L V +++ C +L E F E
Sbjct: 263 SVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCA--NLKELRFTEQ 320
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
V + + + +R +V K + A + + + G +G
Sbjct: 321 LHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDA---------LRLFKETGFLG------- 364
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV---KEA 257
++ SW +I+G + + + A+ F +M + SV++ V E
Sbjct: 365 -----NVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEV 419
Query: 258 HSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
H+ + K Y ++ T ++ Y ++G+V A KVF + +D+ W+ M+ G +
Sbjct: 420 HAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGET 479
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICS-DLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
E +K F ++ + G P+ TF+S+L +C+ ++ G+Q H AIK + VS+A
Sbjct: 480 EAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSA 539
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
++TMYA+ G+I+SA F D++SWNS+I G A HG A KAL++F+ M+ K D
Sbjct: 540 LLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 599
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
+TF+GV +AC++AGLV++G YFD M + P H +C+VDL R G +++AM ++
Sbjct: 600 SVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 659
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
+ + T+W +L ACR+H ++G +A E+++ + P +S Y++L+ MY G
Sbjct: 660 DNMPN---LAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESG 716
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
++ ++ M E VKKEPG SWI++ + + FL+GD SHP ++ L L T ++
Sbjct: 717 DWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLK 776
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 178/411 (43%), Gaps = 44/411 (10%)
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A +LF K DRD S+ L+ G R A F + + SI S +++
Sbjct: 50 AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109
Query: 255 -------KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVM 306
++ H K+ + +++ T+++ Y + VF+ M R+V W +
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
I G N L EE L F++M++ G P++ TF + L + ++ G Q+H +K
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 229
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
++ VSN++I +Y +CGN++ A + F + +++WNS+I G A +G +AL +F
Sbjct: 230 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 289
Query: 427 MRLTDFKPDDITFVGVLSACS-----------------YAGLVDQG------RYYFDCM- 462
MRL + + +F ++ C+ Y + DQ Y CM
Sbjct: 290 MRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMA 349
Query: 463 --------KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
K FL + + L G +EA+ L +E++ G+ + + +L
Sbjct: 350 MLDALRLFKETGFLGNVVSWTAMISGFLQNDGK-EEAVGLFSEMKRKGVRPNEFTYSVIL 408
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
A + I E+ + V +S V L + Y+ G+ ++A ++F+
Sbjct: 409 TALPV---ISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFS 456
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 126/551 (22%), Positives = 221/551 (40%), Gaps = 80/551 (14%)
Query: 32 FKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMIS 91
FK F A L N P ++ + G S + A +FD RD ++ S++
Sbjct: 16 FKLKFCIYANELGNLKPNFRIYCF-----GAASSSRLYYAHNLFDKSPDRDRESYTSLLF 70
Query: 92 GYVCNGLIDEALRVF----H-GMPLKDVVSWNLVIGALVNCQRM---DLAESYFKEMGAR 143
G+ +G EA R+F H GM + + +++ + C + L K
Sbjct: 71 GFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLD 130
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
DV+ T +V+ ++ + R +FD+M ++V W +I+GY N LF +M
Sbjct: 131 DVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQ 190
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEK 263
D NS AA+ + E + +V+++NGL K
Sbjct: 191 DEGTQP---------NSFTFAAALGVLAE--EGVGGRGLQVHTVVVKNGLDK-------T 232
Query: 264 YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
P SN ++I Y + G V A +F+ + V WN MI G N L E L F
Sbjct: 233 IPVSN-----SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 287
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
M+ + ++F S++ +C++L L Q+H +K + A++ Y++C
Sbjct: 288 YSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKC 347
Query: 384 GNIQSALLEFSSVP-IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
+ AL F + +++SW ++I G + E+A+ LF M+ +P++ T+ +
Sbjct: 348 MAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVI 407
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
L+A ++ + +K Y + S T ++D + G +DEA + + I
Sbjct: 408 LTALP---VISPSEVHAQVVKTNY--ERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKD 462
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
I W A+L Y G E A +
Sbjct: 463 I----VAWSAMLAG----------------------------------YAQAGETEAAIK 484
Query: 563 IFAQMKENGVK 573
IF+++ + GVK
Sbjct: 485 IFSELTKGGVK 495
>gi|15223809|ref|NP_177827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098688|sp|O49287.1|PP127_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial; Flags: Precursor
gi|2829915|gb|AAC00623.1| Hypothetical protein [Arabidopsis thaliana]
gi|332197804|gb|AEE35925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 695
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/628 (30%), Positives = 332/628 (52%), Gaps = 58/628 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R+ ++ A+NLFD+MP R+ +WN MI GY +G ++ F+ MPERD +++N V++G
Sbjct: 74 RSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSG 133
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-DVVSWNLV 120
++ + A+ +F+ M +DVVT NS++ GY+ NG +EALR+F + D ++ V
Sbjct: 134 FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTV 193
Query: 121 IGA-------------------------------LVN----CQRMDLAESYFKEMGARDV 145
+ A LVN C + +A +++ D
Sbjct: 194 LKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDD 253
Query: 146 ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
S + +++G GR+ E+R LFD+ + V WN MI+GY+ N A LF +M +
Sbjct: 254 HSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE 313
Query: 206 ---DLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWNSIISVLIRNGLV---KEAH 258
D + +IN + ++ KQM C+ + I +++ + L+ +
Sbjct: 314 TREDSRTLAAVINACIGLGFLETG----KQMHCHACK--FGLIDDIVVASTLLDMYSKCG 367
Query: 259 SYLEKYP-YSNIASWTNVIVG-----YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
S +E +S + S+ +++ YF G + A +VFE + + + WN M G +
Sbjct: 368 SPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQ 427
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N E L++F QM + D + +SV++ C+ + +L+LG Q+ A+A + + V
Sbjct: 428 NGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVV 487
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
S+++I +Y +CG ++ F ++ D + WNS+I G A +G +A++LF++M +
Sbjct: 488 SSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGI 547
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
+P ITF+ VL+AC+Y GLV++GR F+ MK + P H++C+VDLL R G ++EA+
Sbjct: 548 RPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAI 607
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
NL+ E+ D V ++W ++L C + +G+ A E+++ELEP NS Y+ L+ ++
Sbjct: 608 NLVEEMPFD---VDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFA 664
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSW 580
+ G E + + M+EN V K PG SW
Sbjct: 665 TSGDWESSALVRKLMRENNVTKNPGSSW 692
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/529 (23%), Positives = 226/529 (42%), Gaps = 55/529 (10%)
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
V+ N ++ Y +G + A +F MP ++ SWN +I +N + +F M
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
RD SW ++V+G + G + AR+LF+ MP KDV N ++ GY+ NG A LF+++
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL 181
Query: 203 H-DRDLTSWKQLINGLVNSRRIDAAISYFKQM----PETCEKTWNSIISVLIRNGLVKEA 257
+ D + ++ + Q+ E K +S+++V + G ++ A
Sbjct: 182 NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMA 241
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
LE+ + S + +I GY G V + +F+ + R V +WN MI G N++
Sbjct: 242 SYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKM 301
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E L F +M+ D+ T +V+ C L L+ G+Q+H A K V++ ++
Sbjct: 302 EALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLL 360
Query: 378 TMYARCGNIQSALLEFSSVPIHD-------------------------------IISWNS 406
MY++CG+ A FS V +D +ISWNS
Sbjct: 361 DMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNS 420
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
+ G + +G + LE F +M D D+++ V+SAC+ ++ G F
Sbjct: 421 MTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIV 479
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN---- 522
L + ++DL + G ++ + + + ++ W +++ +
Sbjct: 480 GLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM----VKSDEVPWNSMISGYATNGQGFEA 535
Query: 523 ---IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
K +AG R P ++LT CG E+ +++F MK
Sbjct: 536 IDLFKKMSVAGIR-----PTQITFMVVLTACNY-CGLVEEGRKLFESMK 578
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/573 (32%), Positives = 316/573 (55%), Gaps = 27/573 (4%)
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVI 121
D + A VF+ ++ +++ WN+M+ G+ + AL ++ M L + S+ ++
Sbjct: 12 DGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLL 71
Query: 122 GALVNCQRMD----LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
+ + + + K D T +++ R G + +ARK+FD +DV
Sbjct: 72 KSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVV 131
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
+ +I GY G A +F ++ +RD+ SW +I G V + R + A+ FK+M T
Sbjct: 132 SCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTN 191
Query: 238 ----EKTWNSIISVLIRNG---LVKEAHSYLEK----YPYSNIASWTNVIVG-YFEMGEV 285
E T S++S ++G L ++ HS+++ + +S+ N ++ Y + G+V
Sbjct: 192 VRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDV 251
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
+A +FE ++ +DV WN +I G +L +E L F +M SG P++ T SVL C
Sbjct: 252 ETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPAC 311
Query: 346 SDLPTLDLGRQIHA---QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
+ L +D+GR IH + +K N+ T++ ++I MYA+CG+I++A F+S+ +
Sbjct: 312 AHLGAIDIGRWIHVYIDKKLKGVTNE-TSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLS 370
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
SWN++I G A HG A A +LF RMR +PDDITFVG+LSACS++GL+D GR F M
Sbjct: 371 SWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSM 430
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
Y L P+ HY C++DLLG GL EA +++ + +E +W +LL AC+ H N
Sbjct: 431 TQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTM---PMEPDGVIWCSLLKACKKHGN 487
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
+++ E ++++++EP NSG Y++L+ +Y + GR ED R+ + G+KK PGCS I+
Sbjct: 488 LELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIE 547
Query: 583 INDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
++ H F+ GD HP+ + ++L + ++E
Sbjct: 548 VDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLE 580
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 139/576 (24%), Positives = 241/576 (41%), Gaps = 102/576 (17%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D +I Y +NG L++A +F+ RD+ + +I G + + A++VFD +
Sbjct: 98 DRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEIT 157
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKE 139
RDVV+WN+MI+GYV NG +EAL +F M +V + ++V+ A+S E
Sbjct: 158 ERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSA----CAQSGSIE 213
Query: 140 MGARDVASWTI-------------MVNGLV----REGRIVEARKLFDKMPAKDVQAWNLM 182
+G R V SW +VN L+ + G + A LF+ + KDV +WN +
Sbjct: 214 LG-RQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTL 272
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN 242
I GY A LFQ+M + S ++ +P C
Sbjct: 273 IGGYTHTNLYKEALLLFQEM---------------LRSGECPNDVTLLSVLP-ACAHLGA 316
Query: 243 SIISVLIRNGLVKEAHSYLEK--YPYSNIASW-TNVIVGYFEMGEVGSAIKVFELMTTRD 299
I I H Y++K +N S T++I Y + G++ +A +VF M R
Sbjct: 317 IDIGRWI--------HVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRS 368
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
++ WN MIFG + F +M+ + PD+ TF +L+ CS LDLGRQI
Sbjct: 369 LSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQI-- 426
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
+S +++ P + + +I L + G ++
Sbjct: 427 --------------------------FKSMTQDYNLTP--KLEHYGCMIDLLGHSGLFKE 458
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR-SAHYTCV 478
A E+ M + +PD + + +L AC G ++ + + ++P S Y +
Sbjct: 459 AEEMIHTMPM---EPDGVIWCSLLKACKKHGNLELAESF---AQKLIKIEPENSGSYVLL 512
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM--EL 536
++ G ++ + + G++ P C ++I+V + E ++ +L
Sbjct: 513 SNIYATAGRWEDVARVRGVLNGKGMKKVP--------GC---SSIEVDSVVHEFIIGDKL 561
Query: 537 EPNNSGVYLILTEMYLS---CGRREDAKRIFAQMKE 569
P +Y +L EM + G D + +M+E
Sbjct: 562 HPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEE 597
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 142/357 (39%), Gaps = 93/357 (26%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
RN +++A+ +FD RD V+ +I GY G +A +F+++ ERD+ ++N +I G
Sbjct: 111 RNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITG 170
Query: 62 LMQSDNVQGAKEVFDGMEV--------------------------RDVVTW--------- 86
+++ + A E+F M R V +W
Sbjct: 171 YVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHG 230
Query: 87 --------NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFK 138
N++I Y G ++ A +F G+ KDVVSWN +IG + A F+
Sbjct: 231 FSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQ 290
Query: 139 EM----------------------GARDVASW-------------------TIMVNGLVR 157
EM GA D+ W T +++ +
Sbjct: 291 EMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAK 350
Query: 158 EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQL 213
G I A ++F+ M + + +WN MI G+ +G A DLF +M + D ++ L
Sbjct: 351 CGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGL 410
Query: 214 INGLVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVKEAHSYLEKYP 265
++ +S +D FK M + T + +I +L +GL KEA + P
Sbjct: 411 LSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMP 467
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/555 (33%), Positives = 311/555 (56%), Gaps = 27/555 (4%)
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D + A VFD ++ +++ WN+M G+ + AL ++ M +V + L+
Sbjct: 51 DGLTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLL 110
Query: 126 NCQRMDLA-------ESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
A + ++G D+ T ++ V+ GR +ARK+FD+ +DV
Sbjct: 111 KACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVV 170
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
++ +I GY NG + A+ +F ++ +D+ SW LI+G + A+ FK+M +T
Sbjct: 171 SYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTN 230
Query: 238 ----EKTWNSIISVLIRNG---LVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAI 289
E T +++S ++ L ++ HS+++ + + SN+ +I Y + GEV +A
Sbjct: 231 VKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAS 290
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
+FE ++ +DV WN +I G +L +E L F +M SG SP+ T S+L C+ L
Sbjct: 291 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLG 350
Query: 350 TLDLGRQIHA---QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
+D+GR IH + +K N +++ ++I MYA+CG+I++A F S+ + SWN+
Sbjct: 351 AIDIGRWIHVYIDKRLKGVSNP-SSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNA 409
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
+I G A HG A A ++F RMR +PDDITFVG+LSACS++G++D GR+ F M Y
Sbjct: 410 MIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDY 469
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLN--EIRADGIEVSPTVWGALLGACRIHNNIK 524
+ P+ HY C++DLLG GL EA ++N E+ DG+ +W +LL AC++H N++
Sbjct: 470 KITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGV-----IWCSLLKACKMHGNVE 524
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIN 584
+GE + ++++EP NSG Y++L+ +Y + GR + + A + + G+KK PGCS I+I+
Sbjct: 525 LGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEID 584
Query: 585 DGGHVFLSGDSSHPK 599
H F+ GD HP+
Sbjct: 585 SVVHEFIIGDKLHPR 599
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 234/518 (45%), Gaps = 74/518 (14%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D++ + ++IA +++ + A++VFD RDVV++ ++I GY NG I A ++F +P
Sbjct: 137 DLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIP 196
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNGLVREGRIVEARK 166
+KDVVSWN +I A FKEM +V ++ +++ + I R+
Sbjct: 197 VKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQ 256
Query: 167 LF----DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ D +++ N +I Y+ G V A LF+ + +D+ SW LI G +
Sbjct: 257 VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNL 316
Query: 223 IDAAISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEK--YPYSNIASW- 272
A+ F++M + E T SI+ G + + H Y++K SN +S
Sbjct: 317 YKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLR 376
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T++I Y + G++ +A +VF+ M R ++ WN MIFG + F +M++ G
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIE 436
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD+ TF +L+ CS LDLGR I +S +
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHI----------------------------FRSMTED 468
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
+ P + + +I L + G ++A E+ M + PD + + +L AC G V
Sbjct: 469 YKITP--KLEHYGCMIDLLGHSGLFKEAEEMINSMEM---DPDGVIWCSLLKACKMHGNV 523
Query: 453 DQGRYYFDCMKNKYFLQPR-SAHYTCVVDLL---GRFGLIDEAMNLLNEIRADGIEVSPT 508
+ G + +N ++P+ S Y + ++ GR+ + + LLN+ G++ P
Sbjct: 524 ELGESF---AQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLND---KGMKKVP- 576
Query: 509 VWGALLGACRIHNNIKVGEIAGERVM--ELEPNNSGVY 544
C ++I++ + E ++ +L P N +Y
Sbjct: 577 -------GC---SSIEIDSVVHEFIIGDKLHPRNREIY 604
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 151/346 (43%), Gaps = 89/346 (25%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N R ++A+ +FD+ RD V++ +I+GY NG++ +A +F+++P +D+ ++N +I+
Sbjct: 149 VKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALIS 208
Query: 61 GLMQSDNVQGAKEVFDGMEV--------------------------RDVVTW-------- 86
G ++ N + A E+F M R V +W
Sbjct: 209 GYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGS 268
Query: 87 -----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
N++I Y+ G ++ A +F G+ KDV+SWN +IG + A F+EM
Sbjct: 269 NLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEML 328
Query: 141 ---------------------GARDVASW-------------------TIMVNGLVREGR 160
GA D+ W T +++ + G
Sbjct: 329 RSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGD 388
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLING 216
I A+++FD M + + +WN MI G+ +G A D+F +M + D ++ L++
Sbjct: 389 IEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSA 448
Query: 217 LVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVKEA 257
+S +D F+ M E + T + +I +L +GL KEA
Sbjct: 449 CSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEA 494
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 206/668 (30%), Positives = 337/668 (50%), Gaps = 70/668 (10%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
R+ AQ ++ + +TV N +I Y + G L A +F++MP D T+NT+I+
Sbjct: 161 QGRLVHAQ-VYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRH 219
Query: 63 MQSDNVQGAKEVFDGMEVR----DVVTWNSMISG-------------------------- 92
Q N + A E+F+ M + D VT S+++
Sbjct: 220 AQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDY 279
Query: 93 ---------YVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESY--FKEMG 141
YV G+I EAL +F +VV WNL++ A Q DLA+S+ F +M
Sbjct: 280 IIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAY--GQISDLAKSFDLFCQMV 337
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMP--------AKDVQAWNLMIAGYLDNGCVG 193
A V L+R L +++ D+ ++I Y G +
Sbjct: 338 AAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLD 397
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISV 247
A + + + +D+ SW +I G V A+ FK M P+ S IS
Sbjct: 398 KARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNI--GLASAISA 455
Query: 248 L-----IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
+R G + Y+ Y ++++ W ++ Y G A +FE + +D
Sbjct: 456 CAGIKAMRQGQQIHSRVYVSGYS-ADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKIT 514
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
WN M+ G ++ L EE L+ F++M ++G + TF S ++ ++L + G+QIHA I
Sbjct: 515 WNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVI 574
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
K T V+NA+I++Y +CG+I+ A ++F + + +SWN+II + HG+ +AL+
Sbjct: 575 KTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALD 634
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
LF++M+ KP+D+TF+GVL+ACS+ GLV++G YF M +++ + PR HY CVVD+L
Sbjct: 635 LFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDIL 694
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
GR G +D A + E+ + + VW LL ACR+H NI++GE+A + ++ELEP++S
Sbjct: 695 GRAGQLDRARKFVEEMP---VSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSA 751
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHR 602
Y++L+ Y G+ + MK+ GV+KEPG SWI++ + H F GD HP H+
Sbjct: 752 SYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQ 811
Query: 603 L-RYLLNL 609
+ +YL +L
Sbjct: 812 IYKYLADL 819
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 141/561 (25%), Positives = 251/561 (44%), Gaps = 68/561 (12%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D N +I + VQ A+ VF+ + RD V+W +M+SGY NGL +EA+ ++H M
Sbjct: 76 DRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMH 135
Query: 111 LKDVVSWNLVIGALVN-CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
VV V+ ++++ C + L E +GR+V A +++
Sbjct: 136 CSGVVPTPYVLSSVLSACTKAALFE-----------------------QGRLVHA-QVYK 171
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+ + N +IA YL G + +AE +F +M D ++ LI+ ++A+
Sbjct: 172 QGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEI 231
Query: 230 FKQM------PETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYS-NIASWTNVIVGY 279
F++M P+ T S+++ G + K+ HSYL K S + +++ Y
Sbjct: 232 FEEMRLSGWTPDCV--TIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLY 289
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G + A+++F+ +V +WN+M+ G+ + F QM +G P+ T+
Sbjct: 290 VKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYP 349
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
+L C+ ++LG QIH +IK VS +I MY++ G + A +
Sbjct: 350 CLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAK 409
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG---- 455
D++SW S+I G H + ++ALE F+ M+L PD+I +SAC+ + QG
Sbjct: 410 DVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIH 469
Query: 456 -RYY----------FDCMKNKYFLQPRSAH---------------YTCVVDLLGRFGLID 489
R Y ++ + N Y RS + +V + GL +
Sbjct: 470 SRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYE 529
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILT 548
EA+ + ++ G++ + + + + A +IK G+ V++ + + V L
Sbjct: 530 EALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALI 589
Query: 549 EMYLSCGRREDAKRIFAQMKE 569
+Y CG EDAK F +M E
Sbjct: 590 SLYGKCGSIEDAKMQFFEMSE 610
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 1/163 (0%)
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC-SDLPTLDL 353
MT R N + G ++ E+ L F + F L C + L
Sbjct: 1 MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPL 60
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
IHA+AI + N +I +YA+ G +Q A F + D +SW +++ G A
Sbjct: 61 VPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYAR 120
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+G E+A+ L+ +M + P VLSAC+ A L +QGR
Sbjct: 121 NGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGR 163
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 302/543 (55%), Gaps = 41/543 (7%)
Query: 75 FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN--CQRMDL 132
+D R+V +N++ISG+V NGL + + + M L+ V+ +V C+ M++
Sbjct: 70 YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV 129
Query: 133 AESY--FKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
+ + +MG DV + +VN ++ G + +A+K+F ++ +DV WN MI GY
Sbjct: 130 KKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKI 189
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI 249
GC+ A ++F++MH + + + I G+ +S F + +
Sbjct: 190 GCLDEALEVFRRMHVKGVAPSRFTITGI---------LSVFASRGD-------------L 227
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
NG K H + K Y + S +N ++ Y + +G A+ +FE++ +D+ WN +I
Sbjct: 228 DNG--KTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIIS 285
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI-----K 363
+ + L+ F +M SG PD T T+VL CS L L GR+IH I K
Sbjct: 286 VHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGK 345
Query: 364 IARNQFT---TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
N VSNA++ MYA+CG++ +AL F S+ D+ SWN +I G HGYA +A
Sbjct: 346 DDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEA 405
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L +F +M +FKP+++T VGVLSAC++AG V GR + M++ + + P HYTCV+D
Sbjct: 406 LGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVID 465
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
+LGR G +++A ++ ++ I+ +P VW ALLGACR+H N ++ EIA +V++LEP +
Sbjct: 466 MLGRAGHLEDAYEIVQKMP---IQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEH 522
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
G Y++++ +Y GR E+ + MKE VKK PGCSWI++ DG HVF +GD +H +
Sbjct: 523 CGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFRTGDRTHSEL 582
Query: 601 HRL 603
+ L
Sbjct: 583 NAL 585
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 198/456 (43%), Gaps = 63/456 (13%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGF------------LDNAM------------------ 41
+D +R+ +N +I G+ NG L+ M
Sbjct: 69 FYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVME 128
Query: 42 ------CLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC 95
CL E D+F + ++ +++ +++ A++VF + +RDVV WN+MI+GY
Sbjct: 129 VKKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAK 188
Query: 96 NGLIDEALRVFHGMPLKDVVSWNLVIGALVN--CQRMDL-----AESYFKEMG-ARDVAS 147
G +DEAL VF M +K V I +++ R DL +MG V+
Sbjct: 189 IGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSV 248
Query: 148 WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL 207
+++ + I +A +F+ + KD+ +WN +I+ + G D ++ D+ L
Sbjct: 249 SNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCG----DHDGTLRLFDKML 304
Query: 208 TSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS 267
S ++ LV + A S+ + E I +I NGL K+ E
Sbjct: 305 GSG--ILPDLVTITTVLPACSHLAALMHGRE-----IHGYMIINGLGKDD----ENGAVD 353
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
N+ V+ Y + G + +A+K+F+ M+ +DV WN+MI G G + E L F QM
Sbjct: 354 NLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMC 413
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGN 385
E+ P+ T VL+ C+ + GR AQ ++ T+ + +I M R G+
Sbjct: 414 EAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQ-MESTFGVIPTIEHYTCVIDMLGRAGH 472
Query: 386 IQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKA 420
++ A +PI + + W +++ HG AE A
Sbjct: 473 LEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELA 508
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 143/340 (42%), Gaps = 71/340 (20%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N +++AQ +F ++ RD V WN MI GY K G LD A+ +F +M + + I
Sbjct: 156 LKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTIT 215
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGY-VCNGLID---------EALRVFHGMP 110
G++ +G ++ +G V +V SG V N LID +AL +F +
Sbjct: 216 GILSVFASRG--DLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMIN 273
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKE--------------------------MGARD 144
KD+ SWN +I C D F + M R+
Sbjct: 274 EKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGRE 333
Query: 145 VASWTIMVNGLVRE----------------------GRIVEARKLFDKMPAKDVQAWNLM 182
+ + I +NGL ++ G + A K+FD M KDV +WN+M
Sbjct: 334 IHGYMI-INGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIM 392
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT-- 240
I GY +G A +F +M + + + + G++++ +S+ + E T
Sbjct: 393 IMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFG 452
Query: 241 -------WNSIISVLIRNGLVKEAHSYLEKYPY-SNIASW 272
+ +I +L R G +++A+ ++K P +N W
Sbjct: 453 VIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVW 492
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 33/265 (12%)
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+ L C+D L+ G+Q+H+ I + ++I MY++CG + A+L F P
Sbjct: 15 VAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYD-PC 73
Query: 399 HD--IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS--------Y 448
H+ + ++N+II G +G A K + +++MRL PD TF V+ C +
Sbjct: 74 HERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVKKIH 133
Query: 449 AGLVDQGR----YYFDCMKNKYF--------------LQPRS-AHYTCVVDLLGRFGLID 489
L+ G + + N Y L R + +++ + G +D
Sbjct: 134 GCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLD 193
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--IL 547
EA+ + + G+ S +L ++ G+ VM++ +SGV + L
Sbjct: 194 EALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKM-GYDSGVSVSNAL 252
Query: 548 TEMYLSCGRREDAKRIFAQMKENGV 572
+MY C DA IF + E +
Sbjct: 253 IDMYGKCKHIGDALIIFEMINEKDI 277
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 199/628 (31%), Positives = 328/628 (52%), Gaps = 39/628 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
+R + A +F M D+VT+N +I G+ + G D A+ +F++M D T
Sbjct: 189 LRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIA 248
Query: 57 TVIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+++A +++ K++ GM + D + S++ YV +G I+EAL++F
Sbjct: 249 SLLAACSAVGDLRKGKQLHSYLLKAGMSL-DYIMEGSLLDLYVKSGDIEEALQIFDSGDR 307
Query: 112 KDVVSWNLVIGALVNCQRMDLAESY--FKEMGARDVA----SWTIMVNGLVREGRIVEAR 165
+VV WNL++ A Q DLA+S+ F M A V ++ M+ G I
Sbjct: 308 TNVVLWNLMLVAY--GQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGE 365
Query: 166 KLFDKMPA----KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
++ D+ ++I Y G + A+ + + ++D+ SW +I G V
Sbjct: 366 QIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHE 425
Query: 222 RIDAAISYFKQMPETCEKTW------NSIISVL-----IRNGLVKEAHSYLEKYPYSNIA 270
A+ FK+M + C W S IS + G A Y+ Y ++++
Sbjct: 426 FCKEALETFKEM-QAC-GIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYS-ADVS 482
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
W ++ Y G A FE + ++ WN +I G ++ L EE LK F++M ++G
Sbjct: 483 IWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAG 542
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
+ TF S ++ ++L + G+QIHA+ IK T +SNA+I++Y +CG+I+ A
Sbjct: 543 AKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAK 602
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
++F + + +SWN+II + HG +AL+LF++M+ KP D+TFVGVL+ACS+ G
Sbjct: 603 MDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVG 662
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
LV++G YF M N++ + PR HY CVVD+LGR G +D A + E+ I VW
Sbjct: 663 LVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMP---IPADSMVW 719
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
LL AC++H N+++GE A + ++ELEP++S Y++L+ Y G+ +I MK+
Sbjct: 720 RTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDR 779
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHP 598
GV+KEPG SWI++ + H F GD HP
Sbjct: 780 GVRKEPGRSWIEVKNVVHAFFVGDRLHP 807
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 133/551 (24%), Positives = 241/551 (43%), Gaps = 82/551 (14%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN- 126
V+ A+ VF+ + VRD V+W +++SGY NGL +EA+R++ M VV V+ ++++
Sbjct: 93 VRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSA 152
Query: 127 CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
C + + L + GR++ +++ + + N +I+ Y
Sbjct: 153 CTKTE-----------------------LFQLGRLIHV-QVYKQGFFSETFVGNALISLY 188
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKT 240
L +A+ +F M D ++ LI+G D A+ F +M P++ T
Sbjct: 189 LRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSV--T 246
Query: 241 WNSIISVL-----IRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFEL 294
S+++ +R G K+ HSYL K S + +++ Y + G++ A+++F+
Sbjct: 247 IASLLAACSAVGDLRKG--KQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDS 304
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+V +WN+M+ G+ D + F +M +G P+ T+ +L C+ + LG
Sbjct: 305 GDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLG 364
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
QIH+ IK VS +I MY++ G + A + D++SW S+I G H
Sbjct: 365 EQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQH 424
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR------------------ 456
+ ++ALE F+ M+ PD+I +SAC+ V QG
Sbjct: 425 EFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIW 484
Query: 457 -----YYFDCMKNKYFLQPRSA-------HYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
Y C +K A + ++ + GL +EA+ + ++ G +
Sbjct: 485 NGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAK 544
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVM------ELEPNNSGVYLILTEMYLSCGRRE 558
+ + + + A +IK G+ RV+ E E +N+ L +Y CG E
Sbjct: 545 YNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNA-----LISLYGKCGSIE 599
Query: 559 DAKRIFAQMKE 569
DAK F +M +
Sbjct: 600 DAKMDFFEMTK 610
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 162/352 (46%), Gaps = 30/352 (8%)
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
++++ ++G + AR++F+++ +D +W +++GY NG A L+++MH +
Sbjct: 82 LLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVP 141
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
+++ ++++ C KT + LI + K+ +S
Sbjct: 142 TPYVLSSILSA----------------CTKTELFQLGRLIHVQVYKQGF-------FSET 178
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
+I Y A +VF M D +N +I G + G+ L F +M+ S
Sbjct: 179 FVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLS 238
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G SPD+ T S+L CS + L G+Q+H+ +K + + +++ +Y + G+I+ A
Sbjct: 239 GLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEA 298
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
L F S +++ WN ++ K+ ++F RM +P+ T+ +L C++
Sbjct: 299 LQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHT 358
Query: 450 GLVDQGRYYFD-CMKNKYFLQPRSAHYTC--VVDLLGRFGLIDEAMNLLNEI 498
G + G +KN + +S Y ++D+ ++G +D+A +L+ I
Sbjct: 359 GEIGLGEQIHSLTIKNGF----QSDMYVSGVLIDMYSKYGWLDKAQRILDMI 406
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 121/304 (39%), Gaps = 36/304 (11%)
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC-SDLPTLDL 353
MT R +N + G D E+ L F F L C L
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPL 60
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
+IHA+AI + + + N +I +YA+ G ++ A F + + D +SW +++ G A
Sbjct: 61 VPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQ 120
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR----------------- 456
+G E+A+ L+ M + P +LSAC+ L GR
Sbjct: 121 NGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFV 180
Query: 457 ------YYFDC----MKNKYF---LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
Y C + ++ F L S + ++ + G D A+ + +E++ G+
Sbjct: 181 GNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGL 240
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI---LTEMYLSCGRREDA 560
+LL AC +++ G+ + L+ S Y++ L ++Y+ G E+A
Sbjct: 241 SPDSVTIASLLAACSAVGDLRKGKQLHSYL--LKAGMSLDYIMEGSLLDLYVKSGDIEEA 298
Query: 561 KRIF 564
+IF
Sbjct: 299 LQIF 302
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 202/651 (31%), Positives = 315/651 (48%), Gaps = 87/651 (13%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-------------- 48
N I +A+ LFD++P RD + WNVM+ GY KNG ++A+ F +M
Sbjct: 225 NGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCL 284
Query: 49 -------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDV 83
E D NT+I + N+ A+++FD M D
Sbjct: 285 LSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDT 344
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDV----------VSWNLVIGALVNCQRMDLA 133
VTWN +I+GYV NG DEA+ +F M V + L G+L C+ +
Sbjct: 345 VTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEV--- 401
Query: 134 ESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
SY G DV + +V+ + G + A K F + DV MI+GY+ NG
Sbjct: 402 HSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLN 461
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A +LF+ W L+ + ++ +P + L
Sbjct: 462 VEALNLFR---------W------LIQEGMVPNCLTMASVLPAC---------AALASLK 497
Query: 253 LVKEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
L KE H + K N+ +++ Y + G + A + F M +D WN+MI
Sbjct: 498 LGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFS 557
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF-- 369
+N E + F QM SG D+ + ++ L+ C++ P L G+++H + RN F
Sbjct: 558 QNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVV---RNSFIS 614
Query: 370 -TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
T V++ +I MY++CG + A F + + +SWNSII HG + L+LF M
Sbjct: 615 DTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMV 674
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
+PD +TF+ ++SAC +AGLVD+G YYF CM +Y + R H+ C+VDL GR G +
Sbjct: 675 EAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRL 734
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
EA + I++ WG+LLGACR+H N+++ ++A + ++EL+PNNSG Y++L+
Sbjct: 735 HEA---FDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLS 791
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
++ G E ++ + MKE GV+K PG SWI +N G H+F + D HP+
Sbjct: 792 NVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQ 842
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 221/495 (44%), Gaps = 82/495 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
++ NLF ++ ++ WN +IRG+ G D A+ F +M D +T+ VI
Sbjct: 127 FKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKA 186
Query: 62 LMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+NV K V + G + D+ +S+I Y NG I +A +F +P++D +
Sbjct: 187 CGGLNNVPLCKMVHELARSMGFHM-DLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCIL 245
Query: 117 WNLVIGALVNCQRMDLAESYFKEM-------------------GARDVASWTIMVNGLV- 156
WN+++ V + A F+EM R + I ++GLV
Sbjct: 246 WNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVI 305
Query: 157 -------------------REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+ G + +ARK+FD MP D WN +IAGY+ NG A
Sbjct: 306 RSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVA 365
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG---LV 254
LF+ M + + ++D+ T+ S + ++++G
Sbjct: 366 LFKAM--------------VTSGVKLDSI-------------TFASFLPSVLKSGSLKYC 398
Query: 255 KEAHSYLEKY--PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
KE HSY+ ++ P+ ++ + ++ YF+ G+V A K F+ T DV V MI G
Sbjct: 399 KEVHSYIVRHGVPF-DVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVL 457
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N L E L F + + G P+ T SVL C+ L +L LG+++H +K V
Sbjct: 458 NGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQV 517
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+++ MYA+ G + A F +P+ D + WN +I + +G E A++LF +M +
Sbjct: 518 GSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGT 577
Query: 433 KPDDITFVGVLSACS 447
K D ++ LSAC+
Sbjct: 578 KFDSVSLSATLSACA 592
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 149/326 (45%), Gaps = 31/326 (9%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+++I Y + G + A +F+ + RD +WNVM+ G +N L F +M+ S
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P++ +F +L++C+ + G Q+H I+ TV+N +ITMY++CGN+ A
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG-- 450
F +P D ++WN +I G +G+ ++A+ LF+ M + K D ITF L + +G
Sbjct: 336 FDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSL 395
Query: 451 ---------LVDQG------------RYYFDC----MKNKYFLQPRSAHYTCVVDLLGRF 485
+V G YF M K F Q ++ +
Sbjct: 396 KYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGY 455
Query: 486 ---GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNS 541
GL EA+NL + +G+ + ++L AC ++K+G E+ + + + N
Sbjct: 456 VLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVC 515
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQM 567
V +T MY GR + A + F +M
Sbjct: 516 QVGSSITYMYAKSGRLDLAYQFFRRM 541
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%)
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
WN +I G + L FF +M S +PD TF V+ C L + L + +H A
Sbjct: 145 WNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELAR 204
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
+ + + +++I +Y G I A F +P+ D I WN ++ G +G AL
Sbjct: 205 SMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALG 264
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
F+ MR + KP+ ++FV +LS C+ G+V G
Sbjct: 265 TFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAG 297
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 49/244 (20%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE------------ 49
++ R+ A F +MP +D+V WN+MI + +NG + A+ LF QM
Sbjct: 527 KSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSA 586
Query: 50 ---------------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
D F +T+I + + A+ VFD M+ ++
Sbjct: 587 TLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKN 646
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYFK 138
V+WNS+I+ Y +G E L +FH M D V++ +++ A + +D YF+
Sbjct: 647 EVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFR 706
Query: 139 EMG-----ARDVASWTIMVNGLVREGRIVEARKLFDKMP-AKDVQAWNLMIAGYLDNGCV 192
M + + MV+ R GR+ EA MP D W ++ +G V
Sbjct: 707 CMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNV 766
Query: 193 GVAE 196
+A+
Sbjct: 767 ELAK 770
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 96/252 (38%), Gaps = 41/252 (16%)
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
RQIHA+ + N T+ + M+ MY C + + F + + + WN +I G +
Sbjct: 96 RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSAC---------------------------- 446
G + AL F RM ++ PD TF V+ AC
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215
Query: 447 -------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+ G + +Y FD + + + +++ + G + A+ E+R
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVR-----DCILWNVMLNGYVKNGDFNSALGTFQEMR 270
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
++ + + LL C ++ G ++ G + ++ V + MY CG
Sbjct: 271 NSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLF 330
Query: 559 DAKRIFAQMKEN 570
DA++IF M +
Sbjct: 331 DARKIFDIMPQT 342
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 259/443 (58%), Gaps = 3/443 (0%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N +I Y + +G A+ LF DRD+ SW +I+G V + F +M
Sbjct: 39 NSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVI 98
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+WN+II+ G + EA ++ P N+ SW +++ G+ + G V A +F M RD
Sbjct: 99 SWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRD 158
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
V WN M+ + E L F QM+ G P AT S+L+ C+ L LD G +H
Sbjct: 159 VVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHT 218
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
+ V A++ MYA+CG I A F+++ D+++WN+II G+A HG+ ++
Sbjct: 219 YINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKE 278
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A +LF+ M+ +P+DITFV +LSACS+AG+VD+G+ DCM + Y ++P+ HY CV+
Sbjct: 279 AQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVI 338
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
DLL R GL++EAM L+ + +E +P+ GALLG CRIH N ++GE+ G+R++ L+P
Sbjct: 339 DLLARAGLLEEAMELIGTM---PMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPC 395
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
+SG Y++L+ +Y + + +DA+++ MK NG+ K PG S I++ H F++GD SHP+
Sbjct: 396 HSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPE 455
Query: 600 FHRLRYLLNLLHTEIEREILFDA 622
+++ LN +HT ++ I + A
Sbjct: 456 SNKIYDKLNEIHTRLKSAIGYSA 478
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 205/466 (43%), Gaps = 68/466 (14%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
E D + N++I ++ AK++F RDVV+WN+MI GYV G + VF
Sbjct: 32 ECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDR 91
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
M +DV+SWN +I ++D A+ F EM R++ SW M++G V+ G + EA LF
Sbjct: 92 MVCRDVISWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLF 151
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+MP +DV +WN M+A Y G A LF +M R +
Sbjct: 152 SEMPCRDVVSWNSMLACYAQCGKPNEALALFDQM------------------RAVGV--- 190
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEA---HSYL-EKYPYSNIASWTNVIVGYFEMGE 284
+ E T S++S G + + H+Y+ + N T ++ Y + G+
Sbjct: 191 ------KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGK 244
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+ A +VF M ++DV WN +I G+ + +E + F +MKE+ P++ TF ++L+
Sbjct: 245 ISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSA 304
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
CS +D G+++ + M + Y ++ +
Sbjct: 305 CSHAGMVDEGQKL---------------LDCMSSSYGIEPKVE---------------HY 334
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
+ +I LA G E+A+EL M + +P+ +L C G + G + N
Sbjct: 335 DCVIDLLARAGLLEEAMELIGTMPM---EPNPSALGALLGGCRIHGNFELGEMVGKRLIN 391
Query: 465 KYFLQP-RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
LQP S Y + ++ D+A + N ++ +GI P V
Sbjct: 392 ---LQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGV 434
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 159/333 (47%), Gaps = 58/333 (17%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ LF RD V+WN MI GY K G + + +F++M RD+ ++NT+I G +
Sbjct: 54 AKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKI 113
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQ 128
AK +FD M R++V+WNSM+SG+V G ++EA +F MP +DVVSWN ++ C
Sbjct: 114 DEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCG 173
Query: 129 RMDLAESYFKEMGARDVASW---------------------------------------T 149
+ + A + F +M A V T
Sbjct: 174 KPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGT 233
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD----- 204
+V+ + G+I A ++F+ M +KDV AWN +IAG +G V A+ LF++M +
Sbjct: 234 ALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEP 293
Query: 205 RDLTSWKQLI----NGLVN--SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
D+T L G+V+ + +D S + P+ + ++ +I +L R GL++EA
Sbjct: 294 NDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKV--EHYDCVIDLLARAGLLEEAM 351
Query: 259 SYLEKYPYSNIASWTNVIV------GYFEMGEV 285
+ P S ++ G FE+GE+
Sbjct: 352 ELIGTMPMEPNPSALGALLGGCRIHGNFELGEM 384
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 111/266 (41%), Gaps = 37/266 (13%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T+ V+ C++ G +H +K + + N++I +YA ++ +A FS
Sbjct: 2 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLC 61
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
D++SWN++I G G +F+RM D I++ +++ + G +D+ +
Sbjct: 62 SDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDV----ISWNTIINGYAIVGKIDEAK 117
Query: 457 YYFDCMKNKYFL---QPRSAHYTC--VVDLLGRF---------------------GLIDE 490
FD M + + S C V + G F G +E
Sbjct: 118 RLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNE 177
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGAC----RIHNNIKVGEIAGERVMELEPNNSGVYLI 546
A+ L +++RA G++ + +LL AC + + + + +E+ NS V
Sbjct: 178 ALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEV---NSIVGTA 234
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGV 572
L +MY CG+ A ++F M+ V
Sbjct: 235 LVDMYAKCGKISLATQVFNAMESKDV 260
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 205/642 (31%), Positives = 326/642 (50%), Gaps = 37/642 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNA--MCLFNQMPERDMFTYNTVIAGLM 63
I +A+ +F+ + +D V+WN +I GY + G + + M LF +M + +G+
Sbjct: 61 IVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVF 120
Query: 64 QSDNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+ + E F G++ DV +S+I+ Y G + +A +VF +P ++
Sbjct: 121 TA--ASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERN 178
Query: 114 VVSWNLVIGALVNCQRM-----DLAESYFKEMGARDVASWT-----IMVNGLVREGRIVE 163
VSW +I +RM +L +E GA D +T + V LV G+ +
Sbjct: 179 TVSWATIISGYA-MERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIH 237
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
L + + + N ++ Y GC+ A F+ D+D +W +I G +
Sbjct: 238 CLALKNGLLSI-ASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDS 296
Query: 224 DAAISYFKQMP----ETCEKTWNSIISVLIRNGLVKEA---HSYLEKYPYS-NIASWTNV 275
A++ F M + E T+ +I+ G ++E H Y K Y I T +
Sbjct: 297 HEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTAL 356
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ Y + G + A K F+ + D+ +W MI G +N E L + +M+ P
Sbjct: 357 VDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHE 416
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
T SVL CS L L+ G+QIHAQ IK + + +A+ TMYA+CG+++ L F
Sbjct: 417 LTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRR 476
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+P DI++WN++I GL+ +G KALELFE +R KPD +TFV VLSACS+ GLV++G
Sbjct: 477 MPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERG 536
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
+ YF M +++ + PR HY C+VD+L R G + E I + I+ +W LLG
Sbjct: 537 KVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEF---IESATIDHGMCLWRILLG 593
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
ACR + N ++G AGE++MEL S Y++L+ +Y + GR +D +R+ MK GV KE
Sbjct: 594 ACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKE 653
Query: 576 PGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
PGCSWI++ HVF+ GD HP+ ++ L L ++ E
Sbjct: 654 PGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDE 695
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 178/391 (45%), Gaps = 24/391 (6%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA 146
NS+++ Y G I +A VF + KDVVSWN +I Q+ + S+ E+ R A
Sbjct: 49 NSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGY--SQKGTVGYSFVMELFQRMRA 106
Query: 147 SWTIMVNGLVREGRIVEAR---KLFDKMPAK----------DVQAWNLMIAGYLDNGCVG 193
T + NG G A + F + A DV + +I Y GC+
Sbjct: 107 ENT-LPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCML 165
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM--PETCEKT--WNSIISVLI 249
A +F + +R+ SW +I+G R A F M E + S++S L
Sbjct: 166 DARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALT 225
Query: 250 RNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNV 305
LV K+ H K +IAS N +V Y + G + A+K FEL +D W+
Sbjct: 226 VPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSA 285
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
MI G + E L F M +G P TF V+ CSD+ L+ G+QIH ++K
Sbjct: 286 MITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAG 345
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
A++ MYA+CG++ A F + DI+ W S+I G A +G E AL L+
Sbjct: 346 YECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYC 405
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
RM++ P ++T VL ACS ++QG+
Sbjct: 406 RMQMERIMPHELTMASVLRACSSLAALEQGK 436
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 201/460 (43%), Gaps = 66/460 (14%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA--EDLFQKMHDRDLT 208
+VN + G IV+A+ +F+ + KDV +WN +I GY G VG + +LFQ+M
Sbjct: 51 LVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAE--- 107
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY-LEKYPYS 267
N L N + PET GL +AH+ ++ +
Sbjct: 108 ------NTLPNGHTFSGVFTAASSSPET-------------FGGL--QAHALAIKTSNFY 146
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
++ +++I Y ++G + A KVF+ + R+ W +I G + E + F M+
Sbjct: 147 DVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMR 206
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
+ D +TSVL+ + + G+QIH A+K +V NA++TMY +CG +
Sbjct: 207 REEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLD 266
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
AL F D I+W+++I G A G + +AL LF M L KP + TFVGV++ACS
Sbjct: 267 DALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACS 326
Query: 448 YAGLVDQGR--------------YYF---------------DCMKN-KYFLQPRSAHYTC 477
G +++G+ YF D K Y +P +T
Sbjct: 327 DIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTS 386
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERV--- 533
++ + G + A+ L ++ + I ++L AC ++ G +I + +
Sbjct: 387 MISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYG 446
Query: 534 MELE-PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LE P S L+ MY CG ED +F +M +
Sbjct: 447 FSLEVPIGSA----LSTMYAKCGSLEDGNLVFRRMPSRDI 482
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 147/352 (41%), Gaps = 40/352 (11%)
Query: 255 KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
K H+ L + + TN +V Y + G + A VFE +T +DV WN +I G +
Sbjct: 30 KAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQK 89
Query: 314 DLGEEGLKF----FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
G G F F +M+ P+ TF+ V T S P G Q HA AIK +
Sbjct: 90 --GTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYD 147
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
V +++I MY + G + A F ++P + +SW +II G A A +A ELF MR
Sbjct: 148 VFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRR 207
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+ D + VLSA + LV G+ C+ K L ++ +V + G+ G +D
Sbjct: 208 EEGAHDKFIYTSVLSALTVPDLVHYGK-QIHCLALKNGLLSIASVGNALVTMYGKCGCLD 266
Query: 490 -------------------------------EAMNLLNEIRADGIEVSPTVWGALLGACR 518
EA+NL + +G + S + ++ AC
Sbjct: 267 DALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACS 326
Query: 519 IHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
++ G +I G + L +MY CG DA++ F +KE
Sbjct: 327 DIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKE 378
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P + +F +L C+ L G+ IHAQ ++ ++N+++ +YA+CG+I A L
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKA--LELFERMRLTDFKPDDITFVGVLSACS 447
F S+ D++SWN +I G + G + +ELF+RMR + P+ TF GV +A S
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAAS 124
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 200/627 (31%), Positives = 322/627 (51%), Gaps = 29/627 (4%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLMQ 64
A+ LF MP+++ V+WN ++ GY + G + LF +M E + FT +TV+ G
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 65 SDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+ +++ K V + +R D S++ Y G + +AL+VF + DVV+W+
Sbjct: 64 TGSLREGK-VLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSA 122
Query: 120 VIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
+I L A F M GAR + + + +V+ G + + + +
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182
Query: 176 VQAWNL----MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
++ NL +I Y+ + CV +F+ M + DL SW L++G +S+ F
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFY 242
Query: 232 QMP-ETCEKTWNSIISVL------IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE 284
QM E + + ISVL + K+ H+++ K + +V +
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKAR 302
Query: 285 -VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
+ A F+ + RD+ W V+I G + D E+ +K+F QM+ G P+ T S L+
Sbjct: 303 CLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLS 362
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
CS + TL+ GRQ+HA A+K V +A++ +Y +CG ++ A F + DI+S
Sbjct: 363 GCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVS 422
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
WN+II G + HG EKALE F M PD+ TF+GVLSACS+ GLV++G+ FD M
Sbjct: 423 WNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMS 482
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
Y + P HY C+VD+LGR G +E + E+ + +W +LGAC++H N+
Sbjct: 483 KIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMN---LTPYSLIWETVLGACKLHGNV 539
Query: 524 KVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQI 583
GE A +++ E+EP Y++L+ ++ S GR +D + I A M G+KKEPGCSW+++
Sbjct: 540 DFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEV 599
Query: 584 NDGGHVFLSGDSSHPKFHRLRYLLNLL 610
+ HVFLS D SHPK + L+ L
Sbjct: 600 DGQVHVFLSQDGSHPKIREIYAKLDKL 626
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 201/461 (43%), Gaps = 40/461 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+ +A +F K+ D V W+ MI G + G A LF+ M + + FT +++++
Sbjct: 102 VYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVST 161
Query: 62 LMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+++ + + G E ++V+ N +I Y+ + +++ +VF M D+VS
Sbjct: 162 ATNMGDLRYGQSIHGCICKYGFESDNLVS-NPLIMMYMKSRCVEDGNKVFEAMTNPDLVS 220
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE---------GRIVEARKL 167
WN ++ + Q F +M ++R G+ V A +
Sbjct: 221 WNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHII 280
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
+ D L + Y C+ A F ++ +RD+ SW +I+G + + + A+
Sbjct: 281 KNSSDDDDFVGTAL-VDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAV 339
Query: 228 SYFKQMP----ETCEKTWNSIIS-----VLIRNGLVKEAHSYLEKY-PYSNIASWTNVIV 277
YF+QM + E T S +S + NG ++ H+ K + +I + ++
Sbjct: 340 KYFRQMQREGIKPNEYTLASCLSGCSHMATLENG--RQLHAVAVKAGHFGDIFVGSALVD 397
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + G + A +F+ + +RD+ WN +I G ++ GE+ L+ F M G PD AT
Sbjct: 398 LYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEAT 457
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKI-ARNQFTTVSNAMITMYARCGNIQSA--LLEFS 394
F VL+ CS + ++ G++ KI N M+ + R G +E
Sbjct: 458 FIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEM 517
Query: 395 SVPIHDIISWNSIICGLAYHG---YAEKAL-ELFERMRLTD 431
++ + +I W +++ HG + EKA +LFE + D
Sbjct: 518 NLTPYSLI-WETVLGACKLHGNVDFGEKAAKKLFEMEPMMD 557
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 123/264 (46%), Gaps = 12/264 (4%)
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN--SIISVL--- 248
+AE LF M +++ SW L+NG + F +M E CE ++ ++ +VL
Sbjct: 3 LAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKE-CETKFSKFTLSTVLKGC 61
Query: 249 -----IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+R G V A + + V + Y + G V A+KVF + DV W
Sbjct: 62 ANTGSLREGKVLHALALRSGCEIDEFLGCSLVDM-YSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
+ MI GL + G+E + F M+ G P+ T +S+++ +++ L G+ IH K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
VSN +I MY + ++ F ++ D++SWN+++ G + +
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240
Query: 424 FERMRLTDFKPDDITFVGVLSACS 447
F +M L FKP+ TF+ VL +CS
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCS 264
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 150/360 (41%), Gaps = 37/360 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
M++ +++ +F+ M D V+WN ++ G++ + +F QM + +MFT+
Sbjct: 198 MKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFI 257
Query: 57 TVIAGLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
+V+ + + K+V D +++ Y +++A F + +
Sbjct: 258 SVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNR 317
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA--SWTIM--VNGLVREGRIVEARKLF 168
D+ SW ++I + + A YF++M + +T+ ++G + R+L
Sbjct: 318 DIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLH 377
Query: 169 DKMPAK----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
D+ + ++ Y GC+ AE +F+ + RD+ SW +I+G + +
Sbjct: 378 AVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGE 437
Query: 225 AAISYFKQ------MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
A+ F+ MP+ E T+ ++S GLV+E + S I I
Sbjct: 438 KALEAFRMMLSEGIMPD--EATFIGVLSACSFMGLVEEGKKRFD--SMSKIYGINPSIEH 493
Query: 279 YFEM----GEVG--SAIKVF--ELMTTRDVTVWNVMIFGL---GENDLGEEGLKFFVQMK 327
Y M G G + +K+F E+ T +W ++ G D GE+ K +M+
Sbjct: 494 YACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEME 553
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 17/187 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ A+ +F + RD V+WN +I GY ++G + A+ F M + G++ +
Sbjct: 405 MEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSA 464
Query: 66 DNVQG----AKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLKDV 114
+ G K+ FD M + N I Y C G +E M L
Sbjct: 465 CSFMGLVEEGKKRFDSMS--KIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPY 522
Query: 115 -VSWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+ W V+GA +D E K EM +S+ ++ N +GR + R +
Sbjct: 523 SLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRAL 582
Query: 171 MPAKDVQ 177
M ++ ++
Sbjct: 583 MTSRGIK 589
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 197/655 (30%), Positives = 328/655 (50%), Gaps = 67/655 (10%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAGLMQ 64
A+ L + D V+W+ +I GY +NG + A+ + +M + + FT+++V+ G
Sbjct: 101 ARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSL 160
Query: 65 SDNVQGAKEVFD----------------------------------GMEVR--------- 81
+ N++ K++ GM+V
Sbjct: 161 TRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYD 220
Query: 82 -DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
D + N+++ Y +G + A+ VF+ +P D+VSWN VI V ++ DLA +M
Sbjct: 221 SDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKM 280
Query: 141 GARDVASWTIMVNGLVRE----GRIVEARKLFDKMPAKDVQAWNLMIAGYLD----NGCV 192
G+ VA ++ ++ G + R+L + D++ + + G +D G +
Sbjct: 281 GSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLL 340
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR-- 250
A +F M +D+ W +I+G N A+S F M + + + +S +++
Sbjct: 341 QDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKST 400
Query: 251 -----NGLVKEAHSYLEKYPYSNIASWTNVIV-GYFEMGEVGSAIKVFELMTTRDVTVWN 304
NG ++ H+ K Y N ++ Y + + A KVFE+ D+ +
Sbjct: 401 AGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYT 460
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
MI + LGEE LK +++M++ PD F+S+ C++L + G+QIH +K
Sbjct: 461 SMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKC 520
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
N+++ MYA+CG+I A F+ + I+SW+++I GLA HG+ KAL+LF
Sbjct: 521 GLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLF 580
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
+M P+ IT V VLSAC++AGLV + R +F M+ + + P HY C+VD+LGR
Sbjct: 581 YQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGR 640
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G +DEAM L+ E+ + S VWGALLGA RIH NI++G A E ++ LEP SG +
Sbjct: 641 VGRLDEAMVLVKEMP---FQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTH 697
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
++L +Y S G ++ ++ MK + VKKEPG SWI++ D + F+ GD SHP+
Sbjct: 698 ILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPR 752
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 22/277 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+Q+A+ +FD MP +D + WN +I GY G+ AM LF M + + T ++ +++S
Sbjct: 340 LQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKS 399
Query: 66 ---DNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
G E + ++ D NS++ Y L+++A +VF P +D+V++
Sbjct: 400 TAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAY 459
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV---------REGRIVEARKLF 168
+I A + A + M RD+ + + L +G+ + L
Sbjct: 460 TSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLK 519
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+ DV A N ++ Y G + A +F ++ R + SW +I GL A+
Sbjct: 520 CGL-LSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQ 578
Query: 229 YFKQMPETC----EKTWNSIISVLIRNGLVKEAHSYL 261
F QM + T S++S GLV EA +
Sbjct: 579 LFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFF 615
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 209/724 (28%), Positives = 335/724 (46%), Gaps = 132/724 (18%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMF----TYNT 57
+N I A+ +FD + +D+V+W MI G+ +NG+ + A+ LF +M +F +++
Sbjct: 159 KNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSS 218
Query: 58 VIAGLMQ-----------------------------------SDNVQGAKEVFDGMEVRD 82
V++G + N A++VF M+ +D
Sbjct: 219 VLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKD 278
Query: 83 VVTWNSMISGYVCNGLIDEALRVF----------------------------------HG 108
V++NS+ISG G D AL +F H
Sbjct: 279 EVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHS 338
Query: 109 MPLKDVVSWNLVI-GAL----VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVE 163
+K +S ++++ GAL VNC + A F +V W +M+ + + E
Sbjct: 339 YVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSE 398
Query: 164 ARKLFDKMPAK---------------------------------------DVQAWNLMIA 184
+ ++F +M K +V +++I
Sbjct: 399 SFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLID 458
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT---- 240
Y +G + A + + + + D+ SW LI+G A+ +FK+M ++
Sbjct: 459 MYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIG 518
Query: 241 WNSIISVL-----IRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFEL 294
++S IS + G A SY+ Y S S N +V Y G + A FE
Sbjct: 519 FSSAISACAGIQALNQGRQIHAQSYVSGY--SEDLSIGNALVSLYARCGRIKEAYLEFEK 576
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+ +D WN +I G ++ E+ LK F QM + TF S ++ +++ + G
Sbjct: 577 IDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQG 636
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
+QIHA IK + VSNA+IT YA+CG+I+ A EF +P + +SWN++I G + H
Sbjct: 637 KQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQH 696
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
GY +A+ LFE+M+ P+ +TFVGVLSACS+ GLV +G YF+ M ++ L P+ AH
Sbjct: 697 GYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAH 756
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM 534
Y CVVDL+ R G + A + E+ IE T+W LL AC +H N++VGE A + ++
Sbjct: 757 YACVVDLISRAGFLSRARKFIEEMP---IEPDATIWRTLLSACTVHKNVEVGEFAAQHLL 813
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
ELEP +S Y++L+ MY G+ + + M+ GVKKEPG SWI++ + H F GD
Sbjct: 814 ELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGD 873
Query: 595 SSHP 598
HP
Sbjct: 874 RLHP 877
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 155/645 (24%), Positives = 272/645 (42%), Gaps = 101/645 (15%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
++V N ++ YF G LD + +F MP R + +++ +I+G M+ ++F M
Sbjct: 44 ESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMI 103
Query: 80 VRDV----VTWNSMI---SGYVCNGLIDEALR---VFHGMPLKDVVSWNLVIGALVNCQR 129
+V +++ S++ SG+ E + + HG+ ++S N +IG
Sbjct: 104 EENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIIS-NPLIGLYAKNGL 162
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
+ A F + +D SW M++G + G EA LF +M + + + L +
Sbjct: 163 IISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVL-S 221
Query: 190 GCVGV----------------------------------------AEDLFQKMHDRDLTS 209
GC + AE +F KM +D S
Sbjct: 222 GCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVS 281
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLE 262
+ LI+GL D A+ F +M K T S++S NG + ++ HSY+
Sbjct: 282 FNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVI 341
Query: 263 KYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
K S+ ++ Y ++ +A ++F T +V +WNVM+ G+ D E +
Sbjct: 342 KAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFR 401
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F QM+ G P+ T+ S+L C+ + LDLG QIH Q IK V + +I MYA
Sbjct: 402 IFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYA 461
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+ G + +A + ++ D++SW ++I G A H +AL+ F+ M + D+I F
Sbjct: 462 KHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSS 521
Query: 442 VLSACSYAGLVDQGR-----------------------YYFDC--MKNKYFLQPR----- 471
+SAC+ ++QGR Y C +K Y +
Sbjct: 522 AISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKD 581
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
S + ++ + G ++A+ + ++ +E S +G+ + A NIK G+
Sbjct: 582 SISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHA 641
Query: 532 RVM------ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
++ ++E +N+ L Y CG EDA+R F +M E
Sbjct: 642 MIIKRGFDSDIEVSNA-----LITFYAKCGSIEDARREFCEMPEK 681
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 231/507 (45%), Gaps = 57/507 (11%)
Query: 156 VREGRIVEARKLFDKMP----AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
+ G +VE +KL K+ + N ++ Y G + +F+ M +R + SW
Sbjct: 21 LNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWD 80
Query: 212 QLINGLVNSRRIDAAISYFKQM-PETCEKTWNSIISVL-----IRNGL--VKEAHSYLEK 263
++I+G + + + + F M E T S SVL R G+ ++ H+ +
Sbjct: 81 KIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIIC 140
Query: 264 YPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ +N ++G Y + G + SA KVF+ + T+D W MI G +N EE +
Sbjct: 141 HGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHL 200
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F +M +G P F+SVL+ C+ + D+G Q+HA K + T V NA++T+Y+R
Sbjct: 201 FCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSR 260
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
N SA FS + D +S+NS+I GLA G+++ ALELF +M+ KPD +T +
Sbjct: 261 MPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASL 320
Query: 443 LSACSYAGLVDQGR-----------------------YYFDC----MKNKYFLQPRSAHY 475
LSAC+ G + +G Y +C ++ FL ++ +
Sbjct: 321 LSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENV 380
Query: 476 TCVVDLLGRFGLID---EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
+L FG +D E+ + +++ G+ + + ++L C + +GE +
Sbjct: 381 VLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQ 440
Query: 533 VMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
V++ N V +L +MY G+ + A I + E+ V SW + +
Sbjct: 441 VIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDV-----VSWTAL-------I 488
Query: 592 SGDSSHPKF-HRLRYLLNLLHTEIERE 617
SG + H F L++ +L+ I+ +
Sbjct: 489 SGYAQHNLFAEALKHFKEMLNRGIQSD 515
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 115/282 (40%), Gaps = 46/282 (16%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ G + T+ +L +C + +L +++H + +K+ + + N ++ +Y G+
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+ + F +P + SW+ II G + + L+LF M + P +I+F VL A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 446 CS-------YA-----------------------------GLVDQGRYYFD--CMKNKYF 467
CS YA GL+ R FD C K+
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKD--- 177
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
S + ++ + G +EA++L E+ GI +P V+ ++L C VGE
Sbjct: 178 ----SVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGE 233
Query: 528 IAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQMK 568
V + + + V L +Y A+++F++M+
Sbjct: 234 QLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQ 275
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/549 (34%), Positives = 301/549 (54%), Gaps = 19/549 (3%)
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
R+ +I+ + + A+ VF+ + DV+ +N +I A V LA S F EM
Sbjct: 47 RESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEM 106
Query: 141 GARDVASWTIMVNGLVREG------RIVEA-RKLFDKMP-AKDVQAWNLMIAGYLDNGCV 192
V + L++ R+VE +KM D+ N +I Y G
Sbjct: 107 QDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLD 166
Query: 193 GVA--EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
GVA +F+ M +RD SW +I GLV + A F +MPE +WN+I+ ++
Sbjct: 167 GVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVK 226
Query: 251 NGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
G + A EK P N+ SW+ +++GY + G++ A +F+ M +++ W +MI G
Sbjct: 227 AGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGY 286
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF- 369
E L ++ + + QM+E+G D+ T S+L+ C+ L LG+++HA I R +F
Sbjct: 287 AEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRVHAS---IERTRFK 343
Query: 370 --TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
T VSNA+I MYA+CG++++AL F + D++SWN+II GLA HG+ EKAL+LF RM
Sbjct: 344 CSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRM 403
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
+ F PD +TFVGVL AC++AG VD+G +YF M+ Y + P HY C+VDLLGR G
Sbjct: 404 KGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGR 463
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLIL 547
+ EA L++ + +E + +WG LLGACR+H+ + E +R+++ E ++SG +L
Sbjct: 464 LKEAFRLVHSMP---LEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSML 520
Query: 548 TEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
+ +Y + G ++ I +MK ++K G S I+++D H F D SHPK R+ +
Sbjct: 521 SNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTI 580
Query: 608 NLLHTEIER 616
+ L I +
Sbjct: 581 DGLGQHINK 589
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 207/463 (44%), Gaps = 68/463 (14%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------------------ 50
A N+F+++ D + +N +IR + +N A +F +M +
Sbjct: 68 AVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSG 127
Query: 51 ---------------------DMFTYNTVIAGLMQS--DNVQGAKEVFDGMEVRDVVTWN 87
D+F N++I + D V A++VF+ M RD V+WN
Sbjct: 128 KVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWN 187
Query: 88 SMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVAS 147
SMI G V G + EA R+F MP +D VSWN ++ V M+ A F++M AR+V S
Sbjct: 188 SMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVS 247
Query: 148 WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL 207
W+ MV G + G + AR LFDKMP K++ W +MI+GY + G A +L+ +M + L
Sbjct: 248 WSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGL 307
Query: 208 TSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS 267
+ +G V S A+S GL K H+ +E+ +
Sbjct: 308 ----KFDDGTVISILSACAVSGLL--------------------GLGKRVHASIERTRFK 343
Query: 268 NIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
+N ++ Y + G + +A+ +F M +DV WN +I GL + GE+ L+ F +M
Sbjct: 344 CSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRM 403
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQ-IHAQAIKIARNQFTTVSNAMITMYARCGN 385
K G PD TF VL C+ +D G HA M+ + R G
Sbjct: 404 KGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGR 463
Query: 386 IQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERM 427
++ A S+P+ + I W +++ H A E+F+R+
Sbjct: 464 LKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRL 506
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 162/347 (46%), Gaps = 53/347 (15%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ A+ +F+ M +RDTV+WN MI G K G L A LF++MPERD ++NT++ G +++
Sbjct: 168 VAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKA 227
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG--- 122
+ A E+F+ M R+VV+W++M+ GY G +D A +F MP+K++V W ++I
Sbjct: 228 GEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYA 287
Query: 123 -------ALVNCQRMDLAESYFKE-----------------MGARDVASW--------TI 150
A+ +M+ A F + +G R AS T
Sbjct: 288 EKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTP 347
Query: 151 MVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR- 205
+ N L+ + G + A +F M KDV +WN +I G +G A LF +M
Sbjct: 348 VSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEG 407
Query: 206 ---DLTSWKQLINGLVNSRRIDAAISYFKQM-------PETCEKTWNSIISVLIRNGLVK 255
D ++ ++ ++ +D + YF M PE + + ++ +L R G +K
Sbjct: 408 FVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEV--EHYGCMVDLLGRGGRLK 465
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEM-GEVGSAIKVFELMTTRDVT 301
EA + P A ++G M G A +VF+ + +++
Sbjct: 466 EAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSELS 512
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 103/245 (42%), Gaps = 33/245 (13%)
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
S L CS L + +QIHAQ +K ++ + V +I ++ C + A+ F+ +
Sbjct: 22 SDLHRCSSLNQV---KQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDP 78
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS----------YA 449
D++ +N++I + A +F M+ + D+ T+ +L ACS
Sbjct: 79 DVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIH 138
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
V++ + D + +++ C +D + A + E+ A+ VS
Sbjct: 139 AQVEKMGFCLDIFVPNSLID---SYFKCGLDGVA-------AARKVFEVMAERDTVS--- 185
Query: 510 WGALLGACRIHNNIKVGEIAGERVM--ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
W +++G +KVGE+ R + E+ ++ + + + Y+ G A +F +M
Sbjct: 186 WNSMIGGL-----VKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKM 240
Query: 568 KENGV 572
V
Sbjct: 241 PARNV 245
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 188/621 (30%), Positives = 325/621 (52%), Gaps = 27/621 (4%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
DT ++ Y N +A + + +PE ++F+++T+I + A F M
Sbjct: 47 DTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQML 106
Query: 80 VRDVVTWNSMISGYV--CNGLID-EALRVFHGMPL-----KDVVSWNLVIGALVNCQRMD 131
R ++ N ++ V C GL + R HG+ D + ++ + C ++
Sbjct: 107 TRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIR 166
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ----AWNLMIAGYL 187
A F M DV SW+ +V R+G + EA++LF +M VQ +WN MIAG+
Sbjct: 167 DAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFN 226
Query: 188 DNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAI---SYFKQMPETCEKT 240
+G A +F MH R D T+ ++ + + + I Y + +K
Sbjct: 227 HSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKC 286
Query: 241 WNS-IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR- 298
+S +I + + E ++ + ++ S I G G+V S++++F + +
Sbjct: 287 VSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQG 346
Query: 299 ---DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+V W MI +N E L+ F +M+ +G P++ T +L C ++ L G+
Sbjct: 347 MELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGK 406
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
H +++ + V +A+I MYA+CG IQ++ + F +P +++ WN++I G A HG
Sbjct: 407 AAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHG 466
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
A++A+E+F+ M+ + KPD I+F VLSACS +GL ++G YYF+ M +KY ++ R HY
Sbjct: 467 KAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHY 526
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
C+V LL R G +++A + IR + VWGALL +CR+HNN+ +GE+A E++ E
Sbjct: 527 ACMVTLLSRAGKLEQAYAM---IRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFE 583
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
LEP+N G Y++L+ +Y S G + R+ MK G++K PGCSWI++ + H+ L+GD
Sbjct: 584 LEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDK 643
Query: 596 SHPKFHRLRYLLNLLHTEIER 616
SHP+ ++ L+ L E+++
Sbjct: 644 SHPQMTQIIENLDKLSMEMKK 664
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 200/448 (44%), Gaps = 56/448 (12%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
+I++A +FD+M + D V+W+ ++ Y + G +D A LF++M +
Sbjct: 164 QIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGD--------------- 208
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLV 120
VQ ++++WN MI+G+ +GL EA+ +F M L+ D + + V
Sbjct: 209 -SGVQ-----------PNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSV 256
Query: 121 IGALVNCQRM---DLAESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
+ A+ + + + L Y + G D + +++ + E ++FD+M DV
Sbjct: 257 LPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDV 316
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQ 232
+ N I G NG V + LF+++ D+ ++ SW +I + R A+ F++
Sbjct: 317 GSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFRE 376
Query: 233 MPETCEKTWNSIISVLIR-----NGLV--KEAHSY-LEKYPYSNIASWTNVIVGYFEMGE 284
M K + I L+ L+ K AH + L + +++ + +I Y + G
Sbjct: 377 MQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGR 436
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+ ++ F+ + T+++ WN +I G + +E ++ F M+ SG PD +FT VL+
Sbjct: 437 IQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSA 496
Query: 345 CSDLPTLDLGR-QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DII 402
CS + G ++ + K M+T+ +R G ++ A +P++ D
Sbjct: 497 CSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDAC 556
Query: 403 SWNSIICGLAYHG-------YAEKALEL 423
W +++ H AEK EL
Sbjct: 557 VWGALLSSCRVHNNVSLGEVAAEKLFEL 584
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/555 (32%), Positives = 310/555 (55%), Gaps = 27/555 (4%)
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVI 121
D + A +F+ ++ +++ WN+M G+ N AL+++ M L + S+ ++
Sbjct: 13 DGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLL 72
Query: 122 G------ALVNCQRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
AL+ Q++ + ++G D+ T +++ + GR+ +A K+FD+ +
Sbjct: 73 KSCAKSKALIEGQQI---HGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHR 129
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
V ++ +I GY G + A LF ++ +D+ SW +I+G V + A+ +K M
Sbjct: 130 HVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMM 189
Query: 235 ETC----EKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVG 286
+T E T +++S ++G L ++ HS++E + + + NV++ Y + GEV
Sbjct: 190 KTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVE 249
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
+A +F+ + +DV WN +I G +L +E L F +M SG SP++ T SVL C+
Sbjct: 250 TACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACA 309
Query: 347 DLPTLDLGRQIHAQAIKIAR--NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
L +D+GR IH K + +++ ++I MYA+CG+I++A F S+ + SW
Sbjct: 310 HLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSW 369
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
N++I G A HG A A +LF +MR PDDITFVG+LSACS++G++D GR+ F M
Sbjct: 370 NAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQ 429
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
Y + P+ HY C++DLLG GL EA + IR +E +W +LL AC++HNN++
Sbjct: 430 DYKITPKLEHYGCMIDLLGHCGLFKEAKEM---IRTMPMEPDGVIWCSLLKACKMHNNVE 486
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIN 584
+GE + ++++EP N G Y++L+ +Y + GR + +I + + G+KK PGCS I+I+
Sbjct: 487 LGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEID 546
Query: 585 DGGHVFLSGDSSHPK 599
H F+ GD HP+
Sbjct: 547 SVVHEFIIGDKFHPR 561
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 185/390 (47%), Gaps = 24/390 (6%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
DM+ ++I+ Q+ ++ A +VFD R VV++ ++I+GY G I+ A ++F +
Sbjct: 99 DMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEIS 158
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNGLVREGRIVEARK 166
+KDVVSWN +I V A +K+M +V ++ +V+ + G I R+
Sbjct: 159 VKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQ 218
Query: 167 LF----DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
L D +++ N++I Y G V A LFQ + +D+ SW LI G +
Sbjct: 219 LHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNL 278
Query: 223 IDAAISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEK--YPYSNIAS-W 272
A+ F++M + E T S++ G + + H Y+ K +N +S
Sbjct: 279 YKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLL 338
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T++I Y + G++ +A +VF+ M TR ++ WN MIFG + F +M+++G
Sbjct: 339 TSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGID 398
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIH---AQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
PD+ TF +L+ CS LDLGR I +Q KI MI + CG + A
Sbjct: 399 PDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPK--LEHYGCMIDLLGHCGLFKEA 456
Query: 390 LLEFSSVPIH-DIISWNSIICGLAYHGYAE 418
++P+ D + W S++ H E
Sbjct: 457 KEMIRTMPMEPDGVIWCSLLKACKMHNNVE 486
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 147/353 (41%), Gaps = 89/353 (25%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N R+++A +FD+ R V++ +I GY G+++NA LF+++ +D+ ++N +I+G
Sbjct: 112 QNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISG 171
Query: 62 LMQSDNVQGAKEVFDGMEV--------------------------RDVVTW--------- 86
+++ N + A E++ M R + +W
Sbjct: 172 YVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSN 231
Query: 87 ----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM-- 140
N +I Y G ++ A +F G+ KDV+SWN +IG + A F+EM
Sbjct: 232 IKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLR 291
Query: 141 --------------------GARDVASW-------------------TIMVNGLVREGRI 161
GA D+ W T +++ + G I
Sbjct: 292 SGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDI 351
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGL 217
A+++FD M + + +WN MI G+ +G A DLF KM D D ++ L++
Sbjct: 352 EAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSAC 411
Query: 218 VNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVKEAHSYLEKYP 265
+S +D F+ M + + T + +I +L GL KEA + P
Sbjct: 412 SHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMP 464
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 178/536 (33%), Positives = 285/536 (53%), Gaps = 24/536 (4%)
Query: 99 IDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV-- 156
+ EA+ H +P ++ +I A + ++++L + A + ++ N L+
Sbjct: 48 LKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHM 107
Query: 157 --REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLI 214
+ G +V+A+ LFD++P KD+ +WN MI+GY + G + A LF +M RD SW +I
Sbjct: 108 YAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVI 167
Query: 215 NGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI----------RNGLVKEAHSYLEKY 264
+G V+ A+ F+ M E N R G KE H YL +
Sbjct: 168 SGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRG--KEIHGYLIRS 225
Query: 265 PYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
+ WT ++ Y + G + A +F+ M +D+ W MI E+ +EG F
Sbjct: 226 GLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLF 285
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
+ SG P+ TF VL C+DL +G+++H ++ + F+ ++A++ +Y++C
Sbjct: 286 RDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKC 345
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
GN ++A F+ +P D++SW S+I G A +G + AL+ FE + + KPD+ITFVGVL
Sbjct: 346 GNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVL 405
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
SAC++AGLVD G YF +K K+ L + HY CV+DLL R G EA N++ D +
Sbjct: 406 SACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENII-----DNM 460
Query: 504 EVSPT--VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
+ P +W +LLG CRIH NI++ E A + + ELEP N Y+ L+ +Y + G +
Sbjct: 461 PMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEET 520
Query: 562 RIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
++ M G+ K+PG SWI+I HVFL GD+SHPK + L L +++ E
Sbjct: 521 KVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEE 576
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 204/446 (45%), Gaps = 45/446 (10%)
Query: 22 VTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
V N +I Y K G L +A LF+++P++D+ ++NT+I+G ++ A+++FD M R
Sbjct: 99 VISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHR 158
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI--------GALVNCQRMDLA 133
D +WN++ISGYV G EAL +F M + + N+ A+ + +R
Sbjct: 159 DNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEI 218
Query: 134 ESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
Y G D WT +++ + G + EAR +FD+M KD+ +W MI ++G
Sbjct: 219 HGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRK 278
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
LF+ + + + G++N+ + L
Sbjct: 279 KEGFSLFRDLMGSGVRPNEYTFAGVLNA------------------------CADLAAEQ 314
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
+ KE H Y+ + Y + + +V Y + G +A +VF M D+ W +I G
Sbjct: 315 MGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYA 374
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+N + L+FF + SG PD TF VL+ C+ +D+G + + ++K T
Sbjct: 375 QNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLE-YFHSVKEKHGLVHT 433
Query: 372 VSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERM- 427
+ +I + AR G + A ++P+ D W S++ G HG +EL ER
Sbjct: 434 ADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHG----NIELAERAA 489
Query: 428 -RLTDFKPDD-ITFVGVLSACSYAGL 451
L + +P++ T++ + + + AGL
Sbjct: 490 KALFELEPENPATYITLSNIYANAGL 515
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 144/320 (45%), Gaps = 59/320 (18%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERD-----MFTYNTV 58
RI++A+ LFD+MP RD +WN +I GY G+ A+ LF M E + MFT ++
Sbjct: 143 GRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSA 202
Query: 59 IAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+A +++ KE+ G+E+ +VV W +++ Y G ++EA +F M KD
Sbjct: 203 LAAAAAISSLRRGKEIHGYLIRSGLELDEVV-WTALLDLYGKCGSLNEARGIFDQMADKD 261
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM---GAR--------------DVAS--------- 147
+VSW +I R S F+++ G R D+A+
Sbjct: 262 IVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHG 321
Query: 148 ---------WTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
++ + LV + G AR++F++MP D+ +W +I GY NG +
Sbjct: 322 YMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDM 381
Query: 195 A----EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-----CEKTWNSII 245
A E L + D ++ +++ ++ +D + YF + E + +I
Sbjct: 382 ALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVI 441
Query: 246 SVLIRNGLVKEAHSYLEKYP 265
+L R+G KEA + ++ P
Sbjct: 442 DLLARSGRFKEAENIIDNMP 461
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 189/625 (30%), Positives = 313/625 (50%), Gaps = 69/625 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++E + +FD M +++ WN M+ Y K G ++CLF M E+ + +
Sbjct: 150 LKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI-----------EG 198
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGAL 124
+ A E+FD + RDV++WNSMISGYV NGL + L ++ M + V +I L
Sbjct: 199 KRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVL 258
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
V C +G + G+ V + + + + N ++
Sbjct: 259 VGCAN-----------------------SGTLSLGKAVHSLAIKSTFERR-INFSNTLLD 294
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----T 240
Y G + A +F+KM +R++ SW +I G R D AI +QM + K
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVA 354
Query: 241 WNSIISVLIRNGLV---KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
SI+ R+G + K+ H Y++ SN+ ++ Y + G + A VF M
Sbjct: 355 TTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMV 414
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+D+ WN MI L PD+ T +L C+ L L+ G++
Sbjct: 415 VKDIISWNTMIGEL---------------------KPDSRTMACILPACASLSALERGKE 453
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
IH ++ + V+NA++ +Y +CG + A L F +P D++SW +I G HGY
Sbjct: 454 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGY 513
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
+A+ F MR +PD+++F+ +L ACS++GL++QG +F MKN + ++P+ HY
Sbjct: 514 GNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYA 573
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
C+VDLL R G + +A + + I T+WGALL CRI+++I++ E ERV EL
Sbjct: 574 CMVDLLSRTGNLSKAYEFIETL---PIAPDATIWGALLCGCRIYHDIELAEKVAERVFEL 630
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSG-DS 595
EP N+G Y++L +Y + E+ KR+ ++ + G++K PGCSWI+I ++F+SG +S
Sbjct: 631 EPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNS 690
Query: 596 SHPKFHRLRYLLNLLHTEIEREILF 620
SHP ++ LL + +++ E F
Sbjct: 691 SHPHSKKIESLLKKMRRKMKEEGYF 715
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 217/466 (46%), Gaps = 49/466 (10%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIA 60
R + A LFDK+ RD ++WN MI GY NG + + ++ QM + D+ T +V+
Sbjct: 200 RPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLV 259
Query: 61 GLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
G S + K V R + N+++ Y G +D ALRVF M ++VVS
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319
Query: 117 WNLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKLFDKMP 172
W +I R D A ++M G + DV + T +++ R G + + + D +
Sbjct: 320 WTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIK 379
Query: 173 AKDVQA----WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
A ++++ N ++ Y G + A +F M +D+ SW +I L R A I
Sbjct: 380 ANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACI- 438
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGS 287
+P + +S L R KE H Y+ + YS+ N +V Y + G +G
Sbjct: 439 ----LPAC------ASLSALERG---KEIHGYILRNGYSSDRHVANALVDLYVKCGVLGL 485
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A +F+++ ++D+ W VMI G G + G E + F +M+++G PD +F S+L CS
Sbjct: 486 ARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSH 545
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLEFSSVPIH-DI 401
L+ G + I +N F M+ + +R GN+ A ++PI D
Sbjct: 546 SGLLEQGWRF----FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDA 601
Query: 402 ISWNSIICGLA-YHGYAEKALELFERM--RLTDFKPDDITFVGVLS 444
W +++CG YH +EL E++ R+ + +P++ + +L+
Sbjct: 602 TIWGALLCGCRIYHD-----IELAEKVAERVFELEPENTGYYVLLA 642
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 136/545 (24%), Positives = 228/545 (41%), Gaps = 111/545 (20%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCL--FNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFD 76
R +N I + + G L+NAM L Q E + TY++V+ G+K + D
Sbjct: 64 RQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETKTYSSVL------QLCAGSKSLTD 117
Query: 77 GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESY 136
G +V ++ N N +DE L G+ L + C
Sbjct: 118 GKKVHSIIKSN--------NVAVDEVL----GLKL---------VSLYATC--------- 147
Query: 137 FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY---------- 186
G + E R++FD M K+V WN M++ Y
Sbjct: 148 ----------------------GDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI 185
Query: 187 ------LDNGCVG----VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
++ G G A +LF K+ DRD+ SW +I+G V++ + + +KQM
Sbjct: 186 CLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYL 245
Query: 237 -CEKTWNSIISVLIRNG------LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSA 288
+ +IISVL+ L K HS K + +++N ++ Y + G++ A
Sbjct: 246 GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGA 305
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
++VFE M R+V W MI G + + ++ QM++ G D TS+L C+
Sbjct: 306 LRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARS 365
Query: 349 PTLDLGRQIH--AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
+LD G+ +H +A + N F V NA++ MY +CG++ A FS++ + DIISWN+
Sbjct: 366 GSLDNGKDVHDYIKANNMESNLF--VCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNT 423
Query: 407 IICGL--------------AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
+I L A E+ E+ + + D ++ G++
Sbjct: 424 MIGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVL 483
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
R FD + +K + +T ++ G G +EA+ NE+R GIE + +
Sbjct: 484 GLARLLFDMIPSKDLVS-----WTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 513 LLGAC 517
+L AC
Sbjct: 539 ILYAC 543
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 195/617 (31%), Positives = 319/617 (51%), Gaps = 27/617 (4%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMC----LFNQMPERDMFTYNTVIAG 61
+Q+A LFD+MPQ +T+++ + +GY ++ A+ +F + E + F + T++
Sbjct: 86 LQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKL 145
Query: 62 LMQSDNVQGA----KEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
L+ D V+ D ++I Y G +D A VF + KD+VSW
Sbjct: 146 LVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSW 205
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA---- 173
++ + + F +M ++G ++ +EA + +
Sbjct: 206 TGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALK 265
Query: 174 ----KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
D+ ++ Y +G + A+ LF++M DL W +I S R A+
Sbjct: 266 GCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDL 325
Query: 230 FKQMPETC----EKTWNSIISVLIRN---GLVKEAHSYLEKYPYSNIASWTNVIVG-YFE 281
F +M +T T+ S++ + L K+ HS + K+ ++ +N I+ Y +
Sbjct: 326 FLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAK 385
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
GE+ +++K+FE + R+ WN +I G + GE + F M E P T++SV
Sbjct: 386 CGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSV 445
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L + L L+ G QIH+ IK N+ T V+N++I MYA+CG I A L F + D
Sbjct: 446 LRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDE 505
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
+SWN++ICG + HG + +AL LF+ M+ TD KP+ +TFVGVLSACS AGL+ +G+ +F+
Sbjct: 506 VSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFES 565
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
M Y ++P HYTC+V LLGR G DEAM L+ EI + S VW ALLGAC IH
Sbjct: 566 MSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEI---AYQPSVMVWRALLGACVIHK 622
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
+ +G + + V+E+EP++ +++L+ MY + GR ++ + M++ V+KEPG SW+
Sbjct: 623 KVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWV 682
Query: 582 QINDGGHVFLSGDSSHP 598
+ H F GD+SHP
Sbjct: 683 ENQGVVHYFSVGDTSHP 699
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/402 (20%), Positives = 170/402 (42%), Gaps = 45/402 (11%)
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV----KEAHSY 260
RD T QL++ N I + + + ++ ++ +IRNG K H +
Sbjct: 8 RDSTKLSQLLHQCRN-------IHHQQCLSALDSHSYAHMLQQIIRNGADPIAGKHLHCH 60
Query: 261 LEKYPYSNIASWTNVIVGYF-EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+ K S N+++ ++ + + A K+F+ M + + + G + +
Sbjct: 61 ILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQA 120
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
L F +++ + G + FT++L + + L +HA K+ + V A+I
Sbjct: 121 LHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDA 180
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y+ GN+ A F + D++SW ++ A + + E++L+LF +MR+ +KP++ T
Sbjct: 181 YSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTI 240
Query: 440 VGVLSAC----------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD--------- 480
G L +C S G +G Y D L+ A ++D
Sbjct: 241 SGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLE-LYAKSGEIIDAQRLFEEMP 299
Query: 481 ---------LLGRFGLID---EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
++ R+ D EA++L +R + + + ++L AC ++ +G+
Sbjct: 300 KTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQ 359
Query: 529 AGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
V++ N N V + ++Y CG E++ ++F ++ +
Sbjct: 360 IHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPD 401
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 154/362 (42%), Gaps = 63/362 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
++ I +AQ LF++MP+ D + W++MI Y ++ A+ LF +M + + N A
Sbjct: 284 KSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFAS 343
Query: 62 LMQS---------------------------------------DNVQGAKEVFDGMEVRD 82
++Q+ ++ + ++F+ + R+
Sbjct: 344 VLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRN 403
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMD----LAE 134
VTWN++I GYV G + A+ +F M D+ V+++ V+ A + ++ +
Sbjct: 404 DVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHS 463
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
K M +D +++ + GRI +AR FDKM +D +WN MI GY +G
Sbjct: 464 LTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSME 523
Query: 195 AEDLFQKMHDRDLTSWKQLINGLV----NSRRIDAAISYFKQMP-----ETCEKTWNSII 245
A +LF M D K G++ N+ + ++F+ M + C + + ++
Sbjct: 524 ALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMV 583
Query: 246 SVLIRNGLVKEAHSYLEKYPYS-NIASW-----TNVIVGYFEMGEVGSAIKVFELMTTRD 299
+L R G EA + + Y ++ W VI ++G V A V E+ D
Sbjct: 584 WLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRV-CAQHVLEMEPHDD 642
Query: 300 VT 301
T
Sbjct: 643 AT 644
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 17/174 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
+ RI +A+ FDKM +RD V+WN MI GY +G A+ LF+ M D T+
Sbjct: 486 KCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVG 545
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN-------GLIDEALRVFHGMP 110
V++ + + + F+ M +D I Y C G DEA+++ +
Sbjct: 546 VLSACSNAGLLYKGQAHFESMS-KD-YDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIA 603
Query: 111 LK-DVVSWNLVIGALVNCQRMDLAE---SYFKEMGARDVASWTIMVNGLVREGR 160
+ V+ W ++GA V +++DL + EM D A+ ++ N GR
Sbjct: 604 YQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGR 657
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 192/620 (30%), Positives = 327/620 (52%), Gaps = 30/620 (4%)
Query: 6 IQEAQNLFDKMP-QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIA 60
+ EA+ +FD+ +R+TV+WN ++ Y KN +A+ +F +M + + F ++ V+
Sbjct: 151 VDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVN 210
Query: 61 GLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
S +++ ++V M +R DV T N+++ Y G I A VF +P DVV
Sbjct: 211 ACTGSRDLEAGRKVH-AMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVV 269
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLFDKM 171
SWN I V A +M + +V + + ++ G R++ M
Sbjct: 270 SWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFM 329
Query: 172 PAKDVQAWNLMIAGYLD----NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
+ + N + G +D +G + A+ +F + RDL W LI+G + + A+
Sbjct: 330 VKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEAL 389
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEA-------HSYLEKYPYSNIASWTN-VIVGY 279
S F +M + + ++ ++++ EA H+ EK + + + N +I Y
Sbjct: 390 SLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSY 449
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
++ + A +VFE + D+ + MI L + D GE+ +K F++M G PD +
Sbjct: 450 WKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLS 509
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
S+L C+ L + G+Q+HA IK NA++ YA+CG+I+ A L FS +P
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEK 569
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
++SW+++I GLA HG+ ++AL++F RM P+ IT VL AC++AGLVD+ + YF
Sbjct: 570 GVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYF 629
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
+ MK + ++ HY C++DLLGR G +D+AM L+N + + + VWGALL A R+
Sbjct: 630 NSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMP---FQTNAAVWGALLAASRV 686
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
H + ++G +A E++ LEP SG +++L Y S G +D ++ MK++ VKKEP S
Sbjct: 687 HRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMS 746
Query: 580 WIQINDGGHVFLSGDSSHPK 599
W+++ D H F+ GD SHP+
Sbjct: 747 WVELKDKVHTFIVGDKSHPR 766
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 147/596 (24%), Positives = 256/596 (42%), Gaps = 50/596 (8%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDN 67
A+ +FD++P V+W+ ++ Y N +A+ F M + V+ +++
Sbjct: 55 SARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAP 114
Query: 68 VQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPL-KDVVSWNLVI 121
G + + D+ N++++ Y G +DEA VF ++ VSWN ++
Sbjct: 115 DAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLM 174
Query: 122 GALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGL-----VREGRIVEA---RKLFD 169
A V R A F EM V ++ +VN + GR V A R +D
Sbjct: 175 SAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYD 234
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
KDV N ++ Y G + +A +F K+ + D+ SW I+G V A+
Sbjct: 235 ----KDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALEL 290
Query: 230 FKQMPETCEK----TWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
QM + T +SI+ +G L ++ H ++ K +N S + G +M
Sbjct: 291 LLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVK---ANADSDNYIAFGLVDM 347
Query: 283 ----GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
G + A KVF+ + RD+ +WN +I G E L F +M++ G + T
Sbjct: 348 YAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTL 407
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+VL + L + RQ+HA A K+ + V N +I Y +C + A F
Sbjct: 408 AAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGS 467
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
+DII++ S+I L+ + E A++LF M PD +L+AC+ +QG+
Sbjct: 468 YDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQV 527
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
+ + F+ A +V + G I++A + + G+ W A++G
Sbjct: 528 HAHLIKRQFMSDVFAG-NALVYTYAKCGSIEDADLAFSGLPEKGV----VSWSAMIGGLA 582
Query: 519 IHNNIKVGEIAGERVME--LEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKE 569
H + K R+++ + PN ++ +T + +C G ++AKR F MKE
Sbjct: 583 QHGHGKRALDVFHRMVDEHISPN----HITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 134/566 (23%), Positives = 239/566 (42%), Gaps = 58/566 (10%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA 146
N ++S Y L A RVF +P VSW+ ++ A N A F+ M + V
Sbjct: 41 NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVR 100
Query: 147 SWTIMVNGLVR------EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
++ +++ G + A + + D+ N ++A Y G V A +F
Sbjct: 101 CNEFVLPVVLKCAPDAGFGTQLHALAMATGL-GGDIFVANALVAMYGGFGFVDEARMVFD 159
Query: 201 KMH-DRDLTSWKQLINGLVNSRRIDAAISYFKQM----PETCEKTWNSIISVLIRNGLV- 254
+ +R+ SW L++ V + R A+ F +M + E ++ +++ + +
Sbjct: 160 EAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLE 219
Query: 255 --KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
++ H+ + + Y N +V Y ++G++ A VF + DV WN I G
Sbjct: 220 AGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCV 279
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+ + L+ +QMK SG P+ T +S+L C+ +LGRQIH +K +
Sbjct: 280 LHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNY 339
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
++ ++ MYA+ G + A F +P D++ WN++I G ++ +AL LF RMR
Sbjct: 340 IAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEG 399
Query: 432 FKPDDITFVGVLSACS--------------------------YAGLVDQGRYYFDCMKNK 465
F + T VL + + GL+D + DC+
Sbjct: 400 FDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDS-YWKCDCLNYA 458
Query: 466 YFLQPRSAHY-----TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
Y + + Y T ++ L + ++A+ L E+ G++ P V +LL AC
Sbjct: 459 YRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASL 518
Query: 521 NNIKVGEIAGERVMELEPNN---SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
+ + G+ +++ + + +G L+ T Y CG EDA F+ + E GV
Sbjct: 519 SAYEQGKQVHAHLIKRQFMSDVFAGNALVYT--YAKCGSIEDADLAFSGLPEKGV----- 571
Query: 578 CSWIQINDGGHVFLSGDSSHPKFHRL 603
SW + G G + FHR+
Sbjct: 572 VSWSAMIGGLAQHGHGKRALDVFHRM 597
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 134/336 (39%), Gaps = 61/336 (18%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
++ + +A+ +FD +PQRD V WN +I G A+ LF +M + T +A
Sbjct: 350 KHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAA 409
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMIS-GYVCNGLIDE---------ALRVFHGMPL 111
+++S + + D +V + +S +V NGLID A RVF
Sbjct: 410 VLKS--TASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGS 467
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGAR---------------------------- 143
D++++ +I AL C + A F EM +
Sbjct: 468 YDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQV 527
Query: 144 -----------DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
DV + +V + G I +A F +P K V +W+ MI G +G
Sbjct: 528 HAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHG 587
Query: 193 GVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMPET-----CEKTWNS 243
A D+F +M D ++ + ++ ++ +D A YF M E E+ +
Sbjct: 588 KRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYAC 647
Query: 244 IISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVG 278
+I +L R G + +A + P+ +N A W ++
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAA 683
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 97/246 (39%), Gaps = 22/246 (8%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T +LT + +L G IHA +K F N +++ Y++C SA F +
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLK--SGLFAVFRNHLLSFYSKCRLPGSARRVFDEI 63
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
P +SW+S++ + + AL F MR + ++ VL AG Q
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQ-- 121
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
+ L +V + G FG +DEA + +E G E + W L+ A
Sbjct: 122 --LHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEA---GCERNTVSWNGLMSA 176
Query: 517 C----RIHNNIKV-GEIAGERVMELEPNNSGVYLILTEMYLSCGRR--EDAKRIFAQMKE 569
R + +KV GE+ V +PN G ++ G R E +++ A +
Sbjct: 177 YVKNDRCSHAVKVFGEMVWGGV---QPNEFGFSCVVNA---CTGSRDLEAGRKVHAMVIR 230
Query: 570 NGVKKE 575
G K+
Sbjct: 231 TGYDKD 236
>gi|297607983|ref|NP_001061009.2| Os08g0153600 [Oryza sativa Japonica Group]
gi|255678154|dbj|BAF22923.2| Os08g0153600 [Oryza sativa Japonica Group]
Length = 551
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 277/488 (56%), Gaps = 8/488 (1%)
Query: 128 QRMDL--AESYFKEMGARDVASWTIMVNGLVRE-GRIVEARKLFDKMPAKDVQAWNLMIA 184
+R DL AE F + A++ ++ G R GR+ +AR LFD++P D ++N +++
Sbjct: 29 RRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLS 88
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI 244
+ +G A LF M RD+ SW +++GL S ++ A + F MP +WN++
Sbjct: 89 CHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAM 148
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+S + + A + P A WT ++ GY ++G V AI+ FE M R++ W
Sbjct: 149 VSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSW 208
Query: 304 NVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
N ++ G +N ++ L+ F M +E+ P+ +T +SVL CS+L L G+QIH +
Sbjct: 209 NAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCM 268
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
K+ ++ TV ++++MY +CG++ SA F + D+++WN++I G A HG ++A+
Sbjct: 269 KLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAIN 328
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
LFERM+ +P+ ITFV VL+AC + GL D G F+ M+ Y ++PR HY+C+VDLL
Sbjct: 329 LFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLL 388
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
R G ++ A++L IR+ E P+ +G LL ACR++ N++ E+A +++E +P ++G
Sbjct: 389 CRAGKLERAVDL---IRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAG 445
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHR 602
Y+ L +Y + +D R+ MK+N V K PG SWI+I H F S D HP+ +
Sbjct: 446 AYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYL 505
Query: 603 LRYLLNLL 610
+ L L
Sbjct: 506 IHEKLGQL 513
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 200/401 (49%), Gaps = 27/401 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN-GFLDNAMCLFNQMPERDMFTYNTVI 59
+R + A+ F P++ T T+N ++ GY + G L +A LF+++P D +YNT++
Sbjct: 28 VRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLL 87
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+ S + GA+ +F M VRDVV+WN+M+SG +G ++EA VF MP+++ VSWN
Sbjct: 88 SCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNA 147
Query: 120 VIGALVNCQRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
++ + M AE +F+ + D WT MV+G + G +V+A + F+ MP +++ +
Sbjct: 148 MVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVS 207
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
WN ++AGY+ N A LF+ M V + S + C
Sbjct: 208 WNAVVAGYVKNSHADDALRLFRTM---------------VREANVQPNASTLSSVLLGC- 251
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
S +S L G K+ H + K P S N+ T+++ Y + G++ SA K+F M T
Sbjct: 252 ----SNLSAL---GFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHT 304
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG-RQ 356
RDV WN MI G ++ G+E + F +MK+ G P+ TF +VLT C D G R
Sbjct: 305 RDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRC 364
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+ M+ + R G ++ A+ S+P
Sbjct: 365 FEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMP 405
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 188/621 (30%), Positives = 325/621 (52%), Gaps = 27/621 (4%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
DT ++ Y N +A + + +PE ++F+++T+I + A F M
Sbjct: 47 DTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQML 106
Query: 80 VRDVVTWNSMISGYV--CNGLID-EALRVFHGMPL-----KDVVSWNLVIGALVNCQRMD 131
R ++ N ++ V C GL + R HG+ D + ++ + C ++
Sbjct: 107 TRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIR 166
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ----AWNLMIAGYL 187
A F M DV SW+ +V R+G + EA++LF +M VQ +WN MIAG+
Sbjct: 167 DAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFN 226
Query: 188 DNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAI---SYFKQMPETCEKT 240
+G A +F MH R D T+ ++ + + + I Y + +K
Sbjct: 227 HSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKC 286
Query: 241 WNS-IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR- 298
+S +I + + E ++ + ++ S I G G+V S++++F + +
Sbjct: 287 VSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQG 346
Query: 299 ---DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+V W MI +N E L+ F +M+ +G P++ T +L C ++ L G+
Sbjct: 347 MELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGK 406
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
H +++ + V +A+I MYA+CG IQ++ + F +P +++ WN++I G A HG
Sbjct: 407 AAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHG 466
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
A++A+E+F+ M+ + KPD I+F VLSACS +GL ++G YYF+ M +KY ++ R HY
Sbjct: 467 KAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHY 526
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
C+V LL R G +++A + IR + VWGALL +CR+HNN+ +GE+A E++ E
Sbjct: 527 ACMVTLLSRAGKLEQAYAM---IRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFE 583
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
LEP+N G Y++L+ +Y S G + R+ MK G++K PGCSWI++ + H+ L+GD
Sbjct: 584 LEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDK 643
Query: 596 SHPKFHRLRYLLNLLHTEIER 616
SHP+ ++ L+ L E+++
Sbjct: 644 SHPQMTQIIEKLDKLSMEMKK 664
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 200/448 (44%), Gaps = 56/448 (12%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
+I++A +FD+M + D V+W+ ++ Y + G +D A LF++M +
Sbjct: 164 QIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGD--------------- 208
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLV 120
VQ ++++WN MI+G+ +GL EA+ +F M L+ D + + V
Sbjct: 209 -SGVQ-----------PNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSV 256
Query: 121 IGALVNCQRM---DLAESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
+ A+ + + + L Y + G D + +++ + E ++FD+M DV
Sbjct: 257 LPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDV 316
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQ 232
+ N I G NG V + LF+++ D+ ++ SW +I + R A+ F++
Sbjct: 317 GSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFRE 376
Query: 233 MPETCEKTWNSIISVLIR-----NGLV--KEAHSY-LEKYPYSNIASWTNVIVGYFEMGE 284
M K + I L+ L+ K AH + L + +++ + +I Y + G
Sbjct: 377 MQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGR 436
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+ ++ F+ + T+++ WN +I G + +E ++ F M+ SG PD +FT VL+
Sbjct: 437 IQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSA 496
Query: 345 CSDLPTLDLGR-QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DII 402
CS + G ++ + K M+T+ +R G ++ A +P++ D
Sbjct: 497 CSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDAC 556
Query: 403 SWNSIICGLAYHG-------YAEKALEL 423
W +++ H AEK EL
Sbjct: 557 VWGALLSSCRVHNNVSLGEVAAEKLFEL 584
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 205/643 (31%), Positives = 331/643 (51%), Gaps = 77/643 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVI-- 59
+ +++ LF + +R+ V+WN + Y ++ A+ LF +M + F+ + ++
Sbjct: 133 LDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNA 192
Query: 60 -AGLMQSDNVQGAKEVFDGMEVR-DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
AGL + D + + M + D + N+++ Y G I+ A+ VF + DVVSW
Sbjct: 193 CAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSW 252
Query: 118 NLVIGALV--NCQRMDL-------------------------AESYFKEMGAR------- 143
N +I V +C + L A FKE+G +
Sbjct: 253 NAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIK 312
Query: 144 -DVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
D S GLV + + +AR+ +D MP KD+ AWN +I+GY G A L
Sbjct: 313 MDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSL 372
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
F KM D+ + ++ ++ S AI KQ I ++ I++G+
Sbjct: 373 FSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQ-----------IHTISIKSGI----- 416
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
YS+ +++ Y + + A K+FE T D+ + MI + GEE
Sbjct: 417 -------YSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEE 469
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
LK ++QM+++ PD +S+L C++L + G+Q+H AIK SN+++
Sbjct: 470 ALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVN 529
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MYA+CG+I+ A FS +P I+SW+++I G A HG+ ++AL LF +M P+ IT
Sbjct: 530 MYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHIT 589
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
V VL AC++AGLV++G+ YF+ M+ + ++P HY C++DLLGR G ++EA+ L+N I
Sbjct: 590 LVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSI 649
Query: 499 --RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
ADG VWGALLGA RIH NI++G+ A + + +LEP SG +++L +Y S G
Sbjct: 650 PFEADGF-----VWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGM 704
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
E+ ++ MK++ VKKEPG SWI+I D + F+ GD SH +
Sbjct: 705 WENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSR 747
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 146/596 (24%), Positives = 277/596 (46%), Gaps = 44/596 (7%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI- 59
R A+ L D+ + D V+W+ ++ GY +NGF++ A+ +FN+M + + FT+ +V+
Sbjct: 31 RFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLK 90
Query: 60 AGLMQSDNVQGAK----EVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
A M+ D G K V G E D N+++ Y GL+D++ R+F G+ ++VV
Sbjct: 91 ACSMKRDLNMGRKVHGMAVVTGFE-SDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVV 149
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGL--VREGRIVEARKLFD 169
SWN + V + A FKEM + S +I++N ++EG + RK+
Sbjct: 150 SWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDL--GRKIHG 207
Query: 170 KMPAK----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
M D + N ++ Y G + A +FQ + D+ SW +I G V D
Sbjct: 208 LMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDL 267
Query: 226 AISYFKQMPETCEK----TWNSIISVLIRNG---LVKEAHSYLEKY-PYSNIASWTNVIV 277
A+ +M + + T +S + G L ++ HS L K +S++ + ++
Sbjct: 268 ALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVD 327
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + + A + ++ M +D+ WN +I G + + + F +M + T
Sbjct: 328 MYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTT 387
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
++VL + L + + +QIH +IK V N+++ Y +C +I A F
Sbjct: 388 LSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERT 447
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR- 456
D++++ S+I + +G E+AL+L+ +M+ D KPD +L+AC+ +QG+
Sbjct: 448 WEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQ 507
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
+ +K + +++ +V++ + G I++A +EI GI W A++G
Sbjct: 508 LHVHAIKFGFMCDIFASN--SLVNMYAKCGSIEDADRAFSEIPNRGI----VSWSAMIGG 561
Query: 517 CRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMK 568
H + K + + + + P N ++ L + +C G + K+ F +M+
Sbjct: 562 YAQHGHGKEALRLFNQMLRDGVPPN---HITLVSVLCACNHAGLVNEGKQYFEKME 614
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 142/292 (48%), Gaps = 8/292 (2%)
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
++D N ++ Y G A L + + D+ SW L++G V + ++ A+ F +
Sbjct: 13 SRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNE 72
Query: 233 M----PETCEKTWNSIISV--LIRN-GLVKEAHSYLEKYPYSNIASWTN-VIVGYFEMGE 284
M + E T+ S++ + R+ + ++ H + + N ++V Y + G
Sbjct: 73 MCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGL 132
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+ + ++F + R+V WN + +++L E + F +M SG P+ + + +L
Sbjct: 133 LDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNA 192
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
C+ L DLGR+IH +K+ + +NA++ MY++ G I+ A+ F + D++SW
Sbjct: 193 CAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSW 252
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
N+II G H + AL L + M+ + +P+ T L AC+ G + GR
Sbjct: 253 NAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGR 304
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 11/196 (5%)
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
++HA IK ++ ++ N ++T+Y++C A D++SW+S++ G +G
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
+ E+AL +F M L K ++ TF VL ACS ++ GR F
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG---ER 532
T VV + + GL+D++ L I +E + W AL +C + + + GE G E
Sbjct: 122 TLVV-MYAKCGLLDDSRRLFGGI----VERNVVSWNALF-SCYVQSEL-CGEAVGLFKEM 174
Query: 533 VME-LEPNNSGVYLIL 547
V + PN + +IL
Sbjct: 175 VRSGIMPNEFSISIIL 190
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 486 GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVY 544
G ++EA+ + NE+ G++ + + ++L AC + ++ +G ++ G V+ ++ V
Sbjct: 61 GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGV 572
L MY CG +D++R+F + E V
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNV 148
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 216/633 (34%), Positives = 324/633 (51%), Gaps = 57/633 (9%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYNTVIAGL 62
A+ LFD+MP R+ VTW +I GY +NG ++A + +M P R F + + I
Sbjct: 54 ARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPNR--FAFGSAIRAC 111
Query: 63 MQS-------DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+S V G + G+ V N +I+ Y G ID A VF M KD V
Sbjct: 112 QESMLWRRKGRQVHGYA-IRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSV 170
Query: 116 SWNLVIGAL-------------VNCQRMDLAESYFKEMGA-RDVASWTIMVNGLVREGRI 161
SWN +I L + ++ L S F + A AS ++ G G
Sbjct: 171 SWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHG-- 228
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS- 220
E KL M DV N ++A Y + + + +F M +RD SW +I L +S
Sbjct: 229 -EGIKLGLDM---DVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSG 284
Query: 221 RRIDAAISYFKQMPETCEKTWN----------SIISVLIRNGLVKEAHSYLEKYPYSNIA 270
+ AI F +M W+ + +S L + L + H+ + KY +
Sbjct: 285 ASVSEAIEVFLEMMRA---GWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDN 341
Query: 271 SWTNVIVG-YFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ N ++ Y + GE+ + ++F M+ R D WN MI G N+L + + M +
Sbjct: 342 AIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQ 401
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
G D TF +VL+ C+ + TL+ G ++HA AI+ + +A++ MY++CG I
Sbjct: 402 RGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDY 461
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F+ +P+ ++ SWNS+I G A HG+ + AL LF RM+L+ PD ITFVGVLSACS+
Sbjct: 462 ASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSH 521
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
GLVD+G YF M Y L PR HY+C+VDLLGR G +D+ N +N++ I+ +
Sbjct: 522 IGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKM---PIKPNIL 578
Query: 509 VWGALLGACRIHNNIK--VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
+W +LGAC N K +G A E + ++P N+ Y++L+ MY S G+ ED R
Sbjct: 579 IWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRA 638
Query: 567 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
M+E VKKE GCSW+ + DG HVF++GD+SHP+
Sbjct: 639 MREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPE 671
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 211/492 (42%), Gaps = 69/492 (14%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
++N VR G V ARKLFD+MP ++ W +I+GY NG A + ++M
Sbjct: 41 LINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEM-------- 92
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKT--WNSIISVLIRNGLVKEAHSYLEKYPYSN 268
+ G + +R F C+++ W R G ++ H Y + ++
Sbjct: 93 --IFEGFLPNRFA------FGSAIRACQESMLWR-------RKG--RQVHGYAIRTGLND 135
Query: 269 --IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
+A +I Y + G++ A VF LM +D WN MI GL +N E+ +K + M
Sbjct: 136 AKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSM 195
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
+++G P N S L+ C+ L + LG+Q H + IK+ + +VSN ++ +YA +
Sbjct: 196 RKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRL 255
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYA-EKALELFERMRLTDFKPDDITFVGVLSA 445
FS + D +SWN++I LA G + +A+E+F M + P+ +TF+ +L+
Sbjct: 256 AECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLAT 315
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG------------------- 486
S + + + KY ++ +A ++ G+ G
Sbjct: 316 VSSLS-TSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEV 374
Query: 487 -------------LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGER 532
L+ +AM+L+ + G + + +L AC ++ G E+
Sbjct: 375 SWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACA 434
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLS 592
+ ++ + L +MY CGR + A R F M + SW + G
Sbjct: 435 IRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLY-----SWNSMISGYARHGH 489
Query: 593 GDSSHPKFHRLR 604
GD++ F R++
Sbjct: 490 GDNALRLFTRMK 501
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 200/434 (46%), Gaps = 34/434 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I A+++F M +D+V+WN MI G +N ++A+ +N M + + N + + S
Sbjct: 154 IDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSS 213
Query: 66 DN-----VQGAKEVFDGMEV---RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ G + +G+++ DV N++++ Y + E +VF M +D VSW
Sbjct: 214 CASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSW 273
Query: 118 NLVIGALVN--CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEAR------KLFD 169
N VIGAL + + E + + M A + +N L + ++ L
Sbjct: 274 NTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALIL 333
Query: 170 KMPAKDVQAW-NLMIAGYLDNGCVGVAEDLFQKMHD-RDLTSWKQLINGLVNSRRIDAAI 227
K KD A N ++A Y +G + E++F +M + RD SW +I+G +++ + A+
Sbjct: 334 KYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAM 393
Query: 228 SYFKQMPETCEK----TWNSIISVLIRNGLVK---EAHS-YLEKYPYSNIASWTNVIVGY 279
M + ++ T+ +++S ++ E H+ + S++ + ++ Y
Sbjct: 394 DLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMY 453
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G + A + F LM R++ WN MI G + G+ L+ F +MK SG PD+ TF
Sbjct: 454 SKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFV 513
Query: 340 SVLTICSDLPTLDLGRQIHAQAIK----IARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
VL+ CS + +D G + + + R + + M+ + R G + +
Sbjct: 514 GVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYS---CMVDLLGRAGELDKIENFINK 570
Query: 396 VPIH-DIISWNSII 408
+PI +I+ W +++
Sbjct: 571 MPIKPNILIWRTVL 584
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 144/332 (43%), Gaps = 59/332 (17%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGF-LDNAMCLFNQM------PERDMF--- 53
+R+ E Q +F M +RD V+WN +I +G + A+ +F +M P R F
Sbjct: 253 SRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINL 312
Query: 54 ------------------------------TYNTVIAGLMQSDNVQGAKEVFDGM-EVRD 82
N ++A +S ++ +E+F M E RD
Sbjct: 313 LATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRD 372
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQR----MDLAE 134
V+WNSMISGY+ N L+ +A+ + M + D ++ V+ A M++
Sbjct: 373 EVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHA 432
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ DV + +V+ + GRI A + F+ MP +++ +WN MI+GY +G
Sbjct: 433 CAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDN 492
Query: 195 AEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCE-----KTWNSII 245
A LF +M D ++ +++ + +D YFK M E + ++ ++
Sbjct: 493 ALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMV 552
Query: 246 SVLIRNGLVKEAHSYLEKYPYS-NIASWTNVI 276
+L R G + + +++ K P NI W V+
Sbjct: 553 DLLGRAGELDKIENFINKMPIKPNILIWRTVL 584
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 99/222 (44%), Gaps = 49/222 (22%)
Query: 2 RNARIQEAQNLFDKMPQR-DTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
++ ++ + +F +M +R D V+WN MI GY N L AM L M +R D FT+
Sbjct: 353 KSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFA 412
Query: 57 TVIAGL--------------------MQSDNVQG---------------AKEVFDGMEVR 81
TV++ ++SD V G A F+ M VR
Sbjct: 413 TVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR 472
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQRMDLAE---SYF 137
++ +WNSMISGY +G D ALR+F M L + ++ +G L C + L + YF
Sbjct: 473 NLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYF 532
Query: 138 KEMG-----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
K M V ++ MV+ L R G + + +KMP K
Sbjct: 533 KSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIK 574
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%)
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H +K + + N +I +Y R G+ SA F +P + ++W +I G +G
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSAC 446
E A + + M F P+ F + AC
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRAC 111
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 209/724 (28%), Positives = 332/724 (45%), Gaps = 132/724 (18%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----------- 50
+N + A+ +F+++ +D+V+W MI G +NG D A+ LF QM +
Sbjct: 159 KNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSS 218
Query: 51 ----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
+ F N ++ + N+ A+++F M RD
Sbjct: 219 VLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRD 278
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPL------------------------------- 111
+++NS+ISG G D AL++F M L
Sbjct: 279 RISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHS 338
Query: 112 ---KDVVSWNLVI-GAL----VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVE 163
K +S +L+I G+L V C ++ A YF +V W +M+ + G + E
Sbjct: 339 YVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSE 398
Query: 164 ARKLFDKMPAK---------------------------------------DVQAWNLMIA 184
+ +F +M + +V +++I
Sbjct: 399 SYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLID 458
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT---- 240
Y +G + A + Q++ + D+ SW +I G A+ F++M ++
Sbjct: 459 MYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIG 518
Query: 241 WNSIISVL-----IRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFEL 294
++S IS + G A SY+ Y S S N +V Y G A FE
Sbjct: 519 FSSAISACAGIQALNQGQQIHAQSYISGY--SEDLSIGNALVSLYARCGRAQDAYLAFEK 576
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+ +D WN +I G ++ EE L+ F QM ++G + TF S ++ ++ + G
Sbjct: 577 IDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQG 636
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
+QIHA IK + T SN +IT+Y++CG+I+ A EF +P +++SWN++I G + H
Sbjct: 637 KQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQH 696
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
GY +A+ LFE M+ P+ +TFVGVLSACS+ GLV++G YF M ++ L P+ H
Sbjct: 697 GYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEH 756
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM 534
Y CVVDLLGR L+ A + E+ IE +W LL AC +H NI++GE A ++
Sbjct: 757 YVCVVDLLGRAALLCCAREFIEEMP---IEPDAMIWRTLLSACTVHKNIEIGEFAARHLL 813
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
ELEP +S Y++L+ MY G+ + R MK+ GVKKEPG SWI++ + H F GD
Sbjct: 814 ELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGD 873
Query: 595 SSHP 598
HP
Sbjct: 874 RLHP 877
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 165/636 (25%), Positives = 272/636 (42%), Gaps = 72/636 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+ + + A LFD +P + WN +I G + LF+ M ++ + A
Sbjct: 56 LAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFA 115
Query: 61 GLMQSDNVQGAKEVFDGMEV-----------RDVVTWNSMISGYVCNGLIDEALRVFHGM 109
++++ G K F E + N +I Y NG +D A VF +
Sbjct: 116 SVLRA--CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERL 173
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
LKD VSW +I L R D A F +M V + + ++ +E KL +
Sbjct: 174 FLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGE 233
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGV---------AEDLFQKMHDRDLTSWKQLINGLVNS 220
++ V+ W L ++ N V + AE +F KMH RD S+ LI+GL
Sbjct: 234 QLHGFIVK-WGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQR 292
Query: 221 RRIDAAISYFKQMPETCEK----TWNSIISVLIRNGL---VKEAHSYLEKYPY-SNIASW 272
D A+ F++M C K T S++S G K+ HSY+ K S++
Sbjct: 293 GFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIE 352
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+++ Y + ++ +A + F T +V +WNVM+ G+ E F+QM+ G
Sbjct: 353 GSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLM 412
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P+ T+ S+L C+ L LDLG QIH Q IK V + +I MYA+ G + +A
Sbjct: 413 PNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGI 472
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
+ D++SW ++I G H +AL+LF+ M + D+I F +SAC+ +
Sbjct: 473 LQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQAL 532
Query: 453 DQGR-----------------------YYFDC--MKNKYFLQPR-----SAHYTCVVDLL 482
+QG+ Y C ++ Y + + + ++
Sbjct: 533 NQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGF 592
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE------IAGERVMEL 536
+ G +EA+ + +++ G+E + +G+ + A NIK G+ I E
Sbjct: 593 AQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSET 652
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
E +N +L +Y CG EDAKR F +M E V
Sbjct: 653 EASN-----VLITLYSKCGSIEDAKREFFEMPEKNV 683
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 229/483 (47%), Gaps = 51/483 (10%)
Query: 138 KEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKM-----PAKDVQAWNLMIAGYLDNGC 191
+E G R +V ++ + G G +++A+KL ++ +DV L I YL +G
Sbjct: 2 EERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRL-IDIYLAHGE 60
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSII 245
V A LF + +++ W ++I+GL+ + + F M P+ E T+ S++
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPD--ESTFASVL 118
Query: 246 SVLIRNG----LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDV 300
+ ++ H+ + + + + N ++ Y + G V A VFE + +D
Sbjct: 119 RACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDS 178
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W MI GL +N +E + F QM +S P F+SVL+ C+ + LG Q+H
Sbjct: 179 VSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGF 238
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
+K + T V NA++T+Y+R GN+ +A FS + D IS+NS+I GLA G++++A
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRA 298
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-----------------------Y 457
L+LFE+M+L KPD +T +LSAC+ G +G+
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDL 358
Query: 458 YFDCM----KNKYFLQPRSAH---YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
Y C ++YFL + + + ++ G+ G + E+ + +++ +G+ + +
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
++L C + +GE +V++ N V +L +MY G + A+ I +++E
Sbjct: 419 PSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLRE 478
Query: 570 NGV 572
V
Sbjct: 479 EDV 481
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 117/275 (42%), Gaps = 34/275 (12%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+E G + T+ + C + +L +++HA+ K + + + +I +Y G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+ +A+ F +P ++ WN +I GL A + L LF M + PD+ TF VL A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 446 CS------------YAGLVDQG-----------------RYYFDCMK---NKYFLQPRSA 473
CS +A ++ G + D K + FL+ S
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKD-SV 179
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE-IAGER 532
+ ++ L + G DEA+ L ++ + +P V+ ++L AC K+GE + G
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI 239
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
V + + V L +Y G A++IF++M
Sbjct: 240 VKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKM 274
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 186/563 (33%), Positives = 300/563 (53%), Gaps = 48/563 (8%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM---PLK-DVVSWNLVIGALVN 126
AK +F ++ +NS+I + EAL ++H M LK D +++ VI A
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKA--- 204
Query: 127 CQRMD------LAESYFKEMGARDVASWTIMVNGLVREGR-IVEARKLFDKMPAKDVQAW 179
C L ++ + G + + L G+ + A++LF+ A+DV +W
Sbjct: 205 CNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSW 264
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N MI GY+ + +G A +F +M RD+ SW +ING +ID
Sbjct: 265 NAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKID--------------- 309
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
EA ++ P N+ SW +++ G+ + G V A +F M RD
Sbjct: 310 ----------------EAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRD 353
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
V WN M+ + E L F QM+ G P AT S+L+ C+ L LD G +H
Sbjct: 354 VVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHT 413
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
+ V A++ MYA+CG I A F+++ D+++WN+II G+A HG ++
Sbjct: 414 YINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKE 473
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A +LF+ M+ +P+DITFV +LSACS+AG+VD+G+ DCM + Y ++P+ HY CV+
Sbjct: 474 AQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVI 533
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
DLL R G ++EAM L+ + +E +P+ GALLG CRIH N ++GE+ G+R++ L+P
Sbjct: 534 DLLARAGFLEEAMELIGTMP---MEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPC 590
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
+SG Y++L+ +Y + + +DA+++ MK NG+ K PG S I++ H F++GD SHP+
Sbjct: 591 HSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPE 650
Query: 600 FHRLRYLLNLLHTEIEREILFDA 622
+++ LN +HT ++ I + A
Sbjct: 651 SNKIYEKLNEIHTRLKSAIGYSA 673
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 124/468 (26%), Positives = 206/468 (44%), Gaps = 72/468 (15%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
E D + +++I ++ AK++F+ RDVV+WN+MI GYV + + A VF
Sbjct: 227 ECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDR 286
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
M +DV+SWN +I ++D A+ F EM R++ SW M+ G V+ G + +A LF
Sbjct: 287 MVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLF 346
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+MP +DV +WN M+A Y G A LF +M R +
Sbjct: 347 SEMPCRDVVSWNSMLACYAQCGKPNEALALFDQM------------------RAVGV--- 385
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEM 282
+ E T S++S G + + +L Y N N IVG Y +
Sbjct: 386 ------KPTEATVVSLLSACAHLGALDKG-LHLHTYINDNRIE-VNSIVGTALVDMYAKC 437
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G++ A +VF M ++DV WN +I G+ + +E + F +MKE+G P++ TF ++L
Sbjct: 438 GKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAIL 497
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
+ CS +D G+++ + M + Y ++
Sbjct: 498 SACSHAGMVDEGQKL---------------LDCMSSSYGIEPKVE--------------- 527
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
+ +I LA G+ E+A+EL M + +P+ +L C G + G +
Sbjct: 528 HYGCVIDLLARAGFLEEAMELIGTMPM---EPNPSALGALLGGCRIHGNFELGEMVGKRL 584
Query: 463 KNKYFLQP-RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
N LQP S Y + ++ D+A + N ++ +GI P V
Sbjct: 585 IN---LQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGV 629
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 159/333 (47%), Gaps = 58/333 (17%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ LF+ RD V+WN MI GY K+ + +A +F++M RD+ ++NT+I G +
Sbjct: 249 AKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKI 308
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQ 128
AK +FD M R++V+WNSM++G+V G +++A +F MP +DVVSWN ++ C
Sbjct: 309 DEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCG 368
Query: 129 RMDLAESYFKEMGARDVASW---------------------------------------T 149
+ + A + F +M A V T
Sbjct: 369 KPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGT 428
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD----- 204
+V+ + G+I A ++F+ M +KDV AWN +IAG +G V A+ LF++M +
Sbjct: 429 ALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEP 488
Query: 205 RDLTSWKQLI----NGLVN--SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
D+T L G+V+ + +D S + P+ + + +I +L R G ++EA
Sbjct: 489 NDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKV--EHYGCVIDLLARAGFLEEAM 546
Query: 259 SYLEKYPYSNIASWTNVIV------GYFEMGEV 285
+ P S ++ G FE+GE+
Sbjct: 547 ELIGTMPMEPNPSALGALLGGCRIHGNFELGEM 579
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 129/286 (45%), Gaps = 43/286 (15%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D+ + +I Y L A LFN RD+ ++N +I G ++ + A+ VFD M
Sbjct: 229 DSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMV 288
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKE 139
RDV++WN+MI+GY G IDEA R+F MP +++VSWN ++ V C ++ A F E
Sbjct: 289 CRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSE 348
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA---------GYLDNG 190
M RDV SW M+ + G+ EA LFD+M A V+ + G LD G
Sbjct: 349 MPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKG 408
Query: 191 C------------------------------VGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ +A +F M +D+ +W +I G+
Sbjct: 409 LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIH 468
Query: 221 RRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLVKEAHSYLE 262
+ A FK+M E + T+ +I+S G+V E L+
Sbjct: 469 GNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLD 514
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 277/488 (56%), Gaps = 8/488 (1%)
Query: 128 QRMDL--AESYFKEMGARDVASWTIMVNGLVRE-GRIVEARKLFDKMPAKDVQAWNLMIA 184
+R DL AE F + A++ ++ G R GR+ +AR LFD++P D ++N +++
Sbjct: 78 RRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLS 137
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI 244
+ +G A LF M RD+ SW +++GL S ++ A + F MP +WN++
Sbjct: 138 CHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAM 197
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+S + + A + P A WT ++ GY ++G V AI+ FE M R++ W
Sbjct: 198 VSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSW 257
Query: 304 NVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
N ++ G +N ++ L+ F M +E+ P+ +T +SVL CS+L L G+QIH +
Sbjct: 258 NAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCM 317
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
K+ ++ TV ++++MY +CG++ SA F + D+++WN++I G A HG ++A+
Sbjct: 318 KLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAIN 377
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
LFERM+ +P+ ITFV VL+AC + GL D G F+ M+ Y ++PR HY+C+VDLL
Sbjct: 378 LFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLL 437
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
R G ++ A++L IR+ E P+ +G LL ACR++ N++ E+A +++E +P ++G
Sbjct: 438 CRAGKLERAVDL---IRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAG 494
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHR 602
Y+ L +Y + +D R+ MK+N V K PG SWI+I H F S D HP+ +
Sbjct: 495 AYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYL 554
Query: 603 LRYLLNLL 610
+ L L
Sbjct: 555 IHEKLGQL 562
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 200/401 (49%), Gaps = 27/401 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN-GFLDNAMCLFNQMPERDMFTYNTVI 59
+R + A+ F P++ T T+N ++ GY + G L +A LF+++P D +YNT++
Sbjct: 77 VRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLL 136
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+ S + GA+ +F M VRDVV+WN+M+SG +G ++EA VF MP+++ VSWN
Sbjct: 137 SCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNA 196
Query: 120 VIGALVNCQRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
++ + M AE +F+ + D WT MV+G + G +V+A + F+ MP +++ +
Sbjct: 197 MVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVS 256
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
WN ++AGY+ N A LF+ M V + S + C
Sbjct: 257 WNAVVAGYVKNSHADDALRLFRTM---------------VREANVQPNASTLSSVLLGC- 300
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
S +S L G K+ H + K P S N+ T+++ Y + G++ SA K+F M T
Sbjct: 301 ----SNLSAL---GFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHT 353
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG-RQ 356
RDV WN MI G ++ G+E + F +MK+ G P+ TF +VLT C D G R
Sbjct: 354 RDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRC 413
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+ M+ + R G ++ A+ S+P
Sbjct: 414 FEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMP 454
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 190/671 (28%), Positives = 328/671 (48%), Gaps = 65/671 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
+ + +F +M RD VTW+ MI Y N A F +M E + T+ +++
Sbjct: 129 VASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKA 188
Query: 62 LMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
++ A+E+ GME DV ++I+ Y G I A +F M ++VVS
Sbjct: 189 CNNYSMLEKAREIHTVVKASGMET-DVAVATALITMYSKCGEISLACEIFQKMKERNVVS 247
Query: 117 WNLVIGALVNCQRMDLAESYFKEM-----------------------------------G 141
W +I A ++++ A +++M
Sbjct: 248 WTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHIS 307
Query: 142 ARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG-----CV 192
R + + ++ N L+ + I +AR+ FD+M +DV +W+ MIAGY +G +
Sbjct: 308 ERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESL 367
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT--------WNSI 244
L ++M + K ++ + + A+ +Q+ K +I
Sbjct: 368 DEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAI 427
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
++ + G + EA K N+ +W +++ Y + G++ SA KVF M+TR+V WN
Sbjct: 428 FNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWN 487
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
+MI G ++ + + MK G PD T S+L C L L+ G+ +HA+A+K+
Sbjct: 488 LMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKL 547
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
T V+ ++I MY++CG + A F + D ++WN+++ G HG +A++LF
Sbjct: 548 GLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLF 607
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
+RM P++ITF V+SAC AGLV +GR F M+ + ++P HY C+VDLLGR
Sbjct: 608 KRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGR 667
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G + EA + + E +VW ALLGAC+ H+N+++ E A ++ LEP+N+ VY
Sbjct: 668 AGRLQEAEEFIQRMPC---EPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVY 724
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
+ L+ +Y GR +D+ ++ M + G+KK+ G S I+I+ H F++ D +HP+ +
Sbjct: 725 VTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIH 784
Query: 605 YLLNLLHTEIE 615
L +L E++
Sbjct: 785 AELEMLTKEMK 795
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 145/330 (43%), Gaps = 36/330 (10%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G+V S +VF MT RDV W+ MI N+ + F +MK++ P+ TF
Sbjct: 123 YSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITF 182
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
S+L C++ L+ R+IH V+ A+ITMY++CG I A F +
Sbjct: 183 LSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKE 242
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
+++SW +II A H +A EL+E+M P+ +TFV +L++C+ +++GR
Sbjct: 243 RNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRI 302
Query: 459 FDCMKNKYF---------LQPRSAHYTCVVDLLGRFGL---------------------- 487
+ + L C+ D F
Sbjct: 303 HSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQ 362
Query: 488 ----IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSG 542
+DE LL +R +G+ + + ++L AC +H ++ G +I E ++
Sbjct: 363 DKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRS 422
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ + MY CG +A+++F++M+ V
Sbjct: 423 LQTAIFNMYAKCGSIYEAEQVFSKMENKNV 452
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 132/296 (44%), Gaps = 49/296 (16%)
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
+E ++ +K+ G ++ T+ ++ C+ L + G+ +H Q ++ + N++
Sbjct: 60 KEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSL 119
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
I Y++ G++ S F + + D+++W+S+I A + + KA + FERM+ + +P+
Sbjct: 120 INFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNR 179
Query: 437 ITFVGVLSACSYAGLVDQGR-----------------------YYFDC----MKNKYFLQ 469
ITF+ +L AC+ ++++ R Y C + + F +
Sbjct: 180 ITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQK 239
Query: 470 PRSAH---YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC--------- 517
+ + +T ++ + ++EA L ++ GI + + +LL +C
Sbjct: 240 MKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRG 299
Query: 518 -RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
RIH++I ER +E + V L MY C +DA+ F +M + V
Sbjct: 300 RRIHSHI------SERGLE---TDVVVANALITMYCKCNCIQDARETFDRMSKRDV 346
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 277/488 (56%), Gaps = 8/488 (1%)
Query: 128 QRMDL--AESYFKEMGARDVASWTIMVNGLVRE-GRIVEARKLFDKMPAKDVQAWNLMIA 184
+R DL AE F + A++ ++ G R GR+ +AR LFD++P D ++N +++
Sbjct: 29 RRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLS 88
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI 244
+ +G A LF M RD+ SW +++GL S ++ A + F MP +WN++
Sbjct: 89 CHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAM 148
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+S + + A + P A WT ++ GY ++G V AI+ FE M R++ W
Sbjct: 149 VSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSW 208
Query: 304 NVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
N ++ G +N ++ L+ F M +E+ P+ +T +SVL CS+L L G+QIH +
Sbjct: 209 NAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCM 268
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
K+ ++ TV ++++MY +CG++ SA F + D+++WN++I G A HG ++A+
Sbjct: 269 KLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAIN 328
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
LFERM+ +P+ ITFV VL+AC + GL D G F+ M+ Y ++PR HY+C+VDLL
Sbjct: 329 LFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLL 388
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
R G ++ A++L IR+ E P+ +G LL ACR++ N++ E+A +++E +P ++G
Sbjct: 389 CRAGKLERAVDL---IRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAG 445
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHR 602
Y+ L +Y + +D R+ MK+N V K PG SWI+I H F S D HP+ +
Sbjct: 446 AYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYL 505
Query: 603 LRYLLNLL 610
+ L L
Sbjct: 506 IHEKLGQL 513
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 200/401 (49%), Gaps = 27/401 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN-GFLDNAMCLFNQMPERDMFTYNTVI 59
+R + A+ F P++ T T+N ++ GY + G L +A LF+++P D +YNT++
Sbjct: 28 VRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLL 87
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+ S + GA+ +F M VRDVV+WN+M+SG +G ++EA VF MP+++ VSWN
Sbjct: 88 SCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNA 147
Query: 120 VIGALVNCQRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
++ + M AE +F+ + D WT MV+G + G +V+A + F+ MP +++ +
Sbjct: 148 MVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVS 207
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
WN ++AGY+ N A LF+ M V + S + C
Sbjct: 208 WNAVVAGYVKNSHADDALRLFRTM---------------VREANVQPNASTLSSVLLGC- 251
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
S +S L G K+ H + K P S N+ T+++ Y + G++ SA K+F M T
Sbjct: 252 ----SNLSAL---GFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHT 304
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG-RQ 356
RDV WN MI G ++ G+E + F +MK+ G P+ TF +VLT C D G R
Sbjct: 305 RDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRC 364
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+ M+ + R G ++ A+ S+P
Sbjct: 365 FEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMP 405
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 166/481 (34%), Positives = 273/481 (56%), Gaps = 6/481 (1%)
Query: 133 AESYFKEMGARDVASWTIMVNGLVR-EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
AE F + A++ ++ G R GR+ +AR LFD++P DV ++N ++ + +G
Sbjct: 36 AEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIPTPDVVSYNTLLLCHFASGD 95
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN 251
A LF M RD+ SW +++GL S ++ A F MP +WN+++S +
Sbjct: 96 ADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGFACS 155
Query: 252 GLVKEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
G + A + P A WT ++ GY ++G V AIK FE M R++ WN ++ G
Sbjct: 156 GDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGY 215
Query: 311 GENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
+N ++ L+ F M +E+ P+ +T +SVL CS+L L G+QIH +K+ ++
Sbjct: 216 VKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRN 275
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
TV ++++MY +CG++ SA + F + D+++WN++I G A HG ++A+ LFERM+
Sbjct: 276 LTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKD 335
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+P+ ITFV VL+AC + GL D G F+ M+ Y ++PR HY+C+VDLL R G ++
Sbjct: 336 EGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLE 395
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
A++ IR+ E P+ +G LL ACR++ N++ E+A +++E +P ++G Y+ L
Sbjct: 396 RAVDF---IRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLAN 452
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNL 609
+Y + +D R+ MK+N V K PG SWI+I H F S D HP+ + + L
Sbjct: 453 IYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQ 512
Query: 610 L 610
L
Sbjct: 513 L 513
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 200/405 (49%), Gaps = 35/405 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN-GFLDNAMCLFNQMPERDMFTYNTVI 59
+R+ + A+ F P++ T T+N ++ GY + G L +A LF+++P D+ +YNT++
Sbjct: 28 VRHGDLAGAEEAFVSTPRKTTATYNCLLAGYARAPGRLADARHLFDRIPTPDVVSYNTLL 87
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
S + GA+ +F M VRDV +WN+M+SG +G ++EA VF MP+++ VSWN
Sbjct: 88 LCHFASGDADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNA 147
Query: 120 VIGALVNCQRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
++ M AE +F+ + D WT MV+G + G +V+A K F+ MP +++ +
Sbjct: 148 MVSGFACSGDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVS 207
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
WN ++AGY+ N A LF+ M V + S + C
Sbjct: 208 WNAVVAGYVKNSHADDALRLFRTM---------------VREANVQPNASTLSSVLLGC- 251
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
S +S L G K+ H + K S N+ T+++ Y + G++ SA +F M T
Sbjct: 252 ----SNLSAL---GFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHT 304
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
RDV WN MI G ++ G+E + F +MK+ G P+ TF VLT C D G Q
Sbjct: 305 RDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQC 364
Query: 358 -----HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
I+ + ++ M+ + R G ++ A+ S+P
Sbjct: 365 FEGMQELYGIEPRVDHYS----CMVDLLCRAGKLERAVDFIRSMP 405
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 193/558 (34%), Positives = 294/558 (52%), Gaps = 39/558 (6%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-- 106
E + F I + + A+++FD + + TWN+M GY+ NG + + +F
Sbjct: 41 EHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGE 100
Query: 107 ----HGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIV 162
GMP + ++ ++I + C +++ VREG V
Sbjct: 101 LNRIAGMP--NCFTFPMIIKS---CGKLEG-----------------------VREGEEV 132
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ A +L I Y GCV A +F +MH+R++ W +ING +
Sbjct: 133 HCCATKHGFKSNSFVATSL-IDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGD 191
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
+ + F PE W+ +IS I + + A +K P + SW ++ GY
Sbjct: 192 VVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVN 251
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS-PDNATFTSV 341
GEV KVF+ M R+V WN +I G +N L E L+ F +M G P++ T +V
Sbjct: 252 GEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAV 311
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L+ CS L LD+G+ +H A I V N +I MYA+CG I++A++ F+ + DI
Sbjct: 312 LSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDI 371
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
ISWN+II GLA HG+A AL +F+RM+ +PD +TFVG+LSAC++ GLV G YF
Sbjct: 372 ISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKS 431
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
M + Y + P+ HY C+VDLLGR GL+D+A+N IR IE +W ALLGACR++
Sbjct: 432 MVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNF---IRKMPIEPDAVIWAALLGACRLYK 488
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
N+++ E+A +R++ELEPNN +++++ +Y GR ED R+ M++ G +K PGCS I
Sbjct: 489 NVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVI 548
Query: 582 QINDGGHVFLSGDSSHPK 599
+ ND F S D H +
Sbjct: 549 ECNDSVVEFYSLDERHSE 566
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 217/463 (46%), Gaps = 39/463 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQ------MPERDMFTY 55
R RI A+ LFDK+PQ +T TWN M RGY +NG + + LF + MP + FT+
Sbjct: 56 RFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMP--NCFTF 113
Query: 56 NTVIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
+I + + V+ +EV G + V S+I Y G +++A +VF M
Sbjct: 114 PMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVA-TSLIDMYSKKGCVEDAYKVFGEMH 172
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
++VV W +I + C + F RDV W+++++G + + AR+LFDK
Sbjct: 173 ERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDK 232
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
MP +D +WN M+ GY NG V + E +F +M +R++ SW LI G V + + F
Sbjct: 233 MPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESF 292
Query: 231 KQM-------PETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-Y 279
K+M P + T +++S R G + K H Y E Y NV++ Y
Sbjct: 293 KRMLVEGHVIPN--DFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMY 350
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G + +A+ VF + +D+ WN +I GL + + L F +MK G PD TF
Sbjct: 351 AKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFV 410
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLEFS 394
+L+ C+ + + G + + ++ V M+ + R G + AL
Sbjct: 411 GILSACTHMGLVKDGFLYFKSMV----DHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIR 466
Query: 395 SVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+PI D + W +++ + E A + RL + +P++
Sbjct: 467 KMPIEPDAVIWAALLGACRLYKNVEIAELALQ--RLIELEPNN 507
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 164/392 (41%), Gaps = 62/392 (15%)
Query: 27 MIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
+I Y K G +++A +F +M ER++ + +I G + +V + +FD RDVV W
Sbjct: 151 LIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVMW 210
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA 146
+ +ISGY+ + + A +F MP +D +SWN ++ +++ E F EM R+V
Sbjct: 211 SVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVF 270
Query: 147 SWTIMVNGLVREGRIVEARKLFDKM-----------------------PAKDVQAW---- 179
SW ++ G V+ G E + F +M A D+ W
Sbjct: 271 SWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVY 330
Query: 180 -------------NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
N++I Y G + A +F + +D+ SW +INGL A
Sbjct: 331 AESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDA 390
Query: 227 ISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEKY--PYS---NIASWTNVIV 277
+ F +M E+ T+ I+S GLVK+ Y + YS I + ++
Sbjct: 391 LGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVD 450
Query: 278 GYFEMGEVGSAIKVFELMTTR-DVTVWNVMIFG--LGEN-DLGEEGLKFFVQMKESGPSP 333
G + A+ M D +W ++ L +N ++ E L+ ++++ + P
Sbjct: 451 LLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIELEPNNP-- 508
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
A F V I DLGR +KIA
Sbjct: 509 --ANFVMVSNIYK-----DLGRSEDVARLKIA 533
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 97/231 (41%), Gaps = 13/231 (5%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F ++L C + L QI AQ + V+ IT +R I A F +P
Sbjct: 15 FITLLRSCKNYERL---HQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIP 71
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ +WN++ G +G+ + LF + P+ TF ++ +C V +G
Sbjct: 72 QPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGE- 130
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
C K+ + S T ++D+ + G +++A + E+ E + VW A++
Sbjct: 131 EVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMH----ERNVVVWTAIINGY 186
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGV-YLILTEMYLSCGRREDAKRIFAQM 567
+ ++ ++G R+ +L P V + +L Y+ A+ +F +M
Sbjct: 187 ILCGDV----VSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKM 233
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 204/646 (31%), Positives = 332/646 (51%), Gaps = 64/646 (9%)
Query: 23 TWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
++ M+R + K G + +A LF+ MPER + +Y T++ LM+ +V+ A E++ +
Sbjct: 150 AYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCS 209
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-----LVIGALVNCQRMDLAESYF 137
V + +MI+G+V N L +AL VFH M L VS N VI A + DLA S
Sbjct: 210 VPFFTAMIAGFVLNELPKDALGVFHEM-LSCGVSPNEITLVSVIKACIGAGEFDLAMSIV 268
Query: 138 ----------KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
K +G R+ ++ +R+G AR++FD+M +DV +W ++ Y
Sbjct: 269 GLAMKSNLLDKNLGVRNS-----LITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYA 323
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETCEKTWNSIIS 246
+ G + A + +M +R+ SW L+ A+S + QM + C + S
Sbjct: 324 ELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSS 383
Query: 247 VL--------------IRNGLVK------------------------EAHSYLEKYPYSN 268
VL I N +K +A P N
Sbjct: 384 VLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKN 443
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
I W ++I GY ++ A ++F+ M R+V WN +I G +N + LK F M
Sbjct: 444 IVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLA 503
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
SG SP TF+SVL C+ L +L++G+ +HA+ IK+ + V A+ MYA+ G++ S
Sbjct: 504 SGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDS 563
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
+ F +P + ++W ++I GLA +G+AE+++ LFE M P++ TF+ +L ACS+
Sbjct: 564 SKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSH 623
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
+GLV+ +YF+ M+ + P++ HYTC+VD+L R G + EA +LL +I +
Sbjct: 624 SGLVEHAMHYFEMMQ-ACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKS---EAN 679
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
W ALL AC I+ N ++GE A +R+ EL+ +N+ Y++L+ MY SCG+ +DA + MK
Sbjct: 680 SWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMK 739
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
+KK+ GCSW+QI F S ++ HP + +L+LL E+
Sbjct: 740 GINLKKDGGCSWVQIRGQYQAFFSWETKHPLLPDVYEMLDLLTWEL 785
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 207/475 (43%), Gaps = 82/475 (17%)
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
+GA ++ MV V+ G IV AR+LFD MP + V ++ M+ + G V A +L+
Sbjct: 143 VGAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELY 202
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------P---------ETC------- 237
++ + + +I G V + A+ F +M P + C
Sbjct: 203 RQCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFD 262
Query: 238 ---------------EKTW---NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
+K NS+I++ +R G A ++ ++ SWT ++ Y
Sbjct: 263 LAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVY 322
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
E+G++ A +V + M R+ W ++ + +E + + QM G P+ + F+
Sbjct: 323 AELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFS 382
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
SVL C+ L L GR+IH Q +K+A + VS+A+I MY +C + A + F S+P
Sbjct: 383 SVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQK 442
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
+I+ WNS+I G + + +A ELF++M + + G YA Q R +
Sbjct: 443 NIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISG------YA----QNRQFI 492
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
D +K+ + + A G + ++L AC
Sbjct: 493 DALKS------------------------------FHAMLASGQSPGEITFSSVLLACAS 522
Query: 520 HNNIKVGEIAGERVMELEPNNS-GVYLILTEMYLSCGRREDAKRIFAQM-KENGV 572
++++G++ ++++L S V L++MY G + +KR+F +M K N V
Sbjct: 523 LCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDV 577
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 188/406 (46%), Gaps = 49/406 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R A+ +FD+M RD V+W ++ Y + G L+ A + ++MPER+ ++ T++A
Sbjct: 292 LRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVA 351
Query: 61 GLMQSDNVQGAKEVFDGM---EVRDVVTWNSMISGYVCNGLID-EALRVFHGMPLKDVVS 116
Q N + A ++ M R ++ S + G C L D + R H LK S
Sbjct: 352 RHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLG-ACASLQDLRSGRKIHNQTLKMACS 410
Query: 117 WNL-VIGALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
N+ V AL++ C+++ A+ F + +++ W +++G ++VEA +LF KM
Sbjct: 411 NNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKM 470
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
PA++V +WN +I+GY N +Q I+ L + + A+
Sbjct: 471 PARNVASWNSIISGYAQN---------------------RQFIDALKSFHAMLAS----G 505
Query: 232 QMPETCEKTWNSII---SVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGS 287
Q P E T++S++ + L + K H+ + K +I T + Y + G++ S
Sbjct: 506 QSPG--EITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDS 563
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
+ +VF M R+ W MI GL EN EE + F M +G +P+ TF ++L CS
Sbjct: 564 SKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSH 623
Query: 348 LPTLDLG----RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
++ + A I +T M+ + AR G++ A
Sbjct: 624 SGLVEHAMHYFEMMQACGISPKAKHYTC----MVDVLARAGHLAEA 665
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 140/297 (47%), Gaps = 43/297 (14%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
++ +AQ +F +PQ++ V WN +I GY N + A LF +MP R++ ++N++I+G Q
Sbjct: 428 QLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQ 487
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
+ ++ D ++ ++++M++ G I F + L +L +G +
Sbjct: 488 N------RQFIDALK-----SFHAMLASGQSPGEI-----TFSSVLLACASLCSLEMGKM 531
Query: 125 VNCQ--RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
V+ + ++ + ES F D+ + G + ++++F +MP ++ AW M
Sbjct: 532 VHAKIIKLGIKESIFVGTALSDM---------YAKSGDLDSSKRVFYEMPKRNDVAWTAM 582
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV----NSRRIDAAISYFKQMPETC- 237
I G +NG + LF+ M +T +Q ++ +S ++ A+ YF+ M + C
Sbjct: 583 IQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMM-QACG 641
Query: 238 ----EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA-SWTNVIVGY-----FEMGE 284
K + ++ VL R G + EA L K + A SW ++ EMGE
Sbjct: 642 ISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGE 698
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 48/231 (20%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN-GFLD-----NAMCLFNQMPERDMFTY- 55
N+++ EA+ LF KMP R+ +WN +I GY +N F+D +AM Q P F+
Sbjct: 457 NSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSV 516
Query: 56 --------------------------NTVIAGLMQSD------NVQGAKEVFDGMEVRDV 83
++ G SD ++ +K VF M R+
Sbjct: 517 LLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRND 576
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-SWNLVIGALVNCQRMDLAE---SYFKE 139
V W +MI G NG +E++ +F M + + + L C L E YF+
Sbjct: 577 VAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEM 636
Query: 140 MGARDVAS----WTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAG 185
M A ++ +T MV+ L R G + EA L K+ +K + +W +++
Sbjct: 637 MQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSA 687
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMF----TYNT 57
++ + ++ +F +MP+R+ V W MI+G +NGF + ++ LF M + T+
Sbjct: 557 KSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLA 616
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-- 115
++ S V+ A F+ M+ + + Y C ++D R H +D++
Sbjct: 617 ILFACSHSGLVEHAMHYFEMMQACGI---SPKAKHYTC--MVDVLARAGHLAEAEDLLLK 671
Query: 116 --------SWNLVIGAL---VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEA 164
SW ++ A N + + A +E+ + A + ++ N G+ +A
Sbjct: 672 IESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDA 731
Query: 165 RKL 167
++
Sbjct: 732 AEM 734
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 199/646 (30%), Positives = 321/646 (49%), Gaps = 33/646 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTY 55
R + +A+ LF MP+RD ++WN +I GY + AM L+ QM P R F +
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLH 436
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN-----GLIDEALRVFHGMP 110
+++ S K + + + +R + N ++ + N G + EA VF G
Sbjct: 437 --LLSACANSSAYADGKMIHEDI-LRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQ 493
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+DV+SWN +I + A F+EM ++ I ++ + EA +L +
Sbjct: 494 ARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQ 553
Query: 171 MPAK--------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ + DV N +I Y+ G + A ++F + RD+ SW +I G +
Sbjct: 554 IHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGE 613
Query: 223 IDAAISYFKQMP----ETCEKTWNSIISVLIRNGLVKEAH---SYLEKYPYS-NIASWTN 274
AI F QM + T++SI+ V + + E +Y+ Y +
Sbjct: 614 DMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNA 673
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+I Y + G + A +VF+ M +RD+ WN +I G +N LG+ ++F QM+E P+
Sbjct: 674 LISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPN 733
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+F S+L CS L+ G+++HA+ +K V A+I+MYA+CG+ A F
Sbjct: 734 KFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFD 793
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
++ ++++WN++I A HG A KAL F M KPD TF +LSAC++AGLV +
Sbjct: 794 NIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLE 853
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
G F M+++Y + P HY C+V LLGR EA L+N++ VW LL
Sbjct: 854 GYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQM---PFPPDAAVWETLL 910
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
GACRIH NI + E A ++L N VY++L+ +Y + GR +D +I M+ G++K
Sbjct: 911 GACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRK 970
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILF 620
EPG SWI++++ H F++ D SHP+ + L L E+E F
Sbjct: 971 EPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYF 1016
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 130/536 (24%), Positives = 247/536 (46%), Gaps = 29/536 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+ +A +F +MP+RD ++WN +I Y + GF A LF +M + TY +++
Sbjct: 78 VLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTA 137
Query: 62 LMQSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
++ K++ + RD NS++S Y G + A +VF G+ +DVVS+
Sbjct: 138 CYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSY 197
Query: 118 NLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLF----D 169
N ++G + F +M + D ++ +++ + E +++ +
Sbjct: 198 NTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVE 257
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV-NSRRIDAAIS 228
+ D++ ++ + G V A+ F+ DRD+ + LI L + ++A
Sbjct: 258 EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQ 317
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVK--EA----HSYLEKYPYSNIASWTNVIVG-YFE 281
Y++ + + +S+L K EA HS++ + +S+ N ++ Y
Sbjct: 318 YYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYAR 377
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
G++ A ++F M RD+ WN +I G + E ++ + QM+ G P TF +
Sbjct: 378 CGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHL 437
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L+ C++ G+ IH ++ ++NA++ MY RCG++ A F D+
Sbjct: 438 LSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDV 497
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
ISWNS+I G A HG E A +LF+ M+ + +PD+ITF VLS C ++ G+
Sbjct: 498 ISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGR 557
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ + LQ ++++ R G + +A N+ + ++ + W A++G C
Sbjct: 558 I-TESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDV----MSWTAMIGGC 608
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 144/627 (22%), Positives = 272/627 (43%), Gaps = 84/627 (13%)
Query: 1 MRNARI-----QEAQNLFDKMP-QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER---- 50
MRN R ++ N P + + T+ +++ + L A + QM E
Sbjct: 1 MRNERHCGPDREDVSNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGP 60
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D+F N +I ++ +V A +VF M RDV++WNS+IS Y G +A ++F M
Sbjct: 61 DIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ 120
Query: 111 ----LKDVVSWNLVIGALVNCQRMD----LAESYFKEMGARDVASWTIMVNGLVREGRIV 162
+ + +++ ++ A + ++ + K RD +++ + G +
Sbjct: 121 NAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLP 180
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
AR++F + +DV ++N M+ Y V LF +M ++ K L+++
Sbjct: 181 RARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFT 240
Query: 223 IDAAISYFKQMPE-TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFE 281
+ + K++ + T E+ NS I V T ++
Sbjct: 241 TPSMLDEGKRIHKLTVEEGLNSDIRV------------------------GTALVTMCVR 276
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
G+V SA + F+ RDV V+N +I L ++ E + + +M+ G + + T+ S+
Sbjct: 277 CGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSI 336
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L CS L+ G+ IH+ + + + NA+I+MYARCG++ A F ++P D+
Sbjct: 337 LNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDL 396
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR----- 456
ISWN+II G A +A+ L+++M+ KP +TF+ +LSAC+ + G+
Sbjct: 397 ISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHED 456
Query: 457 ------------------YYFDC---MKNKYFLQPRSAH----YTCVVDLLGRFGLIDEA 491
Y C M+ + + A + ++ + G + A
Sbjct: 457 ILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETA 516
Query: 492 MNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL------ 545
L E++ + +E + ++L C+ +++G+ R+ E SG+ L
Sbjct: 517 YKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE-----SGLQLDVNLGN 571
Query: 546 ILTEMYLSCGRREDAKRIFAQMKENGV 572
L MY+ CG +DA+ +F ++ V
Sbjct: 572 ALINMYIRCGSLQDARNVFHSLQHRDV 598
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 24/280 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYN 56
+R +Q+A+N+F + RD ++W MI G G A+ LF QM T++
Sbjct: 578 IRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFS 637
Query: 57 TVIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+++ S + K+V G E+ D N++IS Y +G + +A VF MP
Sbjct: 638 SILKVCTSSACLDEGKKVIAYILNSGYEL-DTGVGNALISAYSKSGSMTDAREVFDKMPS 696
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGL-----VREGRIV 162
+D+VSWN +I A + +M +DV S+ ++N + EG+ V
Sbjct: 697 RDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRV 756
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
A + K+ DV+ +I+ Y G G A+++F + ++++ +W +IN
Sbjct: 757 HAEIVKRKLQG-DVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGL 815
Query: 223 IDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAH 258
A+ +F M + K T+ SI+S GLV E +
Sbjct: 816 ASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGY 855
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 209/697 (29%), Positives = 333/697 (47%), Gaps = 116/697 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTY 55
+N + A+ +F+ + RD+V+W MI G +NG+ + AM LF Q+ + + F +
Sbjct: 210 FKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEF 269
Query: 56 NTVIAGLM--------------------QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC 95
+ GL+ +S N+ A+++F M RD V++NS+ISG
Sbjct: 270 GKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQ 329
Query: 96 NGLIDEALRVFHGMPL---------------------------------------KDVVS 116
G I+ AL +F M L D+V
Sbjct: 330 QGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVV 389
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWT------IMVNGLV----------REGR 160
++ V C + A +F G D + + + + G+V +
Sbjct: 390 EGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCT 449
Query: 161 IVEARKLFDKMPAK--------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
+ A L +++ + +V +++I Y +G + A +F+++ + D+ SW
Sbjct: 450 TLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTA 509
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEKTWN----SIISVL-----IRNGLVKEAHSYLEK 263
+I G + A++ FK+M + K+ N S IS + G A S L
Sbjct: 510 MIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSG 569
Query: 264 YPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
Y S+ S N +V Y G+V A F+ + +D WN ++ G ++ EE L
Sbjct: 570 Y--SDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNI 627
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F QM ++G ++ TF S ++ +++ + +G+QIH K + T VSNA+IT+YA+
Sbjct: 628 FAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAK 687
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CG I D ISWNS+I G + HG +AL+LFE M+ D P+ +TFVGV
Sbjct: 688 CGTI-------------DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGV 734
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
LSACS+ GLVD+G YF M + L P+ HY CVVDLLGR GL+ A + E+
Sbjct: 735 LSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEM---P 791
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
I+ VW LL AC +H NI +GE A ++ELEP +S Y++++ MY G+ + R
Sbjct: 792 IQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDR 851
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
MK+ GVKKEPG SW+++++ H F +GD +HP+
Sbjct: 852 TRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPR 888
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 142/550 (25%), Positives = 227/550 (41%), Gaps = 107/550 (19%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-------------------- 48
A N+FD+MP R WN + + + LF +M
Sbjct: 116 AVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSG 175
Query: 49 --------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
E F N +I ++ + AK+VF+ ++ RD V+W +
Sbjct: 176 NAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVA 235
Query: 89 MISGYVCNGLIDEALRVF--------------------HGMPLKD-VVSWNLVIGALVN- 126
MISG NG +EA+ +F HG+ LK S V ALV
Sbjct: 236 MISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTL 295
Query: 127 ---CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
+ AE F M RD S+ +++GL ++G I A LF KM D Q + +
Sbjct: 296 YSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNL-DCQKPDCVT 354
Query: 184 AGYLDNGCVGVAE---------------------------DLFQKMHDRDLTSWKQLING 216
L + C V DL+ K D L G
Sbjct: 355 VASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYG 414
Query: 217 LVNSRRIDAAISYFKQM------PETCEKTWNSIISVLIRNG---LVKEAHSYLEKYPYS 267
+++ ++ + F QM P + T+ SI+ G L ++ H+ + K +
Sbjct: 415 QLDN--LNKSFQIFTQMQIEGIVPN--QFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQ 470
Query: 268 -NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
N+ + +I Y + G++ A+K+F + DV W MI G ++D E L F +M
Sbjct: 471 FNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEM 530
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
++ G DN F S ++ C+ + LD GRQIHAQ+ + ++ NA++++YARCG +
Sbjct: 531 QDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKV 590
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
+ A F + D +SWNS++ G A GY E+AL +F +M + + TF +SA
Sbjct: 591 REAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAA 650
Query: 447 SYAGLVDQGR 456
+ V G+
Sbjct: 651 ANIANVRIGK 660
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 197/459 (42%), Gaps = 90/459 (19%)
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI------------ 249
++ R +LI+ + ++ A++ F +MP WN I + I
Sbjct: 92 LNSRSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLF 151
Query: 250 RNGLVKE--------------------AHSYLEKYPYSNIAS--------WTNVIVGYFE 281
R L K + ++E+ I S +I YF+
Sbjct: 152 RRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFK 211
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
G + SA KVFE + RD W MI GL +N EE + F Q+ V
Sbjct: 212 NGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------V 257
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L+ C+ + + G+Q+H +K + T V NA++T+Y+R GN+ SA F + D
Sbjct: 258 LSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDR 317
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF-- 459
+S+NS+I GLA GY +AL LF++M L KPD +T +LSAC+ G + G+ +
Sbjct: 318 VSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSY 377
Query: 460 --------DCMKNKYFL-------QPRSAH--YTCVVDLLGRFGLIDEAMNLLNEIRADG 502
D + L ++AH + C G+ ++++ + +++ +G
Sbjct: 378 AIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLC----YGQLDNLNKSFQIFTQMQIEG 433
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAK 561
I + + ++L C +GE +V++ N V +L +MY G+ + A
Sbjct: 434 IVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHAL 493
Query: 562 RIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
+IF ++KEN V SW + ++G + H KF
Sbjct: 494 KIFRRLKENDV-----VSWTAM-------IAGYTQHDKF 520
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/544 (21%), Positives = 223/544 (40%), Gaps = 84/544 (15%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
++ +DG+++ D Y+ G ++ A+ VF MP++ + WN + + + M
Sbjct: 94 SRSFYDGLKLIDF---------YLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLM 144
Query: 131 DLAESYFKEMGARDVAS----WTIMVNGLVREGRIVEARKLFDKMPAKDVQA-------- 178
F+ M ++V + +++ G G V R +++ AK + +
Sbjct: 145 GRVPGLFRRMLTKNVEFDERIFAVVLRGC--SGNAVSFR-FVEQIHAKTITSGFESSTFI 201
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETC 237
N +I Y NG + A+ +F+ + RD SW +I+GL + + A+ F Q+ C
Sbjct: 202 CNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSAC 261
Query: 238 EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMT 296
K G K+ H + K +S+ N +V Y G + SA ++F M+
Sbjct: 262 TKV------EFFEFG--KQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMS 313
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
RD +N +I GL + L F +M PD T S+L+ C+ + L G+Q
Sbjct: 314 QRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQ 373
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
H+ AIK V +++ +Y +C +I++A H+ + L
Sbjct: 374 FHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTA---------HEFFLCYGQLDNL----- 419
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNKYFLQPRSAHY 475
K+ ++F +M++ P+ T+ +L C+ G D G + + +K + Q
Sbjct: 420 -NKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGF--QFNVYVS 476
Query: 476 TCVVDLLGRFGLID-------------------------------EAMNLLNEIRADGIE 504
+ ++D+ + G +D EA+NL E++ GI+
Sbjct: 477 SVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIK 536
Query: 505 VSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI 563
+ + + AC + G +I + + ++ + L +Y CG+ +A
Sbjct: 537 SDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAA 596
Query: 564 FAQM 567
F Q+
Sbjct: 597 FDQI 600
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 261/461 (56%), Gaps = 13/461 (2%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G +V+A K+FD+M +D+ +WN+MI+GY+ G A +LF KM +RD SW +I+G V
Sbjct: 167 GSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCV 226
Query: 219 NSRRIDAAISYFKQMPE-------TCEKTWNSIISVLIRN-GLVKEAHSYLEKYPY-SNI 269
R + A+ ++ M + C + S I + + K+ H ++ + S+
Sbjct: 227 QHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDE 286
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
W +++ Y + G + A +F+ M RDV W MI +N EEG F + S
Sbjct: 287 VVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNS 346
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
P++ TF VL C+DL DLG+QIHA +++ + F++ ++A++ MY++CG+I++A
Sbjct: 347 NIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENA 406
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F +P D+ SW S++ G A HG +KAL FE + + KPD I F+GVLSAC++A
Sbjct: 407 KSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHA 466
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
GLVD+G YF +K K+ L HY C++DLL R G EA +++NE+ I+ +
Sbjct: 467 GLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEM---PIKPDKYI 523
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
W ALLG CRIH N+++ + A + + E+EP N Y+ L +Y S G R + I M
Sbjct: 524 WAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDS 583
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHR-LRYLLNL 609
G+ K+PG SWI+I HVF GD+SHPK L YL L
Sbjct: 584 RGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSEL 624
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 200/460 (43%), Gaps = 76/460 (16%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDN 67
+A+ +FD+M RD +WN+MI GY K G + A LF++MP RD F++ +I+G +Q +
Sbjct: 171 DAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNR 230
Query: 68 VQGAKEVFDGMEVRDVVTWNS-MISGYVCNGLIDEALRV---FHGMPLK-----DVVSWN 118
+ A E++ M+ D N IS + +L + HG ++ D V W
Sbjct: 231 PEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWC 290
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
++ C ++ A F +M RDV SWT M++ ++ GR E LF + ++
Sbjct: 291 SLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMP 350
Query: 179 WNLMIAGYLDNGCVGV-AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
+ AG L N C + AEDL +++H + V +A S M C
Sbjct: 351 NDFTFAGVL-NACADLAAEDLGKQIHAYMVR---------VGFDSFSSAASALVHMYSKC 400
Query: 238 EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
G ++ A S E P ++ SWT+++VGY + G+ A+ FEL+
Sbjct: 401 --------------GDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLL- 445
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
+SG PD F VL+ C+ +D G +
Sbjct: 446 ------------------------------KSGTKPDGIAFIGVLSACAHAGLVDKGLE- 474
Query: 358 HAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYH 414
+ +IK T+ + +I + AR G A + +PI D W +++ G H
Sbjct: 475 YFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIH 534
Query: 415 GYAEKALELFERM--RLTDFKPDD-ITFVGVLSACSYAGL 451
G LEL +R L + +P++ T+V + + + AG+
Sbjct: 535 G----NLELAKRAAKSLFEIEPENPATYVTLANIYASAGM 570
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 133/322 (41%), Gaps = 57/322 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTV-- 58
++ ++A+NLFDKMP RD +W +I G ++ + A+ L+ M + D N
Sbjct: 195 VKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTI 254
Query: 59 ---------IAGLMQSDNVQG-----------------------------AKEVFDGMEV 80
I L + G A+ +FD ME
Sbjct: 255 SSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEE 314
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
RDVV+W +MI Y+ NG +E +F + +++ + ++N AE K++
Sbjct: 315 RDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQI 374
Query: 141 GARDV--------ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG-- 190
A V ++ + +V+ + G I A+ +F+ +P D+ +W ++ GY +G
Sbjct: 375 HAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQH 434
Query: 191 --CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT-----WNS 243
+ E L + D ++ +++ ++ +D + YF + E T +
Sbjct: 435 DKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYAC 494
Query: 244 IISVLIRNGLVKEAHSYLEKYP 265
II +L R G EA S + + P
Sbjct: 495 IIDLLARAGQFTEAESIINEMP 516
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 114/293 (38%), Gaps = 47/293 (16%)
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
G+ L+ VQ+ P + + ++L C L G+Q+HA IK + + +SN
Sbjct: 100 GQSRLREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAH-IKTSGSIGLYISNR 158
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
++ MYA+CG++ A F + D+ SWN +I G G EKA LF++M D
Sbjct: 159 LLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMP----NRD 214
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
+ ++ ++S C ++ + M+ + + + + + +
Sbjct: 215 NFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIH 274
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
I G++ VW +LL +MY CG
Sbjct: 275 GHIMRMGLDSDEVVWCSLL----------------------------------DMYGKCG 300
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
E+A+ IF +M+E V SW + H +L F R+L+N
Sbjct: 301 SIEEARYIFDKMEERDV-----VSWTTMI---HTYLKNGRREEGFALFRHLMN 345
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 171/532 (32%), Positives = 287/532 (53%), Gaps = 16/532 (3%)
Query: 99 IDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV-- 156
+ EAL++ H + ++ +I + + + + + + + ++N L+
Sbjct: 55 LKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEM 114
Query: 157 --REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLI 214
+ +++++KLFD+MP +D+ +WN++I+GY G + A+ LF KM +RD SW +I
Sbjct: 115 YAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMI 174
Query: 215 NGLVNSRRIDAAISYFKQMPETCEKTWN--SIISVLIRNGLV------KEAHSYLEKYPY 266
+G V R + A+ F+ M + N ++ S L V KE H Y+ +
Sbjct: 175 SGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGL 234
Query: 267 -SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
S+ W+ + Y + G + A +F+ M RD+ W MI ++ +EG F
Sbjct: 235 DSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFAD 294
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
+ SG P+ TF+ VL C++ + +LG+++H ++ + F+ ++A++ MY++CGN
Sbjct: 295 LLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGN 354
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+ SA F P D+ SW S+I G A +G ++A+ FE + + +PD ITFVGVLSA
Sbjct: 355 MVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSA 414
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
C++AGLVD+G YF +K +Y L + HY C++DLL R G DEA N+++++ ++
Sbjct: 415 CAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKM---SMKP 471
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
+W +LLG CRIH N+K+ + A E + E+EP N Y+ L +Y + G + +I
Sbjct: 472 DKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRK 531
Query: 566 QMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
M + GV K+PG SWI I HVFL GD SHPK + L L ++ E
Sbjct: 532 TMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEE 583
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 199/453 (43%), Gaps = 37/453 (8%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERD----MFTYNTVIA 60
R++EA + ++ + ++ +I+ K+ L + + +F N ++
Sbjct: 54 RLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLE 113
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
+ D++ ++++FD M RD+ +WN +ISGY GL+ EA +F MP +D SW +
Sbjct: 114 MYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAM 173
Query: 121 IGALVNCQRMDLAESYFKEMGARD--------VASWTIMVNGL--VREGRIVEARKLFDK 170
I V R + A F+ M D V+S + +R G+ + +
Sbjct: 174 ISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTG 233
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
+ + +V W+ + Y G + A +F KM DRD+ +W +I+ R F
Sbjct: 234 LDSDEV-VWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLF 292
Query: 231 KQMPETC----EKTWNSIISVLIRNG---LVKEAHSYLEKY---PYSNIASWTNVIVGYF 280
+ + E T++ +++ L K+ H Y+ + P+S AS ++ Y
Sbjct: 293 ADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAAS--ALVHMYS 350
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G + SA +VF+ D+ W +I G +N +E +++F + +SG PD+ TF
Sbjct: 351 KCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVG 410
Query: 341 VLTICSDLPTLDLGRQ-IHAQAIKIARNQFTTVSNAMITMYARCGNIQSA---LLEFSSV 396
VL+ C+ +D G H+ + +I + AR G A + + S
Sbjct: 411 VLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMK 470
Query: 397 PIHDIISWNSIICGLAYHG---YAEKALE-LFE 425
P D W S++ G HG A++A E LFE
Sbjct: 471 P--DKFLWASLLGGCRIHGNLKLAQRAAEALFE 501
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 175/554 (31%), Positives = 314/554 (56%), Gaps = 25/554 (4%)
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVI 121
D + A VF+ ++ +++ WN+M G+ + AL+++ M L + ++ ++
Sbjct: 39 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLL 98
Query: 122 GALVNCQRMDLAES---YFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
+ + + + ++G D+ T +++ V+ GR+ +A K+FD+ P +DV
Sbjct: 99 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVV 158
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
++ +I GY G + A+ +F ++ +D+ SW +I+G + A+ FK M +T
Sbjct: 159 SYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 218
Query: 238 ----EKTWNSIISVLIRNG---LVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAI 289
E T +++S ++G L ++ HS+++ + + SN+ +I Y + GE+ +A
Sbjct: 219 VRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETAC 278
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
+FE + +DV WN +I G +L +E L F +M SG +P++ T S+L C+ L
Sbjct: 279 GLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 338
Query: 350 TLDLGRQIHAQAIKIARN--QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
+D+GR IH K + +++ ++I MYA+CG+I++A F+S+ + SWN++
Sbjct: 339 AIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAM 398
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
I G A HG A+ + ++F RMR +PDDITFVG+LSACS++G++D GR+ F M Y
Sbjct: 399 IFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYK 458
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLN--EIRADGIEVSPTVWGALLGACRIHNNIKV 525
+ P+ HY C++DLLG GL EA ++N E+ DG+ +W +LL AC++H N+++
Sbjct: 459 MTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV-----IWCSLLKACKMHGNVEL 513
Query: 526 GEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
GE + ++++EP N G Y++L+ +Y + GR + A + + G+KK PGCS I+I+
Sbjct: 514 GESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDS 573
Query: 586 GGHVFLSGDSSHPK 599
H F+ GD HP+
Sbjct: 574 VVHEFIIGDKFHPR 587
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 219/505 (43%), Gaps = 82/505 (16%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D +I Y +NG L++A +F++ P RD+ +Y +I G ++ A+++FD +
Sbjct: 125 DLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIP 184
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKE 139
V+DVV+WN+MISGY G EAL +F M +V + +V+ A+S E
Sbjct: 185 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA----CAQSGSIE 240
Query: 140 MGARDVASWT---------IMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
+G R V SW +VN L+ + G + A LF+ +P KDV +WN +I GY
Sbjct: 241 LG-RQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGY 299
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIIS 246
A LFQ+M + S ++ +P C I
Sbjct: 300 THMNLYKEALLLFQEM---------------LRSGETPNDVTMLSILP-ACAHLGAIDIG 343
Query: 247 VLIRNGLVKEAHSYLEK--YPYSNIASW-TNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
I H Y++K +N +S T++I Y + G++ +A +VF + + ++ W
Sbjct: 344 RWI--------HVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 395
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
N MIFG + + F +M+++G PD+ TF +L+ CS LDLGR I
Sbjct: 396 NAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHI------ 449
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
+S ++ P + + +I L + G ++A E+
Sbjct: 450 ----------------------FRSMTQDYKMTP--KLEHYGCMIDLLGHSGLFKEAEEM 485
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS-AHYTCVVDLL 482
M + +PD + + +L AC G V+ G + +N ++P + Y + ++
Sbjct: 486 INTMEM---EPDGVIWCSLLKACKMHGNVELGESF---AQNLIKIEPENPGSYVLLSNIY 539
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSP 507
G +E N + G++ P
Sbjct: 540 ATAGRWNEVANTRALLNDKGMKKVP 564
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 116/509 (22%), Positives = 213/509 (41%), Gaps = 95/509 (18%)
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A S F+ + ++ W M G V A KL+ M + + + L +
Sbjct: 44 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 103
Query: 193 GVAEDLFQKMH--------DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI 244
A Q++H D DL LI+ V + R++ A F + P ++ ++
Sbjct: 104 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTAL 163
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
I G ++ A ++ P ++ SW +I GY E G
Sbjct: 164 IKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNY------------------- 204
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
+E L+ F M ++ PD +T +V++ C+ +++LGRQ+H+
Sbjct: 205 ------------KEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDH 252
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+ NA+I +Y++CG +++A F +P D+ISWN++I G + ++AL LF
Sbjct: 253 GFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLF 312
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY---YFDCMKNKYFLQPRSAHYTCVVDL 481
+ M + P+D+T + +L AC++ G +D GR+ Y D K + S+ T ++D+
Sbjct: 313 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID--KRLKGVANASSLRTSLIDM 370
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
+ G I+ A + N I + S + W A++ +H
Sbjct: 371 YAKCGDIEAAHQVFNSI----LHKSLSSWNAMIFGFAMH--------------------- 405
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE--------PGCSWIQIND-GGHVFLS 592
GR + + IF++M++NG++ + CS + D G H+F S
Sbjct: 406 -------------GRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 452
Query: 593 GDSSH---PKFHRLRYLLNLL-HTEIERE 617
+ PK +++LL H+ + +E
Sbjct: 453 MTQDYKMTPKLEHYGCMIDLLGHSGLFKE 481
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 151/346 (43%), Gaps = 89/346 (25%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N R+++A +FD+ P RD V++ +I+GY G+++NA +F+++P +D+ ++N +I+
Sbjct: 137 VQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMIS 196
Query: 61 GLMQSDNVQGAKEVFDGMEV--------------------------RDVVTW-------- 86
G ++ N + A E+F M R V +W
Sbjct: 197 GYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGS 256
Query: 87 -----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
N++I Y G ++ A +F G+P KDV+SWN +IG + A F+EM
Sbjct: 257 NLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML 316
Query: 141 ---------------------GARDVASW-------------------TIMVNGLVREGR 160
GA D+ W T +++ + G
Sbjct: 317 RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGD 376
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLING 216
I A ++F+ + K + +WN MI G+ +G + D+F +M + D ++ L++
Sbjct: 377 IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSA 436
Query: 217 LVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVKEA 257
+S +D F+ M + + T + +I +L +GL KEA
Sbjct: 437 CSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 482
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 198/642 (30%), Positives = 317/642 (49%), Gaps = 33/642 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTY 55
R + A+ LF+ MP+RD ++WN +I GY + AM L+ QM P R F +
Sbjct: 432 RCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLH 491
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN-----GLIDEALRVFHGMP 110
+++ S K + + + +R + N ++ + N G I EA VF G
Sbjct: 492 --LLSACTNSSAYSDGKMIHEDI-LRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTR 548
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+D++SWN +I + A F EM + I ++ + EA +L +
Sbjct: 549 ARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQ 608
Query: 171 MP--------AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ DV N +I Y+ G + A ++F + R++ SW +I G +
Sbjct: 609 IHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGE 668
Query: 223 IDAAISYFKQMP----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNV--- 275
A F QM + + T++SI+ + + + E + S T V
Sbjct: 669 DRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNA 728
Query: 276 -IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
I Y + G + A KVF+ M RD+ WN MI G +N LG L+F QM+E G +
Sbjct: 729 LISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLN 788
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+F S+L CS L+ G+++HA+ +K V A+I+MYA+CG+++ A F
Sbjct: 789 KFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFD 848
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+ ++++WN++I A HG A KAL+ F M KPD TF +LSAC+++GLV +
Sbjct: 849 NFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVME 908
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
G F +++++ L P HY C+V LLGR G EA L+N++ VW LL
Sbjct: 909 GNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQM---PFPPDAAVWETLL 965
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
GACRIH N+ + E A ++L N VY++L+ +Y + GR +D +I M+ G++K
Sbjct: 966 GACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRK 1025
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
EPG SWI++++ H F++ D SHP+ + L L E+ER
Sbjct: 1026 EPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMER 1067
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 154/648 (23%), Positives = 266/648 (41%), Gaps = 117/648 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----------------- 48
+ +A +F KMP+RD ++WN +I Y + GF A LF +M
Sbjct: 133 VSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTA 192
Query: 49 ----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
+RD N+++ + +++ A++VF G+ RDVV++
Sbjct: 193 CCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSY 252
Query: 87 NSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVNCQRMDLAESYFK--- 138
N+M+ Y ++E + +F G+P V NL + A +D + K
Sbjct: 253 NTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINL-LDAFTTPSMLDEGKRIHKLAV 311
Query: 139 -EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
E D+ T + VR G + A++ + +DV +N +IA +G A +
Sbjct: 312 NEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFE 371
Query: 198 LFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
+ +M + T++ ++N S+ + A LI + +
Sbjct: 372 QYYQMRSDGVVMNRTTYLSVLNACSTSKALGAG--------------------ELIHSHI 411
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
+ HS S++ ++I Y G++ A ++F M RD+ WN +I G
Sbjct: 412 SEVGHS-------SDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARR 464
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
+ E +K + QM+ G P TF +L+ C++ G+ IH ++ ++
Sbjct: 465 EDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLA 524
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
NA++ MY RCG+I A F DIISWNS+I G A HG E A +LF M+ +
Sbjct: 525 NALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLE 584
Query: 434 PDDITFVGVLSACSYAGLVDQGRY-----------------------YFDC--MKNKY-- 466
PD ITF VL C ++ GR Y C +++ Y
Sbjct: 585 PDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEV 644
Query: 467 FLQPRSAHYTCVVDLLGRF---GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
F R + ++G F G +A L +++ DG + + + ++L AC +
Sbjct: 645 FHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACL 704
Query: 524 KVGEIAGERVM----ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
G+ ++ EL+ +GV L Y G DA+++F +M
Sbjct: 705 DEGKKVIAHILNSGYELD---TGVGNALISAYSKSGSMTDARKVFDKM 749
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 143/626 (22%), Positives = 264/626 (42%), Gaps = 89/626 (14%)
Query: 2 RNARIQEAQNLFDKMP-QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
R + ++ N + P + + + +++ + L A + QM E D+F N
Sbjct: 62 RGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSN 121
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+I ++ +V A +VF M RDV++WNS+IS Y G +A ++F M +
Sbjct: 122 LLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIP 181
Query: 117 WNLVIGALVN--CQRMDLA-----ESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKLF 168
+ +++ C +L S E G RD ++N + + AR++F
Sbjct: 182 SKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVF 241
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRID 224
+ +DV ++N M+ Y V LF +M D ++ L++ +D
Sbjct: 242 SGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLD 301
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE 284
I + + GL S+I T + + G+
Sbjct: 302 EG---------------KRIHKLAVNEGL------------NSDIRVGTALATMFVRCGD 334
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
V A + E RDV V+N +I L ++ EE + + QM+ G + T+ SVL
Sbjct: 335 VAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNA 394
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
CS L G IH+ ++ + + N++I+MYARCG++ A F+++P D+ISW
Sbjct: 395 CSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISW 454
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY-YFDCMK 463
N+II G A +A++L+++M+ KP +TF+ +LSAC+ + G+ + D ++
Sbjct: 455 NAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILR 514
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN--------------------------- 496
+ ++ ++++ R G I EA N+
Sbjct: 515 SG--IKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAY 572
Query: 497 ----EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL------I 546
E++ +G+E + ++L C+ +++G ++E SG+ L
Sbjct: 573 KLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIE-----SGLQLDVNLGNA 627
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGV 572
L MY+ CG +DA +F ++ V
Sbjct: 628 LINMYIRCGSLQDAYEVFHSLRHRNV 653
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 145/335 (43%), Gaps = 58/335 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFT 54
+R +Q+A +F + R+ ++W MI G+ G A LF QM P + F+
Sbjct: 633 IRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFS 692
Query: 55 Y---------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVR 81
N +I+ +S ++ A++VFD M R
Sbjct: 693 SILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNR 752
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV----SWNLVIGALVNCQRMDLAESYF 137
D+++WN MI+GY NGL AL+ + M + VV S+ ++ A + ++ +
Sbjct: 753 DIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVH 812
Query: 138 KEMGAR----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
E+ R DV +++ + G + EA+++FD K+V WN MI Y +G
Sbjct: 813 AEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLAS 872
Query: 194 VAEDLFQKMHDR----DLTSWKQLI-----NGLV-NSRRIDAAISYFKQMPETCEKTWNS 243
A D F M D +++ ++ +GLV RI +++ + T E +
Sbjct: 873 KALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEH-YGC 931
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
++ +L R G +EA + + + P+ A+ ++G
Sbjct: 932 LVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLG 966
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 206/653 (31%), Positives = 328/653 (50%), Gaps = 82/653 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGL-- 62
A+ +F+ M QRD V++N +I G + G+ D A+ LF +M + D T ++++
Sbjct: 325 AEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSS 384
Query: 63 ------------------MQSD---------------NVQGAKEVFDGMEVRDVVTWNSM 89
M SD +++ A E F E +VV WN M
Sbjct: 385 VGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVM 444
Query: 90 ISGYVCNGLID---EALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEMGA 142
+ Y GL+D E+ ++F M ++ + ++ ++ + + +DL E ++
Sbjct: 445 LVAY---GLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLK 501
Query: 143 R----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+V +++++ + G++ A K+F ++ KDV +W MIAGY + A +L
Sbjct: 502 TGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNL 561
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
F++M D+ + S G ++ A I Q ++ H
Sbjct: 562 FKEMQDQGIHSDNI---GFASAISACAGIQALNQG---------------------QQIH 597
Query: 259 SYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ YS+ S N +V Y G+V A F+ + ++D WN +I G ++ E
Sbjct: 598 AQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCE 657
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E L F QM ++G ++ TF ++ +++ + LG+QIHA IK + T VSN +I
Sbjct: 658 EALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLI 717
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
T+YA+CGNI A +F +P + ISWN+++ G + HG+ KAL LFE M+ P+ +
Sbjct: 718 TLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHV 777
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
TFVGVLSACS+ GLVD+G YF M+ + L P+ HY CVVDLLGR GL+ A + E
Sbjct: 778 TFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEE 837
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
+ I+ V LL AC +H NI +GE A ++ELEP +S Y++L+ MY G+
Sbjct: 838 MP---IQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKW 894
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL-RYLLNL 609
R MK+ GVKKEPG SWI++N+ H F +GD HP ++ YL +L
Sbjct: 895 GCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDL 947
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 161/619 (26%), Positives = 268/619 (43%), Gaps = 58/619 (9%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGLMQ 64
A +FD+MP R WN ++ + + LF +M + D TY V+ G
Sbjct: 122 AVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGG 181
Query: 65 SD------NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
D A+ + G E + N +I Y NG ++ A +VF G+ +D VSW
Sbjct: 182 GDVPFHCVEKIHARTITHGYE-NSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWV 240
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP------ 172
++ L + A F +M V + + ++ VE K+ +++
Sbjct: 241 AMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQ 300
Query: 173 --AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
+ + N ++ Y G AE +F M RD S+ LI+GL D A+ F
Sbjct: 301 GFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELF 360
Query: 231 KQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFEM 282
K+M C K T S++S G + K+ HSY K S+ ++ Y +
Sbjct: 361 KKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKC 420
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
++ +A + F T +V +WNVM+ G D E K F QM+ G P+ T+ S+L
Sbjct: 421 SDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSIL 480
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
CS L +DLG QIH Q +K VS+ +I MYA+ G + AL F + D++
Sbjct: 481 RTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVV 540
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR------ 456
SW ++I G A H +AL LF+ M+ D+I F +SAC+ ++QG+
Sbjct: 541 SWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQA 600
Query: 457 -----------------YYFDC--MKNKYF-----LQPRSAHYTCVVDLLGRFGLIDEAM 492
Y C +++ YF + + ++ + G +EA+
Sbjct: 601 CVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEAL 660
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMY 551
+L +++ G E++ +G + A N+K+G +I + + + V +L +Y
Sbjct: 661 SLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLY 720
Query: 552 LSCGRREDAKRIFAQMKEN 570
CG +DA+R F +M E
Sbjct: 721 AKCGNIDDAERQFFEMPEK 739
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 237/508 (46%), Gaps = 57/508 (11%)
Query: 138 KEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMP----AKDVQAWNLMIAGYLDNGCV 192
+E G R + ++ +++G + G + KL K+ +V ++ Y+ G +
Sbjct: 60 EERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDL 119
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN- 251
A +F +M R L+ W ++++ V + + F++M + K + ++R
Sbjct: 120 DGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGC 179
Query: 252 -------GLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVW 303
V++ H+ + Y N N ++ YF+ G + SA KVF+ + RD W
Sbjct: 180 GGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSW 239
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
M+ GL ++ EE + F QM SG P F+SVL+ C+ + +G Q+H +K
Sbjct: 240 VAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLK 299
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
+ T V NA++T+Y+R GN A F+++ D +S+NS+I GL+ GY++KALEL
Sbjct: 300 QGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALEL 359
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-----------------------YYFD 460
F++M L KPD +T +LSACS G + G+ Y
Sbjct: 360 FKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVK 419
Query: 461 C----MKNKYFLQPRSAHYTCVVDLLGRFGLID---EAMNLLNEIRADGIEVSPTVWGAL 513
C +++FL + + +L +GL+D E+ + +++ +GIE + + ++
Sbjct: 420 CSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSI 479
Query: 514 LGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
L C + +GE +V++ N V +L +MY G+ + A +IF ++KE V
Sbjct: 480 LRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDV 539
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHPKF 600
SW + ++G + H KF
Sbjct: 540 -----VSWTAM-------IAGYAQHEKF 555
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/544 (22%), Positives = 230/544 (42%), Gaps = 69/544 (12%)
Query: 67 NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN--LVIGAL 124
++ GA VFD M VR + WN ++ +V + L +F M L++ V + G L
Sbjct: 118 DLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRM-LQEKVKPDERTYAGVL 176
Query: 125 VNCQRMDLAESYFKEMGARDVA----SWTIMVNGLV----REGRIVEARKLFDKMPAKDV 176
C D+ +++ AR + + + N L+ + G + A+K+FD + +D
Sbjct: 177 RGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDS 236
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
+W M++G +GC A LF +MH +G+ + I F +
Sbjct: 237 VSWVAMLSGLSQSGCEEEAVLLFCQMH----------TSGVYPTPYI------FSSVLSA 280
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
C K + + ++K+ S LE Y + + + Y +G A +VF M
Sbjct: 281 CTKVEFYKVGEQLHGLVLKQGFS-LETYVCNALVTL------YSRLGNFIPAEQVFNAML 333
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
RD +N +I GL + ++ L+ F +M PD T S+L+ CS + L +G+Q
Sbjct: 334 QRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ 393
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
H+ AIK + + A++ +Y +C +I++A F S +++ WN ++
Sbjct: 394 FHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDN 453
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNKYFLQPRSAHY 475
++ ++F +M++ +P+ T+ +L CS VD G + + +K + Q
Sbjct: 454 LNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGF--QFNVYVS 511
Query: 476 TCVVDLLGRFGLID-------------------------------EAMNLLNEIRADGIE 504
+ ++D+ + G +D EA+NL E++ GI
Sbjct: 512 SVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIH 571
Query: 505 VSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI 563
+ + + AC + G +I + + ++ V L +Y CG+ DA
Sbjct: 572 SDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFA 631
Query: 564 FAQM 567
F ++
Sbjct: 632 FDKI 635
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 32/247 (12%)
Query: 313 NDLGE-EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
ND GE G+ F M+E G ++ T+ +L C G ++H + +K+
Sbjct: 45 NDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVV 104
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
+ ++ +Y G++ A+ F +P+ + WN ++ A + L LF RM
Sbjct: 105 LCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEK 164
Query: 432 FKPDDITFVGVLSACS------------YAGLVDQG--RYYFDC-------MKNKYF--- 467
KPD+ T+ GVL C +A + G F C KN +
Sbjct: 165 VKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSA 224
Query: 468 ------LQPR-SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
LQ R S + ++ L + G +EA+ L ++ G+ +P ++ ++L AC
Sbjct: 225 KKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKV 284
Query: 521 NNIKVGE 527
KVGE
Sbjct: 285 EFYKVGE 291
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 56/241 (23%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTY-- 55
R ++++A FDK+ +D ++WN +I G+ ++G + A+ LF+QM E + FT+
Sbjct: 621 RCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGP 680
Query: 56 ---------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRD 82
N +I + N+ A+ F M ++
Sbjct: 681 AVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKN 740
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQRMDLAE---SYFK 138
++WN+M++GY +G +AL +F M V+ ++ +G L C + L + YF+
Sbjct: 741 EISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQ 800
Query: 139 EMGARDV-------ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
M R+V + +V+ L R G + AR+ ++MP + + M+ L + C
Sbjct: 801 SM--REVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQP----DAMVCRTLLSAC 854
Query: 192 V 192
+
Sbjct: 855 I 855
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 17/170 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I +A+ F +MP+++ ++WN M+ GY ++G A+ LF M + + + G++ +
Sbjct: 726 IDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSA 785
Query: 66 DN----VQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLK-D 113
+ V + F M R+V Y C +GL+ A R MP++ D
Sbjct: 786 CSHVGLVDEGIKYFQSM--REVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPD 843
Query: 114 VVSWNLVIGALVNCQRMDLAE---SYFKEMGARDVASWTIMVNGLVREGR 160
+ ++ A + + +D+ E S+ E+ +D A++ ++ N G+
Sbjct: 844 AMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGK 893
>gi|302764988|ref|XP_002965915.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
gi|300166729|gb|EFJ33335.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
Length = 912
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 200/733 (27%), Positives = 347/733 (47%), Gaps = 124/733 (16%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
N + A+ +FD++P + V+WN +I G+ ++GF+ NA +F +MP ++N++I G
Sbjct: 91 NGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWNSMITGY 150
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
QS ++ A +FD +V++WN++I+GY N +I EA VF P +D +SWN ++
Sbjct: 151 AQSGDLASATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVFDRAPGRDKISWNAMLT 210
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
A +D A+ F +D+ S T+M+ + + A ++F MP ++ +++ M
Sbjct: 211 AYAQSGDLDSAKEVFDRTPQQDIVSCTLMIKACAVQEILGHAVEIFAAMPDRNAVSYSFM 270
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKTW 241
I Y+D G +G AE+L ++M +D T W +++ ++ A F + E +W
Sbjct: 271 IQIYIDQGKIGEAENLSRRMPQQDPTLWTSMLSAYSRHGLVEEARRIFDRAARRDDEVSW 330
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N+++S + G + A S E+ P ++ +WT +I + G++ A +++L+ RD+
Sbjct: 331 NALLSAYAQAGHLHLARSTFERMPRHDVVAWTALIAVSGQNGQLEEAEVLYDLIPERDLV 390
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESG---------------------------PSPD 334
W +I G N E + + M E P PD
Sbjct: 391 AWTALIQAYGVNGKLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTLPDPD 450
Query: 335 NATFTSVLTICSDLPTLDLGRQI--------------------------HAQAIKIARNQ 368
+T TS++ + + R++ HA+A+ + Q
Sbjct: 451 QSTRTSMIVAYAQNGYIKDAREMFDSIKNPDVIACNAMMEAYSSAQMLDHAKAMFDSIKQ 510
Query: 369 FTTVS-NAMITMYARCGNIQSALLEFSSVPIHDIIS------------------------ 403
T VS N M+ YA+ GN+ A F S+P +++S
Sbjct: 511 KTLVSWNTMVAAYAQAGNLDEAKSIFDSIPHKNVVSHNVMIVAYAHNMDLAEARRIFYSM 570
Query: 404 -------WNSIICGLAYHGYAEKALELFER------------------------------ 426
W +++ +A HG +A ELF +
Sbjct: 571 DEKDTVTWTAMVAMVAQHGRLAEAQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRYLY 630
Query: 427 -MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRF 485
MR KPD ITF+G+L ACS+ GLV++G +F M+ + L P HY +VD+LGR
Sbjct: 631 VMRNEGAKPDHITFMGILIACSHVGLVEEGWTHFTSMQGDHGLIPWREHYCRMVDVLGRA 690
Query: 486 GLIDEAMNLLNEIRADGIEVSPTV--WGALLGACRIHNNIKVGEIAGERVMELEPNNSGV 543
G + A LL + + P V WG+LLG+C+ H+++K+G A E +++ + +SG
Sbjct: 691 GQLGAARELL-----ETMPFIPDVGAWGSLLGSCKTHSDVKLGTRAAESLLQFDDQSSGP 745
Query: 544 YLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL 603
Y++L MY S GR DA + +MK GVKK+PG S I+++ H F++G++SHP+ +
Sbjct: 746 YVLLANMYSSVGRVADALAVRNRMKARGVKKQPGVSLIRVDGVLHRFVAGEASHPRHQEI 805
Query: 604 RYLLNLLHTEIER 616
L+ L +++
Sbjct: 806 LSELSRLQELMKK 818
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/568 (23%), Positives = 237/568 (41%), Gaps = 50/568 (8%)
Query: 2 RNARIQEAQNLFDKMPQRD-TVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
R+ ++EA+ +FD+ +RD V+WN ++ Y + G L A F +MP D+ + +IA
Sbjct: 307 RHGLVEEARRIFDRAARRDDEVSWNALLSAYAQAGHLHLARSTFERMPRHDVVAWTALIA 366
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
Q+ ++ A+ ++D + RD+V W ++I Y NG + E+ RV+ MP ++ VS +
Sbjct: 367 VSGQNGQLEEAEVLYDLIPERDLVAWTALIQAYGVNGKLTESKRVYALMPERNRVSHTAM 426
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I A + A + D ++ T M+ + G I +AR++FD + DV A N
Sbjct: 427 IIAYSQNGEVVQARKMLDTLPDPDQSTRTSMIVAYAQNGYIKDAREMFDSIKNPDVIACN 486
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
M+ Y + A+ +F + + L SW ++ + +D A S F +P +
Sbjct: 487 AMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPHKNVVS 546
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
N +I N + EA + +WT ++ + G + A ++F M R+V
Sbjct: 547 HNVMIVAYAHNMDLAEARRIFYSMDEKDTVTWTAMVAMVAQHGRLAEAQELFAKMPYRNV 606
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
WN +I G+ G +++ M+ G PD+ TF +L CS H
Sbjct: 607 VSWNSLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGILIACS-----------HVG 655
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG----LAYHGY 416
++ FT++ H +I W C L G
Sbjct: 656 LVEEGWTHFTSMQGD-----------------------HGLIPWREHYCRMVDVLGRAGQ 692
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
A EL E M F PD + +L +C V G + + F S Y
Sbjct: 693 LGAARELLETM---PFIPDVGAWGSLLGSCKTHSDVKLGTRAAESLLQ--FDDQSSGPYV 747
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
+ ++ G + +A+ + N ++A G++ P V +L+ + + GE + R E+
Sbjct: 748 LLANMYSSVGRVADALAVRNRMKARGVKKQPGV--SLIRVDGVLHRFVAGEASHPRHQEI 805
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIF 564
S L E+ G + D K +
Sbjct: 806 LSELSR----LQELMKKAGYQPDTKAVL 829
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 135/607 (22%), Positives = 244/607 (40%), Gaps = 110/607 (18%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N++I+ Y K +D+A +FN++PE ++F+ LMQ+
Sbjct: 51 NLIIQMYGKCSRIDDAQAVFNELPEPNVFSRCI----LMQA------------------- 87
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
Y NG + A +F +P +VVSWN +I M A+ F M
Sbjct: 88 --------YSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPRWS 139
Query: 145 VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD 204
+SW M+ G + G + A +FD+ P +V +WN +I GY DN + A+ +F +
Sbjct: 140 SSSWNSMITGYAQSGDLASATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVFDRAPG 199
Query: 205 RDLTSWKQLINGLVNSRRIDA-------------------------------AISYFKQM 233
RD SW ++ S +D+ A+ F M
Sbjct: 200 RDKISWNAMLTAYAQSGDLDSAKEVFDRTPQQDIVSCTLMIKACAVQEILGHAVEIFAAM 259
Query: 234 PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE 293
P+ +++ +I + I G + EA + + P + WT+++ Y G V A ++F+
Sbjct: 260 PDRNAVSYSFMIQIYIDQGKIGEAENLSRRMPQQDPTLWTSMLSAYSRHGLVEEARRIFD 319
Query: 294 LMTTRDVTV-WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD----- 347
RD V WN ++ + F +M P D +T+++ +
Sbjct: 320 RAARRDDEVSWNALLSAYAQAGHLHLARSTFERM----PRHDVVAWTALIAVSGQNGQLE 375
Query: 348 --------LPTLDL-------------GRQIHAQAIKIARNQFTTVSN-AMITMYARCGN 385
+P DL G+ ++ + + VS+ AMI Y++ G
Sbjct: 376 EAEVLYDLIPERDLVAWTALIQAYGVNGKLTESKRVYALMPERNRVSHTAMIIAYSQNGE 435
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+ A ++P D + S+I A +GY + A E+F+ ++ PD I ++ A
Sbjct: 436 VVQARKMLDTLPDPDQSTRTSMIVAYAQNGYIKDAREMFDSIK----NPDVIACNAMMEA 491
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
S A ++D + FD +K K + + +V + G +DEA ++ + I + V
Sbjct: 492 YSSAQMLDHAKAMFDSIKQKTLVS-----WNTMVAAYAQAGNLDEAKSIFDSIPHKNV-V 545
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
S V +N+ + E A ++ ++ + + M GR +A+ +FA
Sbjct: 546 SHNVMIVAYA-----HNMDLAE-ARRIFYSMDEKDTVTWTAMVAMVAQHGRLAEAQELFA 599
Query: 566 QMKENGV 572
+M V
Sbjct: 600 KMPYRNV 606
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 208/465 (44%), Gaps = 44/465 (9%)
Query: 66 DNVQGAK---EVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
D QG K ++ DG ++ N +I Y ID+A VF+ +P +V S +++
Sbjct: 27 DLAQGRKIHNQIADGEHRGNLFLQNLIIQMYGKCSRIDDAQAVFNELPEPNVFSRCILMQ 86
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
A + A++ F ++ + +V SW ++ G + G + A ++F +MP +WN M
Sbjct: 87 AYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWNSM 146
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN 242
I GY +G + A +F + + ++ SW LI G ++R I A F + P + +WN
Sbjct: 147 ITGYAQSGDLASATAMFDRTPEHNVISWNALITGYSDNRMIPEAKGVFDRAPGRDKISWN 206
Query: 243 SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
++++ ++G + A ++ P +I S T +I +G A+++F M R+
Sbjct: 207 AMLTAYAQSGDLDSAKEVFDRTPQQDIVSCTLMIKACAVQEILGHAVEIFAAMPDRNAVS 266
Query: 303 WNVMI-FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
++ MI + + +GE + P D +TS+L+ S ++ R+I +A
Sbjct: 267 YSFMIQIYIDQGKIGEAE-----NLSRRMPQQDPTLWTSMLSAYSRHGLVEEARRIFDRA 321
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
AR NA+++ YA+ G++ A F +P HD+++W ++I +G E+A
Sbjct: 322 ---ARRDDEVSWNALLSAYAQAGHLHLARSTFERMPRHDVVAWTALIAVSGQNGQLEEAE 378
Query: 422 ELF-------------------------ERMRLTDFKPD--DITFVGVLSACSYAGLVDQ 454
L+ E R+ P+ ++ ++ A S G V Q
Sbjct: 379 VLYDLIPERDLVAWTALIQAYGVNGKLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQ 438
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
R D + + P + T ++ + G I +A + + I+
Sbjct: 439 ARKMLDTLPD-----PDQSTRTSMIVAYAQNGYIKDAREMFDSIK 478
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 166/452 (36%), Positives = 270/452 (59%), Gaps = 19/452 (4%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD--RDLTSWKQLING 216
G +V AR+LFD+ PA+DV +WN +I GY+ +G A +LF ++ + + + + + G
Sbjct: 170 GSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIG 229
Query: 217 LVNSRRIDAAISYFKQMPETCE--------KTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
V+ + K++ E + + N+++ + ++ G ++ A S E+
Sbjct: 230 AVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKT 289
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ SWT +IVG+ +G + A +F+ M RDV WN ++ G +N G+E + F +M+E
Sbjct: 290 VVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQE 349
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF---TTVSNAMITMYARCGN 385
S P+ T ++L+ CS L L++G +H I R+Q + +++ MYA+CGN
Sbjct: 350 SKVDPNEITMVNLLSACSQLGALEMGMWVHHY---IDRHQLYLSVALGTSLVDMYAKCGN 406
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
I+ A+ F +P + ++W ++ICGLA HG+A++A+E F+RM +PD+ITF+GVLSA
Sbjct: 407 IKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSA 466
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
C +AGLV +GR +F M KY L+ + HY+C++DLLGR G +DEA L+N + D V
Sbjct: 467 CCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAV 526
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
VWGAL ACR+H NI +GE A +++EL+P++SG+Y++L MY R+ A ++
Sbjct: 527 ---VWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRV 583
Query: 566 QMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
M+ GV+K PGCS I++N H F+ D SH
Sbjct: 584 MMRHLGVEKVPGCSCIELNGVVHEFIVKDKSH 615
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 207/449 (46%), Gaps = 52/449 (11%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF---- 75
D N + + +G + A LF++ P RD+ ++NT+I G ++S + A E+F
Sbjct: 155 DVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLV 214
Query: 76 -DGMEVR-DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS----WNLVIGALVNCQR 129
DG VR D VT +SG G ++ R+ + K V N V+ V C
Sbjct: 215 EDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGS 274
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
++LA+S F+ + + V SWT M+ G R G + +AR LFD+MP +DV WN ++AGY+ N
Sbjct: 275 LELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQN 334
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI 249
A LF +M + + + E T +++S
Sbjct: 335 KQGKEAIALFHEMQESKV---------------------------DPNEITMVNLLSACS 367
Query: 250 RNGLVKEA---HSYLEKYP-YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV 305
+ G ++ H Y++++ Y ++A T+++ Y + G + AI +F+ + ++ W
Sbjct: 368 QLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTA 427
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA-QAIKI 364
MI GL + +E +++F +M + G PD TF VL+ C + GRQ + K
Sbjct: 428 MICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKY 487
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHG---YAEKA 420
+ + MI + R G++ A +++P+ D + W ++ HG EKA
Sbjct: 488 HLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHGNITLGEKA 547
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYA 449
M+L + P D + + VL A YA
Sbjct: 548 -----AMKLVELDPSD-SGIYVLLANMYA 570
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 161/387 (41%), Gaps = 70/387 (18%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE------RDMFTYNTVIAGL 62
A+ LFD+ P RD V+WN +I GY ++G A+ LF ++ E D T ++G
Sbjct: 175 ARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGC 234
Query: 63 MQSDNVQGAK---EVFDGMEVRDVVTW-NSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
Q +++ K E D VR V N+++ YV G ++ A VF + K VVSW
Sbjct: 235 AQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWT 294
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP-----A 173
+I M+ A F EM RDV W ++ G V+ + EA LF +M
Sbjct: 295 TMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDP 354
Query: 174 KDVQAWNLMIA--------------GYLDN--------------------GCVGVAEDLF 199
++ NL+ A Y+D G + A +F
Sbjct: 355 NEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIF 414
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVLIRNGL 253
+++ D++ +W +I GL N D AI YF++M P+ E T+ ++S GL
Sbjct: 415 KEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPD--EITFIGVLSACCHAGL 472
Query: 254 VKEAHSYL----EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT----RDVTVWNV 305
VKE + EKY + ++ +G G + +L+ T D VW
Sbjct: 473 VKEGRQFFSLMHEKYHLERKMKHYSCMIDL--LGRAGHLDEAEQLVNTMPMDPDAVVWGA 530
Query: 306 MIFGL---GENDLGEEGLKFFVQMKES 329
+ F G LGE+ V++ S
Sbjct: 531 LFFACRMHGNITLGEKAAMKLVELDPS 557
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 114/246 (46%), Gaps = 17/246 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ A+++F+++ + V+W MI G+ + G +++A LF++MPERD+F +N ++AG +Q+
Sbjct: 275 LELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQN 334
Query: 66 DNVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSW 117
+ A +F M+ V +T +++S G ++ + V H + V
Sbjct: 335 KQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALG 394
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
++ C + A FKE+ ++ +WT M+ GL G EA + F +M +Q
Sbjct: 395 TSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQ 454
Query: 178 AWNLMIAGYLDNGC----VGVAEDLFQKMH-----DRDLTSWKQLINGLVNSRRIDAAIS 228
+ G L C V F MH +R + + +I+ L + +D A
Sbjct: 455 PDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQ 514
Query: 229 YFKQMP 234
MP
Sbjct: 515 LVNTMP 520
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 32/237 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R +++A+ LFD+MP+RD WN ++ GY +N A+ LF++M E + +
Sbjct: 302 RLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVN 361
Query: 62 LMQSDNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
L+ + + GA E+ GM V V S++ Y G I +A+ +F +P
Sbjct: 362 LLSACSQLGALEM--GMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPD 419
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKL 167
K+ ++W +I L N D A YF+ M G + D ++ +++ G + E R+
Sbjct: 420 KNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQF 479
Query: 168 FDKMPAK-----DVQAWNLMI-----AGYLDNGCVGVAEDLFQKMH-DRDLTSWKQL 213
F M K ++ ++ MI AG+LD AE L M D D W L
Sbjct: 480 FSLMHEKYHLERKMKHYSCMIDLLGRAGHLDE-----AEQLVNTMPMDPDAVVWGAL 531
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
S PD+ TF +L C+ L G + K+ + V NA + ++ G++
Sbjct: 115 SSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVL 174
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK---PDDITFVGVLSA 445
A F P D++SWN++I G G +ALELF R+ + D K PD++T +G +S
Sbjct: 175 ARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRL-VEDGKAVRPDEVTMIGAVSG 233
Query: 446 CSYAGLVDQGRYYFDCMKNK 465
C+ G ++ G+ + + +K
Sbjct: 234 CAQMGDLELGKRLHEFVDSK 253
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 191/609 (31%), Positives = 319/609 (52%), Gaps = 83/609 (13%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A ++F+ + + + + WN MIRG+ + +++ L+ M + + L++S
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS--C 74
Query: 69 QGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
+K +G ++ D+ S+IS YV N +++A +VF
Sbjct: 75 AKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVF------------ 122
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
RDV S+T ++ G G I A+KLFD++P KDV +
Sbjct: 123 -------------------DRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVS 163
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
WN MI+GY + GC A +LF++M ++ R D E
Sbjct: 164 WNAMISGYAETGCYKEALELFEEMMKMNV--------------RPD-------------E 196
Query: 239 KTWNSIISVLIRNG---LVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFEL 294
T+ +++S +G L ++ HS+++ + + SN+ +I Y + GEV +A +F+
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
++ +DV WN +I G +L +E L F +M SG +P++ T SVL C+ L +D+G
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIG 316
Query: 355 RQIHAQAIKIAR--NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
R IH K + +++ ++I MYA+CG+I++A F+S+ + SWN++I G A
Sbjct: 317 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 376
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
HG A+ + +LF RMR +PDDITFVG+LSACS++G++D GR+ F M Y + P+
Sbjct: 377 MHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKL 436
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLN--EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
HY C++DLLG GL EA ++N E+ DG+ +W +LL AC++H N+++ E
Sbjct: 437 EHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV-----IWCSLLKACKMHGNVELAESFA 491
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVF 590
+ ++++EP N Y++L+ +Y S GR ED RI A + +KK PGCS I+++ F
Sbjct: 492 QNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEF 551
Query: 591 LSGDSSHPK 599
+ GD HP+
Sbjct: 552 VVGDKFHPQ 560
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 146/346 (42%), Gaps = 89/346 (25%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N R+++A +FD+ RD V++ +I GY G + +A LF+++P +D+ ++N +I+
Sbjct: 110 VQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMIS 169
Query: 61 GLMQSDNVQGAKEVFDGMEV--------------------------RDVVTW-------- 86
G ++ + A E+F+ M R V +W
Sbjct: 170 GYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDS 229
Query: 87 -----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
N++I Y G ++ A +F G+ KDV+SWN +IG + A F+EM
Sbjct: 230 NLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEML 289
Query: 141 ---------------------GARDVASW-------------------TIMVNGLVREGR 160
GA D+ W T +++ + G
Sbjct: 290 RSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 349
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLING 216
I A ++F+ M K + +WN MI G+ +G + DLF +M + D ++ L++
Sbjct: 350 IEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSA 409
Query: 217 LVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVKEA 257
+S +D F+ M + + T + +I +L +GL KEA
Sbjct: 410 CSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 455
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 205/701 (29%), Positives = 331/701 (47%), Gaps = 105/701 (14%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGA 71
+FD MP+RDTV+WN M+ Y G + A+ LF+ MP+ D+ ++N +++G Q Q +
Sbjct: 74 VFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQES 133
Query: 72 KEVFDGMEVR---------------------------------------DVVTWNSMISG 92
++F M R DV T ++++
Sbjct: 134 VDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDM 193
Query: 93 YVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-------------CQRMDLA------ 133
Y +D+AL F+GMP ++ VSW I V QR+ L
Sbjct: 194 YGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSY 253
Query: 134 ESYFKEMGA--------------------RDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
S F+ A D T +V+ + + +AR+ F +P
Sbjct: 254 ASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPN 313
Query: 174 KDVQAWNLMIAGY-------------LDNGCVGVAED----LFQKMHDRDLTSWKQLING 216
V+ N M+ G L AE Q++H + K +++
Sbjct: 314 HTVETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVH---CLAIKSVLDL 370
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVI 276
+ + A F+ M + +WN+II+ L +NG + + + + + V+
Sbjct: 371 YGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVV 430
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A K+ + + + V WN ++ G N E KFF +M + G PD+
Sbjct: 431 DMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHF 490
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
TF +VL C++L T++LG+QIH Q IK +S+ ++ MYA+CG++ +LL F V
Sbjct: 491 TFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKV 550
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
D +SWN++ICG A HG +AL +FERM+ + P+ TFV VL ACS+ GL D G
Sbjct: 551 EKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGC 610
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI--RADGIEVSPTVWGALL 514
YF M Y L+P+ H+ C+VD+LGR EA+ +N + +AD + +W LL
Sbjct: 611 RYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAV-----IWKTLL 665
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
C+I ++++ E+A V+ L+P++S VY++L+ +Y G+ D R +K+ +KK
Sbjct: 666 SICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKK 725
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
EPGCSWI+ H FL GD +HP+ L +LN L E++
Sbjct: 726 EPGCSWIEAQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMK 766
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 123/571 (21%), Positives = 224/571 (39%), Gaps = 83/571 (14%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N +++ Y + A +F+ MP RD ++NT++ + ++ A +FDGM DVV
Sbjct: 56 NCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVV 115
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
+WN+++SGY G+ E++ +F M + V L+ K A +
Sbjct: 116 SWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLL------------KSCSALE 163
Query: 145 VASWTIMVNGL-VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
S + V+ L V+ G + DV+ + ++ Y + A F M
Sbjct: 164 ELSLGVQVHALAVKTGLEI------------DVRTGSALVDMYGKCRSLDDALCFFYGMP 211
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQM---------PETCEKTWNSIISVLIRNGLV 254
+R+ SW I G V + + + F +M P + + G
Sbjct: 212 ERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQ 271
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
AH+ K+ + T ++ Y + + A + F + V N M+ GL
Sbjct: 272 LHAHAIKNKFSSDRVVG-TAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLF--- 327
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
M S D + + V + C++ G+Q+H AIK
Sbjct: 328 -----------MIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIK----------- 365
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG-YAEKALELFERMRLTDFK 433
+++ +Y +C + A L F + D +SWN+II L +G Y + L E +R F
Sbjct: 366 SVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFV 425
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE--- 490
T V + C G++D+ + D + + + + +L F L E
Sbjct: 426 AS--TVVDMYCKC---GIIDEAQKLHDRIGGQQVVSWNA--------ILSGFSLNKESEA 472
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTE 549
A +E+ G++ + +L C I++G +I G+ + + ++ + L +
Sbjct: 473 AQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVD 532
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
MY CG D+ +F + V+K SW
Sbjct: 533 MYAKCGDMPDSLLVFEK-----VEKRDFVSW 558
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 133/279 (47%), Gaps = 19/279 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ EA +F M Q+D+V+WN +I +NG D+ + FN+M D F +TV+ +
Sbjct: 377 LMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVDMYCKC 436
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFH---GMPLK-DVVSWNLVI 121
+ A+++ D + + VV+WN+++SG+ N + A + F M LK D ++ V+
Sbjct: 437 GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVL 496
Query: 122 GALVNCQRMDLAESYF-----KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
N ++L + +EM + S T +V+ + G + ++ +F+K+ +D
Sbjct: 497 DTCANLATIELGKQIHGQIIKQEMLDDEYISST-LVDMYAKCGDMPDSLLVFEKVEKRDF 555
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQ 232
+WN MI GY +G A +F++M ++ ++ ++ + D YF
Sbjct: 556 VSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHL 615
Query: 233 MP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
M E + + ++ +L R+ +EA ++ P+
Sbjct: 616 MTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPF 654
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 175/453 (38%), Gaps = 84/453 (18%)
Query: 31 YFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMI 90
Y K L A +F M ++D ++N +IA L Q+ + F+ M D ++++
Sbjct: 371 YGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVV 430
Query: 91 SGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM---GARD--- 144
Y G+IDEA ++ + + VVSWN ++ + + A+ +F EM G +
Sbjct: 431 DMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHF 490
Query: 145 --------VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
A+ + G G+I++ L D+ + + ++ Y G + +
Sbjct: 491 TFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYIS------STLVDMYAKCGDMPDSL 544
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
+F+K+ RD SW +I G +GL E
Sbjct: 545 LVFEKVEKRDFVSWNAMICGYA-------------------------------LHGLGVE 573
Query: 257 AHSYLEKYPYSNI----ASWTNVIVGYFEMGEVGSAIKVFELMTTR-----DVTVWNVMI 307
A E+ N+ A++ V+ +G + F LMTT + + M+
Sbjct: 574 ALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 633
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
LG + +E +KF M D + ++L+IC +++ ++ A + +
Sbjct: 634 DILGRSKGPQEAVKFINSMPFQA---DAVIWKTLLSICKIRQDVEIA-ELAASNVLLLDP 689
Query: 368 QFTTVSNAMITMYARCGNIQSA-----LLEFSSVPIHDIISWNSIICGLAYHGY------ 416
++V + +YA G LL+ + SW I HG+
Sbjct: 690 DDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSW--IEAQSEMHGFLVGDKA 747
Query: 417 AEKALELFE-------RMRLTDFKPDDITFVGV 442
++ EL+E M+L+ ++PD +FV V
Sbjct: 748 HPRSGELYEMLNDLIGEMKLSGYEPDSASFVEV 780
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 89/232 (38%), Gaps = 50/232 (21%)
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT-------VSNAMI 377
Q + +P TF+ V C+ GR+ A + VSN ++
Sbjct: 5 QQQPPPVAPARVTFSRVFQSCAQA-----GREALAAGRAAHARMVVSGFVPTAFVSNCLL 59
Query: 378 TM-------------------------------YARCGNIQSALLEFSSVPIHDIISWNS 406
M Y+ G+I +A+ F +P D++SWN+
Sbjct: 60 QMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNA 119
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNK 465
++ G G +++++LF M PD TF +L +CS + G + + +K
Sbjct: 120 LVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 179
Query: 466 YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ R+ + +VD+ G+ +D+A+ + E + WG+ + C
Sbjct: 180 LEIDVRTG--SALVDMYGKCRSLDDALCFFYGMP----ERNWVSWGSAIAGC 225
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/547 (31%), Positives = 312/547 (57%), Gaps = 21/547 (3%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV-NCQR 129
A VF+ ++ +++ WN+M G+ + AL+++ M ++ + L+ +C +
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 130 MDLAESYFKEMG-------ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
+ ++ + G D+ T +++ V+ R+ +A K+FD+ +DV ++ +
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----E 238
+ GY G + A ++F ++ +D+ SW +I+G V + A+ FK+M +T E
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195
Query: 239 KTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVGYF-EMGEVGSAIKVFEL 294
T ++IS R+G L ++ HS++ + + + N ++ ++ + GE+ +A +F
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
++ +DV WN++I G +L +E L F +M SG SP++ T S+L C+ L +D+G
Sbjct: 256 LSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIG 315
Query: 355 RQIHAQAIKIAR--NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
R IH K + +++ ++I MY++CG+I++A F+S+ + +WN++I G A
Sbjct: 316 RWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFA 375
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
HG A A ++F RMR + KPDDITFVG+LSACS+AG++D GR+ F M + Y + P+
Sbjct: 376 MHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKL 435
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
HY C++DLLG GL EA +++ + +E +W +LL AC++H N+++GE +
Sbjct: 436 EHYGCMIDLLGHSGLFKEAEEMISTMT---MEPDGVIWCSLLKACKMHGNVELGEKFAQN 492
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLS 592
+ ++EPNN G Y++L+ +Y + GR + RI + + G+KK PGCS I+I+ H F+
Sbjct: 493 LFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFII 552
Query: 593 GDSSHPK 599
GD HP+
Sbjct: 553 GDKFHPR 559
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 130/545 (23%), Positives = 241/545 (44%), Gaps = 71/545 (13%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
E D++ + ++I+ +Q++ ++ A +VFD RDVV++ ++++GY G I+ A +F
Sbjct: 95 ELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDE 154
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNGLVREGRIVEA 164
+P+KDVVSWN +I V A FKEM +V ++ +++ R G I
Sbjct: 155 IPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELG 214
Query: 165 RKLF----DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
R++ D +++ N +I Y G + A LF + +D+ SW LI G +
Sbjct: 215 RQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHL 274
Query: 221 RRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEK--YPYSNIAS 271
A+ F++M + E T SI+ G + + H Y++K +N +S
Sbjct: 275 NLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASS 334
Query: 272 W-TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
T++I Y + G++ +A +VF M + + WN MIFG + F +M+++
Sbjct: 335 LRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNE 394
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
PD+ TF +L+ CS LDLGR I +S
Sbjct: 395 IKPDDITFVGLLSACSHAGMLDLGRHI----------------------------FRSMT 426
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
+ P + + +I L + G ++A E+ M + +PD + + +L AC G
Sbjct: 427 HNYKITP--KLEHYGCMIDLLGHSGLFKEAEEMISTMTM---EPDGVIWCSLLKACKMHG 481
Query: 451 LVDQGRYYFDCMKNKYFLQPRS-AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
V+ G + +N + ++P + Y + ++ G +E + + G++ P
Sbjct: 482 NVELGEKF---AQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVP-- 536
Query: 510 WGALLGACRIHNNIKVGEIAGERVM--ELEPNNSGVYLILTEMYL---SCGRREDAKRIF 564
C ++I++ + E ++ + P N +Y +L EM + G D +
Sbjct: 537 ------GC---SSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVL 587
Query: 565 AQMKE 569
+M+E
Sbjct: 588 QEMEE 592
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 149/346 (43%), Gaps = 89/346 (25%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N R+++A +FD+ RD V++ ++ GY G++++A +F+++P +D+ ++N +I+
Sbjct: 109 VQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMIS 168
Query: 61 GLMQSDNVQGAKEVFDGMEV--------------------------RDVVTW-------- 86
G +++ N + A E+F M R V +W
Sbjct: 169 GYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGS 228
Query: 87 -----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
N++I Y G ++ A +F G+ KDV+SWN++IG + A F+EM
Sbjct: 229 NLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEML 288
Query: 141 ---------------------GARDVASW-------------------TIMVNGLVREGR 160
GA D+ W T +++ + G
Sbjct: 289 RSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGD 348
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLING 216
I A ++F+ M K + AWN MI G+ +G A D+F +M ++ ++ L++
Sbjct: 349 IEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSA 408
Query: 217 LVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVKEA 257
++ +D F+ M + T + +I +L +GL KEA
Sbjct: 409 CSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEA 454
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 208/670 (31%), Positives = 332/670 (49%), Gaps = 80/670 (11%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTY------- 55
A+ L D+MP+ + V++N++I Y + G + ++ F + D FTY
Sbjct: 65 HARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAAC 124
Query: 56 ----------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWN 87
N++++ + ++ A++VFD + RD V+WN
Sbjct: 125 SRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWN 184
Query: 88 SMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC------QRMDLAESYF---- 137
+++SGYV G D+ LRVF M + + +G+++ C MD+A +
Sbjct: 185 ALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVV 244
Query: 138 KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL-DNGCVGVAE 196
K DV + MV ++G + EA LF + +V +N MIAG D VG
Sbjct: 245 KAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGT-- 302
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV-- 254
D+ ++ L+ + + V SR + E E T++S+I G +
Sbjct: 303 DVLREA----LSLYSE-----VQSRGM-----------EPTEFTFSSVIRACNLAGDIEF 342
Query: 255 -KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
K+ H + K+ + + ++ Y G + + F + +DV W MI G +
Sbjct: 343 GKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQ 402
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N+L E L F ++ +G PD T +SV+ C+ L G QI A K +FT +
Sbjct: 403 NELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAM 462
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
N+ I MYAR G++ +A+ F + HDI+SW+++I A HG A AL F M
Sbjct: 463 GNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKV 522
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
P++ITF+GVL+ACS+ GLVD+G Y++ MK +Y L P H TCVVDLLGR G + +A
Sbjct: 523 VPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAE 582
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
IR P +W +LL +CRIH +++ G++ +R+MEL+P++S Y+ L +YL
Sbjct: 583 AF---IRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYL 639
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
G A +I MKE GVKKEPG SWI++ G H F++GD SHP+ + + L + +
Sbjct: 640 DAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLS 699
Query: 613 EIEREILFDA 622
+I++ DA
Sbjct: 700 KIDKLTATDA 709
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 154/365 (42%), Gaps = 47/365 (12%)
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
R+ AH + +P ++ ++ Y +G G A ++ + M + +N++I
Sbjct: 31 RHAAAVHAH-IVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLIDA 87
Query: 310 LGENDLGEEGLKFFVQMKES-GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI--KIAR 366
E L+ F + + S G D T+ + L CS L G+ +HA ++ IA
Sbjct: 88 YSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAG 147
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
F VSN++++MYARCG++ A F + D +SWN+++ G G + L +F
Sbjct: 148 GVF--VSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAM 205
Query: 427 MRLTDFKPDDITFVGVLSACSYAG--LVDQGRYYFDCMKNKYF----------------- 467
MR + + V+ C+ + ++D C+ F
Sbjct: 206 MRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKK 265
Query: 468 -------------LQPRSAHYTCVVDLLGR------FGLIDEAMNLLNEIRADGIEVSPT 508
L P + ++ L R ++ EA++L +E+++ G+E +
Sbjct: 266 GALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEF 325
Query: 509 VWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ +++ AC + +I+ G +I G+ + + + L ++YL+ G ED R F +
Sbjct: 326 TFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSV 385
Query: 568 KENGV 572
+ V
Sbjct: 386 PKQDV 390
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/447 (20%), Positives = 173/447 (38%), Gaps = 103/447 (23%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN------GFLDNAMCLFNQMPERDM--- 52
+ + EA LF + + V +N MI G ++ L A+ L++++ R M
Sbjct: 264 KKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPT 323
Query: 53 -FTYNTVIAGLMQSDNVQGAKEV-----------------------------------FD 76
FT+++VI + +++ K++ F
Sbjct: 324 EFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFT 383
Query: 77 GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDLAES 135
+ +DVVTW +MISG V N L + AL +FH + + I +++N C + +A +
Sbjct: 384 SVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVART 443
Query: 136 -------YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD 188
K R A ++ R G + A + F +M + D+ +W+ +I+ +
Sbjct: 444 GEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQ 503
Query: 189 NGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMPETCE-----K 239
+GC A F +M D + ++ ++ + +D + Y++ M E K
Sbjct: 504 HGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIK 563
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPY--------------------------------- 266
++ +L R G + +A +++ +
Sbjct: 564 HCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMEL 623
Query: 267 --SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
S+ AS+ N+ Y + GE+ A K+ ++M R V GL +L G+ FV
Sbjct: 624 QPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEP----GLSWIEL-RSGVHSFV 678
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTL 351
+S P NA ++ + + S + L
Sbjct: 679 AGDKSHPE-SNAIYSKLAEMLSKIDKL 704
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 198/636 (31%), Positives = 331/636 (52%), Gaps = 28/636 (4%)
Query: 7 QEAQNLFDKMPQR-DTVTWNVMIRGYFKNGFLDNAMCLFNQM---P--ERDMFTYNTVIA 60
Q A+ +F + D WN ++ KN + +F+++ P + D FTY +V+
Sbjct: 247 QSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLK 306
Query: 61 GLMQSDNVQGAK----EVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
V K V DVV +S + Y + ++A+++F MP +DV S
Sbjct: 307 ACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVAS 366
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLFDKMP 172
WN VI + + A F+EM D + T +++ R + +++ ++
Sbjct: 367 WNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELV 426
Query: 173 ----AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
A D + ++ Y GC+ +A+++F+++ +++ SW +I G + I
Sbjct: 427 RSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIE 486
Query: 229 YFKQMPET-CEKTWNSIISVLIRNG------LVKEAHSYLEKYPY-SNIASWTNVIVGYF 280
F++M E T ++ S+L+ L K H Y+ + ++I +++I YF
Sbjct: 487 LFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYF 546
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G +GSA VF+ M +V WNVMI G + E L F M+++G PD TFTS
Sbjct: 547 KCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTS 606
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
VL CS L L+ G++IH I+ V A++ MYA+CG + AL F+ +P D
Sbjct: 607 VLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERD 666
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+SW S+I HG A +AL+LFE+M+ +D KPD +TF+ +LSACS+AGLVD+G YYF+
Sbjct: 667 FVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFN 726
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
M +Y +P HY+C++DLLGR G + EA +L R I + L AC +H
Sbjct: 727 QMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQ--RTPDIREDVGLLSTLFSACHLH 784
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
+ +GE G ++E +P++ Y+IL+ MY S + ++ +++ ++KE G+KK PGCSW
Sbjct: 785 KKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSW 844
Query: 581 IQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
I++ H F+ D SHP+ + +++L + +E+
Sbjct: 845 IEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEK 880
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 143/325 (44%), Gaps = 74/325 (22%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------------- 50
++ A+ +F+++ +++ V+WN MI GY G + + LF +M E
Sbjct: 450 LEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMA 509
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
D+F +++I + N+ A+ VF M +VV+W
Sbjct: 510 CSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSW 569
Query: 87 NSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
N MISGYV G EAL +F M D +++ V+ A C ++ + E
Sbjct: 570 NVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPA---CSQLAVLEK------G 620
Query: 143 RDVASWTI-------------MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
+++ ++ I +++ + G + EA +F+++P +D +W MIA Y +
Sbjct: 621 KEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSH 680
Query: 190 GCVGVAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKT 240
G A LF+KM D ++ +++ ++ +D YF QM + +
Sbjct: 681 GQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEH 740
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYP 265
++ +I +L R G ++EA+ L++ P
Sbjct: 741 YSCLIDLLGRVGRLREAYEILQRTP 765
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 35/254 (13%)
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV--PIHDIISWNSIICG 410
LG+ IH + + + T+ ++I +Y C QSA L F ++ P+ DI WN ++
Sbjct: 213 LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL-DITLWNGLMAA 271
Query: 411 LAYHGYAEKALELFER-MRLTDFKPDDITFVGVLSACSYAGLVDQGR------------- 456
+ + LE+F R + KPD T+ VL ACS G V G+
Sbjct: 272 CTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAM 331
Query: 457 ----------------YYFDCMKNKYFLQPRS-AHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+ D +K + R A + V+ + G ++A+ L E++
Sbjct: 332 DVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMK 391
Query: 500 ADGIEVSPTVWGALLGAC-RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
G + ++ +C R+ + + EI E V + V L +MY CG E
Sbjct: 392 VSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLE 451
Query: 559 DAKRIFAQMKENGV 572
AK +F Q++ V
Sbjct: 452 MAKEVFEQIQRKNV 465
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 191/639 (29%), Positives = 327/639 (51%), Gaps = 56/639 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFK---------NGFLDNAMCLFNQM-PERD 51
+ R++EA + + M + T ++ + RG + G +A L + + P R
Sbjct: 73 KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNR- 131
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+ NT+++ + ++ A+ VFDG+ R++V+W +MI +V EA + + M L
Sbjct: 132 -YLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKL 190
Query: 112 ----KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
D V++ ++ A N + + + + E I GL E R+ +
Sbjct: 191 AGCKPDKVTFVSLLNAFTNPELLQVGQKVHME----------IAKAGLELEPRVGTS--- 237
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
++ Y G + A+ +F K+ ++++ +W LI G ++D A+
Sbjct: 238 --------------LVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVAL 283
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLV--------KEAHSYLEKYPYSNIASWTNVIVG- 278
++M + E N I I G K+ H Y+ + Y N ++
Sbjct: 284 ELLEKMQQA-EVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITM 342
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G + A K+F + RDV W M+ G + +E + F +M++ G PD TF
Sbjct: 343 YCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTF 402
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
TS LT CS L G+ IH Q + + + +A+++MYA+CG++ A L F+ +
Sbjct: 403 TSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSE 462
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
++++W ++I G A HG +ALE FE+M+ KPD +TF VLSAC++ GLV++GR +
Sbjct: 463 RNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKH 522
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F M Y ++P HY+C VDLLGR G ++EA N++ + + P+VWGALL ACR
Sbjct: 523 FRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTM---PFQPGPSVWGALLSACR 579
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
IH++++ GE A E V++L+P++ G Y+ L+ +Y + GR EDA+++ M++ V KEPG
Sbjct: 580 IHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQ 639
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
SWI+++ HVF D SHP+ + L L +I+ +
Sbjct: 640 SWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQ 678
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--L 536
V +L + G + EA+ +LN + G V V+ LL C +++ G +++ +
Sbjct: 68 VSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 127
Query: 537 EPNNSGVYL--ILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
+PN YL L MY CG DA+R+F +G++ SW + + F++G+
Sbjct: 128 QPNR---YLENTLLSMYAKCGSLTDARRVF-----DGIRDRNIVSWTAMIEA---FVAGN 176
Query: 595 SS 596
+
Sbjct: 177 QN 178
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 189/615 (30%), Positives = 314/615 (51%), Gaps = 42/615 (6%)
Query: 16 MPQRDTVTWNVMIRGYFKNGFLDNAMCL-FNQMPE-----------RDMFTYNTVIAGLM 63
+P R TW V R F+ D C FN + E D++ +I+
Sbjct: 9 LPTR-APTW-VSTRRLFEEKLQDLHKCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFS 66
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
+ A VF+ ++ +V +N++I +V N +A F M + + N
Sbjct: 67 LCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPF 126
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
L+ A + W V + VE F D+ N +I
Sbjct: 127 LLK---------------ACNGKGWLPTVQMIHCH---VEKYGFFG-----DLFVPNSLI 163
Query: 184 AGYLDNGCVGV--AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
Y G +GV A LF +M ++DL SW +I GLV + + A F +M E +W
Sbjct: 164 DSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSW 223
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N+I+ ++ G + +A + EK P N+ SW+ ++ GY + G++ A +F+ M +++
Sbjct: 224 NTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLV 283
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
W ++I G E L +E + QM+ +G PD+ T S+L C++ L LG+++HA
Sbjct: 284 TWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASI 343
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
KI VSNA++ MYA+CG + AL F+ + + D++SWN ++ GLA HG+ EKA+
Sbjct: 344 KKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAI 403
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
+LF +M+ FKPD +T + +L AC++AG VDQG YF+ M+ + + P HY C++DL
Sbjct: 404 QLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDL 463
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LGR G ++EA L+ + +E + +WG LLGACR+HN + + E +R++ LE ++
Sbjct: 464 LGRGGRLEEAFRLVQSMP---MEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDP 520
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFH 601
G Y +L+ ++ + G + QMK GV+K G S I+++D H F D SHP+
Sbjct: 521 GNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTVFDKSHPETD 580
Query: 602 RLRYLLNLLHTEIER 616
++ +L L ++++
Sbjct: 581 KIYQILVKLGQDLKQ 595
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 215/441 (48%), Gaps = 24/441 (5%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A N+F+++ + +N +IR + +N A F M + +F N L+++ N
Sbjct: 74 AVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNG 133
Query: 69 QGAKEVFDGMEVR--------DVVTWNSMISGYVCNGL--IDEALRVFHGMPLKDVVSWN 118
+G + D+ NS+I Y GL ++ A+++F M KD+VSWN
Sbjct: 134 KGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWN 193
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+IG LV + A F EM RD SW +++G V+ G + +A LF+KMP ++V +
Sbjct: 194 SMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVS 253
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
W+ M++GY G + +A LF KM ++L +W +I+G A + + QM
Sbjct: 254 WSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGL 313
Query: 239 K----TWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIK 290
K T SI++ +GL+ K+ H+ ++K + +N +V Y + G V A+
Sbjct: 314 KPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALS 373
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+F M+ RD+ WN M+ GL + GE+ ++ F +M++ G PD T ++L C+
Sbjct: 374 IFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGF 433
Query: 351 LDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPI--HDIISWNS 406
+D G + +++ + + MI + R G ++ A S+P+ +D+I W +
Sbjct: 434 VDQGLS-YFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVI-WGT 491
Query: 407 IICGLAYHGYAEKALELFERM 427
++ H A ++ +R+
Sbjct: 492 LLGACRVHNAVPLAEKVLDRL 512
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 131/268 (48%), Gaps = 12/268 (4%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ A LF +M ++D V+WN MI G K G L A LF++M ERD ++NT++ G +++
Sbjct: 174 VNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKA 233
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
+ A +F+ M R+VV+W++M+SGY G ++ A +F MP K++V+W ++I
Sbjct: 234 GEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFA 293
Query: 126 NCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKL---FDKMPAK-DVQ 177
A + + +M A D + ++ G +V +K+ K+ K V
Sbjct: 294 EKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVN 353
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
N ++ Y G V A +F +M RDL SW ++ GL + AI F +M +
Sbjct: 354 VSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEG 413
Query: 238 EK----TWNSIISVLIRNGLVKEAHSYL 261
K T +I+ G V + SY
Sbjct: 414 FKPDKVTLIAILCACTHAGFVDQGLSYF 441
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 136/287 (47%), Gaps = 30/287 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ + +A NLF+KMP+R+ V+W+ M+ GY K G ++ A LF++MP +++ T+ +I+
Sbjct: 231 VKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIIS 290
Query: 61 GLMQSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
G + + A +++ ME D T S+++ +GL+ +V + +
Sbjct: 291 GFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKC 350
Query: 117 WNLVIGALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
V ALV+ C R+D A S F EM RD+ SW M+ GL G +A +LF KM
Sbjct: 351 SVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQ 410
Query: 173 AKDVQAWNLMI---------AGYLDNGCVGVAEDLFQKMHDRD------LTSWKQLINGL 217
+ + + + AG++D G F M +RD + + +I+ L
Sbjct: 411 QEGFKPDKVTLIAILCACTHAGFVDQGL-----SYFNSM-ERDHGIVPHIEHYGCMIDLL 464
Query: 218 VNSRRIDAAISYFKQMP-ETCEKTWNSIISVLIRNGLVKEAHSYLEK 263
R++ A + MP E + W +++ + V A L++
Sbjct: 465 GRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDR 511
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 209/659 (31%), Positives = 320/659 (48%), Gaps = 74/659 (11%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTY--------- 55
A+ LFD+MP+R+ V+WN +I GY + GF M LF + D+ FT+
Sbjct: 73 AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR 132
Query: 56 --------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
N++I + + A+ VF+ + D V+WNS+
Sbjct: 133 TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192
Query: 90 ISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLV------IGALVNCQRMDLAESYFK 138
I+GYV G DE LR+ HG+ L + + + + C +M L K
Sbjct: 193 IAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKM-LHGCAVK 251
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
DV T +++ + G + +A K+F MP +V +N MIAG+L
Sbjct: 252 LGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ---------- 301
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
+ M D + + + + SR + + F + + C S + K+ H
Sbjct: 302 METMAD-EFANEAMYLFFEMQSRGMKPSEFTFSSILKAC--------STIEAFECGKQIH 352
Query: 259 SYLEKYPYSNIASWTNVIVGYFEM-GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ + KY + N +V + + G + +K F DV W +I G +N E
Sbjct: 353 AQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFE 412
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
GL F ++ SG PD T + +L+ C++L + G QIHA AIK FT + N+ I
Sbjct: 413 GGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQI 472
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
MYA+CG+I SA + F DI+SW+ +I A HG A++A++LFE M+ + P+ I
Sbjct: 473 CMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHI 532
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
TF+GVL ACS+ GLV++G YF+ MK + + P H C+VDLLGR G + EA +
Sbjct: 533 TFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESF--- 589
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
I G E P +W +LL ACR+H G+ ERV+ELEP + Y++L +Y G +
Sbjct: 590 IMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQ 649
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
A I MK+ GVKKEPG SWI++ + H F++GD SHP + L + EI++
Sbjct: 650 MPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKK 708
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 210/455 (46%), Gaps = 42/455 (9%)
Query: 20 DTVTWNVMIRGYFKNGFLDNA----MCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF 75
D+VT+ +++ + G L + M + + +F N ++ + AK++F
Sbjct: 18 DSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLF 77
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG-ALVNCQR---MD 131
D M R+VV+WNS+ISGY G E + +F + D+ AL C R +
Sbjct: 78 DRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLR 137
Query: 132 LAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
L + + ++ N L+ + GRI AR +F+ D +WN +IAGY+
Sbjct: 138 LGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYV 197
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGL-VNSRRIDAAISYFKQMPETCEKTWNSIIS 246
+G +++ + + K L +GL +NS + +A+ + C ++S I
Sbjct: 198 R---IGSNDEMLRLL-------VKMLRHGLNLNSYALGSAL-------KACGSNFSSSIE 240
Query: 247 VLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV 305
K H K ++ T ++ Y ++G++ A K+F+LM +V ++N
Sbjct: 241 C------GKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNA 294
Query: 306 MIFGLGE-----NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
MI G + ++ E + F +M+ G P TF+S+L CS + + G+QIHAQ
Sbjct: 295 MIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQ 354
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
K + NA++ +Y+ G+I+ L F S P D++SW S+I G +G E
Sbjct: 355 IFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGG 414
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
L LF + + KPD+ T +LSAC+ V G
Sbjct: 415 LTLFHELLFSGRKPDEFTISIMLSACANLAAVKSG 449
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 127/585 (21%), Positives = 244/585 (41%), Gaps = 85/585 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ RI A+ +F+ + D+V+WN +I GY + G D + L +M + + +
Sbjct: 167 KCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGS 226
Query: 62 LMQ------SDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMP 110
++ S +++ K + G V+ DVV +++ Y G +++A ++F MP
Sbjct: 227 ALKACGSNFSSSIECGK-MLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP 285
Query: 111 LKDVVSWNLVIGALVNCQRM-----DLAESYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
+VV +N +I + + M + A F EM +R + + +++ +EA
Sbjct: 286 DPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAF 345
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCV------GVAEDLFQKMHDR---DLTSWKQLING 216
+ ++ A+ + +NL ++ N V G ED + H D+ SW LI G
Sbjct: 346 ECGKQIHAQ-IFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVG 404
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISVL---------IRNGLVKEAHSYLEKYPYS 267
V + + + ++ F ++ + K IS++ +++G ++ H+Y K
Sbjct: 405 HVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSG--EQIHAYAIKTGIG 462
Query: 268 NIASWTNV-IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
N N I Y + G++ SA F+ D+ W+VMI ++ +E + F M
Sbjct: 463 NFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELM 522
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
K SG +P++ TF VL CS ++ G + +I + N
Sbjct: 523 KGSGIAPNHITFLGVLVACSHGGLVEEGLRY----FEIMKKDHGITPNVK---------- 568
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
S I D++ G A + E + + F+ D + + +LSAC
Sbjct: 569 -------HSACIVDLL------------GRAGRLAEAESFIMDSGFEGDPVMWRSLLSAC 609
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPR-SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
D G+ + + L+P +A Y + ++ G+ A + N ++ G++
Sbjct: 610 RVHKATDTGKRVAERVIE---LEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKK 666
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
P + +G N+ +AG+R PN+ +Y+ L EM
Sbjct: 667 EPGLSWIEVG------NVVHSFVAGDRS---HPNSQVIYVQLEEM 702
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 148/368 (40%), Gaps = 44/368 (11%)
Query: 240 TWNSIISVLIRNGLV---KEAHSYLEKYPYSN-IASWTNVIVGYFEMGEVGSAIKVFELM 295
T+ ++ R G + K AH ++ K + + N++ Y + GE A K+F+ M
Sbjct: 21 TYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRM 80
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
R+V WN +I G + E + F + + S D TF++ L++C L LGR
Sbjct: 81 PKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGR 140
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
IHA ++N++I MY +CG I A L F S D +SWNS+I G G
Sbjct: 141 LIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIG 200
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSAC--SYAGLVDQGRYYFDCMKNKYFLQPRSA 473
++ L L +M + L AC +++ ++ G+ C K L
Sbjct: 201 SNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAV-KLGLDLDVV 259
Query: 474 HYTCVVDLLGRFG------------------------------------LIDEAMNLLNE 497
T ++D + G +EAM L E
Sbjct: 260 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 319
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGR 556
+++ G++ S + ++L AC + G+ ++ + ++ + L E+Y G
Sbjct: 320 MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGS 379
Query: 557 REDAKRIF 564
ED + F
Sbjct: 380 IEDGLKCF 387
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 198/636 (31%), Positives = 331/636 (52%), Gaps = 28/636 (4%)
Query: 7 QEAQNLFDKMPQR-DTVTWNVMIRGYFKNGFLDNAMCLFNQM---P--ERDMFTYNTVIA 60
Q A+ +F + D WN ++ KN + +F+++ P + D FTY +V+
Sbjct: 55 QSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLK 114
Query: 61 GLMQSDNVQGAK----EVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
V K V DVV +S + Y + ++A+++F MP +DV S
Sbjct: 115 ACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVAS 174
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLFDKMP 172
WN VI + + A F+EM D + T +++ R + +++ ++
Sbjct: 175 WNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELV 234
Query: 173 ----AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
A D + ++ Y GC+ +A+++F+++ +++ SW +I G + I
Sbjct: 235 RSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIE 294
Query: 229 YFKQMPET-CEKTWNSIISVLIRNG------LVKEAHSYLEKYPY-SNIASWTNVIVGYF 280
F++M E T ++ S+L+ L K H Y+ + ++I +++I YF
Sbjct: 295 LFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYF 354
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G +GSA VF+ M +V WNVMI G + E L F M+++G PD TFTS
Sbjct: 355 KCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTS 414
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
VL CS L L+ G++IH I+ V A++ MYA+CG + AL F+ +P D
Sbjct: 415 VLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERD 474
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+SW S+I HG A +AL+LFE+M+ +D KPD +TF+ +LSACS+AGLVD+G YYF+
Sbjct: 475 FVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFN 534
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
M +Y +P HY+C++DLLGR G + EA +L R I + L AC +H
Sbjct: 535 QMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQ--RTPDIREDVGLLSTLFSACHLH 592
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
+ +GE G ++E +P++ Y+IL+ MY S + ++ +++ ++KE G+KK PGCSW
Sbjct: 593 KKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSW 652
Query: 581 IQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
I++ H F+ D SHP+ + +++L + +E+
Sbjct: 653 IEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEK 688
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 143/325 (44%), Gaps = 74/325 (22%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------------- 50
++ A+ +F+++ +++ V+WN MI GY G + + LF +M E
Sbjct: 258 LEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMA 317
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
D+F +++I + N+ A+ VF M +VV+W
Sbjct: 318 CSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSW 377
Query: 87 NSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
N MISGYV G EAL +F M D +++ V+ A C ++ + E
Sbjct: 378 NVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPA---CSQLAVLEK------G 428
Query: 143 RDVASWTI-------------MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
+++ ++ I +++ + G + EA +F+++P +D +W MIA Y +
Sbjct: 429 KEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSH 488
Query: 190 GCVGVAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKT 240
G A LF+KM D ++ +++ ++ +D YF QM + +
Sbjct: 489 GQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEH 548
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYP 265
++ +I +L R G ++EA+ L++ P
Sbjct: 549 YSCLIDLLGRVGRLREAYEILQRTP 573
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 35/273 (12%)
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D S+L C D L G+ IH + + + T+ ++I +Y C QSA L F
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 394 SSV--PIHDIISWNSIICGLAYHGYAEKALELFER-MRLTDFKPDDITFVGVLSACSYAG 450
++ P+ DI WN ++ + + LE+F R + KPD T+ VL ACS G
Sbjct: 62 QTIENPL-DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120
Query: 451 LVDQGR-----------------------------YYFDCMKNKYFLQPRS-AHYTCVVD 480
V G+ + D +K + R A + V+
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC-RIHNNIKVGEIAGERVMELEPN 539
+ G ++A+ L E++ G + ++ +C R+ + + EI E V
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFAL 240
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ V L +MY CG E AK +F Q++ V
Sbjct: 241 DGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNV 273
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 198/643 (30%), Positives = 329/643 (51%), Gaps = 35/643 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
+ I+ A +F MP+++ VTWNV++ GY + G + + LF M E D+ FT T
Sbjct: 260 KCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTT 319
Query: 58 VIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V+ G S N++ + + G E + + ++ Y GL +A+ VF +
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC-GLVDMYSKCGLAIDAIGVFKTIKKP 378
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA--SWTIMV-------NGLVREGRIVE 163
D+V W+ +I L + + + F M D +TI G ++ G+ +
Sbjct: 379 DIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIH 438
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
A ++ DV N ++ Y+ NGCV L++ M DRDL SW ++GL +
Sbjct: 439 A-CVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMY 497
Query: 224 DAAISYFKQMPETC----EKTWNSII---SVLIRNGLVKEAHSYLEKYPYS-NIASWTNV 275
D ++ F M E T+ SI+ S L ++ H+++ K N T +
Sbjct: 498 DRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTAL 557
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
I Y + + A F ++ RD+ W V+I + + GE+ L +F QM++ G P+
Sbjct: 558 IDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNE 617
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
T L+ CS L +L+ G+Q+H+ K V +A++ MYA+CG ++ A F +
Sbjct: 618 FTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEA 677
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+ D I+WN+IICG A +G KAL F M PD +TF G+LSACS+ GLV++G
Sbjct: 678 LIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEG 737
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
+ +F+ M + + P H C+VD+LGR G DE + + +++ + + +W +LG
Sbjct: 738 KEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQ---LSQNALIWETVLG 794
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
A ++HNN+ +GE A ++ EL+P Y++L+ ++ + GR +D KR+ + M GVKKE
Sbjct: 795 ASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKE 854
Query: 576 PGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREI 618
PGCSW++ N H F+S D SHP+ + L+ E++RE+
Sbjct: 855 PGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLD----ELDREL 893
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 139/558 (24%), Positives = 237/558 (42%), Gaps = 77/558 (13%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF---- 75
D+ W ++ Y K + A + +MP+RD+ ++ +I GL+ + +F
Sbjct: 146 DSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQ 205
Query: 76 -DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG-ALVN----CQR 129
+G+ + + + +C L + + H K + +L +G ALV+ C
Sbjct: 206 NEGIMPNEFTLATGLKACSLCMAL--DLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI------ 183
++LA F M ++ +W +++NG + G + KLF M DV+ +
Sbjct: 264 IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKG 323
Query: 184 -------------------AGYLDN---GC--------VGVAED---LFQKMHDRDLTSW 210
GY N GC G+A D +F+ + D+ W
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVW 383
Query: 211 KQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVLIRNGLV---KEAHSYL 261
LI L + + +I F M P + T S++S G + + H+ +
Sbjct: 384 SALITCLDQQGQSEESIKLFHLMRLGDTLPN--QYTICSLLSAATNTGNLQYGQSIHACV 441
Query: 262 EKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
KY + + +N +V Y + G V K++E M RD+ WN + GL + + + L
Sbjct: 442 WKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPL 501
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F M E G P+ TF S+L CS L + GRQ+HA IK + V A+I MY
Sbjct: 502 TIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMY 561
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
A+C ++ A + F+ + + D+ +W II A EKAL F +M+ KP++ T
Sbjct: 562 AKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLA 621
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY------TCVVDLLGRFGLIDEAMNL 494
G LS CS ++ G + + + +S H + +VD+ + G ++EA L
Sbjct: 622 GCLSGCSSLASLEGG-------QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEAL 674
Query: 495 LNE-IRADGIEVSPTVWG 511
IR D I + + G
Sbjct: 675 FEALIRRDTIAWNTIICG 692
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 127/549 (23%), Positives = 224/549 (40%), Gaps = 87/549 (15%)
Query: 104 RVFHGMPLKDVVS-----WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE 158
+ HG+ +KDV++ W ++ C+ A +M RDV SWT ++ GLV E
Sbjct: 132 KAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAE 191
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR--------DLTSW 210
G ++ LF +M + + +A L + +A DL ++MH + DL
Sbjct: 192 GFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVG 251
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR----NGLVKEAHSYLEKYPY 266
L++ I+ A F MPE + TWN +++ + G++K S +E
Sbjct: 252 SALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVK 311
Query: 267 SNIASWTNVIVG-----------------------------------YFEMGEVGSAIKV 291
N + T V+ G Y + G AI V
Sbjct: 312 CNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGV 371
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F+ + D+ VW+ +I L + EE +K F M+ P+ T S+L+ ++ L
Sbjct: 372 FKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNL 431
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
G+ IHA K VSNA++TMY + G + + S+ D+ISWN+ + GL
Sbjct: 432 QYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGL 491
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-YYFDCMKNKYFLQP 470
G ++ L +F M F P+ TF+ +L +CS V GR + +KN+ L
Sbjct: 492 HDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQ--LDD 549
Query: 471 RSAHYTCVVDLLGRFGLIDE-------------------------------AMNLLNEIR 499
+ T ++D+ + +++ A+N +++
Sbjct: 550 NNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQ 609
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL-EPNNSGVYLILTEMYLSCGRRE 558
+G++ + L C +++ G+ V + ++ V L +MY CG E
Sbjct: 610 QEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCME 669
Query: 559 DAKRIFAQM 567
+A+ +F +
Sbjct: 670 EAEALFEAL 678
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 16/290 (5%)
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVG 286
+ Y+ M C + ++ I +VK+ + P S++ W +++ Y +
Sbjct: 112 LKYYSSMLRECASKRSLGVAKAIHGLIVKDVIN-----PDSHL--WVSLVNVYAKCRYSA 164
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A V M RDV W +I GL + + F +M+ G P+ T + L CS
Sbjct: 165 YARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACS 224
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
LDLG+Q+HAQA K+ V +A++ +YA+CG I+ A F +P + ++WN
Sbjct: 225 LCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNV 284
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD-CMKNK 465
++ G A G L+LF M D K ++ T VL C+ + + QG+ +K
Sbjct: 285 LLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCG 344
Query: 466 YFLQPRSAHYTC-VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
Y + C +VD+ + GL +A+ + I+ I VW AL+
Sbjct: 345 Y---EGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDI----VVWSALI 387
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 123/289 (42%), Gaps = 36/289 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
M+N + + L++ M RD ++WN + G G D + +F M E +M+T+
Sbjct: 461 MKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFI 520
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM-ISGYVCNGLID---------EALRVF 106
+++ + +V G +V + N + + +VC LID +A F
Sbjct: 521 SILG------SCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAF 574
Query: 107 HGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR--------E 158
+ + ++D+ +W ++I + + A +YF++M V + G + E
Sbjct: 575 NRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLE 634
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G +F D+ + ++ Y GC+ AE LF+ + RD +W +I G
Sbjct: 635 GGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYA 694
Query: 219 NSRRIDAAISYFKQM------PETCEKTWNSIISVLIRNGLVKEAHSYL 261
+ + + A++ F+ M P+ T+ I+S GLV+E +
Sbjct: 695 QNGQGNKALTAFRMMLDEGISPDGV--TFTGILSACSHQGLVEEGKEHF 741
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 198/643 (30%), Positives = 329/643 (51%), Gaps = 35/643 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
+ I+ A +F MP+++ VTWNV++ GY + G + + LF M E D+ FT T
Sbjct: 260 KCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTT 319
Query: 58 VIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V+ G S N++ + + G E + + ++ Y GL +A+ VF +
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG-LVDMYSKCGLAIDAIGVFKTIKKP 378
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA--SWTIMV-------NGLVREGRIVE 163
D+V W+ +I L + + + F M D +TI G ++ G+ +
Sbjct: 379 DIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIH 438
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
A ++ DV N ++ Y+ NGCV L++ M DRDL SW ++GL +
Sbjct: 439 A-CVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMY 497
Query: 224 DAAISYFKQMPETC----EKTWNSII---SVLIRNGLVKEAHSYLEKYPYS-NIASWTNV 275
D ++ F M E T+ SI+ S L ++ H+++ K N T +
Sbjct: 498 DRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTAL 557
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
I Y + + A F ++ RD+ W V+I + + GE+ L +F QM++ G P+
Sbjct: 558 IDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNE 617
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
T L+ CS L +L+ G+Q+H+ K V +A++ MYA+CG ++ A F +
Sbjct: 618 FTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEA 677
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+ D I+WN+IICG A +G KAL F M PD +TF G+LSACS+ GLV++G
Sbjct: 678 LIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEG 737
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
+ +F+ M + + P H C+VD+LGR G DE + + +++ + + +W +LG
Sbjct: 738 KEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQ---LSQNALIWETVLG 794
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
A ++HNN+ +GE A ++ EL+P Y++L+ ++ + GR +D KR+ + M GVKKE
Sbjct: 795 ASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKE 854
Query: 576 PGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREI 618
PGCSW++ N H F+S D SHP+ + L+ E++RE+
Sbjct: 855 PGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLD----ELDREL 893
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 139/558 (24%), Positives = 237/558 (42%), Gaps = 77/558 (13%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF---- 75
D+ W ++ Y K + A + +MP+RD+ ++ +I GL+ + +F
Sbjct: 146 DSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQ 205
Query: 76 -DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG-ALVN----CQR 129
+G+ + + + +C L + + H K + +L +G ALV+ C
Sbjct: 206 NEGIMPNEFTLATGLKACSLCMAL--DLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI------ 183
++LA F M ++ +W +++NG + G + KLF M DV+ +
Sbjct: 264 IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKG 323
Query: 184 -------------------AGYLDN---GC--------VGVAED---LFQKMHDRDLTSW 210
GY N GC G+A D +F+ + D+ W
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVW 383
Query: 211 KQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVLIRNGLV---KEAHSYL 261
LI L + + +I F M P + T S++S G + + H+ +
Sbjct: 384 SALITCLDQQGQSEESIKLFHLMRLGDTLPN--QYTICSLLSAATNTGNLQYGQSIHACV 441
Query: 262 EKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
KY + + +N +V Y + G V K++E M RD+ WN + GL + + + L
Sbjct: 442 WKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPL 501
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F M E G P+ TF S+L CS L + GRQ+HA IK + V A+I MY
Sbjct: 502 TIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMY 561
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
A+C ++ A + F+ + + D+ +W II A EKAL F +M+ KP++ T
Sbjct: 562 AKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLA 621
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY------TCVVDLLGRFGLIDEAMNL 494
G LS CS ++ G + + + +S H + +VD+ + G ++EA L
Sbjct: 622 GCLSGCSSLASLEGG-------QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEAL 674
Query: 495 LNE-IRADGIEVSPTVWG 511
IR D I + + G
Sbjct: 675 FEALIRRDTIAWNTIICG 692
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 127/549 (23%), Positives = 224/549 (40%), Gaps = 87/549 (15%)
Query: 104 RVFHGMPLKDVVS-----WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE 158
+ HG+ +KDV++ W ++ C+ A +M RDV SWT ++ GLV E
Sbjct: 132 KAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAE 191
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR--------DLTSW 210
G ++ LF +M + + +A L + +A DL ++MH + DL
Sbjct: 192 GFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVG 251
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR----NGLVKEAHSYLEKYPY 266
L++ I+ A F MPE + TWN +++ + G++K S +E
Sbjct: 252 SALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVK 311
Query: 267 SNIASWTNVIVG-----------------------------------YFEMGEVGSAIKV 291
N + T V+ G Y + G AI V
Sbjct: 312 CNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGV 371
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F+ + D+ VW+ +I L + EE +K F M+ P+ T S+L+ ++ L
Sbjct: 372 FKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNL 431
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
G+ IHA K VSNA++TMY + G + + S+ D+ISWN+ + GL
Sbjct: 432 QYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGL 491
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-YYFDCMKNKYFLQP 470
G ++ L +F M F P+ TF+ +L +CS V GR + +KN+ L
Sbjct: 492 HDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQ--LDD 549
Query: 471 RSAHYTCVVDLLGRFGLIDE-------------------------------AMNLLNEIR 499
+ T ++D+ + +++ A+N +++
Sbjct: 550 NNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQ 609
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL-EPNNSGVYLILTEMYLSCGRRE 558
+G++ + L C +++ G+ V + ++ V L +MY CG E
Sbjct: 610 QEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCME 669
Query: 559 DAKRIFAQM 567
+A+ +F +
Sbjct: 670 EAEALFEAL 678
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 16/290 (5%)
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVG 286
+ Y+ M C + ++ I +VK+ + P S++ W +++ Y +
Sbjct: 112 LKYYSSMLRECASKRSLGVAKAIHGLIVKDVIN-----PDSHL--WVSLVNVYAKCRYSA 164
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A V M RDV W +I GL + + F +M+ G P+ T + L CS
Sbjct: 165 YARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACS 224
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
LDLG+Q+HAQA K+ V +A++ +YA+CG I+ A F +P + ++WN
Sbjct: 225 LCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNV 284
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC-MKNK 465
++ G A G L+LF M D K ++ T VL C+ + + QG+ +K
Sbjct: 285 LLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCG 344
Query: 466 YFLQPRSAHYTC-VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
Y + C +VD+ + GL +A+ + I+ I VW AL+
Sbjct: 345 Y---EGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDI----VVWSALI 387
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 123/289 (42%), Gaps = 36/289 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
M+N + + L++ M RD ++WN + G G D + +F M E +M+T+
Sbjct: 461 MKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFI 520
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM-ISGYVCNGLID---------EALRVF 106
+++ + +V G +V + N + + +VC LID +A F
Sbjct: 521 SILG------SCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAF 574
Query: 107 HGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR--------E 158
+ + ++D+ +W ++I + + A +YF++M V + G + E
Sbjct: 575 NRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLE 634
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G +F D+ + ++ Y GC+ AE LF+ + RD +W +I G
Sbjct: 635 GGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYA 694
Query: 219 NSRRIDAAISYFKQM------PETCEKTWNSIISVLIRNGLVKEAHSYL 261
+ + + A++ F+ M P+ T+ I+S GLV+E +
Sbjct: 695 QNGQGNKALTAFRMMLDEGISPDGV--TFTGILSACSHQGLVEEGKEHF 741
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 185/566 (32%), Positives = 317/566 (56%), Gaps = 45/566 (7%)
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVI 121
D A VFD ++ +++ WN+M G+ + AL+++ M L D ++ +
Sbjct: 37 DGFPYAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFL- 95
Query: 122 GALVNCQRMDLAESYFKEMGAR------------DVASWTIMVNGLVREGRIVEARKLFD 169
L +C A+S ++ G + D+ T +++ + GR+ +ARK+FD
Sbjct: 96 --LKSC-----AKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFD 148
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+DV ++ +IAGY+ G + A+ LF ++ +D+ SW +I+G V + A+
Sbjct: 149 ISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALEL 208
Query: 230 FKQM-------PETCEKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVG- 278
FK+M P+ E T +++S ++ L + HS++ + +++ N ++
Sbjct: 209 FKEMMMMTNVRPD--ESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDL 266
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + GEV +A ++F+ + +DV WN +I G +L +E L F +M SG +P++ T
Sbjct: 267 YSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 326
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN---AMITMYARCGNIQSALLEF-S 394
S+L C+ L +D+GR IH K + T VS+ ++I MYA+CG+I +A F S
Sbjct: 327 LSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDS 386
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
S+ + +WN++I G A HG A A ++F RMR+ +PDDITFVG+LSACS++G++D
Sbjct: 387 SMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDL 446
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
GR F M Y + P+ HY C++DLLG GL EA ++N + +E +W +LL
Sbjct: 447 GRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMP---MEPDGVIWCSLL 503
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
AC+IH N+++GE ++++++EP NSG Y++L+ +Y + GR + +I A + + G+KK
Sbjct: 504 KACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKK 563
Query: 575 E-PGCSWIQINDGGHVFLSGDSSHPK 599
+ PGCS I+I+ H F+ GD HP+
Sbjct: 564 KVPGCSSIEIDSVVHEFIIGDKLHPQ 589
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 186/394 (47%), Gaps = 29/394 (7%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D++ + ++I+ Q+ ++ A++VFD RDVV++ ++I+GYV G I+ A ++F +P
Sbjct: 123 DIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIP 182
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR-----DVASWTIMVNGLVREGRIVEAR 165
KDVVSWN +I V A FKEM D ++ +V+ + I R
Sbjct: 183 GKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGR 242
Query: 166 KLF----DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
+ D A +++ N +I Y G V A +LF + ++D+ SW LI G +
Sbjct: 243 HVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMN 302
Query: 222 RIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEKY---PYSNIAS 271
A+ F++M + E T SI+ G + + H Y+ K +N++S
Sbjct: 303 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSS 362
Query: 272 W-TNVIVGYFEMGEVGSAIKVFE-LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
T++I Y + G++ +A +VF+ M+ R ++ WN MI G + F +M+ +
Sbjct: 363 LQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMN 422
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS----NAMITMYARCGN 385
G PD+ TF +L+ CS LDLGR I + R T MI + G
Sbjct: 423 GIEPDDITFVGLLSACSHSGMLDLGRNIFRS---MTRGYEITPKLEHYGCMIDLLGHSGL 479
Query: 386 IQSALLEFSSVPIH-DIISWNSIICGLAYHGYAE 418
+ A +++P+ D + W S++ HG E
Sbjct: 480 FKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLE 513
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 164/381 (43%), Gaps = 98/381 (25%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N R+++A+ +FD RD V++ +I GY G++++A LF+++P +D+ ++N +I+G
Sbjct: 136 QNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISG 195
Query: 62 LMQSDNVQGAKEVF--------------------------DGMEV-RDVVTW-------- 86
+++ N + A E+F D +E+ R V +W
Sbjct: 196 YVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFAS 255
Query: 87 -----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
N++I Y G ++ A +F G+ KDV+SWN +IG + A F+EM
Sbjct: 256 NLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEML 315
Query: 141 ---------------------GARDVASW--------------------TIMVNGLVREG 159
GA D+ W T +++ + G
Sbjct: 316 RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCG 375
Query: 160 RIVEARKLFD-KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLI 214
I A+++FD M + + WN MI+G+ +G A D+F +M + D ++ L+
Sbjct: 376 DIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLL 435
Query: 215 NGLVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVKEAHSYLEKYPYS-N 268
+ +S +D + F+ M E T + +I +L +GL KEA + P +
Sbjct: 436 SACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPD 495
Query: 269 IASWTNV-----IVGYFEMGE 284
W ++ I G E+GE
Sbjct: 496 GVIWCSLLKACKIHGNLELGE 516
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 212/679 (31%), Positives = 327/679 (48%), Gaps = 81/679 (11%)
Query: 6 IQEAQNLFDKMPQRDT--VTWNVMIRGYFKNGFLDNAM---CLFNQM---PERDMFTYNT 57
+ A +L + P D WN +IR Y NG + + CL + + P+ F +
Sbjct: 75 LSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVF 134
Query: 58 VIAGLMQS----DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
G + S D+ V M +V N++++ Y G + +A +VF MP+ D
Sbjct: 135 KACGEISSVRCGDSSHALSRVTGFMS--NVFVGNALVAMYSRCGSLSDARKVFDEMPVWD 192
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM-----------------------GARDVASW-- 148
VVSWN +I + + +A F +M G R +
Sbjct: 193 VVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFH 252
Query: 149 ---------------TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+V+ + G + EA +F MP KDV +WN M+AGY G
Sbjct: 253 GFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFE 312
Query: 194 VAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSII 245
A LF++M + D+ +W I+G A+ +QM + E T S++
Sbjct: 313 DAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372
Query: 246 SVLIRNGLV---KEAHSYLEKYPY---SNIASWTNVIVG-----YFEMGEVGSAIKVFEL 294
S G + KE H Y KYP N N+++ Y + +V A +F+
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDS 432
Query: 295 MTT--RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG--PSPDNATFTSVLTICSDLPT 350
++ RDV W VMI G ++ + L+ +M E P+ T + L C+ L
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492
Query: 351 LDLGRQIHAQAIKIARNQFTT-VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
L +G+QIHA A++ +N VSN +I MYA+CG+I A L F ++ + ++W S++
Sbjct: 493 LSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMT 552
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
G HGY E+AL +FE MR FK D +T + VL ACS++G++DQG YF+ MK + +
Sbjct: 553 GYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVS 612
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
P HY C+VDLLGR G ++ A+ L+ E+ +E P VW ALL CRIH +++GE A
Sbjct: 613 PGPEHYACLVDLLGRAGRLNAALRLIEEMP---MEPPPVVWVALLSCCRIHGKVELGEYA 669
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
+++ EL NN G Y +L+ MY + GR +D RI + M+ G+KK PGCSW++ G
Sbjct: 670 AKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTT 729
Query: 590 FLSGDSSHPKFHRLRYLLN 608
F GD +HP + +L+
Sbjct: 730 FFVGDKTHPHAKEIYQVLS 748
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 138/323 (42%), Gaps = 42/323 (13%)
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV--WNVMIFGLG 311
VK H L + + +++I Y +G + A+ + D V WN +I G
Sbjct: 44 VKLIHQKLLSFGILTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
N + L F M +PDN TF V C ++ ++ G HA +
Sbjct: 104 NNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVF 163
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT- 430
V NA++ MY+RCG++ A F +P+ D++SWNSII A G + ALE+F +M
Sbjct: 164 VGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEF 223
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
F+PDDIT V VL C+ G G+ + +Q C+VD+ +FG++DE
Sbjct: 224 GFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVG-NCLVDMYAKFGMMDE 282
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
A + + + + W A+ +AG
Sbjct: 283 ANTVFSNMPVKDV----VSWNAM--------------VAG-------------------- 304
Query: 551 YLSCGRREDAKRIFAQMKENGVK 573
Y GR EDA R+F QM+E +K
Sbjct: 305 YSQIGRFEDAVRLFEQMQEEKIK 327
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 201/663 (30%), Positives = 327/663 (49%), Gaps = 81/663 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLD------------------------------ 38
A+ L D+MP+R+ V++N++I Y + G
Sbjct: 62 ARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSR 121
Query: 39 ----------NAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
+A+ + + + +F N++++ + + A+ VFD E RD V+WNS
Sbjct: 122 AGHLRAGRAVHALAILDGLSS-GVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNS 180
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC------QRMDLAESY----FK 138
++SGYV G +E +RVF M + + +G+++ C MD+AE+ K
Sbjct: 181 LVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIK 240
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
DV + M++ ++G +VEA LF + +V +N MIAG+ V +
Sbjct: 241 AGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETV-----I 295
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV---K 255
+++ LT + + V SR + + E T++S++ G + K
Sbjct: 296 GKEVASEALTLYSE-----VQSRGM-----------QPTEFTFSSVLRACNLAGYLEFGK 339
Query: 256 EAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+ H + KY + + ++ YF G + + F D+ W M+ G +N+
Sbjct: 340 QIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNE 399
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
L E+ L F + +G PD T +SV+ C+ L G QI A K ++FT + N
Sbjct: 400 LHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGN 459
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
+ + MYAR G++ +A F + HD++SW+++I A HG A AL F+ M P
Sbjct: 460 SCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVP 519
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
++ITF+GVL+ACS+ GLVD+G Y++ M Y L P H TCVVDLLGR G + +A
Sbjct: 520 NEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAF 579
Query: 495 LNEIRADGI-EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
++ +GI P +W +LL +CRIH +++ G++ R+MELEP +S Y+IL MYL
Sbjct: 580 IS----NGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLD 635
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
G A + MK+ GVKKEPG SWI++ G H F++GD SHP+ + L + +
Sbjct: 636 AGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSR 695
Query: 614 IER 616
IE+
Sbjct: 696 IEK 698
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 156/377 (41%), Gaps = 40/377 (10%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
++ R G + AR+L D+MP ++ ++NL+I Y G ++
Sbjct: 49 LLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLS--------------- 93
Query: 211 KQLINGLVNSRRIDAAISYFK--QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
+ L +RR + F C + + +R G A + L+ S
Sbjct: 94 ---LETLARARRAGVDVDRFSYAAALAACSRAGH------LRAGRAVHALAILDGLS-SG 143
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ +++ Y + GE+G A +VF++ RD WN ++ G EE ++ F M+
Sbjct: 144 VFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRR 203
Query: 329 SGPSPDNATFTSVLTICSDL--PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
G ++ SV+ CS T+D+ +H IK + + +AMI MYA+ G +
Sbjct: 204 GGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGAL 263
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAY------HGYAEKALELFERMRLTDFKPDDITFV 440
A F SV +++ +N++I G A +AL L+ ++ +P + TF
Sbjct: 264 VEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFS 323
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
VL AC+ AG ++ G+ KY Q + ++DL G +++
Sbjct: 324 SVLRACNLAGYLEFGKQIHG-QVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPK 382
Query: 501 DGIEVSPTVWGALLGAC 517
I W A++ C
Sbjct: 383 HDI----VTWTAMVSGC 395
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 183/448 (40%), Gaps = 38/448 (8%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLM 63
EA+ +FD +RD V+WN ++ GY + G + + +F M M F +VI
Sbjct: 162 EARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCS 221
Query: 64 -QSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ D E G ++ DV ++MI Y G + EA +F + +VV +
Sbjct: 222 GRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMF 281
Query: 118 NLVIGALVNCQRM------DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
N +I + + A + + E+ +R + + ++R + + ++
Sbjct: 282 NTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQI 341
Query: 172 PAKDVQ--------AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
+ ++ + +I Y ++GC+ F+ D+ +W +++G V +
Sbjct: 342 HGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELH 401
Query: 224 DAAISYFKQ------MPE--TCEKTWNSIISVLI-RNGLVKEAHSYLEKYPYSNIASWTN 274
+ A+S F + P+ T N+ S+ + R G ++ + K + N
Sbjct: 402 EKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAG--EQIQCFATKSGFDRFTVMGN 459
Query: 275 VIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
V Y G+V +A + F+ M + DV W+ +I ++ + L FF +M ++ P
Sbjct: 460 SCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVP 519
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIK-IARNQFTTVSNAMITMYARCGNIQSALLE 392
+ TF VLT CS +D G + + K + ++ + R G + A
Sbjct: 520 NEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAF 579
Query: 393 FSSVPIH-DIISWNSIICGLAYHGYAEK 419
S+ H D + W S++ H E+
Sbjct: 580 ISNGIFHADPVIWRSLLASCRIHRDLER 607
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 137/340 (40%), Gaps = 41/340 (12%)
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
P +++ ++ Y +G A ++ + M R+ +N++I L L+
Sbjct: 39 PAASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLA 98
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
+ + +G D ++ + L CS L GR +HA AI + VSN++++MY++CG
Sbjct: 99 RARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCG 158
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+ A F D +SWNS++ G G E+ + +F MR + V+
Sbjct: 159 EMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIK 218
Query: 445 ACS------------------YAGLVDQGRYYFDCMKNKY---------------FLQPR 471
CS AGL D + M + Y +P
Sbjct: 219 CCSGRGDGTMDIAEAVHGCVIKAGL-DSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPN 277
Query: 472 SAHYTCVVDLLGRFGLI------DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKV 525
+ ++ R + EA+ L +E+++ G++ + + ++L AC + ++
Sbjct: 278 VVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEF 337
Query: 526 G-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
G +I G+ + + + L ++Y + G ED R F
Sbjct: 338 GKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCF 377
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTV--- 58
+++ F P+ D VTW M+ G +N + A+ LF++ + D+FT ++V
Sbjct: 370 MEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNA 429
Query: 59 ---IAGLMQSDNVQ--GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+A + +Q K FD R V NS + Y +G +D A R F M D
Sbjct: 430 CASLAVARAGEQIQCFATKSGFD----RFTVMGNSCVHMYARSGDVDAATRRFQEMESHD 485
Query: 114 VVSWNLVIG--ALVNCQRMDLAESYFKEM 140
VVSW+ VI A C R L +F EM
Sbjct: 486 VVSWSAVISCHAQHGCARDAL--HFFDEM 512
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 206/668 (30%), Positives = 330/668 (49%), Gaps = 86/668 (12%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-----ERDMFTY------ 55
+A+ L D+MP+R+ V++N++I Y + G + ++ F + D FTY
Sbjct: 64 HQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAA 123
Query: 56 -----------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
N++++ + ++ A+ VFD E RD V+W
Sbjct: 124 CSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSW 183
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC------QRMDLAESY---- 136
NS++SGY+ G +E LRVF M + + +G+++ C +AE+
Sbjct: 184 NSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCV 243
Query: 137 FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
K D+ + MV+ + G + EA LF + +V +N MIAG
Sbjct: 244 VKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLC--------- 294
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIRNG 252
RD V+ + A+S + ++ E E T++S+I G
Sbjct: 295 --------RD--------EAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAG 338
Query: 253 LV---KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+ K+ H + K+ + + ++ YF + + F + +DV W MI
Sbjct: 339 DIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMIS 398
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
G +N+L E L F ++ G PD T +SV+ C+ L + G Q+ A K ++
Sbjct: 399 GCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDR 458
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
FT + N+ I MYAR GN+++A+ F + HD++SW++II A HG A +AL+ F M
Sbjct: 459 FTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMV 518
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
P++ITF+GVL+ACS+ GLVD+G Y++ MK +Y L P H TCVVDLLGR G +
Sbjct: 519 GAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRL 578
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
+A IR P VW +LLG+CRIH +++ G++ +R+MEL+P +SG Y+ L
Sbjct: 579 ADAEAF---IRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLY 635
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
MYL G +I MKE GVKKEPG SWI++ G H F++GD SHP+ + + L
Sbjct: 636 NMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLA 695
Query: 609 LLHTEIER 616
+ ++I++
Sbjct: 696 EMLSKIDK 703
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 48/210 (22%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER------ 50
+A +++ F +P++D VTW MI G +N + A+ LF+++ P+
Sbjct: 372 SACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSV 431
Query: 51 -------------------------DMFTY--NTVIAGLMQSDNVQGAKEVFDGMEVRDV 83
D FT N+ I +S NV+ A + F ME DV
Sbjct: 432 MNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDV 491
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQRMDLAES---YFKE 139
V+W+++IS + +G +AL+ F+ M VV + +G L C L + Y++
Sbjct: 492 VSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEI 551
Query: 140 MGAR-----DVASWTIMVNGLVREGRIVEA 164
M V T +V+ L R GR+ +A
Sbjct: 552 MKMEYGLCPTVKHCTCVVDLLGRAGRLADA 581
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 106/266 (39%), Gaps = 58/266 (21%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R+ ++ A F +M D V+W+ +I + ++G A+ FN+M
Sbjct: 472 RSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMV------------- 518
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-----DVVS 116
GAK V + + V+T S GL+DE LR + M ++ V
Sbjct: 519 --------GAKVVPNEITFLGVLTACSH------GGLVDEGLRYYEIMKMEYGLCPTVKH 564
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARD-VASWTIMVNGL-----VREGRIVEARKLFDK 170
V+ L R+ AE++ ++ D W ++ + G++V A ++ +
Sbjct: 565 CTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLV-ADRIMEL 623
Query: 171 MPAKD---VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT-----SWKQLINGLVNSRR 222
PA V +N+ YLD G + + + M +R + SW +L +G
Sbjct: 624 QPASSGCYVNLYNM----YLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSG------ 673
Query: 223 IDAAISYFKQMPETCEKTWNSIISVL 248
I + ++ K PE C + + +L
Sbjct: 674 IHSFVAGDKSHPE-CNAIYTKLAEML 698
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 186/587 (31%), Positives = 311/587 (52%), Gaps = 28/587 (4%)
Query: 51 DMFTYNTVIAGLMQSD--NVQGAKEVFDGMEVRDVVTWNSMISGYV-----CNGLIDEAL 103
D F + ++A S+ N+ ++ + +V +WN I GYV N ++
Sbjct: 85 DGFALSRLVAFCAISEWRNLDYCDKILNNAANLNVFSWNMAIRGYVESENPINAVLLYRN 144
Query: 104 RVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA-------RDVASWTIMVNGLV 156
+ G + D ++ L+ C L+ + + +G D+ +++ LV
Sbjct: 145 MLRKGSAIPDNYTYPLLFKV---CAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLV 201
Query: 157 REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
G ++ ARKLFD+ +D+ +WN +I GY+ G A DL+ KM + ++ + + G
Sbjct: 202 SCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIG 261
Query: 217 LVNSRRIDAAISYFKQMPETCEKT--------WNSIISVLIRNGLVKEAHSYLEKYPYSN 268
+V++ ++ +++ ++ E+ N+++ + I+ ++ A E
Sbjct: 262 VVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKT 321
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ SWT +++GY + G + SA+++F M +DV +WN +I G + +E L F +M+
Sbjct: 322 VVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQA 381
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
S +PD T + L+ CS L LD+G +H K + A++ MYA+CGNI+
Sbjct: 382 SSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKK 441
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A+ F +P + ++W +IICGLA HG A+ F M PD+ITF+GVLSAC +
Sbjct: 442 AIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCH 501
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
GLVDQGR YF M +KY + P+ HY+C+VDLLGR G ++EA L IR+ E
Sbjct: 502 GGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEEL---IRSMPFEPDAV 558
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
VWGAL RIH N+ +GE A +++EL+P++ G+Y++L MY E A+++ M+
Sbjct: 559 VWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMME 618
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
E GV+K PGCS I++N + F+ D SHP+ ++ L L +IE
Sbjct: 619 ERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIE 665
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 188/400 (47%), Gaps = 25/400 (6%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+ D+F +N +I L+ + A+++FD VRD+V+WNS+I+GYV GL DEA +++
Sbjct: 187 DSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYK 246
Query: 109 MP----LKDVVSWNLVIGALVNCQRMDLAESY---FKEMGAR-DVASWTIMVNGLVREGR 160
M + D V+ V+ A + + L +EMG V +++ ++
Sbjct: 247 MGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKN 306
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
I A+ LF+ M K V +W M+ GY G + A LF +M ++D+ W LI G V +
Sbjct: 307 IEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQA 366
Query: 221 RRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLVKEA---HSYLEKYPYS-NIASW 272
+R A++ F +M + + T + +S + G + H Y++K+ + N+A
Sbjct: 367 KRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALG 426
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T ++ Y + G + AI+VFE M R+ W +I GL + + +F +M G
Sbjct: 427 TALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLV 486
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAI-KIARNQFTTVSNAMITMYARCGNIQSALL 391
PD TF VL+ C +D GR Q K + + ++ + R G ++ A
Sbjct: 487 PDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEE 546
Query: 392 EFSSVPIH-DIISWNSIICGLAYHG-------YAEKALEL 423
S+P D + W ++ G HG A K LEL
Sbjct: 547 LIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLEL 586
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 155/371 (41%), Gaps = 83/371 (22%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSD-- 66
A+ LFD+ RD V+WN +I GY + G D A L+ +M E ++ + G++ +
Sbjct: 209 ARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQ 268
Query: 67 -------------------------------------NVQGAKEVFDGMEVRDVVTWNSM 89
N++ AK +F+ M + VV+W +M
Sbjct: 269 LENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTM 328
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
+ GY GL++ A+R+F+ MP KDVV WN +IG V +R A + F EM A VA
Sbjct: 329 VIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDK 388
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAW--------NL---------MIAGYLDNGCV 192
I V V ++ A DV W NL ++ Y G +
Sbjct: 389 ITV---------VNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNI 439
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIIS 246
A +F++M R+ +W +I GL + AAISYF +M P+ E T+ ++S
Sbjct: 440 KKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPD--EITFIGVLS 497
Query: 247 VLIRNGLVKEAHSYL----EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT----R 298
GLV + Y KY S + +V +G G + EL+ +
Sbjct: 498 ACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDL--LGRAGFLEEAEELIRSMPFEP 555
Query: 299 DVTVWNVMIFG 309
D VW + FG
Sbjct: 556 DAVVWGALFFG 566
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 156/345 (45%), Gaps = 50/345 (14%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I+ A+ LF+ M ++ V+W M+ GY K G L++A+ LFN+MPE+D+ +N +I G +Q+
Sbjct: 307 IEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQA 366
Query: 66 DNVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ A +F M+ V +T + +S G +D + + H + K ++ N+ +
Sbjct: 367 KRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVD-KHNLTMNVAL 425
Query: 122 G-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
G ALV+ C + A F+EM R+ +WT ++ GL G+ A F +M + +
Sbjct: 426 GTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGL 485
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
+ G L C G GLV+ R YF QM
Sbjct: 486 VPDEITFIGVLSACCHG----------------------GLVDQGR-----DYFYQMTSK 518
Query: 237 CE-----KTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNV-----IVGYFEMGEV 285
K ++ ++ +L R G ++EA + P+ + W + I G MGE
Sbjct: 519 YGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGE- 577
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
+A K+ EL D ++ ++ G+ ++ E+ K M+E G
Sbjct: 578 RAASKLLEL-DPHDGGIYVLLANMYGDANMWEQARKVRKMMEERG 621
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 177/496 (35%), Positives = 277/496 (55%), Gaps = 30/496 (6%)
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
T ++N + G +V AR +FDK +D ++ +I GY G + A +LF ++ RD+
Sbjct: 167 TSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVV 226
Query: 209 SWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVLIRNG----LVKEAH 258
SW +I+G S R++ A+++F++M P T S++S ++G L
Sbjct: 227 SWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNV--STMLSVLSACAQSGSSLQLGNWVR 284
Query: 259 SYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
S++E SNI +I Y + G++ A +FE + ++V WNVMI G +
Sbjct: 285 SWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYK 344
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS--NA 375
E L F +M +S P++ TF S+L C++L LDLG+ +HA K ++ TV+ +
Sbjct: 345 EALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTS 404
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
+I MYA+CG++ A F + + +WN++I G A HG+ + AL LF RM F PD
Sbjct: 405 LIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPD 464
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
DITFVGVL+AC +AGL+ GR YF M Y + P+ HY C++DL GR GL DEA L+
Sbjct: 465 DITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLV 524
Query: 496 N--EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
E++ DG +W +LLGACRIH I++ E + + ELEP N Y++L+ +Y
Sbjct: 525 KNMEMKPDG-----AIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAG 579
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
GR ED +I ++ +N +KK PGCS I+++ H FL GD HP+ + + +L+ +
Sbjct: 580 AGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMR 639
Query: 614 IER--------EILFD 621
+E+ E+L+D
Sbjct: 640 LEKAGFVPDTSEVLYD 655
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 208/425 (48%), Gaps = 28/425 (6%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
E + F + ++I Q+ + A+ VFD +RD V++ ++I+GY G +DEA +F
Sbjct: 160 EHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDE 219
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG----ARDVASWTIMVNGLVREGRIVEA 164
+P++DVVSWN +I R++ A ++F+EM +V++ +++ + G ++
Sbjct: 220 IPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQL 279
Query: 165 RK-----LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
+ D+ +++ N +I Y+ G + A +LF+K+ D+++ SW +I G +
Sbjct: 280 GNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTH 339
Query: 220 SRRIDAAISYFKQMPET----CEKTWNSIISVLIRNG---LVKEAHSYLEKYPYS---NI 269
A+ F++M ++ + T+ SI+ G L K H+Y++K S +
Sbjct: 340 MSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTV 399
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
A WT++I Y + G++ A ++F+ M T+ + WN MI G + + L F +M
Sbjct: 400 ALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSE 459
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR-NQFTTVSNAMITMYARCGNIQS 388
G PD+ TF VLT C L LGR+ + I+ + + MI ++ R G
Sbjct: 460 GFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDE 519
Query: 389 ALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERM--RLTDFKPDDITFVGVLSA 445
A ++ + D W S++ H + +EL E + L + +P++ + +LS
Sbjct: 520 AETLVKNMEMKPDGAIWCSLLGACRIH----RRIELAESVAKHLFELEPENPSAYVLLSN 575
Query: 446 CSYAG 450
YAG
Sbjct: 576 I-YAG 579
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 172/377 (45%), Gaps = 49/377 (12%)
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------P-------- 234
+G + A LF+ + + + W +I GL +S A+ Y+ M P
Sbjct: 75 HGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSI 134
Query: 235 -ETCEK------------------------TWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
++C K S+I++ +NG + A +K +
Sbjct: 135 FKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDA 194
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
S+T +I GY G + A ++F+ + RDV WN MI G ++ EE + FF +M+ +
Sbjct: 195 VSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRA 254
Query: 330 GPSPDNATFTSVLTICSDL-PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
+P+ +T SVL+ C+ +L LG + + + N +I MY +CG+++
Sbjct: 255 KVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEE 314
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F + +++SWN +I G + ++AL LF RM ++ P+D+TF+ +L AC+
Sbjct: 315 ASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACAN 374
Query: 449 AGLVDQGRY---YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
G +D G++ Y D KN ++ A +T ++D+ + G + A + + + +
Sbjct: 375 LGALDLGKWVHAYVD--KNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSL-- 430
Query: 506 SPTVWGALLGACRIHNN 522
W A++ +H +
Sbjct: 431 --ATWNAMISGFAMHGH 445
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 143/350 (40%), Gaps = 65/350 (18%)
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G++ A+ +F+ + + +WN MI GL ++ L+++V M SG P+ TF S+
Sbjct: 76 GDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIF 135
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS------- 395
C+ + G+Q+HA +K+ V ++I MYA+ G + +A L F
Sbjct: 136 KSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAV 195
Query: 396 ------------------------VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
+P+ D++SWN++I G A G E+A+ FE MR
Sbjct: 196 SFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAK 255
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
P+ T + VLSAC+ +G Q + L ++D+ + G ++EA
Sbjct: 256 VTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEA 315
Query: 492 MNLLNEIR-------------------------------ADGIEVSPTVWGALLGACRIH 520
NL +I+ I+ + + ++L AC
Sbjct: 316 SNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANL 375
Query: 521 NNIKVGEIAGERV---MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ +G+ V M+ N ++ L +MY CG AKRIF M
Sbjct: 376 GALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCM 425
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 139/353 (39%), Gaps = 94/353 (26%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N + A+ +FDK RD V++ +I GY GFLD A LF+++P RD+ ++N +I+G
Sbjct: 175 QNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISG 234
Query: 62 LMQSDNVQGAKEVFDGMEVRDVV---------------------------TW-------- 86
QS V+ A F+ M V +W
Sbjct: 235 YAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGS 294
Query: 87 -----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
N +I YV G ++EA +F + K+VVSWN++IG + A F+ M
Sbjct: 295 NIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMM 354
Query: 141 ---------------------GARD-------------------VASWTIMVNGLVREGR 160
GA D VA WT +++ + G
Sbjct: 355 QSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGD 414
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRD-----------LTS 209
+ A+++FD M K + WN MI+G+ +G A LF +M LT+
Sbjct: 415 LAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTA 474
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLE 262
K + R + I +K P+ + +I + R GL EA + ++
Sbjct: 475 CKHAGLLSLGRRYFSSMIQDYKVSPKL--PHYGCMIDLFGRAGLFDEAETLVK 525
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGLMQ 64
A+ +FD M + TWN MI G+ +G D A+ LF++M D T+ V+
Sbjct: 418 AKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKH 477
Query: 65 SDNVQGAKEVFDGMEVRD------VVTWNSMISGYVCNGLIDEALRVFHGMPLK-DVVSW 117
+ + + F M ++D + + MI + GL DEA + M +K D W
Sbjct: 478 AGLLSLGRRYFSSM-IQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIW 536
Query: 118 NLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
++GA +R++LAES K E+ + +++ ++ N GR + K+ ++
Sbjct: 537 CSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRL 593
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
Query: 329 SGPSPDNATFT--SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC--G 384
S PSP LT+ S+ TL +QIH+Q IK + + +I A G
Sbjct: 17 SDPSPPYKLVHDHPSLTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHG 76
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
++ AL F ++ + + WN +I GL+ ALE + M + +P++ TF +
Sbjct: 77 DLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFK 136
Query: 445 ACSYAGLVDQGR 456
+C+ +G+
Sbjct: 137 SCTKIRGAHEGK 148
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 198/664 (29%), Positives = 317/664 (47%), Gaps = 75/664 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------- 48
N + +AQ LFD +PQ+D+V WNVM+ GY KNG NA+ +F +M
Sbjct: 105 ENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFAC 164
Query: 49 --------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
E D NT++A + +Q A+++FD D
Sbjct: 165 VLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSD 224
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
+V+WN +ISGYV NGL+ EA +F GM + ++ + + C L+ + KE+
Sbjct: 225 LVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHG 284
Query: 143 R--------DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
DV + +++ + + A+K+ + + D MI+GY+ NG
Sbjct: 285 YIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKE 344
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A + F+ W LV R ++++ P + L L
Sbjct: 345 ALEAFR---------W------LVQERMKPTSVTFSSIFPA---------FAGLAALNLG 380
Query: 255 KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
KE H + K + I+ Y + G + A +VF +T +D WN MI +N
Sbjct: 381 KELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQN 440
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
E + F QM G D + + L+ C++LP L G++IH IK
Sbjct: 441 GRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAE 500
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
+++I MYA+CGN+ + F + + +SWNSII HG ++ L LF M +
Sbjct: 501 SSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQ 560
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
PD +TF+G++SAC +AG VD+G Y+ M +Y + R HY CV D+ GR G +DEA
Sbjct: 561 PDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFE 620
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
+N + VWG LLGAC IH N+++ E+A + + +L+P NSG Y++L +
Sbjct: 621 TINSMP---FPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAG 677
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
G+ ++ + MKE GV+K PG SWI++N+ H+F++ D SHP ++ +L+ L E
Sbjct: 678 AGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLE 737
Query: 614 IERE 617
+++E
Sbjct: 738 LKKE 741
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 147/646 (22%), Positives = 276/646 (42%), Gaps = 116/646 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER---- 50
+R +++A+NLF + T WN MIRG+ G + A+ + +M P++
Sbjct: 3 VRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFP 62
Query: 51 -----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
D+F +++I ++ ++ A+ +FD + +
Sbjct: 63 YVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQK 122
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYF 137
D V WN M++GYV NG A+++F M ++ V++ V+ + +DL
Sbjct: 123 DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLH 182
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ + + + N L+ + + ARKLFD P D+ +WN +I+GY+ NG +G
Sbjct: 183 GIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMG 242
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
AE LF+ G++++ +I++ +P ++ L+
Sbjct: 243 EAEHLFR---------------GMISAGIKPDSITFASFLP---------CVNELLSLKH 278
Query: 254 VKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
KE H Y+ ++ ++ + +I YF+ +V A K+ ++ D V MI G
Sbjct: 279 CKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVL 338
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N +E L+ F + + P + TF+S+ + L L+LG+++H IK ++ V
Sbjct: 339 NGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHV 398
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+A++ MYA+CG + A F+ + D I WNS+I + +G +A+ LF +M +
Sbjct: 399 GSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGT 458
Query: 433 KPDDITFVGVLSACS----------YAGLVDQG-------------------------RY 457
+ D ++ G LSAC+ GL+ +G R
Sbjct: 459 RYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRR 518
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
FD M+ + + ++ G G + E + L +E+ +GI+ + ++ AC
Sbjct: 519 VFDRMQER-----NEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISAC 573
Query: 518 RIHNNIKVGEIAGERVMELE---PNNSGVYLILTEMYLSCGRREDA 560
+ G I +M E P Y + +M+ GR ++A
Sbjct: 574 GHAGQVDEG-IRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEA 618
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y G + A +F + + WN MI G L F+++M +G SPD TF
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
V+ C L ++ +G+ +H + + V +++I +YA G++ A F ++P
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
D + WN ++ G +G + A+++F MR ++ KP+ +TF VLS C+ ++D G
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 199/637 (31%), Positives = 337/637 (52%), Gaps = 41/637 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYN 56
+R + A N+F +M +RD +WNV++ GY K GF D A+CL++++ D++T+
Sbjct: 80 VRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFP 139
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVF 106
+V+ + GA ++ G EV DV N++I+ YV G + A +F
Sbjct: 140 SVLR------SCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLF 193
Query: 107 HGMPLKDVVSWNLVI-GALVNCQRMDLAESYFK--EMGAR-DVASWTIMVNG--LVREGR 160
MP +D +SWN +I G N + ++ E +F+ E+ D+ + T +++ L+ + R
Sbjct: 194 DKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDER 253
Query: 161 IVEARKLFDKMPAKD--VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
+ + A D + +N +I YL G AE +F M RD+ SW +I+G V
Sbjct: 254 LGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCV 313
Query: 219 NSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLVK---EAHSYLEKYPYSNIAS 271
++ D A+ +K M T E T S++S G + + H E+ +
Sbjct: 314 DNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVV 373
Query: 272 WTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
N ++ Y + + A+++F + +DV W +I GL N+ E L FF +M
Sbjct: 374 VANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS 433
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
P++ T S L+ C+ + L G++IHA A+K + NA++ +Y RCG +++AL
Sbjct: 434 -KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTAL 492
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
+F+ + D+ +WN ++ G A G +ELF+RM ++ PDD+TF+ +L ACS +G
Sbjct: 493 NQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSG 551
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
+V +G YF MK Y + P HY CVVDLLGR G ++EA + + I+ P +W
Sbjct: 552 MVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERM---PIKPDPAIW 608
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
GALL ACRIH ++ +GE+A + + + + + G Y++L +Y G+ ++ ++ MKE
Sbjct: 609 GALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEE 668
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
G+ +PGCSW+++ H FLSGD+ HP+ + +L
Sbjct: 669 GLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVL 705
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/414 (30%), Positives = 203/414 (49%), Gaps = 42/414 (10%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PL 111
N +++ ++ +V A VF M RD+ +WN ++ GY G DEAL ++H +
Sbjct: 73 NALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIR 132
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGAR--------DVASWTIMVNGLVREGRIVE 163
DV ++ V+ + MDL +E+ A DV ++ V+ G +V
Sbjct: 133 PDVYTFPSVLRSCAGA--MDLVRG--REVHAHVVRFDFDMDVDVVNALITMYVKCGDVVS 188
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
AR LFDKMP +D +WN MI+GY +N +LF +M R+L+ I
Sbjct: 189 ARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRM--RELS--------------I 232
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEM 282
D + + CE +L L + HSY+ + Y NI+ + ++I Y +
Sbjct: 233 DPDLMTMTSVISACE--------LLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSV 284
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G A VF M RDV W +I G +N L ++ L+ + M+ +G PD T SVL
Sbjct: 285 GHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVL 344
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
+ C+ L LD+G ++H A + + V+N++I MY++C I+ AL F +P D+I
Sbjct: 345 SACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVI 404
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
SW S+I GL + +AL F +M L KP+ +T + LSAC+ G + G+
Sbjct: 405 SWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMCGK 457
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 211/438 (48%), Gaps = 40/438 (9%)
Query: 158 EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL 217
EG V L + V+ N +++ ++ G VG A ++F +M +RDL SW L+ G
Sbjct: 51 EGEYVWKAVLSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGY 110
Query: 218 VNSRRIDAAISYFKQM------PETCEKTWNSIISV------LIRNGLVKEAHSYLEKYP 265
+ D A+ + ++ P+ T+ S++ L+R +E H+++ ++
Sbjct: 111 TKAGFFDEALCLYHRILWAGIRPDV--YTFPSVLRSCAGAMDLVRG---REVHAHVVRFD 165
Query: 266 YSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
+ N ++ Y + G+V SA +F+ M TRD WN MI G END EGL+ F
Sbjct: 166 FDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFF 225
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
+M+E PD T TSV++ C L LG Q+H+ ++ A + +V N++I MY G
Sbjct: 226 RMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVG 285
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+ + A FS + D++SW +II G + +KALE ++ M +T PD++T VLS
Sbjct: 286 HWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLS 345
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV------DLLGRFGLIDEAMNLLNEI 498
AC+ G +D G + L R+ H VV D+ + I++A+ + ++I
Sbjct: 346 ACASLGQLDMGMKLHE-------LAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQI 398
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGER-VMELEPNNSGVYLILTEM----YLS 553
+ W +++ RI+N I + +++ +PN+ + L+ L
Sbjct: 399 PDKDV----ISWTSVINGLRINNRCFEALIFFRKMILKSKPNSVTLISALSACARVGALM 454
Query: 554 CGRREDAKRIFAQMKENG 571
CG+ A + A M +G
Sbjct: 455 CGKEIHAHALKAGMGFDG 472
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 208/735 (28%), Positives = 339/735 (46%), Gaps = 127/735 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRG------------YFKN----GFLDNAMCLFNQMP- 48
++ A+ +FDKMP+RD V WN MI G +F++ G +++ L N P
Sbjct: 180 LKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPG 239
Query: 49 ------------------ERDMFT--YNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
RD + N +I + +V A+ VFD M +D V+W +
Sbjct: 240 ICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGT 299
Query: 89 MISGYVCNGLIDEALRVF----------------------------------HGMPLKDV 114
M++GY NG E L +F HG L+
Sbjct: 300 MMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQR 359
Query: 115 VSWNLVIGA-----LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
+ ++++ C + A+ F + RD+ +W+ ++ LV+ G EA LF
Sbjct: 360 IDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQ 419
Query: 170 KM----------------PA-----------------------KDVQAWNLMIAGYLDNG 190
+M PA D+ +++ Y G
Sbjct: 420 EMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCG 479
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWNSIISVLI 249
A F +M RD+ +W LING AI F ++ +++ V+
Sbjct: 480 FFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVP 539
Query: 250 RNGLVKE------AHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMT-TRDVT 301
L+ + H + K + + N ++ Y + G + SA +F T+D
Sbjct: 540 ACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEV 599
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WNV+I +N +E + F QM+ P++ TF SVL + L G HA
Sbjct: 600 TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACI 659
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
I++ T V N++I MYA+CG + + F+ + D +SWN+++ G A HG+ ++A+
Sbjct: 660 IQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAI 719
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
LF M+ + + D ++FV VLSAC +AGLV++GR F M +KY ++P HY C+VDL
Sbjct: 720 ALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDL 779
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LGR GL DE + I+ +E VWGALLG+CR+H+N+K+GE+A + +++LEP N
Sbjct: 780 LGRAGLFDETLGF---IKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNP 836
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFH 601
+++L+ +Y GR DA + ++M + G+KK PGCSW+++ + H F GD SHP+
Sbjct: 837 AHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLE 896
Query: 602 RLRYLLNLLHTEIER 616
+ L N L ++E+
Sbjct: 897 SMHLLWNTLLEKMEK 911
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 176/675 (26%), Positives = 287/675 (42%), Gaps = 125/675 (18%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAM----CLFNQMPERDMFTYNTVIAGLMQ 64
A+++FD P + WN MIR Y ++ + A+ C+ + E D +T+ V+
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 65 SDNVQG-----------------------------------AKEVFDGMEVRDVVTWNSM 89
+ N+Q A+EVFD M RDVV WN+M
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 201
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEMGARDV 145
I+G + EA+ F M L V VS + + ++L S + RD
Sbjct: 202 IAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF 261
Query: 146 ASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+S + NGL+ + G + AR++FD+M +D +W M+AGY NGC +LF K
Sbjct: 262 SS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDK 319
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS-Y 260
M +L N +N +A+S F ET + + G KE H
Sbjct: 320 M---------KLGNVRINKV---SAVSAFLAAAETID----------LEKG--KEIHGCA 355
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
L++ S+I T ++V Y + GE A ++F + RD+ W+ +I L + EE L
Sbjct: 356 LQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEAL 415
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F +M+ P+ T S+L C+DL L LG+ IH +K + + A+++MY
Sbjct: 416 SLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMY 475
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
A+CG +AL F+ + DI++WNS+I G A G A+++F ++RL+ PD T V
Sbjct: 476 AKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMV 535
Query: 441 GVLSACSYAGLVDQGRYYFDCMKN---KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
GV+ AC+ +DQG C+ K + ++D+ + G + A L N+
Sbjct: 536 GVVPACALLNDLDQGT----CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNK 591
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIK--VGEIAGERVMELEPNN--------SGVYLI- 546
EV+ W ++ A + + K + R+ PN+ + YL
Sbjct: 592 TDFTKDEVT---WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAA 648
Query: 547 -------------------------LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
L +MY CG+ + ++++F +M SW
Sbjct: 649 FREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDT-----VSWN 703
Query: 582 QINDGGHVFLSGDSS 596
+ G V GD +
Sbjct: 704 AMLSGYAVHGHGDRA 718
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 134/332 (40%), Gaps = 47/332 (14%)
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
S T++I Y + A VF+ +WN MI + E L+ + M E G
Sbjct: 65 SITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKG 124
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
PD TFT VL C+ L G H + + + + ++ MY++ G+++ A
Sbjct: 125 LEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAR 184
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV---------- 440
F +P D+++WN++I GL+ +A++ F M+L +P ++ +
Sbjct: 185 EVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLS 244
Query: 441 -----------------------GVLSACSYAGLVDQGRYYFDCMKNK-----YFLQPRS 472
G++ S G VD R FD M ++ +
Sbjct: 245 NIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGY 304
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
AH C V++L F + M L N +R + + + A L A + K EI G
Sbjct: 305 AHNGCFVEVLELF----DKMKLGN-VRINKV----SAVSAFLAAAETIDLEKGKEIHGCA 355
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ + ++ V L MY CG E AK++F
Sbjct: 356 LQQRIDSDILVATPLMVMYAKCGETEKAKQLF 387
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 13/183 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ ++ ++ LF++M +DTV+WN M+ GY +G D A+ LF+ M E D ++ +
Sbjct: 680 KCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVS 739
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V++ + V+ +++F M + D+ + M+ GL DE L MP++
Sbjct: 740 VLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVE 799
Query: 113 -DVVSWNLVIGAL---VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
D W ++G+ N + ++A + ++ R+ A + ++ + + GR +A K
Sbjct: 800 PDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKAR 859
Query: 169 DKM 171
KM
Sbjct: 860 SKM 862
>gi|218197545|gb|EEC79972.1| hypothetical protein OsI_21597 [Oryza sativa Indica Group]
Length = 731
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 177/589 (30%), Positives = 311/589 (52%), Gaps = 15/589 (2%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
N R+ +A+ FD+MP R+ V+W MI+G+F +D A LF MP ++ ++ +I G
Sbjct: 148 NHRVGDARKAFDRMPVRNVVSWTAMIKGHFTVHEVDMAFQLFKLMPVKNSVSWCVMIGGF 207
Query: 63 MQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ + A E+F+ G EV +V+ +++ + I R HG+ +K ++
Sbjct: 208 VTHEKFSEAVELFNSLMMNGEEVTNVILVK-IVNAFAGMKSIRGG-RCIHGLAVKSGFAY 265
Query: 118 NLVIGA---LVNCQRMDLAESY--FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
+LV+ A L+ C+ +D+ E+ F +M V SW M+ G + +I EARKLFD M
Sbjct: 266 DLVLEASLVLMYCKSLDITEARLEFDKMEGNHVGSWNAMLCGYIYSDKIDEARKLFDSMN 325
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+D +WN MI GY+++G + A +L+ KM ++ L + L++ +++ +D A F
Sbjct: 326 NRDKISWNSMINGYINDGRIADATELYSKMTEKSLEAATALMSWFIDNGMLDKARDMFYN 385
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
MP+ + +++ ++ G + +A + ++ +I G F G++ A K+F
Sbjct: 386 MPQIDVMSCTTLLFGYVKGGHMDDALDLFHMMQKRTVVTYNVMISGLFHQGKITEAYKLF 445
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
TRD W+ ++ GL N L E L+F+ +M S P + +S+++ S+ +
Sbjct: 446 NESPTRDSVTWSCLVAGLATNGLIHEALQFYKKMLLSNIRPSESVVSSLISCLSNYSMMV 505
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
G+Q HA IKI + + N++I++Y +CG + A F + D ++WN+II G A
Sbjct: 506 HGQQFHATTIKIGLDSHLLIQNSLISLYCKCGEMIIAQSIFDLMAKRDKVTWNTIIHGYA 565
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
+ + A+E+FE M PDDITF+GVLSAC++ L+++ +Y+F+ M Y + P
Sbjct: 566 LNNLGQNAVEMFESMTKAQVDPDDITFLGVLSACNHMSLLEEAKYFFNAMTCTYGILPNI 625
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
HY C+VDL R +I EA L +++ E +W +LL CR+ N K+ E A +
Sbjct: 626 MHYACMVDLFCRKCMIKEAEGL---VKSMPFEPDSAIWTSLLSGCRLTGNDKLAEHAASQ 682
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
++ ++P YL L ++ + + +Q+K +K+ G SWI
Sbjct: 683 LIAIDPCTKMPYLHLISVHGLTNKSTVIDSLRSQIKSTATEKDVGYSWI 731
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 204/472 (43%), Gaps = 69/472 (14%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK--- 112
N ++A +++ ++ A+EVFDGM RDVV+WN++++ G A+ F M +
Sbjct: 39 NRLMAEHLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAVGAFLEMRRQGFR 98
Query: 113 -DVVSWNLVIGALVNCQRMDLA---ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
D S++ + A + +++ E + + +VA W +++GLV R+ +ARK F
Sbjct: 99 PDHTSFSTALSACARLEALEMGSCLEQVLDGVESPNVALWNALISGLVMNHRVGDARKAF 158
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
D+MP ++V +W MI G+ V +A LF+ M ++ SW +I G V + A+
Sbjct: 159 DRMPVRNVVSWTAMIKGHFTVHEVDMAFQLFKLMPVKNSVSWCVMIGGFVTHEKFSEAVE 218
Query: 229 YFKQMPETCEKTWNSII--------------------SVLIRNGL--------------- 253
F + E+ N I+ + +++G
Sbjct: 219 LFNSLMMNGEEVTNVILVKIVNAFAGMKSIRGGRCIHGLAVKSGFAYDLVLEASLVLMYC 278
Query: 254 ----VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
+ EA +K +++ SW ++ GY ++ A K+F+ M RD WN MI G
Sbjct: 279 KSLDITEARLEFDKMEGNHVGSWNAMLCGYIYSDKIDEARKLFDSMNNRDKISWNSMING 338
Query: 310 LGENDLGEEGLKFFVQMKESGPSP---------DNATFTSVLTICSDLPTLDL------- 353
+ + + + +M E DN + ++P +D+
Sbjct: 339 YINDGRIADATELYSKMTEKSLEAATALMSWFIDNGMLDKARDMFYNMPQIDVMSCTTLL 398
Query: 354 ------GRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
G A + + T V+ N MI+ G I A F+ P D ++W+
Sbjct: 399 FGYVKGGHMDDALDLFHMMQKRTVVTYNVMISGLFHQGKITEAYKLFNESPTRDSVTWSC 458
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
++ GLA +G +AL+ +++M L++ +P + ++S S ++ G+ +
Sbjct: 459 LVAGLATNGLIHEALQFYKKMLLSNIRPSESVVSSLISCLSNYSMMVHGQQF 510
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+N ++ + R G +++A F +P D++SWN+I+ A G +A+ F MR F
Sbjct: 38 NNRLMAEHLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAVGAFLEMRRQGF 97
Query: 433 KPDDITFVGVLSACSYAGLVDQG 455
+PD +F LSAC+ ++ G
Sbjct: 98 RPDHTSFSTALSACARLEALEMG 120
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 267/462 (57%), Gaps = 37/462 (8%)
Query: 158 EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL 217
G + AR+LFD+ P +DV +WN +I GY+ +G A +LF W+ +G
Sbjct: 169 RGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELF----------WRLAEDG- 217
Query: 218 VNSRRID-----AAISYFKQMPET----------------CE-KTWNSIISVLIRNGLVK 255
N+ R D A+S QM + C + N+++ + ++ G ++
Sbjct: 218 -NAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLE 276
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
A+S E+ SWT +IVG+ +G + A +F+ M RDV WN ++ G +N
Sbjct: 277 LANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQ 336
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
G+E + F +M++S P+ T ++L+ CS L L++G +H + + + +
Sbjct: 337 GKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTS 396
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
++ MYA+CGNI+ A+ F+ +P+ + ++W S+ICGLA HG+A++A+E F+RM +PD
Sbjct: 397 LVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPD 456
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
+ITF+GVLSAC +AGLV+ GR +F M KY L+ + HY+C++DLLGR G +DEA L+
Sbjct: 457 EITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLV 516
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
N + D V VWGAL ACR+H NI +GE A +++EL+P++SG+Y++L MY
Sbjct: 517 NAMPMDPDAV---VWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEAN 573
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
R+ A ++ M+ GV+K PGCS I++N H F+ D SH
Sbjct: 574 MRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSH 615
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 205/452 (45%), Gaps = 58/452 (12%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF---- 75
D N + + G + A LF++ P RD+ ++NT+I G ++S + A E+F
Sbjct: 155 DVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLA 214
Query: 76 -DGMEVR-DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS----WNLVIGALVNCQR 129
DG VR D VT +SG G ++ R+ + K V N V+ V C
Sbjct: 215 EDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGS 274
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
++LA S F+ + R SWT M+ G R G + +AR LFD+MP +DV WN ++AGY+ N
Sbjct: 275 LELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQN 334
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI 249
A LF +M K + E T +++S
Sbjct: 335 KQGKEAIALFHEMQ---------------------------KSKVDPNEITMVNLLSACS 367
Query: 250 RNGLVKEA---HSYLEKYP-YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV 305
+ G ++ H Y++++ + ++A T+++ Y + G + AI VF + ++ W
Sbjct: 368 QLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTS 427
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ----IHAQA 361
MI GL + +E +++F +M + G PD TF VL+ C ++ GRQ +HA
Sbjct: 428 MICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHA-- 485
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHG---YA 417
K + + MI + R G++ A +++P+ D + W ++ HG
Sbjct: 486 -KYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRMHGNITLG 544
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYA 449
EKA M+L + P D + + VL A YA
Sbjct: 545 EKA-----AMKLVELDPSD-SGIYVLLANMYA 570
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 119/247 (48%), Gaps = 19/247 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ A ++F+++ R V+W MI G+ + G +++A LF++MPERD+F +N ++AG +Q+
Sbjct: 275 LELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQN 334
Query: 66 DNVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ A +F M+ V +T +++S G ++ + V H + + + ++ +
Sbjct: 335 KQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYID-RHKLHLSVAL 393
Query: 122 G-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
G +LV+ C + A F E+ ++ +WT M+ GL G EA + F +M +
Sbjct: 394 GTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGL 453
Query: 177 QAWNLMIAGYLDNGC----VGVAEDLFQKMH-----DRDLTSWKQLINGLVNSRRIDAAI 227
Q + G L C V F MH +R + + +I+ L + +D A
Sbjct: 454 QPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAE 513
Query: 228 SYFKQMP 234
MP
Sbjct: 514 QLVNAMP 520
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 32/237 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R +++A+ LFD+MP+RD WN ++ GY +N A+ LF++M + + +
Sbjct: 302 RLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVN 361
Query: 62 LMQSDNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
L+ + + GA E+ GM V V S++ Y G I +A+ VF+ +P+
Sbjct: 362 LLSACSQLGALEM--GMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPV 419
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKL 167
++ ++W +I L N D A YF+ M G + D ++ +++ G + R+
Sbjct: 420 QNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQF 479
Query: 168 FDKMPAK-----DVQAWNLMI-----AGYLDNGCVGVAEDLFQKMH-DRDLTSWKQL 213
F M AK ++ ++ MI AG+LD AE L M D D W L
Sbjct: 480 FSLMHAKYHLERKMKHYSCMIDLLGRAGHLDE-----AEQLVNAMPMDPDAVVWGAL 531
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 320 LKFFVQMKESGPS-PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L + + SG + PD+ TF ++ C+ L G + K+ + V NA +
Sbjct: 105 LPLYRALLHSGSARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMH 164
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL--TDFKPDD 436
++ G + A F P+ D++SWN++I G G +ALELF R+ +PD+
Sbjct: 165 FWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDE 224
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNK 465
+T +G +S C+ G ++ G+ + + NK
Sbjct: 225 VTVIGAVSGCAQMGDLELGKRLHEFVDNK 253
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 202/663 (30%), Positives = 324/663 (48%), Gaps = 81/663 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLD------------------------------ 38
A+ L D+MP+R+ V++N++I Y + G
Sbjct: 62 ARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSR 121
Query: 39 ----------NAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
+A+ + + + +F N++++ + + A+ VFD E RD V+WNS
Sbjct: 122 AGHLRAGRAVHALAILDGLSS-GVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNS 180
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC------QRMDLAESY----FK 138
++SGYV G +E +RVF M + + +G+++ C MD+AE+ K
Sbjct: 181 LVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIK 240
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
DV + M++ ++G +VEA LF + +V +N MIAG+ V +
Sbjct: 241 AGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETV-----I 295
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV---K 255
+++ LT + + V SR + + E T++S++ G + K
Sbjct: 296 GKEVASEALTLYSE-----VQSRGM-----------QPTEFTFSSVLRACNLAGYLEFGK 339
Query: 256 EAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+ H + KY + + ++ YF G + + F D+ W M+ G +N+
Sbjct: 340 QIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNE 399
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
L E+ L F + +G PD T +SV+ C+ L G QI A K ++FT + N
Sbjct: 400 LHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGN 459
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
+ + MYAR G++ +A F + HD++SW+++I A HG A AL F+ M P
Sbjct: 460 SCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVP 519
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG-LIDEAMN 493
++ITF+GVL+ACS+ GLVD+G Y++ M Y L P H TCVVDLLGR G L D
Sbjct: 520 NEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAF 579
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
+ N I P +W +LL +CRIH +++ G++ R+MELEP +S Y+IL MYL
Sbjct: 580 ISNSI----FHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLD 635
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
G A + MK+ GVKKEPG SWI++ G H F++GD SHP+ + L + +
Sbjct: 636 AGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSR 695
Query: 614 IER 616
IE+
Sbjct: 696 IEK 698
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 156/377 (41%), Gaps = 40/377 (10%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
++ R G + AR+L D+MP ++ ++NL+I Y G ++
Sbjct: 49 LLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLS--------------- 93
Query: 211 KQLINGLVNSRRIDAAISYFK--QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
+ L +RR + F C + + +R G A + L+ S
Sbjct: 94 ---LETLARARRAGVDVDRFSYAAALAACSRAGH------LRAGRAVHALAILDGLS-SG 143
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ +++ Y + GE+G A +VF++ RD WN ++ G EE ++ F M+
Sbjct: 144 VFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRR 203
Query: 329 SGPSPDNATFTSVLTICSDL--PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
G ++ SV+ CS T+D+ +H IK + + +AMI MYA+ G +
Sbjct: 204 GGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGAL 263
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAY------HGYAEKALELFERMRLTDFKPDDITFV 440
A F SV +++ +N++I G A +AL L+ ++ +P + TF
Sbjct: 264 VEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFS 323
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
VL AC+ AG ++ G+ KY Q + ++DL G +++
Sbjct: 324 SVLRACNLAGYLEFGKQIHG-QVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPK 382
Query: 501 DGIEVSPTVWGALLGAC 517
I W A++ C
Sbjct: 383 HDI----VTWTAMVSGC 395
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 183/448 (40%), Gaps = 38/448 (8%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLM 63
EA+ +FD +RD V+WN ++ GY + G + + +F M M F +VI
Sbjct: 162 EARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCS 221
Query: 64 -QSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ D E G ++ DV ++MI Y G + EA +F + +VV +
Sbjct: 222 GRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMF 281
Query: 118 NLVIGALVNCQRM------DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
N +I + + A + + E+ +R + + ++R + + ++
Sbjct: 282 NTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQI 341
Query: 172 PAKDVQ--------AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
+ ++ + +I Y ++GC+ F+ D+ +W +++G V +
Sbjct: 342 HGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELH 401
Query: 224 DAAISYFKQ------MPE--TCEKTWNSIISVLI-RNGLVKEAHSYLEKYPYSNIASWTN 274
+ A+S F + P+ T N+ S+ + R G ++ + K + N
Sbjct: 402 EKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAG--EQIQCFATKSGFDRFTVMGN 459
Query: 275 VIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
V Y G+V +A + F+ M + DV W+ +I ++ + L FF +M ++ P
Sbjct: 460 SCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVP 519
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIK-IARNQFTTVSNAMITMYARCGNIQSALLE 392
+ TF VLT CS +D G + + K + ++ + R G + A
Sbjct: 520 NEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAF 579
Query: 393 FSSVPIH-DIISWNSIICGLAYHGYAEK 419
S+ H D + W S++ H E+
Sbjct: 580 ISNSIFHADPVIWRSLLASCRIHRDLER 607
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 137/340 (40%), Gaps = 41/340 (12%)
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
P +++ ++ Y +G A ++ + M R+ +N++I L L+
Sbjct: 39 PAASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLA 98
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
+ + +G D ++ + L CS L GR +HA AI + VSN++++MY++CG
Sbjct: 99 RARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCG 158
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+ A F D +SWNS++ G G E+ + +F MR + V+
Sbjct: 159 EMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIK 218
Query: 445 ACS------------------YAGLVDQGRYYFDCMKNKY---------------FLQPR 471
CS AGL D + M + Y +P
Sbjct: 219 CCSGRGDGTMDIAEAVHGCVIKAGL-DSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPN 277
Query: 472 SAHYTCVVDLLGRFGLI------DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKV 525
+ ++ R + EA+ L +E+++ G++ + + ++L AC + ++
Sbjct: 278 VVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEF 337
Query: 526 G-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
G +I G+ + + + L ++Y + G ED R F
Sbjct: 338 GKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCF 377
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTV--- 58
+++ F P+ D VTW M+ G +N + A+ LF++ + D+FT ++V
Sbjct: 370 MEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNA 429
Query: 59 ---IAGLMQSDNVQ--GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+A + +Q K FD R V NS + Y +G +D A R F M D
Sbjct: 430 CASLAVARAGEQIQCFATKSGFD----RFTVMGNSCVHMYARSGDVDAATRRFQEMESHD 485
Query: 114 VVSWNLVIG--ALVNCQRMDLAESYFKEM 140
VVSW+ VI A C R L +F EM
Sbjct: 486 VVSWSAVISCHAQHGCARDAL--HFFDEM 512
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 198/627 (31%), Positives = 325/627 (51%), Gaps = 35/627 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+++AQ +FD MP+R+ V+W +I GY +NG NA+ + QM + D FT+ ++I
Sbjct: 114 LKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKA 173
Query: 62 LMQSDNV----QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
++ Q V ++ N++IS Y + LI +AL VF M +D++SW
Sbjct: 174 CSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISW 233
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----------REGRIVEARKL 167
+I A YFKEM + V + G V GR + +
Sbjct: 234 GSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSI 293
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
+ +DV A + Y G + A +F ++ DL +W +I G AI
Sbjct: 294 KFGL-GRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAI 352
Query: 228 SYFKQM------PETCEKTWNSIISVLIRNGLVKEA---HSYLEKYPYS-NIASWTNVIV 277
++F QM P+ E T S++ + + H Y+ K ++ ++
Sbjct: 353 AFFSQMRHQGLIPD--EITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLT 410
Query: 278 GYFEMGEVGSAIKVFELM-TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + E+ AI FE M D+ WN ++ +D EE + M S PD
Sbjct: 411 MYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYI 470
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T T+VL ++ ++++G Q+H A+K N T+V+N +I +YA+CG++++A F S+
Sbjct: 471 TLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSM 530
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
D++SW+S+I G A GY E+AL+LF+ MR D KP+ +TFVGVL+ACS+ GLV++G
Sbjct: 531 INPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGW 590
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
+ M+ ++ + P H +C+VDLL R G ++EA ++++ D V VW LL A
Sbjct: 591 KLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIV---VWKTLLAA 647
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
C+ H N+ VG+ A E +++++P+NS +++L +Y S G ED R+ + MK+ GV+K P
Sbjct: 648 CKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVP 707
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRL 603
G SWI++ D HVF DS HP+ +++
Sbjct: 708 GQSWIEVKDRIHVFFVEDSLHPERNKI 734
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 153/352 (43%), Gaps = 37/352 (10%)
Query: 255 KEAHSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
K+ H + L+ + ++ +++ Y + + A KVF+ M R+V W +I G +N
Sbjct: 83 KKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQN 142
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
G L+F+ QM +SG PD TF S++ CS L + LGRQ+HA +K
Sbjct: 143 GQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQ 202
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD-F 432
NA+I+MY + I AL FS + D+ISW S+I G + GY +AL F+ M +
Sbjct: 203 NALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVY 262
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID--- 489
P++ F V SACS + GR M K+ L + D+ + GL+
Sbjct: 263 LPNEFIFGSVFSACSSLLQPEYGRQLHG-MSIKFGLGRDVFAGCSLCDMYAKCGLLSCAR 321
Query: 490 ----------------------------EAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
EA+ +++R G+ +LL AC +
Sbjct: 322 VVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPS 381
Query: 522 NIKVG-EIAGE-RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
+ G ++ G M L+ + +LT MY C DA F +M+ N
Sbjct: 382 ELYQGMQVHGYINKMGLDLDVPVCNTLLT-MYAKCSELRDAIFFFEEMRCNA 432
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 1/177 (0%)
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF-VQMKESGPSPDNATFT 339
++G + +K L R N I L + L E +K F K++G +T+
Sbjct: 8 QVGFATNNVKETVLSKLRAEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYA 67
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
+++ CS L +L+ G++IH +K + T+ N ++ MY +C +++ A F ++P
Sbjct: 68 YLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPER 127
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+++SW S+I G + +G ALE + +M + PD TF ++ ACS G + GR
Sbjct: 128 NVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 184
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 190/625 (30%), Positives = 312/625 (49%), Gaps = 69/625 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++E + +FD M +++ WN M+ Y K G ++CLF M E+ + +
Sbjct: 150 LKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI-----------EG 198
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGAL 124
+ A E+FD + RDV++WNSMISGYV NGL + L ++ M + V +I L
Sbjct: 199 KRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 258
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
V C +G + G+ V + + + + N ++
Sbjct: 259 VGCAN-----------------------SGTLSLGKAVHSLAIKSSFERR-INFSNTLLD 294
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----T 240
Y G + A +F+KM +R++ SW +I G R D AI +QM + K
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVA 354
Query: 241 WNSIISVLIRNGLV---KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
SI+ R+G + K+ H Y++ SN+ ++ Y + G + +A VF M
Sbjct: 355 ITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV 414
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+D+ WN MI L PD+ T VL C+ L L+ G++
Sbjct: 415 VKDIISWNTMIGEL---------------------KPDSRTMACVLPACASLSALERGKE 453
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
IH ++ + V+NA++ +Y +CG + A L F +P D++SW +I G HGY
Sbjct: 454 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGY 513
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
+A+ F MR +PD+++F+ +L ACS++GL++QG +F MKN + ++P+ HY
Sbjct: 514 GNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYA 573
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
C+VDLL R G + +A + + I T+WGALL CR +++I++ E ERV EL
Sbjct: 574 CMVDLLSRTGNLSKAYEFIETL---PIAPDATIWGALLCGCRNYHDIELAEKVAERVFEL 630
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSG-DS 595
EP NSG Y++L +Y + E+ KR+ ++ + G++K PGCSWI+I ++F+SG +S
Sbjct: 631 EPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNS 690
Query: 596 SHPKFHRLRYLLNLLHTEIEREILF 620
SHP + LL + +++ E F
Sbjct: 691 SHPHSKNIESLLKKMRRKMKEEGHF 715
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 217/466 (46%), Gaps = 49/466 (10%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIA 60
R + A LFDK+ RD ++WN MI GY NG + + ++ QM + D+ T +V+
Sbjct: 200 RPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 259
Query: 61 GLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
G S + K V R + N+++ Y G +D ALRVF M ++VVS
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319
Query: 117 WNLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKLFDKMP 172
W +I R D A ++M G + DV + T +++ R G + + + D +
Sbjct: 320 WTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 379
Query: 173 AKDVQA----WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
A ++++ N ++ Y G + A +F M +D+ SW +I L R A +
Sbjct: 380 ANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACV- 438
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGS 287
+P + +S L R KE H Y+ + YS+ N +V Y + G +G
Sbjct: 439 ----LPAC------ASLSALERG---KEIHGYILRNGYSSDRHVANALVDLYVKCGVLGL 485
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A +F+++ ++D+ W VMI G G + G E + F +M+++G PD +F S+L CS
Sbjct: 486 ARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSH 545
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLEFSSVPIH-DI 401
L+ G + I +N F M+ + +R GN+ A ++PI D
Sbjct: 546 SGLLEQGWRF----FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDA 601
Query: 402 ISWNSIICGLA-YHGYAEKALELFERM--RLTDFKPDDITFVGVLS 444
W +++CG YH +EL E++ R+ + +P++ + +L+
Sbjct: 602 TIWGALLCGCRNYHD-----IELAEKVAERVFELEPENSGYYVLLA 642
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 140/549 (25%), Positives = 229/549 (41%), Gaps = 129/549 (23%)
Query: 24 WNVMIRGYFKNGFLDNAM---CLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
+N I + + G L+NAM C+ + E + TY++V+ G K DG +V
Sbjct: 69 YNAKILHFCQLGDLENAMELICMCKK-SELETKTYSSVL------QLCAGLKSFTDGKKV 121
Query: 81 RDVVTWNS----------MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
++ NS ++S Y G + E RVF M K+V WN ++
Sbjct: 122 HSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG-- 179
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
D ES + + IMV + R A +LFDK+ +DV +WN MI+GY+ NG
Sbjct: 180 DFKES---------ICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNG 230
Query: 191 CVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIIS 246
++++M D DL + ++ G NS +
Sbjct: 231 LTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLS---------------------- 268
Query: 247 VLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNV 305
L K HS K + +++N ++ Y + G++ A++VFE M R+V W
Sbjct: 269 ------LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH--AQAIK 363
MI G + + +K QM++ G D TS+L C+ +LD G+ +H +A
Sbjct: 323 MIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
+ N F V NA++ MYA+CG++++A FS++ + DIISWN++I
Sbjct: 383 MESNLF--VCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI--------------- 425
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQG---------------------------- 455
+ KPD T VL AC+ +++G
Sbjct: 426 ------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479
Query: 456 -------RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
R FD + +K + +T ++ G G +EA+ NE+R GIE
Sbjct: 480 CGVLGLARLLFDMIPSKDLVS-----WTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 534
Query: 509 VWGALLGAC 517
+ ++L AC
Sbjct: 535 SFISILYAC 543
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 135/357 (37%), Gaps = 98/357 (27%)
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
VT +N I + E ++ K+S + T++SVL +C+ L + G+++H+
Sbjct: 66 VTDYNAKILHFCQLGDLENAMELICMCKKS--ELETKTYSSVLQLCAGLKSFTDGKKVHS 123
Query: 360 QAIKIARNQFTTVSNAM----ITMYARCGNI----------------------------- 386
I ++ V A+ ++ YA CG++
Sbjct: 124 ----IIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 387 ----------------------QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+SA F + D+ISWNS+I G +G E+ L ++
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD-CMKNKY-----FLQPRSAHYTCV 478
++M D T + VL C+ +G + G+ +K+ + F Y+
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC 299
Query: 479 VDLLG------------------------RFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
DL G R G D A+ LL ++ +G+++ ++L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSIL 359
Query: 515 GACRIHNNIKVGEIAGERVMELEPNN--SGVYLI--LTEMYLSCGRREDAKRIFAQM 567
AC ++ G+ + + + NN S +++ L +MY CG E A +F+ M
Sbjct: 360 HACARSGSLDNGKDVHDYI---KANNMESNLFVCNALMDMYAKCGSMEAANSVFSTM 413
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 171/480 (35%), Positives = 275/480 (57%), Gaps = 39/480 (8%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM---------------- 202
G + +AR+LFD+ P +D+ +WN +I GY+ G A +LF +M
Sbjct: 174 GPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIA 233
Query: 203 ------HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
RDL ++L +G V+S + + + N+++ + I+ G ++
Sbjct: 234 AVSGCGQMRDLELGRRL-HGFVDSDGVSCTV-----------RLMNALMDMYIKCGSLEM 281
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
A S E+ + + SWT +IVG+ + G + A KVF+ M RDV WN ++ G +
Sbjct: 282 AKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQC 341
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT-TVSNA 375
+E L F +M+E+ PD T ++LT CS L L++G +H + I+ R F+ + +
Sbjct: 342 KEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVH-RYIEKHRLVFSVALGTS 400
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
+I MYA+CGNI+ A+ F +P + ++W ++ICGLA HG+A +A+E F M KPD
Sbjct: 401 LIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPD 460
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
+ITF+GVLSAC +AGLV +GR +F M+ KY L+ + HY+C++DLLGR G +DEA L+
Sbjct: 461 EITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLV 520
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
N + +E VWGA+ ACR+ NI +GE A +++E++P++SG+Y++L MY
Sbjct: 521 NTM---PMEPDAVVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEAN 577
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
R+ A ++ A M+ GV+K PGCS I++N H F+ D SH H + L+ + +I+
Sbjct: 578 MRKKADKVRAMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHMDSHAIYDCLHEITLQIK 637
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 199/441 (45%), Gaps = 64/441 (14%)
Query: 34 NGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF------DGMEVRDVVTWN 87
G +++A LF++ P RD+ ++NT+I G ++ N A E+F D + D VT
Sbjct: 173 RGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMI 232
Query: 88 SMISGYVCNGLIDEAL-RVFHGMPLKDVVS-----WNLVIGALVNCQRMDLAESYFKEMG 141
+ +SG C + D L R HG D VS N ++ + C +++A+S F+ +
Sbjct: 233 AAVSG--CGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIE 290
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
R V SWT M+ G + G + +ARK+FD+MP +DV WN ++ GY
Sbjct: 291 HRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGY--------------- 335
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLVKEA 257
V ++ A+S F +M E E T ++++ + G ++
Sbjct: 336 ----------------VQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMG 379
Query: 258 ---HSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
H Y+EK+ ++A T++I Y + G + AI +F+ + ++ W MI GL +
Sbjct: 380 MWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANH 439
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA-QAIKIARNQFTTV 372
E ++ F M E G PD TF VL+ C + GR+ + K +
Sbjct: 440 GHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKH 499
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHG---YAEKALELFERMR 428
+ MI + R G++ A +++P+ D + W +I G EKA M+
Sbjct: 500 YSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGNISLGEKA-----AMK 554
Query: 429 LTDFKPDDITFVGVLSACSYA 449
L + P D + + VL A YA
Sbjct: 555 LVEIDPSD-SGIYVLLANMYA 574
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 166/393 (42%), Gaps = 76/393 (19%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYN---TVIA-- 60
+++A+ LFD+ P RD V+WN +I GY + G A+ LF +M D T+IA
Sbjct: 176 MEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAV 235
Query: 61 ----------------GLMQSDNV--------------------QGAKEVFDGMEVRDVV 84
G + SD V + AK VF+ +E R VV
Sbjct: 236 SGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVV 295
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
+W +MI G+ GL+D+A +VF MP +DV WN ++ V C++ A S F EM
Sbjct: 296 SWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEAS 355
Query: 145 VASWTI-MVN--------GLVREG----RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
V I MVN G + G R +E +L V +I Y G
Sbjct: 356 VVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRL-----VFSVALGTSLIDMYAKCGN 410
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISV 247
+ A +F+++ +++ +W +I GL N + AI +F+ M E +K T+ ++S
Sbjct: 411 IEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSA 470
Query: 248 LIRNGLVKEAHSYLE----KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT----RD 299
GLVKE + KY + ++ +G G + +L+ T D
Sbjct: 471 CCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDL--LGRAGHLDEAEQLVNTMPMEPD 528
Query: 300 VTVWNVMIFGL---GENDLGEEGLKFFVQMKES 329
VW + F G LGE+ V++ S
Sbjct: 529 AVVWGAIFFACRMQGNISLGEKAAMKLVEIDPS 561
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 111/264 (42%), Gaps = 45/264 (17%)
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEG--------LKFFVQMKESGPS-PDNATFTSVL 342
L+++ + +N I L +D G+ L + + SG + PD+ TF +L
Sbjct: 73 LALLSSLPASAYNAAIRALSLSDDGDRHGHGVVRRCLPLYRALLRSGTARPDHLTFPFLL 132
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
C+ L G A +++ + V NA + G ++ A F P+ D++
Sbjct: 133 KACARLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRDLV 192
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTD--FKPDDITFVGVLSACSYAGLVDQGR---- 456
SWN++I G G +ALELF RM D +PD++T + +S C ++ GR
Sbjct: 193 SWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHG 252
Query: 457 -------------------YYFDC----MKNKYF--LQPRS-AHYTCVVDLLGRFGLIDE 490
Y C M F ++ R+ +T ++ +FGL+D+
Sbjct: 253 FVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDD 312
Query: 491 AMNLLNEIRADGIEVSPTVWGALL 514
A + +E+ +V P W AL+
Sbjct: 313 ARKVFDEMPER--DVFP--WNALM 332
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 195/573 (34%), Positives = 292/573 (50%), Gaps = 42/573 (7%)
Query: 53 FTYNTVIA--------GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALR 104
F YN +A GL Q + A+ +FD V WN++ GY N E +
Sbjct: 53 FQYNGYVAPNVVTSWVGLKQMAH---ARHLFDHFPDPKVELWNAISRGYFHNAFYREVVF 109
Query: 105 VFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEA 164
+F M DV NC L ++GA EG +
Sbjct: 110 LFGKMKSMDVRP---------NCFTFPLVLKSCAKIGA-------------FVEGEEIHC 147
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
+ + A L I Y +G A LF M +R++ +W +I+G + R+
Sbjct: 148 EVIKGGLEGNQFVATTL-IDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVA 206
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE 284
A F PE WN ++S I G +K A + PY + SW ++ GY G+
Sbjct: 207 LARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGD 266
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG-PSPDNATFTSVLT 343
V + ++FE M R+V WN +I G N E L+ F +M G P++AT +VL+
Sbjct: 267 VEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLS 326
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
C+ L LDLG+ +H A I V NA+I MY++CG I++A+ F S+ + D+I+
Sbjct: 327 ACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLIT 386
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
WNS+ICGLA HG AL LF +M++ KPD ITF+GVL +C++ GLV++G YF+ M
Sbjct: 387 WNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMV 446
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
N+Y + P+ HY C+VDL GR GL+D A+ + + +E +W ALLGACRI+ NI
Sbjct: 447 NEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMP---MEADAVIWAALLGACRIYKNI 503
Query: 524 KVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQI 583
+ E+A ++++ LEP N Y++L+ +Y GR +D R+ M++ G KK PGCS I++
Sbjct: 504 DLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEV 563
Query: 584 NDGGHVFLSGDSSHPK----FHRLRYLLNLLHT 612
ND F S D H + + L+ L+ LL +
Sbjct: 564 NDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRS 596
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 145/524 (27%), Positives = 235/524 (44%), Gaps = 60/524 (11%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIA 60
++ A++LFD P WN + RGYF N F + LF +M D+ FT+ V+
Sbjct: 72 QMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLK 131
Query: 61 GLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+ +E+ G+E V ++I Y I A ++F GM +++V
Sbjct: 132 SCAKIGAFVEGEEIHCEVIKGGLEGNQFVA-TTLIDVYSGGRAIGSAYKLFVGMLERNIV 190
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
+W +I + C R+ LA F RDV W IMV+G + G + ARKLFD MP +D
Sbjct: 191 AWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRD 250
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-- 233
+WN M+ GY +NG V E LF++M +R++ SW LI G ++ + FK+M
Sbjct: 251 TMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLI 310
Query: 234 -----PETCEKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGE 284
P + T +++S R G L K H Y + N ++ Y + G
Sbjct: 311 DGLVVPN--DATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGL 368
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+ +A++VFE M +D+ WN MI GL + G + L F QMK +G PD TF VL
Sbjct: 369 IENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCS 428
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
C+ L ++ G T+ N+M+ E+S P I +
Sbjct: 429 CTHLGLVEEG---------------TSYFNSMVN-------------EYSIAP--QIEHY 458
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
++ G ++A+E +RM + + D + + +L AC +D ++
Sbjct: 459 GCMVDLFGRAGLLDRAIEFVKRMPM---EADAVIWAALLGACRIYKNIDLAEL---ALQK 512
Query: 465 KYFLQPRS-AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
L+P++ A+Y + ++ G G + L +R G + P
Sbjct: 513 LIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLP 556
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 13/231 (5%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F S+L C T+ L +++ AQ I V+ ++T + + A F P
Sbjct: 28 FISLLRSCK---TVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 84
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ WN+I G ++ + + + LF +M+ D +P+ TF VL +C+ G +G
Sbjct: 85 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGE- 143
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
C K L+ T ++D+ I A L + +E + W +++
Sbjct: 144 EIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGM----LERNIVAWTSMISGY 199
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGV-YLILTEMYLSCGRREDAKRIFAQM 567
+ N + + R+ +L P V + I+ Y+ G + A+++F M
Sbjct: 200 ILCNRVAL----ARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTM 246
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 269/473 (56%), Gaps = 11/473 (2%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
+++ LV G ++ ARKLFD+ +D+ +WN +I GY+ G A DL+ KM + ++
Sbjct: 196 IIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPD 255
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKT--------WNSIISVLIRNGLVKEAHSYLE 262
+ + G+V++ ++ +++ ++ E+ N+++ + I+ ++ A E
Sbjct: 256 EVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFE 315
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ SWT +++GY + G + SA+++F M +DV +WN +I G + +E L
Sbjct: 316 NMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALAL 375
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F +M+ S +PD T + L+ CS L LD+G +H K + A++ MYA+
Sbjct: 376 FHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAK 435
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CGNI+ A+ F +P + ++W +IICGLA HG A+ F M PD+ITF+GV
Sbjct: 436 CGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGV 495
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
LSAC + GLVDQGR YF M +KY + P+ HY+C+VDLLGR G ++EA L IR+
Sbjct: 496 LSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEEL---IRSMP 552
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
E VWGAL RIH N+ +GE A +++EL+P++ G+Y++L MY E A++
Sbjct: 553 FEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARK 612
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+ M+E GV+K PGCS I++N + F+ D SHP+ ++ L L +IE
Sbjct: 613 VRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIE 665
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 188/400 (47%), Gaps = 25/400 (6%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+ D+F +N +I L+ + A+++FD VRD+V+WNS+I+GYV GL DEA +++
Sbjct: 187 DSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYK 246
Query: 109 MP----LKDVVSWNLVIGALVNCQRMDLAESY---FKEMGAR-DVASWTIMVNGLVREGR 160
M + D V+ V+ A + + L +EMG V +++ ++
Sbjct: 247 MGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKN 306
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
I A+ LF+ M K V +W M+ GY G + A LF +M ++D+ W LI G V +
Sbjct: 307 IEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQA 366
Query: 221 RRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLVKEA---HSYLEKYPYS-NIASW 272
+R A++ F +M + + T + +S + G + H Y++K+ + N+A
Sbjct: 367 KRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALG 426
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T ++ Y + G + AI+VFE M R+ W +I GL + + +F +M G
Sbjct: 427 TALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLV 486
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAI-KIARNQFTTVSNAMITMYARCGNIQSALL 391
PD TF VL+ C +D GR Q K + + ++ + R G ++ A
Sbjct: 487 PDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEE 546
Query: 392 EFSSVPIH-DIISWNSIICGLAYHG-------YAEKALEL 423
S+P D + W ++ G HG A K LEL
Sbjct: 547 LIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLEL 586
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 155/371 (41%), Gaps = 83/371 (22%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSD-- 66
A+ LFD+ RD V+WN +I GY + G D A L+ +M E ++ + G++ +
Sbjct: 209 ARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQ 268
Query: 67 -------------------------------------NVQGAKEVFDGMEVRDVVTWNSM 89
N++ AK +F+ M + VV+W +M
Sbjct: 269 LENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTM 328
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
+ GY GL++ A+R+F+ MP KDVV WN +IG V +R A + F EM A VA
Sbjct: 329 VIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDK 388
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAW--------NL---------MIAGYLDNGCV 192
I V V ++ A DV W NL ++ Y G +
Sbjct: 389 ITV---------VNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNI 439
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIIS 246
A +F++M R+ +W +I GL + AAISYF +M P+ E T+ ++S
Sbjct: 440 KKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPD--EITFIGVLS 497
Query: 247 VLIRNGLVKEAHSYL----EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT----R 298
GLV + Y KY S + +V +G G + EL+ +
Sbjct: 498 ACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDL--LGRAGFLEEAEELIRSMPFEP 555
Query: 299 DVTVWNVMIFG 309
D VW + FG
Sbjct: 556 DAVVWGALFFG 566
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 156/345 (45%), Gaps = 50/345 (14%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I+ A+ LF+ M ++ V+W M+ GY K G L++A+ LFN+MPE+D+ +N +I G +Q+
Sbjct: 307 IEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQA 366
Query: 66 DNVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ A +F M+ V +T + +S G +D + + H + K ++ N+ +
Sbjct: 367 KRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVD-KHNLTMNVAL 425
Query: 122 G-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
G ALV+ C + A F+EM R+ +WT ++ GL G+ A F +M + +
Sbjct: 426 GTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGL 485
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
+ G L C G GLV+ R YF QM
Sbjct: 486 VPDEITFIGVLSACCHG----------------------GLVDQGR-----DYFYQMTSK 518
Query: 237 CE-----KTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNV-----IVGYFEMGEV 285
K ++ ++ +L R G ++EA + P+ + W + I G MGE
Sbjct: 519 YGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGE- 577
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
+A K+ EL D ++ ++ G+ ++ E+ K M+E G
Sbjct: 578 RAASKLLEL-DPHDGGIYVLLANMYGDANMWEQARKVRKMMEERG 621
>gi|5803274|dbj|BAA83584.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|55296350|dbj|BAD68395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596022|gb|EAZ35802.1| hypothetical protein OsJ_20095 [Oryza sativa Japonica Group]
Length = 763
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 177/589 (30%), Positives = 310/589 (52%), Gaps = 15/589 (2%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
N R+ A+ FD+MP R+ V+W MI+G+F +D A LF MP ++ ++ +I G
Sbjct: 180 NHRVGYARKAFDRMPVRNVVSWTAMIKGHFTAHEVDMAFQLFKLMPVKNSVSWCVMIGGF 239
Query: 63 MQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ + A E+F+ G EV +V+ +++ + I R HG+ +K ++
Sbjct: 240 VTHEKFSEAVELFNSLMMNGEEVTNVILVK-IVNAFAGMKSIRGG-RCIHGLAVKSGFAY 297
Query: 118 NLVIGA---LVNCQRMDLAESY--FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
+LV+ A L+ C+ +D+ E+ F +M V SW M+ G + +I EARKLFD M
Sbjct: 298 DLVLEASLVLMYCKSLDITEARLEFDKMEGNHVGSWNAMLCGYIYSDKIDEARKLFDSMN 357
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+D +WN MI GY+++G + A +L+ KM ++ L + L++ +++ +D A F
Sbjct: 358 NRDKISWNSMINGYINDGRIADATELYSKMTEKSLEAATALMSWFIDNGMLDKARDMFYN 417
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
MP+ + +++ ++ G + +A + ++ +I G F G++ A K+F
Sbjct: 418 MPQIDVMSCTTLLFGYVKGGHMDDALDLFHMMQKRTVVTYNVMISGLFHQGKITEAYKLF 477
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
TRD W+ ++ GL N L E L+F+ +M S P + +S+++ S+ +
Sbjct: 478 NESPTRDSVTWSCLVAGLATNGLIHEALQFYKKMLLSNIRPSESVVSSLISCLSNYSMMV 537
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
G+Q HA IKI + + N++I++Y +CG + A F + D ++WN+II G A
Sbjct: 538 HGQQFHATTIKIGLDSHLLIQNSLISLYCKCGEMIIAQSIFDLMAKRDKVTWNTIIHGYA 597
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
+ + A+E+FE M PDDITF+GVLSAC++ L+++ +Y+F+ M Y + P
Sbjct: 598 LNNLGQNAVEMFESMTKAQVDPDDITFLGVLSACNHMSLLEEAKYFFNAMTCTYGILPNI 657
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
HY C+VDL R +I EA L +++ E +W +LL CR+ N K+ E A +
Sbjct: 658 MHYACMVDLFCRKCMIKEAEGL---VKSMPFEPDSAIWTSLLSGCRLTGNDKLAEHAASQ 714
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
++ ++P YL L ++ + + +Q+K +K+ G SWI
Sbjct: 715 LIAIDPCTKMPYLHLISVHGLTNKSTVIDSLRSQIKSTATEKDVGYSWI 763
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 218/510 (42%), Gaps = 82/510 (16%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR--- 81
N ++ + + G L+ A +F+ MP RD+ ++NT++A +Q+ + V +E+R
Sbjct: 39 NRLMAEHLRAGRLEAAREVFDGMPRRDVVSWNTIMA--VQARAGSHGRAVGAFLEMRRQG 96
Query: 82 ---DVVTWNSMISGYVCNGLIDEAL---RVFHGMPLKDVVSWNLVIGA-----LVNCQRM 130
D ++++ +S C L EAL R HG+ K S N+ +GA NC +
Sbjct: 97 FRPDHTSFSTALSA--CARL--EALEMGRCVHGLVFKSCSSGNVFVGASLITMYANCGVV 152
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
E + + +VA W +++GLV R+ ARK FD+MP ++V +W MI G+
Sbjct: 153 SCLEQVLDGVESPNVALWNALISGLVMNHRVGYARKAFDRMPVRNVVSWTAMIKGHFTAH 212
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII----- 245
V +A LF+ M ++ SW +I G V + A+ F + E+ N I+
Sbjct: 213 EVDMAFQLFKLMPVKNSVSWCVMIGGFVTHEKFSEAVELFNSLMMNGEEVTNVILVKIVN 272
Query: 246 ---------------SVLIRNGL-------------------VKEAHSYLEKYPYSNIAS 271
+ +++G + EA +K +++ S
Sbjct: 273 AFAGMKSIRGGRCIHGLAVKSGFAYDLVLEASLVLMYCKSLDITEARLEFDKMEGNHVGS 332
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
W ++ GY ++ A K+F+ M RD WN MI G + + + + +M E
Sbjct: 333 WNAMLCGYIYSDKIDEARKLFDSMNNRDKISWNSMINGYINDGRIADATELYSKMTEKSL 392
Query: 332 SP---------DNATFTSVLTICSDLPTLDL-------------GRQIHAQAIKIARNQF 369
DN + ++P +D+ G A + +
Sbjct: 393 EAATALMSWFIDNGMLDKARDMFYNMPQIDVMSCTTLLFGYVKGGHMDDALDLFHMMQKR 452
Query: 370 TTVS-NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
T V+ N MI+ G I A F+ P D ++W+ ++ GLA +G +AL+ +++M
Sbjct: 453 TVVTYNVMISGLFHQGKITEAYKLFNESPTRDSVTWSCLVAGLATNGLIHEALQFYKKML 512
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
L++ +P + ++S S ++ G+ +
Sbjct: 513 LSNIRPSESVVSSLISCLSNYSMMVHGQQF 542
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 15/241 (6%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ G + +A +VF+ M RDV WN ++ + F++M+ G PD+ +F
Sbjct: 45 HLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAVGAFLEMRRQGFRPDHTSF 104
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
++ L+ C+ L L++GR +H K + V ++ITMYA CG + V
Sbjct: 105 STALSACARLEALEMGRCVHGLVFKSCSSGNVFVGASLITMYANCGVVSCLEQVLDGVES 164
Query: 399 HDIISWNSIICGLAYH---GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
++ WN++I GL + GYA KA F+RM + + +++ ++ A VD
Sbjct: 165 PNVALWNALISGLVMNHRVGYARKA---FDRMPVRNV----VSWTAMIKGHFTAHEVDMA 217
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
F M K S + ++ EA+ L N + +G EV+ + ++
Sbjct: 218 FQLFKLMPVK-----NSVSWCVMIGGFVTHEKFSEAVELFNSLMMNGEEVTNVILVKIVN 272
Query: 516 A 516
A
Sbjct: 273 A 273
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+N ++ + R G +++A F +P D++SWN+I+ A G +A+ F MR F
Sbjct: 38 NNRLMAEHLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAVGAFLEMRRQGF 97
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY---TCVVDLLGRFGLID 489
+PD +F LSAC+ ++ GR C+ F S + ++ + G++
Sbjct: 98 RPDHTSFSTALSACARLEALEMGR----CVHGLVFKSCSSGNVFVGASLITMYANCGVVS 153
Query: 490 EAMNLLNEIRADGIEVSPTV--WGALLGACRIHNNIKVGEIAGERV 533
+L DG+E SP V W AL+ +++ + A +R+
Sbjct: 154 CLEQVL-----DGVE-SPNVALWNALISGLVMNHRVGYARKAFDRM 193
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 189/625 (30%), Positives = 312/625 (49%), Gaps = 69/625 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++E + +FD M +++ WN M+ Y K G ++CLF M E+ + +
Sbjct: 150 LKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI-----------EG 198
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGAL 124
+ A E+FD + RDV++WNSMISGYV NGL + L ++ M + V +I L
Sbjct: 199 KRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 258
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
V C +G + G+ V + + + + N ++
Sbjct: 259 VGCAN-----------------------SGTLSLGKAVHSLAIKSSFERR-INFSNTLLD 294
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----T 240
Y G + A +F+KM +R++ SW +I G R D AI +QM + K
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVA 354
Query: 241 WNSIISVLIRNGLV---KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
SI+ R+G + K+ H Y++ SN+ ++ Y + G + +A VF M
Sbjct: 355 ITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV 414
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+D+ WN MI L PD+ T VL C+ L L+ G++
Sbjct: 415 VKDIISWNTMIGEL---------------------KPDSRTMACVLPACASLSALERGKE 453
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
IH ++ + V+NA++ +Y +CG + A L F +P D++SW +I G HGY
Sbjct: 454 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGY 513
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
+A+ F MR +PD+++F+ +L ACS++GL++QG +F MKN + ++P+ HY
Sbjct: 514 GNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYA 573
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
C+VDLL R G + +A + + I T+WGALL CR +++I++ E ERV EL
Sbjct: 574 CMVDLLSRTGNLSKAYEFMETLP---IAPDATIWGALLCGCRNYHDIELAEKVAERVFEL 630
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSG-DS 595
EP N+G Y++L +Y + E+ KR+ ++ + G++K PGCSWI+I ++F+SG +S
Sbjct: 631 EPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNS 690
Query: 596 SHPKFHRLRYLLNLLHTEIEREILF 620
SHP + LL + +++ E F
Sbjct: 691 SHPHSKNIESLLKKMRRKMKEEGHF 715
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 217/466 (46%), Gaps = 49/466 (10%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIA 60
R + A LFDK+ RD ++WN MI GY NG + + ++ QM + D+ T +V+
Sbjct: 200 RPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 259
Query: 61 GLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
G S + K V R + N+++ Y G +D ALRVF M ++VVS
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319
Query: 117 WNLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKLFDKMP 172
W +I R D A ++M G + DV + T +++ R G + + + D +
Sbjct: 320 WTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 379
Query: 173 AKDVQA----WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
A ++++ N ++ Y G + A +F M +D+ SW +I L R A +
Sbjct: 380 ANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACV- 438
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGS 287
+P + +S L R KE H Y+ + YS+ N +V Y + G +G
Sbjct: 439 ----LPAC------ASLSALERG---KEIHGYILRNGYSSDRHVANALVDLYVKCGVLGL 485
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A +F+++ ++D+ W VMI G G + G E + F +M+++G PD +F S+L CS
Sbjct: 486 ARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSH 545
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLEFSSVPIH-DI 401
L+ G + I +N F M+ + +R GN+ A ++PI D
Sbjct: 546 SGLLEQGWRF----FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDA 601
Query: 402 ISWNSIICGLA-YHGYAEKALELFERM--RLTDFKPDDITFVGVLS 444
W +++CG YH +EL E++ R+ + +P++ + +L+
Sbjct: 602 TIWGALLCGCRNYHD-----IELAEKVAERVFELEPENTGYYVLLA 642
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 141/548 (25%), Positives = 227/548 (41%), Gaps = 127/548 (23%)
Query: 24 WNVMIRGYFKNGFLDNAMCLFN--QMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
+N I + + G L+NAM L Q E + TY +V+ G K DG +V
Sbjct: 69 YNAKILHFCQLGDLENAMELICMCQKSELETKTYGSVL------QLCAGLKSFTDGKKVH 122
Query: 82 DVVTWNS----------MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMD 131
++ NS ++S Y G + E RVF M K+V WN ++ D
Sbjct: 123 SIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG--D 180
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
ES + + IMV + R A +LFDK+ +DV +WN MI+GY+ NG
Sbjct: 181 FKES---------ICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGL 231
Query: 192 VGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
++++M D DL + ++ G NS +
Sbjct: 232 TERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLS----------------------- 268
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVM 306
L K HS K + +++N ++ Y + G++ A++VFE M R+V W M
Sbjct: 269 -----LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH--AQAIKI 364
I G + + +K QM++ G D TS+L C+ +LD G+ +H +A +
Sbjct: 324 IAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 383
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
N F V NA++ MYA+CG++++A FS++ + DIISWN++I
Sbjct: 384 ESNLF--VCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI---------------- 425
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQG----------------------------- 455
+ KPD T VL AC+ +++G
Sbjct: 426 -----GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC 480
Query: 456 ------RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
R FD + +K + +T ++ G G +EA+ NE+R GIE
Sbjct: 481 GVLGLARLLFDMIPSKDLVS-----WTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVS 535
Query: 510 WGALLGAC 517
+ ++L AC
Sbjct: 536 FISILYAC 543
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 201/629 (31%), Positives = 331/629 (52%), Gaps = 39/629 (6%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIA 60
I + +F+ + + WN+MIR Y + A L+ M D +TY +I
Sbjct: 27 HIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQ 86
Query: 61 GLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGY-VCNGLIDEALRVFHGMPLKDV 114
+ AK+V + G + DV N++I+ + VC+ + D A RVF+ + D
Sbjct: 87 ACSIRRSEWEAKQVHNHVLKLGFD-SDVYVRNTLINCFSVCSNMTD-ACRVFNESSVLDS 144
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
VSWN ++ + ++ A+ + +M R + + M+ G +VEA KLFD+M K
Sbjct: 145 VSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEK 204
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHD-----------RDLTSWKQLINGLVNSRRI 223
D+ W+ +IA + N A F MH L++ L+ +VN ++
Sbjct: 205 DMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLL--VVNMGKL 262
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMG 283
++S K E+ N++I + + G + A ++ ++ SW ++I GY +
Sbjct: 263 IHSLS-LKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCN 321
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
V +A +F+ M +DV W+ MI G +NDL +E L F +M+ SG PD T SV++
Sbjct: 322 LVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVIS 381
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMYARCGNIQSALLEFSSVPIHD 400
C+ L L+ G+ +HA I RN T + +I MY +CG +++AL F +
Sbjct: 382 ACARLAALEQGKWVHAY---IKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKG 438
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
I +WN++I GLA +G E +L++F M+ P++ITF+GVL AC + GLVD+G+++F
Sbjct: 439 ISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFY 498
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV--WGALLGACR 518
M + + +QP HY C+VDLLGR G + EA LLN + ++P V WGALLGAC+
Sbjct: 499 SMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNR-----MPMTPDVATWGALLGACK 553
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
H + ++G G +++EL+P++ G +++L+ +Y S G+ +D I M ++ V K PGC
Sbjct: 554 KHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGC 613
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
S I+ N H FL+GD +HP + +L
Sbjct: 614 SMIEANGVIHEFLAGDKTHPDMDAIEDML 642
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 234/466 (50%), Gaps = 34/466 (7%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+ + +A +F++ D+V+WN ++ GY + G ++ A +++QMPER + N++I
Sbjct: 127 SNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFG 186
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-PLKDVVSWNLVIG 122
V A ++FD M +D+VTW+++I+ + N + +EA+R F GM + +V + +
Sbjct: 187 MRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVS 246
Query: 123 ALVNCQRM------DLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMP 172
AL C + L S ++G S+ + N L+ + G I+ ARKLFD+
Sbjct: 247 ALSACANLLVVNMGKLIHSLSLKIGTE---SYINLQNALIYMYSKCGDIMVARKLFDEAY 303
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
D+ +WN MI+GYL V A+ +F M ++D+ SW +I+G + D ++ F++
Sbjct: 304 LLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQE 363
Query: 233 MPETC----EKTWNSIISVLIRNGLVKEA---HSYLEKYPYS-NIASWTNVIVGYFEMGE 284
M + E T S+IS R +++ H+Y+++ + N+ T +I Y + G
Sbjct: 364 MQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGC 423
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
V +A++VF M + ++ WN +I GL N L E L F MK+ +P+ TF VL
Sbjct: 424 VETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGA 483
Query: 345 CSDLPTLDLGRQ-----IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
C + +D G+ IH I+ + M+ + R G +Q A + +P+
Sbjct: 484 CRHMGLVDEGQHHFYSMIHDHKIQPNVKHY----GCMVDLLGRAGKLQEAEELLNRMPMT 539
Query: 400 -DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
D+ +W +++ HG +E + +L + +PD F +LS
Sbjct: 540 PDVATWGALLGACKKHGDSEMGRRVGR--KLIELQPDHDGFHVLLS 583
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 203/661 (30%), Positives = 345/661 (52%), Gaps = 77/661 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
+ +A LFD+MP R+TV++ +I+GY + A+ LF+++ E + F ++TV+
Sbjct: 95 LPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKL 154
Query: 62 LMQSD-----------------------------------NVQGAKEVFDGMEVRDVVTW 86
L+ ++ + A++VFD +E +D+V+W
Sbjct: 155 LVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSW 214
Query: 87 NSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESY----FK 138
M++ YV N +E+L++F M + + ++ V+ A V + ++ ++ FK
Sbjct: 215 TGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFK 274
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
++ +++ ++ G + +A ++F++MP DV W+ MIA Y + A ++
Sbjct: 275 TSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEM 334
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
F +M GLV + A + + C + L+ L + H
Sbjct: 335 FCRMR-----------RGLVLPNQFTLA-----SLLQAC--------ASLVDLQLGNQIH 370
Query: 259 SYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVF-ELMTTRDVTVWNVMIFGLGENDLG 316
++ K +N ++ Y + G + +++++F E DV+ WN +I G + G
Sbjct: 371 CHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVS-WNTVIVGYVQAGNG 429
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
E+ L F M E T++SVL C+ + L+ G QIH+ ++K ++ T V NA+
Sbjct: 430 EKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNAL 489
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
I MYA+CGNI+ A L F + HD +SWN++I G + HG +AL+ FE M T+ KPD
Sbjct: 490 IDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDK 549
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
+TFVG+LSACS AGL+D+G+ YF M +Y ++P + HYTC+V LLGR G +D+A L++
Sbjct: 550 VTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVH 609
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
EI E S VW ALL AC IHN++++G I+ +RV+E+EP + +++L+ +Y + R
Sbjct: 610 EI---PFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARR 666
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+ I MK G++KEPG SWI+ H F GD+SHP + +L L+ +
Sbjct: 667 WGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARN 726
Query: 617 E 617
E
Sbjct: 727 E 727
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 203/468 (43%), Gaps = 53/468 (11%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAK----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRD 206
++ +R G + L ++ K D+ A N+++ Y+ + A LF +M DR+
Sbjct: 50 LLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRN 109
Query: 207 LTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIRNGLVK---EAHS 259
S+ LI G R AI F ++ E +++++ +L+ K H+
Sbjct: 110 TVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHA 169
Query: 260 YLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
+ K + S+ T +I Y G A +VF+ + +D+ W M+ EN+ EE
Sbjct: 170 CVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEE 229
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
LK F +M+ G P+N TF SVL C L ++G+ +H A K + + V +I
Sbjct: 230 SLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELID 289
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
+Y + G++ AL F +P D+I W+ +I A +E+A+E+F RMR P+ T
Sbjct: 290 LYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFT 349
Query: 439 FVGVLSACSYAGLVD-QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN- 496
+L AC A LVD Q C K L ++D+ + G ++ ++ L +
Sbjct: 350 LASLLQAC--ASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSE 407
Query: 497 ---------------------------------EIRADGIEVSPTVWGALLGACRIHNNI 523
E + G EV+ + ++L AC +
Sbjct: 408 SPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVT---YSSVLRACAGIAAL 464
Query: 524 KVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
+ G +I V + N+ V L +MY CG +DA+ +F ++E+
Sbjct: 465 EPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREH 512
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 153/364 (42%), Gaps = 65/364 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+++ + +A +F++MP+ D + W+ MI Y ++ + A+ +F +M + +A
Sbjct: 292 IKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLA 351
Query: 61 GLMQS---------DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
L+Q+ N V G+++ +V N+++ Y G ++ +L++F P
Sbjct: 352 SLLQACASLVDLQLGNQIHCHVVKVGLDM-NVFVSNALMDMYAKCGRMENSLQLFSESPN 410
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE------------- 158
VSWN VI V + A FK+M V + + ++R
Sbjct: 411 CTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQI 470
Query: 159 --------------------------GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
G I +AR +FD + D +WN MI+GY +G
Sbjct: 471 HSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLY 530
Query: 193 GVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNS 243
G A F+ M + D ++ +++ N+ +D +YFK M E C + +
Sbjct: 531 GEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTC 590
Query: 244 IISVLIRNGLVKEAHSYLEKYPYS-NIASW-----TNVIVGYFEMGEVGSAIKVFELMTT 297
++ +L R+G + +A + + P+ ++ W VI E+G + SA +V E+
Sbjct: 591 MVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRI-SAQRVLEIEPE 649
Query: 298 RDVT 301
+ T
Sbjct: 650 DEAT 653
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 205/663 (30%), Positives = 331/663 (49%), Gaps = 93/663 (14%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ K+G +++A LF++MP++D +++NT+I+ + + A+E+FDG + +
Sbjct: 69 NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 128
Query: 85 TWNSMISGYVCNGLIDEALRVF----------------------------------HGMP 110
TW+S+ISGY G EA +F HG
Sbjct: 129 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 188
Query: 111 LKDVVSWNL-VIGALVN----CQRMDLAESYFK--EMGARDVASWTIMVNGLVREGRIVE 163
+K+ N+ V+ LV+ C+ + AE FK E ++ WT MV G + G +
Sbjct: 189 VKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYK 248
Query: 164 ARKLFDKMPAKDVQA---------------------------------------WNLMIA 184
A + F M A+ V+ + ++
Sbjct: 249 AVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVD 308
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----T 240
Y G + A+++ + M D D+ SW L+ G V + A+ FK M K T
Sbjct: 309 MYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYT 368
Query: 241 WNSIISVLIRNGL-VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTR 298
+ S+++ + + K H + K + N +N +V Y + G++ A VFE M +
Sbjct: 369 FPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEK 428
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
DV W ++ G +N+ EE LK F M+ +G +PD S+L+ C++L L+ G+Q+H
Sbjct: 429 DVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVH 488
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
IK +V N+++ MYA+CG + A F S+ + D+I+W +II G A +G
Sbjct: 489 LDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGR 548
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
+L+ ++ M + +PD ITF+G+L ACS+AGLVD+GR YF M Y ++P HY C+
Sbjct: 549 NSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACM 608
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSP--TVWGALLGACRIHNNIKVGEIAGERVMEL 536
+DL GR G +DEA LL D ++V P TVW +LL ACR+H N+++ E A + EL
Sbjct: 609 IDLFGRSGKLDEAKQLL-----DQMDVKPDATVWKSLLSACRVHENLELAERAATNLFEL 663
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSS 596
EP N+ Y++L+ MY + + D +I MK G+ KEPGCSW++IN + F+S D
Sbjct: 664 EPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRG 723
Query: 597 HPK 599
HP+
Sbjct: 724 HPR 726
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 195/573 (34%), Positives = 292/573 (50%), Gaps = 42/573 (7%)
Query: 53 FTYNTVIA--------GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALR 104
F YN +A GL Q + A+ +FD V WN++ GY N E +
Sbjct: 95 FQYNGYVAPNVVTSWVGLKQ---MAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVF 151
Query: 105 VFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEA 164
+F M DV NC L ++GA EG +
Sbjct: 152 LFGKMKSMDVRP---------NCFTFPLVLKSCAKIGA-------------FVEGEEIHC 189
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
+ + A L I Y +G A LF M +R++ +W +I+G + R+
Sbjct: 190 EVIKGGLEGNQFVATTL-IDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVA 248
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE 284
A F PE WN ++S I G +K A + PY + SW ++ GY G+
Sbjct: 249 LARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGD 308
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG-PSPDNATFTSVLT 343
V + ++FE M R+V WN +I G N E L+ F +M G P++AT +VL+
Sbjct: 309 VEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLS 368
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
C+ L LDLG+ +H A I V NA+I MY++CG I++A+ F S+ + D+I+
Sbjct: 369 ACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLIT 428
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
WNS+ICGLA HG AL LF +M++ KPD ITF+GVL +C++ GLV++G YF+ M
Sbjct: 429 WNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMV 488
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
N+Y + P+ HY C+VDL GR GL+D A+ + + +E +W ALLGACRI+ NI
Sbjct: 489 NEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMP---MEADAVIWAALLGACRIYKNI 545
Query: 524 KVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQI 583
+ E+A ++++ LEP N Y++L+ +Y GR +D R+ M++ G KK PGCS I++
Sbjct: 546 DLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEV 605
Query: 584 NDGGHVFLSGDSSHPK----FHRLRYLLNLLHT 612
ND F S D H + + L+ L+ LL +
Sbjct: 606 NDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRS 638
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 145/524 (27%), Positives = 235/524 (44%), Gaps = 60/524 (11%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIA 60
++ A++LFD P WN + RGYF N F + LF +M D+ FT+ V+
Sbjct: 114 QMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLK 173
Query: 61 GLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+ +E+ G+E V ++I Y I A ++F GM +++V
Sbjct: 174 SCAKIGAFVEGEEIHCEVIKGGLEGNQFVA-TTLIDVYSGGRAIGSAYKLFVGMLERNIV 232
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
+W +I + C R+ LA F RDV W IMV+G + G + ARKLFD MP +D
Sbjct: 233 AWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRD 292
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-- 233
+WN M+ GY +NG V E LF++M +R++ SW LI G ++ + FK+M
Sbjct: 293 TMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLI 352
Query: 234 -----PETCEKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGE 284
P + T +++S R G L K H Y + N ++ Y + G
Sbjct: 353 DGLVVPN--DATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGL 410
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+ +A++VFE M +D+ WN MI GL + G + L F QMK +G PD TF VL
Sbjct: 411 IENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCS 470
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
C+ L ++ G T+ N+M+ E+S P I +
Sbjct: 471 CTHLGLVEEG---------------TSYFNSMVN-------------EYSIAP--QIEHY 500
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
++ G ++A+E +RM + + D + + +L AC +D ++
Sbjct: 501 GCMVDLFGRAGLLDRAIEFVKRMPM---EADAVIWAALLGACRIYKNIDLAEL---ALQK 554
Query: 465 KYFLQPRS-AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
L+P++ A+Y + ++ G G + L +R G + P
Sbjct: 555 LIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLP 598
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 13/231 (5%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F S+L C T+ L +++ AQ I V+ ++T + + A F P
Sbjct: 70 FISLLRSCK---TVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 126
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ WN+I G ++ + + + LF +M+ D +P+ TF VL +C+ G +G
Sbjct: 127 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGE- 185
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
C K L+ T ++D+ I A L + +E + W +++
Sbjct: 186 EIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGM----LERNIVAWTSMISGY 241
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGV-YLILTEMYLSCGRREDAKRIFAQM 567
+ N + + R+ +L P V + I+ Y+ G + A+++F M
Sbjct: 242 ILCNRVAL----ARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTM 288
>gi|255542982|ref|XP_002512554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548515|gb|EEF50006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 160/434 (36%), Positives = 252/434 (58%), Gaps = 6/434 (1%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
++ N I + + G ++ A +F+++P + + ++N ++AG Q+ + A ++F+ M
Sbjct: 16 SAISSNSQISHFARIGQINRARKIFDELPYKTIISWNAIVAGYFQNKQPREAHDLFNKMP 75
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKE 139
R+ V+WN +ISGYV NG+I+EA VF MP ++VVSW ++ + + AES F E
Sbjct: 76 DRNTVSWNGLISGYVKNGMINEAREVFDKMPERNVVSWTAMVRGYIQEGMIKQAESLFWE 135
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
M ++V SWT+M+ GL+ +GR+ EA KL+D MP KDV A MI G G + A ++F
Sbjct: 136 MPEKNVVSWTVMLGGLIEDGRVNEAIKLYDLMPLKDVVARTNMIGGLCMEGRLSEAREIF 195
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
+M R++ +W +I+G + ++D A F+ MP+ E TW +++ R+G +KEA
Sbjct: 196 DEMPKRNVVAWTTMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLMGYTRSGRIKEAAE 255
Query: 260 YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
E P + + +I+G+ + GEVG A F+ M +D W+ MI L E
Sbjct: 256 LFEAMPMKPVPACNEMIIGFGQSGEVGKAKWTFDQMREKDDGTWSAMIKVYERKGLELEA 315
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF---TTVSNAM 376
L F M+ G P+ + S+L++C L +LD GRQ+H Q + R+QF VS+ +
Sbjct: 316 LDLFRLMQREGVRPNFPSIISILSVCGSLASLDYGRQVHTQ---LVRSQFDFDVYVSSVL 372
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
ITMY +CG++ A F + D + WNSII G A HG E+ALE+F M + PD+
Sbjct: 373 ITMYIKCGDLVKAKRVFDRFSMKDTVMWNSIITGYAQHGLGEEALEVFFEMLSSGISPDE 432
Query: 437 ITFVGVLSACSYAG 450
ITF+GVL+ACSY+G
Sbjct: 433 ITFIGVLTACSYSG 446
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 198/354 (55%), Gaps = 8/354 (2%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N I EA+ +FDKMP+R+ V+W M+RGY + G + A LF +MPE+++ ++ ++
Sbjct: 90 VKNGMINEAREVFDKMPERNVVSWTAMVRGYIQEGMIKQAESLFWEMPEKNVVSWTVMLG 149
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
GL++ V A +++D M ++DVV +MI G G + EA +F MP ++VV+W +
Sbjct: 150 GLIEDGRVNEAIKLYDLMPLKDVVARTNMIGGLCMEGRLSEAREIFDEMPKRNVVAWTTM 209
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I ++D+A F+ M ++ +WT M+ G R GRI EA +LF+ MP K V A N
Sbjct: 210 ISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLMGYTRSGRIKEAAELFEAMPMKPVPACN 269
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEK 239
MI G+ +G VG A+ F +M ++D +W +I A+ F+ M E
Sbjct: 270 EMIIGFGQSGEVGKAKWTFDQMREKDDGTWSAMIKVYERKGLELEALDLFRLMQREGVRP 329
Query: 240 TWNSIISVLIRNGLV------KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVF 292
+ SIIS+L G + ++ H+ L + + ++ + +I Y + G++ A +VF
Sbjct: 330 NFPSIISILSVCGSLASLDYGRQVHTQLVRSQFDFDVYVSSVLITMYIKCGDLVKAKRVF 389
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
+ + +D +WN +I G ++ LGEE L+ F +M SG SPD TF VLT CS
Sbjct: 390 DRFSMKDTVMWNSIITGYAQHGLGEEALEVFFEMLSSGISPDEITFIGVLTACS 443
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 190/414 (45%), Gaps = 49/414 (11%)
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
++ R G+I ARK+FD++P K + +WN ++AGY N A DLF KM DR+ SW
Sbjct: 24 ISHFARIGQINRARKIFDELPYKTIISWNAIVAGYFQNKQPREAHDLFNKMPDRNTVSWN 83
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
LI+G V + I+ A F +MPE +W +++ I+ G++K+A S + P N+ S
Sbjct: 84 GLISGYVKNGMINEAREVFDKMPERNVVSWTAMVRGYIQEGMIKQAESLFWEMPEKNVVS 143
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
WT ++ G E G V AIK+++LM +DV MI GL E + F +M P
Sbjct: 144 WTVMLGGLIEDGRVNEAIKLYDLMPLKDVVARTNMIGGLCMEGRLSEAREIFDEM----P 199
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
+ +T+ MI+ YA + A
Sbjct: 200 KRNVVAWTT-----------------------------------MISGYAMNNKVDVARK 224
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F +P + ++W +++ G G ++A ELFE M + + +G +G
Sbjct: 225 LFEVMPDKNEVTWTAMLMGYTRSGRIKEAAELFEAMPMKPVPACNEMIIGF----GQSGE 280
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
V + ++ FD M+ K ++ ++ + R GL EA++L ++ +G+ +
Sbjct: 281 VGKAKWTFDQMREK-----DDGTWSAMIKVYERKGLELEALDLFRLMQREGVRPNFPSII 335
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIF 564
++L C ++ G +++ + + + V +L MY+ CG AKR+F
Sbjct: 336 SILSVCGSLASLDYGRQVHTQLVRSQFDFDVYVSSVLITMYIKCGDLVKAKRVF 389
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 193/654 (29%), Positives = 318/654 (48%), Gaps = 62/654 (9%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D VT + ++ Y K L++++ +F+++P+++ +++ IAG +Q+D + ++F M+
Sbjct: 191 DVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQ 250
Query: 80 VRDVVTWNSMISGYV--CNGLIDEALRV-FHGMPLK-----DVVSWNLVIGALVNCQRMD 131
+ + S + C GL L H LK DV+ + C M
Sbjct: 251 RKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMS 310
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD--- 188
A F + ++ S+ M+ G R + +A KLF ++ + ++G L
Sbjct: 311 DAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAA 370
Query: 189 ----------------------NGCVG--------------VAEDLFQKMHDRDLTSWKQ 212
N CV A LF +M RD SW
Sbjct: 371 VIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNA 430
Query: 213 LINGLVNSRRIDAAISYFKQM----PETCEKTWNSIISVL-----IRNGLVKEAHSYLEK 263
+I + +S+F M E E T+ S++ NG+ E H + K
Sbjct: 431 IITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGM--EVHGRIIK 488
Query: 264 YPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ + ++ Y + G + A K+ + + + WN +I G E+ +F
Sbjct: 489 SGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRF 548
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F M E G PDN T+ +VL C++L T+ LG+QIHAQ IK+ +++ ++ MY++
Sbjct: 549 FSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSK 608
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CGN+ +LL F P D ++WN++ICG AYHG E+ALELFE M + KP+ TFV V
Sbjct: 609 CGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSV 668
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
L ACS+ G +G +YF M + Y L+P+ HY+C+VD+LGR G ++EA+ L+ ++
Sbjct: 669 LRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMP--- 725
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
E +W LL C+I N++V E A +++L+P +S Y +L+ +Y G + +
Sbjct: 726 FEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSK 785
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
I M+ + +KKEPGCSWI++ D H FL D +HPK + LL+LL ++ R
Sbjct: 786 IRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRR 839
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 148/654 (22%), Positives = 273/654 (41%), Gaps = 96/654 (14%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-DMFTYNTVIAGLMQ 64
++ A +F++MPQRD V+WN M+ G G ++ A +FN MP D+ ++N++I+G +Q
Sbjct: 75 LEYAYKVFEEMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQ 134
Query: 65 SDNVQGAKEVFDGMEVRDV-VTWNSM---ISGYVCNGLIDEALRV-FHGMPLK-----DV 114
+ ++Q + VF +++RD+ V ++ +S +C+ L D+ L + HG+ ++ DV
Sbjct: 135 NGDIQKSIAVF--LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDV 192
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
V+ + ++ C ++ + F E+ ++ SW+ + G V+ +++ KLF +M K
Sbjct: 193 VTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRK 252
Query: 175 DVQAWNLMIAGYLDNGCVGV---------------------------------------- 194
+ A C G+
Sbjct: 253 GIGVSQSTYASVF-RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSD 311
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A LF + D +L S+ +I G + + A F Q+ + +S + V
Sbjct: 312 AYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAV 371
Query: 255 KEAHS--------YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVM 306
+ HS ++ SNI ++ Y + G + A +F+ M RD WN +
Sbjct: 372 IKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAI 431
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
I +N+ + L F M S PD T+ SVL C+ G ++H + IK
Sbjct: 432 ITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGM 491
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
V +A++ MY++CG ++ A + ++SWN+II G + +E + F
Sbjct: 492 GLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSH 551
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGR-----------------------YYFDC-- 461
M +PD+ T+ VL C+ V G+ Y C
Sbjct: 552 MLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGN 611
Query: 462 MKNKYFL---QPR--SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
M + + P+ S + ++ GL +EA+ L + + I+ + + ++L A
Sbjct: 612 MHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRA 671
Query: 517 CRIHNNIKVGEIAGER---VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
C N K G ++ + LEP Y + ++ G+ E+A R+ M
Sbjct: 672 CSHVGNAKKGLFYFQKMASIYALEPQLEH-YSCMVDILGRSGQVEEALRLIQDM 724
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 143/590 (24%), Positives = 268/590 (45%), Gaps = 83/590 (14%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR-DV 83
N +I+ Y K L+ A +F +MP+RD+ ++NT++ G + ++ A+ VF+ M DV
Sbjct: 63 NCLIQMYVKCCALEYAYKVFEEMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDV 122
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDV--------VSWNLVIGALVNCQRMDLA-E 134
V+WNS+ISGY+ NG I +++ VF + ++D+ ++ +L I +L+ Q + +
Sbjct: 123 VSWNSLISGYLQNGDIQKSIAVF--LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIH 180
Query: 135 SYFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+MG DV + + +V+ + + ++ +F ++P K+ +W+ IAG + N +
Sbjct: 181 GIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLL 240
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
LF++M + I + S + + +C + L + L
Sbjct: 241 RGLKLFKEMQRKG----------------IGVSQSTYASVFRSC--------AGLSASRL 276
Query: 254 VKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+ H + K + S++ T + Y + + A K+F L+ ++ +N MI G
Sbjct: 277 GTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYAR 336
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N+ G + K F+Q++++ S D + + L+ + + G Q+H AIK + V
Sbjct: 337 NEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICV 396
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+NA++ MY +CG + A F + I D +SWN+II + K L F M +
Sbjct: 397 ANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKM 456
Query: 433 KPDDITFVGVLSACS-----YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
+PD+ T+ VL AC+ G+ GR M K F+ + +VD+ + G+
Sbjct: 457 EPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVG------SALVDMYSKCGM 510
Query: 488 IDEAMNL--------------------LNEIRAD-----------GIEVSPTVWGALLGA 516
++EA + L + D G+E + +L
Sbjct: 511 MEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDT 570
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIF 564
C + +G+ ++++LE S VY+ L +MY CG D+ +F
Sbjct: 571 CANLATVGLGKQIHAQMIKLEL-LSDVYITSTLVDMYSKCGNMHDSLLMF 619
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 203/459 (44%), Gaps = 64/459 (13%)
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM-HDRDLTSWKQLINGLVNSRR 222
A K+F++MP +D+ +WN M+ G G + +A+ +F M H D+ SW LI+G + +
Sbjct: 78 AYKVFEEMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGD 137
Query: 223 IDAAISYFKQMPE---------------TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS 267
I +I+ F +M + C + ++ + I V+ Y
Sbjct: 138 IQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDY------- 190
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
++ + + ++ Y + + ++ VF + ++ W+ I G +ND GLK F +M+
Sbjct: 191 DVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQ 250
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
G +T+ SV C+ L LG Q+H A+K V A + MYA+C N+
Sbjct: 251 RKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMS 310
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
A FS +P H++ S+N++I G A + +A +LF +++ F D+++ G LSA +
Sbjct: 311 DAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAA 370
Query: 448 YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
+G + K L ++D+ G+ G + EA L +E+ P
Sbjct: 371 VIKGHSEG-LQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIR----DP 425
Query: 508 TVWGALLGACR---------------IHNNIKVGEI---------AGERV----MELEPN 539
W A++ AC + + ++ E AG+R ME+
Sbjct: 426 VSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGR 485
Query: 540 --NSGVYL------ILTEMYLSCGRREDAKRIFAQMKEN 570
SG+ L L +MY CG E+A++I +++E
Sbjct: 486 IIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQ 524
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
TF+ + CS+ L G++ HA I V+N +I MY +C ++ A F +
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERM 427
P DI+SWN+++ G A G E A +F M
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSM 116
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 168/520 (32%), Positives = 276/520 (53%), Gaps = 32/520 (6%)
Query: 97 GLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV 156
G +AL F MP +D +++ +I AL A VA + + +V
Sbjct: 112 GAPRDALAAFSAMPRRDSFTYSFLIKAL----------------SAAGVAPVRAVHSHVV 155
Query: 157 REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
+ G + +D N +I Y NG A +F +M +RD+ SW +
Sbjct: 156 KLGSV------------EDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAA 203
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVI 276
+V + F +MPE +WN+I+ + G V+ A ++ P N+ SW+ ++
Sbjct: 204 MVREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMV 263
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
GY + G++ A +F+ M ++++ W +M+ + L +E K F QMKE+ D A
Sbjct: 264 SGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVA 323
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
S+L C++ +L LG++IH K + T V NA+I M+ +CG + A F +
Sbjct: 324 AVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTE 383
Query: 397 PIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+ D +SWNSII G A HG+ +KALELF +M+ F PD +T + VLSAC++ G VD+G
Sbjct: 384 TVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEG 443
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
R +F M+ Y + P+ HY C++DLLGR GLI EA++L+ + + EV +WG+LL
Sbjct: 444 RRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEV---IWGSLLS 500
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
ACR+H N++ EIA + +L+P+N+G Y +L+ +Y G+ D + QMK G +K
Sbjct: 501 ACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKT 560
Query: 576 PGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
G SW+++N+ H F GD H ++ +++ L + ++
Sbjct: 561 AGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLSSHVK 600
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 203/429 (47%), Gaps = 26/429 (6%)
Query: 35 GFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM----EVRDVVTWNSMI 90
G +A+ F+ MP RD FTY+ +I L + V + V + V D N++I
Sbjct: 112 GAPRDALAAFSAMPRRDSFTYSFLIKAL-SAAGVAPVRAVHSHVVKLGSVEDTFVGNALI 170
Query: 91 SGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTI 150
Y NG +A +VF MP +DVVSWN + A+V + F EM +D SW
Sbjct: 171 DAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNT 230
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
+++G + G + A +LF +MP ++V +W+ M++GY G + +A +F KM ++L +W
Sbjct: 231 ILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTW 290
Query: 211 KQLINGLVNSRRIDAAISYFKQMPE-TCEKTWNSIISVLIRNG------LVKEAHSYLEK 263
+++ +D A F QM E + E +++S+L L K H Y+ K
Sbjct: 291 TIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRK 350
Query: 264 YPYSNIASWTNVIVGYF-EMGEVGSAIKVFELMTT-RDVTVWNVMIFGLGENDLGEEGLK 321
N ++ F + G V A VF+ T +D WN +I G + G++ L+
Sbjct: 351 RNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALE 410
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITM 379
F QMK+ G +PD T +VL+ C+ + +D GR+ H ++ + + MI +
Sbjct: 411 LFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRR-HFSNMERDYGIMPQIEHYGCMIDL 469
Query: 380 YARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHG---YAEKALELFERMRLTDFKPD 435
R G I+ A+ S+P + + W S++ H YAE A+ L+ +P
Sbjct: 470 LGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVN-----ELSKLQPS 524
Query: 436 DITFVGVLS 444
+ VLS
Sbjct: 525 NAGNYAVLS 533
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 123/243 (50%), Gaps = 9/243 (3%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N +A+ +FD+MP+RD V+WN + + G L LF++MPE+D ++NT++ G
Sbjct: 175 KNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDG 234
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
++ V+ A E+F M R+VV+W++M+SGY G ++ A +F MP K++V+W +++
Sbjct: 235 YTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMV 294
Query: 122 GALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLF----DKMPA 173
A +D A F +M DVA+ ++ G + +++ +
Sbjct: 295 SACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLG 354
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQ-KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+ N +I + GCV A+ +F + +D SW +I G D A+ F Q
Sbjct: 355 RSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQ 414
Query: 233 MPE 235
M +
Sbjct: 415 MKQ 417
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 148/286 (51%), Gaps = 22/286 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + + LFD+MP++DTV+WN ++ GY K G ++ A LF +MPER++ +++T+++
Sbjct: 205 VREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVS 264
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVS 116
G + +++ A+ +FD M +++VTW M+S GL+DEA ++F M DV +
Sbjct: 265 GYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAA 324
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFD-KM 171
++ A + L + + + R++ T + N L+ + G + A +FD +
Sbjct: 325 VVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTET 384
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAI 227
KD +WN +I G+ +G A +LF +M + D + +++ + +D
Sbjct: 385 VQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGR 444
Query: 228 SYFKQ-------MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
+F MP+ + + +I +L R GL+KEA ++ P+
Sbjct: 445 RHFSNMERDYGIMPQI--EHYGCMIDLLGRGGLIKEAVDLIKSMPW 488
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 196/666 (29%), Positives = 328/666 (49%), Gaps = 87/666 (13%)
Query: 6 IQEAQNLFDKMPQRDTV-TWNVMIRGYFKNGFLDNAMCLFNQMPERDMF----------- 53
++E + +FD + + V WN+M+ Y K G ++ LF +M + +
Sbjct: 502 LREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILK 561
Query: 54 ------------------------TYNTVIAGLM----QSDNVQGAKEVFDGMEVRDVVT 85
+YNTV+ L+ +S V A ++FD + RDVV+
Sbjct: 562 CFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVS 621
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
WNSMISG V NG AL F M + D+ + + A N + L + + G
Sbjct: 622 WNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQ-G 680
Query: 142 ARDVASWTIMVNGLVRE-----GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
+ S +M N + + G + +A + F+KM K V +W +IA Y+ G A
Sbjct: 681 VKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAI 740
Query: 197 DLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
LF +M + D+ S +++ +D
Sbjct: 741 RLFYEMESKGVSPDVYSMTSVLHACACGNSLDKG-------------------------- 774
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
++ H+Y+ K + +N ++ Y + G + A VF + +D+ WN MI G
Sbjct: 775 --RDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYS 832
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+N L E LK F +M++ PD T +L C L L++GR IH ++ +
Sbjct: 833 KNSLPNEALKLFAEMQKE-SRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELH 891
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
V+NA+I MY +CG++ A L F +P D+I+W +I G HG +A+ F++MR+
Sbjct: 892 VANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAG 951
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
KPD+ITF +L ACS++GL+++G +F+ M ++ ++P+ HY C+VDLL R G + +A
Sbjct: 952 IKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKA 1011
Query: 492 MNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMY 551
NL+ + I+ T+WGALL CRIH+++++ E E V ELEP+N+G Y++L +Y
Sbjct: 1012 YNLIETMP---IKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIY 1068
Query: 552 LSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLH 611
+ E+ K++ ++ + G+KK PGCSWI++ F+S D++HP+ + LLN L
Sbjct: 1069 AEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLR 1128
Query: 612 TEIERE 617
+++ E
Sbjct: 1129 IKMKNE 1134
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 211/493 (42%), Gaps = 77/493 (15%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------- 48
++ + A LFD++ RD V+WN MI G NGF +A+ F QM
Sbjct: 600 KSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVN 659
Query: 49 --------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
R++ NT++ + N+ A + F+ M +
Sbjct: 660 SVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKT 719
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFK 138
VV+W S+I+ YV GL D+A+R+F+ M K DV S V+ A +D
Sbjct: 720 VVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHN 779
Query: 139 EMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ ++A + N L+ + G + EA +F ++P KD+ +WN MI GY N
Sbjct: 780 YIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNE 839
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A LF +M R D I+ +P S+ ++ I G+
Sbjct: 840 ALKLFAEMQKES---------------RPD-GITMACLLP-----ACGSLAALEIGRGI- 877
Query: 255 KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
H + + YS+ N ++ Y + G + A +F+++ +D+ W VMI G G +
Sbjct: 878 ---HGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMH 934
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
LG E + F +M+ +G PD TFTS+L CS L+ G I +
Sbjct: 935 GLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEH 994
Query: 374 NA-MITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTD 431
A M+ + AR GN+ A ++PI D W +++CG H E A ++ E + +
Sbjct: 995 YACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAE--HVFE 1052
Query: 432 FKPDDITFVGVLS 444
+PD+ + +L+
Sbjct: 1053 LEPDNAGYYVLLA 1065
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 80/188 (42%), Gaps = 12/188 (6%)
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D ++S+L +C++ L G+ +H+ + ++ MY CG ++ F
Sbjct: 450 DLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIF 509
Query: 394 SSV-PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
+ + + WN ++ A G +++ LF++M+ + TF +L + G V
Sbjct: 510 DHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRV 569
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRF---GLIDEAMNLLNEIRADGIEVSPTV 509
+ + C+ F ++ T V L+ + G +D A L +E+ D VS
Sbjct: 570 GECKRIHGCVYKLGF----GSYNTVVNSLIATYFKSGEVDSAHKLFDEL-GDRDVVS--- 621
Query: 510 WGALLGAC 517
W +++ C
Sbjct: 622 WNSMISGC 629
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 213/739 (28%), Positives = 352/739 (47%), Gaps = 135/739 (18%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIR-----GYFKNGFLDNAMCLFNQMPER-DMFTY- 55
N+ ++A ++FDKM ++ +W ++R G F GF+ L + + E+ D F +
Sbjct: 79 NSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFP 138
Query: 56 ----------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVR 81
N +I + ++ AK+V +GM +
Sbjct: 139 VVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQK 198
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD----VVSWNLVIGALV-NCQRMDLAESY 136
D V+WNS+I+ V NG++ EAL + M L + VV+W+ VIG N ++ E +
Sbjct: 199 DCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELF 258
Query: 137 FKEMGA------RDVAS---------W--------------TIMVNGLV---------RE 158
+ +GA R +AS W + NG V R
Sbjct: 259 ARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRC 318
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLI 214
G + A K+F K K ++N MI GYL+NG VG A++LF +M +RD SW +I
Sbjct: 319 GDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMI 378
Query: 215 NGLVNSRRIDAAISYFKQM------PE--------------TCEKTWNSIISVLIRNGL- 253
+G V++ D A+ F+ + P+ TC + I S+ I GL
Sbjct: 379 SGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQ 438
Query: 254 ------------------VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
+ A ++ + ++W +I GY ++G ++ E M
Sbjct: 439 SNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERM 498
Query: 296 TT----RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
+ +V WN ++ GL EN + ++ F +M+ S PD T +L CS L T+
Sbjct: 499 KSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATI 558
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
G+Q+HA +I+ + + ++ MYA+CG+I+ ++ + +++ N+++
Sbjct: 559 HRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAY 618
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
A HG+ E+ + +F RM + +PD +TF+ VLS+C +AG + G F M+ Y + P
Sbjct: 619 AMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMET-YNITPT 677
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
HYTC+VDLL R G +DEA L+ + +E W ALLG C IH + +GEIA E
Sbjct: 678 LKHYTCMVDLLSRAGKLDEAYQLIKNMP---MEADSVTWSALLGGCFIHKEVALGEIAAE 734
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
+++ELEP+N+G Y++L +Y S GR D + M + G++K PGCSWI+ DG H+FL
Sbjct: 735 KLIELEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFL 794
Query: 592 SGDSSHPKFHRLRYLLNLL 610
+ D SH + + ++L+ L
Sbjct: 795 ASDKSHQRVEEIYFMLDNL 813
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 130/568 (22%), Positives = 225/568 (39%), Gaps = 125/568 (22%)
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKE-----MGAR 143
++ Y N ++A +F M LK++ SW V+ +N F+E +G +
Sbjct: 72 LLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEK 131
Query: 144 -DVASWTIMVN---------------GLV--------------------REGRIVEARKL 167
D + +++N G+V + G + EA+K+
Sbjct: 132 LDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKV 191
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM----HDRDLTSWKQLINGLVNSRRI 223
+ M KD +WN +I + NG V A DL + M + ++ +W +I G ++
Sbjct: 192 LEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYD 251
Query: 224 DAAISYFKQM----------------PETCEKTW-----------------------NSI 244
++ F +M P W N++
Sbjct: 252 VESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANAL 311
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM----TTRDV 300
+ + R G +K A K+ AS+ +IVGY E G VG A ++F M RD
Sbjct: 312 VGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDR 371
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
WN MI G +N + ++ L F + G PD+ T S+LT +D+ + G++IH+
Sbjct: 372 ISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSI 431
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
AI + V A++ MY +C +I +A + F + D +WN++I G A K
Sbjct: 432 AIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKI 491
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
EL ERM+ F+P+ T+ +L AGLV+ +Y
Sbjct: 492 RELVERMKSDGFEPNVYTWNSIL-----AGLVENKQY----------------------- 523
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPN 539
D AM L NE++ + G +L AC I G ++ + +
Sbjct: 524 --------DLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDS 575
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQM 567
++ + L +MY CG + +++ ++
Sbjct: 576 DAHIGATLVDMYAKCGSIKHCYQVYNKI 603
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 21/213 (9%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T T+ TI +L LG+Q+H+ +IK V ++ MY+ + + A F +
Sbjct: 33 TSTTYSTILQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKM 92
Query: 397 PIHDIISWNSII-----CGLAYHGYAEKALELFERMRLTDF--KPDDITFVGVLSACSYA 449
+ ++ SW +++ GL Y G+ LFE K D F VL+ C
Sbjct: 93 TLKNLHSWTAVLRLHLNMGLFYKGFM-----LFEEFLCDGLGEKLDFFVFPVVLNICCGL 147
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
G ++ GR + F+ ++D+ G+ G +DEA +L +G+ V
Sbjct: 148 GDLELGRQVHGMVLKHGFVTNVYVG-NALIDMYGKCGSLDEAKKVL-----EGMTQKDCV 201
Query: 510 -WGALLGACRIHNNIKVGEIAGERVM--ELEPN 539
W +++ AC + + E ++ ELEPN
Sbjct: 202 SWNSIITACVANGVVYEALDLLENMLLSELEPN 234
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 254/454 (55%), Gaps = 11/454 (2%)
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
AR+LFD++P ++ WN M GY + ++F +M +R++ +W +ING + S +
Sbjct: 4 ARQLFDQIPDPNIALWNSMFRGYAQSESY---REIFCEMFERNVVAWTSMINGYILSADL 60
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMG 283
+A F PE WN ++S I G + EA + P ++ W V+ GY G
Sbjct: 61 VSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNG 120
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVL 342
V + +FE M R++ WN +I G N L E L F +M ES P++AT +VL
Sbjct: 121 NVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVL 180
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
+ C+ L LDLG+ +H A V NA++ MYA+CG I++A+ F + D+I
Sbjct: 181 SACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLI 240
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
SWN++I GLA H AL LF +M+ KPD ITF+G+L AC++ GLV+ G YF M
Sbjct: 241 SWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSM 300
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
+ Y + P+ HY C+VD+L R G +++AM +R +E +W LLGACRI+ N
Sbjct: 301 ADDYLIMPQIEHYGCMVDMLARAGRLEQAMAF---VRKMPVEADGVIWAGLLGACRIYKN 357
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
+++ E+A +R++ELEP N Y++L+ +Y GR ED R+ M++ G KK PGCS I+
Sbjct: 358 VELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIE 417
Query: 583 INDGGHVFLSGDSSHPKFHR----LRYLLNLLHT 612
+ND F S D HP+ LR L+ +L +
Sbjct: 418 VNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRS 451
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 188/410 (45%), Gaps = 57/410 (13%)
Query: 43 LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEA 102
LF+Q+P+ ++ +N++ G QS++ +E+F M R+VV W SMI+GY+ + + A
Sbjct: 7 LFDQIPDPNIALWNSMFRGYAQSESY---REIFCEMFERNVVAWTSMINGYILSADLVSA 63
Query: 103 LRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIV 162
R+F DLA RDV W IMV+G + G +V
Sbjct: 64 RRLF------------------------DLAPE-------RDVVLWNIMVSGYIEGGDMV 92
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
EARKLF +MP +DV WN ++ GY NG V E LF++M +R++ SW LI G ++
Sbjct: 93 EARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGL 152
Query: 223 IDAAISYFKQMPETC-----EKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTN 274
+ FK+M + T +++S R G L K H Y E N
Sbjct: 153 FFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKG-----N 207
Query: 275 VIVG------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
V VG Y + G + +AI VF M T+D+ WN +I GL + G + L F QMK
Sbjct: 208 VYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKN 267
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
+G PD TF +L C+ + ++ G + A M+ M AR G ++
Sbjct: 268 AGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLE 327
Query: 388 SALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
A+ +P+ D + W ++ A Y L RL + +P +
Sbjct: 328 QAMAFVRKMPVEADGVIWAGLLG--ACRIYKNVELAELALQRLIELEPKN 375
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 47/299 (15%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ LFD++P + WN M RGY ++ ++ +F +M ER++ + ++I G + S ++
Sbjct: 4 ARQLFDQIPDPNIALWNSMFRGYAQS---ESYREIFCEMFERNVVAWTSMINGYILSADL 60
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQ 128
A+ +FD RDVV WN M+SGY+ G + EA ++FH MP +DV+ WN V+
Sbjct: 61 VSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNG 120
Query: 129 RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM----------------- 171
++ E F+EM R++ SW ++ G G E F +M
Sbjct: 121 NVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVL 180
Query: 172 ------PAKDVQAW-----------------NLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
A D+ W N ++ Y G + A +F+ M +DL
Sbjct: 181 SACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLI 240
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEK 263
SW LI GL R A++ F QM +K T+ I+ GLV++ +Y +
Sbjct: 241 SWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQS 299
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 194/597 (32%), Positives = 316/597 (52%), Gaps = 54/597 (9%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGM---EVRDVVTWNSMISGYVCNGLIDEALRVFH 107
++F N V++ + ++ A +FD + ++D+V+WNS++S Y+ + AL +FH
Sbjct: 293 NVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFH 352
Query: 108 GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTI-------------MVNG 154
M + ++S +++ +LVN + S + R V ++I +V+
Sbjct: 353 KMTTRHLMSPDVI--SLVNI--LPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDM 408
Query: 155 LVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSW 210
+ G++ EA K+F +M KDV +WN M+ GY G + A LF++M + D+ +W
Sbjct: 409 YAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTW 468
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEK 263
+I G + A+ F+QM + + T S++S + G + KE H Y K
Sbjct: 469 TAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIK 528
Query: 264 Y--------PYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTT--RDVTVWNVMIFGLGE 312
+ P ++ N ++ Y + A K+F+ ++ RDV W VMI G +
Sbjct: 529 FILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQ 588
Query: 313 NDLGEEGLKFFVQMKESGPS--PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+ L+ F M + S P++ T + L C+ L L GRQ+HA + RN +
Sbjct: 589 HGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVL---RNFYG 645
Query: 371 TV----SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+V +N +I MY++ G++ +A + F ++P + +SW S++ G HG E AL +F+
Sbjct: 646 SVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDE 705
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
MR PD ITF+ VL ACS++G+VD G +F+ M + + P HY C+VDL GR G
Sbjct: 706 MRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAG 765
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
+ EAM L+NE+ +E +P VW ALL ACR+H+N+++GE A R++ELE N G Y +
Sbjct: 766 RLGEAMKLINEM---PMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTL 822
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL 603
L+ +Y + R +D RI MK G+KK PGCSWIQ G F GD SHP+ ++
Sbjct: 823 LSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQI 879
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 203/493 (41%), Gaps = 82/493 (16%)
Query: 6 IQEAQNLFDKMPQR---DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTV---- 58
++ A N+FD + R D V+WN ++ Y + A+ LF++M R + + + +
Sbjct: 310 LRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVN 369
Query: 59 -------IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+A ++ V G + G+ V DV N+++ Y G ++EA +VF M
Sbjct: 370 ILPACASLAASLRGRQVHGF-SIRSGL-VDDVFVGNAVVDMYAKCGKMEEANKVFQRMKF 427
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKL 167
KDVVSWN ++ R++ A S F+ M DV +WT ++ G + G+ EA +
Sbjct: 428 KDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDV 487
Query: 168 FDKM-----------------------------------------------PAKDVQAWN 180
F +M A D++ N
Sbjct: 488 FRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVIN 547
Query: 181 LMIAGYLDNGCVGVAEDLFQKM--HDRDLTSWKQLINGLVNSRRIDAAISYFK---QMPE 235
+I Y VA +F + DRD+ +W +I G + A+ F +M +
Sbjct: 548 GLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDK 607
Query: 236 TCEKTWNSIISVLIRNGLV------KEAHSYLEKYPYSNIASW-TNVIVG-YFEMGEVGS 287
+ + ++ L+ + ++ H+Y+ + Y ++ + N ++ Y + G+V +
Sbjct: 608 SIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDT 667
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A VF+ M R+ W ++ G G + GE+ L+ F +M++ PD TF VL CS
Sbjct: 668 AQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSH 727
Query: 348 LPTLDLGRQIHAQAIK-IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI-ISWN 405
+D G + K + M+ ++ R G + A+ + +P+ + W
Sbjct: 728 SGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWV 787
Query: 406 SIICGLAYHGYAE 418
+++ H E
Sbjct: 788 ALLSACRLHSNVE 800
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 141/319 (44%), Gaps = 34/319 (10%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTV--WNVMIFGLGENDLGEEGLKFFVQMKESG 330
TN+I Y AI + E + +V WN +I + + QMK G
Sbjct: 195 TNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLG 254
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMYARCGNIQ 387
+PD+ TF V C++L +L LG +HA ++R+ F + V NA+++MY +CG ++
Sbjct: 255 WTPDHYTFPFVFKACANLSSLSLGASLHA---TVSRSGFASNVFVCNAVVSMYGKCGALR 311
Query: 388 SALLEFSSV---PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF-KPDDITFVGVL 443
A F + I D++SWNS++ + A AL LF +M PD I+ V +L
Sbjct: 312 HAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNIL 371
Query: 444 SACSYAGLVDQGRYYF-----DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
AC+ +GR + + F+ VVD+ + G ++EA + +
Sbjct: 372 PACASLAASLRGRQVHGFSIRSGLVDDVFVG------NAVVDMYAKCGKMEEANKVFQRM 425
Query: 499 RADGIEVSPTVWGALLG----ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
+ + W A++ A R+ + + + E E +EL+ + + Y
Sbjct: 426 KFKDV----VSWNAMVTGYSQAGRLEHALSLFERMTEENIELD---VVTWTAVITGYAQR 478
Query: 555 GRREDAKRIFAQMKENGVK 573
G+ +A +F QM + G +
Sbjct: 479 GQGCEALDVFRQMCDCGSR 497
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNT 57
++ + AQ +FD MPQR+ V+W ++ GY +G ++A+ +F++M + D T+
Sbjct: 661 KSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLV 720
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVT-----WNSMISGYVCNGLIDEALRVFHGMPLK 112
V+ S V F+ M V + M+ + G + EA+++ + MP++
Sbjct: 721 VLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPME 780
Query: 113 DV-VSWNLVIGAL---VNCQRMDLAESYFKEMGARDVASWTIMVN 153
V W ++ A N + + A + E+ + + S+T++ N
Sbjct: 781 PTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSN 825
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 197/646 (30%), Positives = 317/646 (49%), Gaps = 86/646 (13%)
Query: 16 MPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------------------------- 50
MP+++ V W ++ GY +NG + A+ +F M E
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 51 --------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN 96
D + + +I + ++ AKEVFD M+ DVV + S+IS + N
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120
Query: 97 GLIDEALRVFHGMPLKDVVSWN--LVIGALVNCQRM---DLAESYFKEMGARD--VASWT 149
G + A M LK + N + L C R+ + K++G R V S T
Sbjct: 121 GEFELAAEALIQM-LKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSST 179
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+++ R G A+ +FD + K+V +W M+ Y+ +G + A +F M +
Sbjct: 180 ALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDP 239
Query: 210 WK---QLINGLVNSRRIDAAI--SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
+ ++ G S + + S K T + N+++S+ R GLV+E + L K
Sbjct: 240 NEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKI 299
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
++ SWT I F+ N GE+ +
Sbjct: 300 ENPDLVSWTTAISANFQ-------------------------------NGFGEKAIALLC 328
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
QM G +P+ F+SVL+ C+D+ +LD G Q H A+K+ + NA+I MY++CG
Sbjct: 329 QMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCG 388
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+ SA L F + HD+ SWNS+I G A HG A KALE+F +MR KPDD TF+GVL
Sbjct: 389 QMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLM 448
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
C+++G+V++G +F M ++Y P +HY C++D+LGR G DEA+ ++N++ E
Sbjct: 449 GCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMP---FE 505
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+W LL +C++H N+ +G++A +R+MEL +S Y++++ +Y G EDA+++
Sbjct: 506 PDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVR 565
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
+M E GVKK+ GCSWI+IN+ H F S D SHP + +L L
Sbjct: 566 RRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGEL 611
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 192/456 (42%), Gaps = 34/456 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
R + A+ +FD+M D V + +I + +NG + A QM ++ + T T
Sbjct: 88 RCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTT 147
Query: 58 VIAGLMQ--SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
++ + + G G+ + V + ++I Y NG A VF + K+VV
Sbjct: 148 ILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVV 207
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDV------ASWTIMVNGLVREGRIVEARKLFD 169
SW ++ + R++ A F +M + V S + G + GR + +
Sbjct: 208 SWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKH 267
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+ D++ N +++ Y G V E + K+ + DL SW I+ + + AI+
Sbjct: 268 DL-ITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIAL 326
Query: 230 FKQM-PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-------SNIASWTNVIVGYFE 281
QM E + SVL V ++ + S I + +I Y +
Sbjct: 327 LCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSK 386
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
G++GSA F++M T DVT WN +I G ++ + L+ F +M+ +G PD++TF V
Sbjct: 387 CGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGV 446
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN---AMITMYARCGNIQSALLEFSSVPI 398
L C+ ++ G + I + FT + MI M R G AL + +P
Sbjct: 447 LMGCNHSGMVEEGELFF--RLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPF 504
Query: 399 H-DIISWNSIICGLAYHG-------YAEKALELFER 426
D + W +++ H A++ +EL +R
Sbjct: 505 EPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDR 540
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 192/570 (33%), Positives = 297/570 (52%), Gaps = 35/570 (6%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
++ WN++I + +L +F M + + +L A K++
Sbjct: 91 NIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLH 150
Query: 142 ARDVA--------SWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
A + T +++ + G + AR +FDK +D ++ +I GY+ G V
Sbjct: 151 AHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVD 210
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKTWNSIISVLIRNG 252
A LF ++ +D+ SW +I G V S R + A++ F +M E ++++SVL G
Sbjct: 211 DARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACG 270
Query: 253 LVKEAH------SYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNV 305
++ S++ + N +V Y + GE+G+A K+F+ M +DV +WN
Sbjct: 271 HLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNT 330
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
MI G L EE L F M +P++ TF +VL C+ L LDLG+ +HA K
Sbjct: 331 MIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNL 390
Query: 366 RN--QFTTVS--NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
+ VS ++I MYA+CG ++ A F S+ + SWN++I GLA +G+AE+AL
Sbjct: 391 KGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERAL 450
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
LFE M F+PDDITFVGVLSAC+ AG V+ G YF M Y + P+ HY C++DL
Sbjct: 451 GLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDL 510
Query: 482 LGRFGLIDEAMNLLN--EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
L R G DEA L+ E+ DG +WG+LL ACRIH ++ GE ER+ ELEP
Sbjct: 511 LARSGKFDEAKVLMGNMEMEPDG-----AIWGSLLNACRIHGQVEFGEYVAERLFELEPE 565
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
NSG Y++L+ +Y GR +D +I ++ + G+KK PGC+ I+I+ H FL GD HP+
Sbjct: 566 NSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQ 625
Query: 600 FHRLRYLLNLLHTEIER--------EILFD 621
+ +L+ + +E E+L+D
Sbjct: 626 SENIFRMLDEVDRLLEETGFVPDTSEVLYD 655
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 201/418 (48%), Gaps = 25/418 (5%)
Query: 55 YNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
+ ++I Q ++ A+ VFD +RD V++ ++I+GYV G +D+A R+F +P KDV
Sbjct: 165 HTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDV 224
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVA-SWTIMVNGLVREG--RIVEARK----- 166
VSWN +I V R + A + F M DV+ + + MV+ L G R +E K
Sbjct: 225 VSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSW 284
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ D+ K++Q N ++ Y G +G A LF M D+D+ W +I G + + A
Sbjct: 285 VRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEA 344
Query: 227 ISYFKQMPE----TCEKTWNSIISVLIRNG---LVKEAHSYLEKY-----PYSNIASWTN 274
+ F+ M + T+ +++ G L K H+Y++K +N++ WT+
Sbjct: 345 LVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTS 404
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+IV Y + G V A +VF M +R + WN MI GL N E L F +M G PD
Sbjct: 405 IIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPD 464
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIK-IARNQFTTVSNAMITMYARCGNIQSALLEF 393
+ TF VL+ C+ ++LG + + K + MI + AR G A +
Sbjct: 465 DITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLM 524
Query: 394 SSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
++ + D W S++ HG E + E RL + +P++ + VL + YAG
Sbjct: 525 GNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAE--RLFELEPEN-SGAYVLLSNIYAG 579
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 137/315 (43%), Gaps = 59/315 (18%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
++ A+ +FDK RD V++ +I GY G +D+A LF+++P +D+ ++N +IAG +
Sbjct: 176 GELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYV 235
Query: 64 QSDNVQGAKEVFDGMEVRDVV--------------------------TW----------- 86
QS + A F M+ DV +W
Sbjct: 236 QSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQ 295
Query: 87 --NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM---- 140
N+++ Y G I A ++F GM KDV+ WN +IG + + A F+ M
Sbjct: 296 LVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLREN 355
Query: 141 -GARDVASWTIMVN----GLVREGRIVEA---RKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
DV ++ G + G+ V A + L +V W +I Y GCV
Sbjct: 356 VTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCV 415
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIIS 246
VAE +F+ M R L SW +I+GL + + A+ F++M P+ + T+ ++S
Sbjct: 416 EVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPD--DITFVGVLS 473
Query: 247 VLIRNGLVKEAHSYL 261
+ G V+ H Y
Sbjct: 474 ACTQAGFVELGHRYF 488
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 23/190 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
++ A+ +F M R +WN MI G NG + A+ LF +M + D T+ V++
Sbjct: 415 VEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSA 474
Query: 62 LMQSDNVQGAKEVFDGME-----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-DVV 115
Q+ V+ F M + + MI +G DEA + M ++ D
Sbjct: 475 CTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGA 534
Query: 116 SWNLVIGALVNCQRMD--------LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
W G+L+N R+ +AE F E+ + ++ ++ N GR + K+
Sbjct: 535 IW----GSLLNACRIHGQVEFGEYVAERLF-ELEPENSGAYVLLSNIYAGAGRWDDVAKI 589
Query: 168 FDKMPAKDVQ 177
K+ K ++
Sbjct: 590 RTKLNDKGMK 599
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 207/735 (28%), Positives = 338/735 (45%), Gaps = 127/735 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRG------------YFKN----GFLDNAMCLFNQMP- 48
++ A+ +FDKMP+RD V WN MI G +F++ G +++ L N P
Sbjct: 180 LKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPG 239
Query: 49 ------------------ERDMFTY--NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
RD + N +I + +V A+ VFD M +D V+W +
Sbjct: 240 ICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGT 299
Query: 89 MISGYVCNGLIDEALRVF----------------------------------HGMPLKDV 114
M++GY NG E L +F HG L+
Sbjct: 300 MMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQR 359
Query: 115 VSWNLVIGA-----LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
+ ++++ C + A+ F + RD+ +W+ ++ LV+ G EA LF
Sbjct: 360 IDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQ 419
Query: 170 KM----------------PA-----------------------KDVQAWNLMIAGYLDNG 190
+M PA D+ +++ Y G
Sbjct: 420 EMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCG 479
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWNSIISVLI 249
A F +M RD+ +W LING AI F ++ +++ V+
Sbjct: 480 FFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVP 539
Query: 250 RNGLVKE------AHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMT-TRDVT 301
L+ + H + K + + N ++ Y + G + SA +F T+D
Sbjct: 540 ACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEV 599
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WNV+I +N +E + F QM+ P++ TF SVL + L G HA
Sbjct: 600 TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACI 659
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
I++ T V N++I MYA+CG + + F+ + D +SWN+++ G A HG+ ++A+
Sbjct: 660 IQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAI 719
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
LF M+ + + D ++FV VLSAC + GLV++GR F M +KY ++P HY C+VDL
Sbjct: 720 ALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDL 779
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LGR GL DE + I+ +E VWGALLG+CR+H+N+K+GE+A + +++LEP N
Sbjct: 780 LGRAGLFDETLGF---IKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNP 836
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFH 601
+++L+ +Y GR DA + ++M + G+KK PGCSW+++ + H F GD SHP+
Sbjct: 837 AHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLE 896
Query: 602 RLRYLLNLLHTEIER 616
+ L N L ++E+
Sbjct: 897 SMHLLWNTLLEKMEK 911
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 269/602 (44%), Gaps = 87/602 (14%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAM----CLFNQMPERDMFTYNTVIAGLMQ 64
A+++FD P + WN MIR Y ++ + A+ C+ + E D +T+ V+
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 65 SDNVQG-----------------------------------AKEVFDGMEVRDVVTWNSM 89
+ N+Q A+EVFD M RDVV WN+M
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 201
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEMGARDV 145
I+G + EA+ F M L V VS + + ++L S + RD
Sbjct: 202 IAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF 261
Query: 146 ASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+S + NGL+ + G + AR++FD+M +D +W M+AGY NGC +LF K
Sbjct: 262 SS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDK 319
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS-Y 260
M +L N +N +A+S F ET + + G KE H
Sbjct: 320 M---------KLGNVRINKV---SAVSAFLAAAETID----------LEKG--KEIHGCA 355
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
L++ S+I T ++V Y + GE A ++F + RD+ W+ +I L + EE L
Sbjct: 356 LQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEAL 415
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F +M+ P+ T S+L C+DL L LG+ IH +K + + A+++MY
Sbjct: 416 SLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMY 475
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
A+CG +AL F+ + DI++WNS+I G A G A+++F ++RL+ PD T V
Sbjct: 476 AKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMV 535
Query: 441 GVLSACSYAGLVDQGRYYFDCMKN---KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
GV+ AC+ +DQG C+ K + ++D+ + G + A L N+
Sbjct: 536 GVVPACALLNDLDQGT----CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNK 591
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIK--VGEIAGERVMELEPNN-SGVYLILTEMYLSC 554
EV+ W ++ A + + K + R+ PN+ + V ++ YL+
Sbjct: 592 TDFTKDEVT---WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAA 648
Query: 555 GR 556
R
Sbjct: 649 FR 650
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 134/332 (40%), Gaps = 47/332 (14%)
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
S T++I Y + A VF+ +WN MI + E L+ + M E G
Sbjct: 65 SITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKG 124
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
PD TFT VL C+ L G H + + + + ++ MY++ G+++ A
Sbjct: 125 LEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAR 184
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV---------- 440
F +P D+++WN++I GL+ +A++ F M+L +P ++ +
Sbjct: 185 EVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLS 244
Query: 441 -----------------------GVLSACSYAGLVDQGRYYFDCMKNK-----YFLQPRS 472
G++ S G VD R FD M ++ +
Sbjct: 245 NIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGY 304
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
AH C V++L F + M L N +R + + + A L A + K EI G
Sbjct: 305 AHNGCFVEVLELF----DKMKLGN-VRINKV----SAVSAFLAAAETIDLEKGKEIHGCA 355
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ + ++ V L MY CG E AK++F
Sbjct: 356 LQQRIDSDILVATPLMVMYAKCGETEKAKQLF 387
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 191/576 (33%), Positives = 311/576 (53%), Gaps = 36/576 (6%)
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA-- 123
D + A VF+ + +++ WN+M+ G + + L ++ M VS V A
Sbjct: 31 DGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRM-----VSXGHVPNAYT 85
Query: 124 ----LVNCQRMDLAE------SYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMP 172
L +C + E + ++G D + T +++ R GR+ +ARK+FD
Sbjct: 86 FPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSS 145
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+DV + +I GY G V A +F + +RD+ SW +I G V + + A+ FK+
Sbjct: 146 QRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKE 205
Query: 233 MPETC----EKTWNSIISVLIRNG---LVKEAHSYLE-KYPYSNIASWTNVIVG-YFEMG 283
M T E T S++S ++G L +E H+ ++ + + + N +G Y + G
Sbjct: 206 MMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCG 265
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
+V A +FE ++ +DV WN +I G +L +E L F +M SG SP++ T SVL
Sbjct: 266 DVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLP 325
Query: 344 ICSDLPTLDLGRQIHAQAIKIAR--NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
C+ L +D+GR IH K + + + ++I MYA+CG+I++A F+S+ +
Sbjct: 326 ACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSL 385
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
SWN++I G A HG A A +LF RMR +PDDIT VG+LSACS++GL+D GR+ F
Sbjct: 386 SSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKS 445
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN--EIRADGIEVSPTVWGALLGACRI 519
+ Y + P+ HY C++DLLG GL EA +++ + DG+ +W +LL AC++
Sbjct: 446 VTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGV-----IWCSLLKACKM 500
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
H N+++ E +++ME+EP NSG Y++L+ +Y + GR ED RI + G+KK PGCS
Sbjct: 501 HGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCS 560
Query: 580 WIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
I+I+ H F+ GD HP+ + +L + +E
Sbjct: 561 SIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLE 596
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 133/567 (23%), Positives = 245/567 (43%), Gaps = 87/567 (15%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D +I Y +NG L++A +F+ +RD+ + +I G +V+ A++VFD +
Sbjct: 117 DRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXIT 176
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMDLAESYFK 138
RDVV+WN+MI+GYV N +EAL +F M +V ++ L C A+S
Sbjct: 177 ERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSAC-----AQSGSI 231
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
E+G R++ + +G +IV N I Y G V +A L
Sbjct: 232 ELG-REIHTLVDDHHGFGSSLKIV-----------------NAFIGLYSKCGDVEIASGL 273
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV 254
F+ + +D+ SW LI G + A+ F++M + E T S++ G +
Sbjct: 274 FEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 333
Query: 255 ---KEAHSYLEKY---PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+ H Y++K + A T++I Y + G++ +A +VF M + ++ WN MIF
Sbjct: 334 DIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIF 393
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
G + F +M+++G PD+ T +L+ CS LDLGR I
Sbjct: 394 GFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHI----------- 442
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
F +V+ +++ P + + +I L + G ++A E+ M
Sbjct: 443 FKSVTQ-----------------DYNITP--KLEHYGCMIDLLGHAGLFKEAEEIIHMMP 483
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR-SAHYTCVVDLLGRFGL 487
+ +PD + + +L AC G ++ + + ++P S Y + ++ G
Sbjct: 484 M---EPDGVIWCSLLKACKMHGNLELAESFAQKLME---IEPENSGSYVLLSNIYATAGR 537
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM--ELEPNNSGVYL 545
++ + + G++ P C ++I++ + E ++ +L P + +Y
Sbjct: 538 WEDVARIREVLNGKGMKKVP--------GC---SSIEIDSVVHEFIIGDKLHPQSREIYR 586
Query: 546 ILTEMYL---SCGRREDAKRIFAQMKE 569
+L EM + G D + +M+E
Sbjct: 587 MLEEMDVLLEEAGFVPDTSEVLQEMEE 613
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 141/354 (39%), Gaps = 90/354 (25%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
RN R+++A+ +FD QRD V+ +I GY G + +A +F+ + ERD+ ++N +I G
Sbjct: 130 RNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITG 189
Query: 62 LMQSDNVQGAKEVFD-----------------------------GMEVRDVV-------- 84
+++ + A E+F G E+ +V
Sbjct: 190 YVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGS 249
Query: 85 ---TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
N+ I Y G ++ A +F G+ KDVVSWN +IG + A F+EM
Sbjct: 250 SLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEML 309
Query: 141 ---------------------GARDVASW-------------------TIMVNGLVREGR 160
GA D+ W T +++ + G
Sbjct: 310 RSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGD 369
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLING 216
I A ++F+ M K + +WN MI G+ +G A DLF +M + D + L++
Sbjct: 370 IEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSA 429
Query: 217 LVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVKEAHSYLEKYP 265
+S +D FK + + T + +I +L GL KEA + P
Sbjct: 430 CSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMP 483
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 208/704 (29%), Positives = 340/704 (48%), Gaps = 105/704 (14%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS--- 65
A LF ++ R+ +W ++ + GF ++A+ F +M E +F N V+ ++++
Sbjct: 1230 AVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGS 1289
Query: 66 -------DNVQG-----------------------------AKEVFDGMEVRDVVTWNSM 89
V G A++VFD M ++VVTWNSM
Sbjct: 1290 LQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSM 1349
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQ---------RMDLAESYFKEM 140
I GYV NGL EA+ VF+ M ++ + + + + ++ + A + +
Sbjct: 1350 IVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSL 1409
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
++ +I +N + G I +A +F +M KDV WNL+I+ Y+ + VG A ++
Sbjct: 1410 DLDNILGSSI-INFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCH 1468
Query: 201 KMH---------------------------------------DRDLTSWKQLINGLVNSR 221
M + D+ +I+
Sbjct: 1469 LMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCE 1528
Query: 222 RIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY----SNIASWTNVIV 277
RID A F E WN++++ + GL EA + + N+ SW +VI+
Sbjct: 1529 RIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVIL 1588
Query: 278 GYFEMGEVGSAIKVFELMTT----RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
G+ G+V A +F M + ++ W +I GL ++ G E + FF +M+E+G P
Sbjct: 1589 GFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRP 1648
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF---TTVSNAMITMYARCGNIQSAL 390
A+ TSVL C+D+P+L GR IH I R++F V+ +++ MYA+CG+I A
Sbjct: 1649 SIASITSVLLACTDIPSLWYGRAIHG---FITRHEFCLSVPVATSLVDMYAKCGSIDEAK 1705
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F + ++ +N++I A HG A +AL LF+ ++ +PD ITF +LSACS+AG
Sbjct: 1706 KVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAG 1765
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
LV++G F M +K+ + P HY CVV LL R G +DEA+ L I + +
Sbjct: 1766 LVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRL---ILTMPFQPDAHIL 1822
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
G+LL ACR H+ I++GE + + +LEP+NSG Y+ L+ Y + GR + + MK
Sbjct: 1823 GSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVR 1882
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
G++K PGCSWIQ +VF++GD SHPK + +L +L +E+
Sbjct: 1883 GLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEM 1926
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 143/598 (23%), Positives = 248/598 (41%), Gaps = 133/598 (22%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++A+ +FD M +++ VTWN MI GY +NG A+ +F M + +A + +
Sbjct: 1328 LEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSA 1387
Query: 66 ------------------------DNVQG---------------AKEVFDGMEVRDVVTW 86
DN+ G A+ VF M +DVVTW
Sbjct: 1388 SANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTW 1447
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLK---------------------------------- 112
N +IS YV + + +AL + H M +
Sbjct: 1448 NLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIR 1507
Query: 113 -----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
DVV N +I C+R+D A F RD+ W ++ + G EA KL
Sbjct: 1508 RNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKL 1567
Query: 168 FDKMP----AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD----RDLTSWKQLINGLVN 219
F +M +V +WN +I G+L NG V A+D+F +M +L +W LI+GL
Sbjct: 1568 FYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQ 1627
Query: 220 SRRIDAAISYFKQMPET-CEKTWNSIISVLIRNGLV------KEAHSYLEKYPYS-NIAS 271
S AI +F++M E + SI SVL+ + + H ++ ++ + ++
Sbjct: 1628 SGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPV 1687
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
T+++ Y + G + A KVF +M+++++ ++N MI + E L F +++ G
Sbjct: 1688 ATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGI 1747
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAI-KIARNQFTTVSNAMITMYARCGNIQSAL 390
PD+ TFTS+L+ CS ++ G + A + K N ++++ +RCGN+ AL
Sbjct: 1748 EPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEAL 1807
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
++P F+PD +L+AC
Sbjct: 1808 RLILTMP----------------------------------FQPDAHILGSLLTACREHH 1833
Query: 451 LVDQGRYYFDCMKNKYFLQPR-SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
++ G Y K+ + L+P S +Y + + G E N+ + ++ G+ +P
Sbjct: 1834 EIELGEY---LSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNP 1888
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 162/374 (43%), Gaps = 57/374 (15%)
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFEL 294
E T I + +++NG + Y+E T ++V Y + A+++F
Sbjct: 1187 ERALHTGQQIHARILKNGDFFAKNEYVE----------TKLVVFYAKCDFPEVAVRLFHR 1236
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+ R+V W ++ E+ L F++M+E+G PDN +VL C L + LG
Sbjct: 1237 LRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLG 1296
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
+ +H +K+ VS++++ MY +CG ++ A F S+ ++++WNS+I G +
Sbjct: 1297 KGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQN 1356
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSAC---------------------------- 446
G ++A+++F MR+ +P +T LSA
Sbjct: 1357 GLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILG 1416
Query: 447 -------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
S GL++ F M L+ + ++ + + +A+N+ + +R
Sbjct: 1417 SSIINFYSKVGLIEDAELVFSRM-----LEKDVVTWNLLISSYVQHHQVGKALNMCHLMR 1471
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAG----ERVMELEPNNSGVYLILTEMYLSCG 555
++ + ++L A + +NIK+G+ R +E ++ V + +MY C
Sbjct: 1472 SENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLE---SDVVVANSIIDMYAKCE 1528
Query: 556 RREDAKRIFAQMKE 569
R +DA+++F E
Sbjct: 1529 RIDDARKVFDSTTE 1542
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 135/289 (46%), Gaps = 29/289 (10%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIA 60
RI +A+ +FD +RD V WN ++ Y + G A+ LF QM ++ ++N+VI
Sbjct: 1529 RIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVIL 1588
Query: 61 GLMQSDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-V 115
G +++ V AK++F M+ +++TW ++ISG +G EA+ F M +
Sbjct: 1589 GFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRP 1648
Query: 116 SWNLVIGALVNCQRMDLAESYF---------KEMGARDVASWTIMVNGLVREGRIVEARK 166
S + L+ C D+ ++ + V T +V+ + G I EA+K
Sbjct: 1649 SIASITSVLLACT--DIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKK 1706
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRR 222
+F M +K++ +N MI+ Y +G A LF+ + + D ++ +++ ++
Sbjct: 1707 VFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGL 1766
Query: 223 IDAAISYFKQMPE-----TCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
++ ++ F M + + ++S+L R G + EA + P+
Sbjct: 1767 VNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPF 1815
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 201/663 (30%), Positives = 323/663 (48%), Gaps = 76/663 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTY- 55
+R I A +F KMP+RD +WNVM+ GY K GFL+ A+ L+ +M D++T+
Sbjct: 142 VRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFP 201
Query: 56 ----------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVR 81
N ++ + ++ A++VFDGM V
Sbjct: 202 CVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVT 261
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF-KEM 140
D ++WN+MI+G+ N + L +F M L++ V NL+ V L+E F KEM
Sbjct: 262 DCISWNAMIAGHFENHECEAGLELFLTM-LENEVQPNLMTITSVTVASGMLSEVGFAKEM 320
Query: 141 G--------ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A DVA ++ GR+ +A K+F +M KD +W MI+GY NG
Sbjct: 321 HGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFP 380
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A +++ M +++ I + + + ++ E + I V++ N
Sbjct: 381 DKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNK-GFIRYVVVANA 439
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
L LE Y S + AI+VF+ M +DV W+ MI G
Sbjct: 440 L-------LEMYAKSK---------------HIDKAIEVFKFMAEKDVVSWSSMIAGFCF 477
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N E L +F M P++ TF + L+ C+ L G++IHA ++ V
Sbjct: 478 NHRSFEALYYFRYML-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYV 536
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
NA++ +Y +CG A +FS D++SWN ++ G HG + AL LF +M
Sbjct: 537 PNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGE 596
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
PD++TFV +L ACS AG+V QG F M K+ + P HY C+VDLL R G + EA
Sbjct: 597 HPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAY 656
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
NL+N + I+ VWGALL CRIH ++++GE+A + ++ELEPN+ +++L ++Y
Sbjct: 657 NLINRMP---IKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYT 713
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
G+ R+ M+E G++++ GCSW+++ H FL+ D SHP+ + +L+ ++
Sbjct: 714 DAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYE 773
Query: 613 EIE 615
++
Sbjct: 774 RMK 776
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 222/502 (44%), Gaps = 66/502 (13%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL---- 111
N +++ L++ + A VF M RDV +WN M+ GY G ++EAL +++ M
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 112 KDVVSWNLVI---GALVNCQRMDLAESYFKEMGARD-VASWTIMVNGLVREGRIVEARKL 167
DV ++ V+ G + + + ++ G D V +V + G IV ARK+
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
FD M D +WN MIAG+ +N +LF M + ++
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQ------------------- 295
Query: 228 SYFKQMPETCEKTWNSIISVLIRN-GLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEV 285
P T ++ S ++ G KE H + K ++ ++A ++I Y +G +
Sbjct: 296 ------PNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRM 349
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
G A K+F M T+D W MI G +N ++ L+ + M+ SPD+ T S L C
Sbjct: 350 GDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAAC 409
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
+ L LD+G ++H A ++ V+NA++ MYA+ +I A+ F + D++SW+
Sbjct: 410 ACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWS 469
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR--------- 456
S+I G ++ + +AL F M L KP+ +TF+ LSAC+ G + G+
Sbjct: 470 SMIAGFCFNHRSFEALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRC 528
Query: 457 --------------YYFDCMKNKYFLQPRSAH-------YTCVVDLLGRFGLIDEAMNLL 495
Y C + Y S H + ++ GL D A++L
Sbjct: 529 GIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLF 588
Query: 496 NEIRADGIEVSPTVWGALLGAC 517
N++ G + ALL AC
Sbjct: 589 NQMVEMGEHPDEVTFVALLCAC 610
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 188/417 (45%), Gaps = 23/417 (5%)
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS-YF 230
P+ ++ N M++ + G + A +F KM +RD+ SW ++ G ++ A+ Y+
Sbjct: 127 PSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYY 186
Query: 231 KQMPETCEKTWNSIISVLIRNGLV------KEAHSYLEKYPYSNIASWTNVIVG-YFEMG 283
+ + + VL G + +E H+++ ++ + + N +V Y + G
Sbjct: 187 RMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCG 246
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
++ +A KVF+ M D WN MI G EN E GL+ F+ M E+ P+ T TSV
Sbjct: 247 DIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTV 306
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
L + +++H A+K N++I MY G + A FS + D +S
Sbjct: 307 ASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMS 366
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
W ++I G +G+ +KALE++ M L + PDD+T L+AC+ G +D G + +
Sbjct: 367 WTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQ 426
Query: 464 NKYFLQPRSAHYTCVVDLL----GRFGLIDEAMNLLNEIRADGIEVSPTVWGALL-GACR 518
NK F++ Y V + L + ID+A+ + + + W +++ G C
Sbjct: 427 NKGFIR-----YVVVANALLEMYAKSKHIDKAIEVFKFMAEKDV----VSWSSMIAGFCF 477
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
H + + + ++P NS ++ + G K I A + G+ E
Sbjct: 478 NHRSFEALYYFRYMLGHVKP-NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSE 533
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 328 ESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
ES P PD + ++ +C +D G + A+A + + NAM++M R G I
Sbjct: 88 ESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEI 147
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
A F+ +P D+ SWN ++ G G+ E+AL+L+ RM +PD TF VL C
Sbjct: 148 WHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTC 207
>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 185/632 (29%), Positives = 324/632 (51%), Gaps = 59/632 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R ++EAQ LF++MP+R+ +WN MI GY K+G ++ LF+ MP +D F++N VI+G
Sbjct: 54 RCNSMREAQQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISG 113
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-------DV 114
+ N++ A+ +F+ M ++ + WNSMI GY CNG EA+ +F + L D
Sbjct: 114 FAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDT 173
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDK 170
V+GA N +D + + +V +++ + LV + G I A + +
Sbjct: 174 FVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNL 233
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
M D + + +I+GY G + A +F + + W +I+G V + A+ F
Sbjct: 234 MKEPDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELF 293
Query: 231 KQM-PETCEKTWNSIISVL--------IRNGLVKEAHSY--------------LEKYP-- 265
M + ++ +++ SVL I G+ AH Y ++ Y
Sbjct: 294 NNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKC 353
Query: 266 ---------YSNIASWTNVIVG-----YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
+S++ ++ +++ Y G + A ++F+ M ++ + WN MI G
Sbjct: 354 RRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFS 413
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+N E L F +M + G D + V++ C+ + +L+LG QI A+A I
Sbjct: 414 QNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQI 473
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
+S +++ Y +CG ++ F + D + WNS++ G A +G+ +AL +F++MR
Sbjct: 474 ISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVG 533
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
+P DITFVGVLSAC + GLV++GR +F MK Y + P HY+C+VDL R GL+++A
Sbjct: 534 VQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDA 593
Query: 492 MNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMY 551
MNL+ ++ ++ ++W ++L C H N +G+ +R+++L+P NSG Y+ L+ +Y
Sbjct: 594 MNLIEQMP---LKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIY 650
Query: 552 LSC---GRREDAKRIFAQMKENGVKKEPGCSW 580
+ GR +++ M + + K PGCSW
Sbjct: 651 ATFEDWGRSAQVRKL---MYDKKIPKVPGCSW 679
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 36/269 (13%)
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIA-RNQFTTVSNAMITMYARCGNIQSALLE 392
D + L C++ ++ GR +H +K + ++ N ++ MY+RC +++ A
Sbjct: 5 DLHSLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQL 64
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F +P + SWN++I G G K+LELF+ M D ++ V+S + G +
Sbjct: 65 FEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMP----HKDAFSWNVVISGFAKEGNL 120
Query: 453 DQGRYYFDCM--KNKYFLQPRSAHYTCVVDLLGRFGLI-DEAMNLLNEIRADGIEVSPTV 509
+ R F+ M KN Y C GL D ++N L D ++ V
Sbjct: 121 EVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVV 180
Query: 510 -----WGALLGACRIHNNIKVGEIAGERVM------------ELEPNNSGVYLI------ 546
GAL +IH I V E+ + V+ +++ N + L+
Sbjct: 181 GACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAF 240
Query: 547 ----LTEMYLSCGRREDAKRIFAQMKENG 571
L Y SCGR DA+RIF +K N
Sbjct: 241 SLSALISGYASCGRMNDARRIFC-LKSNA 268
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 304/536 (56%), Gaps = 31/536 (5%)
Query: 101 EALRVFHGM--PLKDVVSWNLVIGALVN-CQRMDLAESYFKEMGA-------RDVASWTI 150
+A+ GM PL+ V + ++ N C + DL + + M A D +++
Sbjct: 2 KAISKLKGMKPPLRYVADPSPLVNEFANFCHQWDLHRA-MRAMDAMERHGVFADAITYSE 60
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQ----AWNLMIAGYLDNGCVGVAEDLFQKMHDRD 206
++ G + E +++ + + K + N ++ Y+ + AEDLF +M +R+
Sbjct: 61 LIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERN 120
Query: 207 LTSWKQLINGL---VNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL--VKEAHSYL 261
+ SW +I+ +N + + I F++ T++S++ +GL +++ H +
Sbjct: 121 VVSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFTYSSVLRAC--DGLPNLRQLHCGI 178
Query: 262 EKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
K S++ + +I Y + ++ +A+ VF+ M TRD+ VWN +I G +N G E L
Sbjct: 179 IKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEAL 238
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F +MK +G D AT TSVL C+ L L+LGRQ+H +K +Q ++NA+I MY
Sbjct: 239 NLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKF--DQDLILNNALIDMY 296
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+CG+++ A FS + D+ISW++++ GLA +GY+ +ALELFE M+ + +P+ IT +
Sbjct: 297 CKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVL 356
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
GVL ACS+AGLV++G YYF MK + + P HY C++DLLGR G +DEA+ L++E+
Sbjct: 357 GVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMEC 416
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
E W LLGACR+H N+ + A ++++ELEP ++G Y++L+ +Y + R ED
Sbjct: 417 ---EPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDV 473
Query: 561 KRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+ M G++K PGCSWI+++ HVF+ GD+SHPK + LN L IER
Sbjct: 474 AEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDL---IER 526
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 189/436 (43%), Gaps = 55/436 (12%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAM----CLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF 75
D +T++ +I+ G + +F + E MF NT++ ++ + ++ A+++F
Sbjct: 54 DAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLF 113
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALR----VFHGMPLKDVVSWNLVIGA---LVNCQ 128
D M R+VV+W +MIS Y N L D+AL+ +F ++ +++ V+ A L N +
Sbjct: 114 DEMPERNVVSWTTMISAY-SNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLR 172
Query: 129 RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD 188
++ K DV + +++ + + A +FD+MP +D+ WN +I G+
Sbjct: 173 QLHCG--IIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQ 230
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL 248
N A +LF++M + + + ++ R ++ +
Sbjct: 231 NSDGNEALNLFKRMKRAGFLADQATLTSVL---RACTGLALLE----------------- 270
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
L ++ H ++ K+ I + +I Y + G + A F M +DV W+ M+
Sbjct: 271 ----LGRQVHVHVLKFDQDLILN-NALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVA 325
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI---- 364
GL +N + L+ F MKESG P+ T VL CS ++ G K+
Sbjct: 326 GLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVD 385
Query: 365 -ARNQFTTVSNAMITMYARCGNIQSA---LLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
R + +I + R G + A + E P D ++W +++ H +
Sbjct: 386 PGREHY----GCLIDLLGRAGRLDEAVKLIHEMECEP--DSVTWRTLLGACRVHRNVD-- 437
Query: 421 LELFERMRLTDFKPDD 436
L ++ ++ + +P+D
Sbjct: 438 LAIYAAKKIIELEPED 453
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 165/372 (44%), Gaps = 61/372 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAM-CL---FNQMPERDMFTYNTVIAG 61
++EA++LFD+MP+R+ V+W MI Y N D A+ CL F + +MFTY++V
Sbjct: 106 LEEAEDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCLILMFREGVRPNMFTYSSV--- 161
Query: 62 LMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
L D + +++ G+E DV +++I Y +D AL VF MP +D+V
Sbjct: 162 LRACDGLPNLRQLHCGIIKTGLE-SDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVV 220
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGA----RDVASWTIMVN-----GLVREGRIVEARKL 167
WN +IG + A + FK M D A+ T ++ L+ GR V L
Sbjct: 221 WNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVL 280
Query: 168 -FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
FD +D+ N +I Y G + A F +M ++D+ SW ++ GL + A
Sbjct: 281 KFD----QDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQA 336
Query: 227 ISYFKQMPETCEK-TWNSIISVLI---RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
+ F+ M E+ + + +++ VL GLV++ Y
Sbjct: 337 LELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFR-------------------- 376
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
S K+F + R+ + +I LG +E +K +M+ PD+ T+ ++L
Sbjct: 377 ----SMKKLFGVDPGRE--HYGCLIDLLGRAGRLDEAVKLIHEME---CEPDSVTWRTLL 427
Query: 343 TICSDLPTLDLG 354
C +DL
Sbjct: 428 GACRVHRNVDLA 439
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 20/179 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-DMFTYNTVI----- 59
+++A + F +M ++D ++W+ M+ G +NG+ A+ LF M E Y TV+
Sbjct: 302 LEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFA 361
Query: 60 ---AGLMQSD--NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-D 113
AGL++ + K++F R+ + +I G +DEA+++ H M + D
Sbjct: 362 CSHAGLVEKGWYYFRSMKKLFGVDPGRE--HYGCLIDLLGRAGRLDEAVKLIHEMECEPD 419
Query: 114 VVSWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGR---IVEARK 166
V+W ++GA + +DLA K E+ D ++ ++ N R + E RK
Sbjct: 420 SVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRK 478
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 208/704 (29%), Positives = 340/704 (48%), Gaps = 105/704 (14%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS--- 65
A LF ++ R+ +W ++ + GF ++A+ F +M E +F N V+ ++++
Sbjct: 135 AVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGS 194
Query: 66 -------DNVQG-----------------------------AKEVFDGMEVRDVVTWNSM 89
V G A++VFD M ++VVTWNSM
Sbjct: 195 LQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSM 254
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQ---------RMDLAESYFKEM 140
I GYV NGL EA+ VF+ M ++ + + + + ++ + A + +
Sbjct: 255 IVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSL 314
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
++ +I +N + G I +A +F +M KDV WNL+I+ Y+ + VG A ++
Sbjct: 315 DLDNILGSSI-INFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCH 373
Query: 201 KMH---------------------------------------DRDLTSWKQLINGLVNSR 221
M + D+ +I+
Sbjct: 374 LMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCE 433
Query: 222 RIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY----SNIASWTNVIV 277
RID A F E WN++++ + GL EA + + N+ SW +VI+
Sbjct: 434 RIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVIL 493
Query: 278 GYFEMGEVGSAIKVFELMTT----RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
G+ G+V A +F M + ++ W +I GL ++ G E + FF +M+E+G P
Sbjct: 494 GFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRP 553
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF---TTVSNAMITMYARCGNIQSAL 390
A+ TSVL C+D+P+L GR IH I R++F V+ +++ MYA+CG+I A
Sbjct: 554 SIASITSVLLACTDIPSLWYGRAIHG---FITRHEFCLSVPVATSLVDMYAKCGSIDEAK 610
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F + ++ +N++I A HG A +AL LF+ ++ +PD ITF +LSACS+AG
Sbjct: 611 KVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAG 670
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
LV++G F M +K+ + P HY CVV LL R G +DEA+ L I + +
Sbjct: 671 LVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRL---ILTMPFQPDAHIL 727
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
G+LL ACR H+ I++GE + + +LEP+NSG Y+ L+ Y + GR + + MK
Sbjct: 728 GSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVR 787
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
G++K PGCSWIQ +VF++GD SHPK + +L +L +E+
Sbjct: 788 GLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEM 831
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 144/599 (24%), Positives = 249/599 (41%), Gaps = 135/599 (22%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++A+ +FD M +++ VTWN MI GY +NG A+ +F M + +A + +
Sbjct: 233 LEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSA 292
Query: 66 ------------------------DNVQG---------------AKEVFDGMEVRDVVTW 86
DN+ G A+ VF M +DVVTW
Sbjct: 293 SANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTW 352
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLK---------------------------------- 112
N +IS YV + + +AL + H M +
Sbjct: 353 NLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIR 412
Query: 113 -----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
DVV N +I C+R+D A F RD+ W ++ + G EA KL
Sbjct: 413 RNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKL 472
Query: 168 -----FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD----RDLTSWKQLINGLV 218
FD +P +V +WN +I G+L NG V A+D+F +M +L +W LI+GL
Sbjct: 473 FYQMQFDSVP-PNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLA 531
Query: 219 NSRRIDAAISYFKQMPET-CEKTWNSIISVLIRNGLV------KEAHSYLEKYPYS-NIA 270
S AI +F++M E + SI SVL+ + + H ++ ++ + ++
Sbjct: 532 QSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVP 591
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
T+++ Y + G + A KVF +M+++++ ++N MI + E L F +++ G
Sbjct: 592 VATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEG 651
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAI-KIARNQFTTVSNAMITMYARCGNIQSA 389
PD+ TFTS+L+ CS ++ G + A + K N ++++ +RCGN+ A
Sbjct: 652 IEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEA 711
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
L ++P F+PD +L+AC
Sbjct: 712 LRLILTMP----------------------------------FQPDAHILGSLLTACREH 737
Query: 450 GLVDQGRYYFDCMKNKYFLQP-RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
++ G Y K+ + L+P S +Y + + G E N+ + ++ G+ +P
Sbjct: 738 HEIELGEYL---SKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNP 793
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 162/374 (43%), Gaps = 57/374 (15%)
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFEL 294
E T I + +++NG + Y+E T ++V Y + A+++F
Sbjct: 92 ERALHTGQQIHARILKNGDFFAKNEYVE----------TKLVVFYAKCDFPEVAVRLFHR 141
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+ R+V W ++ E+ L F++M+E+G PDN +VL C L + LG
Sbjct: 142 LRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLG 201
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
+ +H +K+ VS++++ MY +CG ++ A F S+ ++++WNS+I G +
Sbjct: 202 KGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQN 261
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSAC---------------------------- 446
G ++A+++F MR+ +P +T LSA
Sbjct: 262 GLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILG 321
Query: 447 -------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
S GL++ F M L+ + ++ + + +A+N+ + +R
Sbjct: 322 SSIINFYSKVGLIEDAELVFSRM-----LEKDVVTWNLLISSYVQHHQVGKALNMCHLMR 376
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAG----ERVMELEPNNSGVYLILTEMYLSCG 555
++ + ++L A + +NIK+G+ R +E ++ V + +MY C
Sbjct: 377 SENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLE---SDVVVANSIIDMYAKCE 433
Query: 556 RREDAKRIFAQMKE 569
R +DA+++F E
Sbjct: 434 RIDDARKVFDSTTE 447
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 135/289 (46%), Gaps = 29/289 (10%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIA 60
RI +A+ +FD +RD V WN ++ Y + G A+ LF QM ++ ++N+VI
Sbjct: 434 RIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVIL 493
Query: 61 GLMQSDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-V 115
G +++ V AK++F M+ +++TW ++ISG +G EA+ F M +
Sbjct: 494 GFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRP 553
Query: 116 SWNLVIGALVNCQRMDLAESYF---------KEMGARDVASWTIMVNGLVREGRIVEARK 166
S + L+ C D+ ++ + V T +V+ + G I EA+K
Sbjct: 554 SIASITSVLLACT--DIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKK 611
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRR 222
+F M +K++ +N MI+ Y +G A LF+ + + D ++ +++ ++
Sbjct: 612 VFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGL 671
Query: 223 IDAAISYFKQMPETCE-----KTWNSIISVLIRNGLVKEAHSYLEKYPY 266
++ ++ F M + + ++S+L R G + EA + P+
Sbjct: 672 VNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPF 720
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 201/663 (30%), Positives = 323/663 (48%), Gaps = 76/663 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTY- 55
+R I A +F KMP+RD +WNVM+ GY K GFL+ A+ L+ +M D++T+
Sbjct: 142 VRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFP 201
Query: 56 ----------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVR 81
N ++ + ++ A++VFDGM V
Sbjct: 202 CVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVT 261
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF-KEM 140
D ++WN+MI+G+ N + L +F M L++ V NL+ V L+E F KEM
Sbjct: 262 DCISWNAMIAGHFENHECEAGLELFLTM-LENEVQPNLMTITSVTVASGMLSEVGFAKEM 320
Query: 141 G--------ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A DVA ++ GR+ +A K+F +M KD +W MI+GY NG
Sbjct: 321 HGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFP 380
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A +++ M +++ I + + + ++ E + I V++ N
Sbjct: 381 DKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNK-GFIRYVVVANA 439
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
L LE Y S + AI+VF+ M +DV W+ MI G
Sbjct: 440 L-------LEMYAKSK---------------HIDKAIEVFKFMAEKDVVSWSSMIAGFCF 477
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N E L +F M P++ TF + L+ C+ L G++IHA ++ V
Sbjct: 478 NHRSFEALYYFRYML-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYV 536
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
NA++ +Y +CG A +FS D++SWN ++ G HG + AL LF +M
Sbjct: 537 PNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGE 596
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
PD++TFV +L ACS AG+V QG F M K+ + P HY C+VDLL R G + EA
Sbjct: 597 HPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAY 656
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
NL+N + I+ VWGALL CRIH ++++GE+A + ++ELEPN+ +++L ++Y
Sbjct: 657 NLINRMP---IKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYT 713
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
G+ R+ M+E G++++ GCSW+++ H FL+ D SHP+ + +L+ ++
Sbjct: 714 DAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYE 773
Query: 613 EIE 615
++
Sbjct: 774 RMK 776
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 222/502 (44%), Gaps = 66/502 (13%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL---- 111
N +++ L++ + A VF M RDV +WN M+ GY G ++EAL +++ M
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 112 KDVVSWNLVI---GALVNCQRMDLAESYFKEMGARD-VASWTIMVNGLVREGRIVEARKL 167
DV ++ V+ G + + + ++ G D V +V + G IV ARK+
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
FD M D +WN MIAG+ +N +LF M + ++
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQ------------------- 295
Query: 228 SYFKQMPETCEKTWNSIISVLIRN-GLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEV 285
P T ++ S ++ G KE H + K ++ ++A ++I Y +G +
Sbjct: 296 ------PNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRM 349
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
G A K+F M T+D W MI G +N ++ L+ + M+ SPD+ T S L C
Sbjct: 350 GDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAAC 409
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
+ L LD+G ++H A ++ V+NA++ MYA+ +I A+ F + D++SW+
Sbjct: 410 ACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWS 469
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR--------- 456
S+I G ++ + +AL F M L KP+ +TF+ LSAC+ G + G+
Sbjct: 470 SMIAGFCFNHRSFEALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRC 528
Query: 457 --------------YYFDCMKNKYFLQPRSAH-------YTCVVDLLGRFGLIDEAMNLL 495
Y C + Y S H + ++ GL D A++L
Sbjct: 529 GIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLF 588
Query: 496 NEIRADGIEVSPTVWGALLGAC 517
N++ G + ALL AC
Sbjct: 589 NQMVEMGEHPDEVTFVALLCAC 610
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 149/306 (48%), Gaps = 8/306 (2%)
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS-YF 230
P+ ++ N M++ + G + A +F KM +RD+ SW ++ G ++ A+ Y+
Sbjct: 127 PSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYY 186
Query: 231 KQMPETCEKTWNSIISVLIRNGLV------KEAHSYLEKYPYSNIASWTNVIVG-YFEMG 283
+ + + VL G + +E H+++ ++ + + N +V Y + G
Sbjct: 187 RMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCG 246
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
++ +A KVF+ M D WN MI G EN E GL+ F+ M E+ P+ T TSV
Sbjct: 247 DIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTV 306
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
L + +++H A+K N++I MY G + A FS + D +S
Sbjct: 307 ASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMS 366
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
W ++I G +G+ +KALE++ M L + PDD+T L+AC+ G +D G + +
Sbjct: 367 WTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQ 426
Query: 464 NKYFLQ 469
NK F++
Sbjct: 427 NKGFIR 432
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 328 ESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
ES P PD + ++ +C +D G + A+A + + NAM++M R G I
Sbjct: 88 ESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEI 147
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
A F+ +P D+ SWN ++ G G+ E+AL+L+ RM +PD TF VL C
Sbjct: 148 WHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTC 207
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 213/671 (31%), Positives = 324/671 (48%), Gaps = 85/671 (12%)
Query: 6 IQEAQNLFDKMPQRDT--VTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTY-- 55
+ A +L + P D WN +IR Y NG + + LF M P+ F +
Sbjct: 75 LSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVF 134
Query: 56 -------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++A + ++ A++VFD M V DVV
Sbjct: 135 KACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVV 194
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMP-----LKDVVSWNLVIGALVNCQRMDLAESYFKE 139
+WNS+I Y G AL +F M D ++ ++ L C + S K+
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNIT---LVNVLPPCASLG-THSLGKQ 250
Query: 140 MGARDVASWTI--------MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
+ V S I +V+ + G + EA +F M KDV +WN M+AGY G
Sbjct: 251 LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGR 310
Query: 192 VGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNS 243
A LF+KM + D+ +W I+G A+ +QM + E T S
Sbjct: 311 FEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 244 IISVLIRNGLV---KEAHSYLEKYPY---SNIASWTNVIVG-----YFEMGEVGSAIKVF 292
++S G + KE H Y KYP N N+++ Y + +V +A +F
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMF 430
Query: 293 ELMTT--RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG--PSPDNATFTSVLTICSDL 348
+ ++ RDV W VMI G ++ + L+ +M E P+ T + L C+ L
Sbjct: 431 DSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASL 490
Query: 349 PTLDLGRQIHAQAIKIARNQFTT-VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
L +G+QIHA A++ +N VSN +I MYA+CG+I A L F ++ + ++W S+
Sbjct: 491 AALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSL 550
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
+ G HGY E+AL +F+ MR FK D +T + VL ACS++G++DQG YF+ MK +
Sbjct: 551 MTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFG 610
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
+ P HY C+VDLLGR G ++ A+ L+ E+ +E P VW A L CRIH +++GE
Sbjct: 611 VSPGPEHYACLVDLLGRAGRLNAALRLIEEMP---MEPPPVVWVAFLSCCRIHGKVELGE 667
Query: 528 IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGG 587
A E++ EL N+ G Y +L+ +Y + GR +D RI + M+ GVKK PGCSW++ G
Sbjct: 668 YAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGT 727
Query: 588 HVFLSGDSSHP 598
F GD +HP
Sbjct: 728 TTFFVGDKTHP 738
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 194/498 (38%), Gaps = 104/498 (20%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKD--VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
+++ + G + A L + P D V WN +I Y DNGC LF MH T
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
+ FK E +R G A S + + SN
Sbjct: 125 PDNYTFPFV------------FKACGEISS----------VRCGESAHALSLVTGF-ISN 161
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-K 327
+ ++ Y + A KVF+ M+ DV WN +I + + L+ F +M
Sbjct: 162 VFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTN 221
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
E G PDN T +VL C+ L T LG+Q+H A+ Q V N ++ MYA+CG +
Sbjct: 222 EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMD 281
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR------------------- 428
A FS++ + D++SWN+++ G + G E A+ LFE+M+
Sbjct: 282 EANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYA 341
Query: 429 ----------------LTDFKPDDITFVGVLSACSYAGLVDQG--------RYYFDCMKN 464
+ KP+++T + VLS C+ G + G +Y D KN
Sbjct: 342 QRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKN 401
Query: 465 KY----------------------------FLQPRS---AHYTCVVDLLGRFGLIDEAMN 493
+ L P+ +T ++ + G ++A+
Sbjct: 402 GHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 494 LLNEIRADGIEVSPTVW--GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTE 549
LL+E+ + + P + L AC +++G+ + + N +++ L +
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLID 521
Query: 550 MYLSCGRREDAKRIFAQM 567
MY CG DA+ +F M
Sbjct: 522 MYAKCGSISDARLVFDNM 539
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 137/324 (42%), Gaps = 44/324 (13%)
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV--WNVMIFGLG 311
VK H L + + +++I Y +G + A+ + D V WN +I G
Sbjct: 44 VKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+N + L F M +PDN TF V C ++ ++ G HA ++
Sbjct: 104 DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVF 163
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
V NA++ MY+RC ++ A F + + D++SWNSII A G + ALE+F RM +
Sbjct: 164 VGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT-NE 222
Query: 432 F--KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
F +PD+IT V VL C+ G G+ C + C+VD+ + G++D
Sbjct: 223 FGCRPDNITLVNVLPPCASLGTHSLGK-QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMD 281
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
EA + + + + W A+ +AG
Sbjct: 282 EANTVFSNMSVKDV----VSWNAM--------------VAG------------------- 304
Query: 550 MYLSCGRREDAKRIFAQMKENGVK 573
Y GR EDA R+F +M+E +K
Sbjct: 305 -YSQIGRFEDAVRLFEKMQEEKIK 327
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/550 (34%), Positives = 283/550 (51%), Gaps = 31/550 (5%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC 127
++ A +VFD + + WN+M GY N + + +F M DV+ NC
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMP---------NC 51
Query: 128 QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
+ + + +N L +EG V + A A L I Y
Sbjct: 52 FTFPV------------ILKSCVKINAL-KEGEEVHCFVIKSGFRANPFVATTL-IDMYA 97
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
G + A +F +M +R++ +W +ING + + A F PE WN++IS
Sbjct: 98 SGGAIHAAYRVFGEMIERNVIAWTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISG 157
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
I V A +K P ++ SW V+ GY G+V + ++FE M R+V WN +I
Sbjct: 158 YIEAKDVIRARELFDKMPNKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALI 217
Query: 308 FGLGENDLGEEGLKFFVQMKESGPS-PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
G N E L F +M G P++AT +VL+ C+ L LDLG+ +H A
Sbjct: 218 GGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGY 277
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
V NA++ MYA+CG +++AL F S+ D+ISWN+II GLA HG+ AL LF
Sbjct: 278 KGNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSH 337
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
M++ PD ITF+G+L AC++ GLV+ G YF M + Y + PR HY C+VDLLGR G
Sbjct: 338 MKIAGENPDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAG 397
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
L+ A++ IR IE +W ALLGACR++ N+++ E+A E+++E EP N Y++
Sbjct: 398 LLAHAVDF---IRKMPIEADAVIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVM 454
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK----FHR 602
L+ +Y GR +D R+ M++ G KK PGCS I++ND F S D HP+ +
Sbjct: 455 LSNIYGDFGRWKDVARLKVAMRDTGFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGT 514
Query: 603 LRYLLNLLHT 612
LR L LL +
Sbjct: 515 LRTLTKLLRS 524
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 215/457 (47%), Gaps = 35/457 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAG 61
++ A +FD++P+ + WN M RGY +N + + LF QM D+ FT+ ++
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 62 LMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
++ + ++ +EV G V ++I Y G I A RVF M ++V++
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVA-TTLIDMYASGGAIHAAYRVFGEMIERNVIA 119
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
W +I + C + A F RD+ W M++G + ++ AR+LFDKMP KDV
Sbjct: 120 WTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDV 179
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM--- 233
+WN ++ GY NG V E LF++M +R++ SW LI G + +S FK+M
Sbjct: 180 MSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVD 239
Query: 234 ----PETCEKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEV 285
P + T +++S R G L K H Y E + Y N ++ Y + G V
Sbjct: 240 GTVVPN--DATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVV 297
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
+A+ VF+ M +D+ WN +I GL + G + L F MK +G +PD TF +L C
Sbjct: 298 ETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCAC 357
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVS-----NAMITMYARCGNIQSALLEFSSVPIH- 399
+ + ++ G K + ++ V ++ + R G + A+ +PI
Sbjct: 358 THMGLVEDGFSY----FKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEA 413
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
D + W +++ + E A E +L +F+P +
Sbjct: 414 DAVIWAALLGACRVYKNVELAELALE--KLIEFEPKN 448
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 56/253 (22%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------P------- 48
N + + LF++MP+R+ +WN +I GY +NG + F +M P
Sbjct: 192 NGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVN 251
Query: 49 --------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
+ +++ N ++ + V+ A +VF M+ +D
Sbjct: 252 VLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKD 311
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAE---S 135
+++WN++I G +G +AL +F M + D +++ IG L C M L E S
Sbjct: 312 LISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITF---IGILCACTHMGLVEDGFS 368
Query: 136 YFKEMG-----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDN 189
YFK M + + +V+ L R G + A KMP + D W ++
Sbjct: 369 YFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGACRVY 428
Query: 190 GCVGVAEDLFQKM 202
V +AE +K+
Sbjct: 429 KNVELAELALEKL 441
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 276/521 (52%), Gaps = 32/521 (6%)
Query: 96 NGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGL 155
G +AL F MP +D +++ +I AL A VA + + +
Sbjct: 418 GGAPRDALAAFSAMPRRDSFTYSFLIKAL----------------SAAGVAPVRAVHSHV 461
Query: 156 VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
V+ G + +D N +I Y NG A +F +M +RD+ SW +
Sbjct: 462 VKLGSV------------EDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMA 509
Query: 216 GLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNV 275
+V + F +MPE +WN+I+ + G V+ A ++ P N+ SW+ +
Sbjct: 510 AMVREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTM 569
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ GY + G++ A +F+ M ++++ W +M+ + L +E K F QMKE+ D
Sbjct: 570 VSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDV 629
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
A S+L C++ +L LG++IH K + T V NA+I M+ +CG + A F +
Sbjct: 630 AAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDT 689
Query: 396 VPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+ D +SWNSII G A HG+ +KALELF +M+ F PD +T + VLSAC++ G VD+
Sbjct: 690 ETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDE 749
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
GR +F M+ Y + P+ HY C++DLLGR GLI EA++L+ + + EV +WG+LL
Sbjct: 750 GRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEV---IWGSLL 806
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
ACR+H N++ EIA + +L+P+N+G Y +L+ +Y G+ D + QMK G +K
Sbjct: 807 SACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQK 866
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
G SW+++N+ H F GD H ++ +++ L + ++
Sbjct: 867 TAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLSSHVK 907
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 205/431 (47%), Gaps = 28/431 (6%)
Query: 34 NGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM----EVRDVVTWNSM 89
G +A+ F+ MP RD FTY+ +I L + V + V + V D N++
Sbjct: 418 GGAPRDALAAFSAMPRRDSFTYSFLIKAL-SAAGVAPVRAVHSHVVKLGSVEDTFVGNAL 476
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
I Y NG +A +VF MP +DVVSWN + A+V + F EM +D SW
Sbjct: 477 IDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWN 536
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+++G + G + A +LF +MP ++V +W+ M++GY G + +A +F KM ++L +
Sbjct: 537 TILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVT 596
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPE-TCEKTWNSIISVLIRNG------LVKEAHSYLE 262
W +++ +D A F QM E + E +++S+L L K H Y+
Sbjct: 597 WTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVR 656
Query: 263 KYPYSNIASWTNVIVGYF-EMGEVGSAIKVFELMTT-RDVTVWNVMIFGLGENDLGEEGL 320
K N ++ F + G V A VF+ T +D WN +I G + G++ L
Sbjct: 657 KRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKAL 716
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMIT 378
+ F QMK+ G +PD T +VL+ C+ + +D GR+ H ++ + + MI
Sbjct: 717 ELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRR-HFSNMERDYGIMPQIEHYGCMID 775
Query: 379 MYARCGNIQSALLEFSSVP--IHDIISWNSIICGLAYHG---YAEKALELFERMRLTDFK 433
+ R G I+ A+ S+P +++I W S++ H YAE A+ L+ +
Sbjct: 776 LLGRGGLIKEAVDLIKSMPWEPNEVI-WGSLLSACRLHKNVEYAEIAVN-----ELSKLQ 829
Query: 434 PDDITFVGVLS 444
P + VLS
Sbjct: 830 PSNAGNYAVLS 840
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 13/273 (4%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N +A+ +FD+MP+RD V+WN + + G L LF++MPE+D ++NT++ G
Sbjct: 482 KNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDG 541
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
++ V+ A E+F M R+VV+W++M+SGY G ++ A +F MP K++V+W +++
Sbjct: 542 YTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMV 601
Query: 122 GALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLF----DKMPA 173
A +D A F +M DVA+ ++ G + +++ +
Sbjct: 602 SACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLG 661
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQ-KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+ N +I + GCV A+ +F + +D SW +I G D A+ F Q
Sbjct: 662 RSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQ 721
Query: 233 MPETC----EKTWNSIISVLIRNGLVKEAHSYL 261
M + T +++S G V E +
Sbjct: 722 MKQQGFNPDAVTMINVLSACTHMGFVDEGRRHF 754
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 148/286 (51%), Gaps = 22/286 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + + LFD+MP++DTV+WN ++ GY K G ++ A LF +MPER++ +++T+++
Sbjct: 512 VREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVS 571
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVS 116
G + +++ A+ +FD M +++VTW M+S GL+DEA ++F M DV +
Sbjct: 572 GYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAA 631
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFD-KM 171
++ A + L + + + R++ T + N L+ + G + A +FD +
Sbjct: 632 VVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTET 691
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAI 227
KD +WN +I G+ +G A +LF +M + D + +++ + +D
Sbjct: 692 VQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGR 751
Query: 228 SYFKQ-------MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
+F MP+ + + +I +L R GL+KEA ++ P+
Sbjct: 752 RHFSNMERDYGIMPQI--EHYGCMIDLLGRGGLIKEAVDLIKSMPW 795
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 307/578 (53%), Gaps = 18/578 (3%)
Query: 49 ERDMFTYNTVIAGLMQSD--NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF 106
E D T N ++A S N++ A+++F+ ++ + +N M+ Y G++ + L +F
Sbjct: 126 EGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLF 185
Query: 107 HGMP----LKDVVSWNLV---IGALVNCQRMDLAESYFKEMGAR-DVASWTIMVNGLVRE 158
+ D ++ V IG L + ++ + + + G D + +++
Sbjct: 186 QQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYEL 245
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH--------DRDLTSW 210
+ A+KLFD+M +D +WN+MI+GY+ A + F++M + + S
Sbjct: 246 SNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVST 305
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
L N D +Y ++ + N+++ + + G + A + ++ N+
Sbjct: 306 LSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVI 365
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
WT++I GY G++ A +F+ RDV +W MI G + ++ + F +M+
Sbjct: 366 CWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQK 425
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
PD T ++LT C+ L L+ G+ IH + V A+I MY++CG + +L
Sbjct: 426 IKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSL 485
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F + D SW SIICGLA +G +AL LF M KPDDITF+GVLSACS+ G
Sbjct: 486 EIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGG 545
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
LV++GR +F+ MK + ++P+ HY CV+DLLGR GL+DEA L+ EI + E+ ++
Sbjct: 546 LVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLY 605
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
GALL ACRIHNN+ +GE +++ +E +S ++ +L +Y S R EDAK++ +MKE
Sbjct: 606 GALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKEL 665
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
GVKK PGCS I+++ H FL GD SHP+ + +LN
Sbjct: 666 GVKKMPGCSLIEVDGIVHEFLVGDPSHPEMIEICSMLN 703
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 201/451 (44%), Gaps = 56/451 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------------- 50
++ A+ +F+ + +NVM++ Y K G L + LF Q+ E
Sbjct: 147 LRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKA 206
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
D + YN++I + NV+ AK++FD M RD V+W
Sbjct: 207 IGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSW 266
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLK--------DVVSWNLVIGALVNCQRMDLAESYFK 138
N MISGYV ++A+ F M + VVS AL N + D +Y +
Sbjct: 267 NVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVR 326
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+ +++ + G + AR +FD+M K+V W MI+GY++ G + A DL
Sbjct: 327 KELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDL 386
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWNSIISVLI---RNGLV 254
F K RD+ W +ING V D A++ F++M + + +++++L + G +
Sbjct: 387 FDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGAL 446
Query: 255 KEA---HSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
++ H YL++ + ++ T +I Y + G V ++++F + +D W +I GL
Sbjct: 447 EQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGL 506
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
N E L+ F +M+ G PD+ TF VL+ CS ++ GR+ K+ R +
Sbjct: 507 AMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPK 566
Query: 371 TVS-NAMITMYARCGNIQSALLEFSSVPIHD 400
+I + R G + A +PI +
Sbjct: 567 VEHYGCVIDLLGRAGLLDEAEELIQEIPIEN 597
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 134/309 (43%), Gaps = 51/309 (16%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----------DM 52
+ ++ A+ LFD+M RD+V+WNVMI GY + ++A+ F +M +
Sbjct: 246 SNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVST 305
Query: 53 FTYNTVIAGLMQSDNVQG----------------------------AKEVFDGMEVRDVV 84
+ T + L D + A+ +FD M +++V+
Sbjct: 306 LSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVI 365
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR- 143
W SMISGY+ G + EA +F P++DVV W +I V D A + F+EM +
Sbjct: 366 CWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQK 425
Query: 144 ---DVASWTIMVNGLVREGRIVEAR----KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
D + ++ G + G + + + L + DV +I Y GCV +
Sbjct: 426 IKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSL 485
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNG 252
++F ++ D+D SW +I GL + + A+ F +M K T+ ++S G
Sbjct: 486 EIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGG 545
Query: 253 LVKEAHSYL 261
LV+E +
Sbjct: 546 LVEEGRRFF 554
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 125/265 (47%), Gaps = 19/265 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
++EA++LFDK P RD V W MI GY + D+A+ LF +M + D FT T++ G
Sbjct: 380 LREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTG 439
Query: 62 LMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
Q ++ K + ++ DVV ++I Y G +D++L +F+ + KD SW
Sbjct: 440 CAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASW 499
Query: 118 NLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKLFDKMPA 173
+I L + A F EM GA+ D ++ +++ G + E R+ F+ M
Sbjct: 500 TSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKK 559
Query: 174 -----KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
V+ + +I G + AE+L Q++ + L L+++ RI +
Sbjct: 560 VHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVD 619
Query: 229 YFKQMPETCE--KTWNSIISVLIRN 251
+++ + E ++ +S I L+ N
Sbjct: 620 MGERLAKKLENIESCDSSIHTLLAN 644
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 307/578 (53%), Gaps = 18/578 (3%)
Query: 49 ERDMFTYNTVIAGLMQSD--NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF 106
E D T N ++A S N++ A+++F+ ++ + +N M+ Y G++ + L +F
Sbjct: 172 EGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLF 231
Query: 107 HGMP----LKDVVSWNLV---IGALVNCQRMDLAESYFKEMGAR-DVASWTIMVNGLVRE 158
+ D ++ V IG L + ++ + + + G D + +++
Sbjct: 232 QQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYEL 291
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH--------DRDLTSW 210
+ A+KLFD+M +D +WN+MI+GY+ A + F++M + + S
Sbjct: 292 SNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVST 351
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
L N D +Y ++ + N+++ + + G + A + ++ N+
Sbjct: 352 LSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVI 411
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
WT++I GY G++ A +F+ RDV +W MI G + ++ + F +M+
Sbjct: 412 CWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQR 471
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
PD T ++LT C+ L L+ G+ IH + V A+I MY++CG + +L
Sbjct: 472 VKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSL 531
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F + D SW SIICGLA +G +AL LF M KPDDITF+GVLSACS+ G
Sbjct: 532 EIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGG 591
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
LV++GR +F+ MK + ++P+ HY CV+DLLGR GL+DEA L+ EI + E+ ++
Sbjct: 592 LVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLY 651
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
GALL ACRIHNN+ +GE +++ +E +S ++ +L +Y S R EDAK++ +MKE
Sbjct: 652 GALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKEL 711
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
GVKK PGCS I+++ H FL GD SHP+ + +LN
Sbjct: 712 GVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLN 749
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 201/451 (44%), Gaps = 56/451 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------------- 50
++ A+ +F+ + +NVM++ Y K G L + LF Q+ E
Sbjct: 193 LRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKA 252
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
D + YN++I + NV+ AK++FD M RD V+W
Sbjct: 253 IGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSW 312
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLK--------DVVSWNLVIGALVNCQRMDLAESYFK 138
N MISGYV ++A+ F M + VVS AL N + D +Y +
Sbjct: 313 NVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVR 372
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+ +++ + G + AR +FD+M K+V W MI+GY++ G + A DL
Sbjct: 373 KELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDL 432
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWNSIISVLI---RNGLV 254
F K RD+ W +ING V D A++ F++M + + +++++L + G +
Sbjct: 433 FDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGAL 492
Query: 255 KEA---HSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
++ H YL++ + ++ T +I Y + G V ++++F + +D W +I GL
Sbjct: 493 EQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGL 552
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
N E L+ F +M+ G PD+ TF VL+ CS ++ GR+ K+ R +
Sbjct: 553 AMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPK 612
Query: 371 TVS-NAMITMYARCGNIQSALLEFSSVPIHD 400
+I + R G + A +PI +
Sbjct: 613 VEHYGCVIDLLGRAGLLDEAEELIQEIPIEN 643
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 134/309 (43%), Gaps = 51/309 (16%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----------DM 52
+ ++ A+ LFD+M RD+V+WNVMI GY + ++A+ F +M +
Sbjct: 292 SNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVST 351
Query: 53 FTYNTVIAGLMQSDNVQG----------------------------AKEVFDGMEVRDVV 84
+ T + L D + A+ +FD M +++V+
Sbjct: 352 LSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVI 411
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
W SMISGY+ G + EA +F P++DVV W +I V D A + F+EM +
Sbjct: 412 CWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQR 471
Query: 145 VA----SWTIMVNGLVREGRIVEAR----KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
V + ++ G + G + + + L + DV +I Y GCV +
Sbjct: 472 VKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSL 531
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNG 252
++F ++ D+D SW +I GL + + A+ F +M K T+ ++S G
Sbjct: 532 EIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGG 591
Query: 253 LVKEAHSYL 261
LV+E +
Sbjct: 592 LVEEGRRFF 600
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 125/265 (47%), Gaps = 19/265 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
++EA++LFDK P RD V W MI GY + D+A+ LF +M + D FT T++ G
Sbjct: 426 LREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTG 485
Query: 62 LMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
Q ++ K + ++ DVV ++I Y G +D++L +F+ + KD SW
Sbjct: 486 CAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASW 545
Query: 118 NLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKLFDKMPA 173
+I L + A F EM GA+ D ++ +++ G + E R+ F+ M
Sbjct: 546 TSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKK 605
Query: 174 -----KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
V+ + +I G + AE+L Q++ + L L+++ RI +
Sbjct: 606 VHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVD 665
Query: 229 YFKQMPETCE--KTWNSIISVLIRN 251
+++ + E ++ +S I L+ N
Sbjct: 666 MGERLAKKLENIESCDSSIHTLLAN 690
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 197/664 (29%), Positives = 316/664 (47%), Gaps = 75/664 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------- 48
N + +AQ LFD +PQ+D+V WNVM+ GY KNG NA+ +F +M
Sbjct: 105 ENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFAC 164
Query: 49 --------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
E D NT++A + +Q A+++FD + D
Sbjct: 165 VLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSD 224
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
+V+WN +ISGYV NGL+ EA +F GM + ++ + + C L+ + KE+
Sbjct: 225 LVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHG 284
Query: 143 R--------DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
DV + +++ + + A+K + + D MI+GY+ NG
Sbjct: 285 YIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKE 344
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A + F+ W LV R ++++ P + L L
Sbjct: 345 ALEAFR---------W------LVQERMKPTSVTFSSIFPA---------FAGLAALNLG 380
Query: 255 KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
KE H + K + I+ Y + G + A +VF +T +D WN MI +N
Sbjct: 381 KELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQN 440
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
E + F QM G D + + L+ C++LP L G++IH IK
Sbjct: 441 GRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAE 500
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
+++I MYA+CGN+ + F + + +SWNSII HG ++ L LF M +
Sbjct: 501 SSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQ 560
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
PD +TF+G++SAC +AG VD+G Y+ M +Y + R HY CV D+ GR G + EA
Sbjct: 561 PDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFE 620
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
+N + VWG LLGAC IH N+++ E+A + + +L+P NSG Y++L +
Sbjct: 621 TINSMP---FPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAG 677
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
G+ ++ + MKE GV+K PG SWI++N+ H+F++ D SHP ++ +L+ L E
Sbjct: 678 AGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLE 737
Query: 614 IERE 617
+++E
Sbjct: 738 LKKE 741
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 148/646 (22%), Positives = 274/646 (42%), Gaps = 116/646 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER---- 50
+R +++A+NLF + T WN MIRG+ G + A+ + +M P++
Sbjct: 3 VRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFP 62
Query: 51 -----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
D+F +++I ++ ++ A+ +FD + +
Sbjct: 63 YVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQK 122
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYF 137
D V WN M++GYV NG A+++F M ++ V++ V+ + +DL
Sbjct: 123 DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLH 182
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ + + N L+ + + ARKLFD +P D+ +WN +I+GY+ NG +G
Sbjct: 183 GIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMG 242
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
AE LF+ G++++ +I++ +P ++ L+
Sbjct: 243 EAEHLFR---------------GMISAGIKPDSITFASFLP---------CVNELLSLKH 278
Query: 254 VKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
KE H Y+ ++ ++ + +I YF+ +V A K ++ D V MI G
Sbjct: 279 CKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVL 338
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N +E L+ F + + P + TF+S+ + L L+LG+++H IK ++ V
Sbjct: 339 NGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHV 398
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+A++ MYA+CG + A F+ + D I WNS+I + +G +A+ LF +M +
Sbjct: 399 GSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGT 458
Query: 433 KPDDITFVGVLSACS----------YAGLVDQG-------------------------RY 457
+ D ++ G LSAC+ GL+ +G R
Sbjct: 459 RYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRR 518
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
FD M+ K + ++ G G + E + L +E+ +GI+ + ++ AC
Sbjct: 519 VFDRMQEK-----NEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISAC 573
Query: 518 RIHNNIKVGEIAGERVMELE---PNNSGVYLILTEMYLSCGRREDA 560
+ G I +M E P Y + +M+ GR +A
Sbjct: 574 GHAGQVDEG-IRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEA 618
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y G + A +F + + WN MI G L F+++M +G SPD TF
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
V+ C L ++ +G+ +H + + V +++I +YA G++ A F ++P
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
D + WN ++ G +G + A+++F MR ++ KP+ +TF VLS C+ ++D G
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 264/482 (54%), Gaps = 9/482 (1%)
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKM----PAKDVQAWNLMIAGYLDNGCVGVA 195
M RD +++ ++ L G + R + + +D N +I Y NG A
Sbjct: 1 MPRRDSFTYSFLIKALSAAG-VAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDA 59
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
+F +M +RD+ SW + +V + F +MPE +WN+I+ + G V+
Sbjct: 60 RKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVE 119
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
A ++ P N+ SW+ ++ GY + G++ A +F+ M ++++ W +M+ + L
Sbjct: 120 AAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGL 179
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
+E K F QMKE+ D A S+L C++ +L LG++IH K + T V NA
Sbjct: 180 VDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNA 239
Query: 376 MITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
+I M+ +CG + A F + + D +SWNSII G A HG+ +KALELF +M+ F P
Sbjct: 240 LIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNP 299
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
D +T + VLSAC++ G VD+GR +F M+ Y + P+ HY C++DLLGR GLI EA++L
Sbjct: 300 DAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDL 359
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
+ + + EV +WG+LL ACR+H N++ EIA + +L+P+N+G Y +L+ +Y
Sbjct: 360 IKSMPWEPNEV---IWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEA 416
Query: 555 GRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
G+ D + QMK G +K G SW+++N+ H F GD H ++ +++ L + +
Sbjct: 417 GQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLSSHV 476
Query: 615 ER 616
+
Sbjct: 477 KH 478
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 197/417 (47%), Gaps = 26/417 (6%)
Query: 47 MPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEA 102
MP RD FTY+ +I L + V + V + V D N++I Y NG +A
Sbjct: 1 MPRRDSFTYSFLIKAL-SAAGVAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDA 59
Query: 103 LRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIV 162
+VF MP +DVVSWN + A+V + F EM +D SW +++G + G +
Sbjct: 60 RKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVE 119
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
A +LF +MP ++V +W+ M++GY G + +A +F KM ++L +W +++
Sbjct: 120 AAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGL 179
Query: 223 IDAAISYFKQMPE-TCEKTWNSIISVLIRNG------LVKEAHSYLEKYPYSNIASWTNV 275
+D A F QM E + E +++S+L L K H Y+ K N
Sbjct: 180 VDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNA 239
Query: 276 IVGYF-EMGEVGSAIKVFELMTT-RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++ F + G V A VF+ T +D WN +I G + G++ L+ F QMK+ G +P
Sbjct: 240 LIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNP 299
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALL 391
D T +VL+ C+ + +D GR+ H ++ + + MI + R G I+ A+
Sbjct: 300 DAVTMINVLSACTHMGFVDEGRR-HFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVD 358
Query: 392 EFSSVPIH-DIISWNSIICGLAYHG---YAEKALELFERMRLTDFKPDDITFVGVLS 444
S+P + + W S++ H YAE A+ L+ +P + VLS
Sbjct: 359 LIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVN-----ELSKLQPSNAGNYAVLS 410
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 123/243 (50%), Gaps = 9/243 (3%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N +A+ +FD+MP+RD V+WN + + G L LF++MPE+D ++NT++ G
Sbjct: 52 KNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDG 111
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
++ V+ A E+F M R+VV+W++M+SGY G ++ A +F MP K++V+W +++
Sbjct: 112 YTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMV 171
Query: 122 GALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLF----DKMPA 173
A +D A F +M DVA+ ++ G + +++ +
Sbjct: 172 SACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLG 231
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQ-KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+ N +I + GCV A+ +F + +D SW +I G D A+ F Q
Sbjct: 232 RSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQ 291
Query: 233 MPE 235
M +
Sbjct: 292 MKQ 294
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 148/286 (51%), Gaps = 22/286 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + + LFD+MP++DTV+WN ++ GY K G ++ A LF +MPER++ +++T+++
Sbjct: 82 VREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVS 141
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVS 116
G + +++ A+ +FD M +++VTW M+S GL+DEA ++F M DV +
Sbjct: 142 GYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAA 201
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFD-KM 171
++ A + L + + + R++ T + N L+ + G + A +FD +
Sbjct: 202 VVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTET 261
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAI 227
KD +WN +I G+ +G A +LF +M + D + +++ + +D
Sbjct: 262 VQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGR 321
Query: 228 SYFKQ-------MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
+F MP+ + + +I +L R GL+KEA ++ P+
Sbjct: 322 RHFSNMERDYGIMPQI--EHYGCMIDLLGRGGLIKEAVDLIKSMPW 365
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 199/647 (30%), Positives = 323/647 (49%), Gaps = 82/647 (12%)
Query: 6 IQEAQNLFDKMPQ-RDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIA 60
+ EA+ +FD+ + R+ V+WN M+ + KN +A+ LF +M + F ++ V+
Sbjct: 151 VDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVN 210
Query: 61 GLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
S +++ ++V M VR DV T N+++ Y G I A VF +P DVV
Sbjct: 211 ACTGSRDLEAGRKVH-AMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVV 269
Query: 116 SWNLVIGA-------------LVNCQRMDLAESYFK---------------EMGARDVAS 147
SWN I L+ + L + F R +
Sbjct: 270 SWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHG 329
Query: 148 WTI-------------MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ I +V+ + G + +ARK+F+ +P KD+ WN +I+G GC G
Sbjct: 330 FMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGE 389
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
+ LF +M + + ++ S AIS Q+ EK G +
Sbjct: 390 SLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKI-----------GFL 438
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
++H +I Y++ + A KVFE ++ ++ + MI L + D
Sbjct: 439 SDSHVV------------NGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCD 486
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV-- 372
GE+ +K F++M G PD +S+L C+ L + G+Q+HA IK R T V
Sbjct: 487 HGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK--RKFMTDVFA 544
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
NA++ YA+CG+I+ A L FS +P ++SW+++I GLA HG+ ++AL++F RM
Sbjct: 545 GNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERI 604
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
P+ IT VL AC++AGLVD+ + YF MK + + HY+C++DLLGR G +D+AM
Sbjct: 605 APNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAM 664
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
L+N + E + VWGALL A R+H + ++G++A E++ LEP SG +++L Y
Sbjct: 665 ELVNSM---PFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYA 721
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
S G ++ ++ MK++ VKKEP SW+++ D H F+ GD SHP+
Sbjct: 722 SAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPR 768
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 148/604 (24%), Positives = 257/604 (42%), Gaps = 66/604 (10%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ +FD+ P V+W+ ++ Y N A+ F M R + + +++
Sbjct: 56 ARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPD 115
Query: 69 QG------AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-HGMPLKDVVSWNLVI 121
G A V G+ D+ N++++ Y G +DEA RVF ++ VSWN ++
Sbjct: 116 AGLGVQVHAVAVSTGLS-GDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMM 174
Query: 122 GALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGL-----VREGRIVEA---RKLFD 169
A V R A F EM G R + ++ +VN + GR V A R +D
Sbjct: 175 SAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYD 234
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
KDV N ++ Y G + +A +F K+ D+ SW I+G V A+
Sbjct: 235 ----KDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALEL 290
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVK--------------EAHSYLEKY-----PYSNIA 270
QM K+ + +V + ++K + H ++ K Y +A
Sbjct: 291 LLQM-----KSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVA 345
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
++ Y + G + A KVFE + +D+ +WN +I G E L F +M++ G
Sbjct: 346 ----LVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEG 401
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
+ T +VL + L + Q+HA A KI + V N +I Y +C ++ A
Sbjct: 402 SDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYAN 461
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F +II++ S+I L+ + E A++LF M +PD +L+AC+
Sbjct: 462 KVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 521
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
+QG+ + + F+ A +V + G I++A + + G+ W
Sbjct: 522 AYEQGKQVHAHLIKRKFMTDVFAG-NALVYTYAKCGSIEDADLAFSGLPDKGV----VSW 576
Query: 511 GALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYLILTEMYLSC---GRREDAKRIFA 565
A++G H + K R+++ + PN ++ LT + +C G ++AK F+
Sbjct: 577 SAMIGGLAQHGHGKRALDVFRRMVDERIAPN----HITLTSVLCACNHAGLVDEAKGYFS 632
Query: 566 QMKE 569
MKE
Sbjct: 633 SMKE 636
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 133/553 (24%), Positives = 231/553 (41%), Gaps = 86/553 (15%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQR- 129
A+ VFD V+W+S+++ Y N L EAL F M + V + ++ C
Sbjct: 56 ARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPD 115
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVRE----GRIVEARKLFDKMPAKDVQA--WNLMI 183
L + ++ + N LV G + EAR++FD+ A+D A WN M+
Sbjct: 116 AGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDE-AARDRNAVSWNGMM 174
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
+ ++ N A +LF +M + + ++N SR ++A
Sbjct: 175 SAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAG------------- 221
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTR 298
+ ++++R G K+ + N +V Y ++G++ A VF +
Sbjct: 222 --RKVHAMVVRTGYDKDVFT-------------ANALVDMYSKLGDIHMAALVFGKVPKT 266
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG--RQ 356
DV WN I G + + L+ +QMK SG P+ T +S+L C+ RQ
Sbjct: 267 DVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQ 326
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
IH IK + + A++ MYA+ G + A F +P D++ WN++I G ++ G
Sbjct: 327 IHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGC 386
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACS--------------------------YAG 450
++L LF RMR + T VL + + G
Sbjct: 387 HGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNG 446
Query: 451 LVDQGRYYFDCMK--NKYFLQPRSAH---YTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
L+D + +C++ NK F + S + +T ++ L + ++A+ L E+ G+E
Sbjct: 447 LIDS-YWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEP 505
Query: 506 SPTVWGALLGACRIHNNIKVGE------IAGERVMELEPNNSGVYLILTEMYLSCGRRED 559
P V +LL AC + + G+ I + + ++ N+ VY Y CG ED
Sbjct: 506 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVY-----TYAKCGSIED 560
Query: 560 AKRIFAQMKENGV 572
A F+ + + GV
Sbjct: 561 ADLAFSGLPDKGV 573
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 192/472 (40%), Gaps = 80/472 (16%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N +++ Y G A +F + D SW L+ N+ A++ F+ M +
Sbjct: 41 NHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVR 100
Query: 240 TWNSIISVLIR----NGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVF-E 293
+ ++++ GL + H+ S N +V Y G V A +VF E
Sbjct: 101 CNEFALPIVLKCAPDAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDE 160
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
R+ WN M+ +ND + ++ F +M SG P+ F+ V+ C+ L+
Sbjct: 161 AARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEA 220
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
GR++HA ++ ++ +NA++ MY++ G+I A L F VP D++SWN+ I G
Sbjct: 221 GRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVL 280
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVL----------------------SACS---- 447
HG+ + ALEL +M+ + P+ T +L AC+
Sbjct: 281 HGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDD 340
Query: 448 ---------YA--GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
YA GL+D R F+ + K L + ++ G E+++L
Sbjct: 341 YIGVALVDMYAKYGLLDDARKVFEWIPRKDLLL-----WNALISGCSHGGCHGESLSLFC 395
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNI-----------KVGEIAGERVME---------- 535
+R +G +++ T A+L + I K+G ++ V+
Sbjct: 396 RMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCN 455
Query: 536 --------LEPNNSGVYLILTEMYLS---CGRREDAKRIFAQMKENGVKKEP 576
E ++S + T M + C EDA ++F +M G++ +P
Sbjct: 456 CLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDP 507
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 271/489 (55%), Gaps = 15/489 (3%)
Query: 133 AESYFKEMGARDVASWTIMVNGLVR---EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
AE F + ++ ++ G + GR+ +AR+LFD +P D ++N +++ +
Sbjct: 26 AEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFAC 85
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI 249
G + A +F M RD+TSW +++GL + I+ A + F+ MP +WN++++
Sbjct: 86 GDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARA 145
Query: 250 RNGLVKEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+G + A + P A WT ++ GY + G V A++ F M R++ WN ++
Sbjct: 146 SSGDMGAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVA 205
Query: 309 GLGENDLGEEGLKFFVQMKESG-PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
G +N + L+ F M E P+ +T +SVL CS+L L GRQ+H +K+
Sbjct: 206 GYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLG 265
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
+ TV ++++MY +CG++ A F + DI++WN++I G A HG KA++LFE+M
Sbjct: 266 RSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKM 325
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
+ PD IT + VL+AC + GL D G F+ M+ Y ++P+ HY+C+VDLL R GL
Sbjct: 326 KDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGL 385
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLIL 547
++ A+N+++ + E P+ +G LL ACR++ N++ E A +++E +P N+G Y+ L
Sbjct: 386 LERAVNMIHSM---PFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQL 442
Query: 548 TEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
+Y R +D R+ MK+N V K PG SW++I H F S D HP+ L
Sbjct: 443 ANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQ-------L 495
Query: 608 NLLHTEIER 616
+L+H +++R
Sbjct: 496 DLIHDKLDR 504
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 195/397 (49%), Gaps = 31/397 (7%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKN---GFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
A+ F + T T+N ++ GY K G L +A LF+ +P D +YNT+++
Sbjct: 26 AEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFAC 85
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
++ GA VF M VRDV +WN+M+SG NG I+EA +F MP ++ VSWN ++ A
Sbjct: 86 GDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARA 145
Query: 126 NCQRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
+ M AE+ F+ + D WT MV+G + G + +A + F MP +++ +WN ++A
Sbjct: 146 SSGDMGAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVA 205
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI 244
GY+ N G A +F+ M V + S + C S
Sbjct: 206 GYVKNSRAGDALRVFKTM---------------VEDAIVQPNPSTLSSVLLGC-----SN 245
Query: 245 ISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+S L G ++ H + K P +I T+++ Y + G++ A K+F+ M T+D+ W
Sbjct: 246 LSAL---GFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAW 302
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
N MI G ++ G + +K F +MK+ G PD T +VLT C D G Q + ++
Sbjct: 303 NAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCF-ETMQ 361
Query: 364 IARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPI 398
A N V + M+ + R G ++ A+ S+P
Sbjct: 362 EAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPF 398
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+ +A LFD+M +D V WN MI GY ++G A+ LF +M + D T V+
Sbjct: 284 LDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTA 343
Query: 62 LMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCN-GLIDEALRVFHGMPLK 112
+ + + F+ M+ + V S + +C GL++ A+ + H MP +
Sbjct: 344 CIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFE 399
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 198/639 (30%), Positives = 343/639 (53%), Gaps = 57/639 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----------- 50
RN + +EA NLF + + + T G + L CLF+++ +
Sbjct: 69 RNDQNKEALNLFLGLRRSGSPT-----DGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGF 123
Query: 51 --DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
D+ +++ M++++V+ + VFD M V++VV+W S+++GY NGL ++AL++F
Sbjct: 124 VEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQ 183
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASW---TI-----MVNGLVREGR 160
M L+ + A++ D A ++ + S TI MVN +
Sbjct: 184 MQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLM 243
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ +A+ +FD M ++ +WN MIAG++ NG A +LF +M + + + ++
Sbjct: 244 VSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKL 303
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
+S+ KQ+ C+ +I+NG ++ T ++V Y
Sbjct: 304 CANIKEMSFAKQLH--CQ---------VIKNG------------SDFDLNIKTALMVAYS 340
Query: 281 EMGEVGSAIKVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMK-ESGPSPDNATF 338
+ E+ A K+F +M ++V W +I G +N + + F QM+ E G P+ TF
Sbjct: 341 KCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTF 400
Query: 339 TSVLTICSDLPT--LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
+SVL C+ PT ++ G+Q H+ +IK + VS+A++TMYA+ GNI+SA F
Sbjct: 401 SSVLNACA-APTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ 459
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
D++SWNS+I G A HG +K+L++FE MR + + D ITF+GV+SAC++AGLV++G+
Sbjct: 460 VDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQ 519
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
YFD M Y + P HY+C+VDL R G++++AM+L+N++ T+W LL A
Sbjct: 520 RYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKM---PFPAGATIWRTLLAA 576
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
CR+H N+++GE+A E+++ L+P +S Y++L+ +Y + G ++ ++ M VKKE
Sbjct: 577 CRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEA 636
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
G SWI++ + F++GD SHP+ R+ L L ++
Sbjct: 637 GYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLK 675
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 202/465 (43%), Gaps = 73/465 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
M+ +++ + +FD+M ++ V+W ++ GY +NG + A+ LF+QM + + FT+
Sbjct: 138 MKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFA 197
Query: 57 TVIAGLM-----------------------------------QSDNVQGAKEVFDGMEVR 81
V+ GL +S V AK VFD ME R
Sbjct: 198 AVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENR 257
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESY- 136
+ V+WNSMI+G+V NGL EA +F+ M L+ V + VI N + M A+
Sbjct: 258 NAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLH 317
Query: 137 ---FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA-KDVQAWNLMIAGYLDNGCV 192
K D+ T ++ + I +A KLF M ++V +W +I+GY+ NG
Sbjct: 318 CQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRT 377
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A +LF +M + + F + C S + G
Sbjct: 378 DRAMNLFCQMRREEGVEPNEFT---------------FSSVLNACAAPTAS-----VEQG 417
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
K+ HS K +SN ++ +V Y + G + SA +VF+ RD+ WN MI G
Sbjct: 418 --KQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYA 475
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
++ G++ LK F +M+ D TF V++ C+ ++ G++ +K T
Sbjct: 476 QHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTM 535
Query: 372 VS-NAMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYH 414
+ M+ +Y+R G ++ A+ + +P + W +++ H
Sbjct: 536 EHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 580
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/489 (33%), Positives = 268/489 (54%), Gaps = 12/489 (2%)
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD-- 188
D A F E+ + WT +++G V + EA LF +M + + N I+ L
Sbjct: 52 DYAHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKAL 111
Query: 189 ------NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN 242
G V F +M ++D+ SW +I+G N+ R+D A +F +MPE +W
Sbjct: 112 ARLTRFKGGQAVYGFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWT 171
Query: 243 SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK-VFELMTTRDVT 301
S+I ++ G + EA + P ++ASW ++ GY ++G+ + + +F+ M +++
Sbjct: 172 SMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLV 231
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
W+ MI G N + L+ F + KE PD +++ CS L +D I
Sbjct: 232 TWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNY 291
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
+ + V ++I MYA+CG+I+ AL F D++ ++++I LA HG A+
Sbjct: 292 VGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAI 351
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
LF++M+ + KPD +TF+GVL+AC++ GLVD+GR YF M ++ +QP HY CVVDL
Sbjct: 352 FLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDL 411
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LGR G ++EA NL IR I VWGALL ACR+H N+++ E+A + ++EP+NS
Sbjct: 412 LGRVGCLEEAYNL---IRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNS 468
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFH 601
G Y++L+ +Y + GR ++ A+++E+ V+K G SWI+++ H F+ GD SH
Sbjct: 469 GNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSD 528
Query: 602 RLRYLLNLL 610
+ +L LL
Sbjct: 529 SISLILYLL 537
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/441 (29%), Positives = 214/441 (48%), Gaps = 56/441 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLMQ 64
A +FD++ Q + W +I GY +N D A LF QM + FT ++V+ L +
Sbjct: 54 AHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALAR 113
Query: 65 SDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
+G + V FD M +D+V+WN MISGY N +D A + F MP ++VVSW +
Sbjct: 114 LTRFKGGQAVYGFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSM 173
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVE-ARKLFDKMPAKDVQAW 179
I V M A+ F M +D+ASW +MV+G + G AR LFD+MP K++ W
Sbjct: 174 ICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTW 233
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR----IDAAISYFKQMPE 235
+ MI GY NG A +LF++ ++D+ + I G++++ IDAA
Sbjct: 234 STMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAA--------- 284
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
SII H+Y+ S++ +T++I Y + G + A+++FE+
Sbjct: 285 ------ESII------------HNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMA 326
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+D+ ++ MI L + LG + + F +M+ + PD+ TF VLT C+ +D GR
Sbjct: 327 HPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGR 386
Query: 356 QIHAQ-----AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI--HDIISWNSII 408
+ Q I+ + + V + + R G ++ A ++PI H ++ W +++
Sbjct: 387 KYFKQMTEEFGIQPSEKHYACV----VDLLGRVGCLEEAYNLIRNMPIAPHSVV-WGALL 441
Query: 409 CGLAYHGYAE----KALELFE 425
H + A ELF+
Sbjct: 442 AACRVHCNVQLAEVAAAELFK 462
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 146/281 (51%), Gaps = 18/281 (6%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
N R+ A+ FD+MP+R+ V+W MI GY K G + A LF+ MP +D+ ++N +++G
Sbjct: 149 NDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGY 208
Query: 63 MQ-SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLV 120
M D GA+ +FD M ++++VTW++MI GY NG +AL +F +D+ +
Sbjct: 209 MDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFI 268
Query: 121 IGALVNCQRM---DLAES----YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
+G + C ++ D AES Y D+ +T +++ + G I +A ++F+
Sbjct: 269 LGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHP 328
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISY 229
KD+ ++ MIA ++G A LF KM D ++ ++ + +D Y
Sbjct: 329 KDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKY 388
Query: 230 FKQMPE-----TCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
FKQM E EK + ++ +L R G ++EA++ + P
Sbjct: 389 FKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMP 429
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 196/647 (30%), Positives = 314/647 (48%), Gaps = 82/647 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I A LFD+M QR+T +W V+I G +NG + F +M + +F +G++Q
Sbjct: 121 IDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQI 180
Query: 66 ---------------------------------------DNVQGAKEVFDGMEVRDVVTW 86
++ + +VF+ M +VV+W
Sbjct: 181 CIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSW 240
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDV-------VSWNLVIGALVNCQRMDLAESYFKE 139
N+MI+G+ N L +A +F M + V + IG L + + Y E
Sbjct: 241 NAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALE 300
Query: 140 MGARDVASWTIMVNGLV----REGRIVEARKLFDK--MPAKDVQAWNLMIAGYLDNGCVG 193
+G V S T++ L+ + G + EAR +F+ + + WN MI+GYL +G
Sbjct: 301 LG---VDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNE 357
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A +LF KM D+ + N AI+ K C + + I++GL
Sbjct: 358 KALELFAKMCQNDIYLDHYTYCSVFN------AIAALK-----CLSLGKKVHARAIKSGL 406
Query: 254 VKEAHSYLEKYPYSNIASWTNVIV-GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
N S +N + Y + G + KVF M RD+ W ++ +
Sbjct: 407 ------------EVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQ 454
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
++ ++ F M+ G +P+ TF+SVL C++L L+ G+Q+H K+ + +
Sbjct: 455 CSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCI 514
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+A++ MYA+CG + A F+ + D +SW +II G A HG + AL+LF RM
Sbjct: 515 ESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGV 574
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
+P+ +TF+ VL ACS+ GLV++G YF MK Y L P HY C+VDLL R G +++AM
Sbjct: 575 EPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAM 634
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
++ + +E + VW LLGACR+H N+++GE+A ++++ + NS Y++L+ Y+
Sbjct: 635 EFISRMP---VEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYI 691
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
G +D + MKE GVKKEPGCSWI +N H F +GD HP+
Sbjct: 692 ESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPE 738
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 161/356 (45%), Gaps = 45/356 (12%)
Query: 255 KEAHSYLEKYPYSNIASWT---NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
K H +L K +SN S +V Y + ++ +A ++F+ M+ R+ W V+I GL
Sbjct: 88 KTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLA 147
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
EN L +G +FF +M+ G PD ++ +L IC L +++LG +HAQ + T
Sbjct: 148 ENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTF 207
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
VS A++ MYA+ I+ + F+++ +++SWN++I G + A +LF RM
Sbjct: 208 VSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEG 267
Query: 432 FKPDDITFVGVLSAC-----------------------------------SYAGLVDQGR 456
PD TF+GV A S G + + R
Sbjct: 268 VTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEAR 327
Query: 457 YYFDCMKNKYFLQPR-SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
F N +F+ R +A + ++ R G ++A+ L ++ + I + + ++
Sbjct: 328 SIF----NSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFN 383
Query: 516 ACRIHNNIKVGEIAGERVME--LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
A + +G+ R ++ LE N + + Y CG ED +++F +M++
Sbjct: 384 AIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMED 439
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 196/647 (30%), Positives = 314/647 (48%), Gaps = 82/647 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I A LFD+M QR+T +W V+I G +NG + F +M + +F +G++Q
Sbjct: 121 IDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQI 180
Query: 66 ---------------------------------------DNVQGAKEVFDGMEVRDVVTW 86
++ + +VF+ M +VV+W
Sbjct: 181 CIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSW 240
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDV-------VSWNLVIGALVNCQRMDLAESYFKE 139
N+MI+G+ N L +A +F M + V + IG L + + Y E
Sbjct: 241 NAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALE 300
Query: 140 MGARDVASWTIMVNGLV----REGRIVEARKLFDK--MPAKDVQAWNLMIAGYLDNGCVG 193
+G V S T++ L+ + G + EAR +F+ + + WN MI+GYL +G
Sbjct: 301 LG---VDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNE 357
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A +LF KM D+ + N AI+ K C + + I++GL
Sbjct: 358 KALELFAKMCQNDIYLDHYTYCSVFN------AIAALK-----CLSLGKKVHARAIKSGL 406
Query: 254 VKEAHSYLEKYPYSNIASWTNVIV-GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
N S +N + Y + G + KVF M RD+ W ++ +
Sbjct: 407 ------------EVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQ 454
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
++ ++ F M+ G +P+ TF+SVL C++L L+ G+Q+H K+ + +
Sbjct: 455 CSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCI 514
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+A++ MYA+CG + A F+ + D +SW +II G A HG + AL+LF RM
Sbjct: 515 ESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGV 574
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
+P+ +TF+ VL ACS+ GLV++G YF MK Y L P HY C+VDLL R G +++AM
Sbjct: 575 EPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAM 634
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
++ + +E + VW LLGACR+H N+++GE+A ++++ + NS Y++L+ Y+
Sbjct: 635 EFISRMP---VEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYI 691
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
G +D + MKE GVKKEPGCSWI +N H F +GD HP+
Sbjct: 692 ESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPE 738
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 161/356 (45%), Gaps = 45/356 (12%)
Query: 255 KEAHSYLEKYPYSNIASWT---NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
K H +L K +SN S +V Y + ++ +A ++F+ M+ R+ W V+I GL
Sbjct: 88 KTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLA 147
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
EN L +G +FF +M+ G PD ++ +L IC L +++LG +HAQ + T
Sbjct: 148 ENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTF 207
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
VS A++ MYA+ I+ + F+++ +++SWN++I G + A +LF RM
Sbjct: 208 VSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEG 267
Query: 432 FKPDDITFVGVLSAC-----------------------------------SYAGLVDQGR 456
PD TF+GV A S G + + R
Sbjct: 268 VTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEAR 327
Query: 457 YYFDCMKNKYFLQPR-SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
F N +F+ R +A + ++ R G ++A+ L ++ + I + + ++
Sbjct: 328 SIF----NSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFN 383
Query: 516 ACRIHNNIKVGEIAGERVME--LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
A + +G+ R ++ LE N + + Y CG ED +++F +M++
Sbjct: 384 AIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMED 439
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 190/618 (30%), Positives = 327/618 (52%), Gaps = 32/618 (5%)
Query: 9 AQNLFDK--MPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGL 62
A+ LFD M + DTV+WN +I + G A+ LF +M E + +T+ + G+
Sbjct: 199 ARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGV 258
Query: 63 MQSD------NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+ GA V DV N++I+ Y G +++A RVF M +D VS
Sbjct: 259 EDPSFVKLGMGIHGA--VLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVS 316
Query: 117 WNLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKLFDKMP 172
WN ++ LV + A +YF++M G + D S ++ R G +++ +++
Sbjct: 317 WNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAI 376
Query: 173 A----KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
++Q N ++ Y CV F+ MH++DL SW +I G + AI+
Sbjct: 377 RNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAIN 436
Query: 229 YFKQMPETCEKTWNSIISVLIR--NGL-----VKEAHSYLEKYPYSNIASWTNVIVGYFE 281
F+++ +I ++R +GL ++E H Y+ K ++I ++ Y E
Sbjct: 437 LFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGE 496
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
+G + A + FE + ++D+ W MI N L E L+ F +K++ PD+ S
Sbjct: 497 VGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISA 556
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L+ ++L +L G++IH I+ ++++++ MYA CG ++++ F SV D+
Sbjct: 557 LSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDL 616
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
I W S+I HG KA+ LF++M + PD ITF+ +L ACS++GL+ +G+ +F+
Sbjct: 617 ILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEI 676
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
MK Y L+P HY C+VDLL R ++EA + +R I+ S +W ALLGAC IH+
Sbjct: 677 MKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHF---VRNMPIKPSSEIWCALLGACHIHS 733
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
N ++GE+A + +++ + NSG Y +++ ++ + GR D + + +MK NG+KK PGCSWI
Sbjct: 734 NKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWI 793
Query: 582 QINDGGHVFLSGDSSHPK 599
++++ H F++ D SHP+
Sbjct: 794 EVDNKIHTFMARDKSHPQ 811
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/543 (23%), Positives = 226/543 (41%), Gaps = 96/543 (17%)
Query: 67 NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-------------------- 106
+++ A +VFD M R + +WN+++ +V +G EA+ ++
Sbjct: 94 SLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLK 153
Query: 107 --------------HGMPLKD-----VVSWNLVIGALVNCQRMDLAESYFKE--MGARDV 145
HG+ +K V N +I C + A F M D
Sbjct: 154 ACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDT 213
Query: 146 ASWTIMVNGLVREGRIVEARKLFDKM---------------------PA----------- 173
SW +++ V EG +EA LF +M P+
Sbjct: 214 VSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGA 273
Query: 174 -------KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
DV N +IA Y G + A +F+ M RD SW L++GLV + A
Sbjct: 274 VLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDA 333
Query: 227 ISYFKQMPETCEKTWN-SIISVLIRNGLV------KEAHSYLEKYPY-SNIASWTNVIVG 278
++YF+ M + +K S+++++ +G KE H+Y + SN+ ++
Sbjct: 334 LNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDM 393
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + V FE M +D+ W +I G +N+ E + F +++ G D
Sbjct: 394 YAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMI 453
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
SVL CS L + + R+IH K + NA++ +Y G+I A F S+
Sbjct: 454 GSVLRACSGLKSRNFIREIHGYVFKRDLADI-MLQNAIVNVYGEVGHIDYARRAFESIRS 512
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
DI+SW S+I ++G +ALELF ++ T+ +PD I + LSA + + +G+
Sbjct: 513 KDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEI 572
Query: 459 FDCMKNK-YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ K +FL+ A + +VD+ G ++ + + + ++ + +W +++ A
Sbjct: 573 HGFLIRKGFFLEGPIA--SSLVDMYACCGTVENSRKMFHSVKQRDL----ILWTSMINAN 626
Query: 518 RIH 520
+H
Sbjct: 627 GMH 629
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/527 (23%), Positives = 226/527 (42%), Gaps = 60/527 (11%)
Query: 97 GLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV 156
G + +A++VF M + + SWN ++GA V+ + A +K+M VA ++
Sbjct: 93 GSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVL 152
Query: 157 REGRIVEARKLFDKMPAKDVQA--------WNLMIAGYLDNGCVGVAEDLFQK--MHDRD 206
+ + +L ++ V+ N +IA Y G +G A LF M D
Sbjct: 153 KACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKED 212
Query: 207 LTSWKQLINGLVNSRRIDAAISYFKQMPE--TCEKTWNSIISV-------LIRNGLVKEA 257
SW +I+ V A+S F++M E T+ + ++ ++ G+
Sbjct: 213 TVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHG 272
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ L+ ++++ +I Y + G + A +VFE M RD WN ++ GL +N+L
Sbjct: 273 -AVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYS 331
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
+ L +F M+ SG PD + +++ L G+++HA AI+ + + N ++
Sbjct: 332 DALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLV 391
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
MYA+C ++ F + D+ISW +II G A + + +A+ LF ++++ D +
Sbjct: 392 DMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPM 451
Query: 438 TFVGVLSACS----------------------------------YAGLVDQGRYYFDCMK 463
VL ACS G +D R F+ ++
Sbjct: 452 MIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIR 511
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
+K + S CV + GL EA+ L ++ I+ + L A +++
Sbjct: 512 SKDIVSWTSMITCCVHN-----GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSL 566
Query: 524 KVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
K G EI G + + + L +MY CG E+++++F +K+
Sbjct: 567 KKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQ 613
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 3/203 (1%)
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
++ H+ L K S + T +++ Y + G + A+KVF+ M+ R + WN ++ +
Sbjct: 66 QQLHALLLKSHLSAFLA-TKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSG 124
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
E ++ + M+ G + D TF SVL C L LG +IH A+K +F V N
Sbjct: 125 KYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCN 184
Query: 375 AMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
A+I MY +CG++ A + F + + D +SWNSII G +AL LF RM+
Sbjct: 185 ALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGV 244
Query: 433 KPDDITFVGVLSACSYAGLVDQG 455
+ TFV L V G
Sbjct: 245 ASNTYTFVAALQGVEDPSFVKLG 267
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 112/272 (41%), Gaps = 39/272 (14%)
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
PS + +L +C L G+Q+HA +K + F ++ ++ MY +CG+++ A+
Sbjct: 42 PSRLEHAHSLLLDLCVAAKALPQGQQLHALLLKSHLSAF--LATKLVLMYGKCGSLRDAV 99
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F + I SWN+++ G +A+EL++ MR+ D TF VL AC G
Sbjct: 100 KVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALG 159
Query: 451 LVDQGR----YYFDCMKNKYFLQPRS--AHYTCVVDLLGRFGLID--------------- 489
G C ++ + A Y DL G L D
Sbjct: 160 ESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSI 219
Query: 490 -----------EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
EA++L ++ G+ + + A L + +K+G G L+
Sbjct: 220 ISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLG--MGIHGAVLKS 277
Query: 539 NN-SGVYL--ILTEMYLSCGRREDAKRIFAQM 567
N+ + VY+ L MY CGR EDA R+F M
Sbjct: 278 NHFADVYVANALIAMYAKCGRMEDAGRVFESM 309
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 201/623 (32%), Positives = 324/623 (52%), Gaps = 31/623 (4%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTV 58
N I++A+ +FD++P RDT+ WNVM+RGY K+G DNA+ F +M + TY +
Sbjct: 160 NGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCI 219
Query: 59 IAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
++ N ++ G E D N++++ Y G + A ++F+ MP D
Sbjct: 220 LSICATRGNFCAGTQLHGLVIGSGFEF-DPQVANTLVAMYSKCGNLLYARKLFNTMPQTD 278
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDV-------ASW--TIMVNGLVREGRIVEA 164
V+WN +I V D A F M + V AS+ +I+ +G +R + V +
Sbjct: 279 TVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHS 338
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV-NSRRI 223
+ ++P DV + +I Y G V +A +FQ+ D+ +I+G V + I
Sbjct: 339 YIVRHRVPF-DVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNI 397
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLV------KEAHSYLEKYPYSNIASWTNVIV 277
DA ++ + E ++ SVL V KE H ++ K NI + + I
Sbjct: 398 DAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAIT 457
Query: 278 G-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A + F M+ RD WN MI +N E + F QM SG D+
Sbjct: 458 DMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSV 517
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
+ +S L+ ++LP L G+++H I+ A + T V++ +I MY++CGN+ A F+ +
Sbjct: 518 SLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLM 577
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+ +SWNSII HG + L+L+ M PD +TF+ ++SAC +AGLVD+G
Sbjct: 578 DGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGI 637
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
+YF CM +Y + R HY C+VDL GR G + EA + I++ VWG LLGA
Sbjct: 638 HYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEA---FDTIKSMPFTPDAGVWGTLLGA 694
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
CR+H N+++ ++A ++EL+P NSG Y++L+ ++ G ++ + MKE GV+K P
Sbjct: 695 CRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIP 754
Query: 577 GCSWIQINDGGHVFLSGDSSHPK 599
G SWI +N G H+F + D +HP+
Sbjct: 755 GYSWIDVNGGTHMFSAADGNHPE 777
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 211/460 (45%), Gaps = 28/460 (6%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI 59
R ++A NLF ++ R + WN MIRG + G+ D A+ + +M D +T+ VI
Sbjct: 60 GRFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVI 119
Query: 60 AGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
+NV V D G V D+ +++I Y NG I +A RVF +PL+D
Sbjct: 120 KACGGLNNVPLCMVVHDTARSLGFHV-DLFAGSALIKLYADNGYIRDARRVFDELPLRDT 178
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLFDK 170
+ WN+++ V D A F EM + ++T +++ G +L
Sbjct: 179 ILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGL 238
Query: 171 MPAK----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ D Q N ++A Y G + A LF M D +W LI G V + D A
Sbjct: 239 VIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEA 298
Query: 227 ISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEKY--PYSNIASWTNVIV 277
F M K T+ S + ++ +G + KE HSY+ ++ P+ ++ + +I
Sbjct: 299 APLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPF-DVYLKSALID 357
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
YF+ G+V A K+F+ DV V MI G + L + + F + + G ++ T
Sbjct: 358 VYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLT 417
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
SVL C+ + L G+++H +K V +A+ MYA+CG + A F +
Sbjct: 418 MASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS 477
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
D + WNS+I + +G E A++LF +M ++ K D +
Sbjct: 478 DRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSV 517
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 191/455 (41%), Gaps = 42/455 (9%)
Query: 155 LVREGRIVEARKLFDKMPAKDVQAWNLMIAG-YLDNGCVGVAEDLFQKMHDRDLTSWKQL 213
+V++ R V + + M DV A + + G Y+ G A +LF ++ R W +
Sbjct: 26 MVQQARQVHTQVIVGGM--GDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWNWM 83
Query: 214 INGLVNSRRID-AAISYFKQMPETCEKTWNSIISVLIRNG------LVKEAHSYLEKYPY 266
I GL D A + YFK + + V+ G L H +
Sbjct: 84 IRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGF 143
Query: 267 S-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
++ + + +I Y + G + A +VF+ + RD +WNVM+ G ++ + + F +
Sbjct: 144 HVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCE 203
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ S ++ T+T +L+IC+ G Q+H I V+N ++ MY++CGN
Sbjct: 204 MRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGN 263
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+ A F+++P D ++WN +I G +G+ ++A LF M KPD +TF L +
Sbjct: 264 LLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPS 323
Query: 446 CSYAG----------LVDQGRYYFDC-----------------MKNKYFLQPRSAHYTCV 478
+G + + R FD M K F Q
Sbjct: 324 ILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVC 383
Query: 479 VDLLGRF---GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVM 534
++ + GL +A+N + +G+ + ++L AC +K G E+ +
Sbjct: 384 TAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILK 443
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
+ N V +T+MY CGR + A F +M +
Sbjct: 444 KRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSD 478
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 98/265 (36%), Gaps = 37/265 (13%)
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
S+ CSD + RQ+H Q I S+ ++ +Y CG + A F + +
Sbjct: 16 SLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELR 75
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV------- 452
+ WN +I GL G+ + AL + +M ++ PD TF V+ AC V
Sbjct: 76 YALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 135
Query: 453 DQGR---YYFDCMK----------NKYFLQPRSAH----------YTCVVDLLGRFGLID 489
D R ++ D N Y R + ++ + G D
Sbjct: 136 DTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFD 195
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERV---MELEPNNSGVYL 545
A+ E+R V+ + +L C N G ++ G + E +P V
Sbjct: 196 NAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQ---VAN 252
Query: 546 ILTEMYLSCGRREDAKRIFAQMKEN 570
L MY CG A+++F M +
Sbjct: 253 TLVAMYSKCGNLLYARKLFNTMPQT 277
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 209/652 (32%), Positives = 325/652 (49%), Gaps = 73/652 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER--------- 50
I A +FD +P ++ VTW +I GY + G A+ LF +M P+R
Sbjct: 165 IDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSA 224
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
D N +I + + A+++FD ME R++V+W
Sbjct: 225 CSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSW 284
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVI---GALVNC-QRMDLAESYFK 138
+MI+GY+ N EA+ +F + + DV + ++ G+L Q + K
Sbjct: 285 TTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIK 344
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
D +++ + + EAR +F+ + D ++N MI GY G + A D+
Sbjct: 345 ANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDV 404
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
F KM L L+ +AI KQ+ +GL+ ++
Sbjct: 405 FSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQI-----------------HGLIVKSG 447
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
+ L+ Y S++ I Y + V A VF LM RD+ +WN MIFGL +N+ GEE
Sbjct: 448 TSLDLYAGSSL------IDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEE 501
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
+K F Q++ SG +P+ TF +++T+ S L ++ G+Q HAQ IK + VSNA+I
Sbjct: 502 AVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALID 561
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MYA+CG I+ L F S D+I WNS+I A HG AE+AL +F M T +P+ +T
Sbjct: 562 MYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVT 621
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
FVGVLSAC++AGLVD+G +FD MK KY ++P + HY VV+L GR G + A + +
Sbjct: 622 FVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERM 681
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
IE + VW +LL AC + N+++G A E + +P +SG ++++ +Y S G
Sbjct: 682 P---IEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWS 738
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
DA+++ M GV KEPG SWI++ H F++ HP+ + LL+ L
Sbjct: 739 DAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDEL 790
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 208/462 (45%), Gaps = 46/462 (9%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D+F N ++ + V+ A+ +FD M +++V+W S IS + +G ++A+ +F
Sbjct: 45 DLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQ 104
Query: 111 LK---DVVSWNLVIGALVNCQRMDLAESYFKEMGA--------RDVASWTIMVNGLVREG 159
+ + L+ AL C + A S+ +++ +V T ++N + G
Sbjct: 105 RASGGEAPNEFLLASALRACAQ-SRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVG 163
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
I A +FD +P K+ W +I GY G GVA +LF KM ++G+
Sbjct: 164 CIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMG----------LDGVRP 213
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVI 276
R + A S +S G + ++ H Y + AS N +
Sbjct: 214 DRFVLA-----------------SAVSACSALGFLEGGRQTHGYAYRIAVETDASVINAL 256
Query: 277 VG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ Y + + A K+F+ M R++ W MI G +N E + F Q+ + G PD
Sbjct: 257 IDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDV 316
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
S+L C L + GRQ+HA AIK V N++I MYA+C ++ A F +
Sbjct: 317 FACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEA 376
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+ D IS+N++I G + G A+++F +MR KP +TFV +L S ++
Sbjct: 377 LAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELS 436
Query: 456 RYYFDCM-KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
+ + K+ L + + ++D+ +F L+++A + N
Sbjct: 437 KQIHGLIVKSGTSLDLYAG--SSLIDVYSKFSLVEDAKAVFN 476
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 224/503 (44%), Gaps = 94/503 (18%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------DMFTYNTV 58
R+++A+ LFD+MP ++ V+W I + ++G ++A+ LF + F +
Sbjct: 61 RVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASA 120
Query: 59 IAGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+ QS V ++V G+ VR +V ++I+ Y G ID A+ VF +P+K+
Sbjct: 121 LRACAQSRAVSFGQQV-HGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKN 179
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMG-----------ARDVASWTIM----------- 151
V+W VI + +A F +MG A V++ + +
Sbjct: 180 PVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHG 239
Query: 152 -------------VNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+N L+ + R+ ARKLFD M +++ +W MIAGY+ N C
Sbjct: 240 YAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAE 299
Query: 195 AEDLFQKMHDR----DLTSWKQLIN------GLVNSRRIDAAISYFKQMPETCEKTWNSI 244
A +F ++ D+ + ++N + R++ A K E+ E NS+
Sbjct: 300 AMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHA--HAIKANLESDEYVKNSL 357
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
I + + + EA + E + S+ +I GY +G++ AI VF M
Sbjct: 358 IDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMR-------- 409
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
+ +K PSP TF S+L + S ++L +QIH +K
Sbjct: 410 ------------------YCSLK---PSP--LTFVSLLGVSSSQSAIELSKQIHGLIVKS 446
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+ +++I +Y++ ++ A F+ + D++ WN++I GLA + E+A++LF
Sbjct: 447 GTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLF 506
Query: 425 ERMRLTDFKPDDITFVGVLSACS 447
+++++ P++ TFV +++ S
Sbjct: 507 NQLQVSGLAPNEFTFVALVTVAS 529
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 194/463 (41%), Gaps = 32/463 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ +R+ A+ LFD M R+ V+W MI GY +N AM +F Q+ + D+F +
Sbjct: 262 KCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACAS 321
Query: 58 V------IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+ +A + Q V A + +E + V NS+I Y + EA VF +
Sbjct: 322 ILNSCGSLAAIWQGRQVH-AHAIKANLESDEYVK-NSLIDMYAKCEHLTEARAVFEALAE 379
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEM---GARDVASWTIMVNGLVREGRIVEARKLF 168
D +S+N +I + A F +M + + + G+ +E K
Sbjct: 380 DDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQI 439
Query: 169 DKMPAK-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
+ K D+ A + +I Y V A+ +F MH+RD+ W +I GL + +
Sbjct: 440 HGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQG 499
Query: 224 DAAISYFKQMPETC----EKTWNSIISV---LIRNGLVKEAHSYLEKYPYSNIASWTNVI 276
+ A+ F Q+ + E T+ ++++V L+ ++ H+ + K + +N +
Sbjct: 500 EEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNAL 559
Query: 277 VG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ Y + G + +FE +DV WN MI ++ EE L F M +G P+
Sbjct: 560 IDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNY 619
Query: 336 ATFTSVLTICSDLPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
TF VL+ C+ +D G R K A T +++ ++ R G + +A
Sbjct: 620 VTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIE 679
Query: 395 SVPIHDIIS-WNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+PI + W S++ G E E L D P D
Sbjct: 680 RMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLAD--PAD 720
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
HA+A+ ++N ++ Y++ G ++ A F +P +++SW S I A HG
Sbjct: 34 HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93
Query: 418 EKALELFERMRLTDF--KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
E A+ LF + P++ L AC+ + V G+ + + L
Sbjct: 94 EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHG-VAVRIGLDGNVYVG 152
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
T +++L + G ID AM + + + +P W A++
Sbjct: 153 TALINLYAKVGCIDAAMLVFDALPVK----NPVTWTAVI 187
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 206/638 (32%), Positives = 317/638 (49%), Gaps = 36/638 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERD-MFTYNTVIAGLMQ 64
+ EAQ +F+ + ++D W MI Y + G D A+ +F QM E D M T T +A L
Sbjct: 55 VPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNA 114
Query: 65 SDNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
+ + K DGME+ DV ++I+ Y G + A F + +DV
Sbjct: 115 CASTESLK---DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDV 171
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGL---------VREGRIVEAR 165
VSW +I A V + LA ++ M V I + + + EG+ V
Sbjct: 172 VSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGL 231
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
M + DV+ N + + + G +G A LF+ M DRD+ +W +I V +
Sbjct: 232 VSSGVMES-DVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGE 290
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLV--------KEAHSYLEKYPYSNIASWTNVIV 277
A+ F ++ + K N I VL+ N K H +++ Y A ++
Sbjct: 291 AVRLFGRLQQDGVKA-NDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALM 349
Query: 278 GYFEMGEV-GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
+ E G A K+F M ++DV W VM +N +E L+ F +M+ G P +A
Sbjct: 350 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 409
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T +VL C+ L L GRQIH+ I+ V A+I MY +CG + A+ F +
Sbjct: 410 TLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKM 469
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
DI+ WNS++ A HGY ++ L+LF +M+L K D ++FV VLSA S++G V G
Sbjct: 470 AKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGY 529
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
YF M + + P Y CVVDLLGR G I EA++++ ++ G +W LLGA
Sbjct: 530 QYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIV--LKLSGCLPDGILWMTLLGA 587
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
CR HN + A E+V+E +P++SG Y++L+ +Y + G + R+ M+ GVKKEP
Sbjct: 588 CRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEP 647
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
G S I+I + H FL GD SHP+ H + L++L++E+
Sbjct: 648 GRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEM 685
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 23/236 (9%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD A F ++L CS +D GR++H Q V +I MYA+CG++ A
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA--- 449
F + D+ +W +I G ++AL +F +M+ D P +T+V +L+AC+
Sbjct: 62 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121
Query: 450 --GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
G+ G+ + F+ T ++++ + G + A + + +
Sbjct: 122 KDGMEIHGQILQQGFEGDVFVG------TALINMYNKCGSVRGAWDSFKRLEHRDV---- 171
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELE---PNNSGVYLILTEM----YLSCGR 556
W A++ AC H+ + R M+L+ PN +Y + YLS G+
Sbjct: 172 VSWTAMIAACVQHDQFALARWLYRR-MQLDGVVPNKITLYTVFNAYGDPNYLSEGK 226
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVI 59
++ EA ++F+KM +RD + WN M+ Y ++G+ D + LFNQM + D ++ +V+
Sbjct: 457 GKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVL 516
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN-----GLIDEALRVFHGMP--LK 112
+ L S +V + F M +T + G V + G I EA+ + + L
Sbjct: 517 SALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLP 576
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
D + W ++GA + D A++ +++ RD
Sbjct: 577 DGILWMTLLGACRTHNKTDQAKAAAEQVLERD 608
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 277/534 (51%), Gaps = 38/534 (7%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA 146
N+++ Y N L AL VF MPL+ RD
Sbjct: 176 NTLLRAYALNSLPHAALAVFVDMPLRQ-----------------------------RDTF 206
Query: 147 SWTIMVNGLVREGRIVEAR----KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
+++ ++ L G + R +F +D N +I Y N + A+ +F +M
Sbjct: 207 TYSFLIKALATAG-VTPVRAAHTHVFKLGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEM 265
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLE 262
RD+ SW + +V +DAA S F +MPE +WN+++ + G +EA +
Sbjct: 266 TTRDVVSWNTAMAAMVRKGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQ 325
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ P N+ SW+ V+ Y + G++ A +F+ M +++ W +M+ + L E +
Sbjct: 326 RMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRL 385
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F +MKE+ D S+L C++ L LG++IH + + T V NA++ M+ +
Sbjct: 386 FTEMKEAAIELDVVAVVSILAACAESGCLALGKRIHRHVRQRKLGRSTLVCNALMDMFCK 445
Query: 383 CGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
CG + A F + + D +SWN II G A HG+ EKAL LF +M+ F PD +T +
Sbjct: 446 CGCVNRADYIFDTEIVEKDSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLIN 505
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
VLSAC++ GLV++GR +F M+ Y ++P HY C+VDLLGR GLI EA++++ + +
Sbjct: 506 VLSACTHMGLVEEGRRFFANMETDYGIKPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWE 565
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
EV +WG+LL ACR+H N++ E+A + L+P+N+G Y +L+ +Y G+ D
Sbjct: 566 PNEV---IWGSLLSACRLHKNVEYAELAANELSNLQPSNAGNYAVLSNIYAEAGKWSDMA 622
Query: 562 RIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+ QMK G +K G SWI++++ H F GD HP+ ++ +++ L + ++
Sbjct: 623 KARVQMKGTGSQKTAGSSWIELDEAFHEFTVGDRKHPESDQISDMIDRLSSHVK 676
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 208/441 (47%), Gaps = 28/441 (6%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMP--ERDMFTYNTVIAGLMQS--DNVQGAK-EVFDGME 79
N ++R Y N A+ +F MP +RD FTY+ +I L + V+ A VF
Sbjct: 176 NTLLRAYALNSLPHAALAVFVDMPLRQRDTFTYSFLIKALATAGVTPVRAAHTHVFKLGS 235
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKE 139
V D N++I Y N + +A +VF M +DVVSWN + A+V +D A S F E
Sbjct: 236 VEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAMVRKGEVDAARSMFDE 295
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
M +D SW M++G + G EA +LF +MP ++V +W+ +++ Y G + +A +F
Sbjct: 296 MPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIF 355
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-EKTWNSIISVLIRN------G 252
KM ++L +W +++ + A F +M E E +++S+L
Sbjct: 356 DKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAVVSILAACAESGCLA 415
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYF-EMGEVGSAIKVFEL-MTTRDVTVWNVMIFGL 310
L K H ++ + N ++ F + G V A +F+ + +D WN++I G
Sbjct: 416 LGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDSVSWNIIIGGF 475
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ-----AIKIA 365
+ GE+ L F QMK+ G PD T +VL+ C+ + ++ GR+ A IK
Sbjct: 476 AMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPE 535
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVP--IHDIISWNSIICGLAYHGYAEKALEL 423
+ M+ + R G I+ A+ S+P +++I W S++ H E A EL
Sbjct: 536 IEHY----GCMVDLLGRGGLIKEAVDMIKSMPWEPNEVI-WGSLLSACRLHKNVEYA-EL 589
Query: 424 FERMRLTDFKPDDITFVGVLS 444
L++ +P + VLS
Sbjct: 590 AAN-ELSNLQPSNAGNYAVLS 609
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 149/286 (52%), Gaps = 22/286 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + A+++FD+MP++DTV+WN M+ GY K G + A LF +MP R++ +++TV++
Sbjct: 281 VRKGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRNVVSWSTVVS 340
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVS 116
+ +++ A+ +FD M +++VTW M+S GL+ EA R+F M DVV+
Sbjct: 341 AYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVA 400
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFD-KM 171
++ A + L + + + R + T++ N L+ + G + A +FD ++
Sbjct: 401 VVSILAACAESGCLALGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEI 460
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAI 227
KD +WN++I G+ +G A +LF +M + D + +++ + ++
Sbjct: 461 VEKDSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSACTHMGLVEEGR 520
Query: 228 SYFKQM-------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
+F M PE + + ++ +L R GL+KEA ++ P+
Sbjct: 521 RFFANMETDYGIKPEI--EHYGCMVDLLGRGGLIKEAVDMIKSMPW 564
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 135/280 (48%), Gaps = 27/280 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N + +A+ +FD+M RD V+WN + + G +D A +F++MPE+D ++NT++ G
Sbjct: 251 KNDGLSDAKKVFDEMTTRDVVSWNTAMAAMVRKGEVDAARSMFDEMPEKDTVSWNTMLDG 310
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
++ + A E+F M R+VV+W++++S Y G ++ A +F MP K++V+W +++
Sbjct: 311 YAKAGEAEEAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMV 370
Query: 122 GALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREG---------RIVEARKLF 168
A + A F EM DV + ++ G R V RKL
Sbjct: 371 SACAQKGLVGEAGRLFTEMKEAAIELDVVAVVSILAACAESGCLALGKRIHRHVRQRKL- 429
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ-KMHDRDLTSWKQLINGLVNSRRIDAAI 227
+ N ++ + GCV A+ +F ++ ++D SW +I G + A+
Sbjct: 430 ----GRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDSVSWNIIIGGFAMHGHGEKAL 485
Query: 228 SYFKQM------PETCEKTWNSIISVLIRNGLVKEAHSYL 261
+ F QM P+ T +++S GLV+E +
Sbjct: 486 NLFTQMKQQGFHPDAV--TLINVLSACTHMGLVEEGRRFF 523
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 189/636 (29%), Positives = 338/636 (53%), Gaps = 29/636 (4%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAG 61
+ + + +F+ M +R+ VTW ++ GY + G L + M LF +M + FT+++V++
Sbjct: 107 VLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSM 166
Query: 62 LMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+ V + V ++ V NS+++ Y GL++EA VF M +D+VS
Sbjct: 167 VASQGMVDLGQHVH-AQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVS 225
Query: 117 WNLVIGALV----NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
WN ++ LV + + + L + ++++ ++N + AR+L +
Sbjct: 226 WNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVL 285
Query: 173 AKDVQAW-NLMIA---GYLDNGCVGVAEDLFQKMH-DRDLTSWKQLINGLVNSRRIDAAI 227
++ N+M A Y G + A D+F M +++ SW +I+G + + I A
Sbjct: 286 KHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAA 345
Query: 228 SYFKQMPE----TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS-WTNVIVGYFEM 282
+ F +M E + T+++I++V + H+ + K Y + T ++V Y ++
Sbjct: 346 ALFSRMREDGVAPNDLTYSTILTV-SEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKL 404
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
A+ +F+++ +DV W+ M+ + F++M G P+ T +S +
Sbjct: 405 CSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAI 464
Query: 343 TIC-SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
C S +DLGRQ HA +IK + VS+A+++MYAR G+I++A F D+
Sbjct: 465 DACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDL 524
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
+SWNS++ G A HGY++KAL++F +M + D +TF+ V+ C++AGLV++G+ YFD
Sbjct: 525 LSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDL 584
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
M Y + P HY C+VDL R G +DE M+L I PT+W ALLGACR+H
Sbjct: 585 MVRDYGITPTMDHYACMVDLYSRAGKLDETMSL---IEGMPFPAGPTIWRALLGACRVHK 641
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
N+++G++A E+++ LEP +S Y++L+ +Y + G+ ++ + M V+KE GCSWI
Sbjct: 642 NVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWI 701
Query: 582 QINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
QI + H F++ D SHP ++ L + ++++E
Sbjct: 702 QIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQE 737
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 223/465 (47%), Gaps = 42/465 (9%)
Query: 39 NAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGL 98
+A+C+ D+ +++ M +V ++VF+GM R+VVTW S+++GY+ G+
Sbjct: 78 HALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGV 137
Query: 99 IDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNG 154
+ + + +F M + V +++ V+ + + +DL + + S + N
Sbjct: 138 LLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNS 197
Query: 155 LV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
L+ + G + EAR +F +M +D+ +WN ++AG + NG RDL +
Sbjct: 198 LMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNG--------------RDLEAL 243
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
QL + +SR S + E+ T ++ + L GL ++ HS + K+ + +
Sbjct: 244 -QLFH---DSR------SSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYG 293
Query: 271 S-WTNVIVGYFEMGEVGSAIKVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ T ++ Y + G++ A+ VF LM+ +++V W MI G +N F +M+E
Sbjct: 294 NVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMRE 353
Query: 329 SGPSPDNATFTSVLTIC-SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
G +P++ T++++LT+ + P QIHAQ IK TV A++ Y++ + +
Sbjct: 354 DGVAPNDLTYSTILTVSEASFPP-----QIHAQVIKTNYECTPTVGTALMVSYSKLCSTE 408
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC- 446
AL F + D++SW++++ A G A F +M + KP++ T + AC
Sbjct: 409 EALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACA 468
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
S A VD GR F + K+ + +V + R G I+ A
Sbjct: 469 SPAAGVDLGR-QFHAISIKHRCHDALCVSSALVSMYARKGSIENA 512
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 150/303 (49%), Gaps = 14/303 (4%)
Query: 253 LVKEAHSYLEK--YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
L K+ H+ + + + +I T+++ Y V KVFE M R+V W ++ G
Sbjct: 73 LGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGY 132
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+ + + + F +M+ G P+ TF+SVL++ + +DLG+ +HAQ+IK
Sbjct: 133 IQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTV 192
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
V N+++ MYA+CG ++ A + F + D++SWN+++ GL +G +AL+LF R +
Sbjct: 193 FVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSS 252
Query: 431 DFKPDDITFVGVLSACS---YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
+ T+ V++ C+ + GL Q + +K+ + T ++D + G
Sbjct: 253 ITMLTESTYSTVINLCANLKHLGLARQ--LHSSVLKHGF--HSYGNVMTALMDAYNKAGQ 308
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYL 545
+D+A+++ + VS W A++ C + +I + R+ E + PN+
Sbjct: 309 LDKALDVFLLMSGSQNVVS---WTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYST 365
Query: 546 ILT 548
ILT
Sbjct: 366 ILT 368
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
R I+ AQ +F++ RD ++WN M+ GY ++G+ A+ +F QM + D T+ +
Sbjct: 505 RKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLS 564
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRD------VVTWNSMISGYVCNGLIDEALRVFHGMPL 111
VI G + V+ ++ FD M VRD + + M+ Y G +DE + + GMP
Sbjct: 565 VIMGCAHAGLVEEGQQYFDLM-VRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPF 623
Query: 112 KDVVS-WNLVIGAL---VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIV---EA 164
+ W ++GA N + LA + D A++ ++ N G+ E
Sbjct: 624 PAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEV 683
Query: 165 RKLFD 169
RKL D
Sbjct: 684 RKLMD 688
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 14/177 (7%)
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF-TTVSNAMITMY 380
F + G ++ IC +P LG+Q+HA ++ + V +++ MY
Sbjct: 42 FLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMY 101
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
++ F + ++++W S++ G G + LF RMR P+ TF
Sbjct: 102 MNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFS 161
Query: 441 GVLSACSYAGLVDQGRYY------FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
VLS + G+VD G++ F C + ++++ + GL++EA
Sbjct: 162 SVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNS-------LMNMYAKCGLVEEA 211
>gi|326522488|dbj|BAK07706.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 799
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 202/650 (31%), Positives = 323/650 (49%), Gaps = 52/650 (8%)
Query: 23 TWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
T++ M+ + K G + +A LF+ MPER + +Y T++ LM+ V A E+++
Sbjct: 154 TYDFMVHEHVKAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQCPSGS 213
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFK 138
V + + ISG+V N L AL VF M V +++ +I A V LA S
Sbjct: 214 VAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVG 273
Query: 139 EMGARDVASWTIMV-NGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ +I V N L+ R G ARK+FD+M KDV +W ++ Y ++G +
Sbjct: 274 SAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLD 333
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETCEKTWNSIISVL---- 248
A + M +R+ SW LI A+ + QM + C + SVL
Sbjct: 334 GARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACA 393
Query: 249 ----IRNGL------------------------------VKEAHSYLEKYPYSNIASWTN 274
+R G ++A + + P NI W +
Sbjct: 394 TLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNS 453
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+ GY G++ A+ +F+ M R++ WN +I G +N + L+ F M SG P
Sbjct: 454 LASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPG 513
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
TF+SVL C++L +L G+ HA+ IK+ + + A+ MYA+ G++QS+ F
Sbjct: 514 EITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFY 573
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+P + ++W ++I GLA +G AE+++ LFE M T P++ TF+ +L ACS+ GLV+Q
Sbjct: 574 QMPERNDVTWTAMIQGLAENGLAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQ 633
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
+YF+ M+ + + P+ HYTC+VD+L R G + EA LL + + W ALL
Sbjct: 634 AIHYFEKMQ-AWGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKS---EANSWAALL 689
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
AC + N ++GE A +R+ EL +N+ Y++L+ MY SCGR +DA RI MK +KK
Sbjct: 690 SACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKK 749
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILFDAYY 624
+ GCSW+Q+ H F S ++ HP + +L+LL E + + Y
Sbjct: 750 DGGCSWVQVRGQYHAFFSWEAKHPLSMEINEILDLLLWESSLDFVLSVDY 799
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 201/470 (42%), Gaps = 81/470 (17%)
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
GA ++ MV+ V+ G I AR LFD MP + V ++ M+ + G V A +L++
Sbjct: 148 GAASPFTYDFMVHEHVKAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYE 207
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------P-------------------- 234
+ + + I+G V + A+ F++M P
Sbjct: 208 QCPSGSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGL 267
Query: 235 --------------ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
E+ + NS+I++ +R G A ++ ++ SWT ++ Y
Sbjct: 268 AMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYS 327
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
E G++ A +V + M R+ W +I + E +K + QM G P+ + F+S
Sbjct: 328 ESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSS 387
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
VL+ C+ L L G +IHA+++K+ + VS+++I MY +C + A F ++P +
Sbjct: 388 VLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKN 447
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
I+ WNS+ G +Y+G +A+ LF++M + + G YA Q R + D
Sbjct: 448 IVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISG------YA----QNRQFVD 497
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
+++ N + A G + ++L AC
Sbjct: 498 ALRS------------------------------FNAMLASGQVPGEITFSSVLLACANL 527
Query: 521 NNIKVGEIAGERVMELEPNNS-GVYLILTEMYLSCGRREDAKRIFAQMKE 569
++ G++A + ++L S + L++MY G + +KR+F QM E
Sbjct: 528 CSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPE 577
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 140/289 (48%), Gaps = 48/289 (16%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
+ ++AQ +FD +P+++ V WN + GY NG + AM LF +MP R++ ++NT+I+G Q
Sbjct: 432 KCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQ 491
Query: 65 SDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
+ A F+ M +V +T++S++ C L +LV
Sbjct: 492 NRQFVDALRSFNAMLASGQVPGEITFSSVL--LACANLC------------------SLV 531
Query: 121 IGALVNCQ--RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
G + + + ++ + ES F +G T + + + G + ++++F +MP ++
Sbjct: 532 TGKMAHAKTIKLGMEESIF--IG-------TALSDMYAKSGDLQSSKRMFYQMPERNDVT 582
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQM- 233
W MI G +NG + LF+ M +T ++ L+ + ++ AI YF++M
Sbjct: 583 WTAMIQGLAENGLAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQ 642
Query: 234 -----PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA-SWTNVI 276
P+ EK + ++ VL R G + EA + L K P + A SW ++
Sbjct: 643 AWGISPK--EKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANSWAALL 689
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 52/276 (18%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN-GFLD-----NAMCLFNQMPERDMFT-- 54
N ++ EA LF KMP R+ +WN +I GY +N F+D NAM Q+P F+
Sbjct: 461 NGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSV 520
Query: 55 ------YNTVIAGLM-------------------------QSDNVQGAKEVFDGMEVRDV 83
+++ G M +S ++Q +K +F M R+
Sbjct: 521 LLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERND 580
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-SWNLVIGALVNCQRMDLAES---YFKE 139
VTW +MI G NGL +E++ +F M + + + + L C L E YF++
Sbjct: 581 VTWTAMIQGLAENGLAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEK 640
Query: 140 MGARDVAS----WTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGV 194
M A ++ +T MV+ L R GR++EA L K P+K + +W +++ +
Sbjct: 641 MQAWGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANSWAALLSACNTYKNEEI 700
Query: 195 AEDLFQKMHD--RDLTSWKQLINGLVNS--RRIDAA 226
E +++H+ +D T+ L++ + S R DAA
Sbjct: 701 GERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAA 736
>gi|326507326|dbj|BAJ95740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 798
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 201/650 (30%), Positives = 324/650 (49%), Gaps = 52/650 (8%)
Query: 23 TWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
T++ M+ + K G + +A LF+ MPER++ +Y T++ LM+ V A E+++
Sbjct: 153 TYDFMVHEHVKAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQCPSGS 212
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFK 138
V + + ISG+V N L AL VF M V +++ +I A V LA S
Sbjct: 213 VAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIVG 272
Query: 139 EMGARDVASWTIMV-NGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ +I V N L+ R G ARK+FD+M KDV +W ++ Y ++G +
Sbjct: 273 SAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLD 332
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETCEKTWNSIISVL---- 248
A + M +R+ SW LI A+ + QM + C + SVL
Sbjct: 333 GARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACA 392
Query: 249 ----IRNGL------------------------------VKEAHSYLEKYPYSNIASWTN 274
+R G ++A + + P NI W +
Sbjct: 393 TLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNS 452
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+ GY G++ A+ +F+ M R++ WN +I G +N + L+ F M SG P
Sbjct: 453 LASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPG 512
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
TF+SVL C++L +L G+ HA+ IK+ + + A+ MYA+ G++QS+ F
Sbjct: 513 EITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFY 572
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+P + ++W ++I GLA +G+AE+++ L E M T P++ TF+ +L ACS+ GLV+Q
Sbjct: 573 QMPERNDVTWTAMIQGLAENGFAEESILLLEDMMATGMTPNEHTFLALLFACSHGGLVEQ 632
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
+YF+ M+ + + P+ HYTC+VD+L R G + EA LL + + W ALL
Sbjct: 633 AIHYFEKMQ-AWGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKS---EANSWAALL 688
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
AC + N ++GE A +R+ EL +N+ Y++L+ MY SCGR +DA RI MK +KK
Sbjct: 689 SACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKK 748
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILFDAYY 624
+ GCSW+Q+ H F S ++ HP + +L+LL E + + Y
Sbjct: 749 DGGCSWVQVRGQYHAFFSWEAKHPLSMEINEILDLLLWESSLDFVLSVDY 798
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 202/470 (42%), Gaps = 81/470 (17%)
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
GA ++ MV+ V+ G I AR LFD MP ++V ++ M+ + G V A +L++
Sbjct: 147 GAASPFTYDFMVHEHVKAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYE 206
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------P-------------------- 234
+ + + I+G V + A+ F++M P
Sbjct: 207 QCPSGSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGL 266
Query: 235 --------------ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
E+ + NS+I++ +R G A ++ ++ SWT ++ Y
Sbjct: 267 AMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYS 326
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
E G++ A +V + M R+ W +I + E +K + QM G P+ + F+S
Sbjct: 327 ESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSS 386
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
VL+ C+ L L G +IHA+++K+ + VS+++I MY +C + A F ++P +
Sbjct: 387 VLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKN 446
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
I+ WNS+ G +Y+G +A+ LF++M + + G YA Q R + D
Sbjct: 447 IVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISG------YA----QNRQFVD 496
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
+++ N + A G + ++L AC
Sbjct: 497 ALRS------------------------------FNAMLASGQVPGEITFSSVLLACANL 526
Query: 521 NNIKVGEIAGERVMELEPNNS-GVYLILTEMYLSCGRREDAKRIFAQMKE 569
++ G++A + ++L S + L++MY G + +KR+F QM E
Sbjct: 527 CSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPE 576
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 139/289 (48%), Gaps = 48/289 (16%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
+ ++AQ +FD +P+++ V WN + GY NG + AM LF +MP R++ ++NT+I+G Q
Sbjct: 431 KCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQ 490
Query: 65 SDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
+ A F+ M +V +T++S++ C L +LV
Sbjct: 491 NRQFVDALRSFNAMLASGQVPGEITFSSVL--LACANLC------------------SLV 530
Query: 121 IGALVNCQ--RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
G + + + ++ + ES F +G T + + + G + ++++F +MP ++
Sbjct: 531 TGKMAHAKTIKLGMEESIF--IG-------TALSDMYAKSGDLQSSKRMFYQMPERNDVT 581
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQM- 233
W MI G +NG + L + M +T ++ L+ + ++ AI YF++M
Sbjct: 582 WTAMIQGLAENGFAEESILLLEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQ 641
Query: 234 -----PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA-SWTNVI 276
P+ EK + ++ VL R G + EA + L K P + A SW ++
Sbjct: 642 AWGISPK--EKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANSWAALL 688
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 52/276 (18%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN-GFLD-----NAMCLFNQMPERDMFT-- 54
N ++ EA LF KMP R+ +WN +I GY +N F+D NAM Q+P F+
Sbjct: 460 NGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSV 519
Query: 55 ------YNTVIAGLM-------------------------QSDNVQGAKEVFDGMEVRDV 83
+++ G M +S ++Q +K +F M R+
Sbjct: 520 LLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERND 579
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-SWNLVIGALVNCQRMDLAES---YFKE 139
VTW +MI G NG +E++ + M + + + + L C L E YF++
Sbjct: 580 VTWTAMIQGLAENGFAEESILLLEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEK 639
Query: 140 MGARDVAS----WTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGV 194
M A ++ +T MV+ L R GR++EA L K P+K + +W +++ +
Sbjct: 640 MQAWGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANSWAALLSACNTYKNEEI 699
Query: 195 AEDLFQKMHD--RDLTSWKQLINGLVNS--RRIDAA 226
E +++H+ +D T+ L++ + S R DAA
Sbjct: 700 GERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAA 735
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 190/653 (29%), Positives = 329/653 (50%), Gaps = 58/653 (8%)
Query: 18 QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDN-VQGAKEVFD 76
+ D VT + ++ Y K LD A +F +MPER++ ++ VIAG +Q+D ++G K D
Sbjct: 170 ENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKD 229
Query: 77 GMEVRDVVTWNSMISGY-VCNGLIDEALRV-FHGMPLKDVVSWNLVIGA-----LVNCQR 129
++V V+ ++ S + C GL L HG LK +++ +IG C R
Sbjct: 230 MLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDR 289
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF----------DKMPAKDVQAW 179
M A F + S+ ++ G R+ + ++A ++F D++
Sbjct: 290 MSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTA 349
Query: 180 NLMIAGYLD---------------NGCVG--------------VAEDLFQKMHDRDLTSW 210
+I G+L+ N CV A +F M RD SW
Sbjct: 350 CSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSW 409
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
+I + I +S F M + + + +++ ++A +Y + +
Sbjct: 410 NAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVK 469
Query: 271 S-----W---TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
S W + ++ Y + G + A K+ + + + WN +I G E ++
Sbjct: 470 SGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRY 529
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F QM E G PDN T+ +VL +C+++ T++LG+QIHAQ +K+ + +++ ++ MY++
Sbjct: 530 FSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSK 589
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CGN+Q + L F P D ++W+++IC AYHG+ E+A++LFE M+L + KP+ F+ V
Sbjct: 590 CGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISV 649
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
L AC++ G VD+G +YF M++ Y L P HY+C+VDLLGR ++EA+ L+ +
Sbjct: 650 LRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMH--- 706
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
E +W LL C++ N++V E A +++L+P +S Y++L +Y + G + +
Sbjct: 707 FEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAK 766
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
I + MK +KKEPGCSWI++ D H FL GD +HP+ + +LL E++
Sbjct: 767 IRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMK 819
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 227/513 (44%), Gaps = 61/513 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+++ + A +FD+MP RD ++WN MI GY + G + A LF+ MPERD+ ++N++++
Sbjct: 53 KSSNMNYAFKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSC 112
Query: 62 LMQSDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNGLIDEALRV-FHGMPLK---- 112
+ + + + E+F M D T++ ++ C+G+ D L + H + ++
Sbjct: 113 YLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKA--CSGIEDYGLGLQVHCLAIQMGFE 170
Query: 113 -DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
DVV+ + ++ C+++D A F+EM R++ W+ ++ G V+ R +E KLF M
Sbjct: 171 NDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDM 230
Query: 172 PAKDVQAWNLMIAGYLDNGCVGV-AEDLFQKMHDRDLTS--------WKQLINGLVNSRR 222
+ A C G+ A L ++H L S ++ R
Sbjct: 231 LKVGMGVSQSTYASVF-RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDR 289
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIR--NGL--------VKEAHSYLEKYPYSNIASW 272
+ A F +P +++N+II R GL ++ + ++ S +
Sbjct: 290 MSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTA 349
Query: 273 TNVIVGYFE--------------------------MGEVGS---AIKVFELMTTRDVTVW 303
+VI G+ E G+ G+ A +F+ M RD W
Sbjct: 350 CSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSW 409
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
N +I +N+ + L FV M S PD+ T+ SV+ C+ L+ G +IH + +K
Sbjct: 410 NAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVK 469
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
V +A++ MY +CG + A + +SWNSII G + +E A
Sbjct: 470 SGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRY 529
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
F +M PD+ T+ VL C+ ++ G+
Sbjct: 530 FSQMLEMGVIPDNFTYATVLDVCANMATIELGK 562
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 179/373 (47%), Gaps = 37/373 (9%)
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
A K+FD+MP +DV +WN MI GY + G +G A+ LF M +RD+ SW L++ +++
Sbjct: 60 AFKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVN 119
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRN-------GLVKEAHSYLEKYPYSN-IASWTNV 275
+I F +M + SV+++ GL + H + + N + + + +
Sbjct: 120 RKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSAL 179
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ Y + ++ A ++F M R++ W+ +I G +ND EGLK F M + G
Sbjct: 180 VDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQ 239
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
+T+ SV C+ L LG Q+H A+K + + A + MYA+C + A F++
Sbjct: 240 STYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNT 299
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS-------- 447
+P S+N+II G A KALE+F+ ++ T D+I+ G L+ACS
Sbjct: 300 LPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEG 359
Query: 448 ---YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI-RADGI 503
+ V G + C+ N ++D+ G+ G + EA + +++ R D +
Sbjct: 360 IQLHGLAVKCGLGFNICVANT------------ILDMYGKCGALVEACTIFDDMERRDAV 407
Query: 504 EVSPTVWGALLGA 516
W A++ A
Sbjct: 408 S-----WNAIIAA 415
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 135/570 (23%), Positives = 244/570 (42%), Gaps = 63/570 (11%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
++ N ++ +S N+ A +VFD M RDV++WN+MI GY G + A +F MP
Sbjct: 41 IYVANCLVQFYCKSSNMNYAFKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPE 100
Query: 112 KDVVSWNLVIGAL----VNCQRMDLAESYFKEMGARDVASWTIMV---NGLVREGRIVEA 164
+DVVSWN ++ VN + +++ D A++++++ +G+ G ++
Sbjct: 101 RDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQV 160
Query: 165 RKLFDKMP-AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
L +M DV + ++ Y + A +F++M +R+L W +I G V + R
Sbjct: 161 HCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRF 220
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRN---------GLVKEAHSYLEKYPYSNIASWTN 274
+ FK M + S + + R+ G H+ + Y +I T
Sbjct: 221 IEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIG-TA 279
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+ Y + + A KVF + +N +I G D G + L+ F ++ + S D
Sbjct: 280 TLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFD 339
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ + LT CS + G Q+H A+K V+N ++ MY +CG + A F
Sbjct: 340 EISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFD 399
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA----- 449
+ D +SWN+II + K L LF M + +PDD T+ V+ AC+
Sbjct: 400 DMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNY 459
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD-------- 501
G+ GR M +F+ + +VD+ G+ G++ EA + + +
Sbjct: 460 GMEIHGRIVKSGMGLDWFVG------SALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSI 513
Query: 502 -----------------------GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
G+ + +L C I++G+ ++++L
Sbjct: 514 ISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNL 573
Query: 539 NNSGVYL--ILTEMYLSCGRREDAKRIFAQ 566
+S VY+ L +MY CG +D++ +F +
Sbjct: 574 -HSDVYIASTLVDMYSKCGNMQDSRLMFEK 602
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 115/292 (39%), Gaps = 66/292 (22%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
TF+ +L CS+L L+ G+Q HAQ I + V+N ++ Y + N+ A F +
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 397 PIHDIISWNSIICGLA-------------------------------YHGYAEKALELFE 425
P D+ISWN++I G A ++G K++E+F
Sbjct: 68 PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQGR-YYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
RMR D TF VL ACS G+ D G C+ + + + +VD+ +
Sbjct: 128 RMRSLKIPHDYATFSVVLKACS--GIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 485 FGLID-------------------------------EAMNLLNEIRADGIEVSPTVWGAL 513
+D E + L ++ G+ VS + + ++
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 514 LGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+C + K+G ++ G + +S + +MY C R DA ++F
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVF 297
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 204/693 (29%), Positives = 333/693 (48%), Gaps = 105/693 (15%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMI----------------RGYFKNGFLDNAMCLFN 45
R + A++L +MP R+ V+WN +I RG + G L +
Sbjct: 88 RAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLAS 147
Query: 46 QMP-----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
+ + + F N ++ + +V A +FD M +
Sbjct: 148 VLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPN 207
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMD------- 131
V++ +M+ G +G +D+ALR+F M D V+ + V+GA D
Sbjct: 208 EVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAI 267
Query: 132 -LAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
LA+S + + S + N L+ + ++ EA K+F+ M + + +WN+++ GY
Sbjct: 268 RLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGY 327
Query: 187 LDNGC-----------------------------------VGVAEDLFQKMHDRDLTSWK 211
GC V A +F K+ +T+W
Sbjct: 328 GQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWN 387
Query: 212 QLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIRNGLV---KEAHSYLEKY 264
L++G I F++M + T I+S R G++ K+ HS K
Sbjct: 388 TLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKL 447
Query: 265 PYSN-IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
N + + +I Y + G+VG A +F +MT RDV WN MI GL + L EE FF
Sbjct: 448 LLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFF 507
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
QM+E+G P +++ S++ C+ L ++ GRQIHAQ +K +Q V +++I MYA+C
Sbjct: 508 KQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKC 567
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
GN+ A L F+ + + +I++WN +I G A +G+ EKA+ELFE M T KPD +TF+ VL
Sbjct: 568 GNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVL 627
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI--RAD 501
+ CS++GLVD+ YF+ M++ Y ++P HYTC++D LGR G E + +++++ + D
Sbjct: 628 TGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDD 687
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
I +W LL AC +H+N ++GE A + + L+P N Y++L+ +Y + GR DA
Sbjct: 688 AI-----LWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPSPYVLLSNIYATLGRHGDAS 742
Query: 562 RIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
+ A M GV K G SW+ DG F+ D
Sbjct: 743 AVRALMSSRGVVKGRGYSWVNHKDGARAFMVAD 775
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N ++ + +GL A P N+ S+ I G++ +A + M R+
Sbjct: 49 NRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAV 108
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN +I + +D E L+ + M + G +P N T SVL+ C + LD GR+ H A
Sbjct: 109 SWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLA 168
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
+K+ + V N ++ MY +CG++ A+ F + + +S+ +++ GLA G + AL
Sbjct: 169 VKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDAL 228
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYA 449
LF RM + + D + VL AC+ A
Sbjct: 229 RLFARMSRSAIRVDPVAVSSVLGACAQA 256
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 192/654 (29%), Positives = 320/654 (48%), Gaps = 64/654 (9%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF---- 75
D VT ++ Y LD+A +F +MPER+ ++ VIAG +++D +++
Sbjct: 204 DVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVML 263
Query: 76 -DGMEVRDVVTWNSMISGYVCNGLIDEALRV-FHGMPLKDVVSWNLVIGA-----LVNCQ 128
+GM V ++ S C GL L H LK ++ ++G C
Sbjct: 264 DEGMGVSQATFASAFRS---CAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCD 320
Query: 129 RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF----------DKMPAKDVQA 178
RM A F S ++ G R+ +++EA ++F D++
Sbjct: 321 RMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALT 380
Query: 179 WNLMIAGYLD---------------NGCVG--------------VAEDLFQKMHDRDLTS 209
I GYL+ N CV A +F M +D S
Sbjct: 381 ACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVS 440
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
W +I + ++ ++ F M + + + +++ K+A +Y + I
Sbjct: 441 WNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVI 500
Query: 270 AS-----W---TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
S W + +I Y + G + A K+ E + R WN +I G GE L
Sbjct: 501 KSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALS 560
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
+F +M + G PDN T+ +VL IC++L T++LG+QIH Q +K+ + +++ ++ MY+
Sbjct: 561 YFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYS 620
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CGN+Q + + F P D ++W+++IC AYHG E A++LFE M+L + KP+ F+
Sbjct: 621 KCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFIS 680
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
VL AC++ G VD+G +YF M++ Y L P+ HY+C+VDLLGR G ++EA+ L+ +
Sbjct: 681 VLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMP-- 738
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
E +W LLG CR+ N++V E A +++L+P +S Y++L+ +Y G +
Sbjct: 739 -FEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVA 797
Query: 562 RIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+I + MK +KKEPGCSWIQ+ D H FL GD +HP+ + +LL E++
Sbjct: 798 KIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMK 851
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 221/506 (43%), Gaps = 61/506 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A N+FDKMPQRD ++WN MI GY G ++ A LF+ MPERD+ ++N++++ +Q+
Sbjct: 92 AFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFH 151
Query: 69 QGAKEVFDGMEV----RDVVTWNSMISGYVCNGLIDEALRV-FHGMPLK-----DVVSWN 118
+ + E+F M + D T+ ++ C G+ D L + H + ++ DVV+
Sbjct: 152 RKSIEIFTKMRLLEIQHDYATFAVVLKA--CTGIEDYGLGLQVHCLAIQMGFDSDVVTGT 209
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
++ C+++D A + F EM R+ W+ ++ G VR R E KL+ M + +
Sbjct: 210 ALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGV 269
Query: 179 WNLMIAGYLDNGCVGV-AEDLFQKMHDRDLTS--------WKQLINGLVNSRRIDAAISY 229
A C G+ A +L ++H L + ++ R+ A
Sbjct: 270 SQATFASAF-RSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKV 328
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEA--------HSYL--EKYPYSNIASWTNVIVGY 279
F P ++ N++I R V EA SYL ++ S + + I GY
Sbjct: 329 FNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGY 388
Query: 280 FE-----------------------------MGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
E G + A +F+ M +D WN +I
Sbjct: 389 LEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAH 448
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+N+ EE L FV M S PD+ TF SV+ C+ L+ G ++H + IK
Sbjct: 449 EQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDW 508
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
V +A+I MY +CG + A + +SWNSII G + E AL F RM
Sbjct: 509 FVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQV 568
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGR 456
PD+ T+ VL C+ V+ G+
Sbjct: 569 GVIPDNFTYATVLDICANLATVELGK 594
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 136/570 (23%), Positives = 244/570 (42%), Gaps = 63/570 (11%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+F N ++ + N+ A VFD M RDV++WN+MI GY G ++ A +F MP
Sbjct: 73 VFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPE 132
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMG----ARDVASWTIMV---NGLVREGRIVEA 164
+DVVSWN ++ + + F +M D A++ +++ G+ G ++
Sbjct: 133 RDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQV 192
Query: 165 RKLFDKMP-AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
L +M DV ++ Y + A ++F +M +R+ W +I G V + R
Sbjct: 193 HCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRF 252
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNG-------LVKEAHSYLEK--YPYSNIASWTN 274
+ +K M + + + R+ L + H+Y K + Y NI T
Sbjct: 253 TEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVG-TA 311
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+ Y + + A KVF N +I G D E L+ F +++S D
Sbjct: 312 TLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFD 371
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ + LT CS + G Q+H A+K + V+N ++ MYA+CG + A L F
Sbjct: 372 EISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFD 431
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA----- 449
+ I D +SWN+II + + E+ L LF M + +PDD TF V+ AC+
Sbjct: 432 DMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNY 491
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE------------------- 490
G+ GR M +F+ + ++D+ + G++ E
Sbjct: 492 GMEVHGRVIKSGMGLDWFVG------SAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSI 545
Query: 491 ------------AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
A++ + + G+ + +L C +++G+ ++++L+
Sbjct: 546 ISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQL 605
Query: 539 NNSGVYLILT--EMYLSCGRREDAKRIFAQ 566
+S VY+ T +MY CG +D++ +F +
Sbjct: 606 -HSDVYIASTIVDMYSKCGNMQDSRIMFEK 634
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC------------- 383
TF+ + CS+L ++ G+Q HAQ VSN ++ Y +C
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 384 ------------------GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
GN++ A F S+P D++SWNS++ +G+ K++E+F
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQGR-YYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
+MRL + + D TF VL AC+ G+ D G C+ + T +VD+
Sbjct: 160 KMRLLEIQHDYATFAVVLKACT--GIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYST 217
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
+D A N+ E+ E + W A++
Sbjct: 218 CKKLDHAFNIFCEMP----ERNSVCWSAVIAG 245
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 199/617 (32%), Positives = 322/617 (52%), Gaps = 55/617 (8%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
T N I Y K L A FNQ E ++F++N +IA + + A +FD +
Sbjct: 42 STYLSNHFILLYSKCNLLTTAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIP 101
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAES 135
D+V++N++I+ Y G AL +F M + D +++ VI A N
Sbjct: 102 QPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHV------- 154
Query: 136 YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
GL+R+ + FD V N ++ Y NG + A
Sbjct: 155 ------------------GLIRQLHSLAFSSGFDSY----VSVKNSLLTYYSKNGILEEA 192
Query: 196 EDLFQKMHD--RDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKTWNSIISVLIRNG 252
E +F M + RD SW +I +R A++ ++ M E ++ SVL
Sbjct: 193 EMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFS 252
Query: 253 LVKEAHSYLEKYPYS-------NIASWTNVIVGYFEMGE-VGSAIKVFELMTTRDVTVWN 304
V++ L+ + + N + +I Y + G + + KVFE + D+ VWN
Sbjct: 253 CVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWN 312
Query: 305 VMIFGLGEN-DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
MI G +N +L E L+ F QM+ +G PD+ +F ++ CS+L + G+Q HA A+K
Sbjct: 313 TMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMK 372
Query: 364 --IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
I NQ + V+NA++TMY++CGN+Q A F +P H+ ++ NSII G A HG ++L
Sbjct: 373 SEIPSNQIS-VNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESL 431
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
LFE+M P IT V +LSAC++ G V++G+ YF+ MK+ + ++P + HY+C++DL
Sbjct: 432 NLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDL 491
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSP--TVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
LGR G + EA L+ D + SP W ALLGACR + N+++ E A + ++LEP
Sbjct: 492 LGRAGKLSEAERLI-----DTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPT 546
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
N+ Y++L MY + + E+A RI M++ G++K+PGCSWI++N HVF++ D+SHP+
Sbjct: 547 NAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPR 606
Query: 600 FHRLRYLLNLLHTEIER 616
+ L+ + +++R
Sbjct: 607 IKEIHMYLDEMFVKMKR 623
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 210/474 (44%), Gaps = 50/474 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNT 57
+ + I A +LFD++PQ D V++N +I Y G +A+ LF +M E D FT++
Sbjct: 86 KESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSG 145
Query: 58 VIA------GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-- 109
VI GL++ + FD V NS+++ Y NG+++EA VF+GM
Sbjct: 146 VITACCNHVGLIRQLHSLAFSSGFDSY----VSVKNSLLTYYSKNGILEEAEMVFNGMGE 201
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
++D VSWN +I A +R A + +++M R + ++ VE
Sbjct: 202 EVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGL 261
Query: 170 KMPAKDVQA--------WNLMIAGYLDNGCVGVAED--LFQKMHDRDLTSWKQLINGLVN 219
+ AK ++ + +I Y G G++E +F+++ DL W +I+G
Sbjct: 262 QFHAKAIKTGFNKNRHVGSGLIDMYAKCG-AGMSESRKVFEEICGSDLVVWNTMISGYSQ 320
Query: 220 SRRIDA-AISYFKQM------PETCEKTWN-SIISVLIRNGLVKEAHSYLEK--YPYSNI 269
++ + A+ F+QM P+ C S S L K+ H+ K P + I
Sbjct: 321 NKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQI 380
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
+ ++ Y + G + A K+F+ M + N +I G ++ +G E L F QM +
Sbjct: 381 SVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAA 440
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA-----MITMYARCG 384
+P + T S+L+ C+ ++ G++ + ++ F A MI + R G
Sbjct: 441 SIAPTSITLVSILSACAHTGRVEEGKKY----FNMMKDIFGIEPEAEHYSCMIDLLGRAG 496
Query: 385 NIQSALLEFSSVPIHD-IISWNSIICGLAYHG---YAEKALELFERMRLTDFKP 434
+ A ++P +W +++ +G AEKA F ++ T+ P
Sbjct: 497 KLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVP 550
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 169/411 (41%), Gaps = 56/411 (13%)
Query: 207 LTSWKQLINGLVNSRRIDAAIS----YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLE 262
L S++Q++ + ++ + S Y K + + N I + + L+ AH
Sbjct: 8 LQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFN 67
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ N+ S+ +I Y + + A +F+ + D+ +N +I + L
Sbjct: 68 QTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSL 127
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F +M+E G D TF+ V+T C + + L RQ+H+ A + + +V N+++T Y++
Sbjct: 128 FGEMREMGLVMDGFTFSGVITACCN--HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSK 185
Query: 383 CGNIQSALLEFSSV--PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
G ++ A + F+ + + D +SWNS+I H KAL L+ M F+ D T
Sbjct: 186 NGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLA 245
Query: 441 GVLSACSYAGLVDQG-RYYFDCMKNKYFLQPRSAHY-TCVVDLLGRFGL-IDEAMNLLNE 497
VL+ S + G +++ +K + ++ H + ++D+ + G + E+ + E
Sbjct: 246 SVLTTFSCVEDLSGGLQFHAKAIKTGF---NKNRHVGSGLIDMYAKCGAGMSESRKVFEE 302
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM----------------------- 534
I + VW ++ + + V + R M
Sbjct: 303 ICGSDL----VVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLS 358
Query: 535 ---------------ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
E+ N V L MY CG +DA+++F +M ++
Sbjct: 359 SPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQH 409
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 209/742 (28%), Positives = 348/742 (46%), Gaps = 133/742 (17%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-------------- 49
R+ A +LF +MP R+ V WN+MI G+ K G+ A+ F M +
Sbjct: 275 GRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVL 334
Query: 50 -------------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
+++ +++++ + ++ AK+VFD + ++VV
Sbjct: 335 SAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVV 394
Query: 85 TWNSMISGYVCNGLIDEALRVF----------------------------------HGMP 110
WN+M+ GYV NG +E + +F H +
Sbjct: 395 LWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVI 454
Query: 111 LKDVVSWNLVIG-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
+K+ + NL +G ALV+ ++ A F+ + RD SW +++ G V+E VEA
Sbjct: 455 IKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAF 514
Query: 166 KLFDKM--------------------------PAKDVQAWNL-------------MIAGY 186
LF +M K V ++ +I Y
Sbjct: 515 HLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMY 574
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM----PETCEKTWN 242
G + A + M +R + S LI G ++ A++ F+ M + E T+
Sbjct: 575 AKCGAIDSAHKILACMPERSVVSMNALIAGYAQIN-LEQAVNLFRDMLVEGINSTEITFA 633
Query: 243 SIISVLIRN---GLVKEAHSYLEKYPYSNIASWTNV-IVGYF--EMGEVGSAIKVFELMT 296
S++ L ++ HS + K + V ++G + + +++ E
Sbjct: 634 SLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSN 693
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+ VW MI GL +ND L+ + +M+ PD ATF S L C+ + ++ G +
Sbjct: 694 PKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTE 753
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP-IHDIISWNSIICGLAYHG 415
H+ + S+A++ MYA+CG+++S++ F + D+ISWNS+I G A +G
Sbjct: 754 THSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNG 813
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
YAE AL +F+ M+ + PDD+TF+GVL+ACS++G V +GR FD M N Y +QPR+ H
Sbjct: 814 YAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHC 873
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
C+VDLLGR+G + EA +N++ E VW +LGACRIH + G+ A E+++E
Sbjct: 874 ACMVDLLGRWGSLKEAEEFINKLN---FEPDAKVWATMLGACRIHGDDIRGQQAAEKLIE 930
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
LEP NS Y++L+ +Y + G ++ + +M+E GVKK PGCSWI + ++F++GD
Sbjct: 931 LEPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAGDK 990
Query: 596 SHPKFHRLRYLLNLLHTEIERE 617
SH + +L L T + RE
Sbjct: 991 SHHSASEIDAILKDL-TPLMRE 1011
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 158/614 (25%), Positives = 285/614 (46%), Gaps = 82/614 (13%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAM----CLFNQMPERDMFTYNTVI 59
A + A+ F ++ +D + WN ++ + K GF + L+N + FT+ V+
Sbjct: 108 ADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVL 167
Query: 60 AGLMQSDNVQGAKEV--------FDGMEVRDVVTWNSMISGYV-CNGLIDEALRVFHGMP 110
+ + + V+ ++V F+ + + ++I Y CN L D A +F G
Sbjct: 168 SSCARLEMVKCGRQVHCNVVKMGFESISYCE----GALIGMYAKCNFLTD-ARSIFDGAV 222
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEM----GARDVASWTIMVNGLVREGRIVEARK 166
D VSW +IG + + A F+EM D ++ ++N V GR+ A
Sbjct: 223 ELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASD 282
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
LF +MP ++V AWNLMI+G+ G A + FQ M + S + + ++++ AA
Sbjct: 283 LFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAA 342
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVG 286
+ + GL+ A + L++ +SN+ ++++ Y + G++
Sbjct: 343 LDF----------------------GLLVHAEA-LKQGLHSNVYVGSSLVSMYAKCGKME 379
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
+A KVF+ + ++V +WN M+ G +N E ++ F MK G PD+ T++S+L+ C+
Sbjct: 380 AAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACA 439
Query: 347 DLPTLDLGRQIHAQAI--KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
L LDLG Q+H+ I K A N F V NA++ MYA+ G ++ A +F + D +SW
Sbjct: 440 CLKYLDLGHQLHSVIIKNKFASNLF--VGNALVDMYAKSGALEDARQQFELIRNRDNVSW 497
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
N II G +A LF RM L PD+++ +LSAC+ ++QG+ C+
Sbjct: 498 NVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGK-QVHCLSV 556
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLID------------------------------EAMNL 494
K + + + ++D+ + G ID +A+NL
Sbjct: 557 KTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINLEQAVNL 616
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV--MELEPNNSGVYLILTEMYL 552
++ +GI + + +LL AC + +G + M L+ ++ + + L MY+
Sbjct: 617 FRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYM 676
Query: 553 SCGRREDAKRIFAQ 566
+ R DA +F++
Sbjct: 677 NSLRTTDASVLFSE 690
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 164/365 (44%), Gaps = 24/365 (6%)
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEK--TWNSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
L N L S+++ S F ++P+ + T N II H+ K + +
Sbjct: 48 LQNCLQKSKQVKTH-SLFDEIPQRLSQFSTTNKII------------HAQSLKLGFWSKG 94
Query: 271 SWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
NVIV Y + +V A + F+ + +D+ WN ++ + +K+F + S
Sbjct: 95 VLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNS 154
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G P+ TF VL+ C+ L + GRQ+H +K+ + A+I MYA+C + A
Sbjct: 155 GVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDA 214
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F D +SW S+I G G E+A+++F+ M +PD + FV V++A
Sbjct: 215 RSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDL 274
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
G +D F M N+ + + ++ + G EA+ +R GI+ + +
Sbjct: 275 GRLDNASDLFSRMPNRNVVA-----WNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRST 329
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQM 567
G++L A + G + ++ + +S VY+ L MY CG+ E AK++F +
Sbjct: 330 LGSVLSAIASLAALDFGLLVHAEALK-QGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTL 388
Query: 568 KENGV 572
E V
Sbjct: 389 NEQNV 393
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 130/545 (23%), Positives = 233/545 (42%), Gaps = 87/545 (15%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER----D 51
++ +++A+ F+ + RD V+WNV+I GY + A LF +M P+
Sbjct: 475 KSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLAS 534
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+ + + GL Q V V G E + + + +S+I Y G ID A ++ MP
Sbjct: 535 ILSACASVRGLEQGKQVH-CLSVKTGQETK-LYSGSSLIDMYAKCGAIDSAHKILACMPE 592
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
+ VVS N +I ++ A + F++M + S I L+ E +KL
Sbjct: 593 RSVVSMNALIAGYAQIN-LEQAVNLFRDMLVEGINSTEITFASLLDACH--EQQKL---N 646
Query: 172 PAKDVQAWNLMIAGYLDNGCVGV--------------AEDLFQKMHD-RDLTSWKQLING 216
+ + + L + LD+ +GV A LF + + + W +I+G
Sbjct: 647 LGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISG 706
Query: 217 LVNSRRIDAAISYFKQMPETC-----EKTWNSIISVL-----IRNGLVKEAHSYLEKYPY 266
L + A+ +K+M +C + T+ S + I++G E HS + +
Sbjct: 707 LSQNDCSVVALQLYKEM-RSCNVLPDQATFVSALRACAVVSSIKDG--TETHSLIFHTGF 763
Query: 267 SNIASWTNVIVG-YFEMGEVGSAIKVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFV 324
+ ++ +V Y + G+V S+++VF+ M+ +DV WN MI G +N E+ L+ F
Sbjct: 764 DSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFD 823
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA-MITMYARC 383
+MK+S +PD+ TF VLT CS + GR I + + Q A M+ + R
Sbjct: 824 EMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRW 883
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G+++ +A E ++ +F+PD + +L
Sbjct: 884 GSLK-------------------------------EAEEFINKL---NFEPDAKVWATML 909
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPR-SAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
AC G +G+ + + L+P+ S+ Y + ++ G DE L E+R G
Sbjct: 910 GACRIHGDDIRGQQAAEKLIE---LEPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKG 966
Query: 503 IEVSP 507
++ P
Sbjct: 967 VKKLP 971
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 195/644 (30%), Positives = 319/644 (49%), Gaps = 56/644 (8%)
Query: 21 TVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
+ T++ M+ + K G + +A LF MPE+ + +Y T++ LM+ +V+ A E+++ +
Sbjct: 149 SFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPL 208
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLA--- 133
V + +MISG+V N L +A VF M +VV+ VI A V DLA
Sbjct: 209 HSVAFFTAMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGV 268
Query: 134 ---------------------------------ESYFKEMGARDVASWTIMVNGLVREGR 160
F +M RDV SWT +++ G
Sbjct: 269 VGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGD 328
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD----------RDLTSW 210
+ AR++ D MPA++ +W +IA + G A L+ +M + S
Sbjct: 329 LDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSA 388
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
+ L RI A + K T +S+I + + A P N
Sbjct: 389 CATLQDLRGGTRIHA--NALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTV 446
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
W ++I GY G++ A +F M R+ WN MI G EN + L +F M SG
Sbjct: 447 CWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASG 506
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
P T +SVL C++L +L++GR +HA+ +K+ + A+ MYA+ G++ S+
Sbjct: 507 HIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSGDLDSSR 566
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F +P + I+W +++ GLA +G+AE+++ LFE M P++ TF+ +L ACS+ G
Sbjct: 567 RVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCG 626
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
LV+Q +YF+ M+ + + P+S HYTC+VD+L R G + EA LL ++ + E+ + W
Sbjct: 627 LVEQAIHYFETMQ-AHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSS---ELDTSSW 682
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
+LL AC + N ++GE A +++ ELE +N+ Y++L+ MY SCG+ +DA M+
Sbjct: 683 SSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQGA 742
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
+KK+ GCSW+Q+ H F S HP + +L+LL E+
Sbjct: 743 SLKKDAGCSWLQLRGQYHAFFSWKEKHPLSLEIYEILDLLMLEL 786
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 123/269 (45%), Gaps = 52/269 (19%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------P-------- 48
N ++ EA+ LF+KMP R++V+WN MI GY +N +A+ F M P
Sbjct: 458 NGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSV 517
Query: 49 -------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDV 83
E ++F + +S ++ ++ VF M ++
Sbjct: 518 LLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSGDLDSSRRVFYQMPEKNN 577
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-----LVIGALVNCQRMDLAESYFK 138
+TW +M+ G NG +E++ +F M +++ ++ N ++ A +C ++ A YF+
Sbjct: 578 ITWTAMVQGLAENGFAEESISLFEDM-IENGIAPNEHTFLAILFACSHCGLVEQAIHYFE 636
Query: 139 EMGARDVAS----WTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVG 193
M A + +T MV+ L R G + EA +L K+ ++ D +W+ +++
Sbjct: 637 TMQAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLLSACSTYRNKE 696
Query: 194 VAEDLFQKMH--DRDLTSWKQLINGLVNS 220
+ E +K+H ++D T+ L++ + S
Sbjct: 697 IGERAAKKLHELEKDNTAGYVLLSNMYAS 725
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 76/171 (44%), Gaps = 12/171 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
++ + ++ +F +MP+++ +TW M++G +NGF + ++ LF M E + T+
Sbjct: 558 KSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLA 617
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVT----WNSMISGYVCNGLIDEALRVFHGMPLK- 112
++ V+ A F+ M+ + + M+ G + EA + + +
Sbjct: 618 ILFACSHCGLVEQAIHYFETMQAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSEL 677
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGR 160
D SW+ ++ A + ++ E K E+ + A + ++ N G+
Sbjct: 678 DTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGK 728
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 194/650 (29%), Positives = 334/650 (51%), Gaps = 53/650 (8%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D V N MI + G LD A LF++MP+ + ++ +I+G M+ V+ + F+
Sbjct: 86 DLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNP 145
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVN--------- 126
++VV+W + ISGYV NG EA+++F + +V V++ V+ A N
Sbjct: 146 FQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMS 205
Query: 127 -----------------------CQRM---DLAESYFKEMGARDVASWTIMVNGLVREGR 160
C RM LA F M +DV SWT +++ V
Sbjct: 206 VLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDE 265
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM----HDRDLTSWKQLING 216
+ EAR++FD+MP ++ +W+ MIA Y +G + LF +M +++ + +++
Sbjct: 266 LGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSA 325
Query: 217 LVNSRRIDAAISYFKQMPET-CEK---TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW 272
L + + A ++ + + EK +S+I + + G K+ + N+ SW
Sbjct: 326 LASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSW 385
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
++ GY G + A +F +M R+ W+ +I G + + +E + F +M G
Sbjct: 386 NAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEI 445
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P+ +TF+S+L C+ +LD G+ +H + +K+ T V A+ MYA+ G+I+S+
Sbjct: 446 PNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKV 505
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSACSYAGL 451
F+ +P + +SW ++I GLA G AE++L LFE M + + P+++ F+ VL ACS++GL
Sbjct: 506 FNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGL 565
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
VD+G +YF+ M+ Y L+P+ H+TCVVD+L R G + EA I + + W
Sbjct: 566 VDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEF---IYSMPFQPETNAWA 622
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
ALL C+ + N ++ E ++ E+ N Y++L+ +Y S GR D ++ MK G
Sbjct: 623 ALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKG 682
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE--REIL 619
+KK GCSW++I D H F S D +H + + +L LL E++ +E+L
Sbjct: 683 LKKSGGCSWVEIRDRVHSFYSEDGAHSQSAEIYEILELLGYEMKCFKEVL 732
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 229/483 (47%), Gaps = 53/483 (10%)
Query: 100 DEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREG 159
D+ + F G D+V N +I A V +D A F EM + SWT +++G ++ G
Sbjct: 76 DQISKDFDGF---DLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYG 132
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL----TSWKQLIN 215
R+ E+ F++ P ++V +W I+GY+ NG A LF K+ + ++ ++ ++
Sbjct: 133 RVRESMWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVR 192
Query: 216 GLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
N +S + +T + NS+I++ +R G + A ++ ++ S
Sbjct: 193 ACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVS 252
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
WT ++ Y EM E+G A ++F+ M R+ W+ MI ++ EE L+ F +M + G
Sbjct: 253 WTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGF 312
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
P+ + F+S+L+ + + L G IH KI + VS+++I MY +CG +
Sbjct: 313 KPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRF 372
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F ++ +++SWN+++ G + +G+ E+A LF M + +++++ +++
Sbjct: 373 LFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVR----NNVSWSAIIAG------ 422
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
+ DC + DE + NE+ G + + +
Sbjct: 423 ------HLDCEQ------------------------FDEMFEVFNEMILLGEIPNKSTFS 452
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQM-KE 569
+LL AC ++ G+ ++++L ++ V LT+MY G E +K++F +M K+
Sbjct: 453 SLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKK 512
Query: 570 NGV 572
N V
Sbjct: 513 NEV 515
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 188/581 (32%), Positives = 308/581 (53%), Gaps = 34/581 (5%)
Query: 67 NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV------ 120
N+ A+ +F+ +++ + +N +I + NG +A+ +F + + + N
Sbjct: 81 NLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFK 140
Query: 121 -IGALVNCQRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
IG L + + + + G D +++ GR+ R++F++MP +DV +
Sbjct: 141 AIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVS 200
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS---------- 228
WN++I+GY+ A D+F++M + +S + +V++ A+
Sbjct: 201 WNVLISGYVKCRRYEDAVDVFRRMQQQ--SSLRPNEATVVSTLSACIALKMLELGKEIHR 258
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
Y ++ K N+++ + + G + A P + WT+++ GY G++ A
Sbjct: 259 YVREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEA 318
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
++FE RDV +W MI G + + ++ + F +M+ SPD T ++LT C+ L
Sbjct: 319 RELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQL 378
Query: 349 PTLDLGRQIHAQAIKIARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
TL+ G+ IH I N+ V A+I MYA+CG I+ +L F+ + D SW
Sbjct: 379 GTLEQGKWIHGY---IDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWT 435
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNK 465
SIICGLA +G KALELF M T KPDDITF+GVLSACS+ GLV++GR +F M
Sbjct: 436 SIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAV 495
Query: 466 YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKV 525
Y ++P+ HY C++DLLGR G +DEA L+ + EV ++GALL ACR H N+++
Sbjct: 496 YQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEM 555
Query: 526 GEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
GE +R++ +E +S V+ +L +Y S R ED ++ +MK+ GVKK PGCS +++N
Sbjct: 556 GERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNG 615
Query: 586 GGHVFLSGDSSHPKFHRL--------RYLLNLLHTEIEREI 618
H FL GD+SHP+ + + LL L E+E EI
Sbjct: 616 IVHEFLVGDASHPEMREIYSMLDSIAKPLLGLDENEMEGEI 656
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 220/483 (45%), Gaps = 68/483 (14%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGLMQ 64
A+ +F+ + +N++I+ + KNG A+ LF Q+ E D FTY V +
Sbjct: 85 AERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGC 144
Query: 65 SDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
V+ ++V+ G+E D NS++ Y G + +VF MP +DVVSWN+
Sbjct: 145 LGEVREGEKVYGFVVKSGLEF-DTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNV 203
Query: 120 VIGALVNCQRMDLAESYFKEMG----------------------------------ARDV 145
+I V C+R + A F+ M R+
Sbjct: 204 LISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQ 263
Query: 146 ASWTIMV-NGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
+TI + N LV + G + AR++F+ MP K V W M++GY++ G + A +LF+
Sbjct: 264 LGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFE 323
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVLIRNGLV 254
+ RD+ W +ING V R D A++ F++M P+ T ++++ + G +
Sbjct: 324 RSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPD--RFTLVALLTGCAQLGTL 381
Query: 255 KEA---HSYL-EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
++ H Y+ E + T +I Y + G + ++++F + +D W +I GL
Sbjct: 382 EQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGL 441
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
N + L+ F +M ++G PD+ TF VL+ CS ++ GR+ H +++
Sbjct: 442 AMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRK-HFRSMTAVYQIEP 500
Query: 371 TVSN--AMITMYARCGNIQSA--LLEFSSVPIHDIIS--WNSIICGLAYHGYAEKALELF 424
+ + +I + R G + A L+E S +++I + +++ HG E +
Sbjct: 501 KLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVA 560
Query: 425 ERM 427
+R+
Sbjct: 561 KRL 563
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 141/309 (45%), Gaps = 51/309 (16%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYN--TVIAG 61
R+Q + +F++MPQRD V+WNV+I GY K ++A+ +F +M ++ N TV++
Sbjct: 181 GRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVST 240
Query: 62 L-------------------------------------MQSDNVQGAKEVFDGMEVRDVV 84
L + ++ A+E+F+ M ++ V+
Sbjct: 241 LSACIALKMLELGKEIHRYVREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVI 300
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
W SM+SGYV G +DEA +F P++DVV W +I V R D A + F+EM +
Sbjct: 301 CWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKR 360
Query: 145 VA----SWTIMVNGLVREGRIVEARKLFDKMPAK----DVQAWNLMIAGYLDNGCVGVAE 196
V+ + ++ G + G + + + + + D +I Y G + +
Sbjct: 361 VSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSL 420
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNG 252
++F + ++D SW +I GL + + A+ F +M +T K T+ ++S G
Sbjct: 421 EIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGG 480
Query: 253 LVKEAHSYL 261
LV+E +
Sbjct: 481 LVEEGRKHF 489
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 1/176 (0%)
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
+G + A ++F + + ++N++I +N + + F Q++E G SPDN T+ V
Sbjct: 79 IGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFV 138
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L + G +++ +K T V N+++ MYA G +Q+ F +P D+
Sbjct: 139 FKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDV 198
Query: 402 ISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+SWN +I G E A+++F RM + + +P++ T V LSAC +++ G+
Sbjct: 199 VSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGK 254
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 191/608 (31%), Positives = 311/608 (51%), Gaps = 56/608 (9%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N +I Y K + NA LF+ D + N ++AG ++S ++ A+ +F+ M ++ V
Sbjct: 91 NSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCV 150
Query: 85 TWNSMISGYVCNGLIDEALRVFHGM----------PLKDVVSWNLVIGALVNCQRMDLAE 134
++ +M+ G N EA+ VF M L V+S +G ++NC RM A
Sbjct: 151 SYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNC-RMLHAL 209
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
S+ + A ++ + T +V+ + AR LFD++P ++V WN+M+ GY +G V +
Sbjct: 210 SFKLGLEALNIVA-TNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDL 268
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET---------------CEK 239
A DLF+++ +D+ SW +I+G V R+ A+ ++ M T C +
Sbjct: 269 ARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGR 328
Query: 240 TW-----NSIISVLIRNGL-------------------VKEAHSYLEKYPYSNIASWTNV 275
T +++R G + A E +++SW +
Sbjct: 329 TMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNAL 388
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
I G+ G + A ++F+ M RDV W+ MI G +N+ + L+ F +M G P+
Sbjct: 389 ISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNE 448
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
T SV + + L TL GR H + + ++ A+I MYA+CG+I AL F
Sbjct: 449 ITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYE 508
Query: 396 VP--IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ + + WN+IICGLA HG+A +L+LF +++ KP+ ITF+GVLSAC +AGLVD
Sbjct: 509 IQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVD 568
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
G YF MKN Y ++P HY C++DLLGR G + EA + IR ++ +WG L
Sbjct: 569 TGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEM---IRKMPMKADVVIWGTL 625
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
L ACR H N+++GE A E + +L+ ++ ++L+ +Y GR +DA + M+ +K
Sbjct: 626 LAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMK 685
Query: 574 KEPGCSWI 581
K PGCS +
Sbjct: 686 KSPGCSGV 693
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 219/511 (42%), Gaps = 57/511 (11%)
Query: 105 VFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEA 164
VF L ++ N +I V C+ + A S F D S IM+ G V+ G + A
Sbjct: 78 VFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNA 137
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGC----VGVAEDL-FQKMHDRDLT-----SWKQLI 214
R LF+KMP K ++ M+ G N C +GV +D+ F + ++T S +
Sbjct: 138 RHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHV 197
Query: 215 NGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTN 274
G++N R + A FK E +++ + + A ++ P N+ +W
Sbjct: 198 GGILNCRMLHAL--SFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNV 255
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ GY + G V A +FE + +DV W +I G + + E L+ + M +G P+
Sbjct: 256 MLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPN 315
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+++ C + G+Q H ++ + + + +I YA CG I A L+F
Sbjct: 316 EVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFE 375
Query: 395 -------------------------------SVPIHDIISWNSIICGLAYHGYAEKALEL 423
+P D+ SW+S+I G + + + AL+L
Sbjct: 376 LGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQL 435
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ---PRSAHY-TCVV 479
F M +P++IT V V SA + G + +GR+ ++Y L P + + ++
Sbjct: 436 FHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRW-----AHEYILSNSIPLNDNLNAALI 490
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN--NIKVGEIAGERVMELE 537
D+ + G I A+ L EI+ VSP W A++ +H N+ + + + + ++
Sbjct: 491 DMYAKCGSITIALQLFYEIQDRVSSVSP--WNAIICGLAMHGHANVSLKLFSQLQRVRIK 548
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
P NS ++ + G + ++ F MK
Sbjct: 549 P-NSITFIGVLSACCHAGLVDTGEKYFKGMK 578
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 217/513 (42%), Gaps = 100/513 (19%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+++ + A++LF+KMP + V++ M+ G +N A+ +F M + +A
Sbjct: 129 VKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLA 188
Query: 61 GLMQS---------------------------------------DNVQGAKEVFDGMEVR 81
++ + ++ A+ +FD + R
Sbjct: 189 SVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPER 248
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
+VVTWN M++GY +GL+D A +F +P KDVVSW +I V +R+ A ++ M
Sbjct: 249 NVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSML 308
Query: 142 ARDVASWTIMVNGLVRE-GRIVE-----------ARKLFD-------------------- 169
V +M+ L+ GR + R FD
Sbjct: 309 RTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEIN 368
Query: 170 ------KMPAKD-VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
++ +KD V +WN +I+G++ NG + A LF +M +RD+ SW +I+G + +
Sbjct: 369 LAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQ 428
Query: 223 IDAAISYFKQM----PETCEKTWNSIISVLIRNGLVKE---AHSYL--EKYPYSNIASWT 273
D A+ F +M + E T S+ S + G + E AH Y+ P ++ +
Sbjct: 429 PDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLN-A 487
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTR--DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
+I Y + G + A+++F + R V+ WN +I GL + LK F Q++
Sbjct: 488 ALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRI 547
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-----AMITMYARCGNI 386
P++ TF VL+ C +D G + K +N + N MI + R G +
Sbjct: 548 KPNSITFIGVLSACCHAGLVDTGEKY----FKGMKNLYNIEPNIKHYGCMIDLLGRAGRL 603
Query: 387 QSALLEFSSVPIH-DIISWNSIICGLAYHGYAE 418
+ A +P+ D++ W +++ HG E
Sbjct: 604 KEAAEMIRKMPMKADVVIWGTLLAACRTHGNVE 636
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 165/394 (41%), Gaps = 70/394 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
++ + A++LF+++P +D V+W +I GY + L A+ ++ M + +I
Sbjct: 262 KSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVD 321
Query: 62 LMQSDNVQGA---KEVFDGMEVR------------------------------------D 82
L+ + A + F G+ VR
Sbjct: 322 LISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDH 381
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
V +WN++ISG+V NG+I++A ++F MP +DV SW+ +I ++ DLA F EM A
Sbjct: 382 VSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVA 441
Query: 143 RDVASWTI-MVN--------GLVREGRIVEARKLFDKMPAKDVQAWNL---MIAGYLDNG 190
V I MV+ G + EGR L + +P D NL +I Y G
Sbjct: 442 GGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLND----NLNAALIDMYAKCG 497
Query: 191 CVGVAEDLFQKMHDR--DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSI 244
+ +A LF ++ DR ++ W +I GL + ++ F Q+ K T+ +
Sbjct: 498 SITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGV 557
Query: 245 ISVLIRNGLVKEAHSYLE--KYPYS---NIASWTNVIVGYFEMGEVGSAIKVFELMTTR- 298
+S GLV Y + K Y+ NI + +I G + A ++ M +
Sbjct: 558 LSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKA 617
Query: 299 DVTVWNVMIFGL---GENDLGEEGLKFFVQMKES 329
DV +W ++ G ++GE + ++ S
Sbjct: 618 DVVIWGTLLAACRTHGNVEIGERAAENLAKLDIS 651
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 55/261 (21%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER---- 50
+RN I++A+ LFD+MP+RD +W+ MI GY +N D A+ LF++M P
Sbjct: 393 VRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMV 452
Query: 51 DMFTYNTVIAGLMQ---------------SDNVQGA------------------KEVFDG 77
+F+ + LM+ +DN+ A E+ D
Sbjct: 453 SVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQD- 511
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLA 133
V V WN++I G +G + +L++F + + +++ V+ A + +D
Sbjct: 512 -RVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTG 570
Query: 134 ESYFKEMG-----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYL 187
E YFK M ++ + M++ L R GR+ EA ++ KMP K DV W ++A
Sbjct: 571 EKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACR 630
Query: 188 DNGCVGVAEDLFQKMHDRDLT 208
+G V + E + + D++
Sbjct: 631 THGNVEIGERAAENLAKLDIS 651
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 31/160 (19%)
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
FF K++ S T S L CS L L G+QIH+ K V N++I+ Y
Sbjct: 39 FFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYV 98
Query: 382 RC-------------------------------GNIQSALLEFSSVPIHDIISWNSIICG 410
+C G++ +A F +PI +S+ +++ G
Sbjct: 99 KCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMG 158
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
LA + +A+ +F+ MR P+++T V+SA S+ G
Sbjct: 159 LAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVG 198
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 195/645 (30%), Positives = 319/645 (49%), Gaps = 56/645 (8%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
+ T++ M+ + K G + +A LF MPE+ + +Y T++ LM+ +V+ A E+++
Sbjct: 148 SSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCP 207
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLA-- 133
+ V + +MISG+V N L +A VF M +VV+ VI A V DLA
Sbjct: 208 LHSVAFFTAMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMG 267
Query: 134 ----------------------------------ESYFKEMGARDVASWTIMVNGLVREG 159
F +M RDV SWT +++ G
Sbjct: 268 VVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLG 327
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD----------RDLTS 209
+ AR++ D MPA++ +W +IA + G A L+ +M + S
Sbjct: 328 DLYGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLS 387
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
+ L RI A + K T +S+I + + A P N
Sbjct: 388 ACATLQDLRGGTRIHA--NALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNT 445
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
W ++I GY G++ A +F M R+ WN MI G EN + L +F M S
Sbjct: 446 VCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLAS 505
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G P T +SVL C++L +L++GR +HA+ +K+ + A+ MYA+ G++ S+
Sbjct: 506 GHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSS 565
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F +P + I+W +++ GLA +G+AE+++ LFE M P++ TF+ +L ACS+
Sbjct: 566 RRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHC 625
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
GLV+Q +YF+ M+ + + P+S HYTC+VD+L R G + EA LL ++ + E+ +
Sbjct: 626 GLVEQAIHYFETMQ-AHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSS---ELDTSS 681
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
W +LL AC + N ++GE A +++ ELE +N+ Y++L+ MY SCG+ +DA M+
Sbjct: 682 WSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQG 741
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
+KK+ GCSW+Q+ H F S HP + +L+LL E+
Sbjct: 742 ASLKKDAGCSWLQLRGQYHAFFSWKEKHPLSLEIYEILDLLMLEL 786
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 123/269 (45%), Gaps = 52/269 (19%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------P-------- 48
N ++ EA+ LF+KMP R++V+WN MI GY +N +A+ F M P
Sbjct: 458 NGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSV 517
Query: 49 -------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDV 83
E ++F + +S ++ ++ VF M ++
Sbjct: 518 LLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRVFYQMPEKNN 577
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-----LVIGALVNCQRMDLAESYFK 138
+TW +M+ G NG +E++ +F M +++ ++ N ++ A +C ++ A YF+
Sbjct: 578 ITWTAMVQGLAENGFAEESISLFEDM-IENGIAPNEHTFLAILFACSHCGLVEQAIHYFE 636
Query: 139 EMGARDVAS----WTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVG 193
M A + +T MV+ L R G + EA +L K+ ++ D +W+ +++
Sbjct: 637 TMQAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLLSACSTYRNKE 696
Query: 194 VAEDLFQKMH--DRDLTSWKQLINGLVNS 220
+ E +K+H ++D T+ L++ + S
Sbjct: 697 IGERAAKKLHELEKDNTAGYVLLSNMYAS 725
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 76/171 (44%), Gaps = 12/171 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
++ + ++ +F +MP+++ +TW M++G +NGF + ++ LF M E + T+
Sbjct: 558 KSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLA 617
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVT----WNSMISGYVCNGLIDEALRVFHGMPLK- 112
++ V+ A F+ M+ + + M+ G + EA + + +
Sbjct: 618 ILFACSHCGLVEQAIHYFETMQAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSEL 677
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGR 160
D SW+ ++ A + ++ E K E+ + A + ++ N G+
Sbjct: 678 DTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGK 728
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 199/633 (31%), Positives = 324/633 (51%), Gaps = 33/633 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------ERDMFTYNTVI 59
++ A+ +FDKMP RD V+W +I+GY D AM LF+ M D + V+
Sbjct: 50 LRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSVVL 109
Query: 60 AGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
QS N+ E V+ V +S++ Y G I+++ RVF MP ++
Sbjct: 110 KACGQSSNI-AYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRNA 168
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLFDK 170
V+W +I LV+ R +YF EM + D ++ I + ++ +++
Sbjct: 169 VTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTH 228
Query: 171 MPAK--DVQAW--NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ + D W N + Y + G + LF+ M +RD+ SW LI + A
Sbjct: 229 VIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKA 288
Query: 227 ISYF-----KQMPETCEKTWNSIISV---LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+ F Q+P E+T+ ++ S L R ++ H + ++ S +N ++
Sbjct: 289 VETFIKMRNSQVPPN-EQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMK 347
Query: 279 -YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y G++ SA +F+ M RD+ W+ +I G + GEE K+F M++SGP P +
Sbjct: 348 MYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFA 407
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
S+L++ ++ L+ GRQ+HA A Q +TV + +I MY++CGNI+ A F
Sbjct: 408 LASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETD 467
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
DI+S ++I G A HG +++A++LFE+ F PD +TF+ VL+AC+++G +D G +
Sbjct: 468 RDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLGFH 527
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
YF+ M+ KY ++P HY C+VDLL R G + EA +++E+ +V VW LL AC
Sbjct: 528 YFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDV---VWTTLLIAC 584
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
+ +I+ G A ER++EL+P + + L +Y S G E+A + MK GV KEPG
Sbjct: 585 KAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPG 644
Query: 578 CSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
S I+I D F+SGD HP + +L L+
Sbjct: 645 WSSIKIKDCVSAFVSGDRFHPLSEDIYNILELV 677
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 126/536 (23%), Positives = 210/536 (39%), Gaps = 71/536 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF----NQMPERDMFTYNT 57
R +I+++ +F +MP R+ VTW +I G G + F + D FT+
Sbjct: 149 RVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAI 208
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVR--DVVTW--NSMISGYVCNGLIDEALRVFHGMPLKD 113
+ V+ K++ + VR D W NS+ + Y G + + L +F M +D
Sbjct: 209 ALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERD 268
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVEARKL-- 167
VVSW +I A + A F +M V ++ M + R+V +L
Sbjct: 269 VVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHC 328
Query: 168 --FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
F + N M+ Y G + A LFQ M RD+ SW +I G + +
Sbjct: 329 NVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEE 388
Query: 226 AISYFKQMPETCEKTWNSIISVLIR---NGLVKEAHSYLEKYPY-----SNIASWTNVIV 277
A YF M ++ K + ++ L+ N V E + + N + +I
Sbjct: 389 AFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLIN 448
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + G + A K+FE D+ MI G E+ +E + F + + G SPD+ T
Sbjct: 449 MYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVT 508
Query: 338 FTSVLTICSDLPTLDLGRQI-----HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
F SVLT C+ LDLG ++ A+ + M+ + R G + A
Sbjct: 509 FISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHY----GCMVDLLCRAGRLSEA--- 561
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
+ D +SW K DD+ + +L AC G +
Sbjct: 562 ---EKMIDEMSW----------------------------KKDDVVWTTLLIACKAKGDI 590
Query: 453 DQGRYYFDCMKNKYFLQPRSA-HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
++GR + + L P A + ++ G ++EA N+ ++A G+ P
Sbjct: 591 ERGRRAAERILE---LDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEP 643
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 135/319 (42%), Gaps = 33/319 (10%)
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP--SPDNATFTS 340
G + A +VF+ M RD+ W +I G + +E + F M+ P SPD + +
Sbjct: 48 GNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSV 107
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
VL C + G +HA A+K + V ++++ MY R G I+ + FS +P +
Sbjct: 108 VLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRN 167
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR---- 456
++W +II GL + G ++ L F M ++ D TF L AC+ V G+
Sbjct: 168 AVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHT 227
Query: 457 -------------------YYFDC--MKNKYFL-----QPRSAHYTCVVDLLGRFGLIDE 490
Y +C M++ L + +T ++ R G ++
Sbjct: 228 HVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEK 287
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS-GVYLILTE 549
A+ ++R + + + + AC + + GE V L N+S V + +
Sbjct: 288 AVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMK 347
Query: 550 MYLSCGRREDAKRIFAQMK 568
MY +CG+ + A +F M+
Sbjct: 348 MYSTCGKLDSASVLFQGMR 366
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 3/128 (2%)
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD- 431
+N+ + GN++ A F +P DI+SW +II G +++A+ LF MR+ D
Sbjct: 37 TNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDP 96
Query: 432 -FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
PD VL AC + + G K L + ++D+ R G I++
Sbjct: 97 AVSPDTSVVSVVLKACGQSSNIAYGE-SLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEK 155
Query: 491 AMNLLNEI 498
+ + +E+
Sbjct: 156 SCRVFSEM 163
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 316/566 (55%), Gaps = 25/566 (4%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVN 126
A VF ++ +++ WN+M G+ + AL+++ M L + ++ V+ +
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 127 CQRMDLAES---YFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
+ + + ++G D+ T +++ V+ GR+ +A K+FDK P +DV ++ +
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----E 238
I GY G + A+ LF ++ +D+ SW +I+G + A+ FK M +T E
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 239 KTWNSIISVLIRNG---LVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFEL 294
T +++S ++G L ++ H +++ + + SN+ +I Y + GE+ +A +FE
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+ +DV WN +I G +L +E L F +M SG +P++ T S+L C+ L +D+G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 355 RQIHAQAIKIAR--NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
R IH K + +++ ++I MYA+CG+I++A F+S+ + SWN++I G A
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
HG A+ + +LF RMR +PDDITFVG+LSACS++G++D GR+ F M Y + P+
Sbjct: 447 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKL 506
Query: 473 AHYTCVVDLLGRFGLID--EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
HY C++DLLG GL E M + E+ DG+ +W +LL AC++H N+++GE
Sbjct: 507 EHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGV-----IWCSLLKACKMHGNVELGESFA 561
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVF 590
E ++++EP N G Y++L+ +Y S GR + + A + + G+KK PGCS I+I+ H F
Sbjct: 562 ENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEF 621
Query: 591 LSGDSSHPKFHRLRYLLNLLHTEIER 616
+ GD HP+ + +L + +E+
Sbjct: 622 IIGDKFHPRNREIYGMLEEMEVLLEK 647
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 163/325 (50%), Gaps = 18/325 (5%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D++ + ++I+ +Q+ ++ A +VFD RDVV++ ++I GY G I+ A ++F +P
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 227
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNGLVREGRIVEARK 166
+KDVVSWN +I A FK+M +V ++ +V+ + G I R+
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 167 LF----DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ D +++ N +I Y G + A LF+++ +D+ SW LI G +
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 223 IDAAISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEK--YPYSNIASW- 272
A+ F++M + E T SI+ G + + H Y++K +N +S
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T++I Y + G++ +A +VF + + ++ WN MIFG + + F +M++ G
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 333 PDNATFTSVLTICSDLPTLDLGRQI 357
PD+ TF +L+ CS LDLGR I
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGRHI 492
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 146/344 (42%), Gaps = 89/344 (25%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N R+++A +FDK P RD V++ +I+GY G+++NA LF+++P +D+ ++N +I+
Sbjct: 180 VQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMIS 239
Query: 61 GLMQSDNVQGAKEVFDGMEV--------------------------RDVVTW-------- 86
G ++ N + A E+F M R V W
Sbjct: 240 GYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGS 299
Query: 87 -----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
N++I Y G ++ A +F +P KDV+SWN +IG + A F+EM
Sbjct: 300 NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML 359
Query: 141 ---------------------GARDVASW-------------------TIMVNGLVREGR 160
GA D+ W T +++ + G
Sbjct: 360 RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 419
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLING 216
I A ++F+ + K + +WN MI G+ +G + DLF +M D ++ L++
Sbjct: 420 IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Query: 217 LVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVK 255
+S +D F+ M + + T + +I +L +GL K
Sbjct: 480 CSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFK 523
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 3/138 (2%)
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI---T 378
F S P D+ L++ + TL R IHAQ IKI + + +I
Sbjct: 17 FHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCI 76
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
+ + A+ F ++ +++ WN++ G A AL+L+ M P+ T
Sbjct: 77 LSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYT 136
Query: 439 FVGVLSACSYAGLVDQGR 456
F VL +C+ + +G+
Sbjct: 137 FPFVLKSCAKSKAFKEGQ 154
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 190/657 (28%), Positives = 331/657 (50%), Gaps = 88/657 (13%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTY------ 55
++EA +FD++ + WN+++ K+G ++ LF +M E D +T+
Sbjct: 145 LKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKS 204
Query: 56 -----------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
N+++A +++ V A++VFD M RDV++W
Sbjct: 205 FSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISW 264
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESY----FK 138
NS+I+GYV NGL ++ L VF M D+ + V + + + L + K
Sbjct: 265 NSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVK 324
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+R+ +++ + G + A+ +F +M + V ++ MIAGY G G A L
Sbjct: 325 ACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV---K 255
F++M + ++ P+ T ++++ RN L+ K
Sbjct: 385 FEEMEEEGIS-------------------------PDV--YTVTAVLNCCARNRLLDEGK 417
Query: 256 EAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
H ++++ +N ++ Y + G + A VF M +D+ WN +I G +N
Sbjct: 418 RVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNC 477
Query: 315 LGEEGLKFF-VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT-- 371
E L F + + E SPD T VL C+ L D GR+IH I RN + +
Sbjct: 478 YANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGY---IMRNGYFSDR 534
Query: 372 -VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
V+N+++ MYA+CG + A L F + D++SW +I G HG+ ++A+ LF +MR
Sbjct: 535 HVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
+PD+I+FV +L ACS++GLVD+G +F+ M+++ ++P HY C+VD+L R G + +
Sbjct: 595 GIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSK 654
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
A + + I T+WGALL CRIH+++K+ E E+V ELEP N+G Y+++ +
Sbjct: 655 AYRFIENM---PIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANI 711
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
Y + E+ KR+ ++ + G++K PGCSWI+I ++F++GDSS+P+ ++ L
Sbjct: 712 YAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFL 768
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 157/578 (27%), Positives = 243/578 (42%), Gaps = 105/578 (18%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM 78
R N +R + ++G L NA+ L + + D+ + +D +K + DG
Sbjct: 59 RSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPRTLCSVLQLCAD----SKSLKDGK 114
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFK 138
EV + + N G+V + + L + + NC + A F
Sbjct: 115 EVDNFIRGN----GFVLDSNLGSKLALMY-----------------TNCGDLKEASRVFD 153
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ--------------------- 177
++ W I++N L + G + LF KM + V+
Sbjct: 154 QVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNG 213
Query: 178 ------------------AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
N ++A YL N V A +F +M +RD+ SW +ING V+
Sbjct: 214 GEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 220 SRRIDAAISYFKQMP-ETCEKTWNSIISVLIRNG------LVKEAHSYLEKYPYSNIASW 272
+ + +S F QM E +I+SV L + H + K +S +
Sbjct: 274 NGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRF 333
Query: 273 TNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
N ++ Y + G++ SA VF M+ R V + MI G L E +K F +M+E G
Sbjct: 334 CNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT-VSNAMITMYARCGNIQSAL 390
SPD T T+VL C+ LD G+++H + IK F VSNA++ MYA+CG+++ A
Sbjct: 394 SPDVYTVTAVLNCCARNRLLDEGKRVH-EWIKENDMGFDIFVSNALMDMYAKCGSMREAE 452
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD-FKPDDITFVGVLSACSYA 449
L FS + + DIISWN++I G + + YA +AL LF + + F PD+ T VL AC+
Sbjct: 453 LVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASL 512
Query: 450 GLVDQGRYYFD-CMKNKYFLQPRSA------HYTCVVDLLGRF----------------- 485
D+GR M+N YF A + C LL R
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMI 572
Query: 486 ------GLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
G EA+ L N++R GIE + +LL AC
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYAC 610
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 219/503 (43%), Gaps = 84/503 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYN 56
++N R+ A+ +FD+M +RD ++WN +I GY NG + + +F QM E D+ T
Sbjct: 241 LKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIV 300
Query: 57 TVIAGLMQS-----------------------------------DNVQGAKEVFDGMEVR 81
+V AG S ++ AK VF M R
Sbjct: 301 SVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGR 360
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC----QRMDLAESYF 137
VV++ SMI+GY GL EA+++F M + + + A++NC + +D +
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVH 420
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ + D+ + N L+ + G + EA +F +M KD+ +WN +I GY N
Sbjct: 421 EWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYAN 480
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A LF N L+ +R + C + +S +
Sbjct: 481 EALSLF---------------NLLLVEKRFSP-----DERTVACVLPACASLSAFDKG-- 518
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+E H Y+ + Y + N +V Y + G + A +F+ +T++D+ W VMI G G
Sbjct: 519 -REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGM 577
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI-----HAQAIKIARN 367
+ G+E + F QM+++G PD +F S+L CS +D G + H I+
Sbjct: 578 HGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVE 637
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYHGYAEKALELFER 426
+ + + M AR GN+ A ++PI D W +++CG H + A + E
Sbjct: 638 HYACI----VDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAE- 692
Query: 427 MRLTDFKPDDITFVGVLSACSYA 449
++ + +P++ + VL A YA
Sbjct: 693 -KVFELEPENTGYY-VLMANIYA 713
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 152/339 (44%), Gaps = 45/339 (13%)
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
SN+ S + + Y G++ A +VF+ + WN+++ L ++ + F +M
Sbjct: 129 SNLGS--KLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKM 186
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
SG D+ TF+ V S L +++ G Q+H +K + +V N+++ Y + +
Sbjct: 187 MSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRV 246
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
SA F + D+ISWNSII G +G AEK L +F +M + + D T V V + C
Sbjct: 247 DSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGC 306
Query: 447 SYAGLVDQGR-----------------------YYFDCM---KNKYFLQPRSAH----YT 476
+ + L+ GR Y C K + S YT
Sbjct: 307 ADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYT 366
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW--GALLGACRIHNNIKVGEIAGERVM 534
++ R GL EA+ L E+ +GI SP V+ A+L C + + G+RV
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGI--SPDVYTVTAVLNCCARNRLLD----EGKRVH 420
Query: 535 E-LEPNNSG----VYLILTEMYLSCGRREDAKRIFAQMK 568
E ++ N+ G V L +MY CG +A+ +F++M+
Sbjct: 421 EWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMR 459
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 326/585 (55%), Gaps = 40/585 (6%)
Query: 46 QMPERDMFTYNTVIAGLMQ----SDNVQG---AKEVFDGMEVRDVVTWNSMISGYVCNGL 98
QM + + N ++ L++ S N G A VF+ ++ +++ WN+M G+ +
Sbjct: 24 QMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSD 83
Query: 99 IDEALRVFHGMPLKDVVSWNLVIGA------LVNCQRMDLAES------YFKEMGAR-DV 145
A++++ M +S L+ + L +C ++ +++ + ++G D+
Sbjct: 84 PVSAIKLYVCM-----ISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDL 138
Query: 146 ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
T +++ V+ GR +A K+FD +DV ++ +I GY G + A+ +F ++ +
Sbjct: 139 YVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVK 198
Query: 206 DLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNG---LVKEAH 258
D+ SW +I+G ++ A+ FK+M +T E T +++S ++G L ++ H
Sbjct: 199 DVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVH 258
Query: 259 SYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
S+++ + SN+ +I Y + GEV +A +F+ ++ +DV WN MI G +L +
Sbjct: 259 SWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYK 318
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA---QAIKIARNQFTTVSN 374
E L F +M SG +P++ T S+L C+ L +D GR IH + IK N +++
Sbjct: 319 EALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNA-SSLRT 377
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
++I MYA+CG+I++A F+S+ + + N++I G A HG A A ++F RMR +P
Sbjct: 378 SLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEP 437
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
DDITFVG+LSACS++G++D GR F M Y + P+ HY C++DLLG GL EA +
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEM 497
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
+N + +E +W +LL AC++H N+++GE ++++++EP N G Y++L+ +Y +
Sbjct: 498 INTMT---MEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATA 554
Query: 555 GRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
GR + I A + + G+KK PGCS I+I+ H F+ GD HP+
Sbjct: 555 GRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPR 599
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 131/556 (23%), Positives = 239/556 (42%), Gaps = 92/556 (16%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------P-------------- 48
A ++F+ + + + + WN M RG+ + +A+ L+ M P
Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAK 115
Query: 49 -------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
E D++ + ++I+ +++ + A +VFDG RDVV++ ++
Sbjct: 116 LKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTAL 175
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV---- 145
I+GY G I+ A ++F +P+KDVVSWN +I + A FKEM +V
Sbjct: 176 ITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDE 235
Query: 146 ASWTIMVNGLVREGRIVEARKLF----DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
++ +V+ + G I R++ D +++ N +I Y G V A LFQ
Sbjct: 236 STMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQG 295
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV--- 254
+ ++D+ SW +I G + A+ F++M + E T SI+ + G +
Sbjct: 296 LSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFG 355
Query: 255 KEAHSYLEK--YPYSNIASW-TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
+ H Y++K +N +S T++I Y + G++ +A +VF M R ++ N MIFG
Sbjct: 356 RWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFA 415
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+ F +M+++G PD+ TF +L+ CS LDLGR+I
Sbjct: 416 MHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRI-------------- 461
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
+S + P + + +I L + G ++A E+ M +
Sbjct: 462 --------------FRSMTQNYKITP--KLEHYGCMIDLLGHLGLFKEAEEMINTMTM-- 503
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
+PD + + +L AC G V+ G + + P S Y + ++ G +E
Sbjct: 504 -EPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGS--YVLLSNIYATAGRWNEV 560
Query: 492 MNLLNEIRADGIEVSP 507
N+ + G++ P
Sbjct: 561 ANIRALLNDKGMKKVP 576
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 142/346 (41%), Gaps = 89/346 (25%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N R ++A +FD RD V++ +I GY G++++A +F+++P +D+ ++N +I+
Sbjct: 149 VKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIIS 208
Query: 61 GLMQSDNVQGAKEVFDGMEV--------------------------RDVVTW-------- 86
G + N + A ++F M R V +W
Sbjct: 209 GYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGS 268
Query: 87 -----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
N++I Y G ++ A +F G+ KDV+SWN +IG + A F+EM
Sbjct: 269 NLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEML 328
Query: 141 ---------------------GARDVASW-------------------TIMVNGLVREGR 160
GA D W T +++ + G
Sbjct: 329 RSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGD 388
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLING 216
I A ++F+ M + + A N MI G+ +G A D+F +M + D ++ L++
Sbjct: 389 IEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSA 448
Query: 217 LVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVKEA 257
+S +D F+ M + + T + +I +L GL KEA
Sbjct: 449 CSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEA 494
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 308/584 (52%), Gaps = 59/584 (10%)
Query: 81 RDVVTWNSMISGYVC----NGLIDEALRVFHGMPLKDVVSWNLVIGALV---NCQRMDLA 133
+D+V+ N +++ C NG ++ A ++F + ++ +NL+I A N +R +
Sbjct: 67 QDIVSLNKLMA--FCTDPFNGNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVL 124
Query: 134 ESYFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAK----DVQAWNLMIAGYLD 188
S +E G D ++ + + G + +A KL + D N +I Y
Sbjct: 125 FSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQ 184
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNS 243
V + LF +M DRD+ SW +I+G V RR + AI+ F +M E E T S
Sbjct: 185 LALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVS 244
Query: 244 IISV---LIRNGLVKEAHSYL-------------------------------EKYPYSNI 269
+S L R L K+ H Y+ E+ P N+
Sbjct: 245 TLSACTALKRLELGKKIHHYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNV 304
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
WT ++ GY GE+ A ++FE RDV +W MI G + + +E + F +M+
Sbjct: 305 ICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIR 364
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF---TTVSNAMITMYARCGNI 386
PD S+LT C+ ++ G+ IH I N+ V A+I MYA+CG I
Sbjct: 365 KVKPDKFIVVSLLTGCAQTGAIEQGKWIHEF---IDENRIPIDAVVGTALIEMYAKCGFI 421
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
+ AL F + + D SW SIICGLA +G KALELF +M+ +PDDITF+GVLSAC
Sbjct: 422 EKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSAC 481
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
S+ GLV++GR +F+ M+ +Y ++P+ HY C+VDLLGR GL++EA L+ +I + ++
Sbjct: 482 SHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAIT 541
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
++G+LL ACRI+ N+++GE +++++ E ++S V+ +L +Y R ED ++ +
Sbjct: 542 VPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRK 601
Query: 567 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
MK+ GVKK PGCS I+++ H F SG SHP+ + Y+LN++
Sbjct: 602 MKDLGVKKTPGCSSIEVDSIIHEFFSGHPSHPEMREIYYMLNIM 645
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 192/412 (46%), Gaps = 61/412 (14%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTV 58
N + A+ +F + + +N++I+ + K G + LF+++ E D FTY V
Sbjct: 84 NGNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFV 143
Query: 59 IAGL------MQSDNVQG-----------------------------AKEVFDGMEVRDV 83
+ +++ ++G K +FD M RDV
Sbjct: 144 FKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDV 203
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMP-----LKDVVSWNLVIGALVNCQRMDLAESYFK 138
++WN MISGYV ++A+ VF M + D + + A +R++L +
Sbjct: 204 ISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHH 263
Query: 139 EMGARDVASWT-IMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ RD +T I+ N L+ + G + AR +F++MP+K+V W M++GY + G +
Sbjct: 264 YV--RDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELE 321
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI---- 249
A +LF+ RD+ W +ING V R D A++ F++M K I+ L+
Sbjct: 322 EARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCA 381
Query: 250 RNGLVKEA---HSYLE--KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
+ G +++ H +++ + P + T +I Y + G + A+++F + +D W
Sbjct: 382 QTGAIEQGKWIHEFIDENRIPIDAVVG-TALIEMYAKCGFIEKALEIFYGLRVKDTASWT 440
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+I GL N + L+ F +MK++G PD+ TF VL+ CS ++ GR+
Sbjct: 441 SIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRK 492
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 170/422 (40%), Gaps = 80/422 (18%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERD--MFTYNTVIAGLMQS---- 65
LFD+MP RD ++WNVMI GY K ++A+ +F +M E M TV++ L
Sbjct: 194 LFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALK 253
Query: 66 -------------DNVQG--------------------AKEVFDGMEVRDVVTWNSMISG 92
DNV+ A+ VF+ M ++V+ W +M+SG
Sbjct: 254 RLELGKKIHHYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSG 313
Query: 93 YVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV 152
Y G ++EA +F G P++DVV W +I V R D A + F+EM R V +V
Sbjct: 314 YANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIV 373
Query: 153 ---------NGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
G + +G+ + +++P D +I Y G + A ++F +
Sbjct: 374 VSLLTGCAQTGAIEQGKWIHEFIDENRIPI-DAVVGTALIEMYAKCGFIEKALEIFYGLR 432
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHS 259
+D SW +I GL + + A+ F +M + + T+ ++S GLV+E
Sbjct: 433 VKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRK 492
Query: 260 YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+ E V + ++ LG L E
Sbjct: 493 FFNSMR--------------------------MEYQIKPKVEHYGCLVDLLGRAGLLNEA 526
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
+ ++ + + + S+L+ C +++G ++ Q +K + ++V + +
Sbjct: 527 EELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSD-SSVHTLLANI 585
Query: 380 YA 381
YA
Sbjct: 586 YA 587
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 153/346 (44%), Gaps = 39/346 (11%)
Query: 19 RDTVTW-----NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKE 73
RD V + N ++ Y K G L A +F +MP +++ + T+++G ++ A+E
Sbjct: 266 RDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARE 325
Query: 74 VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-LVIGALVNCQRMDL 132
+F+G +RDVV W +MI+GYV DEA+ +F M ++ V +V+ L C +
Sbjct: 326 LFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGA 385
Query: 133 AE--SYFKEMGAR-----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
E + E D T ++ + G I +A ++F + KD +W +I G
Sbjct: 386 IEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICG 445
Query: 186 YLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQM-------P 234
NG A +LF KM D ++ +++ + ++ +F M P
Sbjct: 446 LAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKP 505
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNV---------IVGYFEMGE- 284
+ + + ++ +L R GL+ EA ++K P N A + I G EMGE
Sbjct: 506 KV--EHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGER 563
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
V + FE + D +V ++ D E+ K +MK+ G
Sbjct: 564 VAKQLVKFE---SSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLG 606
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 17/235 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
++EA+ LF+ P RD V W MI GY + D A+ LF +M R D F +++ G
Sbjct: 320 LEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTG 379
Query: 62 LMQSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
Q+ ++ K + + ++ D V ++I Y G I++AL +F+G+ +KD SW
Sbjct: 380 CAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASW 439
Query: 118 NLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKLFDKMPA 173
+I L + A F +M G R D ++ +++ G + E RK F+ M
Sbjct: 440 TSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRM 499
Query: 174 K-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
+ V+ + ++ G + AE+L +K+ D + L L+++ RI
Sbjct: 500 EYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRI 554
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 201/640 (31%), Positives = 317/640 (49%), Gaps = 71/640 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-----ERDMFTYNTVIA 60
I A+ FD++ +D TWN MI Y + G A+ FN+ + D +T+ VI
Sbjct: 91 IPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIR 150
Query: 61 GLMQSDN--------------------------------VQGAKEVFDGMEVRDVVTWNS 88
D+ V A +FD M +RD+ TWN+
Sbjct: 151 ACGNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNA 210
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMD------LAESYFKEMG 141
MISG+ NG + EAL VF M K V ++ I +L+ C ++D L Y ++G
Sbjct: 211 MISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLG 270
Query: 142 AR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
D+ ++N + G + A +F++M +D+ +WN ++A + N +A ++
Sbjct: 271 LEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYN 330
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
KMH + L+ LV+ + A + F +S +G V +
Sbjct: 331 KMHSIGVVP--DLLT-LVSLASVAAELGNF--------------LSSRSIHGFVTRRCWF 373
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
L +IA +I Y ++G + SA KVFE + +DV WN +I G +N L E +
Sbjct: 374 LH-----DIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAI 428
Query: 321 KFFVQMKE-SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
+ M+ SG P+ T+ S+LT S L L G + H Q IK VS ++ M
Sbjct: 429 DVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDM 488
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y +CG + AL F VP +SWN+II HGY KA++LF+ M+ KPD ITF
Sbjct: 489 YGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITF 548
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
V +LSACS++GLVD+G++ F M+ Y ++P HY C+VDL GR G +++A N + +
Sbjct: 549 VSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNM- 607
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRED 559
+ +VWGALLGACRIH N+++ + ++++E N G Y++L+ +Y G E
Sbjct: 608 --PVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEG 665
Query: 560 AKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
+ + ++ G+KK PG S I+++ VF +G+ +HPK
Sbjct: 666 VDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPK 705
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 14/191 (7%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F + C+ + L +Q+HA + + Q +S +I YA G+I A L F +
Sbjct: 46 FNRIFLYCTKV---HLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQ 102
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDF-KPDDITFVGVLSACSYAGLVDQGR 456
D+ +WNS+I A G+ A++ F T F + D TF V+ AC G +D GR
Sbjct: 103 TKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGR 159
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
C+ K + + RFG + A NL + + I W A++
Sbjct: 160 -KVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDI----GTWNAMISG 214
Query: 517 CRIHNNIKVGE 527
+ N KV E
Sbjct: 215 --FYLNGKVAE 223
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 89/195 (45%), Gaps = 16/195 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ ++ +A +LF ++P + +V+WN +I + +G+ A+ LF +M D T+ +
Sbjct: 491 KCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVS 550
Query: 58 VIAGLMQSDNVQGAKEVFDGME----VRDVVT-WNSMISGYVCNGLIDEALRVFHGMPLK 112
+++ S V + F M+ +R + + M+ + G +++A MP++
Sbjct: 551 LLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVR 610
Query: 113 -DVVSWNLVIGALVNCQRMDLAES---YFKEMGARDVASWTIMVNGLVREGR---IVEAR 165
DV W ++GA + ++L + + ++ + +V + ++ N + G + E R
Sbjct: 611 PDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVR 670
Query: 166 KLFDKMPAKDVQAWN 180
L K W+
Sbjct: 671 SLARDRGLKKTPGWS 685
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 200/660 (30%), Positives = 324/660 (49%), Gaps = 74/660 (11%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGA----KEVF 75
D N +I Y K G ++ A+ +F MPER++ ++N++I G ++ +Q + +E+
Sbjct: 135 DVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREML 194
Query: 76 DGME--VRDVVTWNSMISGYVCNGLID-EALRVFHGMPLK-----DVVSWNLVIGALVNC 127
G E V DV T +++ VC G D E HG+ +K +++ N +I C
Sbjct: 195 VGEESFVPDVATLVTVLP--VCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKC 252
Query: 128 QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ---------- 177
+ + A+ F + +++ SW M+ G RE + L KM +D +
Sbjct: 253 RFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILN 312
Query: 178 --------------------AW-----------NLMIAGYLDNGCVGVAEDLFQKMHDRD 206
+W N IA Y G + +E +F M +
Sbjct: 313 VLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKT 372
Query: 207 LTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKTWNSIISVLIRNGLVKEAHSYLEKY- 264
++SW L+ G + A+ + QM ++ + W +I S+L+ +K H E +
Sbjct: 373 VSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHG 432
Query: 265 ----------PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
P+ I+ ++ Y G+ +A +F+ M R + WNVMI G +N
Sbjct: 433 FALRNGLAVDPFIGIS----LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNG 488
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
L +E + F QM G P V CS L L LG+++H A+K + VS+
Sbjct: 489 LPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSS 548
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
++I MYA+ G I + F + D+ SWN II G HG ++ALELFE+M KP
Sbjct: 549 SIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKP 608
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
DD TF G+L ACS+AGLV+ G YF+ M N + ++P+ HYTCVVD+LGR G ID+A+ L
Sbjct: 609 DDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRL 668
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
+ E+ D +W +LL +CRIH N+ +GE +++ELEP Y++++ ++
Sbjct: 669 IEEMPGDP---DSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGS 725
Query: 555 GRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
G+ +D +R+ +MK+ G++K+ GCSWI++ H FL GD P+ +R L +I
Sbjct: 726 GKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKI 785
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 155/623 (24%), Positives = 271/623 (43%), Gaps = 99/623 (15%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVI-- 59
+++ +FDK+ +++ WN ++ Y +N ++AM +F+++ + D FT VI
Sbjct: 51 SDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKA 110
Query: 60 -AGLMQSDNVQGAKEVFDGME-----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
AGL+ G ++ GM V DV N++I+ Y GL++EA++VF MP ++
Sbjct: 111 CAGLLD----LGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERN 166
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM------GARDVASWTIMV----------NGLVR 157
+VSWN +I + + + F+EM DVA+ ++ G+
Sbjct: 167 LVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAV 226
Query: 158 EGRIV-------------------------EARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
G V EA+ LFDK K++ +WN MI GY V
Sbjct: 227 HGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDV 286
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
L QKM D ++ + +P E++ +
Sbjct: 287 CRTFYLLQKMQTED-------------AKMKADEFTILNVLPVCLERSELQSL------- 326
Query: 253 LVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
KE H Y ++ SN I Y G + S+ +VF+LM T+ V+ WN ++ G
Sbjct: 327 --KELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYA 384
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQF 369
+N + L ++QM +SG PD T S+L CS + +L G +IH A++ +A + F
Sbjct: 385 QNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPF 444
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
+S ++++Y CG +A + F + ++SWN +I G + +G ++A+ LF +M
Sbjct: 445 IGIS--LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS 502
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+P +I + V ACS + G+ C K L + ++D+ + G I
Sbjct: 503 DGIQPYEIAIMCVCGACSQLSALRLGK-ELHCFALKAHLTEDIFVSSSIIDMYAKGGCIG 561
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYLIL 547
+ + + +R E W ++ IH K E+++ L+P++
Sbjct: 562 LSQRIFDRLR----EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDD----FTF 613
Query: 548 TEMYLSC---GRREDAKRIFAQM 567
T + ++C G ED F QM
Sbjct: 614 TGILMACSHAGLVEDGLEYFNQM 636
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGP 331
T +I Y G + VF+ + +++ WN ++ N+L E+ + F ++ +
Sbjct: 38 TRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEH 97
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
PDN T V+ C+ L L LG+ IH A K+ V NA+I MY +CG ++ A+
Sbjct: 98 KPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVK 157
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD--FKPDDITFVGVLSACSYA 449
F +P +++SWNSIICG + +G+ +++ F M + + F PD T V VL C+
Sbjct: 158 VFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGE 217
Query: 450 GLVDQG 455
+++G
Sbjct: 218 EDIEKG 223
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFT---TVSNAMITMYARCGNIQSALLEFSSVP 397
+L C +++GR++H A QF ++ +ITMY+ CG+ + + F +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVS--ASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR 61
Query: 398 IHDIISWNSIICGLAYHGYAEKALELF-ERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
++ WN+I+ + E A+ +F E + +T+ KPD+ T V+ AC AGL+D G
Sbjct: 62 RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLGL 119
Query: 457 -YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
M K L ++ + G+ GL++EA+ + +
Sbjct: 120 GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHM 162
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 276/483 (57%), Gaps = 19/483 (3%)
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
L+NC ++ + + +M + T + +++GR + A + D+ N ++
Sbjct: 95 LINCGSLEPERTLYSKM----LNKCTYLRK--LKQGRAIHAH-IQSSTFEDDLVLLNFIL 147
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS 243
Y G + A+DLF KM +D+ SW LI+G S + A++ F +M +
Sbjct: 148 NMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEF 207
Query: 244 IISVLIRNGLV-------KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELM 295
+S L++ ++ H++ KY Y N+ ++++ Y + A +F +
Sbjct: 208 TLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL 267
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
++V WN +I G GE ++ F+QM G P + T++SV T C+ +L+ G+
Sbjct: 268 AAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGK 327
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+HA IK + N +I MYA+ G+I+ A F + DI+SWNSII G A HG
Sbjct: 328 WVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHG 387
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
+AL+LFE+M +P++ITF+ VL+ACS++GL+D+G+YYF+ MK K+ ++ + AH+
Sbjct: 388 LGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHH 446
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
VVDLLGR G ++EA + E+ I+ + VWGALLG+CR+H N+ +G A E++ E
Sbjct: 447 VTVVDLLGRAGRLNEANKFIEEM---PIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFE 503
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
L+P++SG +++L+ +Y S GR DA ++ MKE+GVKKEP CSW++I + HVF++ D
Sbjct: 504 LDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDD 563
Query: 596 SHP 598
SHP
Sbjct: 564 SHP 566
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 169/380 (44%), Gaps = 42/380 (11%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
E D+ N ++ + +++ A+++FD M +D+V+W +ISGY +G EAL +F
Sbjct: 137 EDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPK 196
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA--------RDVASWTIMVNGLVREGR 160
M + +L+ ++ + +++ A +V + +++ R
Sbjct: 197 MLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAH 256
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ EA+ +F+ + AK+V +WN +IAG+ G LF +M
Sbjct: 257 MREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQM------------------ 298
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIV 277
+Q E T++S+ + +G +++ H+++ K IA N ++
Sbjct: 299 ---------LRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLI 349
Query: 278 G-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A KVF + +D+ WN +I G ++ LG E L+ F QM ++ P+
Sbjct: 350 DMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEI 409
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-AMITMYARCGNIQSALLEFSS 395
TF SVLT CS LD G Q + + +K + + + ++ + R G + A
Sbjct: 410 TFLSVLTACSHSGLLDEG-QYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEE 468
Query: 396 VPIHDIIS-WNSIICGLAYH 414
+PI + W +++ H
Sbjct: 469 MPIKPTAAVWGALLGSCRMH 488
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 167/349 (47%), Gaps = 60/349 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVI-- 59
++EAQ+LFDKMP +D V+W V+I GY ++G A+ LF +M + + FT ++++
Sbjct: 156 LEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA 215
Query: 60 AGLMQSD---------------------------------NVQGAKEVFDGMEVRDVVTW 86
+G SD +++ AK +F+ + ++VV+W
Sbjct: 216 SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSW 275
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAE---SYFKE 139
N++I+G+ G + +R+F M + +++ V A + ++ + ++ +
Sbjct: 276 NALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIK 335
Query: 140 MGARDVAS-WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
G + +A +++ + G I +A+K+F ++ +D+ +WN +I+GY +G A L
Sbjct: 336 SGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQL 395
Query: 199 FQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIR 250
F++M + ++ ++ +S +D YF+ M E +++ +L R
Sbjct: 396 FEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGR 455
Query: 251 NGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE-----VGSAIKVFEL 294
G + EA+ ++E+ P A+ ++G M + V +A ++FEL
Sbjct: 456 AGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFEL 504
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 153/357 (42%), Gaps = 66/357 (18%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTY-- 55
R A ++EA+ +F+ + ++ V+WN +I G+ + G ++ M LF QM E FTY
Sbjct: 253 RWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSS 312
Query: 56 ---------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRD 82
NT+I +S +++ AK+VF + +D
Sbjct: 313 VFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQD 372
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNCQR---MDLAESYF 137
+V+WNS+ISGY +GL EAL++F M LK V N + + L C +D + YF
Sbjct: 373 IVSWNSIISGYAQHGLGAEALQLFEQM-LKAKVQPNEITFLSVLTACSHSGLLDEGQYYF 431
Query: 138 KEMGAR----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA-WNLMIAGY-----L 187
+ M VA +V+ L R GR+ EA K ++MP K A W ++ +
Sbjct: 432 ELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNM 491
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
D G V AE +F+ + D L N ++ R+ A K M E+ K + V
Sbjct: 492 DLG-VYAAEQIFE-LDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWV 549
Query: 248 LIRNGLVKEAHSYL---EKYPYSNIAS--WTNVIVGYFEMGEVGSAIKVFELMTTRD 299
I N E H ++ + +P W + E+G V V M +D
Sbjct: 550 EIEN----EVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQD 602
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 136/345 (39%), Gaps = 58/345 (16%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D V N ++ Y K G L+ A LF++MP +DM ++ +I+G QS A +F M
Sbjct: 139 DLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKML 198
Query: 80 ----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA-----LVNCQRM 130
+ T +S++ G D R H LK N+ +G+ M
Sbjct: 199 HLGFQPNEFTLSSLLKA-SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHM 257
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA------------ 178
A+ F + A++V SW ++ G R+G +LF +M + +
Sbjct: 258 REAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTAC 317
Query: 179 ----------W-----------------NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
W N +I Y +G + A+ +F+++ +D+ SW
Sbjct: 318 ASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWN 377
Query: 212 QLINGLVNSRRIDAAISYFKQM----PETCEKTWNSIISVLIRNGLVKEAHSYLE---KY 264
+I+G A+ F+QM + E T+ S+++ +GL+ E Y E K+
Sbjct: 378 SIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKH 437
Query: 265 PY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV-TVWNVMI 307
+ +A V+ G + A K E M + VW ++
Sbjct: 438 KIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALL 482
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 178/532 (33%), Positives = 276/532 (51%), Gaps = 33/532 (6%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQR 129
A+ +FD ++ R ++ WN++I YV N + + +FH + + + + N + ++ C R
Sbjct: 66 ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHEL-VHEYLPDNFTLPCVIKGCAR 124
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
+ G+V+EG+ + L DV ++ Y
Sbjct: 125 L-----------------------GVVQEGKQIHGLALKIGF-GSDVFVQGSLVNMYSKC 160
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI 249
G + A +F M D+D+ W LI+G ID A+ F++MPE +W ++ L
Sbjct: 161 GEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLS 220
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
+ G V+ A ++ P N+ SW +I GY + G+ SA+++F M D+ WN+MI G
Sbjct: 221 KCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAG 280
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
N + +K F M + G P +AT SVL+ S L L GR IH+ K
Sbjct: 281 YELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELD 340
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
+ ++I MYA+CG I+SAL F ++ + W +II GL HG A AL LF M
Sbjct: 341 GILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCK 400
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
T KP+ I F+GVL+AC++AGLVD GR YFD M N+Y ++P HY C+VD+L R G ++
Sbjct: 401 TGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLE 460
Query: 490 EAMNLLNEIRADGIEVSP--TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLIL 547
EA N + + + +SP +W +LLG R H I +GE A +RV+E+ P G Y++L
Sbjct: 461 EAKNTI-----ENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILL 515
Query: 548 TEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
+ MY + G E + M + G +K+PGCS ++ H F+ GD SHP+
Sbjct: 516 SNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQ 567
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 236/455 (51%), Gaps = 23/455 (5%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER---DMFTYNTVIAGLMQS 65
A+++FD++ +R + WN +I+ Y +N F + + LF+++ D FT VI G +
Sbjct: 66 ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLPDNFTLPCVIKGCARL 125
Query: 66 DNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
VQ K++ G+ ++ DV S+++ Y G ID A +VF GM KDVV WN +
Sbjct: 126 GVVQEGKQI-HGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSL 184
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I C +D+A F+EM RD SWT++V+GL + G++ ARKLFD+MP +++ +WN
Sbjct: 185 IDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWN 244
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL-VNSRRIDAAISYFKQMPETCEK 239
MI GY+ +G A +LF +M DL +W +I G +N + +DA +F +
Sbjct: 245 AMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRP 304
Query: 240 TWNSIISVLIR-NGLV-----KEAHSYLEK--YPYSNIASWTNVIVGYFEMGEVGSAIKV 291
+ +++SVL +GL + HSY+EK + I T++I Y + G + SA+ V
Sbjct: 305 SHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILG-TSLIEMYAKCGCIESALTV 363
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F + + V W +I GLG + + L F++M ++G P+ F VL C+ +
Sbjct: 364 FRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLV 423
Query: 352 DLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIIC 409
D GRQ + + + T ++ + R G+++ A ++PI + + W S++
Sbjct: 424 DDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLG 483
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
G HG + + + R+ + P+ I +LS
Sbjct: 484 GSRNHGKID--IGEYAAQRVIEVAPETIGCYILLS 516
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 145/303 (47%), Gaps = 20/303 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R I A LF++MP+RD +W V++ G K G +++A LF+QMP R++ ++N +I G
Sbjct: 190 RCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMING 249
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK--------D 113
M+S + A E+F M + D+VTWN MI+GY NG +A+++F M LK
Sbjct: 250 YMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFF-MMLKLGSRPSHAT 308
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMP 172
+VS + L + SY ++ G D T ++ + G I A +F +
Sbjct: 309 LVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQ 368
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR----IDAAIS 228
K V W +I G +G A LF +M L + G++N+ +D
Sbjct: 369 KKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQ 428
Query: 229 YFKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEM 282
YF M E + + ++ +L R G ++EA + +E P S N W +++ G
Sbjct: 429 YFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNH 488
Query: 283 GEV 285
G++
Sbjct: 489 GKI 491
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 90/182 (49%), Gaps = 5/182 (2%)
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
++ ++G A +F+ + R + WN +I EN +G+ F ++ PDN T
Sbjct: 59 KINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHE-YLPDNFTLPC 117
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
V+ C+ L + G+QIH A+KI V +++ MY++CG I A F + D
Sbjct: 118 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKD 177
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
++ WNS+I G A G + AL+LFE M + D ++ ++ S G V+ R FD
Sbjct: 178 VVLWNSLIDGYARCGEIDIALQLFEEMP----ERDAFSWTVLVDGLSKCGKVESARKLFD 233
Query: 461 CM 462
M
Sbjct: 234 QM 235
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 191/615 (31%), Positives = 317/615 (51%), Gaps = 64/615 (10%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
+T N +I Y K G + NA LF+ D + N +++G +++ + A+++FD M
Sbjct: 87 NTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMP 146
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGM----------PLKDVVSWNLVIGALVNCQR 129
+ V++ +MI G+V NG EAL VF M L +V+S +G ++NC+
Sbjct: 147 NKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRM 206
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
+ +G V+ T +++ + EAR+LFD+MP +++ WN+M+ GY
Sbjct: 207 VHGLVVKMFVVGLVIVS--TNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKT 264
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET------------- 236
G V A +LF + D+D+ SW +I+G + R+ A+ ++ M +T
Sbjct: 265 GLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLV 324
Query: 237 --CEK--------------------TWNSIISVLI----RNGLVKEAHSYLEKYPYSNIA 270
C + +N I + +I G++ A E ++
Sbjct: 325 SACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLE 384
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
SW + G+ + G + A+K F+ M RDV W+ MI G +++ + L+ F +M G
Sbjct: 385 SWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGG 444
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIH----AQAIKIARNQFTTVSNAMITMYARCGNI 386
P+ T SV + + L TL G+ H +++I N + A+I MYA+CG+I
Sbjct: 445 IKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDN----LRAALIDMYAKCGSI 500
Query: 387 QSALLEFSSV--PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
SAL F+ + + + WN+IICGLA HG+A LE+F M+ KP+ ITF+GVLS
Sbjct: 501 NSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLS 560
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
AC +AGLV+ G+ F MK+ Y ++P HY C++D+LGR GL++EA + IR+ +E
Sbjct: 561 ACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEM---IRSMPME 617
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+WG LL ACR H N+ +GE A E + L P++ G ++L+ +Y + G+ E+ +
Sbjct: 618 ADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVR 677
Query: 565 AQMKENGVKKEPGCS 579
+ M+ + +EPG S
Sbjct: 678 SVMQGQTMDREPGYS 692
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 226/524 (43%), Gaps = 101/524 (19%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----------- 49
+RN +I A+ LFD MP + V++ MI G+ +NGF A+ +F M
Sbjct: 130 VRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLV 189
Query: 50 ----------------------RDMFTYNTVIAG--LMQS----DNVQGAKEVFDGMEVR 81
MF VI LM + V+ A+ +FD M R
Sbjct: 190 NVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPER 249
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
++VTWN M++GY GL+DEA +F G+ KDV+SW +I + R+ A ++ M
Sbjct: 250 NLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAML 309
Query: 141 ----GARDV---------ASWTIMVNGLVREGRIVEARKLFD------------------ 169
G +V T +V+G G +V ++ FD
Sbjct: 310 QTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVV--KRGFDCYNFIQTTIIYFYAACGM 367
Query: 170 --------KMPAKD-VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
++ KD +++WN + AG++ NG + A F KMH RD+ SW +I+G S
Sbjct: 368 MDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQS 427
Query: 221 RRIDAAISYFKQM----PETCEKTWNSIISVLIRNGLVKE---AHSYL--EKYPYSNIAS 271
A+ F +M + E T S+ S + G ++E AH Y+ E P+ N
Sbjct: 428 EHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPF-NDNL 486
Query: 272 WTNVIVGYFEMGEVGSAIKVFELM--TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
+I Y + G + SA++ F + V+ WN +I GL + L+ F M+
Sbjct: 487 RAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRF 546
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQ 387
P+ TF VL+ C ++ G++I + +K A N + + MI + R G ++
Sbjct: 547 HIKPNPITFIGVLSACCHAGLVESGKRIF-KTMKSAYNVEPDIKHYGCMIDILGRAGLLE 605
Query: 388 SALLEFSSVPIH-DIISWNSIICGLAYHG---YAEKALELFERM 427
A S+P+ DI+ W +++ HG E+A E R+
Sbjct: 606 EAEEMIRSMPMEADIVIWGTLLAACRTHGNVNIGERAAENLARL 649
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 31/147 (21%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS- 395
S L CS L + GRQIH+ K+ + T + N++I MYA+CG+I++A L F
Sbjct: 55 ALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGF 114
Query: 396 ------------------------------VPIHDIISWNSIICGLAYHGYAEKALELFE 425
+P +S+ ++I G +G+ +ALE+F+
Sbjct: 115 ATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFK 174
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLV 452
MR P+D+T V V+SACS+ G V
Sbjct: 175 DMRSCGVVPNDLTLVNVISACSHLGEV 201
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 201/666 (30%), Positives = 329/666 (49%), Gaps = 83/666 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------------- 47
+R + EA +F KM +RD +WNV++ GY K G+ D A+ L+++M
Sbjct: 140 VRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFP 199
Query: 48 ---------P-----------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
P E D+ N +I ++ ++ A+ VFD M R
Sbjct: 200 CVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRR 259
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESYF 137
D ++WN+MISGY N + E LR+F M D+++ VI A E+
Sbjct: 260 DRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISA---------CEALG 310
Query: 138 KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
E R+V + I G V E V N +I + GC AE
Sbjct: 311 DERLGREVHGYVIK-TGFVAE-----------------VSVNNSLIQMHSSVGCWDEAEM 352
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGL 253
+F KM +DL SW +I+G + + A+ + M E T S++S GL
Sbjct: 353 VFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGL 412
Query: 254 VKEA---HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
+ + H + ++ ++ N ++ Y + + A++VF + ++V W +I G
Sbjct: 413 LDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILG 472
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
L N E L FF QM S P++ T SVL+ C+ + L G++IHA A++
Sbjct: 473 LRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFD 531
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
+ NA++ MY RCG ++ A +F+S D+ SWN ++ G A G A+ELF +M
Sbjct: 532 GFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIE 590
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+D PD+ITF +L ACS +G+V G YF+ M++K+ + P HY VVDLLGR G ++
Sbjct: 591 SDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLE 650
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
+A + ++ I+ P +WGALL ACRI+ N+++GE+A + + E++ + G Y++L
Sbjct: 651 DAYEFIKKM---PIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCN 707
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNL 609
+Y G+ ++ R+ M+EN + +PGCSW+++ H FL+GD HP+ + +L
Sbjct: 708 LYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEG 767
Query: 610 LHTEIE 615
+ ++E
Sbjct: 768 FYEKME 773
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 193/414 (46%), Gaps = 42/414 (10%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL---- 111
N +++ ++ ++ A VF M RD+ +WN ++ GY G DEAL ++H M
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIR 192
Query: 112 KDVVSWNLVI---GALVNCQRMDLAESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKL 167
DV ++ V+ G L + R + G DV ++ V+ G I AR +
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLV 252
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRI 223
FD+MP +D +WN MI+GY +N LF M D DL + +I+
Sbjct: 253 FDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISA------- 305
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEM 282
CE L L +E H Y+ K + S N ++ + +
Sbjct: 306 -------------CE--------ALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSV 344
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G A VF M +D+ W MI G +N L E+ ++ + M+ G PD T SVL
Sbjct: 345 GCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVL 404
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
+ C+ L LD G +H A + + V+N++I MY++C I AL F +P ++I
Sbjct: 405 SACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVI 464
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
SW SII GL + + +AL F++M L+ KP+ +T V VLSAC+ G + G+
Sbjct: 465 SWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGK 517
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 198/409 (48%), Gaps = 18/409 (4%)
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
V+ N +++ ++ G + A +F KM +RDL SW L+ G + D A++ + +M
Sbjct: 129 VRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLW 188
Query: 236 TCEKTWNSIISVLIRN--GLV-----KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGS 287
+ ++R GL +E H ++ +Y + + N ++ Y + G++ S
Sbjct: 189 VGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFS 248
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A VF+ M RD WN MI G END+ EGL+ F M+E PD T TSV++ C
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEA 308
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
L LGR++H IK +V+N++I M++ G A + FS + D++SW ++
Sbjct: 309 LGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAM 368
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
I G +G EKA+E + M PD+IT VLSAC+ GL+D+G + ++
Sbjct: 369 ISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHE-FADRTG 427
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI-HNNIKVG 526
L ++D+ + ID+A+ + + I + W +++ R+ + + +
Sbjct: 428 LTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNV----ISWTSIILGLRLNYRSFEAL 483
Query: 527 EIAGERVMELEPNNSGVYLILTEM----YLSCGRREDAKRIFAQMKENG 571
+ ++ L+PN+ + +L+ LSCG+ A + + +G
Sbjct: 484 FFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDG 532
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
E+ L M+E S + T+ ++L +C G ++H+ K + NA+
Sbjct: 76 EKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNAL 135
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
++M+ R G++ A F + D+ SWN ++ G A GY ++AL L+ RM +PD
Sbjct: 136 LSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDV 195
Query: 437 ITFVGVLSACSYAGLVDQGR 456
TF VL C GL D R
Sbjct: 196 YTFPCVLRTC--GGLPDLAR 213
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 196/643 (30%), Positives = 336/643 (52%), Gaps = 38/643 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
++ A +LF+ M Q DT WNVMIRG+ NG +A+ +++M D FTY VI
Sbjct: 76 MKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKA 135
Query: 62 ------LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
L + + V G K + G+++ D+ NS+I Y G I+ A VF MP++D+V
Sbjct: 136 CGGLYDLAEGERVHG-KVIKSGLDL-DIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLV 193
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVA--SWTIM-------VNGLVREGRIVEARK 166
SWN +I V+ + S F+EM A + ++++ + G +R G+ + +
Sbjct: 194 SWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQM 253
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ ++ DV ++ Y G + AE LF ++ D+ + +W +I G + + +
Sbjct: 254 MRSRLEL-DVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFES 312
Query: 227 ISYFKQMPE--TCEKTWNSIISVLIRNG------LVKEAHSYLEKYPY-SNIASWTNVIV 277
+Y ++M E W ++I++L L K H + + + ++ T ++
Sbjct: 313 FAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVD 372
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y E G++ A +F M R++ WN MI +N + + F + PD T
Sbjct: 373 MYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATT 432
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
S+L ++L +L QIH K+ + T VSN+++ MY +CGN+ A F +
Sbjct: 433 IASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMT 492
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
D+ISWN++I A HG+ ++ELF MR F+P+ TFV +L +CS AGLV++G
Sbjct: 493 FKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWE 552
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLG 515
YF+ MK Y + P HY C++DL+GR G +D A N + E + ++PT +WG+LL
Sbjct: 553 YFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEE-----MPLAPTARIWGSLLT 607
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
A R ++++ EIA E ++ LE +N+G Y++L+ MY GR ED +RI MK+ G++K
Sbjct: 608 ASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKS 667
Query: 576 PGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREI 618
GCS + ++ F++ D S + + + +L+++ +I ++
Sbjct: 668 VGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDV 710
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 147/299 (49%), Gaps = 9/299 (3%)
Query: 219 NSRRI-DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
NS+R +A+ + P+T T + + + K S+L + N S T +
Sbjct: 12 NSKRPRNASREKRARTPQTNPDTDLILKPRIFKTARSKRNQSFLVE---RNSVSLTRALS 68
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y E G + +A+ +FE M D +WNVMI G +N L + + F+ +M+ G DN T
Sbjct: 69 SYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFT 128
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+ V+ C L L G ++H + IK + + N++I MYA+ G I+SA + F +P
Sbjct: 129 YPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMP 188
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ D++SWNS+I G G ++L F M+ + K D + +G+L ACS G + G+
Sbjct: 189 VRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGK- 247
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
C + L+ T +VD+ + G +D A L ++I + S W A++G
Sbjct: 248 EIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQI----TDKSIVAWNAMIGG 302
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 154/385 (40%), Gaps = 49/385 (12%)
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
R+ S T ++ V G + A LF+ M D WN+MI G++DNG A D + +M
Sbjct: 58 RNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRM 117
Query: 203 H----DRDLTSWKQLING------LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
D ++ +I L R+ + K + NS+I + + G
Sbjct: 118 EFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKV--IKSGLDLDIYIGNSLIIMYAKIG 175
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
++ A + P ++ SW ++I GY +G+
Sbjct: 176 CIESAEMVFREMPVRDLVSWNSMISGYVSVGD---------------------------- 207
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
G L F +M+ SG D + +L CS L G++IH Q ++ V
Sbjct: 208 ---GWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMV 264
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL-TD 431
+++ MYA+CG + A F + I++WN++I G + + + ++ +M+
Sbjct: 265 QTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGK 324
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
PD IT + +L C+ + G+ FL P T +VD+ G G + A
Sbjct: 325 LHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFL-PHLVLETALVDMYGECGKLKPA 383
Query: 492 MNLLNEIRADGIEVSPTVWGALLGA 516
L ++ E + W A++ +
Sbjct: 384 ECLFGQMN----ERNLISWNAMIAS 404
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 142/340 (41%), Gaps = 58/340 (17%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-------------- 49
R+ A+ LFD++ + V WN MI GY N + +M E
Sbjct: 276 GRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINL 335
Query: 50 ---------------------RDMFTYNTVIAGLM-----QSDNVQGAKEVFDGMEVRDV 83
R+ F + V+ + + ++ A+ +F M R++
Sbjct: 336 LPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNL 395
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFKE 139
++WN+MI+ Y NG +A+ +F + K D + ++ A + AE
Sbjct: 396 ISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGY 455
Query: 140 MGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
+ + S T + N +V + G ++ AR++FD+M KDV +WN +I Y +G ++
Sbjct: 456 VTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRIS 515
Query: 196 EDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMPETCE-----KTWNSIIS 246
+LF +M ++ +++ L+ + ++ YF M + + I+
Sbjct: 516 IELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILD 575
Query: 247 VLIRNGLVKEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEV 285
++ R G + A +++E+ P + A W +++ G+V
Sbjct: 576 LIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDV 615
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 51/243 (20%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+++ A+ LF +M +R+ ++WN MI Y KNG AM LF + + + T IA ++
Sbjct: 378 GKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASIL 437
Query: 64 ----------QSDNVQG-----------------------------AKEVFDGMEVRDVV 84
+++ + G A+E+FD M +DV+
Sbjct: 438 PAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVI 497
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMDLAE---SYFKEM 140
+WN++I Y +G ++ +F M K + + + L++C L YF M
Sbjct: 498 SWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSM 557
Query: 141 GARD------VASWTIMVNGLVREGRIVEARKLFDKMP-AKDVQAWNLMIAGYLDNGCVG 193
RD + + +++ + R G + A+ ++MP A + W ++ + G V
Sbjct: 558 -KRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVE 616
Query: 194 VAE 196
+AE
Sbjct: 617 LAE 619
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 183/578 (31%), Positives = 311/578 (53%), Gaps = 48/578 (8%)
Query: 37 LDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN 96
LD A +F+Q+P +++T+NT+I S VF M NS +V
Sbjct: 80 LDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIK 139
Query: 97 GLIDE----ALRVFHGMPLKDVVSWNLVIG-ALVNCQRMDLAESYFKEMGARDVASWTIM 151
+ A + HGM +K +L I +L++ ++ +G D
Sbjct: 140 AATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIH---------FYSSLGDLD------- 183
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
A +F K+ KD+ +WN MI+G++ G A LF++M + +
Sbjct: 184 -----------SAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNR 232
Query: 212 QLINGLVNS--RRIDAAISYFKQMPETCEKTW--------NSIISVLIRNGLVKEAHSYL 261
+ G++++ +RID + + + + E+ N+++ + ++ G +++A
Sbjct: 233 VTMVGVLSACAKRID--LEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLF 290
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
+K +I SWT +I GY ++G+ +A +VF++M D+T WN +I +N +E L
Sbjct: 291 DKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALA 350
Query: 322 FFVQMK-ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F +++ P+ T S L C+ L +DLG IH K ++ ++I MY
Sbjct: 351 IFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMY 410
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
++CG+++ AL F SV D+ W+++I GLA HG+ A++LF +M+ T KP+ +TF
Sbjct: 411 SKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFT 470
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
+L ACS++GLVD+GR +F+ M+ Y + P S HY C+VD+LGR G ++EA+ L+ ++
Sbjct: 471 NLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKM-- 528
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
I S +VWGALLGACRI+ N+++ E+A R++E + NN G Y++L+ +Y G+ +
Sbjct: 529 -PIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCV 587
Query: 561 KRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
R+ MK +G++KEPGCS I++N H FL GD+SHP
Sbjct: 588 SRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHP 625
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 217/486 (44%), Gaps = 67/486 (13%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------------------ 50
A +FD++P+ + TWN +IR + + + +F QM
Sbjct: 83 ACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAAT 142
Query: 51 ----------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
D+F N++I ++ A VF + +D+V+WNS
Sbjct: 143 EVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNS 202
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNC-QRMDL-----AESYFKEMG 141
MISG+V G +EAL++F M +++ + ++G L C +R+DL A Y + G
Sbjct: 203 MISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNG 262
Query: 142 AR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
++ M++ V+ G + +AR+LFDKM KD+ +W MI GY G A +F
Sbjct: 263 IDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFD 322
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-----PETCEKTWNSIISVLIRNGLVK 255
M D+T+W LI+ + + A++ F+++ + E T S ++ + G +
Sbjct: 323 VMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMD 382
Query: 256 EA---HSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
H Y++K N T++I Y + G + A++VF + RDV VW+ MI GL
Sbjct: 383 LGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLA 442
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+ G + F +M+E+ P+ TFT++L CS +D GR Q R +
Sbjct: 443 MHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQ----MRPVYGV 498
Query: 372 VSNA-----MITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELFE 425
V + M+ + R G ++ A+ +PI S W +++ +G E A
Sbjct: 499 VPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACS 558
Query: 426 RMRLTD 431
R+ TD
Sbjct: 559 RLLETD 564
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 201/666 (30%), Positives = 329/666 (49%), Gaps = 83/666 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------------- 47
+R + EA +F KM +RD +WNV++ GY K G+ D A+ L+++M
Sbjct: 140 VRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFP 199
Query: 48 ---------P-----------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
P E D+ N +I ++ ++ A+ VFD M R
Sbjct: 200 CVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRR 259
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESYF 137
D ++WN+MISGY N + E LR+F M D+++ VI A E+
Sbjct: 260 DRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISA---------CEALG 310
Query: 138 KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
E R+V + I G V E V N +I + GC AE
Sbjct: 311 DERLGREVHGYVIK-TGFVAE-----------------VSVNNSLIQMHSSVGCWDEAEM 352
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGL 253
+F KM +DL SW +I+G + + A+ + M E T S++S GL
Sbjct: 353 VFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGL 412
Query: 254 VKEA---HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
+ + H + ++ ++ N ++ Y + + A++VF + ++V W +I G
Sbjct: 413 LDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILG 472
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
L N E L FF QM S P++ T SVL+ C+ + L G++IHA A++
Sbjct: 473 LRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFD 531
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
+ NA++ MY RCG ++ A +F+S D+ SWN ++ G A G A+ELF +M
Sbjct: 532 GFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIE 590
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+D PD+ITF +L ACS +G+V G YF+ M++K+ + P HY VVDLLGR G ++
Sbjct: 591 SDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLE 650
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
+A + ++ I+ P +WGALL ACRI+ N+++GE+A + + E++ + G Y++L
Sbjct: 651 DAYEFIKKM---PIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCN 707
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNL 609
+Y G+ ++ R+ M+EN + +PGCSW+++ H FL+GD HP+ + +L
Sbjct: 708 LYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEG 767
Query: 610 LHTEIE 615
+ ++E
Sbjct: 768 FYEKME 773
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 193/414 (46%), Gaps = 42/414 (10%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL---- 111
N +++ ++ ++ A VF M RD+ +WN ++ GY G DEAL ++H M
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIR 192
Query: 112 KDVVSWNLVI---GALVNCQRMDLAESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKL 167
DV ++ V+ G L + R + G DV ++ V+ G I AR +
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLV 252
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRI 223
FD+MP +D +WN MI+GY +N LF M D DL + +I+
Sbjct: 253 FDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISA------- 305
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEM 282
CE L L +E H Y+ K + S N ++ + +
Sbjct: 306 -------------CE--------ALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSV 344
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G A VF M +D+ W MI G +N L E+ ++ + M+ G PD T SVL
Sbjct: 345 GCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVL 404
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
+ C+ L LD G +H A + + V+N++I MY++C I AL F +P ++I
Sbjct: 405 SACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVI 464
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
SW SII GL + + +AL F++M L+ KP+ +T V VLSAC+ G + G+
Sbjct: 465 SWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGK 517
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 195/401 (48%), Gaps = 18/401 (4%)
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
V+ N +++ ++ G + A +F KM +RDL SW L+ G + D A++ + +M
Sbjct: 129 VRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLW 188
Query: 236 TCEKTWNSIISVLIRN--GLV-----KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGS 287
+ ++R GL +E H ++ +Y + + N ++ Y + G++ S
Sbjct: 189 VGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFS 248
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A VF+ M RD WN MI G END+ EGL+ F M+E PD T TSV++ C
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEA 308
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
L LGR++H IK +V+N++I M++ G A + FS + D++SW ++
Sbjct: 309 LGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAM 368
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
I G +G EKA+E + M PD+IT VLSAC+ GL+D+G + ++
Sbjct: 369 ISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHE-FADRTG 427
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI-HNNIKVG 526
L ++D+ + ID+A+ + + I + W +++ R+ + + +
Sbjct: 428 LTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNV----ISWTSIILGLRLNYRSFEAL 483
Query: 527 EIAGERVMELEPNNSGVYLILTEM----YLSCGRREDAKRI 563
+ ++ L+PN+ + +L+ LSCG+ A +
Sbjct: 484 FFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHAL 524
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
E+ L M+E S + T+ ++L +C G ++H+ K + NA+
Sbjct: 76 EKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNAL 135
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
++M+ R G++ A F + D+ SWN ++ G A GY ++AL L+ RM +PD
Sbjct: 136 LSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDV 195
Query: 437 ITFVGVLSACSYAGLVDQGR 456
TF VL C GL D R
Sbjct: 196 YTFPCVLRTC--GGLPDLAR 213
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 190/653 (29%), Positives = 328/653 (50%), Gaps = 58/653 (8%)
Query: 18 QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDN-VQGAKEVFD 76
+ D VT + ++ Y K LD+A +F +MPER++ ++ VIAG +Q+D ++G K D
Sbjct: 170 ENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKD 229
Query: 77 GMEVRDVVTWNSMISGY-VCNGLIDEALRV-FHGMPLKDVVSWNLVIGA-----LVNCQR 129
++V V+ ++ S + C GL L HG LK +++ +IG C+R
Sbjct: 230 MLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCER 289
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD- 188
M A F + S+ ++ G R+ + ++A +F + ++ + ++G L
Sbjct: 290 MFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTA 349
Query: 189 ------------------------NGCVG--------------VAEDLFQKMHDRDLTSW 210
N CV A +F++M RD SW
Sbjct: 350 CSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSW 409
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
+I + I +S F M + + + +++ ++A +Y + I
Sbjct: 410 NAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIK 469
Query: 271 S-----W---TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
S W + ++ Y + G + A K+ + + WN +I G E ++
Sbjct: 470 SGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRY 529
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F QM E G PDN T+ +VL +C+++ T++LG+QIHAQ +K+ + +++ ++ MY++
Sbjct: 530 FSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSK 589
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CGN+Q + L F P D ++W+++IC AYHG EKA+ LFE M+L + KP+ F+ V
Sbjct: 590 CGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISV 649
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
L AC++ G VD+G +YF M + Y L P+ HY+C+VDLLGR G ++EA+ L+ +
Sbjct: 650 LRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMP--- 706
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
E +W LL C++ N++V E A +++L+P +S Y++L +Y G + +
Sbjct: 707 FEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAK 766
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+ + MK +KKEPGCSWI++ D H FL GD +HP+ + +LL E++
Sbjct: 767 MRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMK 819
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 144/604 (23%), Positives = 260/604 (43%), Gaps = 91/604 (15%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+++++ A +FD+MPQRD ++WN +I GY G + A LF+ MPERD+ ++N++++
Sbjct: 53 KSSKMNYAFKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSC 112
Query: 62 LMQSDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNGLIDEALRV-FHGMPLK---- 112
+ + + + E+F M D T+ ++ C+G+ D L + H + ++
Sbjct: 113 YLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKA--CSGIEDYGLGLQVHCLAIQMGFE 170
Query: 113 -DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
DVV+ + ++ C+++D A F+EM R++ W+ ++ G V+ R +E KLF M
Sbjct: 171 NDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDM 230
Query: 172 PAKDVQAWNLMIAGYLDNGCVGV-AEDLFQKMHDRDLTS--------WKQLINGLVNSRR 222
+ A C G+ A L ++H L S ++ R
Sbjct: 231 LKVGMGVSQSTYASVF-RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCER 289
Query: 223 IDAAISYFKQMPETCEKTWNSII----------------SVLIRNGL---------VKEA 257
+ A F +P +++N+II L RN L A
Sbjct: 290 MFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTA 349
Query: 258 HSYLEKYPYS--------------NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
S ++++ NI ++ Y + G + A +FE M RD W
Sbjct: 350 CSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSW 409
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
N +I +N+ + L FV M S PD+ T+ SV+ C+ L+ G +IH + IK
Sbjct: 410 NAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIK 469
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
V +A++ MY +CG + A + + +SWNSII G + +E A
Sbjct: 470 SGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRY 529
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-----------------------YYFD 460
F +M PD+ T+ VL C+ ++ G+ Y
Sbjct: 530 FSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSK 589
Query: 461 C--MKNKYFL---QPRSAHYT--CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
C M++ + P+ + T ++ GL ++A+NL E++ ++ + T++ ++
Sbjct: 590 CGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISV 649
Query: 514 LGAC 517
L AC
Sbjct: 650 LRAC 653
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 134/570 (23%), Positives = 242/570 (42%), Gaps = 63/570 (11%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
++ N ++ +S + A +VFD M RDV++WN++I GY G + A +F MP
Sbjct: 41 IYVANCLLQFYCKSSKMNYAFKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPE 100
Query: 112 KDVVSWNLVIGAL----VNCQRMDLAESYFKEMGARDVASWTIMV---NGLVREGRIVEA 164
+DVVSWN ++ VN + +++ D A++ +++ +G+ G ++
Sbjct: 101 RDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQV 160
Query: 165 RKLFDKMP-AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
L +M DV + ++ Y + A +F++M +R+L W +I G V + R
Sbjct: 161 HCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRF 220
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRN---------GLVKEAHSYLEKYPYSNIASWTN 274
+ FK M + S + + R+ G H+ + Y +I T
Sbjct: 221 IEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIG-TA 279
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+ Y + + A KVF + +N +I G D G + L F ++ + D
Sbjct: 280 TLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFD 339
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ + LT CS + G Q+H A+K V+N ++ MY +CG + A L F
Sbjct: 340 EISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFE 399
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA----- 449
+ D +SWN+II + K L LF M + +PDD T+ V+ AC+
Sbjct: 400 EMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNY 459
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL--------------- 494
G GR M +F+ + +VD+ G+ G++ EA +
Sbjct: 460 GTEIHGRIIKSGMGLDWFVG------SALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSI 513
Query: 495 ----------------LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
+++ GI + +L C I++G+ ++++L+
Sbjct: 514 ISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQL 573
Query: 539 NNSGVYL--ILTEMYLSCGRREDAKRIFAQ 566
+S VY+ L +MY CG +D++ +F +
Sbjct: 574 -HSDVYIASTLVDMYSKCGNMQDSRLMFEK 602
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 114/292 (39%), Gaps = 66/292 (22%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
TF+ +L CS+L L+ G+Q+H Q I V+N ++ Y + + A F +
Sbjct: 8 TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67
Query: 397 PIHDIISWNSIICGLA-------------------------------YHGYAEKALELFE 425
P D+ISWN++I G A ++G K++E+F
Sbjct: 68 PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQGR-YYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
RMR D TF +L ACS G+ D G C+ + + + +VD+ +
Sbjct: 128 RMRSLKIPHDYATFAVILKACS--GIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 485 FGLIDEA-------------------------------MNLLNEIRADGIEVSPTVWGAL 513
+D+A + L ++ G+ VS + + ++
Sbjct: 186 CKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 514 LGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+C + K+G ++ G + +S + +MY C R DA ++F
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVF 297
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/691 (27%), Positives = 332/691 (48%), Gaps = 101/691 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R + A++L +MP R+ V+WN +I ++G A+ ++ M + + N +A
Sbjct: 88 RAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLAS 147
Query: 62 LMQS---------------------------------------DNVQGAKEVFDGMEVRD 82
++ + +V A +FDGM +
Sbjct: 148 VLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPN 207
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNC--------QRM 130
V++ +M+ G G +D+ALR+F M D V+ + V+GA + +
Sbjct: 208 EVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAI 267
Query: 131 DLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
LA+S + + S + N LV + ++ EA K+F+ + + + +WN++I GY
Sbjct: 268 QLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGY 327
Query: 187 LDNGCVGVAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN 242
GC A ++ + M + ++ ++ + +R + +A + F ++P+ TWN
Sbjct: 328 GQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWN 387
Query: 243 SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVI---------VGYFEMG---------- 283
+++S + L +E + + N+ + +G FE+G
Sbjct: 388 TLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRL 447
Query: 284 --------------------EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
+VG A+ +F +MT RDV WN MI GL + L EE F
Sbjct: 448 LLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFL 507
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
QM+E+G P +++ S++ +C+ L ++ GRQ+HAQ +K +Q V ++I MYA+
Sbjct: 508 KQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKS 567
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
GN+ A L F+ + + ++++WN +I G A +G+ EKA+ELFE M T KPD +TF+ VL
Sbjct: 568 GNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVL 627
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
+ CS++GLVD+ +F+ M++ Y + P HYTC++D L R E ++ ++
Sbjct: 628 TGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMP---Y 684
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI 563
+ P +W LL AC +H+N ++GE + + + L+P N Y++L+ +Y + GR DA +
Sbjct: 685 KDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAV 744
Query: 564 FAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
A M GV K G SW+ DG F+ D
Sbjct: 745 RALMSSRGVVKGRGYSWVNHKDGSRAFMVAD 775
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/555 (23%), Positives = 259/555 (46%), Gaps = 65/555 (11%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
NA+ A+ L + DT N ++ Y +G +A+ F +P ++++YN I+
Sbjct: 28 NAKAAHARVLAAGLAA-DTFLLNRLVELYSLSGLPCHALRAFRALPHPNVYSYNAAISAA 86
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----------PLK 112
++ ++ A+++ M R+ V+WN++I+ +G EAL ++ GM L
Sbjct: 87 CRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLA 146
Query: 113 DVVSW-----------------------------NLVIGALVNCQRMDLAESYFKEMGAR 143
V+S N ++G C + A F M +
Sbjct: 147 SVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSP 206
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA---GYLDNGCVG-----VA 195
+ S+T M+ GL + G + +A +LF +M ++ + ++ G C G A
Sbjct: 207 NEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARA 266
Query: 196 EDLFQKMHD----RDLTSWKQLINGLVN----SRRIDAAISYFKQMPETCEKTWNSIISV 247
L Q +H + S + + N LV+ ++D AI F+ + +WN +I+
Sbjct: 267 IQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITG 326
Query: 248 LIRNGLVKEAHSYLEKYPYS----NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+ G + A LE S N +++N++ + +V SA +F+ + VT W
Sbjct: 327 YGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTW 386
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
N ++ G G+ +L +E + F +M+ PD T +L+ CS L +LG+Q+H+ +++
Sbjct: 387 NTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVR 446
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
+ + V++ +I +Y++CG + AL+ F+ + D++ WNS+I GLA H +E+A +
Sbjct: 447 LLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDF 506
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-YYFDCMKNKYFLQPRSAHYTC-VVDL 481
++MR P + ++ +++ C+ + QGR + +K+ Y ++ + C ++D+
Sbjct: 507 LKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGY---DQNVYVGCSLIDM 563
Query: 482 LGRFGLIDEAMNLLN 496
+ G +D+A N
Sbjct: 564 YAKSGNMDDARLFFN 578
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 297/549 (54%), Gaps = 25/549 (4%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
A VF ++ + ++WN+MI G+ + AL ++ M + + L
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 131 DLAESYFKEMGAR--------DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
A K++ A+ D+ T +++ + G + +A K+FD +DV ++ M
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PET 236
I GY G + A+ +F ++ +D+ SW +I+G R A+ F +M P+
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPD- 209
Query: 237 CEKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVF 292
E T +++S +G L ++ HS+++ + + + N ++ Y + GE+ A +F
Sbjct: 210 -ESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLF 268
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
E + +DV WN +I G + +E L F +M + G +P++ T S+L C+ L +D
Sbjct: 269 EGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAID 328
Query: 353 LGRQIHAQAIKIARNQFTTVS--NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
+GR IH K + T S ++I MYA+CGNI++A F ++ + S N++I G
Sbjct: 329 IGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFG 388
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
A HG A+ A +L RM+ +PDDITFVG+LSACS+AGL D GR F M Y ++P
Sbjct: 389 FAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEP 448
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
+ HY C++DLLGR GL EA L+N + +E +WG+LL AC+IH N+++GE+
Sbjct: 449 KLEHYGCMIDLLGRSGLFKEAEELINSMT---MEPDGVIWGSLLKACKIHKNLELGELIA 505
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVF 590
+++M++EP N G Y++L+ +Y + R +D R+ + + G+KK PGCS I+I+ H F
Sbjct: 506 QKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEF 565
Query: 591 LSGDSSHPK 599
L GD HP+
Sbjct: 566 LIGDKFHPQ 574
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 188/408 (46%), Gaps = 26/408 (6%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D+ + ++I+ Q+ V+ A +VFD RDVV++ +MI+GY G +D+A ++F +P
Sbjct: 112 DLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIP 171
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNGLVREGRIVEARK 166
+KDVVSWN +I R A F EM DV ++ +++ G + R+
Sbjct: 172 IKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQ 231
Query: 167 LFDKMP----AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ + +++ N +I Y G + A LF+ + +D+ SW LI G
Sbjct: 232 IHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINH 291
Query: 223 IDAAISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEKY---PYSNIASW 272
A+ F++M + E T SI+ G + + H Y++K +N +
Sbjct: 292 HKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQ 351
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T++I Y + G + +A +VF+ + + ++ N MIFG + + +MK+ G
Sbjct: 352 TSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIE 411
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALL 391
PD+ TF +L+ CS DLGR+I R + MI + R G + A
Sbjct: 412 PDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEE 471
Query: 392 EFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERM--RLTDFKPDD 436
+S+ + D + W S++ H K LEL E + +L +P +
Sbjct: 472 LINSMTMEPDGVIWGSLLKACKIH----KNLELGELIAQKLMKIEPKN 515
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 138/345 (40%), Gaps = 89/345 (25%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N +++A +FD RD V++ MI GY G +D A +F+++P +D+ ++N +I+G
Sbjct: 125 QNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISG 184
Query: 62 LMQSDNVQGAKEVFDGMEVRDVV--------------------------TW--------- 86
+ + A E+F+ M DV +W
Sbjct: 185 YAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSN 244
Query: 87 ----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM-- 140
N++I Y G ++ A +F G+ KDV+SWN +IG A F+EM
Sbjct: 245 LKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLK 304
Query: 141 --------------------GARDVASW-------------------TIMVNGLVREGRI 161
GA D+ W T +++ + G I
Sbjct: 305 LGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNI 364
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGL 217
A ++FD + K + + N MI G+ +G A DL +M + D ++ L++
Sbjct: 365 EAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSAC 424
Query: 218 VNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLIRNGLVKEA 257
++ D FK M E + + +I +L R+GL KEA
Sbjct: 425 SHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEA 469
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 204/637 (32%), Positives = 318/637 (49%), Gaps = 34/637 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERD-MFTYNTVIAGLMQ 64
+ EAQ +F+ + ++D W MI Y + G D A+ +F QM E D M T T +A L
Sbjct: 56 VPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNA 115
Query: 65 SDNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
+ + K DGME+ DV ++I+ Y G + A F + +DV
Sbjct: 116 CASTESLK---DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDV 172
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV----NGLVREGRIVEARKLFDK 170
VSW +I A V + LA ++ M V I + N + E + ++
Sbjct: 173 VSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSL 232
Query: 171 MPAK----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ ++ DV+ N + + + G +G A LF+ M DRD+ +W +I V + A
Sbjct: 233 VSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEA 292
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLV--------KEAHSYLEKYPYS-NIASWTNVIV 277
+ F ++ + K N I VL+ N K H +++ Y ++ T ++
Sbjct: 293 VRLFGRLQQDGIKA-NDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMS 351
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y G A K+F M ++DV W VM +N +E L+ F +M+ G P +AT
Sbjct: 352 LYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSAT 411
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+VL C+ L L GRQIH+ I+ V A+I MY +CG + A F +
Sbjct: 412 LVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMA 471
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
DI+ WNS++ A HGY ++ L+LF +M+L K D ++FV VLSA S++G V G
Sbjct: 472 KRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQ 531
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
YF M + + P Y CVVDLLGR G I EA++++ ++ G +W LLGAC
Sbjct: 532 YFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIV--LKLSGCLPDGILWMTLLGAC 589
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
R HN + A E+V+E +P++SG Y++L+ +Y + G + R+ M+ GVKKEPG
Sbjct: 590 RTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPG 649
Query: 578 CSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
S I+I + H FL GD SHP+ H + L++L++E+
Sbjct: 650 RSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEM 686
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 23/236 (9%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD A F ++L CS +D GR++H Q V +I MYA+CG++ A
Sbjct: 3 PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA--- 449
F + D+ +W +I G ++AL +F +M+ D P +T+V +L+AC+
Sbjct: 63 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 122
Query: 450 --GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
G+ G+ + F+ T ++++ + G + A + + +
Sbjct: 123 KDGMEIHGQILQQGFEGDVFVG------TALINMYNKCGSVRGAWDSFKRLEHRDV---- 172
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELE---PNNSGVYLILTEM----YLSCGR 556
W A++ AC H+ + R M+L+ PN +Y + YLS G+
Sbjct: 173 VSWTAMIAACVQHDQFALARWLYRR-MQLDGVVPNKITLYTVFNAYGDPHYLSEGK 227
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI 59
++ EA+++F+KM +RD + WN M+ Y ++G+ D + LFNQM + D ++ +V+
Sbjct: 458 GKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVL 517
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN-----GLIDEALRVFHGMP--LK 112
+ L S +V + F M +T + G V + G I EA+ + + L
Sbjct: 518 SALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLP 577
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
D + W ++GA + D A++ +++ RD
Sbjct: 578 DGILWMTLLGACRTHNKTDQAKAAAEQVLERD 609
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 206/639 (32%), Positives = 323/639 (50%), Gaps = 47/639 (7%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------------DMFTY 55
+A+N+F++M R+ V+ N ++ G K + A +F++M + F+
Sbjct: 335 DAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSE 394
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+V+ + A + G+ V N +++ Y +G I +A VF M KD V
Sbjct: 395 FSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSV 454
Query: 116 SWNLVIGAL-VNCQRMDLAESYFKEMGARDVASWTIMVN--------GLVREGRIVEARK 166
SWN +I L N D AES+ + + S +++ G + G +
Sbjct: 455 SWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDG 514
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR-RIDA 225
L + DV N ++A Y + GC +F M + D SW +I L +S +
Sbjct: 515 LKLGLDT-DVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQ 573
Query: 226 AISYFKQMPETCEKTWN----------SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNV 275
A+ YF QM W S +S L + + + H+ + KY S+ + N
Sbjct: 574 AVKYFLQM---MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNA 630
Query: 276 IVG-YFEMGEVGSAIKVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++ Y + GE+ K+F M+ TRD WN MI G N+L + + M + G
Sbjct: 631 LLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRL 690
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D+ TF ++L+ C+ + TL+ G ++HA I+ V +A++ MY++CG I A F
Sbjct: 691 DSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFF 750
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+P+ ++ SWNS+I G A HG+ EKAL+LF RM L PD +TFVGVLSACS+ G V+
Sbjct: 751 ELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVE 810
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+G +F M Y L PR H++C+VDLLGR G +DE + +N + ++ + +W +
Sbjct: 811 EGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSM---PMKPNVLIWRTV 867
Query: 514 LGACRIHN--NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
LGAC N N ++G A E ++ELEP N+ Y++L MY S + ED + MKE
Sbjct: 868 LGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAA 927
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPK----FHRLRYL 606
VKKE GCSW+ + DG HVF++GD HP+ + +LR L
Sbjct: 928 VKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLREL 966
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 159/641 (24%), Positives = 274/641 (42%), Gaps = 78/641 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + AQ LFD+M R+ VTW +I GY +NG D A F M +
Sbjct: 117 VRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFG 176
Query: 61 GLMQSDNVQGAKEVFDGMEVR----------DVVTWNSMISGY-VCNGLIDEALRVFHGM 109
+++ G G+++ DVV N +IS Y C ++A VF G+
Sbjct: 177 SALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGI 236
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESY--FKEMGARDVASWTIMVNGLVREGRIVEARK- 166
+++ +SWN +I V +R D +Y F M ++ ++ N I A
Sbjct: 237 GIRNSISWNSIIS--VYSRRGDAVSAYDLFSSM-QKEGLGFSFKPNEYTFGSLITTACSS 293
Query: 167 ------LFDKMPAK--------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
+ ++M A+ D+ + +++G+ G A+++F++M R++ S
Sbjct: 294 VDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNG 353
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI------------RNGLVKEAHSY 260
L+ GLV ++ +AA F +M + +S + +L R G AH
Sbjct: 354 LMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVI 413
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+ +A ++ Y + G + A VFELM +D WN +I GL +N+ E+
Sbjct: 414 RTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAA 473
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
+ F +M+ +G P N T S L+ C+ L + LG QIH +K+ + +VSNA++ +Y
Sbjct: 474 ESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALY 533
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLA-YHGYAEKALELFERMRLTDFKPDDITF 439
A G L FS +P +D +SWNS+I L+ +A++ F +M + +TF
Sbjct: 534 AETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTF 593
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG------------- 486
+ +LSA S L + + + KY L +A ++ G+ G
Sbjct: 594 INILSAVSSLSL-HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMS 652
Query: 487 -------------------LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG- 526
L+ +AM+L+ + G + + +L AC ++ G
Sbjct: 653 ETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGM 712
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
E+ + ++ V L +MY CGR + A R F M
Sbjct: 713 EVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELM 753
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 206/435 (47%), Gaps = 28/435 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYN-TVIA 60
++ I +A ++F+ M ++D+V+WN +I G +N ++A F++M N T+I+
Sbjct: 434 KSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLIS 493
Query: 61 GLMQSDNVQ----GAKEVFDGMEV---RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
L ++ G + DG+++ DV N++++ Y G E L+VF MP D
Sbjct: 494 TLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYD 553
Query: 114 VVSWNLVIGALVNCQ-RMDLAESYFKEM--GARDVASWT-IMVNGLVREGRIVEARKLFD 169
VSWN VIGAL + + + A YF +M G ++ T I + V + E
Sbjct: 554 QVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIH 613
Query: 170 KMPAK-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHD-RDLTSWKQLINGLVNSRRI 223
+ K D N +++ Y G + E +F +M + RD SW +I+G +++ +
Sbjct: 614 ALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELL 673
Query: 224 DAAISYFKQMPETCEK----TWNSIISVLIRNGLVK---EAHSY-LEKYPYSNIASWTNV 275
A+ M + ++ T+ +I+S ++ E H+ + S++ + +
Sbjct: 674 HKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSAL 733
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ Y + G + A + FELM R+V WN MI G + GE+ LK F +M G PD+
Sbjct: 734 VDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDH 793
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIAR-NQFTTVSNAMITMYARCGNIQSALLEFS 394
TF VL+ CS + ++ G + ++ R + + M+ + R G + +
Sbjct: 794 VTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFIN 853
Query: 395 SVPIH-DIISWNSII 408
S+P+ +++ W +++
Sbjct: 854 SMPMKPNVLIWRTVL 868
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 149/325 (45%), Gaps = 27/325 (8%)
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+E H KY + +N ++ Y +G++GSA K+F+ M+ R++ W +I G +
Sbjct: 90 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 149
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL-PT-LDLGRQIHAQAIKIARNQFT 370
N +E F M +G P++ F S L C + P+ LG QIH K
Sbjct: 150 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 209
Query: 371 TVSNAMITMYARC-GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
V N +I+MY C + A F + I + ISWNSII + G A A +LF M+
Sbjct: 210 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 269
Query: 430 T----DFKPDDITFVGVL-SACSYAGLVDQGRYYFDCM----KNKYFLQPRSAHYTCVVD 480
FKP++ TF ++ +ACS VD G + M + FLQ + +V
Sbjct: 270 EGLGFSFKPNEYTFGSLITTACSS---VDFGLCVLEQMLARVEKSGFLQDLYVS-SALVS 325
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP-- 538
RFGL D+A N+ ++ G+ ++ G ++G + K GE A + E++
Sbjct: 326 GFARFGLTDDAKNIFEQM---GVRNVVSMNGLMVGLVK----QKQGEAAAKVFHEMKDLV 378
Query: 539 -NNSGVYLILTEMYLSCGRREDAKR 562
NS Y++L + E+ +R
Sbjct: 379 GINSDSYVVLLSAFSEFSVLEEGRR 403
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 14/132 (10%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI 59
RI A F+ MP R+ +WN MI GY ++G + A+ LF +M D T+ V+
Sbjct: 741 GRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVL 800
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLK 112
+ V+ E F M +V + + + C G +DE + MP+K
Sbjct: 801 SACSHVGFVEEGFEHFKSMS--EVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMK 858
Query: 113 -DVVSWNLVIGA 123
+V+ W V+GA
Sbjct: 859 PNVLIWRTVLGA 870
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
TF S++ + R++H Q+IK +SN +I +Y R G++ SA F +
Sbjct: 73 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
++++W +I G +G ++A F M F P+ F L AC +G
Sbjct: 133 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 186
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 201/676 (29%), Positives = 343/676 (50%), Gaps = 69/676 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N + +A+ LF+KMP ++TV+ N+MI GY K+G L A LF+ M ER T+ +I
Sbjct: 63 LKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIG 122
Query: 61 GLMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCNG------LIDEALRVFHGMP 110
G Q + + A E+F M+ D VT+ +++SG CNG + ++
Sbjct: 123 GYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG--CNGHEMGNQITQVQTQIIKLGY 180
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
++ N ++ + R+DLA FKEM D S+ M+ G ++G +A LF +
Sbjct: 181 DSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVE 240
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAED---LFQKMHDRDLTS---WKQLI-NGLVN-SRR 222
M ++ A L C + D L Q++H + + W + N L++ +
Sbjct: 241 MQNSGLKPTEFTFAAVL---CANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSK 297
Query: 223 IDAAI---SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL----------EKYPY--- 266
D+ I F +MPE ++N IIS +G K A +++P+
Sbjct: 298 HDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATM 357
Query: 267 ----SNIASW----------------TNVIVG------YFEMGEVGSAIKVFELMTTRDV 300
SN W + ++VG Y + G+ A +F +T R
Sbjct: 358 LSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSA 417
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W MI + EEGL+ F +M+++ D ATF S+L + + +L LG+Q+H+
Sbjct: 418 VPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSF 477
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
IK +A++ +YA+CG+I+ A+ F +P +I+SWN++I A +G AE
Sbjct: 478 IIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEAT 537
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L+ F+ M L+ +PD ++F+GVLSACS++GLV++G ++F+ M Y L PR HY VVD
Sbjct: 538 LKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVD 597
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP-N 539
+L R G +EA L+ E+ D E+ +W ++L ACRIH N ++ A +++ +E
Sbjct: 598 MLCRSGRFNEAEKLMAEMPIDPDEI---MWSSVLNACRIHKNQELARRAADQLFNMEELR 654
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
++ Y+ ++ +Y + G+ E+ ++ M++ GVKK P SW++I H+F + D HP+
Sbjct: 655 DAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQ 714
Query: 600 FHRLRYLLNLLHTEIE 615
+R +++L +E
Sbjct: 715 IEEIRKKIDMLTKTME 730
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 4/231 (1%)
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
IDA I P+T + + ++NG + +A EK P+ N S +I GY +
Sbjct: 39 IDARIVKTGFDPDTSRSNFR--VGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKS 96
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G +G A K+F+ M R W ++I G + + +E + FVQM+ G PD TF ++L
Sbjct: 97 GNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLL 156
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
+ C+ + Q+ Q IK+ + V N ++ Y + + A F +P D +
Sbjct: 157 SGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSV 216
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
S+N++I G + G EKA+ LF M+ + KP + TF VL C+ GL D
Sbjct: 217 SYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDD 265
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 204/702 (29%), Positives = 338/702 (48%), Gaps = 100/702 (14%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------------------ 50
A +FD MPQRDTV+WN M+ GY G + A LF+ MP
Sbjct: 96 AFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTV 155
Query: 51 -DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGY----VCNGLID 100
D T+ V+ ++ G ++ G+ V+ DVVT ++++ Y V N +
Sbjct: 156 FDRTTFAVVLKSCSSLEDHGGGIQI-HGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLR 214
Query: 101 EALRVF-------------HGMPLKDVVSWNLVIGA-----LVNCQRM-DLAESYFKEMG 141
L +F HG LK ++VIG + C + D + F +
Sbjct: 215 GGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLP 274
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ- 200
++ S+ ++ G R + +EA +F + + + ++G C + DL
Sbjct: 275 NHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAX-RACAVIKGDLEGL 333
Query: 201 KMHDRDLTSWKQ----LINGLVN----SRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
++H + S Q + N +++ + A F++M +WN+II+ +NG
Sbjct: 334 QVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNG 393
Query: 253 LVKEAHSYL----------EKYPYSNI----ASWTNVIVG-------------------- 278
++ S +++ Y ++ A W + G
Sbjct: 394 NEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGI 453
Query: 279 -----YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
Y + G + A K+ + + + V WN +I G EE K F +M E G P
Sbjct: 454 ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDP 513
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
DN T+ ++L C++L T++LG+QIHAQ IK +S+ ++ MY++CGN+Q L F
Sbjct: 514 DNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIF 573
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
P D ++WN+++CG A HG E+AL++FE M+L + KP+ TF+ VL AC + GLV+
Sbjct: 574 EKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVE 633
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+G +YF M + Y L P+ HY+CVVD++GR G + +A+ L I E +W L
Sbjct: 634 KGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALEL---IEGMPFEADAVIWRTL 690
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
L C+IH N++V E A +++LEP +S Y++L+ +Y + G + ++ M+ NG+K
Sbjct: 691 LSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLK 750
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
KEPGCSWI+I H FL GD +HP+ + L++L E++
Sbjct: 751 KEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMK 792
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 124/559 (22%), Positives = 222/559 (39%), Gaps = 104/559 (18%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+F N +I ++ ++ A +VFDGM RD V+WN+M+ GY G I A ++F MP
Sbjct: 77 VFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMP- 135
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGAR-DVASWTIMV---NGLVREGRIVEARKL 167
C ++L + MG D ++ +++ + L G ++ L
Sbjct: 136 ------------GTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGL 183
Query: 168 FDKMPAK-DVQAWNLMIAGY----LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
KM DV + ++ Y + N + +LF++M + + + + L
Sbjct: 184 AVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFG 243
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIR-NGLVKEAHSYLEKYPYSNIASWTNVIVGYFE 281
D I + + + ++ N L ++ P N+ S+ +IVGY
Sbjct: 244 TDVVIG-------------TATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGY-- 288
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
+D G E L F +++SG D + +
Sbjct: 289 -----------------------------ARSDKGIEALGMFRLLQKSGLGLDEVSLSGA 319
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
C+ + G Q+H ++K V+NA++ MY +CG + A L F + D
Sbjct: 320 XRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDA 379
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC--------------- 446
+SWN+II +G EK L LF M + +PD+ T+ VL AC
Sbjct: 380 VSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNR 439
Query: 447 ---------SYAG--LVDQGRYYFDC--MKNKYFLQPRSAHYTCVV--DLLGRFGL---I 488
S+ G L+D Y C M+ L R A T V ++ F L
Sbjct: 440 IIKSRMGLDSFVGIALIDM---YSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQS 496
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLIL 547
+EA +++ G++ + +L C +++G+ ++++ E +++ + L
Sbjct: 497 EEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTL 556
Query: 548 TEMYLSCGRREDAKRIFAQ 566
+MY CG +D + IF +
Sbjct: 557 VDMYSKCGNMQDFQLIFEK 575
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 164/419 (39%), Gaps = 87/419 (20%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAGLM 63
EA +F++M RD V+WN +I + +NG + + LF M E D FTY +V+
Sbjct: 366 EACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKA-- 423
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
G + + GME+ + + + M L F G+ L D+ S
Sbjct: 424 ----CAGWQALNCGMEIHNRIIKSRM------------GLDSFVGIALIDMYS------- 460
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
C M+ AE + + V SW +++G + + EA+K F KM V N
Sbjct: 461 --KCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTY 518
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS 243
A LD V +L +++H Q+I + S DA IS ++
Sbjct: 519 ATILDTCANLVTVELGKQIH-------AQIIKKELQS---DAYIS-------------ST 555
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
++ + + G +++ EK P + +W ++ GY + G A+K+FE M +V
Sbjct: 556 LVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENV--- 612
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ-IHAQAI 362
P++ATF +VL C + ++ G H+
Sbjct: 613 ----------------------------KPNHATFLAVLRACGHMGLVEKGLHYFHSMLS 644
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKA 420
+ + ++ + R G + AL +P D + W +++ HG E A
Sbjct: 645 NYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVA 703
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 145/364 (39%), Gaps = 53/364 (14%)
Query: 232 QMPETCEKTWNSIISVLI-RNGLV--KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGS 287
Q T +KT++ I R L K+AH+ + + TN ++ Y + ++G
Sbjct: 36 QATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGF 95
Query: 288 AIKVFELMTTRDVTVWNVMIFGL-GENDLGEEGLKFF---------------VQMKESGP 331
A KVF+ M RD WN M+FG G D+G K F +M G
Sbjct: 96 AFKVFDGMPQRDTVSWNAMLFGYAGRGDIGV-AQKLFDAMPGTGCGVVELFDFRMGRMGT 154
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC----GNIQ 387
D TF VL CS L G QIH A+K+ + +A++ MYA+C +++
Sbjct: 155 VFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLR 214
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS--- 444
L F + + + L HG+A K TDF D + L
Sbjct: 215 GGLELFKEMQ-------KAGVGALQLHGHALK----------TDFGTDVVIGTATLDMYM 257
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
C+ L D F+ + N + LQ Y ++ R EA+ + ++ G+
Sbjct: 258 KCN--NLSDCSNQLFNSLPN-HNLQS----YNAIIVGYARSDKGIEALGMFRLLQKSGLG 310
Query: 505 VSPTVWGALLGACR-IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI 563
+ AC I +++ ++ G + L +N V + +MY CG +A +
Sbjct: 311 LDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLV 370
Query: 564 FAQM 567
F +M
Sbjct: 371 FEEM 374
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ +Q+ Q +F+K P RD VTWN M+ GY ++G + A+ +F M ++ +
Sbjct: 562 KCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLA 621
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISG---------YVC-------NGLIDEALRV 105
++++ G E + + ++SM+S Y C +G + +AL +
Sbjct: 622 VLRACGHMGLVE-------KGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALEL 674
Query: 106 FHGMPLK-DVVSWNLVIGALV---NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRI 161
GMP + D V W ++ N + + A ++ D A++ ++ N G
Sbjct: 675 IEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMW 734
Query: 162 VEARKL 167
E KL
Sbjct: 735 NEVTKL 740
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 195/566 (34%), Positives = 296/566 (52%), Gaps = 42/566 (7%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D+F ++++ + V A+++FD M R++V+W +MISGY + EAL VF M
Sbjct: 146 DVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMR 205
Query: 111 LKDVVSWNL-------VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REG 159
L V NL V+ ALV + +D + + V + ++N LV + G
Sbjct: 206 L---VEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCG 262
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
+ + LF+ K+ W+ +I GY G A LF KMH + + G++
Sbjct: 263 NLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLK 322
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVG 278
+ AAI KQ H YL K Y + I + T ++
Sbjct: 323 ACSDVAAIEEGKQ------------------------THGYLLKSGYETQIYTATALVDM 358
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G G A K F+ + D+ +W +I G +N EE L + +M+ P+ T
Sbjct: 359 YAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTM 418
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
SVL CS+L L+ G+QIHA+ IK ++ +A+ TMYA+CG+++ +L F +
Sbjct: 419 ASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQ 478
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
DI+SWN++I GL+ +G+ +ALELFE MRL KPD ITFV VLSACS+ G+V +G Y
Sbjct: 479 RDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAY 538
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F+ M +++ L PR HY C+VD+L R G ++EA I + I+ +W LL ACR
Sbjct: 539 FNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEF---IESAIIDHGMCLWRILLPACR 595
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
H N ++G AGE++MEL S Y++L+ +Y + GR D R+ MK GV+KE GC
Sbjct: 596 NHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGC 655
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLR 604
SWI++ HVF+ GD HP+ ++
Sbjct: 656 SWIELKSHVHVFVVGDQIHPQIEEIQ 681
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 202/455 (44%), Gaps = 43/455 (9%)
Query: 53 FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDE--ALRVFHGMP 110
+ N +I + ++ GAK VF+ ++ ++VV++N +I G NG L +F M
Sbjct: 44 YLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMI 103
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESY---------FKEMGARDVASWTIMVNGLVREGRI 161
+++ + ++L ++ K DV + +VN + G +
Sbjct: 104 ANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCV 163
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
EARKLFD+MP +++ +W MI+GY A +F M +L+ G +N
Sbjct: 164 FEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLM---------RLVEGNLN-- 212
Query: 222 RIDAAISYFKQMPETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG 278
E + S++S L+ V K+ H + K S N +V
Sbjct: 213 ----------------EFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVT 256
Query: 279 -YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + G + ++ +FE+ + ++ W+ +I G + + LK F +M +G P T
Sbjct: 257 MYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFT 316
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
VL CSD+ ++ G+Q H +K + A++ MYA+ G A F +
Sbjct: 317 LVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLL 376
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
D++ W SII G +G E+AL ++ RM++ P+++T VL ACS ++QG+
Sbjct: 377 EPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGK- 435
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
KY L P + + + + + G ++E +
Sbjct: 436 QIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGV 470
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 200/480 (41%), Gaps = 89/480 (18%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAGLM 63
EA+ LFD+MP+R+ V+W MI GY A+ +F M + F + +V++ L+
Sbjct: 165 EARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALV 224
Query: 64 QSDNVQGAKEV-----------------------------------FDGMEVRDVVTWNS 88
+ V K+V F+ ++ +TW++
Sbjct: 225 CPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSA 284
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQRMDLAE------SYFKEMG 141
+I+GY G +AL++F M V ++G L C + E Y + G
Sbjct: 285 LITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSG 344
Query: 142 -ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
+ + T +V+ + G +ARK FD + D+ W +IAGY+ NG A ++
Sbjct: 345 YETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYG 404
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
+M R + + + ++ + AA+ KQ I + I+ GL
Sbjct: 405 RMQMRKILPNELTMASVLKACSNLAALEQGKQ-----------IHARTIKYGLG------ 447
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
P +I S + + Y + G + + +F M RD+ WN MI GL +N G E L
Sbjct: 448 ----PELSIRSALSTM--YAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREAL 501
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-----A 375
+ F +M+ G PD+ TF +VL+ CS + + G + ++F V
Sbjct: 502 ELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAY----FNMMFDEFCLVPRVEHYAC 557
Query: 376 MITMYARCGNIQSALLEF--SSVPIHDIISWNSII------CGLAYHGYA-EKALELFER 426
M+ + +R G + A EF S++ H + W ++ C YA EK +EL R
Sbjct: 558 MVDVLSRAGKLNEA-KEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSR 616
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR-NQFTTVSNAMITMYARCGNIQSALL 391
P N +F ++L +D +L G+ +HA IKI + ++N +I YA+CG++ A L
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 392 EFSSVPIHDIISWNSIICGLAYHGY--AEKALELFERMRLTDFKPDDITFVGVLSACS 447
F ++ +++S+N +I GL+++G + LELF RM + PD TF GV +A +
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAA 122
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
++E +F +M QRD V+WN MI G +NG A+ LF +M + D T+ TV++
Sbjct: 466 LEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSA 525
Query: 62 LMQSDNVQGAKEVFDGM-----EVRDVVTWNSMISGYVCNGLIDEALRVF------HGMP 110
V+ F+ M V V + M+ G ++EA HGM
Sbjct: 526 CSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMC 585
Query: 111 LKDVVSWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
L W +++ A N +L A E+G+R+ +++ ++ + GR+ + ++
Sbjct: 586 L-----WRILLPACRNHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRV 640
Query: 168 FDKMPAKDVQ 177
M + V+
Sbjct: 641 RRMMKVRGVR 650
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 288/541 (53%), Gaps = 39/541 (7%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYF 137
+V +N++ISG++ NG +E + M + D ++ I A ++ +
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIKKIHGLL 162
Query: 138 KEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
+ G DV + +VN ++ G + A+ F+++P +DV WN M+ GY G +
Sbjct: 163 FKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVL 222
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
+ F++M+D + + + G+ +S F M + + NG +
Sbjct: 223 ETFRRMNDESVVPSRFTVTGV---------LSVFAVMGD-------------LNNGRI-- 258
Query: 257 AHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
H + K Y S +A ++I Y + + A+++FE+M +D+ WN ++ +
Sbjct: 259 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGD 318
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ------F 369
+ L+ +M +G PD T T+VL CS L L GR+IH I +
Sbjct: 319 HDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD 378
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
+ NA+I MYA+CG+++ A L F + D+ SWN +I G HGY +ALE+F RM
Sbjct: 379 VLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCE 438
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
KPD++TFVGVLSACS+AG V QGR + MK+KY + P HYTCV+D+LGR G +D
Sbjct: 439 VQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLD 498
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
EA L + IE +P VW ALL ACR+H + + E+A +RV ELEP + G Y++++
Sbjct: 499 EAYELALTMP---IEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSN 555
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNL 609
+Y + GR E+ + M++ V+K PGCSWI++ +G HVF+S D +HP+ H + LN
Sbjct: 556 VYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNS 615
Query: 610 L 610
L
Sbjct: 616 L 616
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 11/290 (3%)
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK--EAHSYLEKYPYSNIA-SWTNV 275
N I AI F+Q P S+ + L K E HSY+ + N S T++
Sbjct: 20 NFSSISTAIQSFQQ-PYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSL 78
Query: 276 IVGYFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
I Y + ++ A+ +F T +V +N +I G N EEG +F+ +M+ G PD
Sbjct: 79 INMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPD 138
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
TF + C D+ + ++IH K + +A++ Y + G ++ A + F
Sbjct: 139 KFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFE 195
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+PI D++ WN+++ G A G E LE F RM P T GVLS + G ++
Sbjct: 196 ELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNN 255
Query: 455 GRYYFD-CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
GR MK Y A ++D+ G+ I++A+ + +R I
Sbjct: 256 GRIIHGFAMKMGY--DSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDI 303
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 179/437 (40%), Gaps = 66/437 (15%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGA 71
LF + D + ++ Y K G +++A F ++P RD+ +N ++ G Q +
Sbjct: 162 LFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMV 221
Query: 72 KEVFDGMEVRDVV----TWNSMISGYVCNGLIDEALRVFHGMPLK-----DVVSWNLVIG 122
E F M VV T ++S + G ++ R+ HG +K V N +I
Sbjct: 222 LETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNG-RIIHGFAMKMGYDSGVAVSNSLID 280
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
C+ ++ A F+ M +D+ SW +V+ + G +L D+M +Q +L+
Sbjct: 281 MYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQP-DLV 339
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL-VNSRRIDAAISYFKQMPETCEKTW 241
+ C +A MH R++ + +++GL + + ID +
Sbjct: 340 TVTTVLPACSHLA----ALMHGREIHGY-MIVSGLGKDGKDIDDVL------------LK 382
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N++I + + G +++AH E+ ++ASW
Sbjct: 383 NAVIDMYAKCGSMRDAHLVFERMSNKDVASW----------------------------- 413
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
N+MI G G + G E L+ F +M E PD TF VL+ CS + GR Q
Sbjct: 414 --NIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQ- 470
Query: 362 IKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAE 418
+K + T+ + +I M R G + A ++PI + + W +++ H +A
Sbjct: 471 MKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHA- 529
Query: 419 KALELFERMRLTDFKPD 435
L R+ + +P+
Sbjct: 530 -VLAEVAAQRVFELEPE 545
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 139/337 (41%), Gaps = 38/337 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ AQ F+++P RD V WN M+ GY + G + + F +M + + + G++
Sbjct: 187 MEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSV 246
Query: 66 DNVQG---AKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
V G + G ++ V NS+I Y I++AL +F M KD+ SW
Sbjct: 247 FAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSW 306
Query: 118 NLVIGALVNCQRMDLAESYFKEM-GA---RDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
N ++ C D M GA D+ + T ++ ++ R++ M
Sbjct: 307 NSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIV 366
Query: 174 K----------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
DV N +I Y G + A +F++M ++D+ SW +I G
Sbjct: 367 SGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYG 426
Query: 224 DAAISYFKQMPETC----EKTWNSIISVLIRNGLVKEAHSYL----EKYPYS-NIASWTN 274
+ A+ F +M E E T+ ++S G V + ++L KY + I +T
Sbjct: 427 NEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTC 486
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDV----TVWNVMI 307
VI +G G + +EL T + VW ++
Sbjct: 487 VID---MLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAG 61
+++A +F++M +D +WN+MI GY +G+ + A+ +F++M E D T+ V++
Sbjct: 395 MRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSA 454
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLK-D 113
+ V + M+ + V I Y C G +DEA + MP++ +
Sbjct: 455 CSHAGFVSQGRNFLVQMKSKYDVA--PTIEHYTCVIDMLGRAGQLDEAYELALTMPIEAN 512
Query: 114 VVSWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
V W ++ A + LAE + E+ S+ +M N GR E ++
Sbjct: 513 PVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHT 572
Query: 171 MPAKDVQ 177
M ++V+
Sbjct: 573 MRQQNVR 579
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 198/662 (29%), Positives = 341/662 (51%), Gaps = 76/662 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N + +A+ LF+KMP ++TV+ N+MI GY K+G L A LF+ M ER T+ +I
Sbjct: 58 LKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIG 117
Query: 61 GLMQSDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNG------LIDEALRVFHGMP 110
G Q + + A E+F M+ D VT+ +++SG CNG + ++
Sbjct: 118 GYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG--CNGHEMGNQITQVQTQIIKLGY 175
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEM----------------GARDVA-------- 146
++ N ++ + R+DLA FKEM G D+
Sbjct: 176 DSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSF 235
Query: 147 ------SWTIMV-NGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
W + V N L+ + +++ARKLFD+MP +D ++N++I+GY +G A
Sbjct: 236 VIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYA 295
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
DLF+++ T++ + KQ P T SI S + + +
Sbjct: 296 FDLFRELQ---FTAFDR------------------KQFPFA---TMLSIASNTLDWEMGR 331
Query: 256 EAHSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+ H+ + S I +++ Y + G+ A +F +T R W MI +
Sbjct: 332 QIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKG 391
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
EEGL+ F +M+++ D ATF S+L + + +L LG+Q+H+ IK +
Sbjct: 392 FYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGS 451
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
A++ +YA+CG+I+ A+ F +P +I+SWN++I A +G AE L+ F+ M L+ +P
Sbjct: 452 ALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQP 511
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
D ++F+GVLSACS++GLV++G ++F+ M Y L PR HY VVD+L R G +EA L
Sbjct: 512 DSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKL 571
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP-NNSGVYLILTEMYLS 553
+ E+ D E+ +W ++L ACRIH N ++ A +++ +E ++ Y+ ++ +Y +
Sbjct: 572 MAEMPIDPDEI---MWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAA 628
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
G+ E+ ++ M++ GVKK P SW++I H+F + D HP+ +R +++L
Sbjct: 629 AGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKT 688
Query: 614 IE 615
+E
Sbjct: 689 ME 690
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 172/449 (38%), Gaps = 103/449 (22%)
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
IDA I P+T + + ++NG + +A EK P+ N S +I GY +
Sbjct: 34 IDARIVKTGFDPDTSRSNFR--VGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKS 91
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G +G A K+F+ M R W ++I G + + +E + FVQM+ G PD TF ++L
Sbjct: 92 GNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLL 151
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR-------------------- 382
+ C+ + Q+ Q IK+ + V N ++ Y +
Sbjct: 152 SGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSF 211
Query: 383 ------CGNI--------------------------QSALLEFSS--------------V 396
C NI +ALL+F S +
Sbjct: 212 TFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEM 271
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
P D +S+N II G A+ G + A +LF ++ T F F +LS S + GR
Sbjct: 272 PEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGR 331
Query: 457 -----------------------YYFDCMKNKYF------LQPRSA-HYTCVVDLLGRFG 486
Y C K + L RSA +T ++ + G
Sbjct: 332 QIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKG 391
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME---LEPNNSGV 543
+E + L N++R + + +LL A ++ +G+ +++ + SG
Sbjct: 392 FYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGS 451
Query: 544 YLILTEMYLSCGRREDAKRIFAQMKENGV 572
L+ ++Y CG +DA + F +M + +
Sbjct: 452 ALL--DVYAKCGSIKDAVQTFQEMPDRNI 478
>gi|310656753|gb|ADP02188.1| PPR domain-containing protein [Triticum aestivum]
Length = 788
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 196/625 (31%), Positives = 318/625 (50%), Gaps = 27/625 (4%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I A+ LFD MP R V++ M+ K G + A+ L+ Q P + + I+G +++
Sbjct: 165 IASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISGFVRN 224
Query: 66 DNVQGAKEVFDGM---EVR-DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD------VV 115
+ A VF M VR + +T MI V G AL + G+ +K +
Sbjct: 225 ELHHNALGVFRKMLSCRVRPNGITIVCMIKACVGAGEFGLALSIV-GLAIKSNFFESSIE 283
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
N +I + A F EM +DV SWT +++ G + AR++ D MP ++
Sbjct: 284 VQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPERN 343
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKM----HDRDLTSWKQLING------LVNSRRIDA 225
+W +IA + G A L+ +M +++ + +++ L RI A
Sbjct: 344 EVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACASLEDLRGGARIHA 403
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEV 285
K T S+I + + +A + + P NI W +++ GY G++
Sbjct: 404 --RSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQKNIVCWNSLVSGYSYNGKM 461
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A+ +F+ M R++ WN +I G +N + LK F M SG P TF+SVL C
Sbjct: 462 VEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALKSFNAMLASGQVPGEITFSSVLLAC 521
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
++L +L G+ HA+ IK+ + + A+ MYA+ G++QS+ F +P + ++W
Sbjct: 522 ANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWT 581
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNK 465
++I GLA +G+AE+++ LFE M T P++ TF+ +L ACS+ GLV+Q +YFD M+
Sbjct: 582 AMIQGLAENGFAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFDKMQ-A 640
Query: 466 YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKV 525
+ P+ HYTC+VD+L R G + EA LL + + S W ALL AC + N ++
Sbjct: 641 LGISPKEKHYTCMVDVLARAGRLAEAEALLMKTPSKSEANS---WAALLSACNTYRNEEI 697
Query: 526 GEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
E A +R+ EL +N+ Y++L+ MY SCGR +DA RI MK +KK+ GCSW+Q+
Sbjct: 698 AERAAKRLHELAKDNTAGYVLLSNMYASCGRWKDAARIRVLMKGTTLKKDGGCSWVQVRG 757
Query: 586 GGHVFLSGDSSHPKFHRLRYLLNLL 610
H F S ++ HP + +L+LL
Sbjct: 758 QYHAFFSWEAKHPLSMEIDEILDLL 782
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 217/494 (43%), Gaps = 53/494 (10%)
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVS---WNLVIGALVNCQRMDLAESYFKEMGARDV 145
+++ Y E R F D S ++ ++ V + A F M R V
Sbjct: 121 LLTTYAAFARAAERDRAFGDCVAADAASPFAYDFMVSEHVKAGDIASARRLFDGMPDRTV 180
Query: 146 ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
S+T MV+ L++ GR+ EA +L+++ P+ V + I+G++ N A +F+KM
Sbjct: 181 VSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFFTATISGFVRNELHHNALGVFRKMLSC 240
Query: 206 DL----TSWKQLINGLVNSRRIDAAISYF-----KQMPETCEKTWNSIISVLIRNGLVKE 256
+ + +I V + A+S E+ + NS+I++ +R G
Sbjct: 241 RVRPNGITIVCMIKACVGAGEFGLALSIVGLAIKSNFFESSIEVQNSLITLYLRMGDAAA 300
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
A ++ ++ SWT ++ Y E G++ A +V + M R+ W +I +
Sbjct: 301 ARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNA 360
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
E +K + QM G P+ + F+SVL+ C+ L L G +IHA+++K+ + VS ++
Sbjct: 361 AEAVKLYSQMLADGCRPNISCFSSVLSACASLEDLRGGARIHARSLKMGSSTNVFVSCSL 420
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
I MY +C A F ++P +I+ WNS++ G +Y+G +A+ LF++M + +
Sbjct: 421 IDMYCKCNKCGDAQTIFDTLPQKNIVCWNSLVSGYSYNGKMVEAMYLFKKMPARNLASWN 480
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
G YA Q R + D +K+ N
Sbjct: 481 TIISG------YA----QNRQFVDALKS------------------------------FN 500
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS-GVYLILTEMYLSCG 555
+ A G + ++L AC ++ G++A + ++L S + L++MY G
Sbjct: 501 AMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYAKSG 560
Query: 556 RREDAKRIFAQMKE 569
+ +KR+F QM E
Sbjct: 561 DLQSSKRMFYQMPE 574
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 52/276 (18%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN-GFLD-----NAMCLFNQMPERDMFT-- 54
N ++ EA LF KMP R+ +WN +I GY +N F+D NAM Q+P F+
Sbjct: 458 NGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALKSFNAMLASGQVPGEITFSSV 517
Query: 55 ------YNTVIAGLM-------------------------QSDNVQGAKEVFDGMEVRDV 83
+++ G M +S ++Q +K +F M R+
Sbjct: 518 LLACANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERND 577
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-SWNLVIGALVNCQRMDLAES---YFKE 139
VTW +MI G NG +E++ +F M + + + + L C L E YF +
Sbjct: 578 VTWTAMIQGLAENGFAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFDK 637
Query: 140 MGARDVAS----WTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGV 194
M A ++ +T MV+ L R GR+ EA L K P+K + +W +++ +
Sbjct: 638 MQALGISPKEKHYTCMVDVLARAGRLAEAEALLMKTPSKSEANSWAALLSACNTYRNEEI 697
Query: 195 AEDLFQKMHD--RDLTSWKQLINGLVNS--RRIDAA 226
AE +++H+ +D T+ L++ + S R DAA
Sbjct: 698 AERAAKRLHELAKDNTAGYVLLSNMYASCGRWKDAA 733
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 133/337 (39%), Gaps = 46/337 (13%)
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
++ ++S ++ G + A + P + S+T ++ + G V A++++E +
Sbjct: 151 AYDFMVSEHVKAGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQCPSGS 210
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
V + I G N+L L F +M P+ T ++ C L I
Sbjct: 211 VAFFTATISGFVRNELHHNALGVFRKMLSCRVRPNGITIVCMIKACVGAGEFGLALSIVG 270
Query: 360 QAIKIARNQFTT---VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
AIK N F + V N++IT+Y R G+ +A F + + D++SW ++
Sbjct: 271 LAIK--SNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTAL--------- 319
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
L S +G +D R D M + +
Sbjct: 320 --------------------------LDVYSESGDLDGARRVLDAMPER-----NEVSWG 348
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
++ + G EA+ L +++ ADG + + + ++L AC +++ G R +++
Sbjct: 349 TLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACASLEDLRGGARIHARSLKM 408
Query: 537 -EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
N V L +MY C + DA+ IF + + +
Sbjct: 409 GSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQKNI 445
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
++ +Q ++ +F +MP+R+ VTW MI+G +NGF + ++ LF M M T+
Sbjct: 558 KSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFAEESILLFEDMMATGMTPNEHTFLA 617
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVT----WNSMISGYVCNGLIDEALRVFHGMPLK- 112
++ V+ A FD M+ + + M+ G + EA + P K
Sbjct: 618 LLFACSHGGLVEQAIHYFDKMQALGISPKEKHYTCMVDVLARAGRLAEAEALLMKTPSKS 677
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGRIVEARKL 167
+ SW ++ A + ++AE K E+ + A + ++ N GR +A ++
Sbjct: 678 EANSWAALLSACNTYRNEEIAERAAKRLHELAKDNTAGYVLLSNMYASCGRWKDAARI 735
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 191/622 (30%), Positives = 313/622 (50%), Gaps = 27/622 (4%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNT--------VIAGLMQSDNVQG 70
RD +WN I G +NG A+ LF +M + D F+ N+ V A L Q ++ +
Sbjct: 228 RDVASWNSAISGCVQNGMFLEALDLFRRM-QSDGFSMNSYTTVGVLQVCAELAQLNHGRE 286
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
+ N+++ Y G +D ALRVF + KD +SWN ++ V +
Sbjct: 287 LHAALLKCGTEFNIQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLY 346
Query: 131 DLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKL----FDKMPAKDVQAWNLM 182
A +F EM D A +++ + GR++ R++ + D+Q N +
Sbjct: 347 AEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTL 406
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT-- 240
+ Y+ V + +F +M +D SW +I S R AI F+ + K
Sbjct: 407 MDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDP 466
Query: 241 --WNSII---SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
SI+ S L L+K+ HSY + ++ +I Y E GEV A+ +FE++
Sbjct: 467 MMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYALNIFEML 526
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+D+ W M+ EN L E + F +M +G PD+ +L + L +L G+
Sbjct: 527 DKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGK 586
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+IH I+ V ++++ MY+ CG++ AL F D++ W ++I HG
Sbjct: 587 EIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHG 646
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
+ ++A+ +F+RM T PD ++F+ +L ACS++ LVD+G++Y D M +KY LQP HY
Sbjct: 647 HGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHY 706
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
CVVDLLGR G +EA I++ +E VW ALLGACRIH N ++ IA ++++E
Sbjct: 707 ACVVDLLGRSGQTEEAYKF---IKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLE 763
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
LEP+N G Y++++ ++ G+ + K I +M E G++K+P CSWI+I + H F + D
Sbjct: 764 LEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDH 823
Query: 596 SHPKFHRLRYLLNLLHTEIERE 617
SH + L + ++ RE
Sbjct: 824 SHRDSQAIHLKLAEITEKLRRE 845
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 143/611 (23%), Positives = 258/611 (42%), Gaps = 77/611 (12%)
Query: 31 YFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV------ 84
Y K G L +A LF+ MP R +F++N +I + S A V+ M + V
Sbjct: 103 YGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPD 162
Query: 85 --TWNSMISGYVCNGLIDEALRVFHGMPLK-----DVVSWNLVIGALVNCQRMDLAESYF 137
T S++ G V HG+ +K + N ++G C +D A F
Sbjct: 163 GCTLASVLKACGAEGDGRCGSEV-HGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVF 221
Query: 138 KEM-GARDVASWTIMVNGLVREGRIVEARKLFDKMPA----------------------- 173
+ M RDVASW ++G V+ G +EA LF +M +
Sbjct: 222 EWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQL 281
Query: 174 ---KDVQA------------WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
+++ A N ++ Y G V A +F+++ D+D SW +++ V
Sbjct: 282 NHGRELHAALLKCGTEFNIQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYV 341
Query: 219 NSRRIDAAISYFKQMPE-------TCEKTWNSIISVLIR--NGLVKEAHSYLEKYPYSNI 269
+R AI +F +M + C + S + L R NG +E H+Y K +
Sbjct: 342 QNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLING--REVHAYAVKQRLDSD 399
Query: 270 ASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
N ++ Y + V + +VF+ M +D W +I ++ E + F ++
Sbjct: 400 LQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQK 459
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF--TTVSNAMITMYARCGNI 386
G D S+L CS L ++ L +Q+H+ AI RN + N +I +Y CG +
Sbjct: 460 EGIKVDPMMMGSILEACSGLKSISLLKQVHSYAI---RNGLLDLILKNRIIDIYGECGEV 516
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
AL F + DI++W S++ A +G +A+ LF +M +PD + VG+L A
Sbjct: 517 CYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAI 576
Query: 447 SYAGLVDQGRYYFD-CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
+ + +G+ ++ K+ ++ A + +VD+ G ++ A+ + +E + +
Sbjct: 577 AGLSSLTKGKEIHGFLIRGKFPVE--GAVVSSLVDMYSGCGSMNYALKVFDEAKCKDV-- 632
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
+W A++ A +H + K +R++E + V + S + D + +
Sbjct: 633 --VLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYL 690
Query: 566 QMKENGVKKEP 576
M + K +P
Sbjct: 691 DMMVSKYKLQP 701
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 137/287 (47%), Gaps = 21/287 (7%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP- 331
T ++ Y + G + A ++F+ M R V WN +I + E + + M+ S P
Sbjct: 97 TKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPV 156
Query: 332 ---SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
+PD T SVL C G ++H A+K ++ T V+NA++ MYA+CG + S
Sbjct: 157 AGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDS 216
Query: 389 ALLEFSSV-PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
AL F + D+ SWNS I G +G +AL+LF RM+ F + T VGVL C+
Sbjct: 217 ALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCA 276
Query: 448 YAGLVDQGRYYFDCM---KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
++ GR + ++ +Q + ++ + R G +D A+ + EI D
Sbjct: 277 ELAQLNHGRELHAALLKCGTEFNIQCNA-----LLVMYARCGWVDSALRVFREI-GDKDY 330
Query: 505 VSPTVWGALLGACRIHNNIKVGEIA--GERVME-LEPNNSGVYLILT 548
+S W ++L +C + N + I GE V P+++ + +L+
Sbjct: 331 IS---WNSML-SCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLS 373
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 15/215 (6%)
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK---IARNQ 368
+ DL E + + P + VL + + + GRQ+HA A+ + +
Sbjct: 32 DGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDD 91
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
++ ++ MY +CG + A F +P + SWN++I G A +A+ ++ MR
Sbjct: 92 AGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMR 151
Query: 429 LTD----FKPDDITFVGVLSACSYAGLVDQGRYYFDC--MKNKYFLQPRSAHYTCVVDLL 482
++ PD T VL AC G GR + + K L + +V +
Sbjct: 152 ASEPVAGAAPDGCTLASVLKACGAEG---DGRCGSEVHGLAVKSGLDRSTLVANALVGMY 208
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ GL+D A+ + +R DG +V+ W + + C
Sbjct: 209 AKCGLLDSALRVFEWMR-DGRDVAS--WNSAISGC 240
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 192/559 (34%), Positives = 301/559 (53%), Gaps = 55/559 (9%)
Query: 35 GFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDV----VTWNSMI 90
G L A+ LF + + + F +NT+I G S + GA + + M + V T+ ++
Sbjct: 80 GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLL 139
Query: 91 SGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTI 150
G E ++ HG LK + L F T
Sbjct: 140 KSCAKVGATQEGKQI-HGHVLK-----------------LGLESDPFVH---------TS 172
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
++N + G + A +F K +D ++ +I GY GC+ A LF+++ RD SW
Sbjct: 173 LINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSW 232
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLVKEAH---SYLEK 263
+I G S R + A+++F++M E T +++S ++G ++ + S++E
Sbjct: 233 NAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIED 292
Query: 264 YPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ SN+ +I Y + G++ A +FE + +D+ WNVMI G + +E L
Sbjct: 293 HGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALAL 352
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-----AMI 377
F +M++S P++ TF S+L C+ L LDLG+ IHA K +F ++N ++I
Sbjct: 353 FRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDK----KFLGLTNTSLWTSLI 408
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
MYA+CGNI++A F+ + + SWN++I GLA HG+A ALELF +MR F+PDDI
Sbjct: 409 DMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDI 468
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN- 496
TFVGVLSACS+AGLV+ GR F M Y + P+ HY C++DLLGR GL DEA L+
Sbjct: 469 TFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKN 528
Query: 497 -EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
E++ DG +WG+LLGACR+H N+++GE A + + ELEP N G Y++L+ +Y + G
Sbjct: 529 MEMKPDG-----AIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAG 583
Query: 556 RREDAKRIFAQMKENGVKK 574
R +D RI ++ + G+KK
Sbjct: 584 RWDDVARIRTKLNDKGMKK 602
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 221/513 (43%), Gaps = 83/513 (16%)
Query: 18 QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
+ D +I Y +NG L A +F++ RD ++ +I G + A+ +F+
Sbjct: 164 ESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEE 223
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV----SWNLVIGALVNCQRMDLA 133
+ VRD V+WN+MI+GY +G +EAL F M +V + V+ A ++L
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELG 283
Query: 134 ---ESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
S+ ++ G + S +VN L+ + G + +AR LF+ + KD+ +WN+MI GY
Sbjct: 284 NWVRSWIEDHG---LGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGY 340
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIIS 246
A LF+KM ++ E + T+ SI+
Sbjct: 341 SHMNSYKEALALFRKMQQSNV---------------------------EPNDVTFVSILP 373
Query: 247 VLIRNG---LVKEAHSYLEK--YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
G L K H+Y++K +N + WT++I Y + G + +A +VF M + +
Sbjct: 374 ACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLG 433
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN MI GL + L+ F QM++ G PD+ TF VL+ CS ++LGRQ +
Sbjct: 434 SWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFS-- 491
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
+M+ Y +Q + +I L G ++A
Sbjct: 492 -------------SMVEDYDISPKLQ---------------HYGCMIDLLGRAGLFDEAE 523
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS-AHYTCVVD 480
L + M + KPD + +L AC G V+ G + K+ + L+P + Y + +
Sbjct: 524 ALMKNMEM---KPDGAIWGSLLGACRVHGNVELGEF---AAKHLFELEPENPGAYVLLSN 577
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+ G D+ + ++ G++ ++ L
Sbjct: 578 IYATAGRWDDVARIRTKLNDKGMKKXQDIYKML 610
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 164/386 (42%), Gaps = 68/386 (17%)
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGS---AIKVFELMTTRDVTVWNVMIFGL 310
+K+ HS + K N + ++ + + G+ A+ +FE + + +WN MI G
Sbjct: 48 LKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGN 107
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+ + F+V+M G P++ TF +L C+ + G+QIH +K+
Sbjct: 108 SLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDP 167
Query: 371 TVSNAMITMYARCGNIQSALLEFSS-------------------------------VPIH 399
V ++I MYA+ G + A L FS +P+
Sbjct: 168 FVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR 227
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
D +SWN++I G A G E+AL F+ M+ + P++ T V VLSAC+ +G ++ G +
Sbjct: 228 DAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVR 287
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLID------------------------------ 489
+++ + L ++D+ + G +D
Sbjct: 288 SWIED-HGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSY 346
Query: 490 -EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYLI 546
EA+ L +++ +E + + ++L AC + +G+ + + L N+ ++
Sbjct: 347 KEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTS 406
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGV 572
L +MY CG E AK++FA MK +
Sbjct: 407 LIDMYAKCGNIEAAKQVFAGMKPKSL 432
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 162/387 (41%), Gaps = 95/387 (24%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N + A+ +F K RD V++ +I GY G LD+A LF ++P RD ++N +IAG
Sbjct: 179 QNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAG 238
Query: 62 LMQSDNVQGAKEVFDGMEVRDVV--------------------------TW--------- 86
QS + A F M+ +V +W
Sbjct: 239 YAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSN 298
Query: 87 ----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM-- 140
N++I Y G +D+A +F G+ KD++SWN++IG + A + F++M
Sbjct: 299 LRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQ 358
Query: 141 --------------------GARDVAS------------------WTIMVNGLVREGRIV 162
GA D+ WT +++ + G I
Sbjct: 359 SNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIE 418
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLV 218
A+++F M K + +WN MI+G +G +A +LF++M D D ++ +++
Sbjct: 419 AAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACS 478
Query: 219 NSRRIDAAISYFKQMPETCE-----KTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASW 272
++ ++ F M E + + + +I +L R GL EA + ++ + A W
Sbjct: 479 HAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIW 538
Query: 273 TNV-----IVGYFEMGEVGSAIKVFEL 294
++ + G E+GE +A +FEL
Sbjct: 539 GSLLGACRVHGNVELGEF-AAKHLFEL 564
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 197/642 (30%), Positives = 333/642 (51%), Gaps = 34/642 (5%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+I LFD++ Q+D V WNVM+ GY K G LD+ + F+ M D + N V +
Sbjct: 187 GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVM-RMDQISPNAVTFDCV 245
Query: 64 QSDNVQGAKEVFD-GMEVRDVVTW----------NSMISGYVCNGLIDEALRVFHGMPLK 112
S V +K + D G+++ +V NS++S Y G D+A ++F M
Sbjct: 246 LS--VCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRA 303
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
D V+WN +I V M+ + ++F EM + V I + L+ E + ++
Sbjct: 304 DTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIH 363
Query: 173 --------AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
+ D+ + +I Y V +A+++F + + D+ + +I+G +++
Sbjct: 364 CYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYI 423
Query: 225 AAISYFKQMPETC----EKTWNSI---ISVLIRNGLVKEAHSYLEKYPYSNIASW-TNVI 276
++ F+ + + E T SI I +L+ L +E H ++ K + N + VI
Sbjct: 424 DSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVI 483
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A ++FE ++ RD+ WN MI ++D + F QM SG D
Sbjct: 484 DMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCV 543
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
+ ++ L+ C++LP+ G+ IH IK + + +I MYA+CGN+++A+ F ++
Sbjct: 544 SISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM 603
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSACSYAGLVDQG 455
+I+SWNSII HG + +L LF M + +PD ITF+ ++S+C + G VD+G
Sbjct: 604 KEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEG 663
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
+F M Y +QP+ HY CVVDL GR G + EA +++ VWG LLG
Sbjct: 664 VRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA---YETVKSMPFPPDAGVWGTLLG 720
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
ACR+H N+++ E+A ++M+L+P+NSG Y++++ + + E ++ + MKE V+K
Sbjct: 721 ACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKI 780
Query: 576 PGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
PG SWI+IN H+F+SGD +HP+ + LLN L E+ E
Sbjct: 781 PGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLE 822
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 142/602 (23%), Positives = 251/602 (41%), Gaps = 89/602 (14%)
Query: 24 WNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAGLMQSDNVQGAKEVFD--- 76
WN +I + +NG L+ A+ + +M D+ T+ ++ + N +G + D
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 77 --GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAE 134
GM+ + V +S+I Y+ G ID ++F + KD V WN+++ C +D
Sbjct: 166 SLGMDCNEFVA-SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 135 SYFKEM-------------------GARDVASWTIMVNGLV------------------- 156
F M ++ + + ++GLV
Sbjct: 225 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY 284
Query: 157 -REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
+ GR +A KLF M D WN MI+GY+ +G + + LT + ++I+
Sbjct: 285 SKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG-----------LMEESLTFFYEMIS 333
Query: 216 GLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTN 274
V + AI++ +P +S K+ H Y+ ++ S +I +
Sbjct: 334 SGV----LPDAITFSSLLPS---------VSKFENLEYCKQIHCYIMRHSISLDIFLTSA 380
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+I YF+ V A +F + DV V+ MI G N L + L+ F + + SP+
Sbjct: 381 LIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPN 440
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
T S+L + L L LGR++H IK + + A+I MYA+CG + A F
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE 500
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+ DI+SWNS+I A A+++F +M ++ D ++ LSAC+
Sbjct: 501 RLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESF 560
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
G+ M K+ L + ++D+ + G + AMN+ ++ I W +++
Sbjct: 561 GKAIHGFMI-KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNI----VSWNSII 615
Query: 515 GACRIHNNIKVGEIAGERVME---LEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMK 568
AC H +K ++E + P+ + E+ SC G ++ R F M
Sbjct: 616 AACGNHGKLKDSLCLFHEMVEKSGIRPDQ----ITFLEIISSCCHVGDVDEGVRFFRSMT 671
Query: 569 EN 570
E+
Sbjct: 672 ED 673
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 142/354 (40%), Gaps = 38/354 (10%)
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM-GEVGSAIKVFELMTTRDVTV--WN 304
L+R G K+ H++L S + I+G + M G K+F + R ++ WN
Sbjct: 50 LLRQG--KQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWN 107
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
+I N L + L F+ +M G SPD +TF ++ C L + +
Sbjct: 108 SIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSL 167
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+ V++++I Y G I F V D + WN ++ G A G + ++ F
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQG-----------------------RYYFDC 461
MR+ P+ +TF VLS C+ L+D G Y C
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 462 MK----NKYFL---QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
+ +K F + + + C++ + GL++E++ E+ + G+ + +LL
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLI--LTEMYLSCGRREDAKRIFAQ 566
+ N++ + +M + ++L L + Y C A+ IF+Q
Sbjct: 348 PSVSKFENLEYCKQIHCYIMR-HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 101/260 (38%), Gaps = 33/260 (12%)
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH- 399
+L CS+ L G+Q+HA I + + + ++ MYA CG+ F + +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 400 -DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC----SYAGL--- 451
I WNSII +G +AL + +M PD TF ++ AC ++ G+
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 452 --------VDQGRYYFDCMKNKYF---------------LQPRSAHYTCVVDLLGRFGLI 488
+D + + Y LQ + +++ + G +
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLIL 547
D + + +R D I + + +L C I +G ++ G V+ + L
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 548 TEMYLSCGRREDAKRIFAQM 567
MY CGR +DA ++F M
Sbjct: 281 LSMYSKCGRFDDASKLFRMM 300
>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
Length = 888
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 199/617 (32%), Positives = 322/617 (52%), Gaps = 64/617 (10%)
Query: 23 TWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
++ M+R + K G + +A LF+ MPER + +Y T++ LM+ +V+ A E++ +
Sbjct: 150 AYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCS 209
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-----LVIGALVNCQRMDLAESYF 137
V + +MI+G+V N L +AL VFH M L VS N VI A + DLA S
Sbjct: 210 VPFFTAMIAGFVLNELPKDALGVFHEM-LSCGVSPNEITLVSVIKACIGAGEFDLAMSIV 268
Query: 138 ----------KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
K +G R+ ++ +R+G AR++FD+M +DV +W ++ Y
Sbjct: 269 GLAMKSNLLDKNLGVRNS-----LITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYA 323
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETCEKTWNSIIS 246
+ G + A + +M +R+ SW L+ A+S + QM + C + S
Sbjct: 324 ELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSS 383
Query: 247 VL--------------IRNGLVKEAHS--------YLEKY----------------PYSN 268
VL I N +K A S ++ Y P N
Sbjct: 384 VLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKN 443
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
I W ++I GY ++ A ++F+ M R+V WN +I G +N + LK F M
Sbjct: 444 IVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLA 503
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
SG SP TF+SVL C+ L +L++G+ +HA+ IK+ + V A+ MYA+ G++ S
Sbjct: 504 SGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDS 563
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
+ F +P + ++W ++I GLA +G+AE+++ LFE M P++ TF+ +L ACS+
Sbjct: 564 SKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSH 623
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
+GLV+ +YF+ M+ + P++ HYTC+VD+L R G + EA +LL +I +
Sbjct: 624 SGLVEHAMHYFEMMQ-ACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKS---EAN 679
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
W ALL AC I+ N ++GE A +R+ EL+ +N+ Y++L+ MY SCG+ +DA + MK
Sbjct: 680 SWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMK 739
Query: 569 ENGVKKEPGCSWIQIND 585
+KK+ GCSW+QI D
Sbjct: 740 GINLKKDGGCSWVQIRD 756
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 207/475 (43%), Gaps = 82/475 (17%)
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
+GA ++ MV V+ G IV AR+LFD MP + V ++ M+ + G V A +L+
Sbjct: 143 VGAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELY 202
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------P---------ETC------- 237
++ + + +I G V + A+ F +M P + C
Sbjct: 203 RQCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFD 262
Query: 238 ---------------EKTW---NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
+K NS+I++ +R G A ++ ++ SWT ++ Y
Sbjct: 263 LAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVY 322
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
E+G++ A +V + M R+ W ++ + +E + + QM G P+ + F+
Sbjct: 323 AELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFS 382
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
SVL C+ L L GR+IH Q +K+A + VS+A+I MY +C + A + F S+P
Sbjct: 383 SVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQK 442
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
+I+ WNS+I G + + +A ELF++M + + G YA Q R +
Sbjct: 443 NIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISG------YA----QNRQFI 492
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
D +K+ + + A G + ++L AC
Sbjct: 493 DALKS------------------------------FHAMLASGQSPGEITFSSVLLACAS 522
Query: 520 HNNIKVGEIAGERVMELEPNNS-GVYLILTEMYLSCGRREDAKRIFAQM-KENGV 572
++++G++ ++++L S V L++MY G + +KR+F +M K N V
Sbjct: 523 LCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDV 577
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 188/406 (46%), Gaps = 49/406 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R A+ +FD+M RD V+W ++ Y + G L+ A + ++MPER+ ++ T++A
Sbjct: 292 LRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVA 351
Query: 61 GLMQSDNVQGAKEVFDGM---EVRDVVTWNSMISGYVCNGLID-EALRVFHGMPLKDVVS 116
Q N + A ++ M R ++ S + G C L D + R H LK S
Sbjct: 352 RHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLG-ACASLQDLRSGRKIHNQTLKMACS 410
Query: 117 WNL-VIGALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
N+ V AL++ C+++ A+ F + +++ W +++G ++VEA +LF KM
Sbjct: 411 NNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKM 470
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
PA++V +WN +I+GY N +Q I+ L + + A+
Sbjct: 471 PARNVASWNSIISGYAQN---------------------RQFIDALKSFHAMLAS----G 505
Query: 232 QMPETCEKTWNSII---SVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGS 287
Q P E T++S++ + L + K H+ + K +I T + Y + G++ S
Sbjct: 506 QSPG--EITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDS 563
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
+ +VF M R+ W MI GL EN EE + F M +G +P+ TF ++L CS
Sbjct: 564 SKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSH 623
Query: 348 LPTLDLG----RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
++ + A I +T M+ + AR G++ A
Sbjct: 624 SGLVEHAMHYFEMMQACGISPKAKHYT----CMVDVLARAGHLAEA 665
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 140/297 (47%), Gaps = 43/297 (14%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
++ +AQ +F +PQ++ V WN +I GY N + A LF +MP R++ ++N++I+G Q
Sbjct: 428 QLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQ 487
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
+ ++ D ++ ++++M++ G I F + L +L +G +
Sbjct: 488 N------RQFIDALK-----SFHAMLASGQSPGEI-----TFSSVLLACASLCSLEMGKM 531
Query: 125 VNCQ--RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
V+ + ++ + ES F D+ + G + ++++F +MP ++ AW M
Sbjct: 532 VHAKIIKLGIKESIFVGTALSDM---------YAKSGDLDSSKRVFYEMPKRNDVAWTAM 582
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ----LINGLVNSRRIDAAISYFKQMPETC- 237
I G +NG + LF+ M +T +Q ++ +S ++ A+ YF+ M + C
Sbjct: 583 IQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMM-QACG 641
Query: 238 ----EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA-SWTNVIVGY-----FEMGE 284
K + ++ VL R G + EA L K + A SW ++ EMGE
Sbjct: 642 ISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGE 698
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 48/231 (20%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN-GFLD-----NAMCLFNQMPERDMFTY- 55
N+++ EA+ LF KMP R+ +WN +I GY +N F+D +AM Q P F+
Sbjct: 457 NSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSV 516
Query: 56 --------------------------NTVIAGLMQSD------NVQGAKEVFDGMEVRDV 83
++ G SD ++ +K VF M R+
Sbjct: 517 LLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRND 576
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-SWNLVIGALVNCQRMDLAE---SYFKE 139
V W +MI G NG +E++ +F M + + + L C L E YF+
Sbjct: 577 VAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEM 636
Query: 140 MGARDVAS----WTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAG 185
M A ++ +T MV+ L R G + EA L K+ +K + +W +++
Sbjct: 637 MQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSA 687
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMF----TYNT 57
++ + ++ +F +MP+R+ V W MI+G +NGF + ++ LF M + T+
Sbjct: 557 KSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLA 616
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-- 115
++ S V+ A F+ M+ + + Y C ++D R H +D++
Sbjct: 617 ILFACSHSGLVEHAMHYFEMMQACGI---SPKAKHYTC--MVDVLARAGHLAEAEDLLLK 671
Query: 116 --------SWNLVIGAL---VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEA 164
SW ++ A N + + A +E+ + A + ++ N G+ +A
Sbjct: 672 IESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDA 731
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGC--VGVAEDLFQKMH 203
++ M +++ D GC V + ++ QK+
Sbjct: 732 AEMRILMKGINLKK---------DGGCSWVQIRDEQLQKIQ 763
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 183/549 (33%), Positives = 291/549 (53%), Gaps = 41/549 (7%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYF 137
+V +N++ISG++ NG +E + M + D ++ I A ++ +
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIKKIHGLL 162
Query: 138 KEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
+ G DV + +VN ++ G + A+ F+++P +DV WN M+ GY G +
Sbjct: 163 FKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVL 222
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
+ F++M+D + + + G+ +S F M + + NG +
Sbjct: 223 ETFRRMNDESVVPSRFTVTGV---------LSVFAVMGD-------------LNNGRI-- 258
Query: 257 AHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
H + K Y S +A ++I Y + + A+++FE+M +D+ WN ++ + E
Sbjct: 259 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIV-SVHEQCG 317
Query: 316 GEEG-LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ------ 368
+G L+ +M +G PD T T+VL CS L L GR+IH I +
Sbjct: 318 DHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID 377
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
+ NA+I MYA+CG+++ A L F + D+ SWN +I G HGY +ALE+F RM
Sbjct: 378 DVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMC 437
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
KPD++TFVGVLSACS+AG V QGR + MK+KY + P HYTCV+D+LGR G +
Sbjct: 438 EVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQL 497
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
DEA L + IE +P VW ALL ACR+H + + E+A +RV ELEP + G Y++++
Sbjct: 498 DEAYELALTMP---IEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMS 554
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
+Y + GR E+ + M++ V+K PGCSWI++ +G HVF+S D +HP+ H + LN
Sbjct: 555 NVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLN 614
Query: 609 LLHTEIERE 617
L +
Sbjct: 615 SLTARLREH 623
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 11/290 (3%)
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK--EAHSYLEKYPYSNIA-SWTNV 275
N I AI F+Q P S+ + L K E HSY+ + N S T++
Sbjct: 20 NFSSISTAIQSFQQ-PYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSL 78
Query: 276 IVGYFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
I Y + ++ A+ +F T +V +N +I G N EEG +F+ +M+ G PD
Sbjct: 79 INMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPD 138
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
TF + C D+ + ++IH K + +A++ Y + G ++ A + F
Sbjct: 139 KFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFE 195
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+PI D++ WN+++ G A G E LE F RM P T GVLS + G ++
Sbjct: 196 ELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNN 255
Query: 455 GRYYFD-CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
GR MK Y A ++D+ G+ I++A+ + +R I
Sbjct: 256 GRIIHGFAMKMGY--DSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDI 303
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 179/437 (40%), Gaps = 66/437 (15%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGA 71
LF + D + ++ Y K G +++A F ++P RD+ +N ++ G Q +
Sbjct: 162 LFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMV 221
Query: 72 KEVFDGMEVRDVV----TWNSMISGYVCNGLIDEALRVFHGMPLK-----DVVSWNLVIG 122
E F M VV T ++S + G ++ R+ HG +K V N +I
Sbjct: 222 LETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNG-RIIHGFAMKMGYDSGVAVSNSLID 280
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
C+ ++ A F+ M +D+ SW +V+ + G +L D+M +Q +L+
Sbjct: 281 MYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQP-DLV 339
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL-VNSRRIDAAISYFKQMPETCEKTW 241
+ C +A MH R++ + +++GL + + ID +
Sbjct: 340 TVTTVLPACSHLA----ALMHGREIHGY-MIVSGLGKDGKDIDDVL------------LK 382
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N++I + + G +++AH E+ ++ASW
Sbjct: 383 NAVIDMYAKCGSMRDAHLVFERMSNKDVASW----------------------------- 413
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
N+MI G G + G E L+ F +M E PD TF VL+ CS + GR Q
Sbjct: 414 --NIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQ- 470
Query: 362 IKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAE 418
+K + T+ + +I M R G + A ++PI + + W +++ H +A
Sbjct: 471 MKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHA- 529
Query: 419 KALELFERMRLTDFKPD 435
L R+ + +P+
Sbjct: 530 -VLAEVAAQRVFELEPE 545
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 139/337 (41%), Gaps = 38/337 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ AQ F+++P RD V WN M+ GY + G + + F +M + + + G++
Sbjct: 187 MEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSV 246
Query: 66 DNVQG---AKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
V G + G ++ V NS+I Y I++AL +F M KD+ SW
Sbjct: 247 FAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSW 306
Query: 118 NLVIGALVNCQRMDLAESYFKEM-GA---RDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
N ++ C D M GA D+ + T ++ ++ R++ M
Sbjct: 307 NSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIV 366
Query: 174 K----------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
DV N +I Y G + A +F++M ++D+ SW +I G
Sbjct: 367 SGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYG 426
Query: 224 DAAISYFKQMPETC----EKTWNSIISVLIRNGLVKEAHSYL----EKYPYS-NIASWTN 274
+ A+ F +M E E T+ ++S G V + ++L KY + I +T
Sbjct: 427 NEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTC 486
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDV----TVWNVMI 307
VI +G G + +EL T + VW ++
Sbjct: 487 VID---MLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 17/191 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNT 57
+ +++A +F++M +D +WN+MI GY +G+ + A+ +F++M E D T+
Sbjct: 391 KCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVG 450
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
V++ + V + M+ + V I Y C G +DEA + MP
Sbjct: 451 VLSACSHAGFVSQGRNFLVQMKSKYDVA--PTIEHYTCVIDMLGRAGQLDEAYELALTMP 508
Query: 111 LK-DVVSWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGRIVEARK 166
++ + V W ++ A + LAE + E+ S+ +M N GR E +
Sbjct: 509 IEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLE 568
Query: 167 LFDKMPAKDVQ 177
+ M ++V+
Sbjct: 569 VRHTMRQQNVR 579
>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 748
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 202/658 (30%), Positives = 311/658 (47%), Gaps = 83/658 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN-------- 56
A+ LFD+MP+R+ +++N +I GY + GF + AM LF + E D FTY
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 57 -------------TVIAGLMQS--------------DNVQGAKEVFDGMEVRDVVTWNSM 89
V+ GL Q + A +FD + RD V+WNS+
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSL 220
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAES----------YFKE 139
ISGYV G +E L + M + +G+++ ++L E Y +
Sbjct: 221 ISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAK 280
Query: 140 MGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD-----NGCVG 193
+G D+ T +++ + G + EA KLF MP+K+V +N MI+G+L +
Sbjct: 281 LGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASS 340
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE-TCEKTWNSIISVLIRNG 252
A LF M R L + ++ + + Y +Q+ C+ + S I +
Sbjct: 341 EAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQS--DEFIGSA 398
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
L++ Y MG ++ F + +D+ W MI +
Sbjct: 399 LIEL----------------------YALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQ 436
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N+ E F Q+ S P+ T + +++ C+D L G QI AIK + FT+V
Sbjct: 437 NEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSV 496
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+ I+MYA+ GN+ A F V D+ +++++I LA HG A +AL +FE M+
Sbjct: 497 KTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGI 556
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
KP+ F+GVL AC + GLV QG YF CMKN Y + P H+TC+VDLLGR G + +A
Sbjct: 557 KPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAE 616
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
NL I + G + P W ALL +CR++ + +G+ ER+MELEP SG Y++L +Y
Sbjct: 617 NL---ILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYN 673
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
G A+ + M++ GVKKEP SWI I + H F D SHP + +L +
Sbjct: 674 DSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 167/377 (44%), Gaps = 34/377 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ ++ +A +LFD+ +RD V+WN +I GY + G + + L +M RD T G
Sbjct: 195 KCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKM-HRDGLNLTTYALG 253
Query: 62 LMQSDNVQGAKEVF--DGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGM 109
+ E F GM + D+V +++ Y NG + EA+++F M
Sbjct: 254 SVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLM 313
Query: 110 PLKDVVSWNLVIGALVNCQRM-DLAES----YFKEMGARDV----ASWTIMVNGLVREGR 160
P K+VV++N +I + + D A S F +M R + +++++++
Sbjct: 314 PSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKT 373
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLD-NGCVGVAED---LFQKMHDRDLTSWKQLING 216
+ R++ + + Q+ + + ++ +G ED F +D+ SW +I+
Sbjct: 374 LEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDC 433
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYP----YSNIASW 272
V + ++++A F+Q+ + + +S+++ A S E+ S I ++
Sbjct: 434 HVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAF 493
Query: 273 TNV----IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
T+V I Y + G + A +VF + DV ++ MI L ++ E L F MK
Sbjct: 494 TSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKT 553
Query: 329 SGPSPDNATFTSVLTIC 345
G P+ F VL C
Sbjct: 554 HGIKPNQQAFLGVLIAC 570
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 140/347 (40%), Gaps = 46/347 (13%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + E+G A ++F+ M R++ +N +I G + E+ ++ F++ +E+ D T+
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
L C + LDLG +H + +Q + N +I MY++CG + A+ F
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY---AGLVDQG 455
D +SWNS+I G G AE+ L L +M VL AC G +++G
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN------------------- 496
C K ++ T ++D+ + G + EA+ L +
Sbjct: 272 -MAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 497 -----------------EIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEP 538
+++ G+E SP+ + +L AC ++ G +I
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
++ + L E+Y G ED + FA K+ SW + D
Sbjct: 391 SDEFIGSALIELYALMGSTEDGMQCFA-----STSKQDIASWTSMID 432
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 103/261 (39%), Gaps = 48/261 (18%)
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
LG+ H IK + N + N ++ MY +C + A F +P +IIS+NS+I G
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSAC-------------------------- 446
G+ E+A+ELF R + K D T+ G L C
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVF 184
Query: 447 ---------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
S G +DQ FD + + ++ R G +E +NLL +
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCDER-----DQVSWNSLISGYVRVGAAEEPLNLLAK 239
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG------VYLILTEMY 551
+ DG+ ++ G++L AC I N+ G I + G V L +MY
Sbjct: 240 MHRDGLNLTTYALGSVLKACCI--NLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMY 297
Query: 552 LSCGRREDAKRIFAQMKENGV 572
G ++A ++F+ M V
Sbjct: 298 AKNGSLKEAIKLFSLMPSKNV 318
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 126/288 (43%), Gaps = 29/288 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDN-----AMCLFNQMPERDMFTYN 56
+N ++EA LF MP ++ VT+N MI G+ + + + A LF M R +
Sbjct: 299 KNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSP 358
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVTWN----------SMISGYVCNGLIDEALRVF 106
+ + ++++ AK + G ++ ++ N ++I Y G ++ ++ F
Sbjct: 359 STFSVVLKA--CSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCF 416
Query: 107 HGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIV 162
+D+ SW +I V ++++ A F+++ + + + ++M++ +
Sbjct: 417 ASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALS 476
Query: 163 EARKLFDKMPAKDVQAWNLM----IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
++ + A+ + I+ Y +G + +A +F ++ + D+ ++ +I+ L
Sbjct: 477 SGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLA 536
Query: 219 NSRRIDAAISYFKQMP-ETCEKTWNSIISVLI---RNGLVKEAHSYLE 262
+ A++ F+ M + + + VLI GLV + Y +
Sbjct: 537 QHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQ 584
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 161/438 (36%), Positives = 263/438 (60%), Gaps = 14/438 (3%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N++I Y+ G + A+D+F KM DR++ SW +I+ ++ D A+ + M +
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 240 ----TWNSIISVLIRNGL--VKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVF 292
T++S++ +GL +++ H + K S++ + +I Y GE+ +A++VF
Sbjct: 64 PNMFTYSSVLRAC--DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVF 121
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ M T D+ VW+ +I G +N G+E L+ F +MK +G T TSVL C+ L L+
Sbjct: 122 DEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLE 181
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
LGRQ+H +K +Q ++NA++ MY +CG+++ A F + D+ISW+++I GLA
Sbjct: 182 LGRQVHVHVLKY--DQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLA 239
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
+GY+++AL+LFE M++ KP+ +T VGVL ACS+AGLV++G YYF MK + + P
Sbjct: 240 QNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGR 299
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
HY C++DLLGR G + EA++L+NE+ E W ALL ACR+H N+ V A ++
Sbjct: 300 EHYGCMIDLLGRAGRLSEAVDLINEMEC---EPDAVTWRALLNACRVHRNVDVAIHAAKQ 356
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLS 592
++ L+P ++G Y++L+ +Y + R D + M G+KKEPGCSWI+++ H F+
Sbjct: 357 ILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFIL 416
Query: 593 GDSSHPKFHRLRYLLNLL 610
GD SHP+ + LN L
Sbjct: 417 GDRSHPQIREINIQLNQL 434
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 163/394 (41%), Gaps = 40/394 (10%)
Query: 53 FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
F N +I ++ + A++VFD M R+VV+W +MIS Y L D+AL F + L+
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALE-FLVLMLR 59
Query: 113 DVVSWNLVI--GALVNCQRM----DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARK 166
+ V N+ L C + L K DV + +++ R G + A +
Sbjct: 60 EGVRPNMFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALR 119
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+FD+M D+ W+ +IAG+ N A LF++M + + + ++ R
Sbjct: 120 VFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVL---RACTG 176
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVG 286
++ + L ++ H ++ KY I + ++ Y + G +
Sbjct: 177 LALLE---------------------LGRQVHVHVLKYDQDLILN-NALLDMYCKCGSLE 214
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A VF M +DV W+ MI GL +N +E LK F MK G P+ T VL CS
Sbjct: 215 DANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACS 274
Query: 347 DLPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA---LLEFSSVPIHDII 402
++ G H+ + MI + R G + A + E P D +
Sbjct: 275 HAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEP--DAV 332
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+W +++ H + A+ +++ D P D
Sbjct: 333 TWRALLNACRVHRNVDVAIHAAKQILRLD--PQD 364
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 128/342 (37%), Gaps = 114/342 (33%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAM----CLFNQMPERDMFTYNTVIAG 61
+ +AQ++FDKMP R+ V+W MI Y D A+ + + +MFTY++V+
Sbjct: 16 LHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRA 75
Query: 62 L-----------------MQSD---------------NVQGAKEVFDGMEVRDVVTWNSM 89
+ SD ++ A VFD M D+V W+S+
Sbjct: 76 CDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSI 135
Query: 90 ISGYVCNGLIDEALRVFH----------------------GMPL---------------K 112
I+G+ N DEALR+F G+ L +
Sbjct: 136 IAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYDQ 195
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
D++ N ++ C ++ A + F M +DV SW+ M+ GL + G EA KLF+ M
Sbjct: 196 DLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMK 255
Query: 173 AKDVQAWNLMIAGYL------------------------------DNGC----------V 192
++ + I G L GC +
Sbjct: 256 VLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRL 315
Query: 193 GVAEDLFQKMH-DRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
A DL +M + D +W+ L+N R +D AI KQ+
Sbjct: 316 SEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQI 357
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++A +F +M ++D ++W+ MI G +NG+ A+ LF M + I G++ +
Sbjct: 213 LEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFA 272
Query: 66 DNVQG-----------AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-D 113
+ G KE+F R+ + MI G + EA+ + + M + D
Sbjct: 273 CSHAGLVEEGLYYFHSMKELFGIDPGRE--HYGCMIDLLGRAGRLSEAVDLINEMECEPD 330
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKE---MGARDVASWTIMVN 153
V+W ++ A + +D+A K+ + +D ++ ++ N
Sbjct: 331 AVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSN 373
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 192/564 (34%), Positives = 292/564 (51%), Gaps = 39/564 (6%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
E + + + I + ++ A+ VFD + TWN+M GY + + +F
Sbjct: 51 EGNDYVTPSFITACARLGGIRRARRVFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFAR 110
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
M GA NC + M + A+ G E V A++ F
Sbjct: 111 MHRA---------GASPNC--------FTFPMVVKSCATANAAKEG--EEVHCVVAKRGF 151
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAE--DLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ +I Y G V VA+ +F +M D+++ +W ++ V R + +A
Sbjct: 152 KS----NTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVFAWTAIVAAHVACRDMVSA 207
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVG 286
F P+ WN ++S I G + A ++ P ++ SW V+ GY GEV
Sbjct: 208 RRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRMPDRDVMSWNTVLSGYATNGEVE 267
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM--------KESGPS---PDN 335
S +K+FE M R+V WN +I G N L +E L+ F +M KE P++
Sbjct: 268 SFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPND 327
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
T +VLT CS L L++G+ +H A I V NA+I MYA+CG I+ AL F
Sbjct: 328 YTVVAVLTACSRLGDLEMGKWVHVYAESIGYKGNLFVGNALIDMYAKCGVIEKALDVFDG 387
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+ + DII+WN+II GLA HG+ AL LFERM+ +PD +TFVG+LSAC++ GLV G
Sbjct: 388 LDVKDIITWNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFVGILSACTHMGLVRNG 447
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
+F M + Y + P+ HY C+VDLLGR GLID+A+++ +R +E +W ALLG
Sbjct: 448 LLHFQSMVDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDI---VRKMPMEPDAVIWAALLG 504
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
ACR++ N+++ E+A +R++ELEPNN G +++++ +Y GR +D R+ M++ G +K
Sbjct: 505 ACRMYKNVEMAELALQRLIELEPNNPGNFVMVSNIYKDLGRSQDVARLKVAMRDTGFRKV 564
Query: 576 PGCSWIQINDGGHVFLSGDSSHPK 599
PGCS I ND F S D HP+
Sbjct: 565 PGCSVIGCNDSMVEFYSLDERHPE 588
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 216/474 (45%), Gaps = 62/474 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
R I+ A+ +FDK Q + TWN M RGY + + + LF +M + FT+
Sbjct: 66 RLGGIRRARRVFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASPNCFTFPM 125
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNG--LIDEALRVFHGMPL 111
V+ ++ + +EV + R + ++I Y G + +A +VF M
Sbjct: 126 VVKSCATANAAKEGEEVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRD 185
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
K+V +W ++ A V C+ M A F RDV W ++V+G + G +V AR+LFD+M
Sbjct: 186 KNVFAWTAIVAAHVACRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRM 245
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
P +DV +WN +++GY NG V LF++M R++ SW LI G V + A+ FK
Sbjct: 246 PDRDVMSWNTVLSGYATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFK 305
Query: 232 QMPETCEK---------------TWNSIISVLIRNG---LVKEAHSYLEKYPYS-NIASW 272
+M E T ++++ R G + K H Y E Y N+
Sbjct: 306 RMLVLVEGEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGKWVHVYAESIGYKGNLFVG 365
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+I Y + G + A+ VF+ + +D+ WN +I GL + + L F +MK +G
Sbjct: 366 NALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINGLAMHGHVADALSLFERMKRAGER 425
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD TF +L+ C+ + V N ++ + QS + +
Sbjct: 426 PDGVTFVGILSACTHM---------------------GLVRNGLL-------HFQSMVDD 457
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
+S VP I + ++ L G +KA+++ +M + +PD + + +L AC
Sbjct: 458 YSIVP--QIEHYGCMVDLLGRAGLIDKAVDIVRKMPM---EPDAVIWAALLGAC 506
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 94/241 (39%), Gaps = 21/241 (8%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F S+L C L QI AQ + V+ + IT AR G I+ A F
Sbjct: 25 FISLLRTCGTCVRL---HQIQAQIVTHGLEGNDYVTPSFITACARLGGIRRARRVFDKTA 81
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ +WN++ G A + LF RM P+ TF V+ +C+ A +G
Sbjct: 82 QPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASPNCFTFPMVVKSCATANAAKEGE- 140
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFG--LIDEAMNLLNEIRADGIEVSPTVWGALLG 515
C+ K + + ++ + G + +A + E+R + W A++
Sbjct: 141 EVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNV----FAWTAIVA 196
Query: 516 ---ACRIHNNIKVGEIAGERVMELEPNNSGV-YLILTEMYLSCGRREDAKRIFAQMKENG 571
ACR ++ R+ +L P V + ++ Y+ G A+ +F +M +
Sbjct: 197 AHVACR-------DMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRMPDRD 249
Query: 572 V 572
V
Sbjct: 250 V 250
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 149/419 (35%), Positives = 243/419 (57%), Gaps = 3/419 (0%)
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
LF+ M +RD+ SW +I GL+ + A F +MP +WN+I+ ++ G + +A
Sbjct: 3 LFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNKA 62
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
E P N+ SW+ ++ GY + G++ A +F+ M +++ W +++ G L +
Sbjct: 63 FGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAK 122
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
+ ++ F QM+E+G PD+ T S+L C++ L LG+++H +I VSNA++
Sbjct: 123 DAIRSFEQMEEAGLKPDDGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALV 182
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
MYA+CG + AL F+ + D++SWN ++ GLA HG+ EKAL+LF MR F+PD +
Sbjct: 183 DMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKV 242
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
T V VL AC +AG VD+G YF+ M+ Y + P HY C+VDLLGR G + EA L+
Sbjct: 243 TLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQS 302
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
+ +E + +WG LLGACR+HN + + E + + +LEP++ G Y +L+ ++ S G
Sbjct: 303 MP---VEPNVVIWGTLLGACRMHNAVGLAEEVLDCLFKLEPSDPGNYSLLSNIFASAGDW 359
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+ QMK G++K G S I+++D H F D SHPK ++ ++N L +++R
Sbjct: 360 SSVANVRLQMKNFGIQKPSGASSIEVDDEVHEFTVFDKSHPKSDKIYQMINRLGLDLKR 418
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 180/371 (48%), Gaps = 44/371 (11%)
Query: 74 VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLA 133
+F M+ RDVV+WNSMI G + G + EA ++F MP+KD VSWN ++ V M+ A
Sbjct: 3 LFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNKA 62
Query: 134 ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
F+ M R+V SW+ MV+G + G + AR LFD+MP K++ +W ++++GY G
Sbjct: 63 FGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGY---AVKG 119
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN-SIISVLIRN- 251
+A+D AI F+QM E K + ++IS+L
Sbjct: 120 LAKD----------------------------AIRSFEQMEEAGLKPDDGTVISILASCA 151
Query: 252 -----GLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNV 305
GL K H+ +E+ Y + +N +V Y + G+V A+ VF M+ +D+ WN
Sbjct: 152 ESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLVSWNC 211
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG-RQIHAQAIKI 364
M+ GL + GE+ L+ F M++ G PD T +VL C +D G R +
Sbjct: 212 MLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGFVDEGIRYFNNMERDY 271
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYH---GYAEKA 420
M+ + R G ++ A S+P+ +++ W +++ H G AE+
Sbjct: 272 GIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGACRMHNAVGLAEEV 331
Query: 421 LELFERMRLTD 431
L+ ++ +D
Sbjct: 332 LDCLFKLEPSD 342
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 155/318 (48%), Gaps = 28/318 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ + EA LFD+MP +D V+WN ++ GY K G ++ A LF MPER++ +++T+++
Sbjct: 23 LKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNKAFGLFESMPERNVVSWSTMVS 82
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-L 119
G ++ +++ A+ +FD M V+++V+W ++SGY GL +A+R F M + +
Sbjct: 83 GYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGT 142
Query: 120 VIGALVNCQRMDLAESYFKEMGAR------------DVASWTIMVNGLVREGRIVEARKL 167
VI L +C AES +G R V +V+ + G++ A +
Sbjct: 143 VISILASC-----AESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSV 197
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRI 223
F+ M KD+ +WN M+ G +G A LF M D + ++ V++ +
Sbjct: 198 FNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGFV 257
Query: 224 DAAISYFKQMPETCE-----KTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIV 277
D I YF M + + ++ +L R G +KEA+ ++ P N+ W ++
Sbjct: 258 DEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLG 317
Query: 278 GYFEMGEVGSAIKVFELM 295
VG A +V + +
Sbjct: 318 ACRMHNAVGLAEEVLDCL 335
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 122/250 (48%), Gaps = 24/250 (9%)
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+++F++M RDV WN MI GL + E K F +M P D ++ ++L
Sbjct: 1 MRLFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEM----PMKDAVSWNTILD----- 51
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
+ G A + + + VS + M++ Y + G+++ A + F +P+ +++SW I
Sbjct: 52 GYVKAGEMNKAFGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTII 111
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNKY 466
+ G A G A+ A+ FE+M KPDD T + +L++C+ +GL+ G R + + +Y
Sbjct: 112 VSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTVISILASCAESGLLGLGKRVHTSIERIRY 171
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
++ +VD+ + G +D A+++ N + + W +L +H +
Sbjct: 172 KCSVNVSN--ALVDMYAKCGQVDRALSVFNGMSKKDL----VSWNCMLQGLAMHGH---- 221
Query: 527 EIAGERVMEL 536
GE+ ++L
Sbjct: 222 ---GEKALQL 228
>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
Length = 950
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 199/617 (32%), Positives = 321/617 (52%), Gaps = 64/617 (10%)
Query: 23 TWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
++ M+R + K G + +A LF+ MPER + +Y T++ LM+ +V+ A E++ +
Sbjct: 150 AYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCS 209
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-----LVIGALVNCQRMDLAESYF 137
V + +MI+G+V N L +AL VFH M L VS N VI A + DLA S
Sbjct: 210 VPFFTAMIAGFVLNELPKDALGVFHEM-LSCGVSPNEITLVSVIKACIGAGEFDLAMSIV 268
Query: 138 ----------KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
K +G R+ ++ +R+G AR++FD+M +DV +W ++ Y
Sbjct: 269 GLAMKSNLLDKNLGVRNS-----LITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYA 323
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETCEKTWNSIIS 246
+ G + A + +M +R+ SW L+ A+S + QM + C + S
Sbjct: 324 ELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSS 383
Query: 247 VL--------------IRNGLVKEAHS--------YLEKY----------------PYSN 268
VL I N +K A S ++ Y P N
Sbjct: 384 VLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKN 443
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
I W ++I GY ++ A ++F+ M R+V WN +I G +N + LK F M
Sbjct: 444 IVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLA 503
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
SG SP TF+SVL C+ L +L++G+ +HA+ IK+ + V A+ MYA+ G++ S
Sbjct: 504 SGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDS 563
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
+ F +P + ++W ++I GLA +G+AE+++ LFE M P++ TF+ +L ACS+
Sbjct: 564 SKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSH 623
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
+GLV+ +YF+ M + P++ HYTC+VD+L R G + EA +LL +I +
Sbjct: 624 SGLVEHAMHYFE-MMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKS---EAN 679
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
W ALL AC I+ N ++GE A +R+ EL+ +N+ Y++L+ MY SCG+ +DA + MK
Sbjct: 680 SWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMK 739
Query: 569 ENGVKKEPGCSWIQIND 585
+KK+ GCSW+QI D
Sbjct: 740 GINLKKDGGCSWVQIRD 756
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 207/475 (43%), Gaps = 82/475 (17%)
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
+GA ++ MV V+ G IV AR+LFD MP + V ++ M+ + G V A +L+
Sbjct: 143 VGAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELY 202
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------P---------ETC------- 237
++ + + +I G V + A+ F +M P + C
Sbjct: 203 RQCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFD 262
Query: 238 ---------------EKTW---NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
+K NS+I++ +R G A ++ ++ SWT ++ Y
Sbjct: 263 LAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVY 322
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
E+G++ A +V + M R+ W ++ + +E + + QM G P+ + F+
Sbjct: 323 AELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFS 382
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
SVL C+ L L GR+IH Q +K+A + VS+A+I MY +C + A + F S+P
Sbjct: 383 SVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQK 442
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
+I+ WNS+I G + + +A ELF++M + + G YA Q R +
Sbjct: 443 NIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISG------YA----QNRQFI 492
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
D +K+ + + A G + ++L AC
Sbjct: 493 DALKS------------------------------FHAMLASGQSPGEITFSSVLLACAS 522
Query: 520 HNNIKVGEIAGERVMELEPNNS-GVYLILTEMYLSCGRREDAKRIFAQM-KENGV 572
++++G++ ++++L S V L++MY G + +KR+F +M K N V
Sbjct: 523 LCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDV 577
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 188/406 (46%), Gaps = 49/406 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R A+ +FD+M RD V+W ++ Y + G L+ A + ++MPER+ ++ T++A
Sbjct: 292 LRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVA 351
Query: 61 GLMQSDNVQGAKEVFDGM---EVRDVVTWNSMISGYVCNGLID-EALRVFHGMPLKDVVS 116
Q N + A ++ M R ++ S + G C L D + R H LK S
Sbjct: 352 RHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLG-ACASLQDLRSGRKIHNQTLKMACS 410
Query: 117 WNLVI-GALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
N+ + AL++ C+++ A+ F + +++ W +++G ++VEA +LF KM
Sbjct: 411 NNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKM 470
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
PA++V +WN +I+GY N +Q I+ L + + A+
Sbjct: 471 PARNVASWNSIISGYAQN---------------------RQFIDALKSFHAMLAS----G 505
Query: 232 QMPETCEKTWNSII---SVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGS 287
Q P E T++S++ + L + K H+ + K +I T + Y + G++ S
Sbjct: 506 QSPG--EITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDS 563
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
+ +VF M R+ W MI GL EN EE + F M +G +P+ TF ++L CS
Sbjct: 564 SKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSH 623
Query: 348 LPTLDLG----RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
++ + A I +T M+ + AR G++ A
Sbjct: 624 SGLVEHAMHYFEMMQACGISPKAKHYT----CMVDVLARAGHLAEA 665
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 141/297 (47%), Gaps = 43/297 (14%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
++ +AQ +F +PQ++ V WN +I GY N + A LF +MP R++ ++N++I+G Q
Sbjct: 428 QLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQ 487
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
+ ++ D ++ ++++M++ G I F + L +L +G +
Sbjct: 488 N------RQFIDALK-----SFHAMLASGQSPGEI-----TFSSVLLACASLCSLEMGKM 531
Query: 125 VNCQ--RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
V+ + ++ + ES F D+ + + G + ++++F +MP ++ AW M
Sbjct: 532 VHAKIIKLGIKESIFVGTALSDMYA---------KSGDLDSSKRVFYEMPKRNDVAWTAM 582
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ----LINGLVNSRRIDAAISYFKQMPETC- 237
I G +NG + LF+ M +T +Q ++ +S ++ A+ YF+ M + C
Sbjct: 583 IQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMM-QACG 641
Query: 238 ----EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA-SWTNVIVGY-----FEMGE 284
K + ++ VL R G + EA L K + A SW ++ EMGE
Sbjct: 642 ISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGE 698
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 48/231 (20%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN-GFLD-----NAMCLFNQMPERDMFTY- 55
N+++ EA+ LF KMP R+ +WN +I GY +N F+D +AM Q P F+
Sbjct: 457 NSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSV 516
Query: 56 --------------------------NTVIAGLMQSD------NVQGAKEVFDGMEVRDV 83
++ G SD ++ +K VF M R+
Sbjct: 517 LLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRND 576
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-SWNLVIGALVNCQRMDLAE---SYFKE 139
V W +MI G NG +E++ +F M + + + L C L E YF+
Sbjct: 577 VAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEM 636
Query: 140 MGARDVAS----WTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAG 185
M A ++ +T MV+ L R G + EA L K+ +K + +W +++
Sbjct: 637 MQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSA 687
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMF----TYNT 57
++ + ++ +F +MP+R+ V W MI+G +NGF + ++ LF M + T+
Sbjct: 557 KSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLA 616
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-- 115
++ S V+ A F+ M+ + + Y C ++D R H +D++
Sbjct: 617 ILFACSHSGLVEHAMHYFEMMQACGI---SPKAKHYTC--MVDVLARAGHLAEAEDLLLK 671
Query: 116 --------SWNLVIGAL---VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEA 164
SW ++ A N + + A +E+ + A + ++ N G+ +A
Sbjct: 672 IESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDA 731
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGC--VGVAEDLFQKMH 203
++ M +++ D GC V + ++ QK+
Sbjct: 732 AEMRILMKGINLKK---------DGGCSWVQIRDEQLQKIQ 763
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 183/611 (29%), Positives = 322/611 (52%), Gaps = 60/611 (9%)
Query: 12 LFDKMPQR-DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQG 70
+F+ +P T+ W +IR Y +G +++ F QM + + V +++S +
Sbjct: 61 IFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLM- 119
Query: 71 AKEVFDGMEVRDVVTWNSM-ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI--GALVNC 127
K++ G V + M Y CN L++ + + L++V ++ V G +
Sbjct: 120 -KDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFW---SLEEVNTYKKVFDEGKTSDV 175
Query: 128 QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
ESY+ + RK+F+ MP +D+ +WN +I+G
Sbjct: 176 YSKKEKESYY-----------------------LGSLRKVFEMMPKRDIVSWNTVISGNA 212
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
NG A + ++M + DL +S + + + F + V
Sbjct: 213 QNGMHEDALMMVREMGNADLRP---------DSFTLSSVLPIFAEY-------------V 250
Query: 248 LIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVM 306
+ G KE H Y + Y +++ +++I Y + V + +VF ++ D WN +
Sbjct: 251 NLLKG--KEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 308
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
I G +N + +EGLKFF QM + P++ +F+S++ C+ L TL LG+Q+H I+
Sbjct: 309 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF 368
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+ +++A++ MYA+CGNI++A F + ++D++SW ++I G A HG+A A+ LF+R
Sbjct: 369 DGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKR 428
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
M + KP+ + F+ VL+ACS+AGLVD+ YF+ M Y + P HY V DLLGR G
Sbjct: 429 MEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVG 488
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
++EA ++++ IE + +VW LL ACR+H NI++ E +++ ++P N G Y++
Sbjct: 489 RLEEAYEFISDMH---IEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVL 545
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYL 606
L+ +Y + GR +DA+++ M++ G+KK+P CSWI+I + H F++GD SHP + R+
Sbjct: 546 LSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEA 605
Query: 607 LNLLHTEIERE 617
L +L ++ERE
Sbjct: 606 LKVLLEQMERE 616
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 146/331 (44%), Gaps = 40/331 (12%)
Query: 10 QNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLMQS 65
+ +F+ MP+RD V+WN +I G +NG ++A+ + +M D+ FT ++V+ +
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 249
Query: 66 DNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
N+ KE+ G +R DV +S+I Y +D++ RVF+ +P D +SWN +
Sbjct: 250 VNLLKGKEI-HGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 308
Query: 121 IGALVNCQRMDLAESYFKEMGARDV--------------ASWTIMVNGLVREGRIVEARK 166
I V D +F++M + A T + G G I+ +R
Sbjct: 309 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSR- 367
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
FD +V + ++ Y G + A +F KM D+ SW +I G A
Sbjct: 368 -FD----GNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDA 422
Query: 227 ISYFKQMP-ETCEKTWNSIISVLI---RNGLVKEAHSYLEKYP--YSNIASWTNVIVGYF 280
IS FK+M E + + + ++VL GLV EA Y Y I +
Sbjct: 423 ISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVAD 482
Query: 281 EMGEVGSAIKVFELMTTRDV----TVWNVMI 307
+G VG + +E ++ + +VW+ ++
Sbjct: 483 LLGRVGRLEEAYEFISDMHIEPTGSVWSTLL 513
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 146/375 (38%), Gaps = 61/375 (16%)
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV-WNVMIFGLGEN 313
K+ H+ + + + + + ++ Y + + ++ +F + + T+ W +I +
Sbjct: 25 KQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSH 84
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
L L FF+QM SG PD+ F SVL C+ + L G +H I++
Sbjct: 85 GLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTC 144
Query: 374 NAMITMYARCGNIQ-----------------------------SALLEFSSVPIHDIISW 404
NA++ MY++ +++ S F +P DI+SW
Sbjct: 145 NALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSW 204
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA-CSYAGLVDQGRYYFDCMK 463
N++I G A +G E AL + M D +PD T VL Y L+ + ++
Sbjct: 205 NTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIR 264
Query: 464 NKY---------------------------FLQPR--SAHYTCVVDLLGRFGLIDEAMNL 494
N Y ++ P+ + ++ + G+ DE +
Sbjct: 265 NGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKF 324
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLS 553
++ I+ + + +++ AC + +G ++ G + N + L +MY
Sbjct: 325 FQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAK 384
Query: 554 CGRREDAKRIFAQMK 568
CG A+ IF +M+
Sbjct: 385 CGNIRTARWIFDKME 399
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 107/252 (42%), Gaps = 49/252 (19%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PE-------- 49
R+ ++ +F +PQ D ++WN +I G +NG D + F QM P
Sbjct: 285 TRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIM 344
Query: 50 --------------------RDMFTYNTVIAGLM-----QSDNVQGAKEVFDGMEVRDVV 84
R F N IA + + N++ A+ +FD ME+ D+V
Sbjct: 345 PACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMV 404
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEM 140
+W +MI GY +G +A+ +F M ++ V V++ V+ A + +D A YF M
Sbjct: 405 SWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSM 464
Query: 141 GA-----RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV-QAWNLMIAGYLDNGCVGV 194
+ + + + L R GR+ EA + M + W+ ++A + + +
Sbjct: 465 TQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIEL 524
Query: 195 AEDLFQKMHDRD 206
AE + +K+ D
Sbjct: 525 AEKVSKKLFTVD 536
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 115/302 (38%), Gaps = 67/302 (22%)
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP-IHDIISW 404
S + + +Q+HAQ ++ + + +S ++++Y+ + +LL F+S+P ++W
Sbjct: 16 SSVKSKSQAKQLHAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLPSPPTTLAW 74
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC------------------ 446
SII HG +L F +M + PD F VL +C
Sbjct: 75 KSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIR 134
Query: 447 ---------------------------SYAGLVDQGR------------YYFDCMKNKYF 467
+Y + D+G+ YY ++ +
Sbjct: 135 LGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFE 194
Query: 468 LQPRS--AHYTCVVDLLGRFGLIDEAMNLLNEI-RADGIEVSPTVWGALLGACRIHNNIK 524
+ P+ + V+ + G+ ++A+ ++ E+ AD S T+ L N +K
Sbjct: 195 MMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLK 254
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIN 584
EI G + + + L +MY C R +D+ R+F + ++ G SW I
Sbjct: 255 GKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHD-----GISWNSII 309
Query: 585 DG 586
G
Sbjct: 310 AG 311
>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
Length = 950
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 199/617 (32%), Positives = 321/617 (52%), Gaps = 64/617 (10%)
Query: 23 TWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
++ M+R + K G + +A LF+ MPER + +Y T++ LM+ +V+ A E++ +
Sbjct: 150 AYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCS 209
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-----LVIGALVNCQRMDLAESYF 137
V + +MI+G+V N L +AL VFH M L VS N VI A + DLA S
Sbjct: 210 VPFFTAMIAGFVLNELPKDALGVFHEM-LSCGVSPNEITLVSVIKACIGAGEFDLAMSIV 268
Query: 138 ----------KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
K +G R+ ++ +R+G AR++FD+M +DV +W ++ Y
Sbjct: 269 GLAMKSNLLDKNLGVRNS-----LITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYA 323
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETCEKTWNSIIS 246
+ G + A + +M +R+ SW L+ A+S + QM + C + S
Sbjct: 324 ELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSS 383
Query: 247 VL--------------IRNGLVKEAHS--------YLEKY----------------PYSN 268
VL I N +K A S ++ Y P N
Sbjct: 384 VLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKN 443
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
I W ++I GY ++ A ++F+ M R+V WN +I G +N + LK F M
Sbjct: 444 IVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLA 503
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
SG SP TF+SVL C+ L +L++G+ +HA+ IK+ + V A+ MYA+ G++ S
Sbjct: 504 SGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDS 563
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
+ F +P + ++W ++I GLA +G+AE+++ LFE M P++ TF+ +L ACS+
Sbjct: 564 SKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSH 623
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
+GLV+ +YF+ M + P++ HYTC+VD+L R G + EA +LL +I +
Sbjct: 624 SGLVEHAMHYFE-MMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKS---EAN 679
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
W ALL AC I+ N ++GE A +R+ EL+ +N+ Y++L+ MY SCG+ +DA + MK
Sbjct: 680 SWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMK 739
Query: 569 ENGVKKEPGCSWIQIND 585
+KK+ GCSW+QI D
Sbjct: 740 GINLKKDGGCSWVQIRD 756
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 207/475 (43%), Gaps = 82/475 (17%)
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
+GA ++ MV V+ G IV AR+LFD MP + V ++ M+ + G V A +L+
Sbjct: 143 VGAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELY 202
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------P---------ETC------- 237
++ + + +I G V + A+ F +M P + C
Sbjct: 203 RQCPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFD 262
Query: 238 ---------------EKTW---NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
+K NS+I++ +R G A ++ ++ SWT ++ Y
Sbjct: 263 LAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVY 322
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
E+G++ A +V + M R+ W ++ + +E + + QM G P+ + F+
Sbjct: 323 AELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFS 382
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
SVL C+ L L GR+IH Q +K+A + VS+A+I MY +C + A + F S+P
Sbjct: 383 SVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQK 442
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
+I+ WNS+I G + + +A ELF++M + + G YA Q R +
Sbjct: 443 NIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISG------YA----QNRQFI 492
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
D +K+ + + A G + ++L AC
Sbjct: 493 DALKS------------------------------FHAMLASGQSPGEITFSSVLLACAS 522
Query: 520 HNNIKVGEIAGERVMELEPNNS-GVYLILTEMYLSCGRREDAKRIFAQM-KENGV 572
++++G++ ++++L S V L++MY G + +KR+F +M K N V
Sbjct: 523 LCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDV 577
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 188/406 (46%), Gaps = 49/406 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R A+ +FD+M RD V+W ++ Y + G L+ A + ++MPER+ ++ T++A
Sbjct: 292 LRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVA 351
Query: 61 GLMQSDNVQGAKEVFDGM---EVRDVVTWNSMISGYVCNGLID-EALRVFHGMPLKDVVS 116
Q N + A ++ M R ++ S + G C L D + R H LK S
Sbjct: 352 RHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLG-ACASLQDLRSGRKIHNQTLKMACS 410
Query: 117 WNLVI-GALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
N+ + AL++ C+++ A+ F + +++ W +++G ++VEA +LF KM
Sbjct: 411 NNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKM 470
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
PA++V +WN +I+GY N +Q I+ L + + A+
Sbjct: 471 PARNVASWNSIISGYAQN---------------------RQFIDALKSFHAMLAS----G 505
Query: 232 QMPETCEKTWNSII---SVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGS 287
Q P E T++S++ + L + K H+ + K +I T + Y + G++ S
Sbjct: 506 QSPG--EITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDS 563
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
+ +VF M R+ W MI GL EN EE + F M +G +P+ TF ++L CS
Sbjct: 564 SKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSH 623
Query: 348 LPTLDLG----RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
++ + A I +T M+ + AR G++ A
Sbjct: 624 SGLVEHAMHYFEMMQACGISPKAKHYT----CMVDVLARAGHLAEA 665
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 141/297 (47%), Gaps = 43/297 (14%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
++ +AQ +F +PQ++ V WN +I GY N + A LF +MP R++ ++N++I+G Q
Sbjct: 428 QLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQ 487
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
+ ++ D ++ ++++M++ G I F + L +L +G +
Sbjct: 488 N------RQFIDALK-----SFHAMLASGQSPGEI-----TFSSVLLACASLCSLEMGKM 531
Query: 125 VNCQ--RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
V+ + ++ + ES F D+ + + G + ++++F +MP ++ AW M
Sbjct: 532 VHAKIIKLGIKESIFVGTALSDMYA---------KSGDLDSSKRVFYEMPKRNDVAWTAM 582
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ----LINGLVNSRRIDAAISYFKQMPETC- 237
I G +NG + LF+ M +T +Q ++ +S ++ A+ YF+ M + C
Sbjct: 583 IQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMM-QACG 641
Query: 238 ----EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA-SWTNVIVGY-----FEMGE 284
K + ++ VL R G + EA L K + A SW ++ EMGE
Sbjct: 642 ISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGE 698
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 48/231 (20%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN-GFLD-----NAMCLFNQMPERDMFTY- 55
N+++ EA+ LF KMP R+ +WN +I GY +N F+D +AM Q P F+
Sbjct: 457 NSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSV 516
Query: 56 --------------------------NTVIAGLMQSD------NVQGAKEVFDGMEVRDV 83
++ G SD ++ +K VF M R+
Sbjct: 517 LLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRND 576
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-SWNLVIGALVNCQRMDLAE---SYFKE 139
V W +MI G NG +E++ +F M + + + L C L E YF+
Sbjct: 577 VAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEM 636
Query: 140 MGARDVAS----WTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAG 185
M A ++ +T MV+ L R G + EA L K+ +K + +W +++
Sbjct: 637 MQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSA 687
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 93/221 (42%), Gaps = 33/221 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMF----TYNT 57
++ + ++ +F +MP+R+ V W MI+G +NGF + ++ LF M + T+
Sbjct: 557 KSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLA 616
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-- 115
++ S V+ A F+ M+ + + Y C ++D R H +D++
Sbjct: 617 ILFACSHSGLVEHAMHYFEMMQACGI---SPKAKHYTC--MVDVLARAGHLAEAEDLLLK 671
Query: 116 --------SWNLVIGAL---VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEA 164
SW ++ A N + + A +E+ + A + ++ N G+ +A
Sbjct: 672 IESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDA 731
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGC--VGVAEDLFQKMH 203
++ M +++ D GC V + ++ QK+
Sbjct: 732 AEMRILMKGINLKK---------DGGCSWVQIRDEQLQKIQ 763
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 207/720 (28%), Positives = 337/720 (46%), Gaps = 129/720 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------------PE---- 49
+++A +FD+M +R TWN M+ + +G A+ L+ +M P
Sbjct: 95 LKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKA 154
Query: 50 -----------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDG--MEVRDVV 84
+F N +IA + ++ GA+ +FDG ME D V
Sbjct: 155 CGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTV 214
Query: 85 TWNSMISGYVCNGLIDEALRVF----------------------------------HGMP 110
+WNS+IS +V G EAL +F HG
Sbjct: 215 SWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAA 274
Query: 111 LK-----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
LK DV N +I C RM+ AE F M RD SW +++GLV+ +A
Sbjct: 275 LKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDAL 334
Query: 166 KLFDKMP--------------------------AKDVQAW-------------NLMIAGY 186
F M K+V A+ N +I Y
Sbjct: 335 NYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMY 394
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIIS 246
CV F+ MH++DL SW +I G + AI+ F+++ +I
Sbjct: 395 AKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIG 454
Query: 247 VLIR--NGL-----VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
++R +GL ++E H Y+ K ++I ++ Y E+G A + FE + ++D
Sbjct: 455 SVLRACSGLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESIRSKD 514
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
+ W MI N L E L+ F +K++ PD+ S L+ ++L +L G++IH
Sbjct: 515 IVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHG 574
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
I+ ++++++ MYA CG ++++ F SV D+I W S+I HG +
Sbjct: 575 FLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNE 634
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A+ LF++M + PD ITF+ +L ACS++GL+ +G+ +F+ MK Y L+P HY C+V
Sbjct: 635 AIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMV 694
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
DLL R ++EA +R+ I+ S VW ALLGAC IH+N ++GE+A + +++ +
Sbjct: 695 DLLSRSNSLEEAYQF---VRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTK 751
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
NSG Y +++ ++ + GR D + + +MK NG+KK PGCSWI++++ H F++ D SHP+
Sbjct: 752 NSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQ 811
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 130/543 (23%), Positives = 226/543 (41%), Gaps = 96/543 (17%)
Query: 67 NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-------------------- 106
+++ A +VFD M R + TWN+M+ +V +G EA+ ++
Sbjct: 94 SLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLK 153
Query: 107 --------------HGMPLKD-----VVSWNLVIGALVNCQRMDLAESYFKE--MGARDV 145
HG+ +K V N +I C + A F M D
Sbjct: 154 ACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDT 213
Query: 146 ASWTIMVNGLVREGRIVEARKLFDKM---------------------PA----------- 173
SW +++ V EG+ +EA LF +M P+
Sbjct: 214 VSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGA 273
Query: 174 -------KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
DV N +IA Y G + AE +F M RD SW L++GLV + A
Sbjct: 274 ALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDA 333
Query: 227 ISYFKQMPETCEKTWN-SIISVLIRNGLV------KEAHSYLEKYPY-SNIASWTNVIVG 278
++YF+ M + +K S+++++ +G KE H+Y + SN+ +I
Sbjct: 334 LNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDM 393
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + V FE M +D+ W +I G +N+ E + F +++ G D
Sbjct: 394 YAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMI 453
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
SVL CS L + + R+IH K + NA++ +Y G+ A F S+
Sbjct: 454 GSVLRACSGLKSRNFIREIHGYVFKRDLADI-MLQNAIVNVYGEVGHRDYARRAFESIRS 512
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
DI+SW S+I ++G +ALELF ++ T+ +PD I + LSA + + +G+
Sbjct: 513 KDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEI 572
Query: 459 FDCMKNK-YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ K +FL+ A + +VD+ G ++ + + + ++ + +W +++ A
Sbjct: 573 HGFLIRKGFFLEGPIA--SSLVDMYACCGTVENSRKMFHSVKQRDL----ILWTSMINAN 626
Query: 518 RIH 520
+H
Sbjct: 627 GMH 629
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 121/527 (22%), Positives = 223/527 (42%), Gaps = 60/527 (11%)
Query: 97 GLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV 156
G + +A++VF M + + +WN ++GA V+ + A +KEM VA ++
Sbjct: 93 GSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVL 152
Query: 157 REGRIVEARKLFDKMPAKDVQA--------WNLMIAGYLDNGCVGVAEDLFQK--MHDRD 206
+ + +L ++ V+ N +IA Y G +G A LF M D
Sbjct: 153 KACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKED 212
Query: 207 LTSWKQLINGLVNSRRIDAAISYFKQMPE--TCEKTWNSIISV-------LIRNGLVKEA 257
SW +I+ V + A+S F++M E T+ + ++ ++ G+
Sbjct: 213 TVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHG 272
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ L+ ++++ +I Y + G + A +VF M RD WN ++ GL +N+L
Sbjct: 273 -AALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYR 331
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
+ L +F M+ S PD + +++ L G+++HA AI+ + + N +I
Sbjct: 332 DALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLI 391
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
MYA+C ++ F + D+ISW +II G A + +A+ LF ++++ D +
Sbjct: 392 DMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPM 451
Query: 438 TFVGVLSACS----------------------------------YAGLVDQGRYYFDCMK 463
VL ACS G D R F+ ++
Sbjct: 452 MIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESIR 511
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
+K + S CV + GL EA+ L ++ I+ + L A +++
Sbjct: 512 SKDIVSWTSMITCCVHN-----GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSL 566
Query: 524 KVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
K G EI G + + + L +MY CG E+++++F +K+
Sbjct: 567 KKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQ 613
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 98/203 (48%), Gaps = 3/203 (1%)
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
++ H+ L K S + T ++ Y + G + A+KVF+ MT R + WN M+ +
Sbjct: 66 QQLHARLLKSHLSAFLA-TKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSG 124
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
E ++ + +M+ G + D TF SVL C L LG +IH A+K +F V N
Sbjct: 125 KYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCN 184
Query: 375 AMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
A+I MY +CG++ A + F + + D +SWNSII G +AL LF RM+
Sbjct: 185 ALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGV 244
Query: 433 KPDDITFVGVLSACSYAGLVDQG 455
+ TFV L V G
Sbjct: 245 ASNTYTFVAALQGVEDPSFVKLG 267
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 116/272 (42%), Gaps = 39/272 (14%)
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
PS + +L +C + L G+Q+HA+ +K + F ++ ++ MY +CG+++ A+
Sbjct: 42 PSRLEHAHSLLLDLCVAVKALPQGQQLHARLLKSHLSAF--LATKLLHMYEKCGSLKDAV 99
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F + I +WN+++ G +A+EL++ MR+ D TF VL AC G
Sbjct: 100 KVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALG 159
Query: 451 LVDQGR----YYFDCMKNKYFLQPRS--AHYTCVVDLLGRFGLID--------------- 489
G C ++ + A Y DL G L D
Sbjct: 160 ESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSI 219
Query: 490 -----------EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
EA++L ++ G+ + + A L + +K+G G L+
Sbjct: 220 ISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLG--MGIHGAALKS 277
Query: 539 NN-SGVYL--ILTEMYLSCGRREDAKRIFAQM 567
N+ + VY+ L MY CGR EDA+R+FA M
Sbjct: 278 NHFADVYVANALIAMYAKCGRMEDAERVFASM 309
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/581 (30%), Positives = 312/581 (53%), Gaps = 32/581 (5%)
Query: 46 QMPERDMFTYNTVIAGLMQS-------DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGL 98
QM + + N ++ L++ D + A VFD ++ ++ WN+M G+ +
Sbjct: 24 QMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGHALSSD 83
Query: 99 IDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR--------DVASWTI 150
AL+++ M ++ + L+ A +++ + D+ T
Sbjct: 84 PVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTS 143
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
+++ V+ GR+ +A+K+ DK +DV ++ +I GY G + A +F ++ +D+ SW
Sbjct: 144 LISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSW 203
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNG---LVKEAHSYLEK 263
I+G + A+ FK+M +T E T +++S ++G L ++ HS++
Sbjct: 204 NAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWIND 263
Query: 264 YPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ + N ++ Y + GE+ +A +F+ ++ +DV WN +I G +L +E L
Sbjct: 264 HGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLL 323
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR--NQFTTVSNAMITMY 380
F M SG P++ T S+L+ C+ L +D+GR IH K + +++ ++I MY
Sbjct: 324 FQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 383
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
A+CG+I++A F S+ + SWN++I G A HG A A ++F RMR +PDDITFV
Sbjct: 384 AKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFV 443
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN--EI 498
G+LSACS++G++D GR+ F M Y L P+ HY C++DL G GL EA ++N E+
Sbjct: 444 GLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEM 503
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
DG+ +W +LL AC++H N+++GE + ++++EP N G Y++L+ +Y + R
Sbjct: 504 EPDGV-----IWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWN 558
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
+ + A + + G+KK PGCS I+I+ H F+ GD HP+
Sbjct: 559 EVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPR 599
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 221/507 (43%), Gaps = 90/507 (17%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKN----------------GFLDNAMC---------- 42
A ++FD + + + WN M RG+ + G L N+
Sbjct: 56 AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK 115
Query: 43 ---------LFNQMP----ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
L Q+ + D++ + ++I+ +Q+ ++ A++V D RDVV++ ++
Sbjct: 116 SXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTAL 175
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV---- 145
I+GY G I+ A ++F +P+KDVVSWN I A FK+M +V
Sbjct: 176 ITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDE 235
Query: 146 ASWTIMVNGLVREGRIVEARKLF----DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
++ +++ + G I R++ D +++ N +I Y G + A LFQ
Sbjct: 236 STMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQG 295
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV--- 254
+ ++D+ SW LI G + A+ F+ M + EK T SI+S G +
Sbjct: 296 LSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIG 355
Query: 255 KEAHSYLEK--YPYSNIASW-TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
+ H Y++K +N +S T++I Y + G++ +A +VF+ M R ++ WN MIFG
Sbjct: 356 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFA 415
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+ F +M+++G PD+ TF +L+ CS LDLGR I
Sbjct: 416 MHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHI-------------- 461
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
+S ++ +P + + +I + G ++A ++ M +
Sbjct: 462 --------------FRSMTRDYKLMP--KLEHYGCMIDLXGHSGLFKEAEKMINTMEM-- 503
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYY 458
+PD + + +L AC G V+ G Y
Sbjct: 504 -EPDGVIWCSLLKACKMHGNVELGESY 529
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 145/346 (41%), Gaps = 89/346 (25%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N R+++AQ + DK RD V++ +I GY G +++A +F+++P +D+ ++N I+
Sbjct: 149 VQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXIS 208
Query: 61 GLMQSDNVQGAKEVFDGMEV--------------------------RDVVTW-------- 86
G ++ N + A E+F M R V +W
Sbjct: 209 GYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGX 268
Query: 87 -----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
N++I Y G ++ A +F G+ KDV+SWN +IG + A F++M
Sbjct: 269 NLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDML 328
Query: 141 ---------------------GARDVASW-------------------TIMVNGLVREGR 160
GA D+ W T +++ + G
Sbjct: 329 RSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 388
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLING 216
I A+++FD M + + +WN MI G+ +G A D+F +M + D ++ L++
Sbjct: 389 IEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSA 448
Query: 217 LVNSRRIDAAISYFKQMPETCE-----KTWNSIISVLIRNGLVKEA 257
+S +D F+ M + + + +I + +GL KEA
Sbjct: 449 CSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEA 494
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 201/679 (29%), Positives = 325/679 (47%), Gaps = 113/679 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----------------- 48
+++A++ FD MP RD V WNVM+ GY K G + A+ LF M
Sbjct: 192 LRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSV 251
Query: 49 ----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
E+++ NT+++ + + A +F+ + D+VTW
Sbjct: 252 CAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTW 311
Query: 87 NSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALV----------------- 125
N MISG V NGL+DEAL +F M D V+ ++ AL
Sbjct: 312 NGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIR 371
Query: 126 NCQRMD------LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
NC MD L + YFK RDV + AR L+D A DV
Sbjct: 372 NCVHMDAFLVSALVDIYFK---CRDVRT----------------ARNLYDAARAIDVVIG 412
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
+ +I+GY+ NG M ++ L ++ L+ + A++ +P
Sbjct: 413 STVISGYVLNG-----------MSEKALQMFRYLLEQCIKPN----AVTVASVLPACAS- 456
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTR 298
IS L L +E H Y+ + Y + ++ Y + G + + +F M+ +
Sbjct: 457 -----ISAL---PLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLK 508
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
D WN MI +N +E L F QM G +N T +S L+ C+ LP + G++IH
Sbjct: 509 DEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIH 568
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
IK +A+I MYA+CGN++ AL F +P + +SWNSII HG +
Sbjct: 569 GVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVK 628
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
+++ RM+ +KPD +TF+ ++SAC++AGLV++G F CM +Y + PR H+ C+
Sbjct: 629 ESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACM 688
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
VDL R G +D+A+ + ++ + +WGALL ACR+H N+++ +IA + + +L+P
Sbjct: 689 VDLYSRSGRLDKAIQFIADM---PFKPDAGIWGALLHACRVHRNVELADIASQELFKLDP 745
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
NSG Y++++ + GR + ++ MK+N + K PG SW+ +N+ H+F++ D SHP
Sbjct: 746 GNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHP 805
Query: 599 KFHRLRYLLNLLHTEIERE 617
+ + L L E+ E
Sbjct: 806 ESEDIYTSLKALLQELREE 824
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 145/601 (24%), Positives = 266/601 (44%), Gaps = 47/601 (7%)
Query: 5 RIQEAQNLFDKMPQR---DTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTY 55
R ++A +F +P+ ++ WN +IRG+ G A+ + +M P D T
Sbjct: 85 RFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTL 144
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
V+ V + V DV +++I Y GL+ +A F GMP
Sbjct: 145 PYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPW 204
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKL 167
+D V WN+++ + + A F+ M + A+ ++ E ++ +L
Sbjct: 205 RDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQL 264
Query: 168 FDKMPA----KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
++V N +++ Y C+ A LF+ + DL +W +I+G V + +
Sbjct: 265 HSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLL 324
Query: 224 DAAISYFKQMPETCEK----TWNSIISVLIR-NGLV--KEAHSYLEKYPYSNIASWTNVI 276
D A+ F M + + T S++ L NGL KE H Y+ + A + +
Sbjct: 325 DEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSAL 384
Query: 277 VG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
V YF+ +V +A +++ DV + + +I G N + E+ L+ F + E P+
Sbjct: 385 VDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNA 444
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
T SVL C+ + L LG++IH ++ A V +A++ MYA+CG + + FS
Sbjct: 445 VTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSK 504
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS-----YAG 450
+ + D ++WNS+I + +G ++AL+LF +M + K +++T LSAC+ Y G
Sbjct: 505 MSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYG 564
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
G +K F + + ++D+ + G ++ A+ + E D EVS W
Sbjct: 565 KEIHGVIIKGPIKADIFAE------SALIDMYAKCGNMELALRVF-EFMPDKNEVS---W 614
Query: 511 GALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+++ A H +K R+ E +P++ +L L G E+ ++F M
Sbjct: 615 NSIISAYGAHGLVKESVSFLHRMQEEGYKPDHV-TFLALISACAHAGLVEEGLQLFQCMT 673
Query: 569 E 569
+
Sbjct: 674 K 674
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 128/541 (23%), Positives = 232/541 (42%), Gaps = 66/541 (12%)
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVS---WNLVIGALVNCQRMDLAESYFKEM----- 140
++ YV +A+ VF +P S WN +I LA ++ +M
Sbjct: 76 LLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPA 135
Query: 141 -GARDVASWTIMVN-----GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ D + +V G V GR+V R A DV + +I Y D G +
Sbjct: 136 APSPDAHTLPYVVKSCAALGAVSLGRLVH-RTARATGLASDVYVGSALIKMYSDAGLLRD 194
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKTWNSIISVL----- 248
A D F M RD W +++G + + + A+ F+ M + CE + ++ L
Sbjct: 195 ARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAA 254
Query: 249 ---IRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWN 304
+ +G+ + HS K + N ++ Y + + A ++FEL+ D+ WN
Sbjct: 255 EADLLSGV--QLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWN 312
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
MI G +N L +E L F M SG PD+ T S+L +DL L G+++H I+
Sbjct: 313 GMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRN 372
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+ + +A++ +Y +C ++++A + + D++ +++I G +G +EKAL++F
Sbjct: 373 CVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMF 432
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-YYFDCMKNKYFLQPRSAHYTCVVDLLG 483
+ KP+ +T VL AC+ + G+ + ++N Y + + + ++D+
Sbjct: 433 RYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAY--EGKCYVESALMDMYA 490
Query: 484 RFGLID-------------------------------EAMNLLNEIRADGIEVSPTVWGA 512
+ G +D EA++L ++ +GI+ + +
Sbjct: 491 KCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISS 550
Query: 513 LLGACRIHNNIKVG-EIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQMKE 569
L AC I G EI G V+ P + ++ L +MY CG E A R+F M +
Sbjct: 551 ALSACASLPAIYYGKEIHG--VIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPD 608
Query: 570 N 570
Sbjct: 609 K 609
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/670 (28%), Positives = 328/670 (48%), Gaps = 64/670 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
++EAQ +FD MP RD VTWN + Y GF + +F +M + D T + +++
Sbjct: 192 VREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSA 251
Query: 62 LMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+++ K + GM V +V N++++ Y + EA VF MP ++V++
Sbjct: 252 CSDLQDLKSGKAIHGFALKHGM-VENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVIT 310
Query: 117 WNLVIGALVNCQRMDLAESYFKEMG----------------------------------- 141
WN + VNC + F+EMG
Sbjct: 311 WNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAV 370
Query: 142 ----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
DV T +VN + EA+ +FD MP ++V WN + + Y++ G +
Sbjct: 371 KHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLN 430
Query: 198 LFQKMH----DRDLTSWKQLINGLVNSRRIDAA--ISYFKQMPETCEKTW--NSIISVLI 249
+F++M DL + +++ + + + + I F E + N+++S+
Sbjct: 431 VFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYA 490
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT----VWNV 305
+ V+EA + P+ +ASW ++ YF E + +F M +V W+V
Sbjct: 491 KCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSV 550
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
+I G +N EE ++ F +M+ G PD T S+L CS L +G++IH +
Sbjct: 551 VIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHW 610
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
++ +NA++ MYA+CG + + F +PI D+ SWN++I HG ++AL LFE
Sbjct: 611 KDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFE 670
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRF 485
+M L+ KPD TF VLSACS++ LV++G F+ M + ++P + HYTCVVD+ R
Sbjct: 671 KMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRA 730
Query: 486 GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL 545
G ++EA + + +E + W A L CR++ N+++ +I+ +++ E++PN S Y+
Sbjct: 731 GCLEEAYGFIQRM---PMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYV 787
Query: 546 ILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRY 605
L + ++ +A +I MKE G+ K PGCSW + + H F++GD S+ + ++
Sbjct: 788 TLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYN 847
Query: 606 LLNLLHTEIE 615
L+ L +I+
Sbjct: 848 FLDELFAKIK 857
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 145/596 (24%), Positives = 256/596 (42%), Gaps = 79/596 (13%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
++ A+ +FD + RD VTWN + Y GF + +F +M + + T ++++ G
Sbjct: 91 VEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPG 150
Query: 62 LMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+++ KE+ GM V DV ++ ++ Y + EA VF MP +DVV+
Sbjct: 151 CSDLQDLKSGKEIHGFVVRHGM-VEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVT 209
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGL---------VREGRIVEARKL 167
WN + VNC + F+EM V + V+ + ++ G+ + L
Sbjct: 210 WNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFAL 269
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
M ++V N ++ Y CV A+ +F M R++ +W L + VN +
Sbjct: 270 KHGM-VENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGL 328
Query: 228 SYFKQMPETCEK----TWNSIISVL-----IRNGLVKEAHSYLEKYP-YSNIASWTNVIV 277
+ F++M K +SI+ +++G K H + K+ ++ T ++
Sbjct: 329 NVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG--KTIHGFAVKHGMVEDVFVCTALVN 386
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y V A VF+LM R+V WN + ++GL F +M +G PD T
Sbjct: 387 LYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVT 446
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
S+L CSDL L G+ IH A++ + V NA++++YA+C ++ A + F +P
Sbjct: 447 MLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIP 506
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
++ SWN I+ + EK L +F +M + K D+IT+ V+ C V R
Sbjct: 507 HREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGC-----VKNSR- 560
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
I+EAM + +++ G + T ++L AC
Sbjct: 561 ------------------------------IEEAMEIFRKMQTMGFKPDETTIYSILRAC 590
Query: 518 RIHNNIKVGEIAGERVM------ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ +++G+ V +L N+ L +MY CG ++ +F M
Sbjct: 591 SLSECLRMGKEIHCYVFRHWKDWDLARTNA-----LVDMYAKCGGLSLSRNVFDMM 641
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 130/525 (24%), Positives = 223/525 (42%), Gaps = 58/525 (11%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
DV N+ I Y ++ A RVF + +DVV+WN + VNC + F++MG
Sbjct: 74 DVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMG 133
Query: 142 ARDVASWTIMVNGL---------VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
V + + V+ + ++ G+ + + M +DV + + Y CV
Sbjct: 134 LNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGM-VEDVFVSSAFVNFYAKCLCV 192
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIIS 246
A+ +F M RD+ +W L + VN ++ F++M P+ T + I+S
Sbjct: 193 REAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPV--TVSCILS 250
Query: 247 VL-----IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE-VGSAIKVFELMTTRDV 300
+++G K H + K+ +N +V +E V A VF+LM R+V
Sbjct: 251 ACSDLQDLKSG--KAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNV 308
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
WN + ++GL F +M +G PD +S+L CS L L G+ IH
Sbjct: 309 ITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGF 368
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
A+K + V A++ +YA C ++ A F +P ++++WNS+ G+ +K
Sbjct: 369 AVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKG 428
Query: 421 LELFERMRLTDFKPDDITFVGVLSACS-----YAGLVDQGRYYFDCMKNKYF----LQPR 471
L +F M L KPD +T + +L ACS +G V G M F L
Sbjct: 429 LNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSL 488
Query: 472 SAHYTCVVDLLGRFGLI---------------------DEAMNLLNEIRADGIEVSPTVW 510
A CV + F LI ++ + + +++ D ++ W
Sbjct: 489 YAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITW 548
Query: 511 GALLGACRIHNNIKVG-EIAGE-RVMELEPNNSGVYLILTEMYLS 553
++G C ++ I+ EI + + M +P+ + +Y IL LS
Sbjct: 549 SVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLS 593
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 146/342 (42%), Gaps = 41/342 (11%)
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
S+++ I Y + V A +VF+ + RDV WN + ++GL F +M
Sbjct: 73 SDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKM 132
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
+ + T +S+L CSDL L G++IH ++ + VS+A + YA+C +
Sbjct: 133 GLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCV 192
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
+ A F +P D+++WNS+ G+ +K L +F M L KPD +T +LSAC
Sbjct: 193 REAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSAC 252
Query: 447 S----------------YAGLVD-------------------QGRYYFDCMKNKYFLQPR 471
S G+V+ + + FD M ++ +
Sbjct: 253 SDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWN 312
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE-IAG 530
S +C V+ G + +N+ E+ +G++ P ++L AC ++K G+ I G
Sbjct: 313 SL-ASCYVNC----GFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHG 367
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
V + V L +Y +C +A+ +F M V
Sbjct: 368 FAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNV 409
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 125/335 (37%), Gaps = 71/335 (21%)
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
FG+ + L E +K + + G PD F +V C+ +Q H A +
Sbjct: 14 FGI-PHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVM 72
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
++ NA I Y +C ++ A F + D+++WNS+ G+ ++ L +F +M
Sbjct: 73 SDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKM 132
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGR-----------------------YYFDCM-- 462
L K + +T +L CS + G+ +Y C+
Sbjct: 133 GLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCV 192
Query: 463 ---KNKYFLQPR------SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+ + L P ++ +C V+ G + +N+ E+ DG++ P +
Sbjct: 193 REAQTVFDLMPHRDVVTWNSLSSCYVNC----GFPQKGLNVFREMVLDGVKPDPVTVSCI 248
Query: 514 LGACRIHNNIKVGEI-------------------------------AGERVMELEPN-NS 541
L AC ++K G+ + V +L P+ N
Sbjct: 249 LSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNV 308
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
+ L Y++CG + +F +M NGVK +P
Sbjct: 309 ITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDP 343
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 23/257 (8%)
Query: 1 MRNARIQEAQNLFDKMP----QRDTVTWNVMIRGYFKNGFL---DNAMC-LFNQMPERDM 52
++N+RI+EA +F KM + D T ++R + L C +F + D+
Sbjct: 556 VKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDL 615
Query: 53 FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
N ++ + + ++ VFD M ++DV +WN+MI +G EAL +F M L
Sbjct: 616 ARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLS 675
Query: 113 ----DVVSWNLVIGALVNCQRMDLAESYFKEMGARD------VASWTIMVNGLVREGRIV 162
D ++ V+ A + ++ F M +RD +T +V+ R G +
Sbjct: 676 MVKPDSATFTCVLSACSHSMLVEEGVQIFNSM-SRDHLVEPEAEHYTCVVDIYSRAGCLE 734
Query: 163 EARKLFDKMPAKDVQ-AWNLMIAGYLDNGCVGVAEDLFQKMHDRDL---TSWKQLINGLV 218
EA +MP + AW +AG V +A+ +K+ + D ++ L N LV
Sbjct: 735 EAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILV 794
Query: 219 NSRRIDAAISYFKQMPE 235
++ A K M E
Sbjct: 795 TAKLWSEASKIRKLMKE 811
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 316/634 (49%), Gaps = 30/634 (4%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+Q A+ + ++MP +D WN + L A+ LF M + + A L+ +
Sbjct: 40 LQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISA 99
Query: 66 DNVQGAKEVFDGMEV--------RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
G + + D++ N+ ++ Y+ ++ + F M ++++ S
Sbjct: 100 AASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASR 159
Query: 118 NLVIGALVNCQRMD---------LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
N ++ + + D L E + M T G + EG+ + + +
Sbjct: 160 NNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIK 219
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+ D WN ++ Y G A +F ++ +RD+ SW LI G V + + +
Sbjct: 220 SGINP-DSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFV-AEGYGSGLR 277
Query: 229 YFKQM-PETCEKTWNSIISVLIRNG------LVKEAHSYLEKYPY-SNIASWTNVIVGYF 280
F QM E + IS+L L K+ H+ + K N T ++ Y
Sbjct: 278 IFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYA 337
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ + A +F + RD+ W V++ G ++ GE+ +K F+QM+ G P+ T S
Sbjct: 338 KNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLAS 397
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
L+ CS + TLD GRQ+H+ AIK ++ V++A++ MYA+CG ++ A + F + D
Sbjct: 398 SLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRD 457
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+SWN+IICG + HG KAL+ FE M PD++TF+GVLSACS+ GL+++G+ +F+
Sbjct: 458 TVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFN 517
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
+ Y + P HY C+VD+LGR G E + + E++ + + +W +LGAC++H
Sbjct: 518 SLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMK---LTSNVLIWETVLGACKMH 574
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
NI+ GE A ++ ELEP Y++L+ M+ + G +D + A M GVKKEPGCSW
Sbjct: 575 GNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSW 634
Query: 581 IQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
+++N HVFLS D SHPK + L LH ++
Sbjct: 635 VEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKL 668
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 192/455 (42%), Gaps = 34/455 (7%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
D W+S+++ YV + A +V MP++DV WN + + + + A F M
Sbjct: 23 DSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLM- 81
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW-------------NLMIAGYLD 188
I +N + I A L D + + A N + Y+
Sbjct: 82 ----RHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMK 137
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSI 244
V F+ M +L S L++G ++ D Q+ E T+ SI
Sbjct: 138 TQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISI 197
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIAS----WTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
+ G + E + + S I W +++ Y + G A KVF + RDV
Sbjct: 198 LKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDV 257
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W +I G G GL+ F QM G +P+ TF S+L CS L +DLG+Q+HAQ
Sbjct: 258 VSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQ 316
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
+K + + V A++ MYA+ ++ A F+ + D+ +W I+ G A G EKA
Sbjct: 317 IVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKA 376
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
++ F +M+ KP++ T LS CS +D GR M K + +VD
Sbjct: 377 VKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGR-QLHSMAIKAGQSGDMFVASALVD 435
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTV-WGALL 514
+ + G +++A E+ DG+ TV W ++
Sbjct: 436 MYAKCGCVEDA-----EVVFDGLVSRDTVSWNTII 465
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 102/252 (40%), Gaps = 49/252 (19%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----------- 50
+N +++A+ +F+++ +RD W V++ GY ++G + A+ F QM
Sbjct: 338 KNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLAS 397
Query: 51 ----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
DMF + ++ + V+ A+ VFDG+ RD
Sbjct: 398 SLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRD 457
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQRMDLAESYFKEMG 141
V+WN++I GY +G +AL+ F M + V + IG L C M L E K
Sbjct: 458 TVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFN 517
Query: 142 ARD--------VASWTIMVNGLVREGRIVEARKLFDKMP-AKDVQAWNLMIAGYLDNGCV 192
+ + + MV+ L R G+ E ++M +V W ++ +G +
Sbjct: 518 SLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNI 577
Query: 193 GVAEDLFQKMHD 204
E K+ +
Sbjct: 578 EFGERAAMKLFE 589
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 205/652 (31%), Positives = 314/652 (48%), Gaps = 74/652 (11%)
Query: 16 MPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTY---------------- 55
MP+R+ V+WN +I GY + GF M LF + D+ FT+
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 56 -------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN 96
N++I + + A+ VF+ + D V+WNS+I+GYV
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 97 GLIDEALRVF-----HGMPLKDVVSWNLV------IGALVNCQRMDLAESYFKEMGARDV 145
G DE LR+ HG+ L + + + + C +M L K DV
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKM-LHGCAVKLGLDLDV 179
Query: 146 ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
T +++ + G + +A K+F MP +V +N MIAG+L + M D
Sbjct: 180 VVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ----------METMAD- 228
Query: 206 DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
+ + + + SR + + F + + C S + K+ H+ + KY
Sbjct: 229 EFANEAMYLFFEMQSRGMKPSEFTFSSILKAC--------STIEAFECGKQIHAQIFKYN 280
Query: 266 YSNIASWTNVIVGYFEM-GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
+ N +V + + G + +K F DV W +I G +N E GL F
Sbjct: 281 LQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFH 340
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
++ SG PD T + +L+ C++L + G QIHA AIK FT + N+ I MYA+CG
Sbjct: 341 ELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCG 400
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+I SA + F DI+SW+ +I A HG A++A++LFE M+ + P+ ITF+GVL
Sbjct: 401 DIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLV 460
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
ACS+ GLV++G YF+ MK + + P H C+VDLLGR G + EA + I G E
Sbjct: 461 ACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESF---IMDSGFE 517
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
P +W +LL ACR+H G+ ERV+ELEP + Y++L +Y G + A I
Sbjct: 518 GDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIR 577
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
MK+ GVKKEPG SWI++ + H F++GD SHP + L + EI++
Sbjct: 578 NLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKK 629
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 127/585 (21%), Positives = 244/585 (41%), Gaps = 85/585 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ RI A+ +F+ + D+V+WN +I GY + G D + L +M + + +
Sbjct: 88 KCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGS 147
Query: 62 LMQ------SDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMP 110
++ S +++ K + G V+ DVV +++ Y G +++A ++F MP
Sbjct: 148 ALKACGSNFSSSIECGK-MLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP 206
Query: 111 LKDVVSWNLVIGALVNCQRM-----DLAESYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
+VV +N +I + + M + A F EM +R + + +++ +EA
Sbjct: 207 DPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAF 266
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCV------GVAEDLFQKMHDR---DLTSWKQLING 216
+ ++ A+ + +NL ++ N V G ED + H D+ SW LI G
Sbjct: 267 ECGKQIHAQ-IFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVG 325
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISVL---------IRNGLVKEAHSYLEKYPYS 267
V + + + ++ F ++ + K IS++ +++G ++ H+Y K
Sbjct: 326 HVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSG--EQIHAYAIKTGIG 383
Query: 268 NIASWTNV-IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
N N I Y + G++ SA F+ D+ W+VMI ++ +E + F M
Sbjct: 384 NFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELM 443
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
K SG +P++ TF VL CS ++ G + +I + N
Sbjct: 444 KGSGIAPNHITFLGVLVACSHGGLVEEGLRY----FEIMKKDHGITPNVK---------- 489
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
S I D++ G A + E + + F+ D + + +LSAC
Sbjct: 490 -------HSACIVDLL------------GRAGRLAEAESFIMDSGFEGDPVMWRSLLSAC 530
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPR-SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
D G+ + + L+P +A Y + ++ G+ A + N ++ G++
Sbjct: 531 RVHKATDTGKRVAERVIE---LEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKK 587
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
P + +G N+ +AG+R PN+ +Y+ L EM
Sbjct: 588 EPGLSWIEVG------NVVHSFVAGDRS---HPNSQVIYVQLEEM 623
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 193/614 (31%), Positives = 312/614 (50%), Gaps = 58/614 (9%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
+T N +I Y K G + +A LF+ P + + N ++ G ++ + A+++FD M
Sbjct: 303 NTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQLDNARKLFDIMP 362
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI----------GALVNCQR 129
+ V++ +MI G V N EAL VF M VV +L + G ++NC+
Sbjct: 363 DKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRM 422
Query: 130 MD-LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD 188
+ +A F E + S +M + G + EAR+LFD+MP ++ +WN+M+ GY
Sbjct: 423 IHAIAIKLFVE--GLVLVSTNLMRAYCLCSG-VGEARRLFDRMPEVNLVSWNVMLNGYAK 479
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET------------ 236
G V +A +LF+++ D+D+ SW +I+G + R+ A+ ++ M +
Sbjct: 480 AGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNL 539
Query: 237 ---CEK--------------------TWNSIISVLIR----NGLVKEAHSYLEKYPYSNI 269
C + +N I + +I G++ A E ++
Sbjct: 540 VSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHL 599
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
SW ++ G+ + V A K+F+ M RDV W+ MI G + D L+ F +M S
Sbjct: 600 ESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVAS 659
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G P+ T SV + + L TL GR H + + A+I MYA+CG+I SA
Sbjct: 660 GIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALIDMYAKCGSINSA 719
Query: 390 LLEFSSV--PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
L F+ + + WN+IICGLA HG+A L++F M+ + KP+ ITF+GVLSAC
Sbjct: 720 LQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSACC 779
Query: 448 YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
+AGLV+ GR F MK+ Y ++P HY C+VDLLGR GL++EA + IR+ ++
Sbjct: 780 HAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEM---IRSMPMKADI 836
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+WG LL ACR H ++ +GE A E + L P++ G ++L+ +Y GR ED + +
Sbjct: 837 VIWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRAI 896
Query: 568 KENGVKKEPGCSWI 581
+ +++ PGCS +
Sbjct: 897 QNQRMERMPGCSGV 910
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 34/145 (23%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
S L CS + GRQ+H+ +K+ + T + N++I MYA+ G+I+ A L F +
Sbjct: 274 ALVSALKYCS---SSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDAC 330
Query: 397 PIHDIISWNSIICGLAYHGYAE-------------------------------KALELFE 425
P + IS N ++CG A G + +ALE+F+
Sbjct: 331 PTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFK 390
Query: 426 RMRLTDFKPDDITFVGVLSACSYAG 450
MR P+D+T V V+ ACS+ G
Sbjct: 391 DMRSDGVVPNDLTLVNVIYACSHFG 415
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 102/249 (40%), Gaps = 55/249 (22%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PERDMF 53
++N + +A+ +FD MP+RD +W+ MI GY + A+ LF++M E M
Sbjct: 610 IKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMV 669
Query: 54 TYNTVIAGL--------------------------------MQSDNVQGAKEVFDGMEVR 81
+ + IA L + ++ A + F+ ++R
Sbjct: 670 SVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALIDMYAKCGSINSALQFFN--QIR 727
Query: 82 D----VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQRMDLAES- 135
D V WN++I G +G L VF M ++ + IG L C L E
Sbjct: 728 DKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSACCHAGLVEPG 787
Query: 136 --YFKEMGAR-----DVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYL 187
F+ M + D+ + MV+ L R G + EA ++ MP K D+ W ++A
Sbjct: 788 RRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIRSMPMKADIVIWGTLLAACR 847
Query: 188 DNGCVGVAE 196
+G V + E
Sbjct: 848 THGDVNIGE 856
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 268/467 (57%), Gaps = 18/467 (3%)
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM-HDRDLTSWKQLINGLVN 219
+ EARKLFD +D+ +WN +I GY+ G A ++F +M D +T + + G+V+
Sbjct: 171 MAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVS 230
Query: 220 S----------RRIDAAISYFKQMPETCE-KTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
RR+ Y + C + N ++ + I+ G ++ A S E
Sbjct: 231 GSAQLRDLELGRRLHG---YVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKT 287
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
I SWT +IVGY + G + A KVF+ M RDV WN ++ G + G+E L+ F M+E
Sbjct: 288 IVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQE 347
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
+ PD+ T ++L+ CS L L++G +H + + + ++ MY++CGNI+
Sbjct: 348 AMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEK 407
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A+ F +P + ++W ++I GLA HG+A+ A++ F+RM +PD+ITF+GVLSAC +
Sbjct: 408 AIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCH 467
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
AGLV +G+ +F M +KY L+ + HY+C+VDLLGR G +DEA +L+N + +E
Sbjct: 468 AGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTM---PMEPDAV 524
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
VWGAL ACR+H NI +GE A +++EL+P +SG+Y++L MY R+ A ++ M+
Sbjct: 525 VWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADKVRVMMR 584
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
GV+K PGCS I++N H F+ D SH + L+ + +IE
Sbjct: 585 HLGVEKVPGCSCIELNGVVHEFIVKDKSHTDIAAIYDCLHEITLQIE 631
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 206/441 (46%), Gaps = 33/441 (7%)
Query: 32 FKNGFLDNAMCL-FNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMI 90
+ N L N + L F+ D+F N + L ++ A+++FDG VRD+V+WN++I
Sbjct: 138 YGNAVLGNVLSLGFHA----DVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLI 193
Query: 91 SGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVNCQRMDLA---ESYFKEMGA 142
GYV G+ EAL +F G D V+ V+ + ++L Y + G
Sbjct: 194 GGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGV 253
Query: 143 R-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
R V ++++ ++ G + A+ +F+ + K + +W MI GY G + A +F +
Sbjct: 254 RCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDE 313
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLVKEA 257
M +RD+ W L+ G V +R A+ F M E + T +++S + G ++
Sbjct: 314 MPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMG 373
Query: 258 ---HSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
H Y+++ S ++ TN++ Y + G + AI+VF+ + ++ W MI GL +
Sbjct: 374 MWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANH 433
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI-KIARNQFTTV 372
+ +K+F +M E G PD TF VL+ C + G++ + + K +
Sbjct: 434 GHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKH 493
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHG---YAEKALELFERMR 428
+ M+ + R G + A +++P+ D + W ++ HG EKA M+
Sbjct: 494 YSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHGNITLGEKA-----AMK 548
Query: 429 LTDFKPDDITFVGVLSACSYA 449
L + P D + + VL A YA
Sbjct: 549 LVELDPGD-SGIYVLLANMYA 568
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 176/421 (41%), Gaps = 96/421 (22%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PE------- 49
+ + EA+ LFD RD V+WN +I GY + G A+ +F +M P+
Sbjct: 169 SSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGV 228
Query: 50 -------------RDMFTY-------------NTVIAGLMQSDNVQGAKEVFDGMEVRDV 83
R + Y N V+ ++ +++ AK VF+G++ + +
Sbjct: 229 VSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTI 288
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM--- 140
V+W +MI GY GL+D+A +VF MP +DV WN ++ V C+R A F +M
Sbjct: 289 VSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEA 348
Query: 141 -------------------GARDVASW-----------------TIMVNGLVREGRIVEA 164
GA ++ W T +V+ + G I +A
Sbjct: 349 MVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKA 408
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD----RDLTSWKQLINGLVNS 220
++F ++P K+ W MI+G ++G VA FQ+M + D ++ +++ ++
Sbjct: 409 IRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHA 468
Query: 221 RRIDAAISYFKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTN 274
+ +F M E K ++ ++ +L R G + EA + P + W
Sbjct: 469 GLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGA 528
Query: 275 VIV-----GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
+ G +GE +A+K+ EL D ++ ++ E ++ ++ K V M+
Sbjct: 529 LFFACRMHGNITLGE-KAAMKLVEL-DPGDSGIYVLLANMYAEANMRKKADKVRVMMRHL 586
Query: 330 G 330
G
Sbjct: 587 G 587
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 11/245 (4%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD+ TF +L C+ L + G + + + + V NA + A C ++ A
Sbjct: 118 PDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKL 177
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD--FKPDDITFVGVLSACSYAG 450
F + D++SWN++I G G +ALE+F RM + D PD++T +GV+S +
Sbjct: 178 FDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRM-VGDGAVTPDEVTMIGVVSGSAQLR 236
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
++ GR +++ + ++ V+D+ + G ++ A ++ I I T+
Sbjct: 237 DLELGRRLHGYVES-HGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMI 295
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
+ + KV + ER ++ P N+ L Y+ C R ++A R+F M+E
Sbjct: 296 VGYAQFGLMDDARKVFDEMPER--DVFPWNA-----LMTGYVQCKRGKEALRLFHDMQEA 348
Query: 571 GVKKE 575
V+ +
Sbjct: 349 MVEPD 353
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/576 (31%), Positives = 299/576 (51%), Gaps = 19/576 (3%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
ERDMF N++I + + + VFD M R+VV+W S+I GY G EA+ +F
Sbjct: 171 ERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFE 230
Query: 109 MP----LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGR 160
M + V+ VI A Q + L E +G ++ +MVN LV + G
Sbjct: 231 MVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGA 290
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNG----CVGVAEDLFQKMHDRDLTSWKQLING 216
I +ARK+FD+ K++ +N +++ Y+ G + V ++ + D + ++
Sbjct: 291 IDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSA 350
Query: 217 LVNSRRIDAAI----SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW 272
+ + E + N+II++ ++ G + A ++ SW
Sbjct: 351 CSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSW 410
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
++I G+ G++ SA K+F M D+ WN MI L + + +E ++ F M+ G +
Sbjct: 411 NSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGIT 470
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
D T V + C L LDL + IH K + + A++ M+ARCG+ QSA+
Sbjct: 471 ADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQV 530
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F+ + D+ +W + I +A G A+ELF+ M KPD + FV +L+A S+ GLV
Sbjct: 531 FNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLV 590
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+QG + F MK+ Y + P++ HY C+VDLLGR GL+ EA++L+N ++ +E + +WG+
Sbjct: 591 EQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQ---MEPNDVIWGS 647
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LL ACR+H N+ + A ER+ EL+P +G++++L+ +Y S GR +D ++ +KE G
Sbjct: 648 LLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGA 707
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
K PG S I+IN F +GD SHP+ + +L
Sbjct: 708 HKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLK 743
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 134/532 (25%), Positives = 227/532 (42%), Gaps = 84/532 (15%)
Query: 10 QNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-------------------- 49
+ +FDKM +R+ V+W +I GY K G A+ LF +M E
Sbjct: 194 RRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKL 253
Query: 50 RDM-------------------FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMI 90
+D+ N ++ M+ + A+++FD +++V +N+++
Sbjct: 254 QDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIM 313
Query: 91 SGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVNCQRMD------LAESYFKE 139
S YV GL E L V HG P D ++ ++ A+ C +D Y
Sbjct: 314 SNYVRQGLAREVLAVLGEMLKHG-PRPDRIT---MLSAVSACSELDDVSCGKWCHGYVLR 369
Query: 140 MGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
G + W + N ++ + G+ A ++FD+M K +WN +IAG++ NG + A
Sbjct: 370 NG---LEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESA 426
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE---TCEKTWNSIISVLIRNG 252
+F M D DL SW +I LV AI F+ M T +K +++ V G
Sbjct: 427 WKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKV--TMVGVASACG 484
Query: 253 ------LVKEAHSYLEKYP-YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV 305
L K H Y++K + ++ T ++ + G+ SA++VF M RDV+ W
Sbjct: 485 YLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTA 544
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
I + G ++ F +M + G PD F ++LT S ++ G I I
Sbjct: 545 AIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIY 604
Query: 366 RNQFTTVS-NAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYHGYAEKALE 422
V M+ + R G + AL +S+ + +D+I W S++ H + A
Sbjct: 605 GIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVI-WGSLLAACRVHKNVDIAAY 663
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
E R+++ P+ T + VL + YA GR+ D K + L+ + AH
Sbjct: 664 AAE--RISELDPER-TGIHVLLSNIYA---SAGRWD-DVAKVRLHLKEKGAH 708
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 152/361 (42%), Gaps = 54/361 (14%)
Query: 254 VKEAHSYLEKYPYSNIA-SWTNVIVGYFEMGEVGS---AIKVFELMTTRDVTV-----WN 304
+K+ HS + K ++ S TN+I EMG S A K EL + + ++
Sbjct: 49 LKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFS 108
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
+I G LG + + F Q+ G PDN TF VL+ C+ L G Q+H +K+
Sbjct: 109 SLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKM 168
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+ V N++I Y CG I F + +++SW S+I G A G ++A+ LF
Sbjct: 169 GFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLF 228
Query: 425 ERMRLTDFKPDDITFVGVLSACS-----------------------------------YA 449
M +P+ +T VGV+SAC+
Sbjct: 229 FEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKC 288
Query: 450 GLVDQGRYYFD-CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
G +D+ R FD C+ L Y ++ R GL E + +L E+ G
Sbjct: 289 GAIDKARKIFDECVDKNLVL------YNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRI 342
Query: 509 VWGALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
+ + AC +++ G+ V+ LE ++ I+ MY+ CG++E A R+F +
Sbjct: 343 TMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIIN-MYMKCGKQEMACRVFDR 401
Query: 567 M 567
M
Sbjct: 402 M 402
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 14/217 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ + + A +FD+M + V+WN +I G+ +NG +++A +F+ MP+ D+ ++NT+I
Sbjct: 387 MKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIG 446
Query: 61 GLMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
L+Q + A E+F M+ D VT + S G +D A + HG K +
Sbjct: 447 ALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLA-KWIHGYIKKKDIH 505
Query: 117 WNLVIG-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
+++ +G ALV+ C A F +M RDV++WT + + EG A +LFD+M
Sbjct: 506 FDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEM 565
Query: 172 PAKDVQAWNLMIAGYL----DNGCVGVAEDLFQKMHD 204
+ ++ ++ L G V +F+ M D
Sbjct: 566 LQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKD 602
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 215/738 (29%), Positives = 336/738 (45%), Gaps = 134/738 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I A LFD MP D V+WN ++ GY + G ++ LF +M R + T A L++S
Sbjct: 99 ISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKS 158
Query: 66 DN--------VQ-GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+ VQ A V G+E+ DV T ++++ Y +D+AL F+GMP ++ VS
Sbjct: 159 CSALEELSLGVQVHALAVKTGLEI-DVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVS 217
Query: 117 WNLVIGALVN-------------CQRMDLA------ESYFKEMGA--------------- 142
W I V QR+ L S F+ A
Sbjct: 218 WGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAI 277
Query: 143 -----RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
D T +V+ + + +AR+ F +P V+ N M+ G + G A
Sbjct: 278 KNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 337
Query: 198 LFQKM---------------------------------------HDRDLTSWKQLINGLV 218
LFQ M D D+ +++
Sbjct: 338 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 397
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRN-------------------------GL 253
+ + A F+ M + +WN+II+ L +N G
Sbjct: 398 KCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGS 457
Query: 254 VKEAHSYLEKYPY--------------SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
V +A + L Y S+ + V+ Y + G + A K+ + + +
Sbjct: 458 VLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQ 517
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
V WN ++ G N EE KFF +M + G PD+ TF +VL C++L T++LG+QIH
Sbjct: 518 VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHG 577
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
Q IK +S+ ++ MYA+CG++ +LL F V D +SWN++ICG A HG +
Sbjct: 578 QIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVE 637
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
AL +FERM+ + P+ TFV VL ACS+ GL D G YF M Y L+P+ H+ C+V
Sbjct: 638 ALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 697
Query: 480 DLLGRFGLIDEAMNLLNEI--RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
D+LGR EA+ +N + +AD + +W LL C+I ++++ E+A V+ L+
Sbjct: 698 DILGRSKGPQEAVKFINSMPFQADAV-----IWKTLLSICKIRQDVEIAELAASNVLLLD 752
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
P++S VY++L+ +Y G+ D R +K+ +KKEPGCSWI++ H FL GD +H
Sbjct: 753 PDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAH 812
Query: 598 PKFHRLRYLLNLLHTEIE 615
P+ L +LN L E++
Sbjct: 813 PRSGELYEMLNDLIGEMK 830
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 222/503 (44%), Gaps = 61/503 (12%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGA 71
+FD MP+RDTV+WN M+ Y G + A+ LF+ MP+ D+ ++N +++G Q Q +
Sbjct: 74 VFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQES 133
Query: 72 KEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRV-FHGMPLK-----DVVSWNLVI 121
++F M R D T+ ++ C+ L + +L V H + +K DV + + ++
Sbjct: 134 VDLFVEMARRGVSPDRTTFAVLLKS--CSALEELSLGVQVHALAVKTGLEIDVRTGSALV 191
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
C+ +D A +F M R+ SW + G V+ + V +LF +M +
Sbjct: 192 DMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQP 251
Query: 182 MIAGYLDN----GCVGVAEDLFQKMHDRDLTSWKQLINGLVN-----SRRIDAAISYFKQ 232
A + C+ L +S + + +V+ + DA ++F
Sbjct: 252 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFG- 310
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI----ASWTNVIV------GYFEM 282
+P +T N+++ L+R GL EA + S+I S + V GYF+
Sbjct: 311 LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG 370
Query: 283 GEVGS-AIK----------------------------VFELMTTRDVTVWNVMIFGLGEN 313
+V AIK +F+ M +D WN +I L +N
Sbjct: 371 QQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQN 430
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
++ + F +M G PD+ T+ SVL C+ L +L+ G +H + IK V+
Sbjct: 431 GHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVA 490
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
+ ++ MY +CG I A + ++SWN+I+ G + + +E+A + F M K
Sbjct: 491 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 550
Query: 434 PDDITFVGVLSACSYAGLVDQGR 456
PD TF VL C+ ++ G+
Sbjct: 551 PDHFTFATVLDTCANLATIELGK 573
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 138/598 (23%), Positives = 241/598 (40%), Gaps = 73/598 (12%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N +++ Y + A +F+ MP RD ++NT++ + ++ A +FDGM DVV
Sbjct: 56 NCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVV 115
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
+WN+++SGY G+ E++ +F M + V L+ K A +
Sbjct: 116 SWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLL------------KSCSALE 163
Query: 145 VASWTIMVNGL-VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
S + V+ L V+ G + DV+ + ++ Y + A F M
Sbjct: 164 ELSLGVQVHALAVKTGLEI------------DVRTGSALVDMYGKCRSLDDALCFFYGMP 211
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQM---------PETCEKTWNSIISVLIRNGLV 254
+R+ SW I G V + + + F +M P + + G
Sbjct: 212 ERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQ 271
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
AH+ K+ + T ++ Y + + A + F + V N M+ GL
Sbjct: 272 LHAHAIKNKFSSDRVVG-TAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAG 330
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
LG E + F M S D + + V + C++ G+Q+H AIK + V+N
Sbjct: 331 LGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNN 390
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
A++ +Y +C + A L F + D +SWN+II L +G+ + + F M KP
Sbjct: 391 AVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKP 450
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
DD T+ VL AC+ ++ G D + K L + + VVD+ + G+IDEA L
Sbjct: 451 DDFTYGSVLKACAALRSLEYGLMVHDKVI-KSGLGSDAFVASTVVDMYCKCGIIDEAQKL 509
Query: 495 LNEIRAD-------------------------------GIEVSPTVWGALLGACRIHNNI 523
+ I G++ + +L C I
Sbjct: 510 HDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATI 569
Query: 524 KVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
++G +I G+ + + ++ + L +MY CG D+ +F + V+K SW
Sbjct: 570 ELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEK-----VEKRDFVSW 622
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 196/481 (40%), Gaps = 82/481 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
+ EA +F M Q+D+V+WN +I +NG D+ + FN+M + D FTY +V+
Sbjct: 402 LMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKA 461
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ + G+ V D V + + S D + V+
Sbjct: 462 ------CAALRSLEYGLMVHDKVIKSGLGS---------------------DAFVASTVV 494
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
C +D A+ +G + V SW +++G EA+K F +M ++ +
Sbjct: 495 DMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHF 554
Query: 182 MIAGYLDNGCVGVAE-DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK--QMP---- 234
A LD C +A +L +++H + + + L + ++S +D Y K MP
Sbjct: 555 TFATVLDT-CANLATIELGKQIHGQ-IIKQEMLDDEYISSTLVDM---YAKCGDMPDSLL 609
Query: 235 --ETCEK----TWNSIISVLIRNGLVKEAHSYLEKYPYSNI----ASWTNVIVGYFEMGE 284
E EK +WN++I +GL EA E+ N+ A++ V+ +G
Sbjct: 610 VFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGL 669
Query: 285 VGSAIKVFELMTTR-----DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ F LMTT + + M+ LG + +E +KF M D +
Sbjct: 670 FDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQA---DAVIWK 726
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA-----LLEFS 394
++L+IC +++ ++ A + + ++V + +YA G LL+
Sbjct: 727 TLLSICKIRQDVEIA-ELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQG 785
Query: 395 SVPIHDIISWNSIICGLAYHGY------AEKALELFE-------RMRLTDFKPDDITFVG 441
+ SW + + HG+ ++ EL+E M+L+ ++PD +FV
Sbjct: 786 RLKKEPGCSWIEVQSEM--HGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVE 843
Query: 442 V 442
V
Sbjct: 844 V 844
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 89/232 (38%), Gaps = 50/232 (21%)
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT-------VSNAMI 377
Q + +P TF+ V C+ GR+ A + VSN ++
Sbjct: 5 QQQPPPVAPARVTFSRVFQSCAQA-----GREALAAGRAAHARMVVSGFVPTAFVSNCLL 59
Query: 378 TM-------------------------------YARCGNIQSALLEFSSVPIHDIISWNS 406
M Y+ G+I +A+ F +P D++SWN+
Sbjct: 60 QMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNA 119
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNK 465
++ G G +++++LF M PD TF +L +CS + G + + +K
Sbjct: 120 LVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 179
Query: 466 YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ R+ + +VD+ G+ +D+A+ + E + WGA + C
Sbjct: 180 LEIDVRTG--SALVDMYGKCRSLDDALCFFYGMP----ERNWVSWGAAIAGC 225
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 215/738 (29%), Positives = 336/738 (45%), Gaps = 134/738 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I A LFD MP D V+WN ++ GY + G ++ LF +M R + T A L++S
Sbjct: 99 ISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKS 158
Query: 66 DN--------VQ-GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+ VQ A V G+E+ DV T ++++ Y +D+AL F+GMP ++ VS
Sbjct: 159 CSALEELSLGVQVHALAVKTGLEI-DVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVS 217
Query: 117 WNLVIGALVN-------------CQRMDLA------ESYFKEMGA--------------- 142
W I V QR+ L S F+ A
Sbjct: 218 WGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAI 277
Query: 143 -----RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
D T +V+ + + +AR+ F +P V+ N M+ G + G A
Sbjct: 278 KNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 337
Query: 198 LFQKM---------------------------------------HDRDLTSWKQLINGLV 218
LFQ M D D+ +++
Sbjct: 338 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 397
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRN-------------------------GL 253
+ + A F+ M + +WN+II+ L +N G
Sbjct: 398 KCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGS 457
Query: 254 VKEAHSYLEKYPY--------------SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
V +A + L Y S+ + V+ Y + G + A K+ + + +
Sbjct: 458 VLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQ 517
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
V WN ++ G N EE KFF +M + G PD+ TF +VL C++L T++LG+QIH
Sbjct: 518 VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHG 577
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
Q IK +S+ ++ MYA+CG++ +LL F V D +SWN++ICG A HG +
Sbjct: 578 QIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVE 637
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
AL +FERM+ + P+ TFV VL ACS+ GL D G YF M Y L+P+ H+ C+V
Sbjct: 638 ALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 697
Query: 480 DLLGRFGLIDEAMNLLNEI--RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
D+LGR EA+ +N + +AD + +W LL C+I ++++ E+A V+ L+
Sbjct: 698 DILGRSKGPQEAVKFINSMPFQADAV-----IWKTLLSICKIRQDVEIAELAASNVLLLD 752
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
P++S VY++L+ +Y G+ D R +K+ +KKEPGCSWI++ H FL GD +H
Sbjct: 753 PDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAH 812
Query: 598 PKFHRLRYLLNLLHTEIE 615
P+ L +LN L E++
Sbjct: 813 PRSGELYEMLNDLIGEMK 830
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 222/503 (44%), Gaps = 61/503 (12%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGA 71
+FD MP+RDTV+WN M+ Y G + A+ LF+ MP+ D+ ++N +++G Q Q +
Sbjct: 74 VFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQES 133
Query: 72 KEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRV-FHGMPLK-----DVVSWNLVI 121
++F M R D T+ ++ C+ L + +L V H + +K DV + + ++
Sbjct: 134 VDLFVEMARRGVSPDRTTFAVLLKS--CSALEELSLGVQVHALAVKTGLEIDVRTGSALV 191
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
C+ +D A +F M R+ SW + G V+ + V +LF +M +
Sbjct: 192 DMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQP 251
Query: 182 MIAGYLDN----GCVGVAEDLFQKMHDRDLTSWKQLINGLVN-----SRRIDAAISYFKQ 232
A + C+ L +S + + +V+ + DA ++F
Sbjct: 252 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFG- 310
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI----ASWTNVIV------GYFEM 282
+P +T N+++ L+R GL EA + S+I S + V GYF+
Sbjct: 311 LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG 370
Query: 283 GEVGS-AIK----------------------------VFELMTTRDVTVWNVMIFGLGEN 313
+V AIK +F+ M +D WN +I L +N
Sbjct: 371 QQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQN 430
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
++ + F +M G PD+ T+ SVL C+ L +L+ G +H + IK V+
Sbjct: 431 GHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVA 490
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
+ ++ MY +CG I A + ++SWN+I+ G + + +E+A + F M K
Sbjct: 491 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 550
Query: 434 PDDITFVGVLSACSYAGLVDQGR 456
PD TF VL C+ ++ G+
Sbjct: 551 PDHFTFATVLDTCANLATIELGK 573
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 139/611 (22%), Positives = 244/611 (39%), Gaps = 87/611 (14%)
Query: 26 VMIRGYFKNGFLDNAMC--------------LFNQMPERDMFTYNTVIAGLMQSDNVQGA 71
+++ G+ N F+ N + +F+ MP RD ++NT++ + ++ A
Sbjct: 43 MVVSGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 102
Query: 72 KEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMD 131
+FDGM DVV+WN+++SGY G+ E++ +F M + V L+
Sbjct: 103 VALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLL------ 156
Query: 132 LAESYFKEMGARDVASWTIMVNGL-VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
K A + S + V+ L V+ G + DV+ + ++ Y
Sbjct: 157 ------KSCSALEELSLGVQVHALAVKTGLEI------------DVRTGSALVDMYGKCR 198
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM---------PETCEKTW 241
+ A F M +R+ SW I G V + + + F +M P
Sbjct: 199 SLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFR 258
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
+ + G AH+ K+ + T ++ Y + + A + F + V
Sbjct: 259 SCAAMSCLNTGRQLHAHAIKNKFSSDRVVG-TAIVDVYAKANSLTDARRAFFGLPNHTVE 317
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
N M+ GL LG E + F M S D + + V + C++ G+Q+H A
Sbjct: 318 TSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLA 377
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
IK + V+NA++ +Y +C + A L F + D +SWN+II L +G+ + +
Sbjct: 378 IKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTI 437
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
F M KPDD T+ VL AC+ ++ G D + K L + + VVD+
Sbjct: 438 LHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVI-KSGLGSDAFVASTVVDM 496
Query: 482 LGRFGLIDEAMNLLNEIRAD-------------------------------GIEVSPTVW 510
+ G+IDEA L + I G++ +
Sbjct: 497 YCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTF 556
Query: 511 GALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
+L C I++G +I G+ + + ++ + L +MY CG D+ +F +
Sbjct: 557 ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEK--- 613
Query: 570 NGVKKEPGCSW 580
V+K SW
Sbjct: 614 --VEKRDFVSW 622
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 196/481 (40%), Gaps = 82/481 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
+ EA +F M Q+D+V+WN +I +NG D+ + FN+M + D FTY +V+
Sbjct: 402 LMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKA 461
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ + G+ V D V + + S D + V+
Sbjct: 462 ------CAALRSLEYGLMVHDKVIKSGLGS---------------------DAFVASTVV 494
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
C +D A+ +G + V SW +++G EA+K F +M ++ +
Sbjct: 495 DMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHF 554
Query: 182 MIAGYLDNGCVGVAE-DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK--QMP---- 234
A LD C +A +L +++H + + + L + ++S +D Y K MP
Sbjct: 555 TFATVLDT-CANLATIELGKQIHGQ-IIKQEMLDDEYISSTLVDM---YAKCGDMPDSLL 609
Query: 235 --ETCEK----TWNSIISVLIRNGLVKEAHSYLEKYPYSNI----ASWTNVIVGYFEMGE 284
E EK +WN++I +GL EA E+ N+ A++ V+ +G
Sbjct: 610 VFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGL 669
Query: 285 VGSAIKVFELMTTR-----DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ F LMTT + + M+ LG + +E +KF M D +
Sbjct: 670 FDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQA---DAVIWK 726
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA-----LLEFS 394
++L+IC +++ ++ A + + ++V + +YA G LL+
Sbjct: 727 TLLSICKIRQDVEIA-ELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQG 785
Query: 395 SVPIHDIISWNSIICGLAYHGY------AEKALELFE-------RMRLTDFKPDDITFVG 441
+ SW + + HG+ ++ EL+E M+L+ ++PD +FV
Sbjct: 786 RLKKEPGCSWIEVQSEM--HGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVE 843
Query: 442 V 442
V
Sbjct: 844 V 844
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 198/691 (28%), Positives = 325/691 (47%), Gaps = 101/691 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMI----------------RGYFKNGFLDNAMCLFN 45
R + A+ L D+MP R+ V+WN +I G + G + L +
Sbjct: 86 RAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLAS 145
Query: 46 QMP-----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
+ + ++F N ++ + V+ A +FDGM +
Sbjct: 146 VLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPN 205
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGM--------PLK----------------DVVS-- 116
V++ +M+ G V G +D+ALR+F M P+ DVV
Sbjct: 206 EVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAF 265
Query: 117 ---------------------WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGL 155
N +I C +MD A F + SW I++ G
Sbjct: 266 RLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGF 325
Query: 156 VREGRIVEARKLFDKMPAKDVQ----AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
+ G +A ++ + M + ++ M+A + V A +F K+ +T+W
Sbjct: 326 GQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVTTWN 385
Query: 212 QLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIRNGLV---KEAHSYLEKY 264
L++G + F++M + T I+S R G++ + HS ++
Sbjct: 386 TLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRF 445
Query: 265 PYSN-IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
N + + ++ Y + G++G A +F MT RDV WN MI GL + L EE FF
Sbjct: 446 LLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFF 505
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
QM+ +G P +++ S++ C+ L ++ GRQIHAQ +K +Q V +A+I MYA+C
Sbjct: 506 KQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKC 565
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
GN+ A + F + +I++WN +I G A +G+ EKA++LFE M T+ +PD +TF+ VL
Sbjct: 566 GNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVL 625
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
+ CS++GLVD+ +F+ M++ Y + P + HYTC++D LGR G + E L++ +
Sbjct: 626 TGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPC--- 682
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI 563
+ P VW LL AC +H+N ++GE A + + L+P N Y++L+ +Y S GR DA +
Sbjct: 683 KDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLLSNIYASLGRHGDASGV 742
Query: 564 FAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
A M GV K G SWI DG H F+ D
Sbjct: 743 RALMSSRGVVKGRGYSWIDHKDGVHAFMVAD 773
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N ++ + +GL +A P N S+ + G++ +A + + M R+V
Sbjct: 47 NRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVV 106
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN +I L ++ E L+ + M G P + T SVL+ C + LD GR+ H A
Sbjct: 107 SWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLA 166
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
+K+ ++ V NA++ MY +CG ++ A+ F + + +S+ +++ GL G + AL
Sbjct: 167 VKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDAL 226
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYA 449
LF RM + + D + VL +C+ A
Sbjct: 227 RLFARMCRSGVRVDPVAVSSVLGSCAQA 254
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
NA ++ R G++ +A +P +++SWN++I LA A +ALEL+E M
Sbjct: 78 NAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLV 137
Query: 434 PDDITFVGVLSACSYAGLVDQGR-----------------------YYFDC--MKNKYFL 468
P T VLSAC +D GR Y C +++ L
Sbjct: 138 PTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRL 197
Query: 469 -----QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
P +T ++ L + G +D+A+ L + G+ V P ++LG+C
Sbjct: 198 FDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSC 251
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 276/514 (53%), Gaps = 14/514 (2%)
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
+D N I AL RMD A + +M +V + M+ G V+ + V+A +L+ +M
Sbjct: 12 QDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQM 71
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLF-QKMH--------DRDLTSWKQLINGLVNSRR 222
+V + L C V++ F + +H D + L++ + R
Sbjct: 72 LRANVSPTSYTFPS-LIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGR 130
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
I+ ++ F +MPE W +++S L+R G + A + P N+A+W +I GY +
Sbjct: 131 IEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARL 190
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
EV A +F M RD+ W MI +N E L F +M + G SPD T +V+
Sbjct: 191 REVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVI 250
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
+ C+ L LDLG++IH ++ N + +A+I MYA+CG++ +LL F + ++
Sbjct: 251 SACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLF 310
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
WNS+I GLA HGYAE+AL +F++M KP+ +TFV VLSAC++AGL+++GR F M
Sbjct: 311 CWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASM 370
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
+ + P HY C+VDLL + GL++EA+ L IR +E + +WGALL C++H N
Sbjct: 371 TRDHSIPPGVEHYGCMVDLLSKAGLLEEALQL---IRTMKLEPNAVIWGALLSGCKLHRN 427
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE-PGCSWI 581
+++ ++A ++M LEP NSG Y +L M R +A +I MKE GV+K PG SWI
Sbjct: 428 LEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEKRCPGSSWI 487
Query: 582 QINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
++ H F + D SH + LL L +++
Sbjct: 488 EMESQVHQFAASDKSHAASDEIYSLLAELDGQMK 521
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 220/504 (43%), Gaps = 86/504 (17%)
Query: 50 RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
+D + N I+ L + + A + ME+ +V +N+MI G+V + +AL ++ M
Sbjct: 12 QDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQM 71
Query: 110 PLKDVVSWNLVIGALVNC----QRMDLAES------------------------------ 135
+V + +L+ ++ AE+
Sbjct: 72 LRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRI 131
Query: 136 -----YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
F EM RDV +WT MV+GLVR G + A +LFD MP +++ WN +I GY
Sbjct: 132 EESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLR 191
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIIS 246
V VAE LF +M RD+ SW +IN ++R A+ F +M + E T ++IS
Sbjct: 192 EVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVIS 251
Query: 247 VLIRNG---LVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
G L KE H Y+ ++ ++ ++ + +I Y + G + ++ +F + +++
Sbjct: 252 ACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFC 311
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
WN +I GL + EE L F +M+ P+ TF SVL+ C+ HA I
Sbjct: 312 WNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACN-----------HAGLI 360
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
+ R +F +++ S+P + + ++ L+ G E+AL+
Sbjct: 361 EEGRKRFASMTRD------------------HSIP-PGVEHYGCMVDLLSKAGLLEEALQ 401
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF-LQP-RSAHYTCVVD 480
L M+L +P+ + + +LS C + + NK L+P S +YT +V+
Sbjct: 402 LIRTMKL---EPNAVIWGALLSGCK----LHRNLEIAQVAANKLMVLEPGNSGYYTLLVN 454
Query: 481 LLGRFGLIDEAMNLLNEIRADGIE 504
+ EA + ++ G+E
Sbjct: 455 MNAEVNRWGEAAKIRLTMKEQGVE 478
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 140/272 (51%), Gaps = 21/272 (7%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
RI+E+ +FD+MP+RD W M+ G + G + +A LF+ MP+R++ T+NT+I G +
Sbjct: 130 RIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYAR 189
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNL 119
V A+ +F+ M RD+++W +MI+ Y N EAL VF HG+ D V+
Sbjct: 190 LREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGIS-PDEVTMAT 248
Query: 120 VIGALVNCQRMDLAES---YFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
VI A + +DL + Y + G DV + +++ + G + + +F K+ K+
Sbjct: 249 VISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKN 308
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL----TSWKQLIN-----GLVNS-RRIDA 225
+ WN +I G +G A +F KM + ++ +++ GL+ R+ A
Sbjct: 309 LFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFA 368
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
+++ +P E + ++ +L + GL++EA
Sbjct: 369 SMTRDHSIPPGVEH-YGCMVDLLSKAGLLEEA 399
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 119/238 (50%), Gaps = 12/238 (5%)
Query: 31 YFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMI 90
Y G ++ ++ +F++MPERD+F + T+++GL++ ++ A +FD M R++ TWN++I
Sbjct: 125 YSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLI 184
Query: 91 SGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG----ARDVA 146
GY +D A +F+ MP +D++SW +I +R A F EM + D
Sbjct: 185 DGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEV 244
Query: 147 SWTIMVNGLVREGRIVEARKLFDKMPAK----DVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
+ +++ G + +++ + DV + +I Y G + + +F K+
Sbjct: 245 TMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKL 304
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKE 256
+++L W +I GL + A++ F +M K T+ S++S GL++E
Sbjct: 305 REKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEE 362
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 10/186 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + A LFD MP R+ TWN +I GY + +D A LFNQMP RD+ ++ T+I
Sbjct: 157 VRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMIN 216
Query: 61 GLMQSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVF-----HGMPL 111
Q+ + A VF+ M D VT ++IS G +D + HG L
Sbjct: 217 CYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNL 276
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
DV + +I C +D + F ++ +++ W ++ GL G EA +FDKM
Sbjct: 277 -DVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKM 335
Query: 172 PAKDVQ 177
+ ++
Sbjct: 336 EREKIK 341
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 28/221 (12%)
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
++A +K NQ + N I+ + + A+L ++ + I ++ +N++I G
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY--------YFDCMKNKYFL 468
+ALEL+ +M + P TF ++ AC GLV Q R+ + + + F+
Sbjct: 61 PVQALELYVQMLRANVSPTSYTFPSLIKAC---GLVSQLRFAEAVHGHVWRNGFDSHVFV 117
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
Q T +VD G I+E++ + +E+ + T+ L ++VG++
Sbjct: 118 Q------TSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGL---------VRVGDM 162
Query: 529 AGE-RVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ R+ ++ P+ N + L + Y + A+ +F QM
Sbjct: 163 SSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQM 203
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 193/642 (30%), Positives = 340/642 (52%), Gaps = 31/642 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYN 56
M+ +++ + +F+ MP+R+ VTW ++ GY + + M LF +M + FT+
Sbjct: 146 MKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFT 205
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+V++ + V + V V+ V NS+I+ Y GL++EA VF M
Sbjct: 206 SVLSAVASQGAVDLGRRVH-AQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMET 264
Query: 112 KDVVSWN-LVIGALVNCQRMDLAESYF---KEMGARDVASWTIMVNGLVREGRIVEARKL 167
+D+VSWN L+ G L+N +++ + + M ++++ ++ ++ AR+L
Sbjct: 265 RDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQL 324
Query: 168 FDKMPAKDVQA-WNLMIA---GYLDNGCVGVAEDLFQKMH-DRDLTSWKQLINGLVNSRR 222
+ + N+M A Y G + A ++F M +++ SW +I G + +
Sbjct: 325 HSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNAD 384
Query: 223 IDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS-WTNVIV 277
I A + F +M E K T++++++ I L+ + H+ + K Y + S T ++
Sbjct: 385 IPLAAALFSRMREDNVKPNEFTYSTVLTASIPI-LLPQIHAQIIKTNYQHAPSVGTALLA 443
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y ++G A+ +F+++ +DV W+ M+ + + F++M G P+ T
Sbjct: 444 SYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFT 503
Query: 338 FTSVLTICSDLPT--LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
+S + C+ PT +D GRQ HA +IK V +A++TMYAR G+I SA + F
Sbjct: 504 ISSAIDACAS-PTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFER 562
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
D++SWNS+I G A HGY+++AL+ F +M + D TF+ V+ C++AGLV +G
Sbjct: 563 QTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEG 622
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
+ YFD M + + P HY+C+VDL R G +DE MNL+ + VW LLG
Sbjct: 623 QQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMP---FPAGAMVWRTLLG 679
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
ACR+H N+++G++A ++++ LEP++S Y++L+ +Y + GR ++ + M VKKE
Sbjct: 680 ACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKE 739
Query: 576 PGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
GCSWIQI + H F++ D SHP ++ L + T +++E
Sbjct: 740 AGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQE 781
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 132/518 (25%), Positives = 235/518 (45%), Gaps = 44/518 (8%)
Query: 9 AQNLFDKMPQRDTVTWN----VMIRGYFKNG---------FLDNAMCLFNQMPERDMFTY 55
A+ D MP RD + V I Y + G F+D C Q +
Sbjct: 48 ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCGRVQGAA---VSR 104
Query: 56 NTVIAGLMQSDNVQGAKE----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+ GL+ D V G + V G + +V +++ Y+ G +++ VF GMP
Sbjct: 105 VLKVCGLI-PDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPK 163
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNGLVREGRIVEARKL 167
++VV+W ++ V + + F M A V ++T +++ + +G + R++
Sbjct: 164 RNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRV 223
Query: 168 FDKMPA----KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
+ V N +I Y G V A+ +F++M RD+ SW L+ GL+ +
Sbjct: 224 HAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQ 283
Query: 224 DAAISYFK----QMPETCEKTWNSIISV---LIRNGLVKEAHSYLEKYPY-SNIASWTNV 275
A+ F M + + T++++I + L + L ++ HS + K+ + S+ T +
Sbjct: 284 LEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAI 343
Query: 276 IVGYFEMGEVGSAIKVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+ Y + GE+ A +F LM +++V W MI G +N F +M+E P+
Sbjct: 344 MDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPN 403
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
T+++VLT + +P L QIHAQ IK +V A++ Y++ GN + AL F
Sbjct: 404 EFTYSTVLT--ASIPILL--PQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFK 459
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC-SYAGLVD 453
+ D+++W++++ + G + A +F +M + KP++ T + AC S +D
Sbjct: 460 MIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGID 519
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
QGR F + KY Q + +V + R G ID A
Sbjct: 520 QGR-QFHAISIKYRYQDAICVGSALVTMYARKGSIDSA 556
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 137/287 (47%), Gaps = 6/287 (2%)
Query: 264 YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
+ + + T ++ Y + G V VFE M R+V W ++ G + + + F
Sbjct: 130 FDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALF 189
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
+M+ G P+ TFTSVL+ + +DLGR++HAQ++K V N++I MY++C
Sbjct: 190 FRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKC 249
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G ++ A F + D++SWN+++ GL + + +AL+LF R + K T+ V+
Sbjct: 250 GLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVI 309
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
C+ + R C+ K+ T ++D + G +D+A N+ +
Sbjct: 310 KLCANLKQLALARQLHSCVL-KHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQN 368
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYLILT 548
VS W A++G C + +I + R+ E ++PN +LT
Sbjct: 369 VVS---WTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLT 412
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 142/365 (38%), Gaps = 46/365 (12%)
Query: 243 SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
S + VL+R L+ P S +AS + + A + + M +RD
Sbjct: 5 SSLPVLLRGKHAAAVFGSLK--PLSALASAARLEDDCADTCNAPGARQALDGMPSRDAAA 62
Query: 303 WN----VMIFGLGENDLGE-EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
+ V I G G E L FV + G A + VL +C +P G Q+
Sbjct: 63 GSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCG-RVQGAAVSRVLKVCGLIPDRVSGEQL 121
Query: 358 HAQAIKIARNQFTT-VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
H +K ++ V A++ MY +CG ++ + F +P ++++W S++ G
Sbjct: 122 HCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRA 181
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
+ LF RMR P+ TF VLSA + G VD GR RS +
Sbjct: 182 CSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVH---AQSVKFGCRSTVFV 238
Query: 477 C--VVDLLGRFGLID-------------------------------EAMNLLNEIRADGI 503
C ++++ + GL++ EA+ L ++ RA
Sbjct: 239 CNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMA 298
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG-VYLILTEMYLSCGRREDAKR 562
++S + + ++ C + + V++ ++ G V + + Y CG +DA
Sbjct: 299 KLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFN 358
Query: 563 IFAQM 567
IF M
Sbjct: 359 IFLLM 363
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 215/738 (29%), Positives = 336/738 (45%), Gaps = 134/738 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I A LFD MP D V+WN ++ GY + G ++ LF +M R + T A L++S
Sbjct: 141 ISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKS 200
Query: 66 DN--------VQ-GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+ VQ A V G+E+ DV T ++++ Y +D+AL F+GMP ++ VS
Sbjct: 201 CSALEELSLGVQVHALAVKTGLEI-DVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVS 259
Query: 117 WNLVIGALVN-------------CQRMDLA------ESYFKEMGA--------------- 142
W I V QR+ L S F+ A
Sbjct: 260 WGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAI 319
Query: 143 -----RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
D T +V+ + + +AR+ F +P V+ N M+ G + G A
Sbjct: 320 KNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 379
Query: 198 LFQKM---------------------------------------HDRDLTSWKQLINGLV 218
LFQ M D D+ +++
Sbjct: 380 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 439
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRN-------------------------GL 253
+ + A F+ M + +WN+II+ L +N G
Sbjct: 440 KCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGS 499
Query: 254 VKEAHSYLEKYPY--------------SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
V +A + L Y S+ + V+ Y + G + A K+ + + +
Sbjct: 500 VLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQ 559
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
V WN ++ G N EE KFF +M + G PD+ TF +VL C++L T++LG+QIH
Sbjct: 560 VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHG 619
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
Q IK +S+ ++ MYA+CG++ +LL F V D +SWN++ICG A HG +
Sbjct: 620 QIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVE 679
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
AL +FERM+ + P+ TFV VL ACS+ GL D G YF M Y L+P+ H+ C+V
Sbjct: 680 ALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 739
Query: 480 DLLGRFGLIDEAMNLLNEI--RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
D+LGR EA+ +N + +AD + +W LL C+I ++++ E+A V+ L+
Sbjct: 740 DILGRSKGPQEAVKFINSMPFQADAV-----IWKTLLSICKIRQDVEIAELAASNVLLLD 794
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
P++S VY++L+ +Y G+ D R +K+ +KKEPGCSWI++ H FL GD +H
Sbjct: 795 PDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAH 854
Query: 598 PKFHRLRYLLNLLHTEIE 615
P+ L +LN L E++
Sbjct: 855 PRSGELYEMLNDLIGEMK 872
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 222/503 (44%), Gaps = 61/503 (12%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGA 71
+FD MP+RDTV+WN M+ Y G + A+ LF+ MP+ D+ ++N +++G Q Q +
Sbjct: 116 VFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQES 175
Query: 72 KEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRV-FHGMPLK-----DVVSWNLVI 121
++F M R D T+ ++ C+ L + +L V H + +K DV + + ++
Sbjct: 176 VDLFVEMARRGVSPDRTTFAVLLKS--CSALEELSLGVQVHALAVKTGLEIDVRTGSALV 233
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
C+ +D A +F M R+ SW + G V+ + V +LF +M +
Sbjct: 234 DMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQP 293
Query: 182 MIAGYLDN----GCVGVAEDLFQKMHDRDLTSWKQLINGLVN-----SRRIDAAISYFKQ 232
A + C+ L +S + + +V+ + DA ++F
Sbjct: 294 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFG- 352
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI----ASWTNVIV------GYFEM 282
+P +T N+++ L+R GL EA + S+I S + V GYF+
Sbjct: 353 LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG 412
Query: 283 GEVGS-AIK----------------------------VFELMTTRDVTVWNVMIFGLGEN 313
+V AIK +F+ M +D WN +I L +N
Sbjct: 413 QQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQN 472
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
++ + F +M G PD+ T+ SVL C+ L +L+ G +H + IK V+
Sbjct: 473 GHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVA 532
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
+ ++ MY +CG I A + ++SWN+I+ G + + +E+A + F M K
Sbjct: 533 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 592
Query: 434 PDDITFVGVLSACSYAGLVDQGR 456
PD TF VL C+ ++ G+
Sbjct: 593 PDHFTFATVLDTCANLATIELGK 615
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 138/598 (23%), Positives = 241/598 (40%), Gaps = 73/598 (12%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N +++ Y + A +F+ MP RD ++NT++ + ++ A +FDGM DVV
Sbjct: 98 NCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVV 157
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
+WN+++SGY G+ E++ +F M + V L+ K A +
Sbjct: 158 SWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLL------------KSCSALE 205
Query: 145 VASWTIMVNGL-VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
S + V+ L V+ G + DV+ + ++ Y + A F M
Sbjct: 206 ELSLGVQVHALAVKTGLEI------------DVRTGSALVDMYGKCRSLDDALCFFYGMP 253
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQM---------PETCEKTWNSIISVLIRNGLV 254
+R+ SW I G V + + + F +M P + + G
Sbjct: 254 ERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQ 313
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
AH+ K+ + T ++ Y + + A + F + V N M+ GL
Sbjct: 314 LHAHAIKNKFSSDRVVG-TAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAG 372
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
LG E + F M S D + + V + C++ G+Q+H AIK + V+N
Sbjct: 373 LGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNN 432
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
A++ +Y +C + A L F + D +SWN+II L +G+ + + F M KP
Sbjct: 433 AVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKP 492
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
DD T+ VL AC+ ++ G D + K L + + VVD+ + G+IDEA L
Sbjct: 493 DDFTYGSVLKACAALRSLEYGLMVHDKVI-KSGLGSDAFVASTVVDMYCKCGIIDEAQKL 551
Query: 495 LNEIRAD-------------------------------GIEVSPTVWGALLGACRIHNNI 523
+ I G++ + +L C I
Sbjct: 552 HDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATI 611
Query: 524 KVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
++G +I G+ + + ++ + L +MY CG D+ +F + V+K SW
Sbjct: 612 ELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEK-----VEKRDFVSW 664
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 196/481 (40%), Gaps = 82/481 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
+ EA +F M Q+D+V+WN +I +NG D+ + FN+M + D FTY +V+
Sbjct: 444 LMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKA 503
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ + G+ V D V + + S D + V+
Sbjct: 504 ------CAALRSLEYGLMVHDKVIKSGLGS---------------------DAFVASTVV 536
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
C +D A+ +G + V SW +++G EA+K F +M ++ +
Sbjct: 537 DMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHF 596
Query: 182 MIAGYLDNGCVGVAE-DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK--QMP---- 234
A LD C +A +L +++H + + + L + ++S +D Y K MP
Sbjct: 597 TFATVLDT-CANLATIELGKQIHGQ-IIKQEMLDDEYISSTLVDM---YAKCGDMPDSLL 651
Query: 235 --ETCEK----TWNSIISVLIRNGLVKEAHSYLEKYPYSNI----ASWTNVIVGYFEMGE 284
E EK +WN++I +GL EA E+ N+ A++ V+ +G
Sbjct: 652 VFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGL 711
Query: 285 VGSAIKVFELMTTR-----DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ F LMTT + + M+ LG + +E +KF M D +
Sbjct: 712 FDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQA---DAVIWK 768
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA-----LLEFS 394
++L+IC +++ ++ A + + ++V + +YA G LL+
Sbjct: 769 TLLSICKIRQDVEIA-ELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQG 827
Query: 395 SVPIHDIISWNSIICGLAYHGY------AEKALELFE-------RMRLTDFKPDDITFVG 441
+ SW + + HG+ ++ EL+E M+L+ ++PD +FV
Sbjct: 828 RLKKEPGCSWIEVQSEM--HGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVE 885
Query: 442 V 442
V
Sbjct: 886 V 886
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 89/232 (38%), Gaps = 50/232 (21%)
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT-------VSNAMI 377
Q + +P TF+ V C+ GR+ A + VSN ++
Sbjct: 47 QQQPPPVAPARVTFSRVFQSCAQA-----GREALAAGRAAHARMVVSGFVPTAFVSNCLL 101
Query: 378 TM-------------------------------YARCGNIQSALLEFSSVPIHDIISWNS 406
M Y+ G+I +A+ F +P D++SWN+
Sbjct: 102 QMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNA 161
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNK 465
++ G G +++++LF M PD TF +L +CS + G + + +K
Sbjct: 162 LVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 221
Query: 466 YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ R+ + +VD+ G+ +D+A+ + E + WGA + C
Sbjct: 222 LEIDVRTG--SALVDMYGKCRSLDDALCFFYGMP----ERNWVSWGAAIAGC 267
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 195/687 (28%), Positives = 330/687 (48%), Gaps = 101/687 (14%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-------------------- 48
A+ L D+ + D V+W+ +I GY +NG A+ F++M
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI 169
Query: 49 -------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
E D+F NT++ + D +K +FD + R+VV+WN++
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNAL 229
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC-------QRMDLAESYFKEMGA 142
S YV EA+ +F+ M L + + ++VN R + Y ++G
Sbjct: 230 FSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGY 289
Query: 143 R-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG---------------- 185
D S +V+ + G + +A +F+K+ D+ +WN +IAG
Sbjct: 290 DWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQ 349
Query: 186 ------------------YLDNGCVGV---------AEDLFQKMHDRDLTSWKQLINGLV 218
++ G V + A F + ++DL +W +I+G
Sbjct: 350 MKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYS 409
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG-------LVKEAHSYLEKYPY-SNIA 270
A+S F +M + + +S ++++ + ++ H K + S+I
Sbjct: 410 QYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIY 469
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
++I Y + V A ++FE T D+ + MI + GEE LK F++M++
Sbjct: 470 VVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDME 529
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
PD +S+L C++L + G+Q+H +K N+++ MYA+CG+I A
Sbjct: 530 LKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAG 589
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
FS + I+SW+++I GLA HG+ +AL+LF +M P+ IT V VL AC++AG
Sbjct: 590 RAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAG 649
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
LV + + YF+ M+ + +P HY C++DLLGR G I+EA+ L+N++ E + +VW
Sbjct: 650 LVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMP---FEANASVW 706
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
GALLGA RIH ++++G A E + LEP SG +++L +Y S G+ E+ + M+++
Sbjct: 707 GALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDS 766
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSH 597
VKKEPG SWI++ D + FL GD SH
Sbjct: 767 KVKKEPGMSWIEVKDKVYTFLVGDRSH 793
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 187/413 (45%), Gaps = 26/413 (6%)
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+ D N +I Y G A L + + DL SW LI+G + A+ F +
Sbjct: 88 SDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHE 147
Query: 233 MP----ETCEKTWNSII---SVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGE 284
M + E T++S++ S++ + K+ H + + ++ ++V Y + E
Sbjct: 148 MHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDE 207
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+ ++F+ + R+V WN + + D E + F +M SG P+ + +S++
Sbjct: 208 FLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNA 267
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
C+ L G+ IH IK+ + +NA++ MYA+ G++ A+ F + DI+SW
Sbjct: 268 CTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSW 327
Query: 405 NSIICGLAYHGYAEKALELFERMRLT--------DFKPDDITFVGVLSACSYAGLVDQGR 456
N++I G H + E+ALEL +M+ D + D VG++ S L++ R
Sbjct: 328 NAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDAR 387
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
F+ + K + + ++ ++ EA++L E+ +GI + T +L +
Sbjct: 388 MAFNLLPEKDLIA-----WNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKS 442
Query: 517 CRIHNNIKVG-EIAGERVMELEPNNSGVYLI--LTEMYLSCGRREDAKRIFAQ 566
+ V ++ G V +S +Y++ L + Y C EDA+RIF +
Sbjct: 443 TAGLQVVHVCRQVHGLSVK--SGFHSDIYVVNSLIDSYGKCSHVEDAERIFEE 493
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 168/358 (46%), Gaps = 30/358 (8%)
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGE 284
++SY K + + C T S+ R GL + H+++ K S+ S N ++ Y +
Sbjct: 56 SVSYSKLLSQCC--TTKSL-----RPGL--QIHAHITKSGLSDDPSIRNHLINLYSKCRX 106
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
G A K+ + + D+ W+ +I G +N LG L F +M G + TF+SVL
Sbjct: 107 FGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKA 166
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
CS + L +G+Q+H + V+N ++ MYA+C + F +P +++SW
Sbjct: 167 CSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSW 226
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR---YYFDC 461
N++ + +A+ LF M L+ KP++ + +++AC+ GL D R +
Sbjct: 227 NALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT--GLRDSSRGKIIHGYL 284
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
+K Y P SA +VD+ + G + +A+++ +I+ I W A++ C +H
Sbjct: 285 IKLGYDWDPFSA--NALVDMYAKVGDLADAISVFEKIKQPDI----VSWNAVIAGCVLHE 338
Query: 522 NIKVG-EIAGERVMELEP--------NNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
+ + E+ G+ +L ++ V + L +MY C EDA+ F + E
Sbjct: 339 HHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEK 396
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 97/462 (20%), Positives = 182/462 (39%), Gaps = 87/462 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------ERDMF 53
+ +A ++F+K+ Q D V+WN +I G + + A+ L QM E D+F
Sbjct: 309 LADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLF 368
Query: 54 TYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
++ + D ++ A+ F+ + +D++ WN++ISGY EAL +F M +
Sbjct: 369 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEG 428
Query: 114 V----VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEAR 165
+ + + ++ + Q + + S +VN L+ + + +A
Sbjct: 429 IGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAE 488
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
++F++ D+ ++ MI Y G A LF +M D +L + + + L+N+ +
Sbjct: 489 RIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLS 548
Query: 226 AISYFKQMPETCEK--------TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
A KQ+ K NS++++ + G + +A + I SW+ +I
Sbjct: 549 AFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIG 608
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
G + G G + L+ F QM + G SP++ T
Sbjct: 609 GLAQHGH-------------------------------GRQALQLFNQMLKEGVSPNHIT 637
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN------------AMITMYARCGN 385
SVL C+ HA + A+ F ++ MI + R G
Sbjct: 638 LVSVLGACN-----------HAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGK 686
Query: 386 IQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELFER 426
I A+ + +P S W +++ H K +EL R
Sbjct: 687 INEAVELVNKMPFEANASVWGALLGAARIH----KDVELGRR 724
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 49/278 (17%)
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA-- 389
+P + +++ +L+ C +L G QIHA K + ++ N +I +Y++C A
Sbjct: 53 TPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARK 112
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
L++ SS P D++SW+++I G A +G AL F M L K ++ TF VL ACS
Sbjct: 113 LVDESSEP--DLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIV 170
Query: 450 ----------GLVDQGRYYFDCM----------KNKYFLQPR--------------SAHY 475
G+V + D K FL + +A +
Sbjct: 171 KDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALF 230
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
+C V + EA+ L E+ GI+ + +++ AC + G+I +++
Sbjct: 231 SCYV----QXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIK 286
Query: 536 L----EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
L +P ++ L +MY G DA +F ++K+
Sbjct: 287 LGYDWDPFSANA---LVDMYAKVGDLADAISVFEKIKQ 321
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 194/641 (30%), Positives = 317/641 (49%), Gaps = 81/641 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIA---- 60
A+++F M QRD VT+N +I G + G+ + AM LF +M E D T +++
Sbjct: 325 AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSS 384
Query: 61 -----------------GLMQSDNVQGAK--------------EVFDGMEVRDVVTWNSM 89
G +D ++GA F EV +VV WN M
Sbjct: 385 DGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVM 444
Query: 90 ISGYVCNGLIDE---ALRVFHGMPLKDVV----SWNLVIGALVNCQRMDLAESYFKEMGA 142
+ Y GL+D+ + R+F M ++++V ++ ++ + ++L E ++
Sbjct: 445 LVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 501
Query: 143 R----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+ +++++ + G++ A + + KDV +W MIAGY A
Sbjct: 502 TSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 561
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
F++M DR + S + GL N+ A + K+ + + S S
Sbjct: 562 FRQMLDRGIRSDEV---GLTNAVSACAGLQALKEGQQIHAQACVSGFS------------ 606
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
P+ N ++ Y + G + A FE D WN ++ G ++ EE
Sbjct: 607 ---SDLPFQNA-----LVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEE 658
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L+ F +M G +N TF S + S+ + G+Q+HA K + T V NA+I+
Sbjct: 659 ALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIIS 718
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MYA+CG+I A +F + + + +SWN++I + HG+ +AL+ F++M ++ +P+ +T
Sbjct: 719 MYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 778
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
VGVLSACS+ GLVD+G YF+ M +Y L P+ HY CVVD+L R GL+ A + + E+
Sbjct: 779 LVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEM 838
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
IE VW LL AC +H N+++GE A ++ELEP +S Y++L+ +Y C R+
Sbjct: 839 ---PIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVC-RKW 894
Query: 559 DAKRIFAQ-MKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
DA+ + Q MKE GVKKEPG SWI++ + H F GD +HP
Sbjct: 895 DARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHP 935
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 145/620 (23%), Positives = 267/620 (43%), Gaps = 66/620 (10%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A +FD+MP+R TWN MI+ CLF +M ++ +G++++
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEA--C 179
Query: 69 QGAKEVFDGMEV-----------RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+G FD +E + + N +I Y NG +D A RVF G+ LKD SW
Sbjct: 180 RGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSW 239
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP----- 172
+I L + A F +M + + ++ + +E+ ++ +++
Sbjct: 240 VAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 299
Query: 173 ---AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+ D N +++ Y G + AE +F M RD ++ LINGL + A+
Sbjct: 300 LGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 359
Query: 230 FKQMP----ETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFE 281
FK+M E T S++ +G + ++ H+Y K +++ ++ Y +
Sbjct: 360 FKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAK 419
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
++ +A+ F +V +WNVM+ G D + F QM+ P+ T+ S+
Sbjct: 420 CSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 479
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA---LLEFSSVPI 398
L C L L+LG QIH+Q IK + V + +I MYA+ G + +A L+ F+
Sbjct: 480 LKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG--- 536
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-- 456
D++SW ++I G + + +KAL F +M + D++ +SAC+ + +G+
Sbjct: 537 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 596
Query: 457 ---------------------YYFDC--MKNKY--FLQPRSAH---YTCVVDLLGRFGLI 488
Y C ++ Y F Q + + +V + G
Sbjct: 597 HAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNN 656
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL-EPNNSGVYLIL 547
+EA+ + + +GI+ + +G+ + A N+K G+ + + + + V +
Sbjct: 657 EEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAI 716
Query: 548 TEMYLSCGRREDAKRIFAQM 567
MY CG DAK+ F ++
Sbjct: 717 ISMYAKCGSISDAKKQFLEL 736
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 134/509 (26%), Positives = 232/509 (45%), Gaps = 54/509 (10%)
Query: 17 PQRDTVTWNVMIRGYFK-NGFLDNAMCLFNQMPERDMFTYNTVIAG------LMQSDNVQ 69
P T+ W ++ G K NG LD L +Q+ + F N ++ L + D +
Sbjct: 65 PNHQTLKW--LLEGCLKTNGSLDEGRKLHSQILKLG-FDNNACLSEKLLDFYLFKGD-LD 120
Query: 70 GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-SWNLVIGALVNCQ 128
GA +VFD M R + TWN MI L + +F M ++V + G L C+
Sbjct: 121 GALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACR 180
Query: 129 RMDLAESYFKEMGAR----DVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWN 180
+A +++ AR + TI+ N L+ R G + AR++FD + KD +W
Sbjct: 181 GGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWV 240
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MI+G N C A LF M+ + G++ + F + C+K
Sbjct: 241 AMISGLSKNECEVEAIRLFCDMY----------VLGIMPTPYA------FSSVLSACKK- 283
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRD 299
I S+ I L H + K +S+ N +V YF +G + SA +F M+ RD
Sbjct: 284 ---IESLEIGEQL----HGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRD 336
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
+N +I GL + GE+ ++ F +M+ G PD+ T S++ CS TL G+Q+HA
Sbjct: 337 AVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHA 396
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
K+ + A++ +YA+C +I++AL F + +++ WN ++
Sbjct: 397 YTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRN 456
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNKYFLQPRSAHYTC- 477
+ +F +M++ + P+ T+ +L C G ++ G + + +K + L Y C
Sbjct: 457 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNA----YVCS 512
Query: 478 -VVDLLGRFGLIDEAMNLLNEIRADGIEV 505
++D+ + G +D A ++L IR G +V
Sbjct: 513 VLIDMYAKLGKLDTAWDIL--IRFAGKDV 539
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 138/547 (25%), Positives = 241/547 (44%), Gaps = 37/547 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
RN + A+ +FD + +D +W MI G KN A+ LF M + + +++
Sbjct: 217 RNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSS 276
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V++ + ++++ E G+ ++ D N+++S Y G + A +F M +
Sbjct: 277 VLSACKKIESLE-IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQR 335
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMG----ARDVASWTIMVNGLVREGRIVEARKLF 168
D V++N +I L C + A FK M D + +V +G + ++L
Sbjct: 336 DAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQL- 394
Query: 169 DKMPAKDVQAWNLMIAGYLDN---GC--VGVAEDLFQKMHDRDLTSWK------QLINGL 217
K A N I G L N C + A + F + ++ W L++ L
Sbjct: 395 HAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDL 454
Query: 218 VNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTN 274
NS RI + + +P + T+ SI+ IR G L ++ HS + K + A +
Sbjct: 455 RNSFRIFRQMQIEEIVPN--QYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCS 512
Query: 275 VIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
V++ Y ++G++ +A + +DV W MI G + + ++ L F QM + G
Sbjct: 513 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 572
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D T+ ++ C+ L L G+QIHAQA + NA++T+Y++CGNI+ A L F
Sbjct: 573 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAF 632
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
D I+WN+++ G G E+AL +F RM ++ TF + A S +
Sbjct: 633 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMK 692
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
QG+ + K + ++ + + G I +A E+ EVS W A+
Sbjct: 693 QGKQVHAVI-TKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKN-EVS---WNAM 747
Query: 514 LGACRIH 520
+ A H
Sbjct: 748 INAYSKH 754
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 201/434 (46%), Gaps = 53/434 (12%)
Query: 158 EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL 217
+G + A K+FD+MP + + WN MI G LF +M + ++T + +G+
Sbjct: 116 KGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGV 175
Query: 218 VNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
+ + R ++++ I + +I GL K S + P ++
Sbjct: 176 LEACR-GGSVAF---------DVVEQIHARIIYQGLGK---STIVCNPLIDL-------- 214
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y G V A +VF+ + +D + W MI GL +N+ E ++ F M G P
Sbjct: 215 -YSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYA 273
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F+SVL+ C + +L++G Q+H +K+ + T V NA++++Y G++ SA FS++
Sbjct: 274 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMS 333
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR- 456
D +++N++I GL+ GY EKA+ELF+RM+L +PD T ++ ACS G + G+
Sbjct: 334 QRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQ 393
Query: 457 ----------------------YYFDCMKNK----YFLQPRSAHYTCVVDLLGRFGLIDE 490
Y C + YFL+ + +L +GL+D+
Sbjct: 394 LHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDD 453
Query: 491 AMNLLNEIRADGI-EVSPT--VWGALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLI 546
N R I E+ P + ++L C ++++GE ++++ N+ V +
Sbjct: 454 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSV 513
Query: 547 LTEMYLSCGRREDA 560
L +MY G+ + A
Sbjct: 514 LIDMYAKLGKLDTA 527
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 130/322 (40%), Gaps = 64/322 (19%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------------- 50
++ A ++ + +D V+W MI GY + F D A+ F QM +R
Sbjct: 522 GKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAV 581
Query: 51 --------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
D+ N ++ + N++ A F+ E D +
Sbjct: 582 SACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNI 641
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC----QRMDLAESYFKEM 140
WN+++SG+ +G +EALRVF M + + S N G+ V M + +
Sbjct: 642 AWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVI 701
Query: 141 GARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
S T + N ++ + G I +A+K F ++ K+ +WN MI Y +G A
Sbjct: 702 TKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEAL 761
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRR----IDAAISYFKQM---------PETCEKTWNS 243
D F +M ++ + G++++ +D I YF+ M PE +
Sbjct: 762 DSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPE----HYVC 817
Query: 244 IISVLIRNGLVKEAHSYLEKYP 265
++ +L R GL+ A ++ + P
Sbjct: 818 VVDMLTRAGLLSRAKDFILEMP 839
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 24/195 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I +A+ F ++ ++ V+WN MI Y K+GF A+ F+QM ++ + + G++ +
Sbjct: 726 ISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSA 785
Query: 66 DN----VQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLK-D 113
+ V E F+ M + YVC GL+ A MP++ D
Sbjct: 786 CSHIGLVDKGIEYFESMNTEYGLAPKP--EHYVCVVDMLTRAGLLSRAKDFILEMPIEPD 843
Query: 114 VVSWNLVIGALVNCQRMDLAE---SYFKEMGARDVASWTIMVNGLVREGRIVEARKLF-D 169
+ W ++ A V + M++ E + E+ D A++ ++ N L R +AR L
Sbjct: 844 ALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSN-LYAVCRKWDARDLTRQ 902
Query: 170 KMPAKDV-----QAW 179
KM K V Q+W
Sbjct: 903 KMKEKGVKKEPGQSW 917
>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 183/610 (30%), Positives = 315/610 (51%), Gaps = 48/610 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+ +A LFD MP + V++ M+ G + G +D+A+ LF +M D ++V+
Sbjct: 92 VADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGA 151
Query: 62 LMQSD----NVQGAKEVFDGMEV--------RDVVTWNSMISGYVCNGLIDEALRVFHGM 109
Q+ NV A ++ + D NS++ Y +DEA++VF +
Sbjct: 152 CAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESL 211
Query: 110 PLKDVVSWNLVI---GALVNCQRMDLAESYFKEMG-ARDVASWTIMVNGLVREGRIVEAR 165
+VSWN++I G L +R + +E G + +++ M+ ++ + AR
Sbjct: 212 SSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSAR 271
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
+FDK+P V WN +++GY DLF++M +++ + + +++S
Sbjct: 272 AMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSS----- 326
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS-YLEKYPYSNIASWTNVIVGYFEMGE 284
C + N L K+ HS + ++++ + +I Y + G+
Sbjct: 327 -----------CSRLGNF--------ELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQ 367
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
VG A+ +F +MT RDV WN MI GL + L EE F QM+E+G P +++ S++ +
Sbjct: 368 VGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINL 427
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
C+ L ++ GRQ+HAQ +K +Q V ++I MYA+ GN+ A L F+ + + ++++W
Sbjct: 428 CARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAW 487
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
N +I G A +G+ EKA+ELFE M T KPD +TF+ VL+ CS++GLVD+ +F+ M++
Sbjct: 488 NEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMES 547
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
Y + P HYTC++D L R E ++ ++ + P +W LL AC +H+N +
Sbjct: 548 NYGITPLVEHYTCLIDALARAARFAEVEAVIGKMP---YKDDPILWEVLLAACVVHHNAE 604
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIN 584
+GE + + + L+P N Y++L+ +Y + GR DA + A M GV K G SW+
Sbjct: 605 LGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVNHK 664
Query: 585 DGGHVFLSGD 594
DG F+ D
Sbjct: 665 DGSRAFMVAD 674
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 222/480 (46%), Gaps = 64/480 (13%)
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----------PLKDVVSW---------- 117
M R+ V+WN++I+ +G EAL ++ GM L V+S
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60
Query: 118 -------------------NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE 158
N ++G C + A F M + + S+T M+ GL +
Sbjct: 61 RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQG 120
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIA---GYLDNGCVG-----VAEDLFQKMHD----RD 206
G + +A +LF +M ++ + ++ G C G A L Q +H +
Sbjct: 121 GAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKG 180
Query: 207 LTSWKQLINGLVN----SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLE 262
S + + N LV+ ++D AI F+ + +WN +I+ + G + A LE
Sbjct: 181 FGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLE 240
Query: 263 KYPYS----NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
S N +++N++ + +V SA +F+ + VT WN ++ G G+ +L +E
Sbjct: 241 FMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQE 300
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
+ F +M+ PD T +L+ CS L +LG+Q+H+ ++++ + V++ +I
Sbjct: 301 TIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLID 360
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
+Y++CG + AL+ F+ + D++ WNS+I GLA H +E+A + ++MR P + +
Sbjct: 361 IYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESS 420
Query: 439 FVGVLSACSYAGLVDQGR-YYFDCMKNKYFLQPRSAHYTC-VVDLLGRFGLIDEAMNLLN 496
+ +++ C+ + QGR + +K+ Y ++ + C ++D+ + G +D+A N
Sbjct: 421 YASMINLCARLSSIPQGRQMHAQVLKDGY---DQNVYVGCSLIDMYAKSGNMDDARLFFN 477
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 168/367 (45%), Gaps = 43/367 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ ++ EA +F+ + V+WN++I GY + G + AM + M E + TY+
Sbjct: 197 KGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSN 256
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
++A +++ +V A+ +FD + V TWN+++SGY L E + +F M ++V
Sbjct: 257 MLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPD 316
Query: 118 NLVIGA-LVNCQRM-------DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
+ L +C R+ + + + + D+ + +++ + G++ A +F+
Sbjct: 317 RTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFN 376
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
M +DV WN MI+G + A D ++M + NG+ +
Sbjct: 377 MMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRE----------NGMFPT--------- 417
Query: 230 FKQMPETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEV 285
E ++ S+I++ R + ++ H+ + K Y N+ ++I Y + G +
Sbjct: 418 --------ESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNM 469
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A F M +++ WN MI G +N GE+ ++ F M + PD+ TF +VLT C
Sbjct: 470 DDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGC 529
Query: 346 SDLPTLD 352
S +D
Sbjct: 530 SHSGLVD 536
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
++ + +A+ F+ M ++ V WN MI GY +NGF + A+ LF M + D T+
Sbjct: 465 KSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIA 524
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALR---------VFHG 108
V+ G S V A F+ ME +T ++ Y C LID R V
Sbjct: 525 VLTGCSHSGLVDEAVTFFNSMESNYGIT--PLVEHYTC--LIDALARAARFAEVEAVIGK 580
Query: 109 MPLK-DVVSWNLVIGALV---NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEA 164
MP K D + W +++ A V N + + + + + ++ + + ++ N GR +A
Sbjct: 581 MPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDA 640
Query: 165 RKLFDKMPAKDV 176
+ M ++ V
Sbjct: 641 SAVRALMSSRGV 652
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 183/542 (33%), Positives = 289/542 (53%), Gaps = 41/542 (7%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYF 137
+V +N++ISG++ NG +E + M + D ++ I A ++ +
Sbjct: 23 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIKKIHGLL 82
Query: 138 KEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
+ G DV + +VN ++ G + A+ F+++P +DV WN M+ GY G +
Sbjct: 83 FKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVL 142
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
+ F++M+D + + + G+ +S F M + + NG +
Sbjct: 143 ETFRRMNDESVVPSRFTVTGI---------LSVFAVMGD-------------LNNGRI-- 178
Query: 257 AHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
H + K Y S +A ++I Y + + A+++FE+M +D+ WN I + E
Sbjct: 179 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNS-IXSVHEQCG 237
Query: 316 GEEG-LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ------ 368
+G L+ +M +G PD T T+VL CS L L GR+IH I +
Sbjct: 238 DHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID 297
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
+ NA+I MYA+CG+++ A L F + D+ SWN +I G HGY +ALE+F RM
Sbjct: 298 DVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMC 357
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
KPD++TFVGVLSACS+AG V QGR + MK+KY + P HYTCV+D+LGR G +
Sbjct: 358 EVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQL 417
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
DEA L + IE +P VW ALL ACR+H + + E+A +RV ELEP + G Y++++
Sbjct: 418 DEAYELALTMP---IEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMS 474
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
+Y + GR E+ + M++ V+K PGCSWI++ +G HVF+S D +HP+ + + LN
Sbjct: 475 NVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLN 534
Query: 609 LL 610
L
Sbjct: 535 SL 536
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 179/437 (40%), Gaps = 66/437 (15%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGA 71
LF + D + ++ Y K G +++A F ++P RD+ +N ++ G Q +
Sbjct: 82 LFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMV 141
Query: 72 KEVFDGMEVRDVV----TWNSMISGYVCNGLIDEALRVFHGMPLK-----DVVSWNLVIG 122
E F M VV T ++S + G ++ R+ HG +K V N +I
Sbjct: 142 LETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNG-RIIHGFAMKMGYDSGVAVSNSLID 200
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
C+ ++ A F+ M +D+ SW + + + G +L D+M +Q +L+
Sbjct: 201 MYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQP-DLV 259
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL-VNSRRIDAAISYFKQMPETCEKTW 241
+ C +A MH R++ + +++GL + + ID +
Sbjct: 260 TVTTVLPACSHLA----ALMHGREIHGY-MIVSGLGKDGKDIDDVL------------LK 302
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N++I + + G +++AH E+ ++ASW
Sbjct: 303 NAVIDMYAKCGSMRDAHLVFERMXNKDVASW----------------------------- 333
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
N+MI G G + G E L+ F +M E PD TF VL+ CS + GR AQ
Sbjct: 334 --NIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQ- 390
Query: 362 IKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAE 418
+K + T+ + +I M R G + A ++PI + + W +++ H +A
Sbjct: 391 MKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHA- 449
Query: 419 KALELFERMRLTDFKPD 435
L R+ + +P+
Sbjct: 450 -VLAEVAAQRVFELEPE 465
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 7/227 (3%)
Query: 279 YFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + ++ A+ +F T +V +N +I G N EEG +F+ +M+ G PD T
Sbjct: 2 YSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFT 61
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F + C D+ + ++IH K + +A++ Y + G ++ A + F +P
Sbjct: 62 FPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELP 118
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
I D++ WN+++ G A G E LE F RM P T G+LS + G ++ GR
Sbjct: 119 IRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRI 178
Query: 458 YFD-CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
MK Y A ++D+ G+ I++A+ + +R I
Sbjct: 179 IHGFAMKMGY--DSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDI 223
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 138/337 (40%), Gaps = 38/337 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ AQ F+++P RD V WN M+ GY + G + + F +M + + + G++
Sbjct: 107 MEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSV 166
Query: 66 DNVQG---AKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
V G + G ++ V NS+I Y I++AL +F M KD+ SW
Sbjct: 167 FAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSW 226
Query: 118 NLVIGALVNCQRMDLAESYFKEM-GA---RDVASWTIMVNGLVREGRIVEARKLF----- 168
N + C D M GA D+ + T ++ ++ R++
Sbjct: 227 NSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIV 286
Query: 169 -----DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
D DV N +I Y G + A +F++M ++D+ SW +I G
Sbjct: 287 SGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYG 346
Query: 224 DAAISYFKQMPETC----EKTWNSIISVLIRNGLVKEAHSYL----EKYPYS-NIASWTN 274
+ A+ F +M E E T+ ++S G V + ++L KY + I +T
Sbjct: 347 NEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTC 406
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDV----TVWNVMI 307
VI +G G + +EL T + VW ++
Sbjct: 407 VID---MLGRAGQLDEAYELALTMPIEANPVVWRALL 440
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 275/483 (56%), Gaps = 20/483 (4%)
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
L+NC ++ + + +M + T + +++GR + A + D+ N ++
Sbjct: 95 LINCGSLEPERTLYSKM----LNKCTYLRK--LKQGRAIHAH-IQSSTFEDDLVLLNFIL 147
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS 243
Y G + A+DLF KM +D+ SW LI+G S + A++ F +M +
Sbjct: 148 NMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEF 207
Query: 244 IISVLIRNGLV-------KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELM 295
+S L++ ++ H++ KY Y N+ ++++ Y + A +F +
Sbjct: 208 TLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL 267
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
++V WN +I G GE ++ F QM G P + T++SVL C+ +L+ G+
Sbjct: 268 AAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLA-CASSGSLEQGK 326
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+HA IK + N +I MYA+ G+I+ A F + DI+SWNSII G A HG
Sbjct: 327 WVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHG 386
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
+AL+LFE+M +P++ITF+ VL+ACS++GL+D+G+YYF+ MK K+ ++ + AH+
Sbjct: 387 LGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHH 445
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
VVDLLGR G ++EA + E+ I+ + VWGALLGACR+H N+ +G A E++ E
Sbjct: 446 VTVVDLLGRAGRLNEANKFIEEM---PIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFE 502
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
L+P++SG +++L+ +Y S GR DA ++ MKE+GVKKEP CSW++I + HVF++ D
Sbjct: 503 LDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDD 562
Query: 596 SHP 598
SHP
Sbjct: 563 SHP 565
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 176/401 (43%), Gaps = 43/401 (10%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
E D+ N ++ + +++ A+++FD M +D+V+W +ISGY +G EAL +F
Sbjct: 137 EDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPK 196
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA--------RDVASWTIMVNGLVREGR 160
M + +L+ ++ + +++ A +V + +++ R
Sbjct: 197 MLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAH 256
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ EA+ +F+ + AK+V +WN +IAG+ G LF +M
Sbjct: 257 MREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQM------------------ 298
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV--KEAHSYLEKYPYSNIASWTNVIVG 278
+Q E T++S+++ L K H+++ K IA N ++
Sbjct: 299 ---------LRQGFEPTHFTYSSVLACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 349
Query: 279 -YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + G + A KVF + +D+ WN +I G ++ LG E L+ F QM ++ P+ T
Sbjct: 350 MYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 409
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-AMITMYARCGNIQSALLEFSSV 396
F SVLT CS LD G Q + + +K + + + ++ + R G + A +
Sbjct: 410 FLSVLTACSHSGLLDEG-QYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEM 468
Query: 397 PIHDIIS-WNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
PI + W +++ H + L ++ ++ + P D
Sbjct: 469 PIKPTAAVWGALLGACRMHKNMD--LGVYAAEQIFELDPHD 507
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 165/348 (47%), Gaps = 59/348 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVI-- 59
++EAQ+LFDKMP +D V+W V+I GY ++G A+ LF +M + + FT ++++
Sbjct: 156 LEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA 215
Query: 60 AGLMQSD---------------------------------NVQGAKEVFDGMEVRDVVTW 86
+G SD +++ AK +F+ + ++VV+W
Sbjct: 216 SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSW 275
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC------QRMDLAESYFKEM 140
N++I+G+ G + +R+F M + + +++ C ++ ++ +
Sbjct: 276 NALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSLEQGKWVHAHVIKS 335
Query: 141 GARDVAS-WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
G + +A +++ + G I +A+K+F ++ +D+ +WN +I+GY +G A LF
Sbjct: 336 GGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLF 395
Query: 200 QKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIRN 251
++M + ++ ++ +S +D YF+ M E +++ +L R
Sbjct: 396 EQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRA 455
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE-----VGSAIKVFEL 294
G + EA+ ++E+ P A+ ++G M + V +A ++FEL
Sbjct: 456 GRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFEL 503
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 20/192 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
++ I++A+ +F ++ ++D V+WN +I GY ++G A+ LF QM + + T+ +
Sbjct: 353 KSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLS 412
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
V+ S + + F+ M+ + + ++ +V G ++EA + MP
Sbjct: 413 VLTACSHSGLLDEGQYYFELMKKHKI---EAQVAHHVTVVDLLGRAGRLNEANKFIEEMP 469
Query: 111 LKDVVS-WNLVIGALVNCQRMDL----AESYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
+K + W ++GA + MDL AE F E+ D ++ N GR+ +A
Sbjct: 470 IKPTAAVWGALLGACRMHKNMDLGVYAAEQIF-ELDPHDSGPHVLLSNIYASAGRLSDAA 528
Query: 166 KLFDKMPAKDVQ 177
K+ M V+
Sbjct: 529 KVRKMMKESGVK 540
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 173/552 (31%), Positives = 306/552 (55%), Gaps = 21/552 (3%)
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVI 121
D A VF ++ + + WN+M+ GY + AL+++ M L + ++ ++
Sbjct: 14 DGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLL 73
Query: 122 GALVNCQRMDLAES---YFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
+ + + + + ++G D+ T +++ + GR+ +A K+FD+ +DV
Sbjct: 74 KSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVV 133
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
++ +I GY +G + A+++F ++ +D+ SW +I+G + A+ FK+M +T
Sbjct: 134 SYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTN 193
Query: 238 ----EKTWNSIISVLIRNGLV---KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAI 289
E T +++S ++ V ++ HS+++ + + SN+ +I Y + G+V +A
Sbjct: 194 VRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETAC 253
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
+FE ++ +DV WN +I G +L +E L F +M SG SP++ T S+L C+ L
Sbjct: 254 GLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLG 313
Query: 350 TLDLGRQIHAQAIKIARN--QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
+D+GR IH K ++ ++ ++I MYA+CG+I++A F+S+ + SWN++
Sbjct: 314 AIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAM 373
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
I G A HG A +LF RMR +PDDITFVG+LSACS++G +D GR+ F M Y
Sbjct: 374 IFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYD 433
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
+ P+ HY C++DLLG GL EA + I+ +E +W +LL ACR H N+++ E
Sbjct: 434 ITPKLEHYGCMIDLLGHSGLFKEAKEM---IKTMPMEPDGVIWCSLLKACRRHGNLELAE 490
Query: 528 IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGG 587
+M++EP N G Y++L+ +Y + G ++ ++ A + G+KK PGCS I+I+
Sbjct: 491 SFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEV 550
Query: 588 HVFLSGDSSHPK 599
H F+ GD HP+
Sbjct: 551 HEFIVGDKLHPR 562
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 139/549 (25%), Positives = 235/549 (42%), Gaps = 101/549 (18%)
Query: 18 QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
+ D +I Y +NG L++A +F++ RD+ +Y +I G S N++ A+E+FD
Sbjct: 98 EPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDE 157
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMDLAESY 136
+ V+DVV+WN+MISGY G EAL +F M +V ++ L C A+S
Sbjct: 158 IPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSAC-----AQSR 212
Query: 137 FKEMGARDVASWT---------IMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMI 183
E+G R V SW +VN L+ + G++ A LF+ + KDV +WN +I
Sbjct: 213 SVELG-RQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLI 271
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS 243
GY A LFQ+M + + T S
Sbjct: 272 GGYTHMNLYKEALLLFQEM---------------------------LRSGESPNDVTIVS 304
Query: 244 IISVLIRNGLV---KEAHSYLEK--YPYSNIASW-TNVIVGYFEMGEVGSAIKVFELMTT 297
I+ G + + H Y++K +N S T++I Y + G++ +A +VF M
Sbjct: 305 ILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLH 364
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
+ ++ WN MIFG + G F +M+++G PD+ TF +L+ CS LDLGR I
Sbjct: 365 KSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHI 424
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
+S ++ P + + +I L + G
Sbjct: 425 ----------------------------FKSMTQDYDITP--KLEHYGCMIDLLGHSGLF 454
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS-AHYT 476
++A E+ + M + +PD + + +L AC G ++ + +N ++P + Y
Sbjct: 455 KEAKEMIKTMPM---EPDGVIWCSLLKACRRHGNLELAESF---ARNLMKVEPENPGSYV 508
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE-IAGERVME 535
+ ++ G DE + + G++ P G I + +V E I G++
Sbjct: 509 LLSNIYATAGEWDEVAKVRALLNGKGMKKVP-------GCSSIEIDSEVHEFIVGDK--- 558
Query: 536 LEPNNSGVY 544
L P N +Y
Sbjct: 559 LHPRNREIY 567
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 149/353 (42%), Gaps = 89/353 (25%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N R+++A +FD+ RD V++ +I GY +G + +A +F+++P +D+ ++N +I+G
Sbjct: 113 QNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISG 172
Query: 62 LMQSDNVQGAKEVFDGMEV--------------------------RDVVTW--------- 86
++ + + A E+F M R V +W
Sbjct: 173 YAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSN 232
Query: 87 ----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM-- 140
N++I Y G ++ A +F G+ KDVVSWN +IG + A F+EM
Sbjct: 233 LKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLR 292
Query: 141 --------------------GARDVASW-------------------TIMVNGLVREGRI 161
GA D+ W T +++ + G I
Sbjct: 293 SGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDI 352
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGL 217
A ++F+ M K + +WN MI G+ +G DLF +M + D ++ L++
Sbjct: 353 EAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSAC 412
Query: 218 VNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVKEAHSYLEKYP 265
+S ++D FK M + + T + +I +L +GL KEA ++ P
Sbjct: 413 SHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMP 465
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 197/645 (30%), Positives = 314/645 (48%), Gaps = 75/645 (11%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTY--- 55
N I++A+ FDKM +D V WNVMI GY + G D+A+ LF M + D T+
Sbjct: 58 NGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACV 117
Query: 56 --------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDV 83
NT++ + + A+++FD M D+
Sbjct: 118 LSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDL 177
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALV---NCQRMDLAESY 136
V WN MI GYV NG +D+A +F+ M D +++ + +L + +++ Y
Sbjct: 178 VVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGY 237
Query: 137 FKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
G DV + +++ + V A K+F+ D+ + MI+GY+ NG A
Sbjct: 238 IVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDA 297
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
++F+ W L+ + I A+++ +P + L L +
Sbjct: 298 LEIFR---------W------LLQKKMIPNALTFSSILPAC---------AGLAAIKLGR 333
Query: 256 EAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
E H Y+ K + I+ Y + G + A +F ++ +D WN +I ++
Sbjct: 334 ELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDG 393
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
EE + F QM G D T ++ L+ C+++P L G++IH IK A +
Sbjct: 394 KPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMS 453
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
A+I MYA+CG + A L F+ + + ++WNSII YHGY +L LF M +P
Sbjct: 454 ALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQP 513
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
D ITF+ +LS+C +AG V+ G YF CM +Y + + HY C+ DL GR G +DEA +
Sbjct: 514 DHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEV 573
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
+ + + +VWG LLGACR+H N+++ E+A +++LEP NSG YL+LT +
Sbjct: 574 ITSMP---FPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADA 630
Query: 555 GRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
G+ +I MKE GV+K PGCSWI++N+ VF + D SHP+
Sbjct: 631 GKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSHPE 675
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 216/492 (43%), Gaps = 55/492 (11%)
Query: 156 VREGRIVEARKL---FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
VR G++++ L FD D+ + +I Y DNGC+ A F KM D+D W
Sbjct: 26 VRLGKVIQDMILEMGFDL----DMFVASSLIKLYADNGCIEDARRFFDKMIDKDCVLWNV 81
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEKYP 265
+ING V D+AI FK M + K T+ ++S+ +V ++ H + +
Sbjct: 82 MINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSG 141
Query: 266 YSNIASWTNVIVGYFEMG-EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
+ N +V + G ++G A K+F++M D+ VWN MI G +N ++ F
Sbjct: 142 LDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFN 201
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
+M +G PD+ TFTS L ++ +L ++IH ++ +++A+I +Y +C
Sbjct: 202 EMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCR 261
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+ A F+ DI+ + ++I G +G + ALE+F + P+ +TF +L
Sbjct: 262 DAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILP 321
Query: 445 ACSYAGLVDQGR-YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID-------------- 489
AC+ + GR + +KN+ L+ + + ++++ + G +D
Sbjct: 322 ACAGLAAIKLGRELHGYIIKNE--LEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDA 379
Query: 490 -----------------EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGE 531
EA+ L ++ +G++ A L AC + G EI G
Sbjct: 380 ICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGF 439
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
+ ++ L MY CG+ A+ +F M+E K E + I G H +L
Sbjct: 440 MIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQE---KNEVAWNSIIAAYGYHGYL 496
Query: 592 SGDSSHPKFHRL 603
+ S FH +
Sbjct: 497 A--DSLALFHNM 506
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 160/387 (41%), Gaps = 94/387 (24%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
+ ++ +A+ LFD MPQ D V WN MI GY +NGF+D+A LFN+M + D T+ +
Sbjct: 158 KGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTS 217
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVR------------------------------------ 81
+ L +S +++ KE+ G VR
Sbjct: 218 FLPSLAESSSLKQIKEI-HGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKF 276
Query: 82 DVVTWNSMISGYVCNGLIDEALRVF----------------------------------H 107
D+V + +MISGYV NG+ +AL +F H
Sbjct: 277 DIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELH 336
Query: 108 GMPLKDVVSWNLVIGALV-----NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIV 162
G +K+ + +G+ + C R+DLA F + +D W ++ ++G+
Sbjct: 337 GYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPE 396
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK-MH--------DRDLTSWKQL 213
EA LF +M + V+ + ++ L + C + + K +H + DL L
Sbjct: 397 EAIYLFRQMGMEGVKYDCVTVSAAL-SACANIPALHYGKEIHGFMIKGAFESDLFDMSAL 455
Query: 214 INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA----HSYLEKYPYSNI 269
IN +++ A F M E E WNSII+ +G + ++ H+ LE+ +
Sbjct: 456 INMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDH 515
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMT 296
++ ++ G+V ++ F MT
Sbjct: 516 ITFLTILSSCGHAGQVEDGVRYFRCMT 542
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M G PD TF V+ C+ L + LG+ I +++ + V++++I +YA G
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
I+ A F + D + WN +I G G ++ A++LF+ M ++ KPD +TF VLS
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120
Query: 446 CSYAGLVDQGR 456
+V+ GR
Sbjct: 121 SCSEAMVEYGR 131
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 200/630 (31%), Positives = 318/630 (50%), Gaps = 81/630 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER----- 50
+ RI A ++FD +P R+ VTW +I GY + G A+ LF +M P+R
Sbjct: 184 KAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLAS 243
Query: 51 ----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
D N +I + + A+ +FD ME R+
Sbjct: 244 AASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRN 303
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESYFK 138
+V+W +MI+GY+ N L EA+ +F + DV + ++ + + +
Sbjct: 304 LVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHA 363
Query: 139 EMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ D+ S + N L+ + + EAR +F+ + D ++N MI GY G +
Sbjct: 364 HVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTG 423
Query: 195 AEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
A ++F KM L ++ L+ V+S R D +S KQ+
Sbjct: 424 AVEIFGKMRYCSLKPSLLTFVSLLG--VSSSRSDLELS--KQI----------------- 462
Query: 251 NGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
+GL+ ++ + L+ Y S + I Y + V A VF LM RD+ +WN MIFGL
Sbjct: 463 HGLIVKSGTSLDLYAGSAL------IDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGL 516
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+N+ GEE +K F +++ SG +P+ TF +++T+ S L ++ G+Q HAQ IK +
Sbjct: 517 AQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDP 576
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
+SNA+I MYA+CG I+ L F S D+I WNS+I A HG+AE+AL +F M
Sbjct: 577 HISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGA 636
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
+P+ +TFV VLSAC++AGLVD+G ++F+ MK KY ++P + HY VV+L GR G +
Sbjct: 637 GVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHA 696
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
A + + IE T+W +LL AC + N+++G A E + +P +SG ++++ +
Sbjct: 697 AKEFIERMP---IEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNI 753
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
Y S G DA+++ M GV KEPG SW
Sbjct: 754 YASKGLWADAQKLRQGMDCAGVVKEPGYSW 783
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 148/568 (26%), Positives = 244/568 (42%), Gaps = 86/568 (15%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D+F N ++ G + + A+ +FD M R++V+W S IS Y +G D+AL +F P
Sbjct: 64 DLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFP 123
Query: 111 LKDVVSWN-------LVIGALVNCQRMDLAESYFKEMGAR-------DVASWTIMVNGLV 156
S + L+ AL C + A + G +V T +VN
Sbjct: 124 SAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYA 183
Query: 157 REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
+ GRI A +FD +PA++ W +I GY G GVA +LF +M ++G
Sbjct: 184 KAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMG----------LDG 233
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVI 276
+ R + A+ + C + G ++ H Y + + AS N +
Sbjct: 234 VRPDRFVLASAA------SACSGLG------FVEGG--RQIHGYAYRTAAESDASVVNAL 279
Query: 277 VG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ Y + + A ++F+ M R++ W MI G +N L E + F Q+ ++G PD
Sbjct: 280 IDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDV 339
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
TS+L C L + GRQ+HA IK V NA+I MYA+C ++ A F +
Sbjct: 340 FACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEA 399
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS-------- 447
+ D IS+N++I G A G A+E+F +MR KP +TFV +L S
Sbjct: 400 LAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELS 459
Query: 448 ----------------YAG-----------LVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
YAG LVD + F M+N+ + + ++
Sbjct: 460 KQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVI-----WNAMIF 514
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL---- 536
L + +EA+ L +R G+ + + AL+ +I G+ ++++
Sbjct: 515 GLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADS 574
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIF 564
+P+ S L +MY CG E+ + +F
Sbjct: 575 DPHISNA---LIDMYAKCGFIEEGRLLF 599
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 233/521 (44%), Gaps = 41/521 (7%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----------DMFT 54
R+ +A+ LFD MP R+ V+W I Y ++G D+A+ LF P + F
Sbjct: 80 RLGDARRLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFL 139
Query: 55 YNTVIAGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGM 109
+ + QS + ++V G+ + +V ++++ Y G ID A+ VF +
Sbjct: 140 LASALRACAQSRAARFGEQV-HGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDAL 198
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV-------ASWTIMVNGL--VREGR 160
P ++ V+W VI + +A F MG V AS +GL V GR
Sbjct: 199 PARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGR 258
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ + D N +I Y + +A LF M +R+L SW +I G + +
Sbjct: 259 QIHGYA-YRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQN 317
Query: 221 RRIDAAISYFKQMPE--------TCEKTWNSIISV-LIRNGLVKEAHSYLEKYPYSNIAS 271
A+S F Q+ + C NS S+ I G ++ H+++ K +
Sbjct: 318 SLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQG--RQVHAHVIKADLESDEY 375
Query: 272 WTNVIVGYFEMGE-VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
N ++ + E + A VFE + D +N MI G ++ F +M+
Sbjct: 376 VKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCS 435
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
P TF S+L + S L+L +QIH +K + +A+I +Y++ + A
Sbjct: 436 LKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAK 495
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS-ACSYA 449
L FS + D++ WN++I GLA + E+A++LF R+R++ P++ TFV +++ A + A
Sbjct: 496 LVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLA 555
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
+ +++ +K P ++ ++D+ + G I+E
Sbjct: 556 SIFHGQQFHAQIIKAGADSDPHISN--ALIDMYAKCGFIEE 594
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 202/662 (30%), Positives = 320/662 (48%), Gaps = 76/662 (11%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYN------ 56
A L D+MP+R+ V++N++I Y + G A+ F + D FTY
Sbjct: 54 HAARLIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAAC 113
Query: 57 ---------------TVIAGL--------------MQSDNVQGAKEVFDGMEVRDVVTWN 87
TV+ GL + A+ VFD E D V+WN
Sbjct: 114 SRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWN 173
Query: 88 SMISGYVCNGLIDEALRVFHGMPLKDVVSWN-LVIGALVNCQR------MDLAESYF--- 137
S++SGYV G +E L+VF M + WN +G+++ C +AE+
Sbjct: 174 SLLSGYVRAGAREETLKVFSLM-CHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCV 232
Query: 138 -KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL-DNGCVGVA 195
K D+ + M++ + G + A LF +P +V +N MIAG+ D VG
Sbjct: 233 VKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVG-- 290
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
+++ L+ + ++ SR + + F + C ++ G K
Sbjct: 291 ----KEVSREALSLYSEM-----QSRGMQPSEFTFSSILRAC--------NLAGEFGFGK 333
Query: 256 EAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+ H + K+ + + + ++ Y + G + + F + +D+ W MI G +N+
Sbjct: 334 QIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNE 393
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
L E+ L+ F + G PD T +SV+ C+ L G QI AIK N+FT + N
Sbjct: 394 LFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGN 453
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
+ I M AR G++ + F + D++SW+++I A HG A AL +F M P
Sbjct: 454 SFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAP 513
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
+++TF+ VL+ACS+ GLVD G Y++ MKN+Y L P H TCVVDLLGR G + +A
Sbjct: 514 NEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAF 573
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
IR VW +LL +CRIH +++ G++ +++M+LEP +S Y+IL MYL
Sbjct: 574 ---IRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDA 630
Query: 555 GRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
G A + MKE GVKKEPG SWI++ G H F++GD SHP+ + + L + ++I
Sbjct: 631 GELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKI 690
Query: 615 ER 616
E+
Sbjct: 691 EK 692
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 148/365 (40%), Gaps = 49/365 (13%)
Query: 254 VKEAHSYLEK-YPYSNIASWTNVIVGYFEMGEVGS---AIKVFELMTTRDVTVWNVMIFG 309
V H+++ + +P +++ +++ Y +G VG+ A ++ + M R+ +N++I
Sbjct: 18 VAAVHAHIARAHPTASLFLRNSLLAAYCRLG-VGAPLHAARLIDEMPRRNAVSYNLLISS 76
Query: 310 LGENDLGEEGLK-FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
L L+ F +G D T+ + L CS L G+ +HA +
Sbjct: 77 YSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGN 136
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
+SN++ +MYA CG + A F + HD +SWNS++ G G E+ L++F M
Sbjct: 137 GVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMC 196
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN---KYFLQPRSAHYTCVVDLLGRF 485
+ ++ C+ D GR+ + + K L + ++D+ +
Sbjct: 197 HHGLGWNSFALGSIIKCCASGS--DVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKR 254
Query: 486 GLID-------------------------------------EAMNLLNEIRADGIEVSPT 508
G + EA++L +E+++ G++ S
Sbjct: 255 GALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEF 314
Query: 509 VWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ ++L AC + G +I G+ + ++ + L ++Y G ED R F +
Sbjct: 315 TFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSL 374
Query: 568 KENGV 572
+ +
Sbjct: 375 PKQDI 379
>gi|302773832|ref|XP_002970333.1| hypothetical protein SELMODRAFT_93575 [Selaginella moellendorffii]
gi|300161849|gb|EFJ28463.1| hypothetical protein SELMODRAFT_93575 [Selaginella moellendorffii]
Length = 612
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/541 (31%), Positives = 277/541 (51%), Gaps = 20/541 (3%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++A+ LFD++ DTV WN+M+ Y +NG NA +F+ P+RDM ++NT+ S
Sbjct: 58 VEDARKLFDQIDNPDTVQWNIMVTAYAQNGHFQNAKSMFDSSPQRDMVSWNTMCQSFSWS 117
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
V + M +VV+WNS++ + NG +A +F MP KDV+SWN+VI
Sbjct: 118 HKVDEVSQCLLKMPQHNVVSWNSLLCTFAQNGHYLKAQALFVAMPEKDVISWNIVISQYA 177
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
+D A+ F V +W +++ E++++FD MP +D+ +WN+ IAG
Sbjct: 178 EID-LDRAKLLFDRAPQHSVVTWNVLI-----AHHCEESKRVFDTMPCRDIVSWNI-IAG 230
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
G + A DLF + R L W +++G +S ++ A S MP T +WNS++
Sbjct: 231 NAREGHLDCAMDLFDRSPSRSLALWNVILSGFASSGDVNRARSILSSMPRTDVISWNSLL 290
Query: 246 SVLIRNGLVKEAHSYLEKYPYSNIAS--WTNVIVGYFEMGEVGSAIKVFELMTTRD---- 299
+ L+ +++A P+ N++S T ++ Y G V A +VF+ M RD
Sbjct: 291 AGLLEFSSLRDAGELFTAMPHRNLSSVVATALLDMYSRCGRVDQAKRVFDSMRARDERVD 350
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMK--ESGPSPDNATFTSVLTICSDL--PTLDLGR 355
+ WN MI G + E L+ + +++ + PD +TF +V+ C+ P + GR
Sbjct: 351 LVTWNAMIAGFARSGHSIEALELYRELEKLDRELQPDASTFAAVIDACASAVPPAVSEGR 410
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
IH QAI + V ++++ MY R G + +A F + + ++WNS++ G A HG
Sbjct: 411 AIHRQAIARRMDHDPVVGSSLVAMYTRIGGLDAAQRCFDRITARNTVAWNSMLVGFANHG 470
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
++ F M+L D +TFV VLS+CS+AG + + F M +F+ HY
Sbjct: 471 SGTGVIQSFHAMQLDGAIADAVTFVAVLSSCSHAGWIVEAGQCFQSMAADFFIAATPEHY 530
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
+ + DL R G I EA +L IRA E S W +LL ACRIH +++ G A + E
Sbjct: 531 SAIGDLFARLGQIGEARSL---IRAKPYESSAADWMSLLSACRIHCDVEHGASAAAQAFE 587
Query: 536 L 536
Sbjct: 588 F 588
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 148/335 (44%), Gaps = 41/335 (12%)
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
T N ++ + + G V++A ++ + W ++ Y + G +A +F+ RD
Sbjct: 44 TTNQLMRMFGKCGSVEDARKLFDQIDNPDTVQWNIMVTAYAQNGHFQNAKSMFDSSPQRD 103
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
+ WN M + +E + ++M P + ++ S+L + G + A
Sbjct: 104 MVSWNTMCQSFSWSHKVDEVSQCLLKM----PQHNVVSWNSLLCTFAQN-----GHYLKA 154
Query: 360 QAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
QA+ +A + +S N +I+ YA ++ A L F P H +++WN +I A+H E
Sbjct: 155 QALFVAMPEKDVISWNIVISQYAEI-DLDRAKLLFDRAPQHSVVTWNVLI---AHH--CE 208
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP-RS-AHYT 476
++ +F+ M D +I AG +G + DC + + P RS A +
Sbjct: 209 ESKRVFDTMPCRDIVSWNII----------AGNAREG--HLDCAMDLFDRSPSRSLALWN 256
Query: 477 CVVDLLGRFGLIDEAMNLLNEI-RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
++ G ++ A ++L+ + R D I W +LL ++++ AGE
Sbjct: 257 VILSGFASSGDVNRARSILSSMPRTDVIS-----WNSLLAGLLEFSSLR---DAGELFTA 308
Query: 536 LEPNN--SGVYLILTEMYLSCGRREDAKRIFAQMK 568
+ N S V L +MY CGR + AKR+F M+
Sbjct: 309 MPHRNLSSVVATALLDMYSRCGRVDQAKRVFDSMR 343
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 189/631 (29%), Positives = 305/631 (48%), Gaps = 78/631 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF----NQMPERDMFTYNTVIAG 61
+++A+ +FDKM +R+ +W ++ Y G + + LF N+ D F + V
Sbjct: 61 VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKA 120
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ N + K+V+D M + G+ N + + ++
Sbjct: 121 CSELKNYRVGKDVYDYM----------LSIGFEGNSCVKGS-----------------IL 153
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
+ C RMD+A +F+E+ +DV W IMV+G +G +A +F KM + V+ ++
Sbjct: 154 DMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSI 213
Query: 182 MIA---------GYLDNG------CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
IA L +G C+ V E D DL L++ R ++ A
Sbjct: 214 TIASAVSACTNLSLLRHGREIHGYCIKVEE------LDSDLLVGNSLVDYYAKCRSVEVA 267
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVK--EAHSYLEKYPYSNIASWTNVIVGYFEMGE 284
F + +T +WN++++V G + + + LE + +IA
Sbjct: 268 RRKFGMIKQTDLVSWNAMLAV---TGFTQYGDGKAALEFFQRMHIAC------------- 311
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
VF ++TRDV VWN +I ++ L +M S + T S L
Sbjct: 312 -----SVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPA 366
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
CS L L G++IH I+ + + N++I MY RCG+IQ + F +P D++SW
Sbjct: 367 CSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSW 426
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
N +I HG+ A+ LF++ R KP+ ITF +LSACS++GL+++G YF MK
Sbjct: 427 NVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKT 486
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
+Y + P Y C+VDLL R G +E + + ++ E + VWG+LLGACRIH N
Sbjct: 487 EYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKM---PFEPNAAVWGSLLGACRIHCNPD 543
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIN 584
+ E A + ELEP +SG Y+++ +Y + GR EDA +I MKE GV K PGCSWI++
Sbjct: 544 LAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVK 603
Query: 585 DGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
H F+ GD+SHP ++ + L+ +I+
Sbjct: 604 RKLHSFVVGDTSHPLMEQISAKMESLYFDIK 634
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 208/482 (43%), Gaps = 80/482 (16%)
Query: 100 DEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREG 159
DE + ++ + K +NL +G V+ Q + + +G+R ++ + G
Sbjct: 7 DECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSR-------LLEVYCQTG 59
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
+ +AR++FDKM ++V +W ++ Y G D +L +VN
Sbjct: 60 CVEDARRMFDKMSERNVFSWTAIMEMYCGLG---------------DYEETIKLFYLMVN 104
Query: 220 SR-RIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
R D + F ++ + C + N + K+ + Y+ + + I+
Sbjct: 105 EGVRPDHFV--FPKVFKACSELKNYRVG--------KDVYDYMLSIGFEGNSCVKGSILD 154
Query: 279 YF-EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
F + G + A + FE + +DV +WN+M+ G ++ L F +M G P++ T
Sbjct: 155 MFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSIT 214
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIAR-NQFTTVSNAMITMYARCGNIQSALLEFSSV 396
S ++ C++L L GR+IH IK+ + V N+++ YA+C +++ A +F +
Sbjct: 215 IASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMI 274
Query: 397 PIHDIISWNSI--ICGLAYHGYAEKALELFERMRL-----TDFKPDD-ITFVGVLSACSY 448
D++SWN++ + G +G + ALE F+RM + ++ D + + ++SAC+
Sbjct: 275 KQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQ 334
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
+G RS + A++LL E+ +EV+
Sbjct: 335 SG--------------------RSVN----------------ALDLLREMNLSNVEVNTV 358
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL-ILTEMYLSCGRREDAKRIFAQM 567
+ L AC ++ G+ + ++ + L L +MY CG + ++RIF M
Sbjct: 359 TMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLM 418
Query: 568 KE 569
+
Sbjct: 419 PQ 420
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 105/525 (20%), Positives = 201/525 (38%), Gaps = 82/525 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYN 56
++ R+ A+ F+++ +D WN+M+ GY G A+ +F +M + + T
Sbjct: 157 IKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIA 216
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVR------DVVTWNSMISGYVCNGLIDEALRVFHGMP 110
+ ++ ++ +E+ G ++ D++ NS++ Y ++ A R F +
Sbjct: 217 SAVSACTNLSLLRHGREI-HGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIK 275
Query: 111 LKDVVSWNLVI------------GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE 158
D+VSWN ++ AL QRM +A S F E+ RDV W +++ +
Sbjct: 276 QTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQS 335
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
GR V A L +M +V+ + + L C +A L
Sbjct: 336 GRSVNALDLLREMNLSNVEVNTVTMVSALP-ACSKLA--------------------ALR 374
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+ I I + +TC NS+I + R G ++++ + P ++ SW NV++
Sbjct: 375 QGKEIHQFI--IRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSW-NVMIS 431
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ G + G + + F Q + G P++ TF
Sbjct: 432 VY------------------------------GMHGFGMDAVNLFQQFRTMGLKPNHITF 461
Query: 339 TSVLTICSDLPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
T++L+ CS ++ G + + A + M+ + +R G L +P
Sbjct: 462 TNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMP 521
Query: 398 IH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI-TFVGVLSACSYAGLVDQG 455
+ W S++ H L + L + +P +V + + S AG +
Sbjct: 522 FEPNAAVWGSLLGACRIH--CNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDA 579
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
MK + +P + V L F + D + L+ +I A
Sbjct: 580 AKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISA 624
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/496 (32%), Positives = 274/496 (55%), Gaps = 17/496 (3%)
Query: 128 QRMDLA--ESYFKEMGARDVASWTIMVNGLVREG---RIVEARKLFDKMPAKDVQAWNLM 182
+R DLA E F + ++ ++ G + R+ +AR+LFD +P D ++N +
Sbjct: 24 RRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFDSIPHPDTVSYNTL 83
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN 242
++ + G + A +F M +D+TSW +++GL + + A + F+ MP +WN
Sbjct: 84 LSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWN 143
Query: 243 SIISVLIRNGLVKEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
++++ L +G + A P A WT ++ GY + G V A++ F M R++
Sbjct: 144 AMVAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLV 203
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKE-SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
WN ++ G +N ++ L+ F M E S P+ +T +SVL CS+L L GRQ+H
Sbjct: 204 SWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQW 263
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
+K+ ++ TV ++++MY +CG++ A F + DI++WN++I G A HG +A
Sbjct: 264 CMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQA 323
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
++LFE+M+ PD IT + VL+AC + GL D G F+ M+ Y ++P+ HY+C+VD
Sbjct: 324 IKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVD 383
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LL R GL++ A+N+++ + E P+ +G LL ACR++ N++ E A +++E +P N
Sbjct: 384 LLCRAGLLERAVNMIHSM---PFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQN 440
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
+G Y+ L +Y + D R+ MK+N V K PG SW++I H F S D HP+
Sbjct: 441 AGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQ- 499
Query: 601 HRLRYLLNLLHTEIER 616
L L+H +++R
Sbjct: 500 ------LGLIHDKLDR 509
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 201/413 (48%), Gaps = 49/413 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFK-NGF--LDNAMCLFNQMPERDMFTYNT 57
+R + A+ F + T T+N ++ GY K +G L +A LF+ +P D +YNT
Sbjct: 23 VRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFDSIPHPDTVSYNT 82
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+++ ++ GA+ VF M V+DV +WN+M+SG NG +EA +F MP+++ VSW
Sbjct: 83 LLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSW 142
Query: 118 NLVIGALVNCQRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
N ++ AL M AE F+ + D WT MV+G + G + +A + F MP +++
Sbjct: 143 NAMVAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNL 202
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE- 235
+WN ++AGY+ N R D A+ FK M E
Sbjct: 203 VSWNAVVAGYVKNS-------------------------------RADDALRVFKTMVED 231
Query: 236 -TCEKTWNSIISVLIRN------GLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGS 287
+ +++ SVL+ G ++ H + K P S N+ T+++ Y + G++
Sbjct: 232 SIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLND 291
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A KVF+ M+T+D+ WN MI G ++ G + +K F +MK+ G PD T +VLT C
Sbjct: 292 ACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIH 351
Query: 348 LPTLDLGRQIH---AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
D G Q +A KI Q S M+ + R G ++ A+ S+P
Sbjct: 352 TGLCDFGIQCFETMQEAYKI-EPQIDHYS-CMVDLLCRAGLLERAVNMIHSMP 402
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+ +A +FD+M +D V WN MI GY ++G A+ LF +M + D T V+
Sbjct: 289 LNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTA 348
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLK 112
+ + + F+ M+ + I Y C GL++ A+ + H MP +
Sbjct: 349 CIHTGLCDFGIQCFETMQ--EAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPFE 404
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 188/640 (29%), Positives = 337/640 (52%), Gaps = 41/640 (6%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAGLM 63
+A+ +FD + Q++ + WN M+ Y +NGFL N M LF M D FTY ++++
Sbjct: 270 DARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCA 329
Query: 64 QSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+ ++ +++ + + ++ N++I Y G + EA + F M +D +SWN
Sbjct: 330 CFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNA 389
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREG---RIVEARKLFDKMPAK-- 174
+I V + A S F+ M + + + ++ +++EA + F + K
Sbjct: 390 IIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLG 449
Query: 175 ---DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING--LVNSRR------- 222
++ A + +I Y G + A + M +R + S LI G L N++
Sbjct: 450 LETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTKESINLLHE 509
Query: 223 -----IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
+ + F + + C+ + I+ + I +VK ++ T+++
Sbjct: 510 MQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFL------GTSLLG 563
Query: 278 GYFEMGEVGSAIKVF-ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + + A +F E + + + +W +I G +N+ + L + +M+++ SPD A
Sbjct: 564 MYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQA 623
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
TF +VL C+ L +L GR+IH+ + S+A++ MYA+CG+++S++ F +
Sbjct: 624 TFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEEL 683
Query: 397 PI-HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
D+ISWNS+I G A +GYA+ AL++F+ M + PDD+TF+GVL+ACS+AG V +G
Sbjct: 684 ATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEG 743
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
R FD M N Y ++PR HY C+VDLLGR+G + EA ++++ +E + +W LLG
Sbjct: 744 RQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLE---VEPNAMIWANLLG 800
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
ACRIH + K G+ A ++++ELEP +S Y++L+ MY + G ++A+ + M + ++K
Sbjct: 801 ACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKI 860
Query: 576 PGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
PGCSWI + ++F++GD SH + + L L I+
Sbjct: 861 PGCSWIVVGQETNLFVAGDISHSSYDEISKALKHLTALIK 900
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 231/500 (46%), Gaps = 75/500 (15%)
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM---PAKDVQAWNL 181
+ C R A + F + SWT +++G V+ G EA +FDKM D A
Sbjct: 98 LTCARTIFASAPFPHL---HTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPDQVALVT 154
Query: 182 MIAGYLDNGCVGVAEDLFQKMHD--RDLTSWKQLINGLVNSRRIDAAISYFKQMPE---- 235
++ Y+ G + A LFQ+M R++ +W +I+G + + A+++F QM +
Sbjct: 155 VLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVK 214
Query: 236 TCEKTWNSIISVL-----IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+ T S++S + + +GL+ AH+ + + S+I +++I Y + A +
Sbjct: 215 SSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFE-SSIYVASSLINMYGKCQMPDDARQ 273
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
VF+ ++ +++ VWN M+ +N ++ F+ M G PD T+TS+L+ C+
Sbjct: 274 VFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEY 333
Query: 351 LDLGRQIHAQAIKIARNQFTT---VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
L++GRQ+H+ IK +FT+ V+NA+I MYA+ G ++ A F + D ISWN+I
Sbjct: 334 LEVGRQLHSAIIK---KRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAI 390
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
I G A LF RM L PD+++ +LSAC +++ G+ F C+ K
Sbjct: 391 IVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQ-QFHCLSVKLG 449
Query: 468 LQPRSAHYTCVVDLLGRFGLI------------------------------DEAMNLLNE 497
L+ + ++D+ + G I E++NLL+E
Sbjct: 450 LETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTKESINLLHE 509
Query: 498 IRADGIEVSPTVWGALLGACR----------IHNNI-KVGEIAGERVMELEPNNSGVYLI 546
++ G++ S + +L+ C+ IH I K G + G +
Sbjct: 510 MQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTS--------- 560
Query: 547 LTEMYLSCGRREDAKRIFAQ 566
L MY+ R DA +F++
Sbjct: 561 LLGMYMDSQRLADANILFSE 580
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 148/606 (24%), Positives = 258/606 (42%), Gaps = 88/606 (14%)
Query: 17 PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER---DMFTYNTVIAGLMQSDNVQGAKE 73
P TV+W +I GY + G A+ +F++M D TV+ + + A +
Sbjct: 111 PHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQ 170
Query: 74 VFDGMEV--RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS----WNLVIGALVNC 127
+F M + R+VV WN MISG+ +EAL FH M V S V+ A+ +
Sbjct: 171 LFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASL 230
Query: 128 QRMD---LAESYFKEMGARD---VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
++ L ++ + G VAS I + G + +AR++FD + K++ WN
Sbjct: 231 AALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPD--DARQVFDAISQKNMIVWNA 288
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
M+ Y NG + +LF M I I P+ E T+
Sbjct: 289 MLGVYSQNGFLSNVMELFLDM--------------------ISCGIH-----PD--EFTY 321
Query: 242 NSIISVLIRNGLV---KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
SI+S + ++ HS + K + SN+ +I Y + G + A K FE MT
Sbjct: 322 TSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTY 381
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
RD WN +I G + ++ F +M G PD + S+L+ C ++ L+ G+Q
Sbjct: 382 RDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQF 441
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H ++K+ +++I MY++CG+I+ A +SS+P ++S N++I G A
Sbjct: 442 HCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTK 501
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYA----------------GLVDQGRYYFDC 461
E ++ L M++ KP +ITF ++ C + GL+ +
Sbjct: 502 E-SINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTS 560
Query: 462 MKNKYFLQPRSA-------HYTCVVDLLGRFGLI---------DEAMNLLNEIRADGIEV 505
+ Y R A ++ + ++ LI D A+NL E+R + I
Sbjct: 561 LLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISP 620
Query: 506 SPTVWGALLGAC----RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
+ +L AC +H+ ++ + +L+ S L +MY CG + +
Sbjct: 621 DQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSA---LVDMYAKCGDVKSSV 677
Query: 562 RIFAQM 567
++F ++
Sbjct: 678 QVFEEL 683
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/557 (21%), Positives = 236/557 (42%), Gaps = 100/557 (17%)
Query: 5 RIQEAQNLFDKMPQ--RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
++ +A LF +MP R+ V WNVMI G+ K + A+ F+QM + + + + +A +
Sbjct: 164 KLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASV 223
Query: 63 MQS--------------------------------DNVQG-------AKEVFDGMEVRDV 83
+ + N+ G A++VFD + +++
Sbjct: 224 LSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNM 283
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESYFKE 139
+ WN+M+ Y NG + + +F M D ++ ++ + +++
Sbjct: 284 IVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSA 343
Query: 140 MGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
+ + S + N L+ + G + EA K F+ M +D +WN +I GY+ A
Sbjct: 344 IIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGA 403
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
LF++M +++G+V P+ S+ S+L G +K
Sbjct: 404 FSLFRRM----------ILDGIV---------------PDEV-----SLASILSACGNIK 433
Query: 256 EAHSYLEKYPYS-------NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+ + + S N+ + +++I Y + G++ A K + M R V N +I
Sbjct: 434 VLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIA 493
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK---IA 365
G + +E + +M+ G P TF S++ +C + LG QIH +K +
Sbjct: 494 GYALKNT-KESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLC 552
Query: 366 RNQFTTVSNAMITMY---ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
++F + +++ MY R + EFSS + I+ W ++I G + ++ AL
Sbjct: 553 GSEF--LGTSLLGMYMDSQRLADANILFSEFSS--LKSIVMWTALISGHIQNECSDVALN 608
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF-LQPRSAHYTCVVDL 481
L+ MR + PD TFV VL AC+ + GR + + F L ++ + +VD+
Sbjct: 609 LYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTS--SALVDM 666
Query: 482 LGRFGLIDEAMNLLNEI 498
+ G + ++ + E+
Sbjct: 667 YAKCGDVKSSVQVFEEL 683
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 12/276 (4%)
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
V WN + G E L+F+ SG SPD TF L+ C+ L L LGR +H+
Sbjct: 13 VRQWNWRVQGTKHYS-SERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHS 71
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI--ISWNSIICGLAYHGYA 417
IK + A+I +YA+C ++ A F+S P + +SW ++I G G
Sbjct: 72 CVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLP 131
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS-AHYT 476
+AL +F++MR PD + V VL+A G +D F M + R+ +
Sbjct: 132 HEALHIFDKMR-NSAVPDQVALVTVLNAYISLGKLDDACQLFQQMP----IPIRNVVAWN 186
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
++ + +EA+ +++ G++ S + ++L A + G + ++
Sbjct: 187 VMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIK- 245
Query: 537 EPNNSGVYLI--LTEMYLSCGRREDAKRIFAQMKEN 570
+ S +Y+ L MY C +DA+++F + +
Sbjct: 246 QGFESSIYVASSLINMYGKCQMPDDARQVFDAISQK 281
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 205/639 (32%), Positives = 319/639 (49%), Gaps = 40/639 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI---AG 61
A+ LFD++P + WN +IR Y NG D A+ L++ M + +TY V+ +G
Sbjct: 62 ARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSG 121
Query: 62 LMQSDN---VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
L+ ++ + ++F G+E DV +++ Y G++ EA R+F M +DVV+WN
Sbjct: 122 LLAIEDGVEIHSHAKMF-GLE-SDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWN 179
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR---------EGRIVEA---RK 166
+I D A +M + + + G++ G+ + R+
Sbjct: 180 AMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRR 239
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
FD V ++ Y C+ A +F M R+ SW +I G V S + A
Sbjct: 240 SFDN----GVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEA 295
Query: 227 ISYFKQM--PETCEKTWNSIISVLIRNGLV------KEAHSYLEKYPYS-NIASWTNVIV 277
+ F QM + + T ++ SVL + ++ H Y+ K +I ++
Sbjct: 296 LELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLS 355
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + G + AI+ F+ M +D ++ ++ G +N L F M+ SG PD T
Sbjct: 356 MYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTT 415
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
VL CS L L G H I T + NA+I MY++CG I A F+ +
Sbjct: 416 MLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD 475
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
HDI+SWN++I G HG +AL LF + KPDDITF+ +LS+CS++GLV +GR
Sbjct: 476 RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRL 535
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+FD M + + PR H C+VD+LGR GLIDEA + IR E +W ALL AC
Sbjct: 536 WFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHF---IRNMPFEPDVRIWSALLSAC 592
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
RIH NI++GE +++ L P ++G +++L+ +Y + GR +DA I K+ G+KK PG
Sbjct: 593 RIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPG 652
Query: 578 CSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
CSWI+IN H F+ GD SH + ++ L L E++R
Sbjct: 653 CSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKR 691
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 204/492 (41%), Gaps = 114/492 (23%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS-- 65
EAQ LF M RD V WN MI G G D+A+ L QM E + ++ I G++ +
Sbjct: 162 EAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVG 221
Query: 66 --------------------DN--VQG---------------AKEVFDGMEVRDVVTWNS 88
DN V G A+++FD M VR+ V+W++
Sbjct: 222 EAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSA 281
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVN-CQRM-DLA-----ESYFKEM 140
MI GYV + + EAL +F M LKD + V +G+++ C ++ DL+ Y ++
Sbjct: 282 MIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKL 341
Query: 141 G-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
G D+ +++ + G I +A + FD M KD +++ +++G + NG VA +F
Sbjct: 342 GXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIF 401
Query: 200 QKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
+ M D DLT+ ++ A S+ + ++G
Sbjct: 402 RMMQLSGIDPDLTTMLGVL----------PACSHLAAL----------------QHGFC- 434
Query: 256 EAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+H YL ++ N ++ Y + G++ A +VF M D+ WN MI G G +
Sbjct: 435 -SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHG 493
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
LG E L F + G PD+ TF +L+ CS H+ + R F +S
Sbjct: 494 LGMEALGLFHDLLALGLKPDDITFICLLSSCS-----------HSGLVMEGRLWFDAMSR 542
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
+FS VP IC + G A E +R F+P
Sbjct: 543 -----------------DFSIVP-----RMEHCICMVDILGRAGLIDEAHHFIRNMPFEP 580
Query: 435 DDITFVGVLSAC 446
D + +LSAC
Sbjct: 581 DVRIWSALLSAC 592
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 199/471 (42%), Gaps = 54/471 (11%)
Query: 151 MVNGLVREGRIVEARKL----FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRD 206
++ ++ + EA+K+ D + + YL V +A LF ++ +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 207 LTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR--NGLVK-----EAHS 259
+ W Q+I + D AI + M + +++ +GL+ E HS
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 260 YLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
+ + + S++ T ++ Y + G + A ++F M+ RDV WN MI G L ++
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
++ +QM+E G P+++T VL + L G+ +H ++ + + V ++
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD-FKPDDI 437
MYA+C + A F + + + +SW+++I G ++ALELF++M L D P +
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPV 313
Query: 438 TFVGVLSACS---------------------------------YA--GLVDQGRYYFDCM 462
T VL AC+ YA G++D +FD M
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXM 373
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
K S ++ +V + G A+++ ++ GI+ T +L AC
Sbjct: 374 NPK-----DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAA 428
Query: 523 IKVGEIA-GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
++ G + G ++ ++ + L +MY CG+ A+ +F +M + +
Sbjct: 429 LQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDI 479
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 59/252 (23%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PE---------- 49
I +A FD M +D+V+++ ++ G +NG A+ +F M P+
Sbjct: 363 IDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPA 422
Query: 50 -----------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
D N +I + + A+EVF+ M+ D+V+W
Sbjct: 423 CSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSW 482
Query: 87 NSMISGYVCNGLIDEALRVFH-----GMPLKDVVSWNLVIGALVNCQRMDL---AESYFK 138
N+MI GY +GL EAL +FH G+ D+ I L +C L +F
Sbjct: 483 NAMIIGYGIHGLGMEALGLFHDLLALGLKPDDIT----FICLLSSCSHSGLVMEGRLWFD 538
Query: 139 EMGARDVA------SWTIMVNGLVREGRIVEARKLFDKMP-AKDVQAWNLMIAGYLDNGC 191
M +RD + MV+ L R G I EA MP DV+ W+ +++ +
Sbjct: 539 AM-SRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKN 597
Query: 192 VGVAEDLFQKMH 203
+ + E++ +K+
Sbjct: 598 IELGEEVSKKIQ 609
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 17/174 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
+ +I A+ +F++M + D V+WN MI GY +G A+ LF+ + + D T+
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
+++ S V + FD M RD M +C GLIDEA MP
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMS-RDFSIVPRM-EHCICMVDILGRAGLIDEAHHFIRNMP 577
Query: 111 LK-DVVSWNLVIGALVNCQRMDLAESYFKE---MGARDVASWTIMVNGLVREGR 160
+ DV W+ ++ A + ++L E K+ +G ++ ++ N GR
Sbjct: 578 FEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGR 631
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 212/741 (28%), Positives = 331/741 (44%), Gaps = 129/741 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----------------- 48
+ +A +F +MP+RD ++WN +I Y + GF A LF +M
Sbjct: 78 VLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTA 137
Query: 49 ----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
+RD N++++ + ++ A++VF G+ RDVV++
Sbjct: 138 CYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSY 197
Query: 87 NSMISGYVCNGLIDEALRVF----------------------------------HGMPLK 112
N+M+ Y + E L +F H + ++
Sbjct: 198 NTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVE 257
Query: 113 DVVSWNLVIGA-----LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
+ ++ ++ +G V C +D A+ FK + RDV + ++ L + G VEA +
Sbjct: 258 EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQ 317
Query: 168 FDKM---------------------------------------PAKDVQAWNLMIAGYLD 188
+ +M + DVQ N +I+ Y
Sbjct: 318 YYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYAR 377
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSI 244
G + A +LF M RDL SW +I G A+ +KQM K T+ +
Sbjct: 378 CGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHL 437
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIAS---WTNVIVG-YFEMGEVGSAIKVFELMTTRDV 300
+S + + E S I S N ++ Y G + A VFE RDV
Sbjct: 438 LSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDV 497
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
WN MI G ++ E K F +M+ PDN TF SVL+ C + L+LG+QIH +
Sbjct: 498 ISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGR 557
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
+ + NA+I MY RCG++Q A F S+ D++SW ++I G A G KA
Sbjct: 558 ITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKA 617
Query: 421 LELFERMRLTDFKPDD-ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
+ELF +M+ F+P D TF +LSAC++AGLV +G F M+++Y + P HY C+V
Sbjct: 618 IELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLV 677
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
LLGR EA L+N++ VW LLGACRIH NI + E A ++L
Sbjct: 678 GLLGRARRFQEAETLINQM---PFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNAR 734
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
N VY++L+ +Y + GR +D +I M+ G++KEPG SWI++++ H F++ D SHP+
Sbjct: 735 NPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPE 794
Query: 600 FHRLRYLLNLLHTEIEREILF 620
+ L L E+E F
Sbjct: 795 TAEIYAELKRLSVEMEEAGYF 815
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 145/627 (23%), Positives = 273/627 (43%), Gaps = 84/627 (13%)
Query: 1 MRNARI-----QEAQNLFDKMP-QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER---- 50
MRN R ++ N P + D T+ +++ + L A + QM E
Sbjct: 1 MRNERHCGPDREDVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGP 60
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D+F N +I ++ +V A +VF M RDV++WNS+IS Y G +A ++F M
Sbjct: 61 DIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ 120
Query: 111 ----LKDVVSWNLVIGALVNCQRMD----LAESYFKEMGARDVASWTIMVNGLVREGRIV 162
+ + +++ ++ A + ++ + K RD +++ + G +
Sbjct: 121 NAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLP 180
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
AR++F + +DV ++N M+ Y V LF +M ++ K L+++
Sbjct: 181 RARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFT 240
Query: 223 IDAAISYFKQMPE-TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFE 281
+ + K++ + T E+ NS I V T ++
Sbjct: 241 TPSMLDEGKRIHKLTVEEGLNSDIRV------------------------GTALVTMCVR 276
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
G+V SA + F+ + RDV V+N +I L ++ E + + +M+ G + + T+ S+
Sbjct: 277 CGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSI 336
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L CS L+ G+ IH+ + + + NA+I+MYARCG++ A F ++P D+
Sbjct: 337 LNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDL 396
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR----- 456
ISWN+II G A +A+ L+++M+ KP +TF+ +LSAC+ + G+
Sbjct: 397 ISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHED 456
Query: 457 ------------------YYFDC---MKNKYFLQPRSAH----YTCVVDLLGRFGLIDEA 491
Y C M+ + + A + ++ + G + A
Sbjct: 457 ILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETA 516
Query: 492 MNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL------ 545
L E++ + +E + ++L C+ +++G+ R+ E SG+ L
Sbjct: 517 YKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE-----SGLQLDVNLGN 571
Query: 546 ILTEMYLSCGRREDAKRIFAQMKENGV 572
L MY+ CG +DA+ +F ++ V
Sbjct: 572 ALINMYIRCGSLQDARNVFHSLQHRDV 598
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 98/187 (52%), Gaps = 15/187 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
R + EAQN+F+ RD ++WN MI G+ ++G + A LF +M E D T+ +
Sbjct: 478 RCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFAS 537
Query: 58 VIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V++G + ++ K++ G+++ DV N++I+ Y+ G + +A VFH + +
Sbjct: 538 VLSGCKNPEALELGKQIHGRITESGLQL-DVNLGNALINMYIRCGSLQDARNVFHSLQHR 596
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEM---GAR--DVASWTIMVNGLVREGRIVEARKL 167
DV+SW +IG + A F +M G R D +++T +++ G ++E ++
Sbjct: 597 DVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQI 656
Query: 168 FDKMPAK 174
F M ++
Sbjct: 657 FSSMESE 663
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 18/193 (9%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTY 55
+R +Q+A+N+F + RD ++W MI G G A+ LF QM D T+
Sbjct: 578 IRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTF 637
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-NGLIDEALR------VFHG 108
++++ + V ++F ME V I Y C GL+ A R + +
Sbjct: 638 TSILSACNHAGLVLEGYQIFSSMESEYGVL--PTIEHYGCLVGLLGRARRFQEAETLINQ 695
Query: 109 MPL-KDVVSWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGRIVEA 164
MP D W ++GA + LAE ++ AR+ A + ++ N GR +
Sbjct: 696 MPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDV 755
Query: 165 RKLFDKMPAKDVQ 177
K+ M + ++
Sbjct: 756 AKIRRVMEGRGIR 768
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 185/595 (31%), Positives = 300/595 (50%), Gaps = 42/595 (7%)
Query: 31 YFKNGFLD---NAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWN 87
+FK+G D +C N E I L + ++ A ++ D ++ T++
Sbjct: 42 FFKSGAKDELVKRLCKDNNFKE--------AIDILCEQKRLREAIQILDHVDRPSAATYS 93
Query: 88 SMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
+++ + +DE ++V + VV N ++ + C + A+ F EM R
Sbjct: 94 TLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAER 153
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
D+ SW IM++G + GR+ EARKLFD+M +D +W M +GY+ + A +LF+ M
Sbjct: 154 DLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQ 213
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEK 263
+ FK T + ++ + L KE H ++ +
Sbjct: 214 RHE----------------------NFKCNKFTMSSALAASAAIQSLH-LGKEIHGHILR 250
Query: 264 YPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ W+ + Y + G +G A +F+ RDV W MI + EEG
Sbjct: 251 IGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFAL 310
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F + +SG P+ TF+ VL C+D +LG+Q+H +I + + ++ ++ MY +
Sbjct: 311 FSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTK 370
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CGNI++A F+ +P D++SW S+I G A +G ++AL+ FE + + +PD ITFVGV
Sbjct: 371 CGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGV 430
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
LSAC++AGLVD+G YFD +K K+ L + HY C++DLL R G + EA ++++++
Sbjct: 431 LSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKM---P 487
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
IE +W +LLG CRIH N+K+ + A E + E+EP N Y L +Y + G
Sbjct: 488 IEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAE 547
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
+ M GV K+PG SWI+I HVFL GD+SH K + L L ++ E
Sbjct: 548 VRKVMDARGVVKKPGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEE 602
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 186/436 (42%), Gaps = 77/436 (17%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ LFD+M +RD +WN+MI GY K G L A LF+QM ERD F++ + +G ++ D
Sbjct: 143 AKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQH 202
Query: 69 QGAKEVFDGMEVRDVVTWNSMI------------SGYVCNGLIDEALRVFHGMPLKDVVS 116
+ A E+F M+ + N S ++ + LR+ G+ L VV
Sbjct: 203 EEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRI--GLDLDGVV- 259
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
W+ + C + A F + RDV SWT M++ +EGR E LF + +
Sbjct: 260 WSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGI 319
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
+G L+ AE+L +++H G + RI S F
Sbjct: 320 WPNEFTFSGVLNACADHAAEELGKQVH------------GYMT--RIGFDPSSFAA---- 361
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
++++ + + G +K A P ++ SWT++I GY + G+ A++ FEL+
Sbjct: 362 -----STLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLL 416
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+SG PD+ TF VL+ C+ +D G +
Sbjct: 417 -------------------------------KSGTQPDHITFVGVLSACTHAGLVDKGLE 445
Query: 357 IHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAY 413
+ +IK T + +I + +R G +Q A +PI D W S++ G
Sbjct: 446 -YFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRI 504
Query: 414 HG---YAEKALE-LFE 425
HG A++A E LFE
Sbjct: 505 HGNLKLAKRAAEALFE 520
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 131/321 (40%), Gaps = 57/321 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTV--- 58
+ R+QEA+ LFD+M +RD +W M GY ++ + A+ LF M + F N
Sbjct: 167 KAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMS 226
Query: 59 --------IAGLMQSDNVQG-----------------------------AKEVFDGMEVR 81
I L + G A+ +FD R
Sbjct: 227 SALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDR 286
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
DVV+W +MI Y G +E +F + + ++N AE K++
Sbjct: 287 DVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVH 346
Query: 142 AR------DVASW--TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
D +S+ + +V+ + G I AR++F+ MP D+ +W +I+GY NG
Sbjct: 347 GYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPD 406
Query: 194 VAEDLFQKM----HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT-----WNSI 244
A F+ + D ++ +++ ++ +D + YF + E T + +
Sbjct: 407 EALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACL 466
Query: 245 ISVLIRNGLVKEAHSYLEKYP 265
I +L R+G ++EA ++K P
Sbjct: 467 IDLLSRSGRLQEAEDIIDKMP 487
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 318/641 (49%), Gaps = 81/641 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDM---------- 52
A+++F M QRD VT+N +I G + G+ + AM LF +M P+ +
Sbjct: 302 AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA 361
Query: 53 ------------------FTYNTVIAGLM-----QSDNVQGAKEVFDGMEVRDVVTWNSM 89
F N I G + + +++ A + F EV +VV WN M
Sbjct: 362 DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM 421
Query: 90 ISGYVCNGLIDE---ALRVFHGMPLKDVV----SWNLVIGALVNCQRMDLAESYFKEMGA 142
+ Y GL+D+ + R+F M ++++V ++ ++ + ++L E ++
Sbjct: 422 LVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 478
Query: 143 RDVA----SWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+ +++++ + G++ A + + KDV +W MIAGY A
Sbjct: 479 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 538
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
F++M DR + S + GL N+ A + K+ + + S S
Sbjct: 539 FRQMLDRGIRSDEV---GLTNAVSACAGLQALKEGQQIHAQACVSGFS------------ 583
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
P+ N ++ Y G++ + FE D WN ++ G ++ EE
Sbjct: 584 ---SDLPFQNA-----LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEE 635
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L+ FV+M G +N TF S + S+ + G+Q+HA K + T V NA+I+
Sbjct: 636 ALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALIS 695
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MYA+CG+I A +F V + +SWN+II + HG+ +AL+ F++M ++ +P+ +T
Sbjct: 696 MYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 755
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
VGVLSACS+ GLVD+G YF+ M ++Y L P+ HY CVVD+L R GL+ A + E+
Sbjct: 756 LVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEM 815
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
I+ VW LL AC +H N+++GE A ++ELEP +S Y++L+ +Y + ++
Sbjct: 816 ---PIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY-AVSKKW 871
Query: 559 DAKRIFAQ-MKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
DA+ + Q MKE GVKKEPG SWI++ + H F GD +HP
Sbjct: 872 DARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHP 912
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 147/620 (23%), Positives = 267/620 (43%), Gaps = 66/620 (10%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A +FD+MP+R TWN MI+ + LF +M ++ +G++++
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA--C 156
Query: 69 QGAKEVFDGME----------VRD-VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+G FD +E +RD V N +I Y NG +D A RVF G+ LKD SW
Sbjct: 157 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 216
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP----- 172
+I L + A F +M + + ++ + +E+ ++ +++
Sbjct: 217 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 276
Query: 173 ---AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+ D N +++ Y G + AE +F M RD ++ LINGL + A+
Sbjct: 277 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 336
Query: 230 FKQMP----ETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFE 281
FK+M E T S++ +G + ++ H+Y K +++ ++ Y +
Sbjct: 337 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 396
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
++ +A+ F +V +WNVM+ G D + F QM+ P+ T+ S+
Sbjct: 397 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 456
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA---LLEFSSVPI 398
L C L L+LG QIH+Q IK V + +I MYA+ G + +A L+ F+
Sbjct: 457 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG--- 513
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-- 456
D++SW ++I G + + +KAL F +M + D++ +SAC+ + +G+
Sbjct: 514 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 573
Query: 457 ---------------------YYFDCMKNK----YFLQPRSAH---YTCVVDLLGRFGLI 488
Y C K + F Q + + +V + G
Sbjct: 574 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 633
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL-EPNNSGVYLIL 547
+EA+ + + +GI+ + +G+ + A N+K G+ + + + + V L
Sbjct: 634 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 693
Query: 548 TEMYLSCGRREDAKRIFAQM 567
MY CG DA++ F ++
Sbjct: 694 ISMYAKCGSISDAEKQFLEV 713
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/507 (26%), Positives = 230/507 (45%), Gaps = 50/507 (9%)
Query: 17 PQRDTVTWNVMIRGYFK-NGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ----SDNVQGA 71
P T+ W ++ G K NG LD L +Q+ + + + + L ++ GA
Sbjct: 42 PNHQTLKW--LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 99
Query: 72 KEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-SWNLVIGALVNCQRM 130
+VFD M R + TWN MI LI E +F M ++V + G L C+
Sbjct: 100 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 159
Query: 131 DLAESYFKEMGAR----DVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLM 182
+A +++ AR + T++ N L+ R G + AR++FD + KD +W M
Sbjct: 160 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 219
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN 242
I+G N C A LF M+ + G++ + F + C+K
Sbjct: 220 ISGLSKNECEAEAIRLFCDMY----------VLGIMPTPYA------FSSVLSACKK--- 260
Query: 243 SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVT 301
I S+ I L H + K +S+ N +V YF +G + SA +F M+ RD
Sbjct: 261 -IESLEIGEQL----HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 315
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
+N +I GL + GE+ ++ F +M G PD+ T S++ CS TL G+Q+HA
Sbjct: 316 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 375
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
K+ + A++ +YA+C +I++AL F + +++ WN ++ +
Sbjct: 376 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 435
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNKYFLQPRSAHYTC--V 478
+F +M++ + P+ T+ +L C G ++ G + + +K + L Y C +
Sbjct: 436 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVL 491
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEV 505
+D+ + G +D A ++L IR G +V
Sbjct: 492 IDMYAKLGKLDTAWDIL--IRFAGKDV 516
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 130/322 (40%), Gaps = 64/322 (19%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------------- 50
++ A ++ + +D V+W MI GY + F D A+ F QM +R
Sbjct: 499 GKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAV 558
Query: 51 --------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
D+ N ++ + ++ + F+ E D +
Sbjct: 559 SACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI 618
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC----QRMDLAESYFKEM 140
WN+++SG+ +G +EALRVF M + + + N G+ V M + +
Sbjct: 619 AWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVI 678
Query: 141 GARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
S T + N L+ + G I +A K F ++ K+ +WN +I Y +G A
Sbjct: 679 TKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEAL 738
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRR----IDAAISYFKQM---------PETCEKTWNS 243
D F +M ++ + G++++ +D I+YF+ M PE +
Sbjct: 739 DSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE----HYVC 794
Query: 244 IISVLIRNGLVKEAHSYLEKYP 265
++ +L R GL+ A ++++ P
Sbjct: 795 VVDMLTRAGLLSRAKEFIQEMP 816
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 136/325 (41%), Gaps = 64/325 (19%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
R +I+E+ F++ D + WN ++ G+ ++G + A+ +F +M + + FT+ +
Sbjct: 598 RCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGS 657
Query: 58 VIAGLMQSDNVQGAKEV-----------------------------------FDGMEVRD 82
+ ++ N++ K+V F + ++
Sbjct: 658 AVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKN 717
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQRMDLAE---SYFK 138
V+WN++I+ Y +G EAL F M +V ++ ++G L C + L + +YF+
Sbjct: 718 EVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFE 777
Query: 139 EMGARDVAS-----WTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCV 192
M + S + +V+ L R G + A++ +MP K D W +++ + + +
Sbjct: 778 SMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNM 837
Query: 193 GVAE---DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK-----TW--- 241
+ E ++ D ++ L N S++ DA ++M E K +W
Sbjct: 838 EIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV 897
Query: 242 -NSIISVLI---RNGLVKEAHSYLE 262
NSI S + + L E H Y +
Sbjct: 898 KNSIHSFYVGDQNHPLADEIHEYFQ 922
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 177/542 (32%), Positives = 297/542 (54%), Gaps = 21/542 (3%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYF 137
D WN++I Y AL +F M D S++L++ A C R+ L E
Sbjct: 89 DPFLWNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKA---CARVCLVEEGK 145
Query: 138 KEMG---ARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
+ G ++ S ++N L+ R G I AR++FD+MP +D ++N MI GY+ +G
Sbjct: 146 QIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSG 205
Query: 191 CVGVAEDLFQKM--HDRDLTSWKQLINGLVNSRR-IDAAISYFKQMPETCEKTWNSIISV 247
+ +A +LF M D++L SW ++ G ++ I A+ F++MPE +WN+II
Sbjct: 206 TIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKMPERDLVSWNTIIGG 265
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
+ G ++ AHS + P ++ SW+N+I GY ++G++ A +F+ M +DV +N ++
Sbjct: 266 FAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTIM 325
Query: 308 FGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
G +N E L+ F +M ++S SPD T L+ S L ++ +H ++
Sbjct: 326 AGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASMHNYFLENGI 385
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+ V+ A+I MY++CG+I++A+L F V I WN++I G+A +G + A +
Sbjct: 386 SVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMARNGLGKLAFGMLLE 445
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
M KPD ITF+GVL+AC++AGLV +G F+ M+ + L+P+ HY C+VD+LG+ G
Sbjct: 446 MHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEPKLQHYGCMVDILGKAG 505
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
L++ A+ + E+ IE + +W LL AC+ H N +GE+ + +M ++ NS Y++
Sbjct: 506 LVEGALKFIEEMP---IEPNDIIWRTLLSACQNHENFTIGELIAKHLMTMDSCNSSSYVL 562
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYL 606
L+ +Y G A ++ MK+ + K PGCSWI++ H FL D SHP + +
Sbjct: 563 LSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWIELEGVVHEFLVRDKSHPYVSEIYSV 622
Query: 607 LN 608
L+
Sbjct: 623 LD 624
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 198/406 (48%), Gaps = 49/406 (12%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD-- 82
N +I Y + G ++ A +F++MP +D +YN++I G ++S + A+E+FD M + D
Sbjct: 164 NCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKN 223
Query: 83 VVTWNSMISGYV-CNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
+++WNSM+ G+ I AL +F MP +D+VSWN +IG C R++ A S F M
Sbjct: 224 LISWNSMLGGFAQTKDGIGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMP 283
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
RDV SW+ M++G + G I AR LFD+MP KDV A+N ++AGY NG A ++F +
Sbjct: 284 KRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHE 343
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M + S P+ E T +S + + G V++A S
Sbjct: 344 MQRQSNLS------------------------PD--ETTLVVALSAISQLGHVEKAASMH 377
Query: 262 EKYPYSNIASWTNVIVGYFEM----GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ + I+ V V +M G + +AI +F+ + + + WN MI G+ N LG+
Sbjct: 378 NYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMARNGLGK 437
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLGRQIHAQAIKIARNQFT 370
++M PD TF VL C+ L +L R++H K+
Sbjct: 438 LAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEPKLQH---- 493
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYH 414
M+ + + G ++ AL +PI +DII W +++ H
Sbjct: 494 --YGCMVDILGKAGLVEGALKFIEEMPIEPNDII-WRTLLSACQNH 536
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 200/408 (49%), Gaps = 31/408 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDMFTYNTV 58
+R I+ A+ +FD+MP +D+V++N MI GY K+G +D A LF+ MP ++++ ++N++
Sbjct: 171 LRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSM 230
Query: 59 IAGLMQS-DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ G Q+ D + A E+F+ M RD+V+WN++I G+ G I+ A +F+ MP +DV+SW
Sbjct: 231 LGGFAQTKDGIGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISW 290
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP----- 172
+ +I + +A + F EM +DV ++ ++ G + G EA ++F +M
Sbjct: 291 SNMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNL 350
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN----SRRIDAAIS 228
+ D + ++ G V A + + ++ ++ L++ I+ AI
Sbjct: 351 SPDETTLVVALSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAIL 410
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYFEMGE 284
F + + WN++IS + RNGL K A L + ++ ++ V+ G
Sbjct: 411 IFDGVDQKGIDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGL 470
Query: 285 VGSAIKVFELMTT-----RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
V + FELM + + M+ LG+ L E LKF +M P++ +
Sbjct: 471 VKEGLICFELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMP---IEPNDIIWR 527
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKI---ARNQFTTVSNAMITMYARCG 384
++L+ C + +G I + + + + +SN +YAR G
Sbjct: 528 TLLSACQNHENFTIGELIAKHLMTMDSCNSSSYVLLSN----IYARLG 571
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 197/649 (30%), Positives = 325/649 (50%), Gaps = 72/649 (11%)
Query: 13 FDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVI-------- 59
FD++PQ+D TWN MI Y NG A+ F Q+ D +T+ V+
Sbjct: 174 FDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD 233
Query: 60 --------------------AGLMQSDNVQG----AKEVFDGMEVRDVVTWNSMISGYVC 95
A L+ + G A+ +FD M RD+ +WN+MISG +
Sbjct: 234 GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 293
Query: 96 NGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMD------LAESYFKEMGAR-DVAS 147
NG +AL V M L+ + +++ V+ L C ++ L Y + G D+
Sbjct: 294 NGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFV 353
Query: 148 WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL 207
++N + G + +ARK F +M DV +WN +IA Y N A F KM
Sbjct: 354 SNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQ---- 409
Query: 208 TSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS 267
+NG +++ C+ + S+ ++R G + E
Sbjct: 410 ------LNGFQPDLLTLVSLASIVAQSRDCKNS-RSVHGFIMRRGWLME----------- 451
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
++ V+ Y ++G + SA KVFE++ +DV WN +I G +N L E ++ + M+
Sbjct: 452 DVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMME 511
Query: 328 ESGPS-PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
E P+ T+ S+L + + L G +IH + IK + V+ +I +Y +CG +
Sbjct: 512 ECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRL 571
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
A+ F VP ++WN+II HG+AEK L+LF M KPD +TFV +LSAC
Sbjct: 572 VDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSAC 631
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
S++G V++G++ F M+ +Y ++P HY C+VDLLGR G ++ A + ++ ++
Sbjct: 632 SHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMP---LQPD 687
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
++WGALLGACRIH NI++G+ A +R+ E++ N G Y++L+ +Y + G+ E ++ +
Sbjct: 688 ASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSL 747
Query: 567 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+E G+KK PG S I++N VF +G+ SHPK + L +L +++
Sbjct: 748 ARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMK 796
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 132/513 (25%), Positives = 218/513 (42%), Gaps = 89/513 (17%)
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----- 203
T +VN G + +R FD++P KDV WN MI+ Y+ NG A F ++
Sbjct: 155 TRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEI 214
Query: 204 DRDLTSWKQLING---LVNSRRIDA-----------------------------AISYFK 231
D ++ ++ LV+ RRI A S F
Sbjct: 215 RPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFD 274
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEA---------------------------------- 257
MP +WN++IS LI+NG +A
Sbjct: 275 DMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDIST 334
Query: 258 ----HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
H Y+ K+ +N ++ Y + G + A K F+ M DV WN +I +
Sbjct: 335 AMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQ 394
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA-RNQFTT 371
ND FFV+M+ +G PD T S+ +I + R +H ++ +
Sbjct: 395 NDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVV 454
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RLT 430
+ NA++ MYA+ G + SA F + + D+ISWN++I G A +G A +A+E+++ M
Sbjct: 455 IGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECK 514
Query: 431 DFKPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+ P+ T+V +L A ++ G + QG R + +K L A TC++D+ G+ G +
Sbjct: 515 EIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVA--TCLIDVYGKCGRLV 572
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI-KVGEIAGERVMELEPNNSGVYLILT 548
+AM+L ++ + S W A++ IH + K ++ GE + E + ++ L
Sbjct: 573 DAMSLFYQVPQE----SSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLL 628
Query: 549 EMYLSCGRREDAKRIFAQMKENGVK---KEPGC 578
G E+ K F M+E G+K K GC
Sbjct: 629 SACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGC 661
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 181/434 (41%), Gaps = 44/434 (10%)
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE--KTWNS 243
Y + G V ++ F ++ +D+ +W +I+ V++ AI F Q+ E + +
Sbjct: 161 YANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYT 220
Query: 244 IISVLIRNGLV---KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
VL G + + H + K + N+ ++I Y G G A +F+ M RD
Sbjct: 221 FPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRD 280
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
+ WN MI GL +N + L +M+ G + T S+L +C L + IH
Sbjct: 281 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHL 340
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
IK VSNA+I MYA+ GN++ A F + I D++SWNSII +
Sbjct: 341 YVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVT 400
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A F +M+L F+PD +T V + S + + R + + +L VV
Sbjct: 401 AHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVV 460
Query: 480 DLLGRFGLIDEAMNLL--------------------NEIRADGIEV------------SP 507
D+ + GL+D A + N + ++ IEV +
Sbjct: 461 DMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQ 520
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQ 566
W ++L A ++ G RV++ + + V L ++Y CGR DA +F Q
Sbjct: 521 GTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQ 580
Query: 567 MKENGVKKEPGCSW 580
V +E +W
Sbjct: 581 -----VPQESSVTW 589
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 196/493 (39%), Gaps = 89/493 (18%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-------------------- 48
A++LFD MP RD +WN MI G +NG A+ + ++M
Sbjct: 269 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQ 328
Query: 49 -------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
E D+F N +I + N++ A++ F M + DVV+WNS+
Sbjct: 329 LGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSI 388
Query: 90 ISGYVCNGLIDEALRVFHGMPLK-------DVVSWNLVIGALVNCQRMDLAESYFKEMG- 141
I+ Y N A F M L +VS ++ +C+ + G
Sbjct: 389 IAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGW 448
Query: 142 -ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
DV +V+ + G + A K+F+ + KDV +WN +I GY NG A ++++
Sbjct: 449 LMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYK 508
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
M + K++I + TW SI+ G +++
Sbjct: 509 MMEE-----CKEIIPN---------------------QGTWVSILPAYAHVGALQQGMRI 542
Query: 261 LEKYPYSN----IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
+ +N + T +I Y + G + A+ +F + WN +I G +
Sbjct: 543 HGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHA 602
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG----RQIHAQAIKIARNQFTTV 372
E+ LK F +M + G PD+ TF S+L+ CS ++ G R + IK + +
Sbjct: 603 EKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHY--- 659
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTD 431
M+ + R G ++ A +P+ D W +++ HG E L F RL +
Sbjct: 660 -GCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIE--LGKFASDRLFE 716
Query: 432 FKPDDITFVGVLS 444
++ + +LS
Sbjct: 717 VDSKNVGYYVLLS 729
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 47/253 (18%)
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
+ +HA + + Q +S ++ +YA G++ + F +P D+ +WNS+I
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193
Query: 413 YHGYAEKALELFERMRL-TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
++G+ +A+ F ++ L ++ +PD TF VL AC LVD R + C K Q
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC--GTLVDGRRIH--CWAFKLGFQWN 249
Query: 472 SAHYTCVVDLLGRFG-------LID------------------------EAMNLLNEIRA 500
++ + RFG L D +A+++L+E+R
Sbjct: 250 VFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL 309
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL------ILTEMYLSC 554
+GI+++ ++L C ++G+I+ ++ L G+ L MY
Sbjct: 310 EGIKMNFVTVVSILPVCP-----QLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKF 364
Query: 555 GRREDAKRIFAQM 567
G EDA++ F QM
Sbjct: 365 GNLEDARKAFQQM 377
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 127/303 (41%), Gaps = 68/303 (22%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ A +F+ + +D ++WN +I GY +NG A+ ++ M E
Sbjct: 469 LDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEE---------------- 512
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
KE+ + + TW S++ Y G + + +R+ HG V+ NL +
Sbjct: 513 -----CKEI-----IPNQGTWVSILPAYAHVGALQQGMRI-HG----RVIKTNLHL---- 553
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
DV T +++ + GR+V+A LF ++P + WN +I+
Sbjct: 554 ------------------DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISC 595
Query: 186 YLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPE----TC 237
+ +G LF +M D D ++ L++ +S ++ F+ M E
Sbjct: 596 HGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPS 655
Query: 238 EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS-WTNV-----IVGYFEMGEVGSAIKV 291
K + ++ +L R G ++ A+ +++ P AS W + I G E+G+ S ++
Sbjct: 656 LKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASD-RL 714
Query: 292 FEL 294
FE+
Sbjct: 715 FEV 717
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 85/196 (43%), Gaps = 15/196 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ R+ +A +LF ++PQ +VTWN +I + +G + + LF +M + D T+ +
Sbjct: 567 KCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVS 626
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVT----WNSMISGYVCNGLIDEALRVFHGMPLK- 112
+++ S V+ K F M+ + + M+ G ++ A MPL+
Sbjct: 627 LLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQP 686
Query: 113 DVVSWNLVIGALV---NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGR---IVEARK 166
D W ++GA N + A E+ +++V + ++ N G+ + + R
Sbjct: 687 DASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRS 746
Query: 167 LFDKMPAKDVQAWNLM 182
L + K W+ +
Sbjct: 747 LARERGLKKTPGWSTI 762
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 188/667 (28%), Positives = 322/667 (48%), Gaps = 82/667 (12%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTY-------- 55
+ + +FDK+ WN+++ Y K G ++ LF +M + + +T+
Sbjct: 422 QGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFA 481
Query: 56 ---------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
N++IA + V+ A +FD + DVV+WNS
Sbjct: 482 ALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNS 541
Query: 89 MISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESY----FKEM 140
MI+G V NG L +F M + D+ + V+ A N + L + K
Sbjct: 542 MINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKAC 601
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
+ +V +++ + G + A ++F KM + +W IA Y+ G A LF
Sbjct: 602 FSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFD 661
Query: 201 KMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
+M + D+ + +++ S +D + S +I+NG+
Sbjct: 662 EMQSKGVRPDIYTVTSIVHACACSSSLDKG---------------RDVHSYVIKNGM--- 703
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
SN+ +I Y + G V A VF + +D+ WN MI G +N L
Sbjct: 704 ---------GSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLP 754
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
E L+ F+ M++ PD+ T VL C+ L LD GR+IH ++ V+ A+
Sbjct: 755 NEALELFLDMQKQF-KPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACAL 813
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+ MYA+CG + A L F +P D+ISW +I G HG+ +A+ F MR+ +PD+
Sbjct: 814 VDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDE 873
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
+F +L+ACS++GL+++G +F+ M+N+ ++P+ HY CVVDLL R G + +A
Sbjct: 874 SSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKF-- 931
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
I + I+ T+WG LL CRIH+++K+ E E + ELEP+N+ Y++L +Y +
Sbjct: 932 -IESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEK 990
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
E+ K++ +M++ G K+ PGCSWI++ ++F++G+S HP+ R+ LL L +++
Sbjct: 991 WEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQN 1050
Query: 617 EILFDAY 623
E F +
Sbjct: 1051 EDYFSMF 1057
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 145/561 (25%), Positives = 248/561 (44%), Gaps = 61/561 (10%)
Query: 13 FDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDMFTYNTVIAGLMQSDNVQG 70
F T N I + + G L NA+ L + E + +Y +V+ + +++
Sbjct: 328 FTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLED 387
Query: 71 AKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
K V +G+ + D ++ YV G + + ++F + V WNL++
Sbjct: 388 GKRVHSVIISNGISI-DEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYA 446
Query: 126 NCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVEARKLFDKMP----AKDVQ 177
+ S FK+M V ++T ++ G++ E +++ + +
Sbjct: 447 KIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTA 506
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PET 236
N +IA Y G V A +LF ++ + D+ SW +ING V + + F QM
Sbjct: 507 VVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILG 566
Query: 237 CEKTWNSIISVLI------RNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAI 289
E +++SVL+ L + H + K +S ++N ++ Y + G + A
Sbjct: 567 VEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGAT 626
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
+VF M + W I L + + F +M+ G PD T TS++ C+
Sbjct: 627 EVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 686
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
+LD GR +H+ IK V+NA+I MYA+CG+++ A L FS +P+ DI+SWN++I
Sbjct: 687 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 746
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-YYFDCMKNKYFL 468
G + + +ALELF M+ FKPDDIT VL AC+ +D+GR + ++ YF
Sbjct: 747 GYSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF- 804
Query: 469 QPRSAHYTC-VVDLLGRFGLI-------------------------------DEAMNLLN 496
H C +VD+ + GL+ +EA++ N
Sbjct: 805 --SDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFN 862
Query: 497 EIRADGIEVSPTVWGALLGAC 517
E+R GIE + + +L AC
Sbjct: 863 EMRIAGIEPDESSFSVILNAC 883
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 202/513 (39%), Gaps = 125/513 (24%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTY------ 55
++ A NLFD++ + D V+WN MI G NGF N + +F QM E D+ T
Sbjct: 521 VESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVA 580
Query: 56 -----------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
NT++ + N+ GA EVF M +V+W
Sbjct: 581 WANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSW 640
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
S I+ YV GL +A+ +F M K D+ + ++ A +D
Sbjct: 641 TSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLD---------KG 691
Query: 143 RDVASWTI-------------MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
RDV S+ I ++N + G + EAR +F K+P KD+ +WN MI GY N
Sbjct: 692 RDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQN 751
Query: 190 GCVGVAEDLFQKMHDR----DLTSWKQL-----INGLVNSRRIDAAI---SYFKQMPETC 237
A +LF M + D+T L + L R I I YF + C
Sbjct: 752 SLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVAC 811
Query: 238 EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
+++ + + GL+ A + P ++ SWT
Sbjct: 812 -----ALVDMYAKCGLLVLAQLLFDMIPKKDLISWT------------------------ 842
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
VMI G G + G E + F +M+ +G PD ++F+ +L CS L+ G +
Sbjct: 843 -------VMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKF 895
Query: 358 HAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGL 411
RN+ ++ + AR GN+ A S+PI D W ++ G
Sbjct: 896 ----FNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGC 951
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
H + A ++ E + + +PD+ + VL+
Sbjct: 952 RIHHDVKLAEKVAE--HIFELEPDNTRYYVVLA 982
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 85/188 (45%), Gaps = 13/188 (6%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
++ SVL +C++ +L+ G+++H+ I + + ++ MY CG++ F +
Sbjct: 371 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI 430
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+ WN ++ A G +++ LF++M+ + TF VL + G V + +
Sbjct: 431 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 490
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLL----GRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+ Y L+ T VV+ L +FG ++ A NL +E+ E W +
Sbjct: 491 RV-----HGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS----EPDVVSWNS 541
Query: 513 LLGACRIH 520
++ C ++
Sbjct: 542 MINGCVVN 549
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 183/570 (32%), Positives = 309/570 (54%), Gaps = 30/570 (5%)
Query: 53 FTYNTVIA--GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM- 109
F + VIA L S ++ A +F+ +E + WN+MI GY A F M
Sbjct: 190 FPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMF 249
Query: 110 PLKDVVSWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVR----EGRIV 162
L+ + + AL CQ+ + ES + + ++ NGL+ G +
Sbjct: 250 QLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLK 309
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
AR++FD+ KDV W MI GY + C A ++F+ M + + + +V++
Sbjct: 310 NARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACS 369
Query: 223 IDAAISYFKQMPETCEKT--------WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTN 274
+ K++ E E+ N+++ + ++ + +A ++ ++ SWT+
Sbjct: 370 DMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTS 429
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ GY + G++ SA + F+ ++ W+ MI G +N+ +E LK F +M E G P
Sbjct: 430 MVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPI 489
Query: 335 NATFTSVLTICSDLPTLDLGRQIH-----AQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
T SVL+ C L L+LG IH + I ++ T+ NA++ MYA+CG+I +A
Sbjct: 490 EHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLS----VTLENAIVDMYAKCGSIDAA 545
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
FS++P ++ISWN++I G A +G A++A+ +F++MR F+P++ITFV +L+ACS+
Sbjct: 546 TEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHG 605
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
GL+ +GR YFD M+ KY ++P HY C+VDLLGR GL++EA L+ + E +
Sbjct: 606 GLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAA--- 662
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
WGALL ACR+H N+++ ++ ++ L+P +SG+Y++L + + D +R+ + MK+
Sbjct: 663 WGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKD 722
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
GVKK PG S I+I+ G FL D SHP+
Sbjct: 723 KGVKKIPGYSLIEIDGGFVEFLVADESHPQ 752
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 207/495 (41%), Gaps = 72/495 (14%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGY-------FKNGFLDNAMCLFNQMPER-------- 50
+ A +F+++ Q +T WN MIRGY F F L +M R
Sbjct: 207 LHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKA 266
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
++ N +I + ++ A++VFD +DVVTW
Sbjct: 267 CQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTW 326
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEMGA 142
+MI GY + +EA+ VF M L V V+ V+ A + +++ + +++
Sbjct: 327 TTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEE 386
Query: 143 RDVASWTIMVNGL----VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+++ + N L V+ +V+AR+LFD+M KDV +W M+ GY G + A
Sbjct: 387 KNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRF 446
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE----TCEKTWNSIISV---LIRN 251
F + ++ W +I G + + ++ F +M E E T S++S L
Sbjct: 447 FDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCL 506
Query: 252 GLVKEAHSYL---EKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
L H Y + P S + N IV Y + G + +A +VF M R++ WN MI
Sbjct: 507 NLGDWIHQYFVVGKIIPLS--VTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMI 564
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI-----HAQAI 362
G N ++ + F QM+ G P+N TF S+LT CS + GR+ I
Sbjct: 565 AGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGI 624
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI-ISWNSIICGLAYHGYAEKAL 421
K R + M+ + R G ++ A +++P+ +W +++ HG E L
Sbjct: 625 KPERGHYA----CMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVE--L 678
Query: 422 ELFERMRLTDFKPDD 436
L P+D
Sbjct: 679 ARLSAHNLLRLDPED 693
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 25/198 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
I A +F MP+R+ ++WN MI GY NG A+ +F+QM E + T+ +++
Sbjct: 542 IDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTA 601
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVT-----WNSMISGYVCNGLIDEALRVFHGMPLKDV-V 115
+ +E FD ME + + + M+ GL++EA ++ MP++
Sbjct: 602 CSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEA 661
Query: 116 SWNLVIGALVNCQRMD-------LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
+W GAL+N RM L+ + D + ++ N + + + R++
Sbjct: 662 AW----GALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVR 717
Query: 169 DKMPAKDVQAWNLMIAGY 186
M K V+ I GY
Sbjct: 718 SLMKDKGVKK----IPGY 731
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 318/641 (49%), Gaps = 81/641 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDM---------- 52
A+++F M QRD VT+N +I G + G+ + AM LF +M P+ +
Sbjct: 342 AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA 401
Query: 53 ------------------FTYNTVIAGLM-----QSDNVQGAKEVFDGMEVRDVVTWNSM 89
F N I G + + +++ A + F EV +VV WN M
Sbjct: 402 DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM 461
Query: 90 ISGYVCNGLIDE---ALRVFHGMPLKDVV----SWNLVIGALVNCQRMDLAESYFKEMGA 142
+ Y GL+D+ + R+F M ++++V ++ ++ + ++L E ++
Sbjct: 462 LVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 143 RDVA----SWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+ +++++ + G++ A + + KDV +W MIAGY A
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 578
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
F++M DR + S + GL N+ A + K+ + + S S
Sbjct: 579 FRQMLDRGIRSDEV---GLTNAVSACAGLQALKEGQQIHAQACVSGFS------------ 623
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
P+ N ++ Y G++ + FE D WN ++ G ++ EE
Sbjct: 624 ---SDLPFQNA-----LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEE 675
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L+ FV+M G +N TF S + S+ + G+Q+HA K + T V NA+I+
Sbjct: 676 ALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALIS 735
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MYA+CG+I A +F V + +SWN+II + HG+ +AL+ F++M ++ +P+ +T
Sbjct: 736 MYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 795
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
VGVLSACS+ GLVD+G YF+ M ++Y L P+ HY CVVD+L R GL+ A + E+
Sbjct: 796 LVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEM 855
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
I+ VW LL AC +H N+++GE A ++ELEP +S Y++L+ +Y + ++
Sbjct: 856 ---PIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY-AVSKKW 911
Query: 559 DAKRIFAQ-MKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
DA+ + Q MKE GVKKEPG SWI++ + H F GD +HP
Sbjct: 912 DARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHP 952
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 147/620 (23%), Positives = 267/620 (43%), Gaps = 66/620 (10%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A +FD+MP+R TWN MI+ + LF +M ++ +G++++
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA--C 196
Query: 69 QGAKEVFDGME----------VRD-VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+G FD +E +RD V N +I Y NG +D A RVF G+ LKD SW
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP----- 172
+I L + A F +M + + ++ + +E+ ++ +++
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 173 ---AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+ D N +++ Y G + AE +F M RD ++ LINGL + A+
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 230 FKQMP----ETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFE 281
FK+M E T S++ +G + ++ H+Y K +++ ++ Y +
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
++ +A+ F +V +WNVM+ G D + F QM+ P+ T+ S+
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA---LLEFSSVPI 398
L C L L+LG QIH+Q IK V + +I MYA+ G + +A L+ F+
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG--- 553
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-- 456
D++SW ++I G + + +KAL F +M + D++ +SAC+ + +G+
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 457 ---------------------YYFDCMKNK----YFLQPRSAH---YTCVVDLLGRFGLI 488
Y C K + F Q + + +V + G
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 673
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL-EPNNSGVYLIL 547
+EA+ + + +GI+ + +G+ + A N+K G+ + + + + V L
Sbjct: 674 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 733
Query: 548 TEMYLSCGRREDAKRIFAQM 567
MY CG DA++ F ++
Sbjct: 734 ISMYAKCGSISDAEKQFLEV 753
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/507 (26%), Positives = 230/507 (45%), Gaps = 50/507 (9%)
Query: 17 PQRDTVTWNVMIRGYFK-NGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ----SDNVQGA 71
P T+ W ++ G K NG LD L +Q+ + + + + L ++ GA
Sbjct: 82 PNHQTLKW--LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 72 KEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-SWNLVIGALVNCQRM 130
+VFD M R + TWN MI LI E +F M ++V + G L C+
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 131 DLAESYFKEMGAR----DVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLM 182
+A +++ AR + T++ N L+ R G + AR++FD + KD +W M
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN 242
I+G N C A LF M+ + G++ + F + C+K
Sbjct: 260 ISGLSKNECEAEAIRLFCDMY----------VLGIMPTPYA------FSSVLSACKK--- 300
Query: 243 SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVT 301
I S+ I L H + K +S+ N +V YF +G + SA +F M+ RD
Sbjct: 301 -IESLEIGEQL----HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 355
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
+N +I GL + GE+ ++ F +M G PD+ T S++ CS TL G+Q+HA
Sbjct: 356 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 415
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
K+ + A++ +YA+C +I++AL F + +++ WN ++ +
Sbjct: 416 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 475
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNKYFLQPRSAHYTC--V 478
+F +M++ + P+ T+ +L C G ++ G + + +K + L Y C +
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVL 531
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEV 505
+D+ + G +D A ++L IR G +V
Sbjct: 532 IDMYAKLGKLDTAWDIL--IRFAGKDV 556
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 130/322 (40%), Gaps = 64/322 (19%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------------- 50
++ A ++ + +D V+W MI GY + F D A+ F QM +R
Sbjct: 539 GKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAV 598
Query: 51 --------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
D+ N ++ + ++ + F+ E D +
Sbjct: 599 SACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI 658
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC----QRMDLAESYFKEM 140
WN+++SG+ +G +EALRVF M + + + N G+ V M + +
Sbjct: 659 AWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVI 718
Query: 141 GARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
S T + N L+ + G I +A K F ++ K+ +WN +I Y +G A
Sbjct: 719 TKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEAL 778
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRR----IDAAISYFKQM---------PETCEKTWNS 243
D F +M ++ + G++++ +D I+YF+ M PE +
Sbjct: 779 DSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE----HYVC 834
Query: 244 IISVLIRNGLVKEAHSYLEKYP 265
++ +L R GL+ A ++++ P
Sbjct: 835 VVDMLTRAGLLSRAKEFIQEMP 856
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 136/325 (41%), Gaps = 64/325 (19%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
R +I+E+ F++ D + WN ++ G+ ++G + A+ +F +M + + FT+ +
Sbjct: 638 RCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGS 697
Query: 58 VIAGLMQSDNVQGAKEV-----------------------------------FDGMEVRD 82
+ ++ N++ K+V F + ++
Sbjct: 698 AVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKN 757
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQRMDLAE---SYFK 138
V+WN++I+ Y +G EAL F M +V ++ ++G L C + L + +YF+
Sbjct: 758 EVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFE 817
Query: 139 EMGARDVAS-----WTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCV 192
M + S + +V+ L R G + A++ +MP K D W +++ + + +
Sbjct: 818 SMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNM 877
Query: 193 GVAE---DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK-----TW--- 241
+ E ++ D ++ L N S++ DA ++M E K +W
Sbjct: 878 EIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV 937
Query: 242 -NSIISVLI---RNGLVKEAHSYLE 262
NSI S + + L E H Y +
Sbjct: 938 KNSIHSFYVGDQNHPLADEIHEYFQ 962
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 206/644 (31%), Positives = 322/644 (50%), Gaps = 50/644 (7%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI---AG 61
A+ LFD++P + WN +IR Y NG D A+ L++ M + +TY V+ +G
Sbjct: 62 ARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSG 121
Query: 62 LMQSDN---VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
L+ ++ + ++F G+E DV +++ Y G++ EA R+F M +DVV+WN
Sbjct: 122 LLAIEDGVEIHSHAKMF-GLE-SDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWN 179
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR---------EGRIVEA---RK 166
+I D A +M + + + G++ G+ + R+
Sbjct: 180 AMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRR 239
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
FD V ++ Y C+ A +F M R+ SW +I G V S + A
Sbjct: 240 SFDN----GVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEA 295
Query: 227 ISYFKQM--PETCEKTWNSIISVLIRNGLV------KEAHSYLEKYPYSNIASWTNVIVG 278
+ F QM + + T ++ SVL + ++ H Y+ K + S ++++G
Sbjct: 296 LELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK-----LGSVLDILLG 350
Query: 279 ------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
Y + G + AI+ F+ M +D ++ ++ G +N L F M+ SG
Sbjct: 351 NTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGID 410
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD T VL CS L L G H I T + NA+I MY++CG I A
Sbjct: 411 PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREV 470
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F+ + HDI+SWN++I G HG +AL LF + KPDDITF+ +LS+CS++GLV
Sbjct: 471 FNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLV 530
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+GR +FD M + + PR H C+VD+LGR GLIDEA + IR E +W A
Sbjct: 531 MEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHF---IRNMPFEPDVRIWSA 587
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LL ACRIH NI++GE +++ L P ++G +++L+ +Y + GR +DA I K+ G+
Sbjct: 588 LLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGL 647
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
KK PGCSWI+IN H F+ GD SH + ++ L L E++R
Sbjct: 648 KKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKR 691
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 206/492 (41%), Gaps = 114/492 (23%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS-- 65
EAQ LF M RD V WN MI G G D+A+ L QM E + ++ I G++ +
Sbjct: 162 EAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVG 221
Query: 66 --------------------DN--VQG---------------AKEVFDGMEVRDVVTWNS 88
DN V G A+++FD M VR+ V+W++
Sbjct: 222 EAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSA 281
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVN-CQRM-DLA-----ESYFKEM 140
MI GYV + + EAL +F M LKD + V +G+++ C ++ DL+ Y ++
Sbjct: 282 MIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKL 341
Query: 141 GA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
G+ D+ +++ + G I +A + FD+M KD +++ +++G + NG VA +F
Sbjct: 342 GSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIF 401
Query: 200 QKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
+ M D DLT+ ++ A S+ + ++G
Sbjct: 402 RMMQLSGIDPDLTTMLGVL----------PACSHLAAL----------------QHGFC- 434
Query: 256 EAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+H YL ++ N ++ Y + G++ A +VF M D+ WN MI G G +
Sbjct: 435 -SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHG 493
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
LG E L F + G PD+ TF +L+ CS H+ + R F +S
Sbjct: 494 LGMEALGLFHDLLALGLKPDDITFICLLSSCS-----------HSGLVMEGRLWFDAMSR 542
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
+FS VP IC + G A E +R F+P
Sbjct: 543 -----------------DFSIVP-----RMEHCICMVDILGRAGLIDEAHHFIRNMPFEP 580
Query: 435 DDITFVGVLSAC 446
D + +LSAC
Sbjct: 581 DVRIWSALLSAC 592
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 199/471 (42%), Gaps = 54/471 (11%)
Query: 151 MVNGLVREGRIVEARKL----FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRD 206
++ ++ + EA+K+ D + + YL V +A LF ++ +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 207 LTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR--NGLVK-----EAHS 259
+ W Q+I + D AI + M + +++ +GL+ E HS
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 260 YLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
+ + + S++ T ++ Y + G + A ++F M+ RDV WN MI G L ++
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
++ +QM+E G P+++T VL + L G+ +H ++ + + V ++
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD-FKPDDI 437
MYA+C + A F + + + +SW+++I G ++ALELF++M L D P +
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPV 313
Query: 438 TFVGVLSACS---------------------------------YA--GLVDQGRYYFDCM 462
T VL AC+ YA G++D +FD M
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEM 373
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
K S ++ +V + G A+++ ++ GI+ T +L AC
Sbjct: 374 NPK-----DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAA 428
Query: 523 IKVGEIA-GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
++ G + G ++ ++ + L +MY CG+ A+ +F +M + +
Sbjct: 429 LQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDI 479
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PE---------- 49
I +A FD+M +D+V+++ ++ G +NG A+ +F M P+
Sbjct: 363 IDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPA 422
Query: 50 -----------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
D N +I + + A+EVF+ M+ D+V+W
Sbjct: 423 CSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSW 482
Query: 87 NSMISGYVCNGLIDEALRVFH-----GMPLKDVVSWNLVIGALVNCQRMDL---AESYFK 138
N+MI GY +GL EAL +FH G+ D+ I L +C L +F
Sbjct: 483 NAMIIGYGIHGLGMEALGLFHDLLALGLKPDDIT----FICLLSSCSHSGLVMEGRLWFD 538
Query: 139 EMGARDVA------SWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGC 191
M +RD + MV+ L R G I EA MP + DV+ W+ +++ +
Sbjct: 539 AM-SRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKN 597
Query: 192 VGVAEDLFQKMH 203
+ + E++ +K+
Sbjct: 598 IELGEEVSKKIQ 609
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 17/174 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
+ +I A+ +F++M + D V+WN MI GY +G A+ LF+ + + D T+
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
+++ S V + FD M RD M +C GLIDEA MP
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMS-RDFSIVPRM-EHCICMVDILGRAGLIDEAHHFIRNMP 577
Query: 111 LK-DVVSWNLVIGALVNCQRMDLAESYFKE---MGARDVASWTIMVNGLVREGR 160
+ DV W+ ++ A + ++L E K+ +G ++ ++ N GR
Sbjct: 578 FEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGR 631
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 275/521 (52%), Gaps = 12/521 (2%)
Query: 108 GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
G + N +IG C R A F +M R++ SW M+ G + G + ARKL
Sbjct: 92 GFKRPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKL 151
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRI 223
FD+M KDV +WN ++ Y GC A L++ D+ S+ ++ V + +
Sbjct: 152 FDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKEL 211
Query: 224 DAAISYFKQMPETCEKT----WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
A Q+ + +SI+ + G ++ A + ++ +I +WT ++ GY
Sbjct: 212 QLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGY 271
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G++ SA ++F M ++ W+ +I G N LG E L +F +M + G +P+ TF+
Sbjct: 272 AKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFS 331
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP-I 398
S L C+ + L G+Q+H I+ T V +++I MY++CG ++++ F +
Sbjct: 332 SCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNK 391
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
D++ WN++I LA +G+ EKA+++F M + KPD ITF+ +LSACS++GLV +G +
Sbjct: 392 QDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRF 451
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F M + + P HY+C++DLLGR G E L+NE+ + VW ALLG CR
Sbjct: 452 FKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVE---LVNELENMSCKPDDRVWSALLGVCR 508
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
IHNNI++G ERV+EL+P +S Y+ L +Y G+ E +++ M E ++KE G
Sbjct: 509 IHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGI 568
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREIL 619
SWI + + H F++ D HP + LL L E + L
Sbjct: 569 SWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTEEDFL 609
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 181/347 (52%), Gaps = 25/347 (7%)
Query: 21 TVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
T+ N +I YF+ G A +F++M R+++++N ++AG + +V A+++FD M
Sbjct: 98 TIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMME 157
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESY 136
+DVV+WN+++ Y G +EA+ ++ D+ S+ V+ V + + LA+
Sbjct: 158 KDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQV 217
Query: 137 FKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
++ S ++ + +V + G + AR LFD+M KD+ AW +++GY G +
Sbjct: 218 HGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDM 277
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIIS 246
A +LF +M +++ SW LI+G + A+ YF +M PE + T++S +
Sbjct: 278 NSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPE--QYTFSSCLC 335
Query: 247 VL-----IRNGLVKEAHSYL-EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR-D 299
+++G K+ H YL Y N +++I Y + G + ++ VF LM + D
Sbjct: 336 ACASIAALKHG--KQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQD 393
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
V VWN MI L +N GE+ ++ F M ESG PD TF +L+ CS
Sbjct: 394 VVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACS 440
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 177/411 (43%), Gaps = 34/411 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAG 61
+ A+ LFD+M ++D V+WN ++ Y K G + A+ L+ DM F++ V+
Sbjct: 145 VNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLIL 204
Query: 62 LMQSDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
++ +Q AK+V + V ++V +S++ Y G + A +F M +KD+ +W
Sbjct: 205 CVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAW 264
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
++ M+ A F +M ++ SW+ +++G R EA F KM
Sbjct: 265 TTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKM-----M 319
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW-------------KQLINGLVNSRRID 224
+ + Y + C+ + H + + + LI+ ++
Sbjct: 320 KFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLE 379
Query: 225 AAISYFKQMPETCE-KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGY 279
A+ F M + WN++IS L +NG ++A S + ++ ++
Sbjct: 380 ASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSAC 439
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG--LKFFVQMKESGPSPDNAT 337
G V ++ F+ MT + + + LG G ++ +++ PD+
Sbjct: 440 SHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRV 499
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
++++L +C ++LGR++ + I++ + Q + ++ ++YA G +S
Sbjct: 500 WSALLGVCRIHNNIELGRKVAERVIEL-KPQSSAAYVSLASLYAFLGKWES 549
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 193/631 (30%), Positives = 327/631 (51%), Gaps = 36/631 (5%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG--- 61
A ++F+KM DT WNV+IRGY NG A+ + +M D FT+ VI
Sbjct: 77 ALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGE 136
Query: 62 ---LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
LM V G K + G ++ DV N +I Y+ G I+ A +VF MP++D+VSWN
Sbjct: 137 LLALMVGQKVHG-KLIKIGFDL-DVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWN 194
Query: 119 -LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGL--------VREGRIVEARKLFD 169
+V G ++ + + + + + A M++ L +R G + + +
Sbjct: 195 SMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRS 254
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
++ D+ +I Y G V AE +F +++ +++ +W +I G+ ++ +
Sbjct: 255 ELEL-DIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKVIPDVIT 313
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
+ +C ++ + I +++ PY + T ++ Y + GE+ A
Sbjct: 314 MINLLPSCSQSGALLEGKSIHGFAIRKMF-----LPY--LVLETALVDMYGKCGELKLAE 366
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
VF M +++ WN M+ +N+ +E LK F + PD T SVL ++L
Sbjct: 367 HVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELA 426
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
+ G+QIH+ +K+ T +SNA++ MYA+CG++Q+A F + D++SWN++I
Sbjct: 427 SRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIM 486
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
A HG+ +++ F MR FKP+ TFV +L+ACS +GL+D+G +F+ MK +Y +
Sbjct: 487 AYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGID 546
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLGACRIHNNIKVGE 527
P HY C++DLLGR G +DEA + E + + PT +WG+LL A R HN++ + E
Sbjct: 547 PGIEHYGCMLDLLGRNGNLDEAKCFIEE-----MPLVPTARIWGSLLAASRNHNDVVLAE 601
Query: 528 IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGG 587
+A ++ L+ +N+G Y++L+ MY GR ED RI MKE G+ K GCS + IN
Sbjct: 602 LAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDINGRS 661
Query: 588 HVFLSGDSSHPKFHRLRYLLNLLHTEIEREI 618
F++ D SH + + +L++L +I +I
Sbjct: 662 ESFINQDRSHAHTNLIYDVLDILLKKIGEDI 692
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 158/346 (45%), Gaps = 34/346 (9%)
Query: 250 RNGLVKEAHSYLEKYPYS--NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
++ +K A S P + N + T + G+ E G +G+A+ +FE M D +WNV+I
Sbjct: 37 KSPFIKRAQSKTSFKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVII 96
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
G N L +E + F+ +M+ G DN TF V+ C +L L +G+++H + IKI +
Sbjct: 97 RGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFD 156
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
V N +I MY + G I+ A F +P+ D++SWNS++ G G +L F+ M
Sbjct: 157 LDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEM 216
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
K D + L ACS + G C + L+ T ++D+ G+ G
Sbjct: 217 LRLGNKADRFGMISALGACSIEHCLRSG-MEIHCQVIRSELELDIMVQTSLIDMYGKCGK 275
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP--NNSGV-- 543
+D A + N I + I W A++G + + + I ++ L P + SG
Sbjct: 276 VDYAERVFNRIYSKNI----VAWNAMIGGMQEDDKVIPDVIT---MINLLPSCSQSGALL 328
Query: 544 ----------------YLI----LTEMYLSCGRREDAKRIFAQMKE 569
YL+ L +MY CG + A+ +F QM E
Sbjct: 329 EGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNE 374
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 199/435 (45%), Gaps = 41/435 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNG-FLDNAMCLFNQM----PERDMFTYNTVIA 60
I+ A+ +FD+MP RD V+WN M+ GY +G L + MC F +M + D F + +
Sbjct: 175 IELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMC-FKEMLRLGNKADRFGMISALG 233
Query: 61 GLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
++ E+ +E+ D++ S+I Y G +D A RVF+ + K++V
Sbjct: 234 ACSIEHCLRSGMEIHCQVIRSELEL-DIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIV 292
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL----FDKM 171
+WN +IG + ++ DV + ++ + G ++E + + KM
Sbjct: 293 AWNAMIGGMQEDDKV-----------IPDVITMINLLPSCSQSGALLEGKSIHGFAIRKM 341
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
+ ++ Y G + +AE +F +M+++++ SW ++ V + + A+ F+
Sbjct: 342 FLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQ 401
Query: 232 Q-MPETCEKTWNSIISVLIRNGLV------KEAHSYLEKYPYSNIASWTNVIV-GYFEMG 283
+ E + +I SVL + K+ HSY+ K + +N IV Y + G
Sbjct: 402 HILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCG 461
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
++ +A + F+ M +DV WN MI + G ++FF +M+ G P+ +TF S+LT
Sbjct: 462 DLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLT 521
Query: 344 ICSDLPTLDLGRQ-IHAQAIKIARNQFTTVSNAMITMYARCGNIQSA---LLEFSSVPIH 399
CS +D G ++ ++ + M+ + R GN+ A + E VP
Sbjct: 522 ACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTA 581
Query: 400 DIISWNSIICGLAYH 414
I W S++ H
Sbjct: 582 RI--WGSLLAASRNH 594
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 28/342 (8%)
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN 242
+ G++++G +G A D+F+KM+ D W +I G N+ AI ++ +M ++ N
Sbjct: 65 LCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDN 124
Query: 243 SIISVLIRNG-------LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFEL 294
+I+ + ++ H L K + N ++ Y ++G + A KVF+
Sbjct: 125 FTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDE 184
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
M RD+ WN M+ G + G L F +M G D S L CS L G
Sbjct: 185 MPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSG 244
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
+IH Q I+ V ++I MY +CG + A F+ + +I++WN++I G+
Sbjct: 245 MEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQED 304
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
+K + PD IT + +L +CS +G + +G+ K FL P
Sbjct: 305 ---DKVI------------PDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFL-PYLVL 348
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
T +VD+ G+ G + A ++ N++ E + W ++ A
Sbjct: 349 ETALVDMYGKCGELKLAEHVFNQMN----EKNMVSWNTMVAA 386
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 140/308 (45%), Gaps = 47/308 (15%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFK-NGFLDNAMCLFNQMPE----------- 49
+ ++ A+ +F+++ ++ V WN MI G + + + + + + N +P
Sbjct: 272 KCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKVIPDVITMINLLPSCSQSGALLEGK 331
Query: 50 -------RDMFTYNTVIAGLM-----QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNG 97
R MF V+ + + ++ A+ VF+ M +++V+WN+M++ YV N
Sbjct: 332 SIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNE 391
Query: 98 LIDEALRVFHGM---PLK-DVVSWNLVIGALVNCQRMDLAE---SYFKEMGARDVASWTI 150
EAL++F + PLK D ++ V+ A+ + SY ++G + S T
Sbjct: 392 QYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLG---LGSNTF 448
Query: 151 MVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRD 206
+ N +V + G + AR+ FD M KDV +WN MI Y +G + F +M +
Sbjct: 449 ISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKG 508
Query: 207 L----TSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLIRNGLVKEA 257
+++ L+ S ID +F M + + + ++ +L RNG + EA
Sbjct: 509 FKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEA 568
Query: 258 HSYLEKYP 265
++E+ P
Sbjct: 569 KCFIEEMP 576
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 195/618 (31%), Positives = 315/618 (50%), Gaps = 72/618 (11%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N +I Y K G L +A +F+ P D +YN +I+G ++S + A E+FD M V+ V
Sbjct: 105 NSLINMYGKCGLLVDAKSIFDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCV 164
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
++ +MI G+ N ++A+ +F M VV + I LV+ A S+F + A
Sbjct: 165 SYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVS------AYSHFGGIWACR 218
Query: 145 V----------ASWTIMVNGLVRE----GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
+ + ++ L+R +VEAR LFD+MP K++ +WN+M+ GY G
Sbjct: 219 MLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAG 278
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-------------- 236
V A +F+++ ++DL +W +I+G V RI+ A+ ++ M
Sbjct: 279 FVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLIS 338
Query: 237 -CEKTW------------------------NSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
C +T ++II + G + EA N+AS
Sbjct: 339 GCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVAS 398
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
W +I GY + A+++F M RDV W+ MI G +N+ L+ F +M SG
Sbjct: 399 WNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGI 458
Query: 332 SPDNATFTSVLTICSDLPTLDLGR----QIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
P+ T SVL+ + TL GR +H +I ++ N +S A+I MYA+CG+I
Sbjct: 459 KPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDN----LSAAIIDMYAKCGSIN 514
Query: 388 SALLEFSSV--PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+AL F + + WN+IICGLA HG+A +L++F + K + ITF+GVL+A
Sbjct: 515 NALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTA 574
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
C + GLV+ G+ +F MK+++ + P HY C+VDLLGR G ++EA + IR+ ++
Sbjct: 575 CCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEM---IRSMPMKA 631
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
+WG LL ACR H N+ VGE A E + LEP++ ++L+ MY G+ EDA +
Sbjct: 632 DVVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRR 691
Query: 566 QMKENGVKKEPGCSWIQI 583
M+ + +++ PG S + +
Sbjct: 692 AMQSHRMQRLPGYSGVAL 709
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 123/521 (23%), Positives = 225/521 (43%), Gaps = 95/521 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+++ ++ A LFD+MP + V++ MI G+ +N + A+ LF QM + IA
Sbjct: 143 VKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIA 202
Query: 61 GLMQSDNVQG---------------------------------------AKEVFDGMEVR 81
L+ + + G A+ +FD M +
Sbjct: 203 TLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEK 262
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
++V+WN M++GY G +D A VF +P KD+V+W +I V +R++ A ++ M
Sbjct: 263 NIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMI 322
Query: 142 ARDVASWTIMVNGLVRE---------------------------------------GRIV 162
+ +M+ L+ GRI
Sbjct: 323 SAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRIN 382
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
EA F ++V +WN +IAGY+ N + A +LF +M +RD+ SW +I+G + +
Sbjct: 383 EACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQ 442
Query: 223 IDAAISYFKQMPETC----EKTWNSIISVLIRNGLVKE---AHSYLEKYPYSNIASWTNV 275
+ A+ F +M + E T S++S + +G +KE AH Y+ + + +
Sbjct: 443 PNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAA 502
Query: 276 IVG-YFEMGEVGSAIKVFELMTTRDVTV--WNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
I+ Y + G + +A++VF + + TV WN +I GL + LK F ++
Sbjct: 503 IIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIK 562
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSAL 390
+ TF VLT C + ++ G++ H ++K + + + M+ + R G ++ A
Sbjct: 563 LNAITFIGVLTACCHVGLVESGKR-HFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAE 621
Query: 391 LEFSSVPIH-DIISWNSIICGLAYHG---YAEKALELFERM 427
S+P+ D++ W +++ HG E+A E R+
Sbjct: 622 EMIRSMPMKADVVIWGTLLAACRTHGNVDVGERAAENLARL 662
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 88/236 (37%), Gaps = 39/236 (16%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
S L CSD L G+QIH K + N++I MY +CG + A F
Sbjct: 68 VLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFDVC 127
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
P D +S+N +I G G + A ELF+ M + +++ ++ S +Q
Sbjct: 128 PRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGC----VSYTTMIMGFSQNECWNQAV 183
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
F M+N + P +V FG +W A
Sbjct: 184 ELFKQMRNVGVV-PNEVTIATLVSAYSHFG---------------------GIW-----A 216
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
CR+ + + + + E V+ V L MY C +A+ +F +M E +
Sbjct: 217 CRMLHGLVIKMLFEEFVL--------VSTNLLRMYCVCSSLVEARALFDEMPEKNI 264
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 280/548 (51%), Gaps = 53/548 (9%)
Query: 71 AKEVFDGME--VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQ 128
++ VFD + D N+M+ Y G +AL F MP +D +++ +I AL
Sbjct: 403 SRRVFDAIRDPHADAFLANTMLRAYALGGAPRDALAAFSAMPRRDSFTYSFLIKAL---- 458
Query: 129 RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD 188
A VA + + +V+ G + +D N +I Y
Sbjct: 459 ------------SAAGVAPVRAVHSHVVKLGSV------------EDTFVGNALIDAYSK 494
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL 248
NG A +F +M +RD+ SW + +V + A F +MPE +WN+I+
Sbjct: 495 NGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGARKLFDEMPEKDTVSWNTILDGY 554
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+ G V+ A ++ P N+ SW+ ++ GY + G++ A +F+ M +++ W +M
Sbjct: 555 TKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPGKNLVTWTIM-- 612
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
MKE+ D A S+L C++ +L LG++IH K +
Sbjct: 613 -----------------MKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGR 655
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERM 427
T V NA+I M+ +CG + A F + + D +SWNSII G A HG+ +KALELF +M
Sbjct: 656 STHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQM 715
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
+ F PD +T + VLSAC++ G VD+GR YF M+ Y + P+ HY C++DLLGR GL
Sbjct: 716 KQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHYGCMIDLLGRGGL 775
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLIL 547
I EA++L+ + + EV +WG+LL ACR+H N++ EIA + +L+P+N+G Y +L
Sbjct: 776 IKEAVDLIKSMPWEPNEV---IWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVL 832
Query: 548 TEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
+ +Y G+ D + QMK G +K G SW+++N+ H F GD H ++ ++
Sbjct: 833 SNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMV 892
Query: 608 NLLHTEIE 615
+ L + ++
Sbjct: 893 DRLSSHVK 900
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 208/455 (45%), Gaps = 37/455 (8%)
Query: 6 IQEAQNLFDKM--PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+ ++ +FD + P D N M+R Y G +A+ F+ MP RD FTY+ +I L
Sbjct: 400 LPSSRRVFDAIRDPHADAFLANTMLRAYALGGAPRDALAAFSAMPRRDSFTYSFLIKAL- 458
Query: 64 QSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+ V + V + V D N++I Y NG +A +VF MP +DVVSWN
Sbjct: 459 SAAGVAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNT 518
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
+ A+V + A F EM +D SW +++G + G + A +LF +MP ++V +W
Sbjct: 519 AMAAMVREGELAGARKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSW 578
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
+ M++GY G + +A +F KM ++L +W ++ + A +S E+
Sbjct: 579 STMVSGYCKKGDLEMARVIFDKMPGKNLVTWTIMMKEASVELDVAAVVSILAACAESGSL 638
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF-EMGEVGSAIKVFELMTT- 297
+ L K H Y+ K N ++ F + G V A VF+ T
Sbjct: 639 S------------LGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQ 686
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
+D WN +I G + G++ L+ F QMK+ G +PD T +VL+ C+ + +D GR+
Sbjct: 687 KDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRY 746
Query: 358 HAQAIKIARNQFTTVS----NAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLA 412
+ + R+ MI + R G I+ A+ S+P + + W S++
Sbjct: 747 FSN---MERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACR 803
Query: 413 YHG---YAEKALELFERMRLTDFKPDDITFVGVLS 444
H YAE A+ L+ +P + VLS
Sbjct: 804 LHKNVEYAEIAVN-----ELSKLQPSNAGNYAVLS 833
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 149/297 (50%), Gaps = 34/297 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N +A+ +FD+MP+RD V+WN + + G L A LF++MPE+D ++NT++ G
Sbjct: 494 KNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGARKLFDEMPEKDTVSWNTILDG 553
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-- 119
++ V+ A E+F M R+VV+W++M+SGY G ++ A +F MP K++V+W +
Sbjct: 554 YTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPGKNLVTWTIMM 613
Query: 120 -----------VIGALVNCQR---MDLAESYFKEMGARDVASWTIMVNGLV----REGRI 161
V+ L C + L + + + R++ T + N L+ + G +
Sbjct: 614 KEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCV 673
Query: 162 VEARKLFD-KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLING 216
A +FD + KD +WN +I G+ +G A +LF +M + D + +++
Sbjct: 674 NRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSA 733
Query: 217 LVNSRRIDAAISYFKQ-------MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
+ +D YF MP+ + + +I +L R GL+KEA ++ P+
Sbjct: 734 CTHMGFVDEGRRYFSNMERDYGIMPQI--EHYGCMIDLLGRGGLIKEAVDLIKSMPW 788
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 187/550 (34%), Positives = 282/550 (51%), Gaps = 37/550 (6%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
A+++FD + ++ WNSM GY + E + +F M D+ NC
Sbjct: 89 ARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRP---------NCFTF 139
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL---FDKMPAKDVQAWNLMIAGYL 187
+ K G +N L+ EG V + F P ++ AG
Sbjct: 140 PVV---LKSCGK---------INALI-EGEQVHCFLIKCGFRGNPFVGTTLIDMYSAG-- 184
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
G VG A +F +M +R++ +W +ING + S + +A F PE WN ++S
Sbjct: 185 --GTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSG 242
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
I G + EA + P ++ W V+ GY G V + +FE M R++ WN +I
Sbjct: 243 YIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALI 302
Query: 308 FGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
G N L E L F +M ES P++AT +VL+ C+ L LDLG+ +H A
Sbjct: 303 GGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGL 362
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
V NA++ MYA+CG I++A+ F + D+ISWN++I GLA H AL LF +
Sbjct: 363 KGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQ 422
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
M+ KPD ITF+G+L AC++ GLV+ G YF M + Y + P+ HY C+VD+L R G
Sbjct: 423 MKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAG 482
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
+++AM +R +E +W LLGACRI+ N+++ E+A +R++ELEP N Y++
Sbjct: 483 RLEQAMAF---VRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVM 539
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHR---- 602
L+ +Y GR ED R+ M++ G KK PGCS I++ND F S D HP+
Sbjct: 540 LSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGV 599
Query: 603 LRYLLNLLHT 612
LR L+ +L +
Sbjct: 600 LRGLVKVLRS 609
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 208/460 (45%), Gaps = 39/460 (8%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTV-- 58
R+ A+ LFD++P + WN M RGY ++ + LF QM D+ FT+ V
Sbjct: 85 RMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLK 144
Query: 59 ----IAGLMQSDNVQG--AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
I L++ + V K F G + ++I Y G + +A ++F M +
Sbjct: 145 SCGKINALIEGEQVHCFLIKCGFRG----NPFVGTTLIDMYSAGGTVGDAYKIFCEMFER 200
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
+VV+W +I + + A F RDV W IMV+G + G +VEARKLF +MP
Sbjct: 201 NVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMP 260
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+DV WN ++ GY NG V E LF++M +R++ SW LI G ++ + FK+
Sbjct: 261 NRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKR 320
Query: 233 MPETCEKTWN-----SIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVG------ 278
M + N +++S R G L K H Y E NV VG
Sbjct: 321 MLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKG-----NVYVGNALMDM 375
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G + +AI VF M T+D+ WN +I GL + G + L F QMK +G PD TF
Sbjct: 376 YAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITF 435
Query: 339 TSVLTICSDLPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+L C+ + ++ G + A M+ M AR G ++ A+ +P
Sbjct: 436 IGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMP 495
Query: 398 IH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+ D + W ++ A Y L RL + +P +
Sbjct: 496 VEADGVIWAGLLG--ACRIYKNVELAELALQRLIELEPKN 533
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 127/266 (47%), Gaps = 30/266 (11%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
+A + A+ LFD P+RD V WN+M+ GY + G + A LF++MP RD+ +NTV+ G
Sbjct: 215 SADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGY 274
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN--LV 120
+ NV+ + +F+ M R++ +WN++I GY NGL E L F M + V N +
Sbjct: 275 ATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATL 334
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ L C R +GA D+ W + E+ L +V N
Sbjct: 335 VTVLSACAR----------LGALDLGKWVHVY---------AESSGL-----KGNVYVGN 370
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK- 239
++ Y G + A +F+ M +DL SW LI GL R A++ F QM +K
Sbjct: 371 ALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKP 430
Query: 240 ---TWNSIISVLIRNGLVKEAHSYLE 262
T+ I+ GLV++ +Y +
Sbjct: 431 DGITFIGILCACTHMGLVEDGFAYFQ 456
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 19/239 (7%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMYARCGNIQSALLEFS 394
F S+L C +Q+H +I N F ++ ++T+ A + A F
Sbjct: 41 FISLLQSCKT------SKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFD 94
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+P +I WNS+ G A + + LF +M+ D +P+ TF VL +C + +
Sbjct: 95 QIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIE 154
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
G C K + T ++D+ G + +A + E+ E + W +++
Sbjct: 155 GE-QVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEM----FERNVVAWTSMI 209
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGV-YLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ ++ ++ R+ +L P V + I+ Y+ G +A+++F +M V
Sbjct: 210 NGYILSADL----VSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDV 264
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 198/630 (31%), Positives = 326/630 (51%), Gaps = 66/630 (10%)
Query: 5 RIQEAQNLFDK-MPQRDTVTWNVMIRGYFKN-------------------GFLDNAMCLF 44
++Q +NL + QRD +T + YFK+ G L NA F
Sbjct: 8 QLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSF 67
Query: 45 NQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALR 104
+ ++F+YNT+I + + A++VFD + D+V++N++I+ Y G ALR
Sbjct: 68 DLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALR 127
Query: 105 VFHGM-PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVE 163
+F + L+ + + G ++ C DV GLVR+
Sbjct: 128 LFAEVRELRFGLDGFTLSGVIIAC--------------GDDV--------GLVRQLHCFV 165
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD---RDLTSWKQLINGLVNS 220
+D + + N ++A Y G + A +F++M + RD SW +I
Sbjct: 166 VVCGYDCYASVN----NAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQH 221
Query: 221 RRIDAAISYFKQMPETCEKT-WNSIISVLIRNGLVKEA------HSYLEKYPYSNIASWT 273
R A+ F++M K ++ SVL VK+ H + K + +
Sbjct: 222 REGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVG 281
Query: 274 NVIVGYFE--MGEVGSAIKVFELMTTRDVTVWNVMIFGLGE-NDLGEEGLKFFVQMKESG 330
+ ++ + G + KVFE + D+ +WN MI G + DL E+G+ F +M+ +G
Sbjct: 282 SGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNG 341
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMITMYARCGNIQS 388
PD+ +F V + CS+L + +G+Q+HA AIK I N+ +V+NA++ MY++CGN+
Sbjct: 342 FHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNR-VSVNNALVAMYSKCGNVHD 400
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F ++P H+++S NS+I G A HG ++L LFE M D P+ ITF+ VLSAC +
Sbjct: 401 ARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVH 460
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
G V++G+ YF+ MK ++ ++P + HY+C++DLLGR G + EA ++ + + +
Sbjct: 461 TGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIE-- 518
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
W LLGACR H N+++ A ++LEP N+ Y++L+ MY S R E+A + M+
Sbjct: 519 -WATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMR 577
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
E GVKK+PGCSWI+I+ HVF++ D+SHP
Sbjct: 578 ERGVKKKPGCSWIEIDKKVHVFVAEDTSHP 607
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 200/458 (43%), Gaps = 44/458 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNT 57
+++ I A+ +FD++PQ D V++N +I Y G A+ LF ++ E D FT +
Sbjct: 87 KHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSG 146
Query: 58 VIAGLMQSDNVQGAKE-----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL- 111
VI + D+V ++ V G + V N++++ Y G ++EA RVF M
Sbjct: 147 VI--IACGDDVGLVRQLHCFVVVCGYDCYASVN-NAVLACYSRKGFLNEARRVFREMGEG 203
Query: 112 --KDVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEAR 165
+D VSWN +I A + A F+EM R D+ + ++ +V
Sbjct: 204 GGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGM 263
Query: 166 KLFDKMPAKDVQAWNLMIAGYLD--NGCVG---VAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ M + + +G +D + C G +F+++ DL W +I+G
Sbjct: 264 QFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQY 323
Query: 221 RRI-DAAISYFKQM------PETCEKTW-NSIISVLIRNGLVKEAHSYLEK--YPYSNIA 270
+ + I F++M P+ C S S L + K+ H+ K PY+ ++
Sbjct: 324 EDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVS 383
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
++ Y + G V A +VF+ M ++ N MI G ++ + E L+ F M +
Sbjct: 384 VNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKD 443
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA-----MITMYARCGN 385
+P+ TF +VL+ C ++ G++ + + +F A MI + R G
Sbjct: 444 IAPNTITFIAVLSACVHTGKVEEGQKY----FNMMKERFRIEPEAEHYSCMIDLLGRAGK 499
Query: 386 IQSALLEFSSVPIHD-IISWNSIICGLAYHGYAEKALE 422
++ A ++P + I W +++ HG E A++
Sbjct: 500 LKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVK 537
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 196/633 (30%), Positives = 323/633 (51%), Gaps = 35/633 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------ERDMFTYNTVI 59
++ A+ +FDKMP D V+W +I+ Y D A+ LF+ M D + V+
Sbjct: 56 LRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 60 AGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
QS N+ E V+ V +S++ Y G ID++ RVF MP ++
Sbjct: 116 KACGQSSNI-AYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNA 174
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGL-----VREGRIVEAR 165
V+W +I LV+ R +YF EM D ++ I + V+ G+ +
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTH 234
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN-SRRID 224
+ A N + Y + G + LF+ M +RD+ SW LI + +
Sbjct: 235 VIVRGFVTTLCVA-NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 225 AAISYFK----QMPETCEKTWNSIISV---LIRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
A ++ K Q+P E+T+ S+ S L R ++ H + ++ S +N ++
Sbjct: 294 AVETFIKMRNSQVPPN-EQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMM 352
Query: 278 G-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y G + SA +F+ M RD+ W+ +I G + GEEG K+F M++SG P +
Sbjct: 353 KMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDF 412
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
S+L++ ++ ++ GRQ+HA A+ Q +TV +++I MY++CG+I+ A + F
Sbjct: 413 ALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGET 472
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
DI+S ++I G A HG +++A++LFE+ F+PD +TF+ VL+AC+++G +D G
Sbjct: 473 DRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGF 532
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
+YF+ M+ Y ++P HY C+VDLL R G + +A ++NE+ +V VW LL A
Sbjct: 533 HYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDV---VWTTLLIA 589
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
C+ +I+ G A ER++EL+P + + L +Y S G E+A + MK GV KEP
Sbjct: 590 CKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEP 649
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNL 609
G S I+I D F+SGD HP+ + +L L
Sbjct: 650 GWSSIKIKDCVSAFVSGDRFHPQSEDIYNILEL 682
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 180/434 (41%), Gaps = 85/434 (19%)
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRD----- 206
+ L+ G + AR++FDKMP D+ +W +I Y+ A LF M D
Sbjct: 47 LRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSP 106
Query: 207 --------LTSWKQLIN--------------GLVNS--------------RRIDAAISYF 230
L + Q N L++S +ID + F
Sbjct: 107 DTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVF 166
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS------------------- 271
+MP TW +II+ L+ G KE +Y + S S
Sbjct: 167 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVK 226
Query: 272 -----WTNVIVG---------------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
T+VIV Y E GE+ + +FE M+ RDV W +I +
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI--VA 284
Query: 312 ENDLGEE--GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
+G+E ++ F++M+ S P+ TF S+ + C+ L L G Q+H + + N
Sbjct: 285 YKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDS 344
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
+VSN+M+ MY+ CGN+ SA + F + DIISW++II G G+ E+ + F MR
Sbjct: 345 LSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQ 404
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+ KP D +LS +++ GR + + L+ S + ++++ + G I
Sbjct: 405 SGTKPTDFALASLLSVSGNMAVIEGGR-QVHALALCFGLEQNSTVRSSLINMYSKCGSIK 463
Query: 490 EAMNLLNEIRADGI 503
EA + E D I
Sbjct: 464 EASMIFGETDRDDI 477
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 133/286 (46%), Gaps = 26/286 (9%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------ 233
N + ++ G + A +F KM D+ SW +I V + D A+ F M
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 234 --PETCEKTWNSIISVLIRN-------GLVKEAHSYLEKYP-YSNIASWTNVIVGYFEMG 283
P+T S++SV+++ + H+Y K S++ ++++ Y +G
Sbjct: 104 VSPDT------SVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVG 157
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
++ + +VF M R+ W +I GL +EGL +F +M S D TF L
Sbjct: 158 KIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALK 217
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTT--VSNAMITMYARCGNIQSALLEFSSVPIHDI 401
C+ L + G+ IH I R TT V+N++ TMY CG +Q L F ++ D+
Sbjct: 218 ACAGLRQVKYGKAIHTHV--IVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
+SW S+I G KA+E F +MR + P++ TF + SAC+
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 131/573 (22%), Positives = 233/573 (40%), Gaps = 74/573 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNT 57
R +I ++ +F +MP R+ VTW +I G G + F++M D +T+
Sbjct: 155 RVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAI 214
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTW----NSMISGYVCNGLIDEALRVFHGMPLKD 113
+ V+ K + + VR VT NS+ + Y G + + L +F M +D
Sbjct: 215 ALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERD 274
Query: 114 VVSWNLVIGALVNC-QRMDLAESYFKEMGAR---DVASWTIMVNGLVREGRIVEARKLFD 169
VVSW +I A Q + E++ K ++ + ++ M + R+V +L
Sbjct: 275 VVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHC 334
Query: 170 KMPA----KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
+ + + N M+ Y G + A LFQ M RD+ SW +I G + +
Sbjct: 335 NVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEE 394
Query: 226 AISYFKQMPETCEKTWN----SIISV-----LIRNGLVKEAHSYLEKYPY-SNIASWTNV 275
YF M ++ K + S++SV +I G ++ H+ + N +++
Sbjct: 395 GFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGG--RQVHALALCFGLEQNSTVRSSL 452
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
I Y + G + A +F D+ MI G E+ +E + F + + G PD+
Sbjct: 453 INMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDS 512
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
TF SVLT C+ LDLG N M Y N++ A +
Sbjct: 513 VTFISVLTACTHSGQLDLGFHYF---------------NMMQETY----NMRPAKEHYGC 553
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+ ++C AEK + +K DD+ + +L AC G +++G
Sbjct: 554 MV--------DLLCRAGRLSDAEKMINEM------SWKKDDVVWTTLLIACKAKGDIERG 599
Query: 456 RYYFDCMKNKYFLQPRSA-HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
R + + L P A + ++ G ++EA N+ ++A G+ P W ++
Sbjct: 600 RRAAERILE---LDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPG-WSSI- 654
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLIL 547
+I + + ++G+R P + +Y IL
Sbjct: 655 ---KIKDCVS-AFVSGDR---FHPQSEDIYNIL 680
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 190/641 (29%), Positives = 319/641 (49%), Gaps = 74/641 (11%)
Query: 6 IQEAQNLFDKM-PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP---------------- 48
+ +A+ +F++ +R+ V+WN ++ Y KN +A+ +F +M
Sbjct: 151 MDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 210
Query: 49 -----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVT 85
++D+FT N ++ M+ V A +F+ M DVV+
Sbjct: 211 ACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVS 270
Query: 86 WNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
WN++ISG V NG A+ + M + +V + + ++ A DL M
Sbjct: 271 WNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMI 330
Query: 142 ARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+ S + GLV + + +ARK+FD M +D+ N +I+G G A
Sbjct: 331 KANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALS 390
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
LF ++ L + + ++ S A S +Q + ++ ++ G + +A
Sbjct: 391 LFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQ-----------VHALAVKIGFIFDA 439
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
H +I Y++ + A +VFE ++ D+ MI L + D GE
Sbjct: 440 HVV------------NGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGE 487
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
+K F++M G PD +S+L C+ L + G+Q+HA IK NA++
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 547
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
YA+CG+I+ A L FSS+P ++SW+++I GLA HG+ ++ALELF RM P+ I
Sbjct: 548 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 607
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
T VL AC++AGLVD+ + YF+ MK + + HY+C++DLLGR G +D+AM L+N
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 667
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
+ + + ++WGALLGA R+H + ++G++A E++ LEP SG +++L Y S G
Sbjct: 668 MP---FQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMW 724
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+ ++ MK++ +KKEP SWI++ D H F+ GD SHP
Sbjct: 725 NEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHP 765
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 157/595 (26%), Positives = 262/595 (44%), Gaps = 50/595 (8%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ--SD 66
A+ FD++P V+W+ ++ Y NG +A+ F+ M + + +++ D
Sbjct: 56 ARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD 115
Query: 67 NVQGAKEVFDGMEV---RDVVTWNSMISGYVCNGLIDEALRVFH-GMPLKDVVSWNLVIG 122
GA+ M DV N++++ Y G +D+A RVF+ ++ VSWN ++
Sbjct: 116 ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMS 175
Query: 123 ALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGL-----VREGRIVEA---RKLFDK 170
A V + A F EM + ++ +VN + GR V A R +D
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD- 234
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
KDV N ++ Y+ G V +A +F+KM D D+ SW LI+G V + AI
Sbjct: 235 ---KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELL 291
Query: 231 KQMPETCEK----TWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVGYFEMG 283
QM + T +SI+ G L ++ H ++ K +N S + VG +M
Sbjct: 292 LQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIK---ANADSDDYIGVGLVDMY 348
Query: 284 E----VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ A KVF+ M RD+ + N +I G +E L F ++++ G + T
Sbjct: 349 AKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLA 408
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
+VL + L RQ+HA A+KI V N +I Y +C + A F
Sbjct: 409 AVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSG 468
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
DII+ S+I L+ + E A++LF M +PD +L+AC+ +QG+
Sbjct: 469 DIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVH 528
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
+ + F+ A +V + G I++A + + G+ W A++G
Sbjct: 529 AHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLPERGV----VSWSAMIGGLAQ 583
Query: 520 HNNIKVG-EIAGERVME-LEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKE 569
H + K E+ G V E + PN ++ +T + +C G ++AKR F MKE
Sbjct: 584 HGHGKRALELFGRMVDEGINPN----HITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 116/531 (21%), Positives = 224/531 (42%), Gaps = 27/531 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ R+ A +F+KMP D V+WN +I G NG A+ L QM + ++
Sbjct: 248 MKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLS 307
Query: 61 GLMQSDNVQGAKEV---FDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++++ + GA ++ G ++ D ++ Y N +D+A +VF M +
Sbjct: 308 SILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR 367
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
D++ N +I + R D A S F E+ + + +++ +EA ++
Sbjct: 368 DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVH 427
Query: 173 AK--------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
A D N +I Y C+ A +F++ D+ + +I L +
Sbjct: 428 ALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGE 487
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLV-------KEAHSYLEKYPYSNIASWTNVIV 277
AI F +M + ++S L+ K+ H++L K + + A N +V
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 547
Query: 278 -GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A F + R V W+ MI GL ++ G+ L+ F +M + G +P++
Sbjct: 548 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 607
Query: 337 TFTSVLTICSDLPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
T TSVL C+ +D R ++ ++ + MI + R G + A+ +S
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 667
Query: 396 VPIHDIIS-WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+P S W +++ H E E++ + + + T V + + + AG+ ++
Sbjct: 668 MPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSG-THVLLANTYASAGMWNE 726
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
MK+ + + + V D + F + D++ + EI A +E+
Sbjct: 727 VAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVEL 777
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 104/270 (38%), Gaps = 41/270 (15%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T + LT + L G +HA +K + N +I+ Y++C A F +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLK--SGSLASFRNHLISFYSKCRRPCCARRFFDEI 63
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
P +SW+S++ + +G A++ F MR ++ VL A L Q
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQ-- 121
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA---------------- 500
+ M + A +V + G FG +D+A + NE +
Sbjct: 122 VHAMAMATGFGSDVFVA--NALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVK 179
Query: 501 -----DGIEV---------SPTVWG--ALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
D I+V PT +G ++ AC NI+ G V+ + + V+
Sbjct: 180 NDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKD-VF 238
Query: 545 L--ILTEMYLSCGRREDAKRIFAQMKENGV 572
L +MY+ GR + A IF +M ++ V
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDV 268
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 185/662 (27%), Positives = 321/662 (48%), Gaps = 84/662 (12%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTY-------- 55
+ + +FDK+ WN+++ Y K G ++ LF +M + + +T+
Sbjct: 147 QGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFA 206
Query: 56 ---------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
N++IA + V+ A +FD + DVV+WNS
Sbjct: 207 ALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNS 266
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQR---MDLAESY----FKEM 140
MI+G V NG L +F M + V V ++ LV C + L + K
Sbjct: 267 MINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKAC 326
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
+ +V +++ + G + A ++F KM + +W +IA Y+ G A LF
Sbjct: 327 FSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFD 386
Query: 201 KMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
+M + D+ + +++ S +D ++
Sbjct: 387 EMQSKGVRPDIYTVTSIVHACACSSSLDKG----------------------------RD 418
Query: 257 AHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
HSY+ K + TN ++ Y + G V A VF + +D+ WN MI G +N L
Sbjct: 419 VHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLL 478
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
E L+ F+ M++ PD+ T VL C+ L LD GR+IH ++ V+ A
Sbjct: 479 PNEALELFLDMQKQF-KPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACA 537
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
++ MYA+CG + A L F +P D+ISW +I G HG+ +A+ F MR+ +PD
Sbjct: 538 LVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPD 597
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
+ +F +L+ACS++GL+++G +F+ M+N+ ++P+ HY CVVDLL R G + +A +
Sbjct: 598 ESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFI 657
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
+ I+ T+WG LL CRIH+++K+ E E + ELEP+N+ Y++L +Y
Sbjct: 658 ESMP---IKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAE 714
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+ E+ K++ +M++ G K+ PGCSWI++ ++F++G+S HP+ ++ LL+ L +++
Sbjct: 715 KWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQ 774
Query: 616 RE 617
E
Sbjct: 775 NE 776
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 147/561 (26%), Positives = 250/561 (44%), Gaps = 61/561 (10%)
Query: 13 FDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDMFTYNTVIAGLMQSDNVQG 70
F T N I + + G L NA+ L + E + +Y +V+ + +++
Sbjct: 53 FTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLED 112
Query: 71 AKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
K V +G+ V D ++ YV G + + ++F + V WNL++
Sbjct: 113 GKRVHSVIISNGISV-DEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYA 171
Query: 126 NCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVEARKLFDKMP----AKDVQ 177
+ S FK+M V ++T ++ G++ E +++ + +
Sbjct: 172 KIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTA 231
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PET 236
N +IA Y G V A +LF ++ + D+ SW +ING V + + F QM
Sbjct: 232 VVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILG 291
Query: 237 CEKTWNSIISVLIRNG------LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAI 289
E +++SVL+ L + H + K +S ++N ++ Y + G + A
Sbjct: 292 VEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGAT 351
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
+VF M + W +I L + + F +M+ G PD T TS++ C+
Sbjct: 352 EVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 411
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
+LD GR +H+ IK V+NA+I MYA+CG+++ A L FS +P+ DI+SWN++I
Sbjct: 412 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 471
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-YYFDCMKNKYFL 468
G + + +ALELF M+ FKPDDIT VL AC+ +D+GR + ++ YF
Sbjct: 472 GYSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF- 529
Query: 469 QPRSAHYTC-VVDLLGRFGLI-------------------------------DEAMNLLN 496
H C +VD+ + GL+ +EA++ N
Sbjct: 530 --SDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFN 587
Query: 497 EIRADGIEVSPTVWGALLGAC 517
E+R GIE + + A+L AC
Sbjct: 588 EMRIAGIEPDESSFSAILNAC 608
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 204/513 (39%), Gaps = 125/513 (24%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTY------ 55
++ A NLFD++ + D V+WN MI G NGF N + +F QM E D+ T
Sbjct: 246 VESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVA 305
Query: 56 -----------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
NT++ + N+ GA EVF M +V+W
Sbjct: 306 CANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSW 365
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
S+I+ YV GL +A+ +F M K D+ + ++ A +D
Sbjct: 366 TSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLD---------KG 416
Query: 143 RDVASWTI-------------MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
RDV S+ I ++N + G + EAR +F K+P KD+ +WN MI GY N
Sbjct: 417 RDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQN 476
Query: 190 GCVGVAEDLFQKMHDR----DLTSWKQL-----INGLVNSRRIDAAI---SYFKQMPETC 237
A +LF M + D+T L + L R I I YF + C
Sbjct: 477 LLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVAC 536
Query: 238 EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
+++ + + GL+ A + P ++ SWT
Sbjct: 537 -----ALVDMYAKCGLLVLAQLLFDMIPKKDLISWT------------------------ 567
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
VMI G G + G E + F +M+ +G PD ++F+++L CS L+ G +
Sbjct: 568 -------VMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKF 620
Query: 358 HAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGL 411
RN+ ++ + AR GN+ A S+PI D W ++ G
Sbjct: 621 ----FNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGC 676
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
H + A ++ E + + +PD+ + VL+
Sbjct: 677 RIHHDVKLAEKVAE--HIFELEPDNTRYYVVLA 707
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 110/283 (38%), Gaps = 46/283 (16%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
++ SVL +C++ +L+ G+++H+ I + + ++ MY CG++ F +
Sbjct: 96 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI 155
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+ WN ++ A G +++ LF++M+ + TF VL + G V + +
Sbjct: 156 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 215
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLL----GRFGLIDEAMNLLNEIRAD----------- 501
+ Y L+ T VV+ L +FG ++ A NL +E+
Sbjct: 216 RV-----HGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 270
Query: 502 --------------------GIEVSPTVWGALLGACRIHNNIKVGE-IAGERVMELEPNN 540
G+EV T ++L AC N+ +G + G V
Sbjct: 271 CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEE 330
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQI 583
L +MY CG A +F +M + + SW I
Sbjct: 331 VVFSNTLLDMYSKCGNLNGATEVFVKMGDTTI-----VSWTSI 368
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 197/693 (28%), Positives = 330/693 (47%), Gaps = 104/693 (15%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN-----------------GFLDNAMCLF 44
R + A++L MP+R+ V+WN +I ++ G L L
Sbjct: 86 RAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLA 145
Query: 45 NQMP-----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
+ + + + F N ++ + +V A +F GM
Sbjct: 146 SVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARP 205
Query: 82 DVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVN---------- 126
+ V++ +M+ G G ID+ALR+F G+P+ D VS + V+GA
Sbjct: 206 NEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPV-DPVSVSSVLGACAQACATDYSVAR 264
Query: 127 ---------------------------------CQRMDLAESYFKEMGARDVASWTIMVN 153
C MD A F+ + + + SW I++
Sbjct: 265 AFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILIT 324
Query: 154 GLVREGRIVEARKLFDKMPAKDVQ----AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
G +EG +A ++ M + ++ ++A + V A +F K+ +T+
Sbjct: 325 GFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTT 384
Query: 210 WKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIRNGLV---KEAHSYLE 262
W L++G + I F++M + T I+S + G++ ++ HS
Sbjct: 385 WNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASV 444
Query: 263 KYPYSN-IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
++ N + + ++ Y + G++G A +F MT RDV WN +I GL + L +E
Sbjct: 445 RFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFD 504
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
FF QM+E+G P +++ S++ CS L ++ GRQIHAQ +K +Q V +A+I MYA
Sbjct: 505 FFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYA 564
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CGN+ A L F ++ + +I++WN +I G A +G +KA+ELFE M T+ KPD +TF+
Sbjct: 565 KCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIA 624
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
VL+ CS++GLVD+ +F+ M+N Y + P + HYTC++D LGR G E L++++
Sbjct: 625 VLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPC- 683
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
+ P +W LL AC +H+N ++G+ A E + ++P N Y++L+ +Y S GR DA
Sbjct: 684 --KDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDAS 741
Query: 562 RIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
+ A M GV K G SWI DG F+ D
Sbjct: 742 AVRALMSNRGVVKGRGYSWIDQKDGVRAFMVAD 774
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/513 (25%), Positives = 235/513 (45%), Gaps = 40/513 (7%)
Query: 13 FDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQG-A 71
F +P + ++N + + G LD A L MP R+ ++NTVI+ L +S G A
Sbjct: 66 FRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEA 125
Query: 72 KEVFDGMEVRDVV----TWNSMISGYVCNGLIDEAL---RVFHGMPLK-----DVVSWNL 119
E++ M ++ T S++S C GL AL R HG+ +K + N
Sbjct: 126 VEMYGRMRAEGLLPTHFTLASVLS--ACGGL--AALGDGRRCHGVAVKVGLDANQFVENA 181
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++G C + A F M + S+T M+ GL + G I +A +LF +M V
Sbjct: 182 LLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVD 241
Query: 180 NLMIAGYLDNGCVGVAED--------LFQKMH--------DRDLTSWKQLINGLVNSRRI 223
+ ++ L A D L Q +H D LI+ +
Sbjct: 242 PVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEM 301
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL----EKYPYSNIASWTNVIVGY 279
D A+ F+ +P +WN +I+ + G +A L E N +++N++
Sbjct: 302 DEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASC 361
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ +V SA +F+ ++ VT WN ++ G + + ++ ++ F +M+ PD T
Sbjct: 362 IKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLA 421
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
+L+ CS L LD GRQ+H+ +++ + V++ ++ MY++CG I A F+ +
Sbjct: 422 VILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTER 481
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY-Y 458
D++ WNSII GL H ++A + F++MR P + ++ ++++CS + GR +
Sbjct: 482 DVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIH 541
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
MK+ Y + ++D+ + G +D+A
Sbjct: 542 AQVMKDGYDQNVYVG--SALIDMYAKCGNMDDA 572
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 1/213 (0%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N ++ + R GL + A P N S+ + G++ +A + M R+
Sbjct: 47 NRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAV 106
Query: 302 VWNVMIFGLGENDL-GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
WN +I L + G E ++ + +M+ G P + T SVL+ C L L GR+ H
Sbjct: 107 SWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGV 166
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
A+K+ + V NA++ MY +CG++ A+ F + + +S+ +++ GLA G + A
Sbjct: 167 AVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDA 226
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
L LF RM + D ++ VL AC+ A D
Sbjct: 227 LRLFARMCRSGVPVDPVSVSSVLGACAQACATD 259
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 201/632 (31%), Positives = 322/632 (50%), Gaps = 70/632 (11%)
Query: 5 RIQEAQNLFDK-MPQRDTVTWNVMIRGYFKN-------------------GFLDNAMCLF 44
++Q +NL + QRD +T ++ YFK+ G L NA F
Sbjct: 8 QLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSF 67
Query: 45 NQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALR 104
+ ++F+YNT+I + + A+ VFD + D+V++N++I+ Y G LR
Sbjct: 68 HLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLR 127
Query: 105 VFHGM-PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVE 163
+F + L+ + + G + C DV GLVR+
Sbjct: 128 LFEEVRELRLGLDGFTLSGVITAC--------------GDDV--------GLVRQ----- 160
Query: 164 ARKLFDKMPAKDVQAW--NLMIAGYLDNGCVGVAEDLFQKMHD---RDLTSWKQLINGLV 218
F + D A N ++A Y G + A +F++M + RD SW +I
Sbjct: 161 -LHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACG 219
Query: 219 NSRRIDAAISYFKQMPETCEKT-WNSIISVLIRNGLVKEA------HSYLEKYPYSNIAS 271
R A+ F++M K ++ SVL VK+ H + K + +
Sbjct: 220 QHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSH 279
Query: 272 WTNVIVGYFE--MGEVGSAIKVFELMTTRDVTVWNVMIFGLG-ENDLGEEGLKFFVQMKE 328
+ ++ + G + KVFE +T D+ +WN MI G DL E+GL F +M+
Sbjct: 280 VGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQR 339
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMITMYARCGNI 386
+G PD+ +F V + CS+L + LG+Q+HA AIK + N+ +V+NA++ MY++CGN+
Sbjct: 340 NGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNR-VSVNNALVAMYSKCGNV 398
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
A F ++P H+ +S NS+I G A HG ++L LFE M D P+ ITF+ VLSAC
Sbjct: 399 HDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSAC 458
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
+ G V++G+ YF+ MK ++ ++P + HY+C++DLLGR G + EA ++ + + +
Sbjct: 459 VHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIE 518
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
W LLGACR H N+++ A + LEP N+ Y++L+ MY S R E+A +
Sbjct: 519 ---WATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRL 575
Query: 567 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
M+E GVKK+PGCSWI+I+ HVF++ D+SHP
Sbjct: 576 MRERGVKKKPGCSWIEIDKKVHVFVAEDTSHP 607
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 202/473 (42%), Gaps = 47/473 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNT 57
+++ I A+ +FD++PQ D V++N +I Y G + LF ++ E D FT +
Sbjct: 87 KHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSG 146
Query: 58 VIAGLMQSDNVQGAKE-----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL- 111
VI D+V ++ V G + V N++++ Y G + EA RVF M
Sbjct: 147 VITAC--GDDVGLVRQLHCFVVVCGHDCYASVN-NAVLACYSRKGFLSEARRVFREMGEG 203
Query: 112 --KDVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEAR 165
+D VSWN +I A + A F+EM R D+ + ++ +V R
Sbjct: 204 GGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGR 263
Query: 166 KLFDKMPAKDVQAWNLMIAGYLD--NGCVGV---AEDLFQKMHDRDLTSWKQLINGLVNS 220
+ M + + +G +D + C G +F+++ DL W +I+G
Sbjct: 264 QFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLY 323
Query: 221 RRI-DAAISYFKQM------PETCEKTW-NSIISVLIRNGLVKEAHSYLEK--YPYSNIA 270
+ + + F++M P+ C S S L L K+ H+ K PY+ ++
Sbjct: 324 EDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVS 383
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
++ Y + G V A +VF+ M + N MI G ++ + E L+ F M E
Sbjct: 384 VNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKD 443
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA-----MITMYARCGN 385
+P++ TF +VL+ C ++ G++ + + +F A MI + R G
Sbjct: 444 IAPNSITFIAVLSACVHTGKVEEGQKY----FNMMKERFCIEPEAEHYSCMIDLLGRAGK 499
Query: 386 IQSALLEFSSVPIHD-IISWNSIICGLAYHGYAE---KALELFERMRLTDFKP 434
++ A ++P + I W +++ HG E KA F R+ + P
Sbjct: 500 LKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAP 552
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 254/444 (57%), Gaps = 4/444 (0%)
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
A+D N +I Y N + A+ +F +M RD+ SW + +V +DAA S F +
Sbjct: 161 AEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDE 220
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
MPE +WN+++ + G ++A ++ P N+ SW+ V+ Y + G++ A +F
Sbjct: 221 MPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIF 280
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ M +++ W +M+ + L EE + F +M ++ D S+L C++ +L
Sbjct: 281 DKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLA 340
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGL 411
LG++IH + ++ T V NA++ M+ +CG + A F + + D++SWN II G
Sbjct: 341 LGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGF 400
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
A HG EKALELF +M+ F PD +T + VLSAC++ GLV++GR +F M+ Y ++P+
Sbjct: 401 AMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQ 460
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
HY C+VDLLGR GLI EA++++ + + EV +WG+LL ACR+H N++ E+A
Sbjct: 461 IEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEV---IWGSLLSACRLHKNVEYAELAVN 517
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
+ L+P+++G Y +L+ +Y G+ D + QMK G +K G SWI++N+ H F
Sbjct: 518 ELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEFT 577
Query: 592 SGDSSHPKFHRLRYLLNLLHTEIE 615
GD HP+ ++ +++ L + ++
Sbjct: 578 VGDRKHPESDQISDMIDRLSSHVK 601
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 197/439 (44%), Gaps = 81/439 (18%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
DT N +I Y KN L +A +F++M RD+ ++NT +A +++ V A+ +FD M
Sbjct: 163 DTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMP 222
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKE 139
+D V+WN+M+ GY G ++A +F MP ++VVSW+ V+ A M++A F +
Sbjct: 223 EKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDK 282
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK----DVQAWNLMIAGYLDNGCVGVA 195
M A+++ +WTIMV+ ++G + EA +LF +M DV A ++A ++G + +
Sbjct: 283 MPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALG 342
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
+ + + + R L+ + N L++ + + G V
Sbjct: 343 KRIHRHVRQRKLSRSTLVCNALMD---------------------------MFCKCGCVN 375
Query: 256 EA-HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
A + + + ++ SW N+I+G F M +
Sbjct: 376 RADYIFDTEIVEKDLVSW-NIIIGGFAM------------------------------HG 404
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ-----AIKIARNQF 369
GE+ L+ F QMK+ G PD T +VL+ C+ + ++ GR+ A IK +
Sbjct: 405 PGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHY 464
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHG---YAEKALELFE 425
M+ + R G I+ A+ +P + + W S++ H YAE A+
Sbjct: 465 ----GCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAELAVN--- 517
Query: 426 RMRLTDFKPDDITFVGVLS 444
L++ +P VLS
Sbjct: 518 --ELSNLQPSSAGNYAVLS 534
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 153/286 (53%), Gaps = 22/286 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + A+++FD+MP++DTV+WN M+ GY K G + A LF +MP R++ +++TV++
Sbjct: 206 VRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVS 265
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVS 116
+ +++ A+ +FD M +++VTW M+S GL++EA R+F M DV++
Sbjct: 266 AYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIA 325
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFD-KM 171
++ A + L + + + R ++ T++ N L+ + G + A +FD ++
Sbjct: 326 VVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEI 385
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAI 227
KD+ +WN++I G+ +G A +LF +M + D + +++ + ++
Sbjct: 386 VEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGR 445
Query: 228 SYFKQM-------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
+F M P+ + + ++ +L R GL+KEA +++ P+
Sbjct: 446 RFFANMETDYGIKPQI--EHYGCMVDLLGRGGLIKEAVDMIKRMPW 489
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 136/273 (49%), Gaps = 13/273 (4%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N + +A+ +FD+M RD V+WN + + G +D A +F++MPE+D ++NT++ G
Sbjct: 176 KNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSWNTMLDG 235
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
++ + A E+F M R+VV+W++++S Y G ++ A +F MP K++V+W +++
Sbjct: 236 YAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMV 295
Query: 122 GALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
A ++ A F EM DV + ++ G + +++ + + +
Sbjct: 296 SACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQRKLS 355
Query: 178 AWNLMIAGYLDN----GCVGVAEDLFQ-KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
L+ +D GCV A+ +F ++ ++DL SW +I G + A+ F Q
Sbjct: 356 RSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFAQ 415
Query: 233 MPETC----EKTWNSIISVLIRNGLVKEAHSYL 261
M + T +++S GLV+E +
Sbjct: 416 MKQQGFHPDAVTLINVLSACTHMGLVEEGRRFF 448
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 113/285 (39%), Gaps = 46/285 (16%)
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFT-SVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
N L L F+ + P TFT S L L R HA +K+ + T
Sbjct: 110 NSLPHAALAVFLDV----PLRQRGTFTYSFLIKALAAAGLTPVRGAHAHVVKLGSAEDTF 165
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC---------------------- 409
V NA+I Y++ + A F + D++SWN+ +
Sbjct: 166 VGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEKD 225
Query: 410 ---------GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
G A G AEKA ELF+RM + +++ V+SA G ++ R FD
Sbjct: 226 TVSWNTMLDGYAKAGEAEKAFELFQRMPGRNV----VSWSTVVSAYCKKGDMEMARVIFD 281
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
M K + +T +V + GL++EA L E+ IE+ ++L AC
Sbjct: 282 KMPAKNLVT-----WTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAES 336
Query: 521 NNIKVGEIAGERVMELEPNNSGVYL-ILTEMYLSCGRREDAKRIF 564
++ +G+ V + + + S + L +M+ CG A IF
Sbjct: 337 GSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIF 381
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 190/641 (29%), Positives = 319/641 (49%), Gaps = 74/641 (11%)
Query: 6 IQEAQNLFDKM-PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP---------------- 48
+ +A+ +F++ +R+ V+WN ++ Y KN +A+ +F +M
Sbjct: 151 MDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 210
Query: 49 -----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVT 85
++D+FT N ++ M+ V A +F+ M DVV+
Sbjct: 211 ACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVS 270
Query: 86 WNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
WN++ISG V NG A+ + M + +V + + ++ A DL M
Sbjct: 271 WNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMI 330
Query: 142 ARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+ S + GLV + + +ARK+FD M +D+ N +I+G G A
Sbjct: 331 KANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALS 390
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
LF ++ L + + ++ S A S +Q + ++ ++ G + +A
Sbjct: 391 LFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQ-----------VHALAVKIGFIFDA 439
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
H +I Y++ + A +VFE ++ D+ MI L + D GE
Sbjct: 440 HVV------------NGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGE 487
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
+K F++M G PD +S+L C+ L + G+Q+HA IK NA++
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 547
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
YA+CG+I+ A L FSS+P ++SW+++I GLA HG+ ++ALELF RM P+ I
Sbjct: 548 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 607
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
T VL AC++AGLVD+ + YF+ MK + + HY+C++DLLGR G +D+AM L+N
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 667
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
+ + + ++WGALLGA R+H + ++G++A E++ LEP SG +++L Y S G
Sbjct: 668 MP---FQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMW 724
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+ ++ MK++ +KKEP SWI++ D H F+ GD SHP
Sbjct: 725 NEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHP 765
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 157/595 (26%), Positives = 263/595 (44%), Gaps = 50/595 (8%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ--SD 66
A+ +FD++P V+W+ ++ Y NG +A+ F+ M + + +++ D
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD 115
Query: 67 NVQGAKEVFDGMEV---RDVVTWNSMISGYVCNGLIDEALRVFH-GMPLKDVVSWNLVIG 122
GA+ M DV N++++ Y G +D+A RVF+ ++ VSWN ++
Sbjct: 116 ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMS 175
Query: 123 ALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGL-----VREGRIVEA---RKLFDK 170
A V + A F EM + ++ +VN + GR V A R +D
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD- 234
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
KDV N ++ Y+ G V +A +F+KM D D+ SW LI+G V + AI
Sbjct: 235 ---KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELL 291
Query: 231 KQMPETCEK----TWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVGYFEMG 283
QM + T +SI+ G L ++ H ++ K +N S + VG +M
Sbjct: 292 LQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIK---ANADSDDYIGVGLVDMY 348
Query: 284 E----VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ A KVF+ M RD+ + N +I G +E L F ++++ G + T
Sbjct: 349 AKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLA 408
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
+VL + L RQ+HA A+KI V N +I Y +C + A F
Sbjct: 409 AVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSG 468
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
DII+ S+I L+ + E A++LF M +PD +L+AC+ +QG+
Sbjct: 469 DIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVH 528
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
+ + F+ A +V + G I++A + + G+ W A++G
Sbjct: 529 AHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLPERGV----VSWSAMIGGLAQ 583
Query: 520 HNNIKVG-EIAGERVME-LEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKE 569
H + K E+ G V E + PN ++ +T + +C G ++AKR F MKE
Sbjct: 584 HGHGKRALELFGRMVDEGINPN----HITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 116/531 (21%), Positives = 224/531 (42%), Gaps = 27/531 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ R+ A +F+KMP D V+WN +I G NG A+ L QM + ++
Sbjct: 248 MKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLS 307
Query: 61 GLMQSDNVQGAKEV---FDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++++ + GA ++ G ++ D ++ Y N +D+A +VF M +
Sbjct: 308 SILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR 367
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
D++ N +I + R D A S F E+ + + +++ +EA ++
Sbjct: 368 DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVH 427
Query: 173 AK--------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
A D N +I Y C+ A +F++ D+ + +I L +
Sbjct: 428 ALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGE 487
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLV-------KEAHSYLEKYPYSNIASWTNVIV 277
AI F +M + ++S L+ K+ H++L K + + A N +V
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 547
Query: 278 -GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A F + R V W+ MI GL ++ G+ L+ F +M + G +P++
Sbjct: 548 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 607
Query: 337 TFTSVLTICSDLPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
T TSVL C+ +D R ++ ++ + MI + R G + A+ +S
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 667
Query: 396 VPIHDIIS-WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+P S W +++ H E E++ + + + T V + + + AG+ ++
Sbjct: 668 MPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSG-THVLLANTYASAGMWNE 726
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
MK+ + + + V D + F + D++ + EI A +E+
Sbjct: 727 VAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVEL 777
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 104/270 (38%), Gaps = 41/270 (15%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T + LT + L G +HA +K + N +I+ Y++C A F +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLK--SGSLASFRNHLISFYSKCRRPCCARRVFDEI 63
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
P +SW+S++ + +G A++ F MR ++ VL A L Q
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQ-- 121
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA---------------- 500
+ M + A +V + G FG +D+A + NE +
Sbjct: 122 VHAMAMATGFGSDVFVA--NALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVK 179
Query: 501 -----DGIEV---------SPTVWG--ALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
D I+V PT +G ++ AC NI+ G V+ + + V+
Sbjct: 180 NDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKD-VF 238
Query: 545 L--ILTEMYLSCGRREDAKRIFAQMKENGV 572
L +MY+ GR + A IF +M ++ V
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDV 268
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 196/649 (30%), Positives = 325/649 (50%), Gaps = 72/649 (11%)
Query: 13 FDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVI-------- 59
FD++PQ+D WN MI Y NG A+ F Q+ D +T+ V+
Sbjct: 174 FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD 233
Query: 60 --------------------AGLMQSDNVQG----AKEVFDGMEVRDVVTWNSMISGYVC 95
A L+ + G A+ +FD M RD+ +WN+MISG +
Sbjct: 234 GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 293
Query: 96 NGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMD------LAESYFKEMGAR-DVAS 147
NG +AL V M L+ + +++ V+ L C ++ L Y + G D+
Sbjct: 294 NGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFV 353
Query: 148 WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL 207
++N + G + +ARK F +M DV +WN +IA Y N A F KM
Sbjct: 354 SNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQ---- 409
Query: 208 TSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS 267
+NG +++ C+ + S+ ++R G + E
Sbjct: 410 ------LNGFQPDLLTLVSLASIVAQSRDCKNS-RSVHGFIMRRGWLME----------- 451
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
++ V+ Y ++G + SA KVFE++ +DV WN +I G +N L E ++ + M+
Sbjct: 452 DVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMME 511
Query: 328 ESGPS-PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
E P+ T+ S+L + + L G +IH + IK + V+ +I +Y +CG +
Sbjct: 512 ECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRL 571
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
A+ F VP ++WN+II HG+AEK L+LF M KPD +TFV +LSAC
Sbjct: 572 VDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSAC 631
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
S++G V++G++ F M+ +Y ++P HY C+VDLLGR G ++ A + + ++ ++
Sbjct: 632 SHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMP---LQPD 687
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
++WGALLGACRIH NI++G+ A +R+ E++ N G Y++L+ +Y + G+ E ++ +
Sbjct: 688 ASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSL 747
Query: 567 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+E G+KK PG S I++N VF +G+ SHPK + L +L +++
Sbjct: 748 ARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMK 796
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 134/529 (25%), Positives = 227/529 (42%), Gaps = 89/529 (16%)
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----- 203
T +VN G + +R FD++P KDV AWN MI+ Y+ NG A F ++
Sbjct: 155 TRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEI 214
Query: 204 DRDLTSWKQLING---LVNSRRIDA-----------------------------AISYFK 231
D ++ ++ LV+ R+I A S F
Sbjct: 215 RPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFD 274
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEA---------------------------------- 257
MP +WN++IS LI+NG +A
Sbjct: 275 DMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDIST 334
Query: 258 ----HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
H Y+ K+ +N ++ Y + G + A K F+ M DV WN +I +
Sbjct: 335 AMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQ 394
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA-RNQFTT 371
ND FFV+M+ +G PD T S+ +I + R +H ++ +
Sbjct: 395 NDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVV 454
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RLT 430
+ NA++ MYA+ G + SA F +P+ D+ISWN++I G A +G A +A+E+++ M
Sbjct: 455 IGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECK 514
Query: 431 DFKPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+ P+ T+V +L A ++ G + QG + + +K L A TC++D+ G+ G +
Sbjct: 515 EIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVA--TCLIDVYGKCGRLV 572
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI-KVGEIAGERVMELEPNNSGVYLILT 548
+AM+L ++ + S W A++ IH + K ++ GE + E + ++ L
Sbjct: 573 DAMSLFYQVPQE----SSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLL 628
Query: 549 EMYLSCGRREDAKRIFAQMKENGVK---KEPGCSWIQINDGGHVFLSGD 594
G E+ K F M+E G+K K GC + G++ ++ D
Sbjct: 629 SACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYD 677
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 197/493 (39%), Gaps = 89/493 (18%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-------------------- 48
A++LFD MP RD +WN MI G +NG A+ + ++M
Sbjct: 269 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQ 328
Query: 49 -------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
E D+F N +I + N++ A++ F M + DVV+WNS+
Sbjct: 329 LGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSI 388
Query: 90 ISGYVCNGLIDEALRVFHGMPLK-------DVVSWNLVIGALVNCQRMDLAESYFKEMG- 141
I+ Y N A F M L +VS ++ +C+ + G
Sbjct: 389 IAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGW 448
Query: 142 -ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
DV +V+ + G + A K+F+ +P KDV +WN +I GY NG A ++++
Sbjct: 449 LMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYK 508
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
M + K++I + TW SI+ G +++
Sbjct: 509 MMEE-----CKEIIPN---------------------QGTWVSILPAYAHVGALQQGMKI 542
Query: 261 LEKYPYSN----IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
+ +N + T +I Y + G + A+ +F + WN +I G +
Sbjct: 543 HGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHA 602
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG----RQIHAQAIKIARNQFTTV 372
E+ LK F +M + G PD+ TF S+L+ CS ++ G R + IK + +
Sbjct: 603 EKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHY--- 659
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTD 431
M+ + R G ++ A +P+ D W +++ HG E L F RL +
Sbjct: 660 -GCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE--LGKFASDRLFE 716
Query: 432 FKPDDITFVGVLS 444
++ + +LS
Sbjct: 717 VDSKNVGYYVLLS 729
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 110/253 (43%), Gaps = 47/253 (18%)
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
+ +HA + + Q +S ++ +YA G++ + F +P D+ +WNS+I
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193
Query: 413 YHGYAEKALELFERMRL-TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
++G+ +A+ F ++ L ++ +PD TF VL AC LVD + + C K Q
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC--GTLVDGRKIH--CWAFKLGFQWN 249
Query: 472 SAHYTCVVDLLGRFG-------LID------------------------EAMNLLNEIRA 500
++ + RFG L D +A+++L+E+R
Sbjct: 250 VFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL 309
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL------ILTEMYLSC 554
+GI+++ ++L C ++G+I+ ++ L G+ L MY
Sbjct: 310 EGIKMNFVTVVSILPVCP-----QLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKF 364
Query: 555 GRREDAKRIFAQM 567
G EDA++ F QM
Sbjct: 365 GNLEDARKAFQQM 377
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 85/196 (43%), Gaps = 15/196 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ R+ +A +LF ++PQ +VTWN +I + +G + + LF +M + D T+ +
Sbjct: 567 KCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVS 626
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVT----WNSMISGYVCNGLIDEALRVFHGMPLK- 112
+++ S V+ K F M+ + + M+ G ++ A MPL+
Sbjct: 627 LLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQP 686
Query: 113 DVVSWNLVIGALV---NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGR---IVEARK 166
D W ++GA N + A E+ +++V + ++ N G+ + + R
Sbjct: 687 DASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRS 746
Query: 167 LFDKMPAKDVQAWNLM 182
L + K W+ +
Sbjct: 747 LARERGLKKTPGWSTI 762
>gi|255551609|ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543938|gb|EEF45464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 185/611 (30%), Positives = 304/611 (49%), Gaps = 48/611 (7%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM- 109
++F + I+ L S + A+++FD M RD V WNSMI+ Y G EAL +F+ M
Sbjct: 4 NLFRITSKISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQMR 63
Query: 110 ---PLKDVVSWNLVIGAL--------------------------VNCQRMDL-------- 132
D ++ + A VN +D+
Sbjct: 64 NTNTKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAF 123
Query: 133 -AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
A FKEMG + SW ++ GR EA ++F+ MP K AWN MIAG G
Sbjct: 124 SAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYGE 183
Query: 192 VGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISY----FKQMPETCEKTWNS 243
+ + D+F++M + D ++ LI+ S + + + + NS
Sbjct: 184 IELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKNS 243
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
I+S+ + G + +A +E SW +I Y ++G V A +F+ + +++ W
Sbjct: 244 ILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVSW 303
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
MI G N GEE L+FFV M + PD+ TF +VL CS L L GR +H AI+
Sbjct: 304 TSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAIR 363
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
+ + V N ++ MYA+CG++ ++L F + D++S+N+++ HG A +AL+L
Sbjct: 364 NGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGKASEALQL 423
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
+E M KPD +TF+G+L CS++GL+++GR +F+ MK+ + L + H C+VD+LG
Sbjct: 424 YEDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHVACMVDMLG 483
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGV 543
R G + EA L+ + +V + ALLGAC H +++G G+ + LEPN
Sbjct: 484 RGGYLAEAKELVKKYSKTS-DVEASSCEALLGACSAHGEVEMGTYLGKTLKTLEPNKEIS 542
Query: 544 YLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL 603
Y++ + +Y G+ ++A+ + M + G+KK PGCSWI++ + F++G+ +P L
Sbjct: 543 YVLQSNLYCVRGQWKEAEMVRKAMVDEGLKKMPGCSWIEVRNKVTAFVAGNHLYPYTDEL 602
Query: 604 RYLLNLLHTEI 614
L L E+
Sbjct: 603 YKTLYFLEFEM 613
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 176/436 (40%), Gaps = 86/436 (19%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT---- 57
I A+ LFD+MP RDTV WN MI Y + GF A+ +F QM + D FT+
Sbjct: 21 IVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQMRNTNTKPDHFTFTATLSA 80
Query: 58 -----------------VIAGLMQSDNVQ--------------GAKEVFDGMEVRDVVTW 86
+I G S V A +VF M + V+W
Sbjct: 81 CAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAFSAGQVFKEMGDINEVSW 140
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM--GARD 144
S++ Y +G EA +F+ MP K ++WN +I L ++L F+EM +
Sbjct: 141 CSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYGEIELCLDMFREMRESLLE 200
Query: 145 VASWT-----------------IMVNGLV--------------------REGRIVEARKL 167
WT M++GLV + G + +A K+
Sbjct: 201 PDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKNSILSLYAKFGSLNDALKV 260
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
+ +WN +I Y+ G V A +FQ + ++++ SW +I G + + A+
Sbjct: 261 VESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVSWTSMITGYARNGYGEEAL 320
Query: 228 SYFKQMPETC----EKTWNSII---SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-Y 279
+F M C + T+ +++ S L G + H + +S N +V Y
Sbjct: 321 RFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAIRNGFSTYLYVGNGLVNMY 380
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G++ +I F + +D+ +N ++F G + E L+ + M G PD TF
Sbjct: 381 AKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGKASEALQLYEDMMTCGTKPDKMTFI 440
Query: 340 SVLTICSDLPTLDLGR 355
+L CS ++ GR
Sbjct: 441 GLLMTCSHSGLIEEGR 456
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 146/341 (42%), Gaps = 51/341 (14%)
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
SN+ T+ I G + A K+F+ M RD WN MI + +E L F QM
Sbjct: 3 SNLFRITSKISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQM 62
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC--- 383
+ + PD+ TFT+ L+ C+ + G +IHA I + + V+N++I MY +C
Sbjct: 63 RNTNTKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDA 122
Query: 384 ----------------------------GNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
G A F+ +P I+WN++I GL +G
Sbjct: 123 FSAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYG 182
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP--RSA 473
E L++F MR + +PD T+ ++SAC+ + + CM + ++ SA
Sbjct: 183 EIELCLDMFREMRESLLEPDQWTYSALISACT-----ESLEFLSGCMLHGLVIRSGWSSA 237
Query: 474 --HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
++ L +FG +++A+ + + + G ++ W A++ A +KVG +
Sbjct: 238 MEAKNSILSLYAKFGSLNDALKV---VESTG-RLTQVSWNAIIDA-----YMKVGYVNEA 288
Query: 532 RVM--ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
+M L N + + Y G E+A R F M N
Sbjct: 289 YLMFQSLPEKNIVSWTSMITGYARNGYGEEALRFFVAMASN 329
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 128/281 (45%), Gaps = 25/281 (8%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTV 58
+ R EA +F+ MP++ + WN MI G + G ++ + +F +M E D +TY+ +
Sbjct: 150 SGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYGEIELCLDMFREMRESLLEPDQWTYSAL 209
Query: 59 IAGLMQS-DNVQGAKEVFDGMEVRD-----VVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
I+ +S + + G + G+ +R + NS++S Y G +++AL+V
Sbjct: 210 ISACTESLEFLSGC--MLHGLVIRSGWSSAMEAKNSILSLYAKFGSLNDALKVVESTGRL 267
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
VSWN +I A + ++ A F+ + +++ SWT M+ G R G EA + F M
Sbjct: 268 TQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVSWTSMITGYARNGYGEEALRFFVAMA 327
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKM-HD----RDLTSWKQLINGLVN----SRRI 223
+ + L + C +A +M H +++ + NGLVN +
Sbjct: 328 SNCFLPDDFTFGAVL-HACSSLAVLGHGRMVHGCAIRNGFSTYLYVGNGLVNMYAKCGDL 386
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
D +I F + C K S ++L GL +A L+ Y
Sbjct: 387 DGSILAFHDI---CAKDLVSFNALLFAFGLHGKASEALQLY 424
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 14/186 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
M+ + EA +F +P+++ V+W MI GY +NG+ + A+ F M D FT+
Sbjct: 280 MKVGYVNEAYLMFQSLPEKNIVSWTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFG 339
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRD-----VVTWNSMISGYVCNGLIDEALRVFHGMPL 111
V+ S V G + G +R+ + N +++ Y G +D ++ FH +
Sbjct: 340 AVLHAC-SSLAVLGHGRMVHGCAIRNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICA 398
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKL 167
KD+VS+N ++ A + A +++M G + D ++ ++ G I E R
Sbjct: 399 KDLVSFNALLFAFGLHGKASEALQLYEDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRLF 458
Query: 168 FDKMPA 173
F+ M +
Sbjct: 459 FNSMKS 464
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 114/257 (44%), Gaps = 17/257 (6%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ Y K G L++A+ + ++N +I M+ V A +F + +++V
Sbjct: 242 NSILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIV 301
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDLAESYFKEMGA- 142
+W SMI+GY NG +EALR F M + + GA+++ C + + G
Sbjct: 302 SWTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCA 361
Query: 143 --RDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
+++ + NGLV + G + + F + AKD+ ++N ++ + +G A
Sbjct: 362 IRNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGKASEAL 421
Query: 197 DLFQKMHDRDLTSWKQLINGLV----NSRRIDAAISYFKQMPETCEKTWNS-----IISV 247
L++ M K GL+ +S I+ +F M ++ + ++ +
Sbjct: 422 QLYEDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHVACMVDM 481
Query: 248 LIRNGLVKEAHSYLEKY 264
L R G + EA ++KY
Sbjct: 482 LGRGGYLAEAKELVKKY 498
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 186/664 (28%), Positives = 331/664 (49%), Gaps = 82/664 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTY------ 55
++EA +FD++ + WN+++ K+G ++ LF +M E D +T+
Sbjct: 145 LKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKS 204
Query: 56 -----------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
N+++A +++ V A++VFD M RDV++W
Sbjct: 205 FSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISW 264
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESY----FK 138
NS+I+GYV NGL ++ L VF M + D+ + V + + + L + K
Sbjct: 265 NSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVK 324
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+R+ +++ + G + A+ +F +M + V ++ MIAGY G G A L
Sbjct: 325 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
F++M + ++ + ++N + ++ + E K H
Sbjct: 385 FEEMEEEGISPDVYTVTAVLN------CCARYRLLDEG------------------KRVH 420
Query: 259 SYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
++++ +N ++ Y + G + A VF M +D+ WN +I G +N
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYAN 480
Query: 318 EGLKFF-VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VS 373
E L F + ++E SPD T VL C+ L D GR+IH I RN + + V+
Sbjct: 481 EALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGY---IMRNGYFSDRHVA 537
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
N+++ MYA+CG + A + F + D++SW +I G HG+ ++A+ LF +MR +
Sbjct: 538 NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 597
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
D+I+FV +L ACS++GLVD+G +F+ M+++ ++P HY C+VD+L R G + +A
Sbjct: 598 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 657
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
+ + I T+WGALL CRIH+++K+ E E+V ELEP N+G Y+++ +Y
Sbjct: 658 FIENM---PIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 714
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
+ E KR+ ++ + G++K PGCSWI+I ++F++GDSS+P+ + L +
Sbjct: 715 AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRAR 774
Query: 614 IERE 617
+ E
Sbjct: 775 MIEE 778
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 159/578 (27%), Positives = 244/578 (42%), Gaps = 105/578 (18%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM 78
R N +R + ++G L+NA+ L + D+ + +D +K + DG
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCAD----SKSLKDGK 114
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFK 138
EV + + N G+V + + L + + NC + A F
Sbjct: 115 EVDNFIRGN----GFVIDSNLGSKLSLMY-----------------TNCGDLKEASRVFD 153
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ--------------------- 177
E+ W I++N L + G + LF KM + V+
Sbjct: 154 EVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG 213
Query: 178 ------------------AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
N ++A YL N V A +F +M +RD+ SW +ING V+
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 220 SRRIDAAISYFKQMPET-CEKTWNSIISVLIRNG------LVKEAHSYLEKYPYSNIASW 272
+ + +S F QM + E +I+SV L + HS K +S +
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 273 TNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
N ++ Y + G++ SA VF M+ R V + MI G L E +K F +M+E G
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT-VSNAMITMYARCGNIQSAL 390
SPD T T+VL C+ LD G+++H + IK F VSNA++ MYA+CG++Q A
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVH-EWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE-RMRLTDFKPDDITFVGVLSACSYA 449
L FS + + DIISWN+II G + + YA +AL LF + F PD+ T VL AC+
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 450 GLVDQGRYYFD-CMKNKYFLQPRSAH-----------------------------YTCVV 479
D+GR M+N YF A+ +T ++
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
G G EA+ L N++R GIE + +LL AC
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 218/503 (43%), Gaps = 84/503 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYN 56
++N R+ A+ +FD+M +RD ++WN +I GY NG + + +F QM E D+ T
Sbjct: 241 LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 57 TVIAGLMQS-----------------------------------DNVQGAKEVFDGMEVR 81
+V AG S ++ AK VF M R
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR 360
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC----QRMDLAESYF 137
VV++ SMI+GY GL EA+++F M + + + A++NC + +D +
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ + D+ + N L+ + G + EA +F +M KD+ +WN +I GY N
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYAN 480
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A LF N L+ +R + C + +S +
Sbjct: 481 EALSLF---------------NLLLEEKRFSP-----DERTVACVLPACASLSAFDKG-- 518
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+E H Y+ + Y + N +V Y + G + A +F+ + ++D+ W VMI G G
Sbjct: 519 -REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 577
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI-----HAQAIKIARN 367
+ G+E + F QM+++G D +F S+L CS +D G + H I+
Sbjct: 578 HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVE 637
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYHGYAEKALELFER 426
+ + + M AR G++ A ++PI D W +++CG H + A ++ E
Sbjct: 638 HYACI----VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE- 692
Query: 427 MRLTDFKPDDITFVGVLSACSYA 449
++ + +P++ + VL A YA
Sbjct: 693 -KVFELEPENTGYY-VLMANIYA 713
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 153/339 (45%), Gaps = 45/339 (13%)
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
SN+ S +++ Y G++ A +VF+ + WN+++ L ++ + F +M
Sbjct: 129 SNLGSKLSLM--YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM 186
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
SG D+ TF+ V S L ++ G Q+H +K + +V N+++ Y + +
Sbjct: 187 MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRV 246
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
SA F + D+ISWNSII G +G AEK L +F +M ++ + D T V V + C
Sbjct: 247 DSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGC 306
Query: 447 SYAGLVDQGRYYFDCMKNKYF-----------------------------LQPRS-AHYT 476
+ + L+ GR F + RS YT
Sbjct: 307 ADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYT 366
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW--GALLGACRIHNNIKVGEIAGERVM 534
++ R GL EA+ L E+ +GI SP V+ A+L C + + G+RV
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGI--SPDVYTVTAVLNCCARYRLLD----EGKRVH 420
Query: 535 E-LEPNNSG----VYLILTEMYLSCGRREDAKRIFAQMK 568
E ++ N+ G V L +MY CG ++A+ +F++M+
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 254/444 (57%), Gaps = 4/444 (0%)
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
A+D N +I Y N + A+ +F +M RD+ SW + +V +DAA S F +
Sbjct: 233 AEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDE 292
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
MPE +WN+++ + G ++A ++ P N+ SW+ V+ Y + G++ A +F
Sbjct: 293 MPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIF 352
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ M +++ W +M+ + L EE + F +M ++ D S+L C++ +L
Sbjct: 353 DKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLA 412
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGL 411
LG++IH + ++ T V NA++ M+ +CG + A F + + D++SWN II G
Sbjct: 413 LGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGF 472
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
A HG EKALELF +M+ F PD +T + VLSAC++ GLV++GR +F M+ Y ++P+
Sbjct: 473 AMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQ 532
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
HY C+VDLLGR GLI EA++++ + + EV +WG+LL ACR+H N++ E+A
Sbjct: 533 IEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEV---IWGSLLSACRLHKNVEYAELAVN 589
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
+ L+P+++G Y +L+ +Y G+ D + QMK G +K G SWI++N+ H F
Sbjct: 590 ELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNEAFHEFT 649
Query: 592 SGDSSHPKFHRLRYLLNLLHTEIE 615
GD HP+ ++ +++ L + ++
Sbjct: 650 VGDRKHPESDQISDMIDRLSSHVK 673
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 197/439 (44%), Gaps = 81/439 (18%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
DT N +I Y KN L +A +F++M RD+ ++NT +A +++ V A+ +FD M
Sbjct: 235 DTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMP 294
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKE 139
+D V+WN+M+ GY G ++A +F MP ++VVSW+ V+ A M++A F +
Sbjct: 295 EKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDK 354
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK----DVQAWNLMIAGYLDNGCVGVA 195
M A+++ +WTIMV+ ++G + EA +LF +M DV A ++A ++G + +
Sbjct: 355 MPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALG 414
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
+ + + + R L+ + N L++ + + G V
Sbjct: 415 KRIHRHVRQRKLSRSTLVCNALMD---------------------------MFCKCGCVN 447
Query: 256 EA-HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
A + + + ++ SW N+I+G F M +
Sbjct: 448 RADYIFDTEIVEKDLVSW-NIIIGGFAM------------------------------HG 476
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ-----AIKIARNQF 369
GE+ L+ F QMK+ G PD T +VL+ C+ + ++ GR+ A IK +
Sbjct: 477 PGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHY 536
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHG---YAEKALELFE 425
M+ + R G I+ A+ +P + + W S++ H YAE A+
Sbjct: 537 ----GCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAELAVN--- 589
Query: 426 RMRLTDFKPDDITFVGVLS 444
L++ +P VLS
Sbjct: 590 --ELSNLQPSSAGNYAVLS 606
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 153/286 (53%), Gaps = 22/286 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + A+++FD+MP++DTV+WN M+ GY K G + A LF +MP R++ +++TV++
Sbjct: 278 VRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVS 337
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVS 116
+ +++ A+ +FD M +++VTW M+S GL++EA R+F M DV++
Sbjct: 338 AYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIA 397
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFD-KM 171
++ A + L + + + R ++ T++ N L+ + G + A +FD ++
Sbjct: 398 VVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEI 457
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAI 227
KD+ +WN++I G+ +G A +LF +M + D + +++ + ++
Sbjct: 458 VEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGR 517
Query: 228 SYFKQM-------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
+F M P+ + + ++ +L R GL+KEA +++ P+
Sbjct: 518 RFFANMETDYGIKPQI--EHYGCMVDLLGRGGLIKEAVDMIKRMPW 561
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 136/273 (49%), Gaps = 13/273 (4%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N + +A+ +FD+M RD V+WN + + G +D A +F++MPE+D ++NT++ G
Sbjct: 248 KNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSWNTMLDG 307
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
++ + A E+F M R+VV+W++++S Y G ++ A +F MP K++V+W +++
Sbjct: 308 YAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMV 367
Query: 122 GALVNCQRMDLAESYFKEMG----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
A ++ A F EM DV + ++ G + +++ + + +
Sbjct: 368 SACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQRKLS 427
Query: 178 AWNLMIAGYLDN----GCVGVAEDLFQ-KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
L+ +D GCV A+ +F ++ ++DL SW +I G + A+ F Q
Sbjct: 428 RSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFAQ 487
Query: 233 MPETC----EKTWNSIISVLIRNGLVKEAHSYL 261
M + T +++S GLV+E +
Sbjct: 488 MKQQGFHPDAVTLINVLSACTHMGLVEEGRRFF 520
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 113/285 (39%), Gaps = 46/285 (16%)
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFT-SVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
N L L F+ + P TFT S L L R HA +K+ + T
Sbjct: 182 NSLPHAALAVFLDV----PLRQRGTFTYSFLIKALAAAGLTPVRGAHAHVVKLGSAEDTF 237
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC---------------------- 409
V NA+I Y++ + A F + D++SWN+ +
Sbjct: 238 VGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEKD 297
Query: 410 ---------GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
G A G AEKA ELF+RM + +++ V+SA G ++ R FD
Sbjct: 298 TVSWNTMLDGYAKAGEAEKAFELFQRMPGRNV----VSWSTVVSAYCKKGDMEMARVIFD 353
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
M K + +T +V + GL++EA L E+ IE+ ++L AC
Sbjct: 354 KMPAKNLVT-----WTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAES 408
Query: 521 NNIKVGEIAGERVMELEPNNSGVYL-ILTEMYLSCGRREDAKRIF 564
++ +G+ V + + + S + L +M+ CG A IF
Sbjct: 409 GSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIF 453
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 195/662 (29%), Positives = 326/662 (49%), Gaps = 73/662 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------------- 47
++ I A+ +FD +P++ TVTW MI G K G ++ LF Q+
Sbjct: 194 LKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILS 253
Query: 48 --------------------------PERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
E+D N +I ++ V+ A ++FDGM +
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNK 313
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMP---LK-DVVSWNLVIGALVNCQRMDLAESYF 137
++++W +++SGY N L EA+ +F MP LK D+ + + ++ + + ++
Sbjct: 314 NIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVH 373
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
++ + + + N L+ + + EARK+FD A DV +N MI GY G
Sbjct: 374 AYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQW 433
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
D HD + + V+ R A+++ GL
Sbjct: 434 ELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSL---------------------GL 472
Query: 254 VKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
K+ H + K+ + +I + + +I Y + + VF+ M +D+ +WN M G +
Sbjct: 473 SKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQ 532
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
EE L F++++ S PD TF ++T +L +L LG++ H Q +K +
Sbjct: 533 QSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYI 592
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+NA++ MYA+CG+ + A F S D++ WNS+I A HG KAL++ E+M
Sbjct: 593 TNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGI 652
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
+P+ ITFVGVLSACS+AGLV+ G F+ M ++ ++P + HY C+V LLGR G ++EA
Sbjct: 653 EPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNEAR 711
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
L+ ++ + + VW +LL C N+++ E A E + +P +SG + +L+ +Y
Sbjct: 712 ELIEKMPT---KPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYA 768
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
S G DAK++ +MK GV KEPG SWI+IN H+FLS D SH K +++ +L+ L
Sbjct: 769 SKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLLV 828
Query: 613 EI 614
+I
Sbjct: 829 QI 830
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 145/627 (23%), Positives = 266/627 (42%), Gaps = 94/627 (14%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF-------NQMP------------- 48
A+ +F+KMP+R+ VTW+ M+ +GF + ++ +F P
Sbjct: 98 ARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACS 157
Query: 49 ----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
+RD++ +I ++ N+ A+ VFD + + VTW
Sbjct: 158 GLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTW 217
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDLAESYFKEMGA--- 142
+MISG V G +L++F+ + +VV ++ +++ C + E K++ A
Sbjct: 218 TTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEG-GKQIHAHIL 276
Query: 143 -----RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+D + ++++ V+ GR+ A KLFD MP K++ +W +++GY N A +
Sbjct: 277 RYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAME 336
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
LF M L + ++ S A+ + Q+
Sbjct: 337 LFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQV------------------------ 372
Query: 258 HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFG---LGEN 313
H+Y K N + TN ++ Y + + A KVF++ DV ++N MI G LG
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQ 432
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
+ L F M+ P TF S+L + L +L L +QIH K N
Sbjct: 433 WELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAG 492
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
+A+I +Y+ C ++ + L F + + D++ WNS+ G E+AL LF ++L+ +
Sbjct: 493 SALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDR 552
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
PD+ TFV +++A + G+ F C K L+ ++D+ + G ++A
Sbjct: 553 PDEFTFVDMVTAAGNLASLQLGQ-EFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHK 611
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM--ELEPNNSGVYLILTEMY 551
+ + + W +++ + H + E++M +EPN Y+ +
Sbjct: 612 AFDSAASRDV----VCWNSVISSYANHGEGRKALQMLEKMMCEGIEPN----YITFVGVL 663
Query: 552 LSC---GRREDAKRIFAQMKENGVKKE 575
+C G ED + F M G++ E
Sbjct: 664 SACSHAGLVEDGLKQFELMLRFGIEPE 690
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 199/414 (48%), Gaps = 39/414 (9%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
E D + N ++ ++ + A++VF+ M R++VTW++M+S +G +E+L VF
Sbjct: 76 ELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLD 135
Query: 109 M--PLKDVVSWNLVIGALVNCQRMD---------LAESYFKEMGARDVASWTIMVNGLVR 157
K+ + ++ + C +D L K RDV T++++ ++
Sbjct: 136 FWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLK 195
Query: 158 EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL 217
EG I AR +FD +P K W MI+G + G V+ LF ++ + ++ +G
Sbjct: 196 EGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVP-----DGY 250
Query: 218 VNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
+ S + A SI+ L G K+ H+++ +Y + AS NV++
Sbjct: 251 ILSTVLSAC----------------SILPFL-EGG--KQIHAHILRYGHEKDASLMNVLI 291
Query: 278 -GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G V +A K+F+ M +++ W ++ G +N L +E ++ F M + G PD
Sbjct: 292 DSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMF 351
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
+S+LT C+ L L+ G Q+HA IK + V+N++I MYA+C + A F
Sbjct: 352 ACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIF 411
Query: 397 PIHDIISWNSIICGLAYHGYA---EKALELFERMRLTDFKPDDITFVGVLSACS 447
D++ +N++I G + G AL +F MR +P +TFV +L A +
Sbjct: 412 AADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASA 465
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 154/324 (47%), Gaps = 25/324 (7%)
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG-----YLDN---------GCVGV 194
TI + G R+++ R L D + +V ++++G YL N G +
Sbjct: 38 TIGIRGRREFARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVY 97
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS-IISVLIR--N 251
A +F+KM +R+L +W +++ + + ++ F T + + N I+S I+ +
Sbjct: 98 ARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACS 157
Query: 252 GL-------VKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
GL V + S+L K + ++ T +I Y + G + A VF+ + + W
Sbjct: 158 GLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTW 217
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
MI G + L+ F Q+ E PD ++VL+ CS LP L+ G+QIHA ++
Sbjct: 218 TTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR 277
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
+ ++ N +I Y +CG +++A F +P +IISW +++ G + ++A+EL
Sbjct: 278 YGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMEL 337
Query: 424 FERMRLTDFKPDDITFVGVLSACS 447
F M KPD +L++C+
Sbjct: 338 FTSMPKFGLKPDMFACSSILTSCA 361
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 304/578 (52%), Gaps = 43/578 (7%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC 127
+ A+ VFD +V ++N++IS Y ++ A ++F MP D VS+N +I A
Sbjct: 59 LSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARR 118
Query: 128 QRMDLAESYFKEM--GARDVASWTIM-------VN-GLVREGRIVEARKLFDKMPAKDVQ 177
A F EM D+ +T+ +N GL+R+ + D V
Sbjct: 119 GDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSY----VS 174
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKM-HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
N +I Y NG + A +F + DRD SW ++ + R A+ + +M
Sbjct: 175 VGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEM--- 231
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI------- 289
T +I + V A + ++ + GY + VGS +
Sbjct: 232 ---TVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKC 288
Query: 290 --------KVFELMTTRDVTVWNVMIFGLG-ENDLGEEGLKFFVQMKESGPSPDNATFTS 340
KVF+ ++ D+ +WN MI G DL +E L+ F Q++ G PD+ +
Sbjct: 289 GGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVC 348
Query: 341 VLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
V++ CS++ + GRQ+H A+K I N+ + V+NA+I MY++CGN++ A F ++P
Sbjct: 349 VISACSNMSSPSQGRQVHGLALKLDIPSNRIS-VNNALIAMYSKCGNLRDAKTLFDTMPE 407
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
H+ +S+NS+I G A HG ++L LF+RM DF P +ITF+ VL+AC++ G V+ G+ Y
Sbjct: 408 HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIY 467
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F+ MK K+ ++P + H++C++DLLGR G + EA L+ I D W ALLGACR
Sbjct: 468 FNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDP---GFFXWSALLGACR 524
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
IH N+++ A R+++L+P N+ Y++L +Y GR +DA + M++ GVKK+PGC
Sbjct: 525 IHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGC 584
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
SWI++N H+F++ D+ HP +++ L + +I++
Sbjct: 585 SWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKK 622
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 202/460 (43%), Gaps = 40/460 (8%)
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
C+R+ A F +V S+ +++ +E + A +LFD+MP D ++N +IA
Sbjct: 55 KCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAA 114
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
Y G A LF +M + L ++G++ + I+
Sbjct: 115 YARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINV-------------------- 154
Query: 246 SVLIRNGLVKEAHSYLEKYPYSNIASWTN-VIVGYFEMGEVGSAIKVFE-LMTTRDVTVW 303
GL+++ H+ + S N +I Y + G + A ++F L RD W
Sbjct: 155 ------GLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSW 208
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
N M+ ++ G + L+ +++M G D T SVLT +++ L G Q HA+ IK
Sbjct: 209 NSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIK 268
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLE-FSSVPIHDIISWNSIICGLA-YHGYAEKAL 421
+Q + V + +I +Y++CG + F + D++ WN++I G + Y +++AL
Sbjct: 269 SGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEAL 328
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
E F +++ +PDD + V V+SACS QGR R + ++ +
Sbjct: 329 ECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAM 388
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
+ G + +A L + + E + + +++ H +R++E++ +
Sbjct: 389 YSKCGNLRDAKTLFDTMP----EHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPT 444
Query: 542 GVYLILTEMYLSC---GRREDAKRIFAQMKEN-GVKKEPG 577
+ I + +C GR ED K F MK+ G++ E G
Sbjct: 445 NITFI--SVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAG 482
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/490 (22%), Positives = 202/490 (41%), Gaps = 67/490 (13%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
R+ A+ +FD + ++N +I Y K +++ A LF++MP+ D +YNT+IA +
Sbjct: 58 RLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYAR 117
Query: 65 SDNVQGAKEVF----------DGMEVRDVVTW---------------------------N 87
+ Q A ++F DG + ++T N
Sbjct: 118 RGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGN 177
Query: 88 SMISGYVCNGLIDEALRVFHGMPL-KDVVSWNLVIGALVNCQRMDLAESYFKEMGAR--- 143
++I+ Y NG + EA R+FH + +D VSWN ++ A + + A + EM R
Sbjct: 178 ALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLI 237
Query: 144 -DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD-----NGCVGVAED 197
D+ + ++ ++ + K+ + + +G +D GC+
Sbjct: 238 VDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRK 297
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRI-DAAISYFKQM------PETCEKTWN-SIISVLI 249
+F ++ + DL W +I+G + D A+ F+Q+ P+ C S S +
Sbjct: 298 VFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMS 357
Query: 250 RNGLVKEAHSYLEKY--PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
++ H K P + I+ +I Y + G + A +F+ M + +N MI
Sbjct: 358 SPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMI 417
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
G ++ +G + L F +M E +P N TF SVL C+ ++ G+ + +
Sbjct: 418 AGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIY----FNMMKQ 473
Query: 368 QFTTVSNA-----MITMYARCGNIQSALLEFSSVPIHD-IISWNSIICGLAYHGYAEKAL 421
+F A MI + R G + A ++P W++++ HG E A+
Sbjct: 474 KFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAI 533
Query: 422 ELFERMRLTD 431
+ R+ D
Sbjct: 534 KAANRLLQLD 543
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 32/220 (14%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAG 61
+++A+ LFD MP+ +TV++N MI GY ++G ++ LF +M E D T+ +V+A
Sbjct: 395 LRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAA 454
Query: 62 LMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD-VV 115
+ V+ K F+ M+ + + ++ MI G + EA R+ +P
Sbjct: 455 CAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFF 514
Query: 116 SWNLVIGALV---NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
W+ ++GA N + A + ++ + A + ++ N GR+ +A + M
Sbjct: 515 XWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMR 574
Query: 173 AKDVQAWNLMIAGYLDNGC----------VGVAEDLFQKM 202
+ V+ GC + VAED F M
Sbjct: 575 DRGVKK---------KPGCSWIEVNRRIHIFVAEDTFHPM 605
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
+F L C L G+ +HA IK T +SN + +Y++C + +A F
Sbjct: 10 SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
++ S+N++I A Y E A +LF+ M +PD +++ +++A + G
Sbjct: 70 HDCNVFSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRG 119
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 199/667 (29%), Positives = 323/667 (48%), Gaps = 84/667 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTY- 55
+R A +F KMP+RD +WNVM+ GY K GFL+ A+ L+++M D++T+
Sbjct: 140 VRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFP 199
Query: 56 ----------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVR 81
N ++ + +V+ A++VFDGM +
Sbjct: 200 CVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLT 259
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAE-SYFKEM 140
D ++WN+MI+G+ N + L +F M L+D V NL+ V L++ + KE+
Sbjct: 260 DCISWNAMIAGHFENHECEAGLELFLHM-LEDEVEPNLMTITSVTVASGLLSDLDFAKEI 318
Query: 141 GA----RDVASWTIMVNGLVRE----GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A R A+ N L++ GR+ EA +F +M +D +W MI+GY NG
Sbjct: 319 HALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFP 378
Query: 193 GVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL 248
A +++ M D + + + R+D I + + I ++
Sbjct: 379 DKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHE-----LATSKGFIRYIV 433
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+ N LV E Y S I + AI+VF+ M +DV W+ MI
Sbjct: 434 VANALV-------EMYAKSKI---------------IEKAIEVFKYMPDKDVISWSSMIA 471
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
G N E L +F M + P++ TF + L C+ +L G++IHA ++
Sbjct: 472 GFCFNHKNFEALYYFRHML-ADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIAS 530
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
V NA++ +Y +CG A +F + D++SWN ++ G HG+ + AL F M
Sbjct: 531 EGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEML 590
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
T PD++TFV +L CS AG+V QG F M KY + P HY C+VDLL R G +
Sbjct: 591 ETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRL 650
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
E N +N + I VWGALL CRIH NI++GE+A + V+ELEPN++G +++L+
Sbjct: 651 TEGYNFINRMP---ITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLS 707
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
++Y G + ++ M+ G++ + GCSW+++ H FL+ D SHP+ + +L+
Sbjct: 708 DLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLD 767
Query: 609 LLHTEIE 615
++ ++
Sbjct: 768 GIYERMK 774
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 186/400 (46%), Gaps = 46/400 (11%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PL 111
N +++ L++ A +VF M RDV +WN M+ GY G ++EAL ++H M
Sbjct: 133 NAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGAR 192
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKL 167
DV ++ V+ + + + + + ++N LV + G + ARK+
Sbjct: 193 PDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKV 252
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
FD M D +WN MIAG+ +N +LF M
Sbjct: 253 FDGMSLTDCISWNAMIAGHFENHECEAGLELFLHM------------------------- 287
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLV------KEAHSYLEKYPYSNIASWTNVIVG-YF 280
+ + E +I SV + +GL+ KE H+ K ++ ++ N ++ Y
Sbjct: 288 -----LEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYS 342
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+G +G A VF M TRD W MI G +N ++ L+ + M+ + SPD+ T S
Sbjct: 343 SLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVAS 402
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
L C+ L LD+G ++H A ++ V+NA++ MYA+ I+ A+ F +P D
Sbjct: 403 ALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKD 462
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+ISW+S+I G ++ +AL F M L D KP+ +TF+
Sbjct: 463 VISWSSMIAGFCFNHKNFEALYYFRHM-LADVKPNSVTFI 501
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 205/462 (44%), Gaps = 47/462 (10%)
Query: 127 CQRMDLAESYFKEMGARDVASWTI-------MVNGLVREGRIVEARKLFDKMPAKDVQAW 179
C+ AE + G D A T M++ LVR G A K+F KMP +DV +W
Sbjct: 104 CEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSW 163
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N+M+ GY G + A DL+ +M L R D + F + +C
Sbjct: 164 NVMVGGYGKAGFLEEALDLYHRM--------------LWAGARPD--VYTFPCVLRSCGG 207
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTR 298
+ + +E H+++ ++ N +V Y + G+V +A KVF+ M+
Sbjct: 208 VPDLTMG--------REVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLT 259
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
D WN MI G EN E GL+ F+ M E P+ T TSV L LD ++IH
Sbjct: 260 DCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIH 319
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
A A+K N++I MY+ G + A FS + D +SW ++I G +G+ +
Sbjct: 320 ALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPD 379
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
KALE++ M + + PDD+T L+AC+ G +D G + +K F++ Y V
Sbjct: 380 KALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIR-----YIVV 434
Query: 479 ----VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL-GACRIHNNIKVGEIAGERV 533
V++ + +I++A+ + + + W +++ G C H N + +
Sbjct: 435 ANALVEMYAKSKIIEKAIEVFKYMPDKDV----ISWSSMIAGFCFNHKNFEALYYFRHML 490
Query: 534 MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
+++P NS ++ + G K I A + G+ E
Sbjct: 491 ADVKP-NSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASE 531
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 328 ESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
ES P PD + ++ +C + G + A + NAM++M R G
Sbjct: 86 ESSPEPPDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGET 145
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
A F+ +P D+ SWN ++ G G+ E+AL+L+ RM +PD TF VL +C
Sbjct: 146 WHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSC 205
Query: 447 SYAGLVDQGR 456
+ GR
Sbjct: 206 GGVPDLTMGR 215
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 195/670 (29%), Positives = 329/670 (49%), Gaps = 95/670 (14%)
Query: 6 IQEAQNLFDKMPQR-DTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-------------- 50
I A+ LFD+M +R D V+WN +I Y NG A+ LF +M +
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 51 -------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVT 85
D++ N ++A ++ + A +FD ++ +D +T
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180
Query: 86 WNSMISGYVCNGLIDEALRVFHGM----------PLKDVVSWNLVIGALVNCQRMDLAES 135
WNSMI+G+ NGL +EAL+ F G+ L +++ + +G L+N
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLN--------- 231
Query: 136 YFKEMGARDVASW--------TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
KE+ A + +W +++ + + A +FDKM KD+ +W +IA Y
Sbjct: 232 -GKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYA 290
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
N C A L +K+ + + +I + A S + +
Sbjct: 291 QNNCHTEALKLLRKVQTKGMDVDTMMIGSTL------LACSGLRCLSHA----------- 333
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
KE H Y K S++ +I Y + G + A ++FE + +DV W MI
Sbjct: 334 -------KEVHGYTLKRGLSDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMI 386
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
N L E L F MKE+ PD+ T S+L+ + L L+ G++IH +
Sbjct: 387 SCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFM 446
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
+ N+++ MYA CG++++A F ++ W ++I HG + A+ELF M
Sbjct: 447 LEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIM 506
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
PD ITF+ +L ACS++GL+++G+ + MK KY L+P HY C+VDLLGR
Sbjct: 507 EDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANH 566
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLIL 547
++EA + + ++ IE + VW A LGACRIH+N K+GEIA +++++L+P++ G Y+++
Sbjct: 567 LEEAYHFVKSMQ---IEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLI 623
Query: 548 TEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
+ ++ + GR +D + + +MK G+KK PGCSWI++ + H FL D SHP+ +++ L
Sbjct: 624 SNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKL 683
Query: 608 NLLHTEIERE 617
+ ++E+E
Sbjct: 684 AQITEKLEKE 693
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 148/533 (27%), Positives = 243/533 (45%), Gaps = 51/533 (9%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVR-DVVTWNSMISGYVCNGLIDEALRVFHGMP 110
+F N++++ + +++ GA+++FD M R DVV+WNS+IS Y NG EAL +F M
Sbjct: 45 VFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQ 104
Query: 111 LKDV-VSWNLVIGALVNCQR-------MDLAESYFKEMGARDVASWTIMVNGLVREGRIV 162
V + ++ AL C+ M++ + K DV +V VR G++
Sbjct: 105 KAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMS 164
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK-QLINGLVNSR 221
A ++FD++ KD WN MIAG+ NG A F + D +L + LI+ L S
Sbjct: 165 YAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASG 224
Query: 222 RIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY-LEKYPYSNIASWTNVIVGYF 280
R+ + NG KE H+Y ++ + SN+ +I Y
Sbjct: 225 RLG-----------------------YLLNG--KEIHAYAMKNWLDSNLRIGNTLIDMYS 259
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ V A VF+ M +D+ W +I +N+ E LK +++ G D S
Sbjct: 260 KCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGS 319
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
L CS L L +++H +K + + N +I +YA CGNI A F S+ D
Sbjct: 320 TLLACSGLRCLSHAKEVHGYTLKRGLSDL-MMQNMIIDVYADCGNINYATRMFESIKCKD 378
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
++SW S+I ++G A +AL +F M+ T +PD IT V +LSA + +++G+
Sbjct: 379 VVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHG 438
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
+ K F+ S +VD+ G ++ A + R+ S +W ++ A +H
Sbjct: 439 FIFRKGFMLEGST-VNSLVDMYACCGSLENAYKVFICTRSK----SLVLWTTMINAYGMH 493
Query: 521 NNIKVGEIAGE--RVME---LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
G+ A E +ME L P++ +L L G + KR+ MK
Sbjct: 494 GR---GKAAVELFSIMEDQKLIPDHI-TFLALLYACSHSGLINEGKRLLETMK 542
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/491 (21%), Positives = 196/491 (39%), Gaps = 89/491 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF------NQMPE----- 49
+R ++ A +FD++ ++D +TWN MI G+ +NG + A+ F N P+
Sbjct: 158 VRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLI 217
Query: 50 ---------------RDMFTY-------------NTVIAGLMQSDNVQGAKEVFDGMEVR 81
+++ Y NT+I + V A VFD M +
Sbjct: 218 SILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINK 277
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA-LVNCQRMDL------AE 134
D+++W ++I+ Y N EAL++ + K + ++IG+ L+ C +
Sbjct: 278 DLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVH 337
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
Y + G D+ ++++ G I A ++F+ + KDV +W MI+ Y+
Sbjct: 338 GYTLKRGLSDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVH------ 391
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKTWNSIISVLIRNGL 253
NGL N A+ F M ET E +++S+L
Sbjct: 392 --------------------NGLANE-----ALGVFYLMKETSVEPDSITLVSILSAAAS 426
Query: 254 V------KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVM 306
+ KE H ++ + + S N +V Y G + +A KVF ++ + +W M
Sbjct: 427 LSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTM 486
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG-RQIHAQAIKIA 365
I G + G+ ++ F M++ PD+ TF ++L CS ++ G R + K
Sbjct: 487 INAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQ 546
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELF 424
+ ++ + R +++ A S+ I W + + H + K L
Sbjct: 547 LEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIH--SNKKLGEI 604
Query: 425 ERMRLTDFKPD 435
+L D PD
Sbjct: 605 AAQKLLDLDPD 615
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 4/175 (2%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ G D+ TF VL C + + G +IH IK + V+N++++MYA+C +
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 386 IQSALLEFSSV-PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
I A F + +D++SWNSII + +G +AL LF M+ + T V L
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 445 ACSYAGLVDQG-RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
AC + G + +K+ L A+ +V + RFG + A + +E+
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVAN--ALVAMHVRFGKMSYAARIFDEL 173
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 207/668 (30%), Positives = 323/668 (48%), Gaps = 91/668 (13%)
Query: 2 RNARIQEAQNLFDKMPQ--RDTVTWNVMIRGYFKNGFLDN---AMCLFNQMPERDMFTYN 56
+ + A LFD + +D V+WN +I + +N + A+ LF +M + N
Sbjct: 58 KTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPN 117
Query: 57 T-VIAGLMQ-----SDNVQG----------------------------------AKEVFD 76
+AG+ SD V G A+++FD
Sbjct: 118 AHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFD 177
Query: 77 GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESY 136
M R+ V+W +MISGY + + D+A+ VF M ++ + + ++++ L
Sbjct: 178 RMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSA----LTSDV 233
Query: 137 FKEMGARDVASWTI---------MVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMI 183
F G R V S I + N LV + G + +A + F+ K+ W+ M+
Sbjct: 234 FVYTG-RQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMV 292
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS 243
GY G A LF KMH + + + G++N+ A+ KQM
Sbjct: 293 TGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQM---------- 342
Query: 244 IISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
HS+ K + + + V+ Y + G + A K FE + DV +
Sbjct: 343 --------------HSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVL 388
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
W +I G +N E GL + +M+ P+ T SVL CS L LD G+Q+HA+ I
Sbjct: 389 WTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARII 448
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
K + +A+ MY +CG++ L F +P D+ISWN++I GL+ +G+ KALE
Sbjct: 449 KYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALE 508
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
LFE+M L KPD +TFV +LSACS+ GLVD+G YF M +++ + P HY C+VD+L
Sbjct: 509 LFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDIL 568
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
R G ++EA I + ++ +W LLGAC+ H N ++G AGE+++EL S
Sbjct: 569 SRAGKLNEAKEF---IESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESS 625
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHR 602
Y++L+ +Y + G RE+ +R+ MK GV KEPGCSWI++ HVF+ GD+ HP+
Sbjct: 626 AYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDE 685
Query: 603 LRYLLNLL 610
+R L LL
Sbjct: 686 IRLELELL 693
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P + L C+ + GR +HA+ +K V+N + +YA+ ++ AL
Sbjct: 9 PQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL 68
Query: 393 FSSVPIHDI--ISWNSIICGLAYHGYAEK---ALELFER-MRLTDFKPDDITFVGVLSAC 446
F S+ +D +SWNS+I + + + A+ LF R MR + P+ T GV SA
Sbjct: 69 FDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAA 128
Query: 447 SYAGLVDQGR 456
S V G+
Sbjct: 129 SNLSDVVAGK 138
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/521 (32%), Positives = 274/521 (52%), Gaps = 12/521 (2%)
Query: 108 GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
G + N +IG C R A F +M R++ SW M+ G + G + ARKL
Sbjct: 92 GFKRPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKL 151
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRI 223
FD+M KDV +WN ++ Y GC A L++ D+ S+ ++ V + +
Sbjct: 152 FDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKEL 211
Query: 224 DAAISYFKQMPETCEKT----WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
A Q+ + +SI+ + G ++ A + ++ +I +WT ++ GY
Sbjct: 212 QLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGY 271
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G++ SA ++F M ++ W+ +I G N LG E L +F +M + G +P+ TF+
Sbjct: 272 AKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFS 331
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP-I 398
S L C+ + L G+Q+H I+ T V +++I MY++CG ++++ F +
Sbjct: 332 SCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNK 391
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
D++ WN++I LA +G+ EKA+++F M + KPD ITF+ +LSACS++GLV +G +
Sbjct: 392 QDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRF 451
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F M + + P HY C++DLLGR G E L+NE+ + VW ALLG CR
Sbjct: 452 FKAMTYDHGVFPDQEHYACLIDLLGRAGCFVE---LVNELENMSCKPDDRVWSALLGVCR 508
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
IHNNI++G ERV+EL+P +S Y+ L +Y G+ E +++ M E ++KE G
Sbjct: 509 IHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGI 568
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREIL 619
SWI + + H F++ D HP + LL L E + L
Sbjct: 569 SWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTEEDFL 609
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 181/347 (52%), Gaps = 25/347 (7%)
Query: 21 TVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
T+ N +I YF+ G A +F++M R+++++N ++AG + +V A+++FD M
Sbjct: 98 TIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMME 157
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESY 136
+DVV+WN+++ Y G +EA+ ++ D+ S+ V+ V + + LA+
Sbjct: 158 KDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQV 217
Query: 137 FKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
++ S ++ + +V + G + AR LFD+M KD+ AW +++GY G +
Sbjct: 218 HGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDM 277
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIIS 246
A +LF +M +++ SW LI+G + A+ YF +M PE + T++S +
Sbjct: 278 NSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPE--QYTFSSCLC 335
Query: 247 VL-----IRNGLVKEAHSYL-EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR-D 299
+++G K+ H YL Y N +++I Y + G + ++ VF LM + D
Sbjct: 336 ACASIAALKHG--KQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQD 393
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
V VWN MI L +N GE+ ++ F M ESG PD TF +L+ CS
Sbjct: 394 VVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACS 440
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 177/411 (43%), Gaps = 34/411 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAG 61
+ A+ LFD+M ++D V+WN ++ Y K G + A+ L+ DM F++ V+
Sbjct: 145 VNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLIL 204
Query: 62 LMQSDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
++ +Q AK+V + V ++V +S++ Y G + A +F M +KD+ +W
Sbjct: 205 CVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAW 264
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
++ M+ A F +M ++ SW+ +++G R EA F KM
Sbjct: 265 TTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKM-----M 319
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW-------------KQLINGLVNSRRID 224
+ + Y + C+ + H + + + LI+ ++
Sbjct: 320 KFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLE 379
Query: 225 AAISYFKQMPETCE-KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGY 279
A+ F M + WN++IS L +NG ++A S + ++ ++
Sbjct: 380 ASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSAC 439
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG--LKFFVQMKESGPSPDNAT 337
G V ++ F+ MT + + + LG G ++ +++ PD+
Sbjct: 440 SHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRV 499
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
++++L +C ++LGR++ + I++ + Q + ++ ++YA G +S
Sbjct: 500 WSALLGVCRIHNNIELGRKVAERVIEL-KPQSSAAYVSLASLYAFLGKWES 549
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 296/547 (54%), Gaps = 25/547 (4%)
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
RDV N+++ Y ++ A VF M +DVVSW+ +I +L + D+A +EM
Sbjct: 127 RDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREM 186
Query: 141 GARDVASWTIMVNGLV---------REGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNG 190
V + + +V R G+ + A + + V ++ Y G
Sbjct: 187 NFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCG 246
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN---SIISV 247
+G+A LF + + + SW +I G + S R++ F +M E E + +++S+
Sbjct: 247 HLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQE--ENIFPNEITMLSL 304
Query: 248 LIRNG------LVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
++ G L K+ H+Y+ + +S ++A T ++ Y + ++ +A +F+ RDV
Sbjct: 305 IVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDV 364
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
+W M+ + + ++ F QM+ SG P T S+L++C+ LDLG+ +H+
Sbjct: 365 MIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSY 424
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
K ++ A++ MYA+CG+I +A F DI WN+II G A HGY E+A
Sbjct: 425 IDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEA 484
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L++F M KP+DITF+G+L ACS+AGLV +G+ F+ M + + L P+ HY C+VD
Sbjct: 485 LDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVD 544
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR GL+DEA + I++ I+ + VWGAL+ ACR+H N ++GE+A +++E+EP N
Sbjct: 545 LLGRAGLLDEAHEM---IKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPEN 601
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
G ++++ +Y + R DA + MK G+KKEPG S I++N H FL GD SHP+
Sbjct: 602 CGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQI 661
Query: 601 HRLRYLL 607
R+ +L
Sbjct: 662 RRINEML 668
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 209/473 (44%), Gaps = 38/473 (8%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
A ++ A+ +FDKM +RD V+W+ MIR +N D A+ L +M + + ++
Sbjct: 143 ACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMV 202
Query: 64 Q----SDNVQGAKEVF------DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+ N++ K + E V T +++ Y G + A ++F+G+ K
Sbjct: 203 NLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKT 262
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
VVSW +I + R++ F M ++ I + L+ E A +L ++ A
Sbjct: 263 VVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHA 322
Query: 174 ---KDVQAWNLMIAGYLDN---GCVGV--AEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
++ + +L +A L + C + A LF +RD+ W +++ + ID
Sbjct: 323 YILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQ 382
Query: 226 AISYFKQMPET----CEKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVG 278
A + F QM + + T S++S+ G L K HSY++K +V
Sbjct: 383 AFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVD 442
Query: 279 -YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + G++ +A ++F +RD+ +WN +I G + GEE L F +M+ G P++ T
Sbjct: 443 MYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDIT 502
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLE 392
F +L CS + G+++ + + + F V M+ + R G + A
Sbjct: 503 FIGLLHACSHAGLVTEGKKLFEKMV----HTFGLVPQIEHYGCMVDLLGRAGLLDEAHEM 558
Query: 393 FSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
S+PI + I W +++ H + L +L + +P++ + ++S
Sbjct: 559 IKSMPIKPNTIVWGALVAACRLHKNPQ--LGELAATQLLEIEPENCGYNVLMS 609
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 14/238 (5%)
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
SVL C + LG++IH +K ++ V NA++ MY C ++ A L F +
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR--- 456
D++SW+++I L+ + + ALEL M +P ++ V +++ + + G+
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 457 -YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
Y N++ P + T ++D+ + G + A L N + + W A++
Sbjct: 219 AYVIRNSNNEHMGVPTT---TALLDMYAKCGHLGLARQLFNGLTQKTV----VSWTAMIA 271
Query: 516 ACRIHNNIKVGEIAGERVME--LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
C N ++ G R+ E + PN + ++ E + G + K++ A + NG
Sbjct: 272 GCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFT-GALQLGKQLHAYILRNG 328
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 217/718 (30%), Positives = 331/718 (46%), Gaps = 129/718 (17%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTY-------- 55
+A +FDKM +R TWN MI G A+ L+ +M D FT+
Sbjct: 100 DAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACG 159
Query: 56 ---------------------------NTVIAGLMQSDNVQGAKEVFDG--MEVRDVVTW 86
N +IA + ++ GA+ +FD ME D V+W
Sbjct: 160 AFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSW 219
Query: 87 NSMISGYVCNGLIDEALRVF----------------------------------HGMPLK 112
NS+IS +V G EAL +F H + LK
Sbjct: 220 NSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILK 279
Query: 113 -----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
DV N +I NC +M+ AE FK M +D SW +++G+V+ +A
Sbjct: 280 SNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINH 339
Query: 168 FDKM--------------------------PAKDVQAW-------------NLMIAGYLD 188
F M +V A+ N +I Y
Sbjct: 340 FQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGK 399
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLV-NSRRIDAAISYFKQMPETCEKTWNSIISV 247
CV F+ M ++DL SW +I G N +DA K E + I S+
Sbjct: 400 CCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSI 459
Query: 248 LI------RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
L+ L+KE H Y+ K ++I ++ Y E+ V A VFE + ++D+
Sbjct: 460 LLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSKDIV 519
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
W MI N L E L+ F + E+ PD T SVL + L +L G++IH
Sbjct: 520 SWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFL 579
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
I+ ++N+++ MYARCG +++A F+ V D+I W S+I HG + A+
Sbjct: 580 IRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAI 639
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
+LF +M + PD ITF+ +L ACS++GLV +G+ +F+ MKN+Y L+P HY C+VDL
Sbjct: 640 DLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDL 699
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
L R ++EA + +R IE S VW ALLGACRIH+N +GE+A +++++L NS
Sbjct: 700 LARSNSLEEAYHF---VRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENS 756
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
G Y++++ + + GR D + + + MK N +KK+PGCSWI++ + H F++ D SHP+
Sbjct: 757 GNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQ 814
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 225/534 (42%), Gaps = 74/534 (13%)
Query: 97 GLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV 156
G +A++VF M + + +WN +IGA V+ R A +KEM V+ ++
Sbjct: 96 GSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVL 155
Query: 157 REGRIVEARKLFDKMPAKDVQA--------WNLMIAGYLDNGCVGVAEDLFQK--MHDRD 206
+ + R+L ++ V+ N +IA Y G +G A LF M D
Sbjct: 156 KACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDD 215
Query: 207 LTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKTWNSIISVL--------IRNGLVKEA 257
SW +I+ V A+S F++M E E + +S L I+ G +
Sbjct: 216 PVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIG--RGI 273
Query: 258 HSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
H+ L+ ++++ +I Y G++ A +VF+ M +D WN ++ G+ +ND+
Sbjct: 274 HAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMY 333
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
+ + F M++SG PD + +++ L G ++HA AIK + + N++
Sbjct: 334 SDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSL 393
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
I MY +C ++ F +P D+ISW +II G A + AL L +++L D
Sbjct: 394 IDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDP 453
Query: 437 ITFVGVLSACS----------------------------------YAGLVDQGRYYFDCM 462
+ +L ACS LVD R+ F+ +
Sbjct: 454 MMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESI 513
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
+K + S CV + GL EA+ L N + IE ++L A ++
Sbjct: 514 NSKDIVSWTSMITCCVHN-----GLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSS 568
Query: 523 IKVG-EIAGERVMELEPNNSGVYL------ILTEMYLSCGRREDAKRIFAQMKE 569
+K G EI G + G +L L +MY CG E+A+ IF +K+
Sbjct: 569 LKKGKEIHGFLI------RKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQ 616
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 90/186 (48%), Gaps = 2/186 (1%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T + Y + G A+KVF+ M+ R + WN MI E ++ + +M+ G S
Sbjct: 86 TKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVS 145
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
D TF VL C LG +IH A+K F V NA+I MYA+CG++ A +
Sbjct: 146 LDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVL 205
Query: 393 FSS--VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F S + D +SWNSII G + +AL LF RM+ + + TFV L AC
Sbjct: 206 FDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPT 265
Query: 451 LVDQGR 456
+ GR
Sbjct: 266 FIKIGR 271
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 113/279 (40%), Gaps = 54/279 (19%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV--SNAMITMYARCGNIQSAL 390
P ++ L +C+ L G+Q+HA +K +N +V + MY +CG+ A+
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLK-TQNYLDSVFLDTKFVHMYGKCGSFYDAV 102
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC---- 446
F + I +WN++I G +A+EL++ MR+ D TF VL AC
Sbjct: 103 KVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFK 162
Query: 447 ---------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID-------- 489
A G + F C A Y DL G L D
Sbjct: 163 ERRLGCEIHGVAVKCGYGGFVFVC-------NALIAMYAKCGDLGGARVLFDSGLMEKDD 215
Query: 490 ------------------EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
EA++L ++ G+E + + + L AC IK+G G
Sbjct: 216 PVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGR--GI 273
Query: 532 RVMELEPNN-SGVYL--ILTEMYLSCGRREDAKRIFAQM 567
+ L+ N+ + VY+ L MY +CG+ EDA+R+F M
Sbjct: 274 HAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSM 312
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 41/256 (16%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVI 59
A + A+++F+ + +D V+W MI NG A+ LFN + E D+ T +V+
Sbjct: 501 ALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVL 560
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+++ KE+ G +R + G + N L+D R
Sbjct: 561 YAAAALSSLKKGKEI-HGFLIRK----GFFLEGLIANSLVDMYAR--------------- 600
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
C M+ A + F + RD+ WT M+N G +A LF KM ++V
Sbjct: 601 -------CGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPD 653
Query: 180 NLMIAGYL----DNGCVGVAEDLFQKMHDR-DLTSWKQ----LINGLVNSRRIDAAISYF 230
++ L +G V + F+ M + L W + L++ L S ++ A +
Sbjct: 654 HITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFV 713
Query: 231 KQMP-ETCEKTWNSII 245
+ MP E + W +++
Sbjct: 714 RNMPIEPSAEVWCALL 729
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 22/198 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
R ++ A+N+F+ + QRD + W MI +G +A+ LF++M + D T+
Sbjct: 600 RCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLA 659
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
++ S V K+ F+ M ++ Y C + ++EA MP
Sbjct: 660 LLYACSHSGLVVEGKQHFEIM--KNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMP 717
Query: 111 LKDVVS-WNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGR---IVE 163
++ W ++GA DL E K ++ + ++ ++ N +GR + E
Sbjct: 718 IEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEE 777
Query: 164 ARKLF--DKMPAKDVQAW 179
R + +K+ K +W
Sbjct: 778 VRSIMKGNKLKKKPGCSW 795
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/623 (30%), Positives = 308/623 (49%), Gaps = 40/623 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTY----NTV 58
A+ +FD++P D +N +IR Y G A+ L+ M P + F + +
Sbjct: 52 ARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSA 111
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
+A L + A G+ D+ ++I Y+ A VF MP++DVV+WN
Sbjct: 112 LADLCAGRTIH-AHAAAVGLHT-DLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWN 169
Query: 119 LVIGALVNCQRMDLAESYFKEM----GARDVASWTIMV------NGLVREGRIVEARKLF 168
++ N A ++ +M G R AS + + +G + +G V A L
Sbjct: 170 AMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLR 229
Query: 169 DKMPAKDVQAW--NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ + Q ++ Y + A +F M R+ +W LI G V R+ A
Sbjct: 230 AYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEA 289
Query: 227 ISYFKQM--PETCEKTWNSIISVL--------IRNGLVKEAHSYLEKYP-YSNIASWTNV 275
+ FK M C + S+ S L +R G + H+ L K ++++ + ++
Sbjct: 290 FNLFKDMLVEGMCFLSATSVASALRVCASLADLRMG--TQLHALLAKSGIHADLTAGNSL 347
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ Y + G + A +F+ + +D + ++ G +N EE F +M+ PD
Sbjct: 348 LSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDI 407
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
AT S++ CS L L GR H I T++ N++I MYA+CG I + F
Sbjct: 408 ATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDK 467
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+P DI+SWN++I G HG ++A LF M+ F+PDD+TF+ +++ACS++GLV +G
Sbjct: 468 MPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEG 527
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
+++FD M +KY + PR HY C+VDLL R G +DEA + + ++ VWGALLG
Sbjct: 528 KHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMP---LKADVRVWGALLG 584
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
ACRIH NI +G+ + +L P +G +++L+ ++ + GR ++A + K G KK
Sbjct: 585 ACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKS 644
Query: 576 PGCSWIQINDGGHVFLSGDSSHP 598
PGCSWI+IN H F+ GD SHP
Sbjct: 645 PGCSWIEINGSLHAFVGGDQSHP 667
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 206/468 (44%), Gaps = 77/468 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYN-TVI 59
+R AR A N+F KMP RD V WN M+ GY +G +A+ M +R N + +
Sbjct: 145 IRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTL 204
Query: 60 AGLMQSDNVQGAKEVFDGMEVR-------------DVVTWNSMISGYV-CNGLIDEALRV 105
L+ GA +F G V V+ +++ Y C L+ A RV
Sbjct: 205 VSLLPLLAQHGA--LFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLV-YACRV 261
Query: 106 FHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM--------GARDVASWTIMVNGL-- 155
FHGM +++ V+W+ +IG V C RM A + FK+M A VAS + L
Sbjct: 262 FHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLAD 321
Query: 156 VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
+R G + A + A D+ A N +++ Y G + A LF ++ +D S+ L++
Sbjct: 322 LRMGTQLHALLAKSGIHA-DLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLS 380
Query: 216 GLVNSRRIDAAISYFKQMPETC--EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWT 273
G V + + + A FK+M + C + +++S++ A S+L + + +
Sbjct: 381 GYVQNGKAEEAFLVFKKM-QACNVQPDIATMVSLI-------PACSHLAALQHGRCSHGS 432
Query: 274 NVIVG--------------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+I G Y + G + + +VF+ M RD+ WN MI G G + LG+E
Sbjct: 433 VIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEA 492
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN----- 374
F+ MK G PD+ TF ++ CS H+ + ++ F T+++
Sbjct: 493 TTLFLSMKNQGFEPDDVTFICLIAACS-----------HSGLVTEGKHWFDTMTHKYGIL 541
Query: 375 -------AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYH 414
M+ + AR G + A S+P+ D+ W +++ H
Sbjct: 542 PRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIH 589
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/476 (19%), Positives = 188/476 (39%), Gaps = 79/476 (16%)
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
+D W + + G++ AR++FD++PA D +A+N +I Y G A DL++ M
Sbjct: 31 KDNKEWQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSM 90
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL-----IRNGLVKEA 257
YF+ P + T+ ++ + G A
Sbjct: 91 -------------------------LYFRVPPN--KYTFPFVLKACSALADLCAGRTIHA 123
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
H+ ++++ T +I Y G A VF M RDV WN M+ G + +
Sbjct: 124 HAAAVGL-HTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYH 182
Query: 318 EGLKFFVQMKESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ---FTTVS 373
+ + M++ G P+ +T S+L + + L G +HA ++ +Q +
Sbjct: 183 HAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIG 242
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM------ 427
A++ MYA+C ++ A F + + + ++W+++I G +A LF+ M
Sbjct: 243 TALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMC 302
Query: 428 ---------------RLTDFK---------------PDDITFVGVLSACSYAGLVDQGRY 457
L D + D +LS + AGL+++
Sbjct: 303 FLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATM 362
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
FD + K + Y ++ + G +EA + +++A ++ +L+ AC
Sbjct: 363 LFDEIAIK-----DTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPAC 417
Query: 518 RIHNNIKVGEIA-GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
++ G + G ++ + + L +MY CGR + ++++F +M +
Sbjct: 418 SHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDI 473
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 198/663 (29%), Positives = 320/663 (48%), Gaps = 76/663 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTY- 55
+R A +F KMP+RD +WNVM+ GY K G L+ A+ L+++M D++T+
Sbjct: 140 VRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFP 199
Query: 56 ----------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVR 81
N ++ + +V A++VFD M V
Sbjct: 200 CVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVM 259
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAE-SYFKEM 140
D ++WN+MI+G+ NG + L +F M L+D V NL+ V L++ ++ KEM
Sbjct: 260 DCISWNAMIAGHFENGECNAGLELFLTM-LQDEVQPNLMTITSVTVASGLLSDITFAKEM 318
Query: 141 G--------ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A DVA ++ G + +AR +F +M +D +W MI+GY NG
Sbjct: 319 HGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFP 378
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A +++ M +++ I + + ++ ++ E E + V++ N
Sbjct: 379 DKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESK-GFMSYVVVTNA 437
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
L LE Y S + AI+VF+ M +DV W+ MI G
Sbjct: 438 L-------LEMYAKSK---------------RIDKAIEVFKCMPEKDVVSWSSMIAGFCF 475
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N E L +F M + P++ TF + L C+ L G++IHA ++ +
Sbjct: 476 NHRNFEALYYFRHML-ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYL 534
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
NA+I +Y +CG A +F + D++SWN +I G HG E AL F +M
Sbjct: 535 PNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGE 594
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
PD++TFV +L ACS G+V +G F M +KY + P HY C+VDLL R G + EA
Sbjct: 595 CPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAY 654
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
N +NE+ I VWGALL CRIH ++++GE+A + V+ELEPN++G +++L ++Y
Sbjct: 655 NFINEMP---ITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYA 711
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
G + R+ M+E G+ + GCSW+++ H FL+ D SHP+ + +L ++
Sbjct: 712 DAGIWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYE 771
Query: 613 EIE 615
++
Sbjct: 772 RMK 774
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 188/400 (47%), Gaps = 46/400 (11%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PL 111
N +++ L++ A VF M RDV +WN M+ GY GL++EAL ++H M
Sbjct: 133 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVR 192
Query: 112 KDVVSWNLVI---GALVNCQRMDLAESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKL 167
DV ++ V+ G + + + ++ G A +V ++ + G +V ARK+
Sbjct: 193 PDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKV 252
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
FD M D +WN MIAG+ +NG +LF M
Sbjct: 253 FDSMAVMDCISWNAMIAGHFENGECNAGLELFLTM------------------------- 287
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLV------KEAHSYLEKYPYSNIASWTNVIVG-YF 280
+ + + +I SV + +GL+ KE H K ++ ++ N ++ Y
Sbjct: 288 -----LQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYA 342
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+G +G A VF M TRD W MI G +N ++ L+ + M+ + SPD+ T S
Sbjct: 343 SLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIAS 402
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
L C+ L +LD+G ++H A + V+NA++ MYA+ I A+ F +P D
Sbjct: 403 ALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKD 462
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
++SW+S+I G ++ +AL F M L D KP+ +TF+
Sbjct: 463 VVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFI 501
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
++ S PD + ++ +C ++ G + A A + NAM++M R G
Sbjct: 85 LESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGE 144
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
A F+ +P D+ SWN ++ G G E+AL+L+ RM +PD TF VL +
Sbjct: 145 TWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRS 204
Query: 446 C 446
C
Sbjct: 205 C 205
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 195/604 (32%), Positives = 312/604 (51%), Gaps = 55/604 (9%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGA 71
+ K ++ N ++ Y K G L++A +F +M +RD T+NT+I +Q +N A
Sbjct: 454 IIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEA 513
Query: 72 KEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMD 131
++F M + +V+ + ++ + +A HG L G V+C +
Sbjct: 514 FDLFKRMNLCGIVSDGACLASTL------KACTHVHG----------LYQGKQVHCLSVK 557
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
RD+ + + +++ + G I +ARK+F +P V + N +IAGY N
Sbjct: 558 CGLD-------RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN- 609
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN 251
+ A LFQ+M R VN I F + E C K + +
Sbjct: 610 LEEAVVLFQEMLTRG-----------VNPSEIT-----FATIVEACHKPESLTLGT---- 649
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVG--SAIKVF-ELMTTRDVTVWNVMIF 308
+ H + K +S+ + + + M G A +F EL + + + +W M+
Sbjct: 650 ----QFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMS 705
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
G +N EE LKF+ +M+ G PD ATF +VL +CS L +L GR IH+ +A +
Sbjct: 706 GHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL 765
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERM 427
SN +I MYA+CG+++ + F + +++SWNS+I G A +GYAE AL++F+ M
Sbjct: 766 DELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM 825
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
R + PD+ITF+GVL+ACS+AG V GR F+ M +Y ++ R H C+VDLLGR+G
Sbjct: 826 RQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGY 885
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLIL 547
+ EA + I A ++ +W +LLGACRIH + GEI+ E+++ELEP NS Y++L
Sbjct: 886 LQEADDF---IEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLL 942
Query: 548 TEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
+ +Y S G E A + M++ GVKK PG SWI + H+F +GD SH + ++ L
Sbjct: 943 SNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFL 1002
Query: 608 NLLH 611
L+
Sbjct: 1003 EDLY 1006
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 161/658 (24%), Positives = 285/658 (43%), Gaps = 114/658 (17%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNV--------MIRGYFKNGFLDNAMCLFNQMPERDMFT 54
++ +++ +FD+MPQR + + +I G G L NA+ D++
Sbjct: 55 QCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIV--------DLYA 106
Query: 55 YNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALR----VFHGMP 110
+ V A++ FD +E +DV WNSM+S Y G + LR +F
Sbjct: 107 ---------KCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQI 156
Query: 111 LKDVVSWNLVI-------------------------------GALVN----CQRMDLAES 135
+ ++++V+ GALV+ C R+ A
Sbjct: 157 FPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARR 216
Query: 136 YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK----DVQAWNLMIAGYLDNGC 191
F+ + + WT + +G V+ G EA +F++M + D A+ +I Y+ G
Sbjct: 217 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK 276
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII-SVLIR 250
+ A LF +M D+ +W +I+G AI YF M ++ K+ S + SVL
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 251 NGLVKE------AHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
G+V H+ K SNI ++++ Y + ++ +A KVFE + ++ W
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW 396
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI- 362
N MI G N + ++ F+ MK SG + D+ TFTS+L+ C+ L++G Q H+ I
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Query: 363 -KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
K+A+N F V NA++ MYA+CG ++ A F + D ++WN+II +A
Sbjct: 457 KKLAKNLF--VGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAF 514
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
+LF+RM L D L AC++ + QG+ C+ K L + ++D+
Sbjct: 515 DLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK-QVHCLSVKCGLDRDLHTGSSLIDM 573
Query: 482 LGRFGLI------------------------------DEAMNLLNEIRADGIEVSPTVWG 511
+ G+I +EA+ L E+ G+ S +
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFA 633
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQM 567
++ AC ++ +G ++ + ++ G YL L MY++ +A +F+++
Sbjct: 634 TIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL 691
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/506 (22%), Positives = 216/506 (42%), Gaps = 75/506 (14%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R ++++A+ LF +M D V WNVMI G+ K G A+ F M + + + + +
Sbjct: 272 IRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLG 331
Query: 61 GLMQS---------------------------------------DNVQGAKEVFDGMEVR 81
++ + + ++ A +VF+ +E +
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK 391
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYF 137
+ V WN+MI GY NG + + +F M D ++ ++ +++ +
Sbjct: 392 NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFH 451
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ + +A + N LV + G + +AR++F++M +D WN +I Y+ +
Sbjct: 452 SIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENES 511
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A DLF++M+ + S + + + + KQ + + ++ GL
Sbjct: 512 EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ-----------VHCLSVKCGL 560
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
++ H + +++I Y + G + A KVF + V N +I G +N
Sbjct: 561 DRDLH------------TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN 608
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK---IARNQFT 370
+L EE + F +M G +P TF +++ C +L LG Q H Q K + ++
Sbjct: 609 NL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYL 667
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
+S + M +R AL S P I+ W ++ G + +G+ E+AL+ ++ MR
Sbjct: 668 GISLLGMYMNSRGMTEACALFSELSSP-KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD 726
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGR 456
PD TFV VL CS + +GR
Sbjct: 727 GVLPDQATFVTVLRVCSVLSSLREGR 752
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 12/301 (3%)
Query: 274 NVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG--LKFFVQMKESG 330
N IV Y + +V A K F+ + +DVT WN M+ + +G+ G L+ FV + E+
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMY--SSIGKPGKVLRSFVSLFENQ 155
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
P+ TF+ VL+ C+ ++ GRQIH IK+ + + A++ MYA+C I A
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR 215
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F + + + W + G G E+A+ +FERMR +PD + FV V++ G
Sbjct: 216 RVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLG 275
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
+ R F M + P + ++ G+ G A+ +R ++ + +
Sbjct: 276 KLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330
Query: 511 GALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
G++L A I N+ +G + ++L +N V L MY C + E A ++F ++E
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 570 N 570
Sbjct: 391 K 391
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 101/231 (43%), Gaps = 21/231 (9%)
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
L +G+ +H++++ + + + NA++ +YA+C + A +F + D+ +WNS++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
+ G K L F + P+ TF VLS C+ V+ GR C K L+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGR-QIHCSMIKMGLE 192
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
S +VD+ + I +A + I ++ + W C +K G +
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI----VDPNTVCW-----TCLFSGYVKAG-LP 242
Query: 530 GERVMELE--------PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
E V+ E P++ ++ + Y+ G+ +DA+ +F +M V
Sbjct: 243 EEAVLVFERMRDEGHRPDHLA-FVTVINTYIRLGKLKDARLLFGEMSSPDV 292
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 89/190 (46%), Gaps = 22/190 (11%)
Query: 6 IQEAQNLFDKMPQR-DTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIA 60
++ + +FD+M +R + V+WN +I GY KNG+ ++A+ +F+ M + D T+ V+
Sbjct: 783 MKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLT 842
Query: 61 GLMQSDNVQGAKEVFD------GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-D 113
+ V +++F+ G+E R V M+ G + EA LK D
Sbjct: 843 ACSHAGKVSDGRKIFEMMIGQYGIEAR-VDHVACMVDLLGRWGYLQEADDFIEAQNLKPD 901
Query: 114 VVSWNLVIGALVNCQ------RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
W+ ++GA C+ R +++ E+ ++ +++ ++ N +G +A L
Sbjct: 902 ARLWSSLLGA---CRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANAL 958
Query: 168 FDKMPAKDVQ 177
M + V+
Sbjct: 959 RKVMRDRGVK 968
>gi|345505232|gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila]
Length = 579
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/534 (34%), Positives = 285/534 (53%), Gaps = 29/534 (5%)
Query: 77 GMEVRDVVTWNSMISGYVCNGLIDEALRVFH-----GMPLKDVVSWNLVIGALVNCQRMD 131
G EV D WN+MI + AL +F G+P+ D S +LV+ A C R+
Sbjct: 46 GGEVEDPYLWNAMIKSHSHGTDPRRALLLFCLMLEIGVPV-DKFSLSLVMKA---CSRLG 101
Query: 132 LAES------YFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
+ + K+ G D+ ++ ++ G + AR++FD+MP +D ++N MI
Sbjct: 102 FVKGGLQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMID 161
Query: 185 GYLDNGCVGVAEDLFQKMHD--RDLTSWKQLINGLVN-SRRIDAAISYFKQMPETCEKTW 241
GY+ G + A +LF M ++L SW LI+G S +D A F +MPE +W
Sbjct: 162 GYVKCGSIESASELFDLMPREMKNLISWNSLISGYAQTSEGVDIASKLFAEMPEKDLISW 221
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
NS+I +++G +++A + P ++ +W +I GY ++G V A +F+ M RDV
Sbjct: 222 NSMIDGYVKHGRIEDAKDLFDMVPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVV 281
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
+N M+ G +N E L+ F M KES SPD T VL+ + L L +H
Sbjct: 282 AYNSMMAGYVQNRFHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMH-- 339
Query: 361 AIKIARNQFT---TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
+ I QF + A+I MY++CG+IQ A+L F + I WN++I GLA HG
Sbjct: 340 -LYIVEKQFLLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLG 398
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
E A ++ ++ KPDDITFVGVL+ACS++GLV +G F+ M+ K+ ++PR HY C
Sbjct: 399 ESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGC 458
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
+VD+L R G I+ A NL+ E+ IE + +W L AC H + GE+ + ++
Sbjct: 459 MVDILSRSGSIELAKNLIEEM---PIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQA 515
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
N Y++L+ MY S G +D +R+ MKE ++K PGCSWI+++ H F
Sbjct: 516 DYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGXVHEFF 569
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 220/452 (48%), Gaps = 33/452 (7%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGLMQSDNVQGAKEVF 75
D + +++++ + GF+ + + + + D+F N +I ++ + A+++F
Sbjct: 86 DKFSLSLVMKACSRLGFVKGGLQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGFARQIF 145
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWN-LVIGALVNCQRMDL 132
D M RD V++NSMI GYV G I+ A +F MP +K+++SWN L+ G + +D+
Sbjct: 146 DRMPQRDSVSYNSMIDGYVKCGSIESASELFDLMPREMKNLISWNSLISGYAQTSEGVDI 205
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A F EM +D+ SW M++G V+ GRI +A+ LFD +P +DV W MI GY G V
Sbjct: 206 ASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDMVPRRDVVTWATMIDGYAKLGFV 265
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSIISV 247
A+ LF +M RD+ ++ ++ G V +R A+ F M + E T ++S
Sbjct: 266 HQAKTLFDQMPHRDVVAYNSMMAGYVQNRFHMEALEIFSDMEKESHLSPDETTLVIVLSA 325
Query: 248 LIRNGLVKEA---HSYL-EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+ + G + +A H Y+ EK +I Y + G + A+ VFE + + + W
Sbjct: 326 IAQLGRLSKAMDMHLYIVEKQFLLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHW 385
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLGRQ 356
N MI GL + LGE +Q++ PD+ TF VL CS L +L R+
Sbjct: 386 NAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMRR 445
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYH 414
H ++ M+ + +R G+I+ A L+E + +D+I W + + ++H
Sbjct: 446 KHKIEPRLQH------YGCMVDILSRSGSIELAKNLIEEMPIEPNDVI-WRTFLTACSHH 498
Query: 415 GYAEKALELFERMRL-TDFKPDDITFVGVLSA 445
E + + + L D+ P + + A
Sbjct: 499 KEFETGELVAKHLILQADYNPSSYVLLSNMYA 530
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 192/397 (48%), Gaps = 25/397 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTVIAGLMQ-S 65
A+ +FD+MPQRD+V++N MI GY K G +++A LF+ MP +++ ++N++I+G Q S
Sbjct: 141 ARQIFDRMPQRDSVSYNSMIDGYVKCGSIESASELFDLMPREMKNLISWNSLISGYAQTS 200
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
+ V A ++F M +D+++WNSMI GYV +G I++A +F +P +DVV+W +I
Sbjct: 201 EGVDIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDMVPRRDVVTWATMIDGYA 260
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP-----AKDVQAWN 180
+ A++ F +M RDV ++ M+ G V+ +EA ++F M + D
Sbjct: 261 KLGFVHQAKTLFDQMPHRDVVAYNSMMAGYVQNRFHMEALEIFSDMEKESHLSPDETTLV 320
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN----SRRIDAAISYFKQMPET 236
++++ G + A D+ + ++ +L L++ I A+ F+ +
Sbjct: 321 IVLSAIAQLGRLSKAMDMHLYIVEKQFLLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK 380
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYFEMGEVGSAIKVF 292
WN++I L +GL + A L + +I ++ V+ G V + F
Sbjct: 381 SIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCF 440
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEG-LKFFVQMKESGP-SPDNATFTSVLTICSDLPT 350
ELM + + +G + L G ++ + E P P++ + + LT CS
Sbjct: 441 ELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKE 500
Query: 351 LDLGRQIHAQAIKIA---RNQFTTVSNAMITMYARCG 384
+ G + I A + + +SN MYA G
Sbjct: 501 FETGELVAKHLILQADYNPSSYVLLSN----MYASFG 533
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/541 (33%), Positives = 286/541 (52%), Gaps = 39/541 (7%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYF 137
+V +N++ISG++ NG +E + M + D ++ I A ++ +
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIKKIHGLL 162
Query: 138 KEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
+ G DV + +VN ++ G + A+ F+++P +DV WN M+ GY G +
Sbjct: 163 FKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVL 222
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
+ F++M+D + + + G +S F M + + NG +
Sbjct: 223 ETFRRMNDESVVPSRFTVTG---------XLSVFAVMGD-------------LNNGRI-- 258
Query: 257 AHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
H + K Y S +A ++I Y + + A+++FE+M +D+ WN ++ +
Sbjct: 259 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGD 318
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ------F 369
+ L+ +M +G PD T T+VL CS L L GR+IH I +
Sbjct: 319 HDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD 378
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
+ NA+I MYA+CG+++ A L F + D+ SWN +I G HGY +ALE+F RM
Sbjct: 379 VLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCE 438
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
KPD++TFVGVLSACS+AG V QGR + MK+KY + P HYTCV+D+LGR G +D
Sbjct: 439 VQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLD 498
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
EA L + IE +P VW ALL ACR+H + + E+A +RV ELEP + G Y++++
Sbjct: 499 EAYELALTMP---IEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSN 555
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNL 609
+Y + GR E+ + M++ V+K PGCSWI++ +G HVF+S D +HP+ + LN
Sbjct: 556 VYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNS 615
Query: 610 L 610
L
Sbjct: 616 L 616
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 11/245 (4%)
Query: 265 PYSNIASWTNVIVGYFEMGEV---GSAIKVFELMTTRDVTVW--NVMIFGLGENDLGEEG 319
P A + +V F E+ + +K E T ++ V+ N +I G N EEG
Sbjct: 64 PLGRAAGFLETLVSSFVQLEIELPSNTLKAGENDPTHEINVFAFNAIISGFITNGFPEEG 123
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
+F+ +M+ G PD TF + C D+ + ++IH K + +A++
Sbjct: 124 FEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNC 180
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y + G ++ A + F +PI D++ WN+++ G A G E LE F RM P T
Sbjct: 181 YLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTV 240
Query: 440 VGVLSACSYAGLVDQGRYYFD-CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
G LS + G ++ GR MK Y A ++D+ G+ I++A+ + +
Sbjct: 241 TGXLSVFAVMGDLNNGRIIHGFAMKMGY--DSGVAVSNSLIDMYGKCKCIEDALEIFEMM 298
Query: 499 RADGI 503
R I
Sbjct: 299 REKDI 303
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 177/437 (40%), Gaps = 66/437 (15%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGA 71
LF + D + ++ Y K G +++A F ++P RD+ +N ++ G Q +
Sbjct: 162 LFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMV 221
Query: 72 KEVFDGMEVRDVV----TWNSMISGYVCNGLIDEALRVFHGMPLK-----DVVSWNLVIG 122
E F M VV T +S + G ++ R+ HG +K V N +I
Sbjct: 222 LETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNG-RIIHGFAMKMGYDSGVAVSNSLID 280
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
C+ ++ A F+ M +D+ SW +V+ + G +L D+M +Q +L+
Sbjct: 281 MYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQP-DLV 339
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL-VNSRRIDAAISYFKQMPETCEKTW 241
+ C L MH R++ + +++GL + + ID +
Sbjct: 340 TVTTVLPAC----SHLAALMHGREIHGY-MIVSGLGKDGKDIDDVL------------LK 382
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N++I + + G +++AH E+ ++ASW +I+GY
Sbjct: 383 NAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGY---------------------- 420
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
G + G E L+ F +M E PD TF VL+ CS + GR Q
Sbjct: 421 ---------GMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQ- 470
Query: 362 IKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAE 418
+K + T+ + +I M R G + A ++PI + + W +++ H +A
Sbjct: 471 MKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHA- 529
Query: 419 KALELFERMRLTDFKPD 435
L R+ + +P+
Sbjct: 530 -VLAEVAAQRVFELEPE 545
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 138/337 (40%), Gaps = 38/337 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ AQ F+++P RD V WN M+ GY + G + + F +M + + + G +
Sbjct: 187 MEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSV 246
Query: 66 DNVQG---AKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
V G + G ++ V NS+I Y I++AL +F M KD+ SW
Sbjct: 247 FAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSW 306
Query: 118 NLVIGALVNCQRMDLAESYFKEM-GA---RDVASWTIMVNGLVREGRIVEARKLF----- 168
N ++ C D M GA D+ + T ++ ++ R++
Sbjct: 307 NSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIV 366
Query: 169 -----DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
D DV N +I Y G + A +F++M ++D+ SW +I G
Sbjct: 367 SGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYG 426
Query: 224 DAAISYFKQMPETC----EKTWNSIISVLIRNGLVKEAHSYL----EKYPYS-NIASWTN 274
+ A+ F +M E E T+ ++S G V + ++L KY + I +T
Sbjct: 427 NEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTC 486
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDV----TVWNVMI 307
VI +G G + +EL T + VW ++
Sbjct: 487 VID---MLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAG 61
+++A +F++M +D +WN+MI GY +G+ + A+ +F++M E D T+ V++
Sbjct: 395 MRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSA 454
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLK-D 113
+ V + M+ + V I Y C G +DEA + MP++ +
Sbjct: 455 CSHAGFVSQGRNFLVQMKSKYDVA--PTIEHYTCVIDMLGRAGQLDEAYELALTMPIEAN 512
Query: 114 VVSWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
V W ++ A + LAE + E+ S+ +M N GR E ++
Sbjct: 513 PVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHT 572
Query: 171 MPAKDVQ 177
M ++V+
Sbjct: 573 MRQQNVR 579
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/505 (33%), Positives = 273/505 (54%), Gaps = 28/505 (5%)
Query: 128 QRMDLAESYFKEMGA------RDVASWTIMVNGLVREGR--------IVEARKLFDKMPA 173
+R DLA + E A + A + ++ G R R + +AR LFD++P
Sbjct: 20 RRGDLAGAAEPEAVASTTPQRKTTADYNRLLAGYARAARPGGRRDRLLADARHLFDRIPR 79
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD--RDLTSWKQLINGLVNSRRIDAAISYFK 231
D ++N +++ + G V A DLF M R++TSW +++GL S + A + F
Sbjct: 80 PDAVSYNTLLSCHFAAGDVRGARDLFAAMPATARNVTSWNTMLSGLSRSGAVGEARAVFL 139
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYP-YSNIASWTNVIVGYFEMGEVGSAIK 290
MP +WN+++S G + A E P N WT ++ GY + G V A++
Sbjct: 140 AMPARNSISWNAMVSCFAHAGDMCAAEECFEDAPDKENAVLWTAMVSGYMDSGHVEKAMQ 199
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLP 349
FE M R + WN ++ G +N E+ L F M +++ P+ +T +SVL CS+L
Sbjct: 200 FFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLS 259
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
L GRQ+H K+ ++ T ++++MY +CG++ A FS + I D+I+WN++I
Sbjct: 260 ALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMIS 319
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
G A+HG +A+ELFE+M+ +P+ ITFV VL+AC + G+ D G F+ M+ Y ++
Sbjct: 320 GYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIE 379
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
R HY+C+VDLL R G ++ A++L IR+ + P+ +G LL A R++ N++ E A
Sbjct: 380 ARVDHYSCMVDLLCRAGSLERAVSL---IRSMPFQPHPSAYGTLLNASRVYKNMEFAEFA 436
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
+++E P N+G Y+ L +Y + D R+ MK+N V K PG SW++IN HV
Sbjct: 437 AGKLIEQNPQNAGAYVQLANIYAVANQWADVSRVRRWMKDNAVVKTPGYSWVEINGVIHV 496
Query: 590 FLSGDSSHPKFHRLRYLLNLLHTEI 614
F S D HP+ L+L+H +
Sbjct: 497 FRSNDRLHPQ-------LSLIHERL 514
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 168/374 (44%), Gaps = 58/374 (15%)
Query: 81 RDVVTWNSMISGYVCNG--------LIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDL 132
+ +N +++GY L+ +A +F +P D VS+N ++ +
Sbjct: 41 KTTADYNRLLAGYARAARPGGRRDRLLADARHLFDRIPRPDAVSYNTLLSCHFAAGDVRG 100
Query: 133 AESYFKEM--GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
A F M AR+V SW M++GL R G + EAR +F MPA++ +WN M++ + G
Sbjct: 101 ARDLFAAMPATARNVTSWNTMLSGLSRSGAVGEARAVFLAMPARNSISWNAMVSCFAHAG 160
Query: 191 CVGVAEDLFQKMHDRD-LTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI 249
+ AE+ F+ D++ W +++G ++S ++ A+ +F+ MP +WN++++ +
Sbjct: 161 DMCAAEECFEDAPDKENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYV 220
Query: 250 RN---------------------------------------GLVKEAHSYLEKYPYS-NI 269
+N G ++ H + K P S +
Sbjct: 221 KNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRV 280
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
+ T+++ Y + G++ A K+F M RDV WN MI G + G E ++ F +MK
Sbjct: 281 TAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQ 340
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI----ARNQFTTVSNAMITMYARCGN 385
G P+ TF +VLT C D G Q + ++ AR + M+ + R G+
Sbjct: 341 GVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSC---MVDLLCRAGS 397
Query: 386 IQSALLEFSSVPIH 399
++ A+ S+P
Sbjct: 398 LERAVSLIRSMPFQ 411
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 148/313 (47%), Gaps = 52/313 (16%)
Query: 6 IQEAQNLFDKMPQ--RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
++ A++LF MP R+ +WN M+ G ++G + A +F MP R+ ++N +++
Sbjct: 98 VRGARDLFAAMPATARNVTSWNTMLSGLSRSGAVGEARAVFLAMPARNSISWNAMVSCFA 157
Query: 64 QSDNVQGAKEVF-DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
+ ++ A+E F D + + V W +M+SGY+ +G +++A++ F MP++ +VSWN V+
Sbjct: 158 HAGDMCAAEECFEDAPDKENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVA 217
Query: 123 ALVNCQRMDLAESYFKEMG----------------------------------------A 142
V R + A FK M +
Sbjct: 218 GYVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLS 277
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
R V + T +V+ + G + A KLF +M +DV AWN MI+GY +G A +LF+KM
Sbjct: 278 RRVTAGTSLVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKM 337
Query: 203 HDRDL----TSWKQLINGLVNSRRIDAAISYFKQMPETCE-----KTWNSIISVLIRNGL 253
+ + ++ ++ +++ D + F++M E ++ ++ +L R G
Sbjct: 338 KSQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGS 397
Query: 254 VKEAHSYLEKYPY 266
++ A S + P+
Sbjct: 398 LERAVSLIRSMPF 410
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 51/222 (22%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----------- 49
M + +++A F+ MP R V+WN ++ GY KN ++A+ +F M
Sbjct: 189 MDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRDADVRPNESTL 248
Query: 50 -----------------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
R + ++++ + ++ GA ++F M +
Sbjct: 249 SSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEMRI 308
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESY 136
RDV+ WN+MISGY +G EA+ +F M + V +++ V+ A ++ D
Sbjct: 309 RDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFVAVLTACIHTGMCDFGMQC 368
Query: 137 FKEMG------ARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
F+ M AR V ++ MV+ L R G + A L MP
Sbjct: 369 FERMQEVYGIEAR-VDHYSCMVDLLCRAGSLERAVSLIRSMP 409
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 204/691 (29%), Positives = 337/691 (48%), Gaps = 93/691 (13%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAM---CLF-------------------NQMP- 48
+ +++ V WN++IR + K G LD+A+ C ++P
Sbjct: 111 VLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPS 170
Query: 49 ----------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR---DVVTWNSM 89
E ++F N ++A + +++ A +FD + R DV++WNS+
Sbjct: 171 YRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSI 230
Query: 90 ISGYVCNGLIDEALRVFHGMPL----------KDVVSWNLVIGALVNC-------QRMDL 132
+S +V + AL +F M L D++S ++ L C Q ++
Sbjct: 231 VSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS---IVNILPACGSLKAVPQTKEV 287
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
+ + DV +++ + G + A K+F+ M KDV +WN M+AGY +G
Sbjct: 288 HGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNF 347
Query: 193 GVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCE-KTWNSIISV 247
A +LF+ M D+ +W +I G A++ F+QM + +IISV
Sbjct: 348 EAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISV 407
Query: 248 LIRNGLVKEAHSYLEKYPYS-----------------NIASWTNVIVGYFEMGEVGSAIK 290
L + E + YS ++ + +I Y + +A
Sbjct: 408 LSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARS 467
Query: 291 VFE--LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM--KESGPSPDNATFTSVLTICS 346
+F+ + R+V W VMI G + + LK FV+M + G +P+ T + +L C+
Sbjct: 468 IFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACA 527
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTT--VSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
L + +G+QIHA ++ R + + V+N +I MY++CG++ +A F S+ ISW
Sbjct: 528 HLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISW 587
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
S++ G HG +AL++F++MR F PDDITF+ VL ACS+ G+VDQG YFD M
Sbjct: 588 TSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSA 647
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
Y L PR+ HY C +DLL R G +D+A + ++ +E + VW ALL ACR+H+N++
Sbjct: 648 DYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMP---MEPTAVVWVALLSACRVHSNVE 704
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIN 584
+ E A +++E+ N G Y +++ +Y + GR +D RI MK++G+KK PGCSW+Q
Sbjct: 705 LAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQ 764
Query: 585 DGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
G F GD SHP ++ LL L I+
Sbjct: 765 KGTASFFVGDRSHPLSPQIYALLESLIDRIK 795
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 124/529 (23%), Positives = 229/529 (43%), Gaps = 66/529 (12%)
Query: 47 MPERDMFTYNTVIAGLMQSDNVQGAKE----VFDGMEVRDVVTWNSMISGYVCNGLIDEA 102
+P + ++ G++ S GA + V + + V WN +I ++ G +D A
Sbjct: 80 LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 139
Query: 103 L----RVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV-- 156
+ R+ D + V+ A ++ + S + N LV
Sbjct: 140 INVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAM 199
Query: 157 --REGRIVEARKLFDKMPAK---DVQAWNLMIAGYLDNGCVGVAEDLFQKM----HDRDL 207
R G + EA +FD++ + DV +WN +++ ++ + A DLF KM H++
Sbjct: 200 YSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPT 259
Query: 208 TSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI--------------ISVLIRNGL 253
+I+ +VN I A K +P+T E N+I I + GL
Sbjct: 260 NERSDIIS-IVN---ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGL 315
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR----DVTVWNVMIFG 309
++ A + ++ SW ++ GY + G +A ++F+ M DV W +I G
Sbjct: 316 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAG 375
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK----IA 365
+ E L F QM SG P+ T SVL+ C+ L G +IHA ++K
Sbjct: 376 YSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTL 435
Query: 366 RNQF------TTVSNAMITMYARCGNIQSALLEFSSVPIHD--IISWNSIICGLAYHGYA 417
N F V NA+I MY++C + ++A F +P+ + +++W +I G A +G +
Sbjct: 436 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 495
Query: 418 EKALELFERMRLTDF--KPDDITFVGVLSACSYAGLVDQGR--YYFDCMKNKYFLQPRSA 473
AL+LF M + P+ T +L AC++ + G+ + + ++Y SA
Sbjct: 496 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRY---ESSA 552
Query: 474 HYT--CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
++ C++D+ + G +D A ++ + + + S W +++ +H
Sbjct: 553 YFVANCLIDMYSKCGDVDTARHVFDSMS----QKSAISWTSMMTGYGMH 597
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 137/320 (42%), Gaps = 25/320 (7%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T V+ Y G A+ V E +T WN++I + + + +M +G
Sbjct: 93 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 152
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMYARCGNIQSA 389
PD+ T VL C +LP+ G H I N F + + NA++ MY+RCG+++ A
Sbjct: 153 PDHFTLPHVLKACGELPSYRCGSAFHGL---ICCNGFESNVFICNALVAMYSRCGSLEEA 209
Query: 390 LLEFSSVP---IHDIISWNSIICGLAYHGYAEKALELFERMRL------TDFKPDDITFV 440
+ F + I D+ISWNSI+ A AL+LF +M L T+ + D I+ V
Sbjct: 210 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 269
Query: 441 GVLSACSYAGLVDQGR-YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+L AC V Q + + + ++N F P ++D + GL++ A+ + N +
Sbjct: 270 NILPACGSLKAVPQTKEVHGNAIRNGTF--PDVFVGNALIDAYAKCGLMENAVKVFNMME 327
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
+ W A++ N + E+ E P + + + Y G
Sbjct: 328 FKDV----VSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 383
Query: 559 DAKRIFAQMKENGVKKEPGC 578
+A +F QM +G P C
Sbjct: 384 EALNLFRQMIFSG--SLPNC 401
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 173/449 (38%), Gaps = 78/449 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
++ A +F+ M +D V+WN M+ GY ++G + A LF M + D+ T+ VIAG
Sbjct: 316 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAG 375
Query: 62 LMQSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----- 112
Q A +F M + + VT S++S G + + H LK
Sbjct: 376 YSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEI-HAYSLKNCLLT 434
Query: 113 ----------DVVSWNLVIGALVNCQRMDLAESYFKE--MGARDVASWTIMVNGLVREGR 160
D++ +N +I C+ A S F + + R+V +WT+M+ G + G
Sbjct: 435 LDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD 494
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+A KLF +M + + + + Y + C+ L H + KQ+ ++
Sbjct: 495 SNDALKLFVEMIS---EPYGVAPNAYTIS-CI-----LMACAHLAAIRIGKQIHAYVLRH 545
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
R +++ +YF N +I + + G V A + + SWT+++ GY
Sbjct: 546 HRYESS-AYF---------VANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGY- 594
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
G + G E L F +M+++G PD+ TF
Sbjct: 595 ------------------------------GMHGRGSEALDIFDKMRKAGFVPDDITFLV 624
Query: 341 VLTICSDLPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
VL CS +D G + + I + AR G + A +P+
Sbjct: 625 VLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPME 684
Query: 400 DI-ISWNSIICGLAYHGYAEKALELFERM 427
+ W +++ H E A ++
Sbjct: 685 PTAVVWVALLSACRVHSNVELAEHALNKL 713
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 20/183 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+ A+++FD M Q+ ++W M+ GY +G A+ +F++M + D T+ V+
Sbjct: 569 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 628
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLKDV 114
V FD M +T + Y C +G +D+A R MP++
Sbjct: 629 CSHCGMVDQGLSYFDSMSADYGLTPRA--EHYACAIDLLARSGRLDKAWRTVKDMPMEPT 686
Query: 115 -VSWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGR---IVEARKL 167
V W ++ A ++LAE EM A + S+T++ N GR + R L
Sbjct: 687 AVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHL 746
Query: 168 FDK 170
K
Sbjct: 747 MKK 749
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 185/587 (31%), Positives = 308/587 (52%), Gaps = 63/587 (10%)
Query: 37 LDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN 96
LD A +F+Q+P+ +++++N +I L S + + VF M N +
Sbjct: 189 LDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIK 248
Query: 97 GLIDEAL----RVFHGMPLK-----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVAS 147
+ + + HGM +K DV N +I +C +DLA F+
Sbjct: 249 AVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFE--------- 299
Query: 148 WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRD- 206
M+ G KD+ +WN M+ G++ G A DLF++M +
Sbjct: 300 ---MIEG-----------------NNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGV 339
Query: 207 ----------LTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
+++ + +N L R++ I + M N+ I + ++ G V+
Sbjct: 340 HPNAVTMVSVMSACAKTMN-LTLGRKVCDYIDRNEMMMNL--NVCNATIDMFVKCGEVEI 396
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
A + ++ SWT +I GY +M E G A +F+ M +D+ WNV+I G ++
Sbjct: 397 ARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRP 456
Query: 317 EEGLKFF--VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT-TVS 373
+E L F +Q+ +SG PD T S L+ C+ L +D+G IH IK R Q ++
Sbjct: 457 KEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGY-IKKERIQLNRNLA 515
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
++I MY++ G+++ A+ F S+ D+ W+++I GLA HG E A+ELF M+ T K
Sbjct: 516 TSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVK 575
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
P+ +TF +L ACS++GLVD+G+ FD M+ Y + P++ HY+C+VD+LGR G ++EA+
Sbjct: 576 PNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALK 635
Query: 494 LLNEIRADGIEVSP--TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMY 551
+ +G+ ++P +VWGALLGAC IH N+++ E A R++E+EP N G Y++L+ +Y
Sbjct: 636 FI-----EGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLY 690
Query: 552 LSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
G E + QM+++G+KKE GCS I+I+ H F+ GD++HP
Sbjct: 691 AKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHP 737
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/511 (24%), Positives = 223/511 (43%), Gaps = 110/511 (21%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM--------------------P 48
A+ +FD++PQ + +WN++IR + ++ +F +M
Sbjct: 192 ARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVA 251
Query: 49 ER--------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGME--VRDVVTW 86
ER D+F N++I ++ A VF+ +E +D+V+W
Sbjct: 252 ERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSW 311
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDV---------------VSWNLVIG--------- 122
NSM++G+V G D+AL +F M + V + NL +G
Sbjct: 312 NSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDR 371
Query: 123 ---------------ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
V C +++A F M RDV SWT +++G + AR +
Sbjct: 372 NEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDI 431
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
FD MP KD+ AWN++I+GY +G A +F+++ L S +
Sbjct: 432 FDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQ-------------LTKSGARPDQV 478
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGS 287
+ + C + I I +G +K+ L + N+A T++I Y + G+V
Sbjct: 479 TLLSTL-SACAQLGAMDIGEWI-HGYIKKERIQLNR----NLA--TSLIDMYSKSGDVEK 530
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
AI+VF + +DV VW+ MI GL + GE ++ F+ M+E+ P++ TFT++L CS
Sbjct: 531 AIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSH 590
Query: 348 LPTLDLGRQIHAQAIKI-ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS-WN 405
+D G+++ + ++ T + M+ + R G+++ AL +P+ S W
Sbjct: 591 SGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWG 650
Query: 406 SIICGLAYHGYAEKALELFERM--RLTDFKP 434
+++ HG LEL E+ RL + +P
Sbjct: 651 ALLGACCIHG----NLELAEKACSRLLEIEP 677
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 195/666 (29%), Positives = 330/666 (49%), Gaps = 83/666 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTY- 55
+R + +A +F +M +R+ +WNV++ GY K G D A+ L+++M + D++T+
Sbjct: 152 VRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFP 211
Query: 56 ----------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVR 81
N +I ++ +V A+ VFD M R
Sbjct: 212 CVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNR 271
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI--GALVNCQRMDLAESYFKE 139
D ++WN+MISGY NG+ E LR+F GM +K V +L+ + C+ +
Sbjct: 272 DRISWNAMISGYFENGVCLEGLRLF-GMMIKYPVDPDLMTMTSVITACELL--------- 321
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
G R GR + L + +D N +I Y G + AE +F
Sbjct: 322 --------------GDDRLGRQIHGYVLRTEF-GRDPSIHNSLIPMYSSVGLIEEAETVF 366
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-------ETCEKTWNSIISVLIRNG 252
+ RDL SW +I+G N A+ +K M E S S L
Sbjct: 367 SRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLD 426
Query: 253 LVKEAHSYLEK---YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
+ H ++ YS +A+ ++I Y + + A+++F +++ W +I G
Sbjct: 427 MGMNLHEVAKQKGLVSYSIVAN--SLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILG 484
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
L N+ E L FF +M P++ T VL+ C+ + L G++IHA A++ +
Sbjct: 485 LRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFD 543
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
+ NA++ MY RCG ++ A +F SV H++ SWN ++ G A G A ELF+RM
Sbjct: 544 GFMPNAILDMYVRCGRMEYAWKQFFSVD-HEVTSWNILLTGYAERGKGAHATELFQRMVE 602
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
++ P+++TF+ +L ACS +G+V +G YF+ MK KY + P HY CVVDLLGR G ++
Sbjct: 603 SNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLE 662
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
EA + ++ ++ P VWGALL +CRIH+++++GE+A E + + + + G Y++L+
Sbjct: 663 EAYEFIQKM---PMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSN 719
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNL 609
+Y G+ + + M++NG+ +PGCSW+++ H FLS D+ HP+ + LL
Sbjct: 720 LYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLER 779
Query: 610 LHTEIE 615
+ +++
Sbjct: 780 FYKKMK 785
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 191/410 (46%), Gaps = 34/410 (8%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PL 111
N +++ ++ N+ A VF ME R++ +WN ++ GY GL DEAL ++H M
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVK 204
Query: 112 KDVVSWNLVI---GALVNCQRMDLAESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKL 167
DV ++ V+ G + N R + G DV ++ V+ G + AR +
Sbjct: 205 PDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLV 264
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
FDKMP +D +WN MI+GY +NG LF G++ +D +
Sbjct: 265 FDKMPNRDRISWNAMISGYFENGVCLEGLRLF----------------GMMIKYPVDPDL 308
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVG 286
+ CE +L + L ++ H Y+ + + S N ++ Y +G +
Sbjct: 309 MTMTSVITACE--------LLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIE 360
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A VF RD+ W MI G + ++ L+ + M+ G PD T VL+ CS
Sbjct: 361 EAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACS 420
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
L LD+G +H A + ++ V+N++I MYA+C I AL F S +I+SW S
Sbjct: 421 CLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTS 480
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
II GL + +AL F M + KP+ +T V VLSAC+ G + G+
Sbjct: 481 IILGLRINNRCFEALFFFREM-IRRLKPNSVTLVCVLSACARIGALTCGK 529
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 197/428 (46%), Gaps = 40/428 (9%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
+++ VR G +V+A +F +M +++ +WN+++ GY G A DL+ +M W
Sbjct: 147 LLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRM------LW 200
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
+ + F + TC N L+R +E H ++ +Y + +
Sbjct: 201 VG----------VKPDVYTFPCVLRTCGGMPN-----LVRG---REIHVHVIRYGFESDV 242
Query: 271 SWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
N ++ Y + G+V +A VF+ M RD WN MI G EN + EGL+ F M +
Sbjct: 243 DVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKY 302
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
PD T TSV+T C L LGRQIH ++ + ++ N++I MY+ G I+ A
Sbjct: 303 PVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEA 362
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
FS D++SW ++I G +KALE ++ M PD+IT VLSACS
Sbjct: 363 ETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCL 422
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
+D G + K K + S ++D+ + ID+A+ EI +E +
Sbjct: 423 CNLDMGMNLHEVAKQKGLVS-YSIVANSLIDMYAKCKCIDKAL----EIFHSTLEKNIVS 477
Query: 510 WGALLGACRIHNN-IKVGEIAGERVMELEPNNSGVYLILTEM----YLSCGRREDAKRIF 564
W +++ RI+N + E + L+PN+ + +L+ L+CG K I
Sbjct: 478 WTSIILGLRINNRCFEALFFFREMIRRLKPNSVTLVCVLSACARIGALTCG-----KEIH 532
Query: 565 AQMKENGV 572
A GV
Sbjct: 533 AHALRTGV 540
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 285/544 (52%), Gaps = 35/544 (6%)
Query: 43 LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEA 102
L + E+D F I+ ++ + VFD + WNS++SGY
Sbjct: 52 LIQKGLEQDSFLVTQFISASNSVAHISYSTSVFDRVLSPSTFLWNSLVSGYCAK------ 105
Query: 103 LRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIV 162
+ D++S + RM +E GA D ++ ++ EG+++
Sbjct: 106 ------LQFVDIISLYV---------RMK------REDGAPDRYTFPSLLKVCASEGKMM 144
Query: 163 EARKLFDKM----PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
E L + +D+ ++ Y G + A +F M +R++ SW +I G
Sbjct: 145 EGMALHGSILRCGVDEDIYVTTSLVNLYGKGGLIDCARKVFDGMSERNVVSWTAMIVGYS 204
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+ + A F MPE +WN+II ++ G VK A ++ P N+ S+T +I G
Sbjct: 205 SIGNLVEAKRLFDLMPERNVASWNAIIGGYMKMGDVKSAEKAFDEMPEKNVVSFTTMIDG 264
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G++ SA +F+ RD+ W+ +I G +N E +K F++M PD
Sbjct: 265 YAKAGDMLSARNLFQKAPERDIIAWSALISGYTQNGQPNEAVKTFLEMSSRNVKPDKFVL 324
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARN-QFTTVSNAMITMYARCGNIQSALLEFSSVP 397
TS++ CS L LDL + + + A + + + + V+ A+I M A+CGN++ A+ F +P
Sbjct: 325 TSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMP 384
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
D+IS+ S++ GL+ HG+ ++A+ LFERM D PDD+ F +L+ACS AGLVD+G +
Sbjct: 385 KRDLISYCSVMQGLSIHGHGDQAVSLFERMLGEDLTPDDVAFTVILTACSRAGLVDEGWH 444
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
YF+ M+ KY + P HY C+VDLL R G + EA L I++ ++ WGALLGAC
Sbjct: 445 YFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYEL---IKSVPVQSHAGAWGALLGAC 501
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
+++ + ++ E+ R++E+EP N+G Y++L+ +Y + R D + QM E G++K PG
Sbjct: 502 KLYCDSELAEVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPG 561
Query: 578 CSWI 581
CSWI
Sbjct: 562 CSWI 565
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 214/480 (44%), Gaps = 77/480 (16%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER------- 50
A I + ++FD++ T WN ++ GY + + L+ +M P+R
Sbjct: 75 AHISYSTSVFDRVLSPSTFLWNSLVSGYCAKLQFVDIISLYVRMKREDGAPDRYTFPSLL 134
Query: 51 --------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
D++ +++ + + A++VFDGM R+VV
Sbjct: 135 KVCASEGKMMEGMALHGSILRCGVDEDIYVTTSLVNLYGKGGLIDCARKVFDGMSERNVV 194
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
+W +MI GY G + EA R+F MP ++V SWN +IG + + AE F EM ++
Sbjct: 195 SWTAMIVGYSSIGNLVEAKRLFDLMPERNVASWNAIIGGYMKMGDVKSAEKAFDEMPEKN 254
Query: 145 VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD 204
V S+T M++G + G ++ AR LF K P +D+ AW+ +I+GY NG A F +M
Sbjct: 255 VVSFTTMIDGYAKAGDMLSARNLFQKAPERDIIAWSALISGYTQNGQPNEAVKTFLEMSS 314
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
R++ K ++ L+ + + K + ++ + SV +R V A
Sbjct: 315 RNVKPDKFVLTSLMLACSQLGNLDLAKWV-----DSYATRCSVDLRGAHVTAA------- 362
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
+I + G + A+ +FE M RD+ + ++ GL + G++ + F
Sbjct: 363 ----------LIDMNAKCGNMERAMYLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFE 412
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-----AMITM 379
+M +PD+ FT +LT CS +D G ++ R +++ V + ++ +
Sbjct: 413 RMLGEDLTPDDVAFTVILTACSRAGLVDEGWHY----FEMMRCKYSMVPSVDHYACIVDL 468
Query: 380 YARCGNIQSALLEFSSVPIHDII-SWNSII--CGLAYHGYAEKALELFERMRLTDFKPDD 436
+R G ++ A SVP+ +W +++ C L Y + L RL + +P++
Sbjct: 469 LSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKL----YCDSELAEVVASRLIEIEPEN 524
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 135/298 (45%), Gaps = 53/298 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ ++ A+ FD+MP+++ V++ MI GY K G + +A LF + PERD+ ++ +I+
Sbjct: 235 MKMGDVKSAEKAFDEMPEKNVVSFTTMIDGYAKAGDMLSARNLFQKAPERDIIAWSALIS 294
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G Q NG +EA++ F M ++V V
Sbjct: 295 GYTQ-------------------------------NGQPNEAVKTFLEMSSRNVKPDKFV 323
Query: 121 IGAL-VNCQR---MDLA---ESYFKEMGA--RDVASWTIMVNGLVREGRIVEARKLFDKM 171
+ +L + C + +DLA +SY R +++ + G + A LF+KM
Sbjct: 324 LTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKM 383
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAI 227
P +D+ ++ ++ G +G A LF++M DLT ++ ++ + +D
Sbjct: 384 PKRDLISYCSVMQGLSIHGHGDQAVSLFERMLGEDLTPDDVAFTVILTACSRAGLVDEGW 443
Query: 228 SYFKQMPETCEKT-------WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
YF+ M C+ + + I+ +L R+G +KEA+ ++ P + A ++G
Sbjct: 444 HYFEMM--RCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLG 499
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
+ +++L +C +DL Q+HA I+ Q + + I+ +I + F V
Sbjct: 31 SISALLKLCK--THIDL-HQVHAHLIQKGLEQDSFLVTQFISASNSVAHISYSTSVFDRV 87
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
WNS++ G + L+ RM+ D PD TF +L C+ G + +G
Sbjct: 88 LSPSTFLWNSLVSGYCAKLQFVDIISLYVRMKREDGAPDRYTFPSLLKVCASEGKMMEGM 147
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI-EVSPTVWGALL- 514
+ + + T +V+L G+ GLID A + DG+ E + W A++
Sbjct: 148 ALHGSIL-RCGVDEDIYVTTSLVNLYGKGGLIDCARKVF-----DGMSERNVVSWTAMIV 201
Query: 515 GACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
G I N ++ +R+ +L P N + + Y+ G + A++ F +M E V
Sbjct: 202 GYSSIGNLVE-----AKRLFDLMPERNVASWNAIIGGYMKMGDVKSAEKAFDEMPEKNV 255
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/565 (32%), Positives = 299/565 (52%), Gaps = 19/565 (3%)
Query: 67 NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN 126
+++ A+ VFD M + WN+MI GY G + A+ ++ M + V+ L+
Sbjct: 68 DMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLK 127
Query: 127 CQRMDLAESYFKEMGARDV----ASWTIMVNGLVR----EGRIVEARKLFDKMPAKDVQA 178
D A +E+ V +S + N L+ G + AR +FD+ DV
Sbjct: 128 RFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVT 187
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHD-RDLTSWKQLINGLVNSRRID------AAISYFK 231
WN+MI+GY + + LF +M R L S L++ L ++ Y K
Sbjct: 188 WNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVK 247
Query: 232 QMP-ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+ E N++I + G + A + ++ SWT ++ G+ +G+VG A
Sbjct: 248 DLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARN 307
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
F+ M RD W MI G + + +E L F +M+ + PD T S+LT C+ L
Sbjct: 308 YFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGA 367
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
L+LG I A K + V NA+I MY CGN++ A+ F+++P D ISW ++I G
Sbjct: 368 LELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFG 427
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
LA +GY E+AL++F +M PD++T +GVL AC+++G+VD+G+ +F M ++ ++P
Sbjct: 428 LAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEP 487
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
AHY C+VDLLGR G + EA ++ + ++ + VWG+LLGACR+H + ++ E+A
Sbjct: 488 NVAHYGCMVDLLGRAGHLKEAHEVIKNM---PVKPNSIVWGSLLGACRVHRDEEMAEMAA 544
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVF 590
++++ELEP N VY++L +Y +C R E + M + G+KK PGCS I++N H F
Sbjct: 545 QQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEF 604
Query: 591 LSGDSSHPKFHRLRYLLNLLHTEIE 615
++GD HP+ + L+ + +++
Sbjct: 605 VAGDQVHPQSKEIYSKLDEMSVDLK 629
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 199/499 (39%), Gaps = 111/499 (22%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTY------ 55
++ A+ +FD MP + WN MI+GY + G ++A+ ++ +M ER D +TY
Sbjct: 69 MEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKR 128
Query: 56 -----------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
N +I S V A+ VFD DVVTW
Sbjct: 129 FTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTW 188
Query: 87 NSMISGYVCNGLIDEALRVFHGM--------------------PLKDV------------ 114
N MISGY + DE++++F M LKD+
Sbjct: 189 NVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKD 248
Query: 115 -------VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
V N +I C MD A F M +RDV SWT +V G G++ AR
Sbjct: 249 LKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNY 308
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
FDKMP +D +W MI GYL LF++M ++
Sbjct: 309 FDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIK------------------- 349
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAH---SYLEKYPYSNIASWTNVIVG-YFEMG 283
P+ E T SI++ G ++ +Y++K + N ++ YF G
Sbjct: 350 ------PD--EFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCG 401
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
V AI++F M RD W +IFGL N GEE L F QM ++ +PD T VL
Sbjct: 402 NVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLC 461
Query: 344 ICSDLPTLDLGRQIHAQ-AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DI 401
C+ +D G++ A+ + M+ + R G+++ A ++P+ +
Sbjct: 462 ACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNS 521
Query: 402 ISWNSIICGLAYHGYAEKA 420
I W S++ H E A
Sbjct: 522 IVWGSLLGACRVHRDEEMA 540
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 176/392 (44%), Gaps = 70/392 (17%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G + AR +FD MP + WN MI GY GC A ++ +M +R +
Sbjct: 67 GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGV----------- 115
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK---EAHSYLEKYPYSNIASWTNV 275
MP+ E T+ ++ R+ VK E H ++ K +S+ N
Sbjct: 116 --------------MPD--EYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNA 159
Query: 276 IVGYFEM-GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ + + GEV A VF+ + DV WNVMI G + +E +K F +M+ P
Sbjct: 160 LIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPS 219
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ T SVL+ CS L L++G+++H + + NA+I MYA CG++ +AL F
Sbjct: 220 SITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFD 279
Query: 395 SVPIHDIISWNSIICGLAYHGYA-------------------------------EKALEL 423
++ D+ISW +I+ G G ++ L L
Sbjct: 280 NMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSL 339
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY---YFDCMKNKYFLQPRSAHYTCVVD 480
F M+ + KPD+ T V +L+AC++ G ++ G + Y D KN+ ++ S ++D
Sbjct: 340 FREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYID--KNE--IKIDSFVGNALID 395
Query: 481 LLGRFGLIDEAMNLLNEI-RADGIEVSPTVWG 511
+ G +++A+ + N + D I + ++G
Sbjct: 396 MYFNCGNVEKAIRIFNAMPHRDKISWTAVIFG 427
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 132/295 (44%), Gaps = 8/295 (2%)
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
E+G++ A VF+ M + VWN MI G + + +M E G PD T+
Sbjct: 65 ELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPF 124
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
+L + + GR++H +K+ + V NA+I +Y+ G + A F D
Sbjct: 125 LLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGD 184
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+++WN +I G +++++LF+ M P IT V VLSACS ++ G+
Sbjct: 185 VVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHR 244
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
+K+ ++P ++D+ G +D A+ + + +++ + W A++
Sbjct: 245 YVKD-LKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDV----ISWTAIVTG---F 296
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
N+ +A ++ + + + + YL R ++ +F +M+ +K +
Sbjct: 297 TNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPD 351
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 188/579 (32%), Positives = 307/579 (53%), Gaps = 50/579 (8%)
Query: 37 LDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN 96
LD A LF+Q+P+ +++T+NT+I S + + +F + + N +V
Sbjct: 75 LDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIK 134
Query: 97 GLID-EALRV---FHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV 152
+ +A RV HGM +K L G MDL ++
Sbjct: 135 AASELKASRVGTAVHGMAIK------LSFG-------MDL-----------------YIL 164
Query: 153 NGLVRE----GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
N LVR G + A +LF + KDV +WN MI+ + C A +LF KM ++
Sbjct: 165 NSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVM 224
Query: 209 SWKQLINGLVNS--RRIDAAI-----SYFKQMPETCEKTW-NSIISVLIRNGLVKEAHSY 260
+ G++++ +++D SY ++ + T N+++ + + G V +A
Sbjct: 225 PNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKL 284
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
++ P ++ SWT ++ GY +MG+ +A VF M +++ WNV+I +N +E L
Sbjct: 285 FDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEAL 344
Query: 321 KFFVQMKESG-PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
F +++ S PD T S L+ C+ L +DLG IH + + ++++ M
Sbjct: 345 AIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDM 404
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
YA+CG+++ AL F SV D+ W+++I GL HG + A++LF M+ KP+ +TF
Sbjct: 405 YAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTF 464
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
VL ACS+AGLVD+GR +F M+ Y + P HY C+VD+LGR G ++EAM L+NE+
Sbjct: 465 TNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMS 524
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRED 559
S +VWGALLGAC +H N+++GE+A +++++LEP N G ++L+ +Y GR E
Sbjct: 525 TTP---SASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEK 581
Query: 560 AKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+ M++ +KKEPGCS I+ N H FL GD++HP
Sbjct: 582 VSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHP 620
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 146/613 (23%), Positives = 270/613 (44%), Gaps = 108/613 (17%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF-------NQMPER----------- 50
A+NLFD++PQ + TWN +IR Y + + +F +P +
Sbjct: 78 ARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAAS 137
Query: 51 ----------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
D++ N+++ ++ A+ +F G+ +DVV+WNS
Sbjct: 138 ELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNS 197
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNC-QRMDL-----AESYFKEMG 141
MIS + ++AL +F M ++V+ ++ ++G L C +++DL SY + G
Sbjct: 198 MISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKG 257
Query: 142 AR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
+ D+ M++ + G + +A+KLFD+MP +DV +W +M+ GY G A +F
Sbjct: 258 IKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFN 317
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-----PETCEKTWNSIISVLIRNGLVK 255
M +++ +W LI+ + + A++ F ++ + E T S +S + G +
Sbjct: 318 AMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAID 377
Query: 256 EA---HSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
H Y+++ N ++++ Y + G + A++VF + RDV VW+ MI GLG
Sbjct: 378 LGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLG 437
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+ G+ + F +M+E+ P++ TFT+VL CS +D GR + +
Sbjct: 438 MHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPV------- 490
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
+ VP ++ + ++ L G+ E+A+EL M T
Sbjct: 491 ---------------------YGVVP--EMKHYACMVDILGRAGFLEEAMELINEMSTT- 526
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL----GRFGL 487
P + +L ACS V+ G D + L+PR+ ++ + GR+
Sbjct: 527 --PSASVWGALLGACSLHMNVELGELASDQLLK---LEPRNHGAIVLLSNIYAKTGRWEK 581
Query: 488 IDEAMNLLNEIR------ADGIEVSPTVWGALLG--ACRIHNNI--KVGEIAGE-RVMEL 536
+ E L+ + IE + V L+G + +NI K+ EIA + + +
Sbjct: 582 VSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGY 641
Query: 537 EPNNSGVYLILTE 549
EPN S + ++ E
Sbjct: 642 EPNKSHLLQLIEE 654
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 133/304 (43%), Gaps = 51/304 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ +AQ LFD+MP+RD +W +M+ GY K G D A +FN MP +++ +N +I+ Q+
Sbjct: 278 VDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQN 337
Query: 66 DNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
+ A +F+ +++ D VT S +S G ID + + + +V +
Sbjct: 338 GKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHL 397
Query: 121 IGALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
I +LV+ C ++ A F + RDV W+ M+ GL GR A LF +M V
Sbjct: 398 ISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKV 457
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM--- 233
+ ++ L C GLV+ R+ +F +M
Sbjct: 458 KPNSVTFTNVL-CACSHA---------------------GLVDEGRV-----FFHEMEPV 490
Query: 234 ----PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY------FEMG 283
PE K + ++ +L R G ++EA + + + AS ++G E+G
Sbjct: 491 YGVVPEM--KHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELG 548
Query: 284 EVGS 287
E+ S
Sbjct: 549 ELAS 552
>gi|255558480|ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540484|gb|EEF42051.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 681
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/626 (29%), Positives = 320/626 (51%), Gaps = 55/626 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ +A NLFD+MP+R+ +WN MI GY + G + ++ LF+ MP+++ +++N VI+G ++
Sbjct: 58 MTDAHNLFDEMPERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQKNDYSWNVVISGFAKA 117
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM---PLKDVVSWNLVIG 122
+ AK++F+ M R+ V WNSMI GY NG EA+ +F + PL+ V+
Sbjct: 118 GELDVAKKLFNEMPRRNGVAWNSMIHGYARNGFAREAVGLFKELNSNPLEKSCGDTFVLA 177
Query: 123 ALVN-CQRMDLAESYFKEMGAR----DVASWTIMVNGLV----REGRIVEARKLFDKMPA 173
+++ C + E Y K++ AR DV +++++ L+ + G + A + M
Sbjct: 178 SVIGACADLGAIE-YGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLKMMDE 236
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
D + + +I GY + G + A +F+ + W LI+G VN+ A + +M
Sbjct: 237 VDDFSLSALIMGYANCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFALVNEM 296
Query: 234 PETCEKTWNSIISVLI--------------------RNGLVKE---AHSYLEKYP----- 265
+ +S I+V++ + GL+ A ++++ Y
Sbjct: 297 KNNRVQVDSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNP 356
Query: 266 ------YSNIASWTNV-----IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+S + ++ V I Y G + A +FE M ++ + WN +I GL +N
Sbjct: 357 NDACKLFSELKAYDTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNA 416
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
E L F +M + D + SV++ C+ + +L+LG Q+ A+AI VS
Sbjct: 417 YPLEALDVFGKMNKLDLRMDRFSLASVISACACISSLELGEQVFARAIITGLESDQAVST 476
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
+++ Y +CG I++ F S+ D +SWNS++ G A +GY + L LF M+ +P
Sbjct: 477 SLVDFYCKCGFIENGRKLFDSMIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQAGLRP 536
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
DITF GVLSAC + GLV++GR +F+ MK Y + P HY+C+VDL R G + EA+NL
Sbjct: 537 TDITFTGVLSACDHCGLVEEGRKWFNIMKYDYHIDPGIEHYSCMVDLFARAGCLKEALNL 596
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
+ + E ++W ++L C H + +G+ +++++L P +S Y+ L+ ++ +
Sbjct: 597 VEHMP---FEADCSMWSSVLRGCVAHGDKDLGKKVAQQIIQLNPESSSAYVQLSGIFATS 653
Query: 555 GRREDAKRIFAQMKENGVKKEPGCSW 580
G E + + M E VKK PG SW
Sbjct: 654 GDWESSALVRKIMTEKQVKKHPGFSW 679
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 205/464 (44%), Gaps = 51/464 (10%)
Query: 95 CNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNG 154
C G + +A +F MP ++ SWN +I + + + F M ++ SW ++++G
Sbjct: 54 CGGTMTDAHNLFDEMPERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQKNDYSWNVVISG 113
Query: 155 LVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLI 214
+ G + A+KLF++MP ++ AWN MI GY NG A LF++++ L K
Sbjct: 114 FAKAGELDVAKKLFNEMPRRNGVAWNSMIHGYARNGFAREAVGLFKELNSNPLE--KSCG 171
Query: 215 NGLVNSRRIDA-----AISYFKQMP--------ETCEKTWNSIISVLIRNGLVKEAHSYL 261
+ V + I A AI Y KQ+ E +S+I++ + G + A+ L
Sbjct: 172 DTFVLASVIGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVL 231
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
+ + S + +I+GY G + A+++F + VWN +I G N +
Sbjct: 232 KMMDEVDDFSLSALIMGYANCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFA 291
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA---------------- 365
+MK + D++T T +L+ CS +Q+H K+
Sbjct: 292 LVNEMKNNRVQVDSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYS 351
Query: 366 --RNQF-------------TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
RN T + N+MIT Y CG I+ A F ++P +ISWNSII G
Sbjct: 352 KCRNPNDACKLFSELKAYDTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVG 411
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
LA + Y +AL++F +M D + D + V+SAC+ ++ G F L+
Sbjct: 412 LAQNAYPLEALDVFGKMNKLDLRMDRFSLASVISACACISSLELGEQVF-ARAIITGLES 470
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
A T +VD + G I+ L + + I+ W ++L
Sbjct: 471 DQAVSTSLVDFYCKCGFIENGRKLFDSM----IKTDEVSWNSML 510
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 15/222 (6%)
Query: 354 GRQIHAQAIKIAR-NQFTTVSNAMITMYARC-GNIQSALLEFSSVPIHDIISWNSIICGL 411
G+Q+H +K N +++N ++ MYARC G + A F +P + SWN++I G
Sbjct: 24 GKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAHNLFDEMPERNCFSWNTMIEGY 83
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
G E++L+LF+ M + +D ++ V+S + AG +D + F+ M +
Sbjct: 84 MRVGDKERSLKLFDLMP----QKNDYSWNVVISGFAKAGELDVAKKLFNEMPRR-----N 134
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS---PTVWGALLGACRIHNNIKVGEI 528
+ ++ R G EA+ L E+ ++ +E S V +++GAC I+ G+
Sbjct: 135 GVAWNSMIHGYARNGFAREAVGLFKELNSNPLEKSCGDTFVLASVIGACADLGAIEYGKQ 194
Query: 529 AGERVMELEPNNSGVYL-ILTEMYLSCGRREDAKRIFAQMKE 569
R++ + V + L +Y CG + A + M E
Sbjct: 195 VHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLKMMDE 236
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 204/691 (29%), Positives = 337/691 (48%), Gaps = 93/691 (13%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----------------------P- 48
+ +++ V WN++IR + K G LD+A+ + +M P
Sbjct: 118 VLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPS 177
Query: 49 ----------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR---DVVTWNSM 89
E ++F N ++A + +++ A +FD + R DV++WNS+
Sbjct: 178 YRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSI 237
Query: 90 ISGYVCNGLIDEALRVFHGMPL----------KDVVSWNLVIGALVNC-------QRMDL 132
+S +V + AL +F M L D++S ++ L C Q ++
Sbjct: 238 VSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS---IVNILPACGSLKAVPQTKEV 294
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
+ + DV +++ + G + A K+F+ M KDV +WN M+AGY +G
Sbjct: 295 HGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNF 354
Query: 193 GVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCE-KTWNSIISV 247
A +LF+ M D+ +W +I G A++ F+QM + +IISV
Sbjct: 355 EAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISV 414
Query: 248 LIRNGLVKEAHSYLEKYPYS-----------------NIASWTNVIVGYFEMGEVGSAIK 290
L + E + YS ++ + +I Y + +A
Sbjct: 415 LSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARS 474
Query: 291 VFE--LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM--KESGPSPDNATFTSVLTICS 346
+F+ + R+V W VMI G + + LK FV+M + G +P+ T + +L C+
Sbjct: 475 IFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACA 534
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTT--VSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
L + +G+QIHA ++ R + + V+N +I MY++CG++ +A F S+ ISW
Sbjct: 535 HLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISW 594
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
S++ G HG +AL++F++MR F PDDITF+ VL ACS+ G+VDQG YFD M
Sbjct: 595 TSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSA 654
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
Y L PR+ HY C +DLL R G +D+A + ++ +E + VW ALL ACR+H+N++
Sbjct: 655 DYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMP---MEPTAVVWVALLSACRVHSNVE 711
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIN 584
+ E A +++E+ N G Y +++ +Y + GR +D RI MK++G+KK PGCSW+Q
Sbjct: 712 LAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQ 771
Query: 585 DGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
G F GD SHP ++ LL L I+
Sbjct: 772 KGTASFFVGDRSHPLSPQIYALLESLIDRIK 802
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 124/529 (23%), Positives = 229/529 (43%), Gaps = 66/529 (12%)
Query: 47 MPERDMFTYNTVIAGLMQSDNVQGAKE----VFDGMEVRDVVTWNSMISGYVCNGLIDEA 102
+P + ++ G++ S GA + V + + V WN +I ++ G +D A
Sbjct: 87 LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 146
Query: 103 L----RVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV-- 156
+ R+ D + V+ A ++ + S + N LV
Sbjct: 147 INVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAM 206
Query: 157 --REGRIVEARKLFDKMPAK---DVQAWNLMIAGYLDNGCVGVAEDLFQKM----HDRDL 207
R G + EA +FD++ + DV +WN +++ ++ + A DLF KM H++
Sbjct: 207 YSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPT 266
Query: 208 TSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI--------------ISVLIRNGL 253
+I+ +VN I A K +P+T E N+I I + GL
Sbjct: 267 NERSDIIS-IVN---ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGL 322
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR----DVTVWNVMIFG 309
++ A + ++ SW ++ GY + G +A ++F+ M DV W +I G
Sbjct: 323 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAG 382
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK----IA 365
+ E L F QM SG P+ T SVL+ C+ L G +IHA ++K
Sbjct: 383 YSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTL 442
Query: 366 RNQF------TTVSNAMITMYARCGNIQSALLEFSSVPIHD--IISWNSIICGLAYHGYA 417
N F V NA+I MY++C + ++A F +P+ + +++W +I G A +G +
Sbjct: 443 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 502
Query: 418 EKALELFERMRLTDF--KPDDITFVGVLSACSYAGLVDQGR--YYFDCMKNKYFLQPRSA 473
AL+LF M + P+ T +L AC++ + G+ + + ++Y SA
Sbjct: 503 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRY---ESSA 559
Query: 474 HYT--CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
++ C++D+ + G +D A ++ + + + S W +++ +H
Sbjct: 560 YFVANCLIDMYSKCGDVDTARHVFDSMS----QKSAISWTSMMTGYGMH 604
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 137/320 (42%), Gaps = 25/320 (7%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T V+ Y G A+ V E +T WN++I + + + +M +G
Sbjct: 100 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 159
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMYARCGNIQSA 389
PD+ T VL C +LP+ G H I N F + + NA++ MY+RCG+++ A
Sbjct: 160 PDHFTLPHVLKACGELPSYRCGSAFHGL---ICCNGFESNVFICNALVAMYSRCGSLEEA 216
Query: 390 LLEFSSVP---IHDIISWNSIICGLAYHGYAEKALELFERMRL------TDFKPDDITFV 440
+ F + I D+ISWNSI+ A AL+LF +M L T+ + D I+ V
Sbjct: 217 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 276
Query: 441 GVLSACSYAGLVDQGR-YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+L AC V Q + + + ++N F P ++D + GL++ A+ + N +
Sbjct: 277 NILPACGSLKAVPQTKEVHGNAIRNGTF--PDVFVGNALIDAYAKCGLMENAVKVFNMME 334
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
+ W A++ N + E+ E P + + + Y G
Sbjct: 335 FKDV----VSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 390
Query: 559 DAKRIFAQMKENGVKKEPGC 578
+A +F QM +G P C
Sbjct: 391 EALNLFRQMIFSG--SLPNC 408
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 173/449 (38%), Gaps = 78/449 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
++ A +F+ M +D V+WN M+ GY ++G + A LF M + D+ T+ VIAG
Sbjct: 323 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAG 382
Query: 62 LMQSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----- 112
Q A +F M + + VT S++S G + + H LK
Sbjct: 383 YSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEI-HAYSLKNCLLT 441
Query: 113 ----------DVVSWNLVIGALVNCQRMDLAESYFKE--MGARDVASWTIMVNGLVREGR 160
D++ +N +I C+ A S F + + R+V +WT+M+ G + G
Sbjct: 442 LDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD 501
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+A KLF +M + + + + Y + C+ L H + KQ+ ++
Sbjct: 502 SNDALKLFVEMIS---EPYGVAPNAYTIS-CI-----LMACAHLAAIRIGKQIHAYVLRH 552
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
R +++ +YF N +I + + G V A + + SWT+++ GY
Sbjct: 553 HRYESS-AYF---------VANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGY- 601
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
G + G E L F +M+++G PD+ TF
Sbjct: 602 ------------------------------GMHGRGSEALDIFDKMRKAGFVPDDITFLV 631
Query: 341 VLTICSDLPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
VL CS +D G + + I + AR G + A +P+
Sbjct: 632 VLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPME 691
Query: 400 DI-ISWNSIICGLAYHGYAEKALELFERM 427
+ W +++ H E A ++
Sbjct: 692 PTAVVWVALLSACRVHSNVELAEHALNKL 720
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 20/183 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+ A+++FD M Q+ ++W M+ GY +G A+ +F++M + D T+ V+
Sbjct: 576 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 635
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLKDV 114
V FD M +T + Y C +G +D+A R MP++
Sbjct: 636 CSHCGMVDQGLSYFDSMSADYGLTPRA--EHYACAIDLLARSGRLDKAWRTVKDMPMEPT 693
Query: 115 -VSWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGR---IVEARKL 167
V W ++ A ++LAE EM A + S+T++ N GR + R L
Sbjct: 694 AVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHL 753
Query: 168 FDK 170
K
Sbjct: 754 MKK 756
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 190/537 (35%), Positives = 283/537 (52%), Gaps = 49/537 (9%)
Query: 104 RVFHGMPLKDVVSWNL-----VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE 158
+ H LK + +N VI + MD A F + RD S+T ++ G V +
Sbjct: 151 KQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQ 210
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G + +AR+LFD++P KDV +WN MI+GY+ +G A F +M Q N L
Sbjct: 211 GCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEM---------QEANVLP 261
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG-LVKEAHSYLEKYPYSNIASWTNVIV 277
N + +S C T R+G L K S++ + + TN ++
Sbjct: 262 NKSTMVVVLS-------ACGHT---------RSGELGKWIGSWVRDNGFGSNLQLTNALI 305
Query: 278 G-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + GE A ++F+ + +DV WN MI G L EE L F M S P++
Sbjct: 306 DMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDV 365
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF-TTVSNAMITMYARCGNIQSALLEFSS 395
TF +L C+ L LDLG+ +HA K RN ++ ++I MYA+CG I++A F S
Sbjct: 366 TFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRS 425
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD-FKPDDITFVGVLSACSYAGLVDQ 454
+ ++ SWN+++ G A HG+AE+AL LF M F+PDDITFVGVLSAC+ AGLVD
Sbjct: 426 MHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDL 485
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP--TVWGA 512
G YF M Y + P+ HY C++DLL R +EA EI +E+ P +WG+
Sbjct: 486 GHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEA-----EILMKNMEMEPDGAIWGS 540
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LL AC+ H ++ GE ER+ +LEP N+G +++L+ +Y GR +D RI ++ + G+
Sbjct: 541 LLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGM 600
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER--------EILFD 621
KK PGC+ I+I+ H FL GD HP+ + + +LN + +E E+L+D
Sbjct: 601 KKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYD 657
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 217/504 (43%), Gaps = 65/504 (12%)
Query: 9 AQNLFDKMPQR---DTVTWNVMIRGYFKNGFLDNA------MCLFNQMPERDMFTY---- 55
A +LF++ Q + WN +IRGY + ++ M + P F +
Sbjct: 81 ALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKS 140
Query: 56 -----------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
+VI + A+ VFD +RD V++
Sbjct: 141 CTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSF 200
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV- 145
++I+GYV G +D+A R+F +P+KDVVSWN +I V R + A F EM +V
Sbjct: 201 TALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVL 260
Query: 146 ---ASWTIMVN--GLVREGRIVE--ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
++ ++++ G R G + + + D ++Q N +I Y G +A +L
Sbjct: 261 PNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIAREL 320
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNG-- 252
F + ++D+ SW +I G + A++ F+ M + K T+ I+ G
Sbjct: 321 FDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGAL 380
Query: 253 -LVKEAHSYLEK--YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
L K H+Y++K SN + WT++I Y + G + +A +VF M +R++ WN M+ G
Sbjct: 381 DLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSG 440
Query: 310 LGENDLGEEGLKFFVQMKESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIK-IARN 367
+ E L F +M G PD+ TF VL+ C+ +DLG Q I+ +
Sbjct: 441 FAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGIS 500
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFER 426
MI + AR + A + ++ + D W S++ HG E + E
Sbjct: 501 PKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAE- 559
Query: 427 MRLTDFKPDDITFVGVLSACSYAG 450
RL +P++ +LS YAG
Sbjct: 560 -RLFQLEPENAGAFVLLSNI-YAG 581
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 135/282 (47%), Gaps = 55/282 (19%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ +A+ LFD++P +D V+WN MI GY ++G + A+ F +M E ++ + + ++ +
Sbjct: 213 LDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSA 272
Query: 66 ------------------DNVQG---------------------AKEVFDGMEVRDVVTW 86
DN G A+E+FDG+E +DV++W
Sbjct: 273 CGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISW 332
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNCQ---RMDLAE---SYFK 138
N+MI GY L +EAL +F M L+ V N V +G L C +DL + +Y
Sbjct: 333 NTMIGGYSYLSLYEEALALFEVM-LRSNVKPNDVTFLGILHACACLGALDLGKWVHAYID 391
Query: 139 E--MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
+ + + + WT +++ + G I A ++F M ++++ +WN M++G+ +G A
Sbjct: 392 KNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERAL 451
Query: 197 DLFQKMHDRDL-----TSWKQLINGLVNSRRIDAAISYFKQM 233
LF +M ++ L ++ +++ + +D YF+ M
Sbjct: 452 ALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSM 493
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 156/391 (39%), Gaps = 87/391 (22%)
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEM---GEVGSAIKVFE---LMTTRDVTVWNVMIF 308
K+ HS + K +N + ++ + + G++ A+ +FE +V +WN +I
Sbjct: 45 KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
G + L F +M G P++ TF + C+ G+Q+HA A+K+A +
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHF 164
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSS-------------------------------VP 397
V ++I MYA G + A L F +P
Sbjct: 165 NPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIP 224
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ D++SWN++I G G E+A+ F M+ + P+ T V VLSAC + + G++
Sbjct: 225 VKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKW 284
Query: 458 YFDCMKNKYF---LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV-WGAL 513
+++ F LQ +A ++D+ + G D A L DGIE + W +
Sbjct: 285 IGSWVRDNGFGSNLQLTNA----LIDMYCKCGETDIARELF-----DGIEEKDVISWNTM 335
Query: 514 LGA---------------CRIHNNIKVGEIAGERVMEL---------------------- 536
+G + +N+K ++ ++
Sbjct: 336 IGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLR 395
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+N+ ++ L +MY CG E A+R+F M
Sbjct: 396 NSSNASLWTSLIDMYAKCGCIEAAERVFRSM 426
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 205/673 (30%), Positives = 323/673 (47%), Gaps = 59/673 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
+ +++ A+ LFD+MPQR V+WN MI Y K+G A+ L M M T+++
Sbjct: 44 KQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSS 103
Query: 58 VIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V++ + ++ K + G E ++V ++++ Y I EA RVF + +
Sbjct: 104 VLSVCARLRCLRDGKLIHCLVLKSGSESFELVG-SALLYFYASCFEIGEARRVFDVLVRR 162
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREG----RIVEARKLF 168
+ V W+L++ V C MD A S F +M RDV +WT +++G + G + +E +L
Sbjct: 163 NEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRLM 222
Query: 169 ----DKMPAK---------------------------------DVQAWNLMIAGYLDNGC 191
+ P + D ++ Y +
Sbjct: 223 MRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEA 282
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN 251
+ A + + + + L + LI GL++ RI+ A F M E ++N +I
Sbjct: 283 IDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVG 342
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE-LMTTRDVTVWNVMIFGL 310
G + ++ EK P I S +I Y GE+ A+++FE +D WN MI G
Sbjct: 343 GQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGY 402
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+ EE LK ++ M +TF+++ CS L +L G+ +HA IK
Sbjct: 403 IHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNV 462
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
V ++I MY++CG+I A F S+ ++ +W ++I G AYHG +A+ LF+RM
Sbjct: 463 YVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQ 522
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
P+ TFVGVLSACS AGLV++G F M+ Y + P HY CVVDLLGR G I E
Sbjct: 523 GLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIRE 582
Query: 491 AMNLLNE--IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
A + + + ADG+ VWGALL AC +++VGE E++ +P Y+IL+
Sbjct: 583 AEEFIKKMPLEADGV-----VWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILS 637
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
+Y GR + + ++ VKK+PGCSWI++N+ HVF D SHP + + L
Sbjct: 638 NIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELNNKIHVFSIEDRSHPYCNMIYATLE 697
Query: 609 LLHTEIEREILFD 621
L I + FD
Sbjct: 698 HLTANINSVVHFD 710
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 196/468 (41%), Gaps = 54/468 (11%)
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
++ S I ++ ++ ++ AR+LFD+MP + V +WN MI+ Y +G A L MH
Sbjct: 31 EIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMH 90
Query: 204 DRDL----TSWKQLINGLVNSRRI-DAAISY---FKQMPETCEKTWNSIISVLIRNGLVK 255
+ +++ +++ R + D + + K E+ E ++++ +
Sbjct: 91 RSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIG 150
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
EA + N W+ ++VGY + A+ VF M RDV W +I G +N
Sbjct: 151 EARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGD 210
Query: 316 G-EEGLKFFVQMKESG-PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
G + L+ F M SG +P+ TF V+ C L L +GR +H +K ++
Sbjct: 211 GCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIG 270
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
A++ Y C I AL V + + NS+I GL G E A +F M T+
Sbjct: 271 GALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGM--TEMN 328
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
P +++ ++ + G +D + F+ M + + ++ + R G ID+A+
Sbjct: 329 P--VSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNT-----MISVYSRNGEIDKALE 381
Query: 494 LLNEIRAD--------------------------------GIEVSPTVWGALLGACRIHN 521
L E + + I+ + + + AL AC
Sbjct: 382 LFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLG 441
Query: 522 NIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQM 567
++ G++ +++ P S VY+ L +MY CG +A+ F +
Sbjct: 442 SLHQGQLLHAHLIK-TPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSI 488
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 141/334 (42%), Gaps = 41/334 (12%)
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
S I S I Y + ++ A ++F+ M R V WN MI ++ E L M
Sbjct: 30 SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 89
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
S +TF+SVL++C+ L L G+ IH +K F V +A++ YA C I
Sbjct: 90 HRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEI 149
Query: 387 -------------------------------QSALLEFSSVPIHDIISWNSIICGLAYHG 415
AL F +P D+++W ++I G + +G
Sbjct: 150 GEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNG 209
Query: 416 -YAEKALELFE-RMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSA 473
KALE+F MR + P++ TF V+ AC G++ GR + K L+ +
Sbjct: 210 DGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLM-KCGLEYDPS 268
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV 533
+V+ ID+A+ + + + ++ L+ RI + E+ +
Sbjct: 269 IGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIED----AELVFNGM 324
Query: 534 MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
E+ P + Y ++ + Y G+ +D+KR+F +M
Sbjct: 325 TEMNPVS---YNLMIKGYAVGGQMDDSKRLFEKM 355
>gi|302769356|ref|XP_002968097.1| hypothetical protein SELMODRAFT_89588 [Selaginella moellendorffii]
gi|300163741|gb|EFJ30351.1| hypothetical protein SELMODRAFT_89588 [Selaginella moellendorffii]
Length = 586
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 171/559 (30%), Positives = 278/559 (49%), Gaps = 32/559 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++A+ LFD++ DTV WN+++ Y +NG NA +F+ P+RDM ++NT+ S
Sbjct: 8 VEDARKLFDQIDNPDTVQWNIIVTAYAQNGHFQNAKSMFDSSPQRDMVSWNTMCQSFSWS 67
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
V + M +VV+WNS++ + NG +A +F MP KDV+SWN+VI
Sbjct: 68 HKVDEVSQCLQKMPQHNVVSWNSLLCTFAQNGHYPKAQALFVAMPEKDVISWNIVISQYA 127
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIV-------------------EARK 166
+D A+ F V +W +++ E + V + ++
Sbjct: 128 EID-LDRAKLLFDRAPQHSVVTWNVLIAHHCEESKRVFDAMPCRDIVSWNSLLDVDQDQE 186
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+F KMP+ D +W +IA G + A DLF + R L W +++G +S ++ A
Sbjct: 187 IFSKMPSHDAISWITVIAANAREGHLDCAMDLFDRSPSRSLALWNVILSGFASSGDVNRA 246
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVG 286
S MP T +WNS+++ L+ +++A P+ N++SWT ++ GY + E
Sbjct: 247 RSILSSMPRTDVISWNSLLAGLLEFSSLRDAGELFAAMPHRNLSSWTLLVGGYAQHCETP 306
Query: 287 --SAIKVFELMTTR---DVTVWNVMIFGLGENDLGEEGLKFFVQMK--ESGPSPDNATFT 339
+A + E M D+ WN MI G + E L+ + +++ + PD +TF
Sbjct: 307 RQAAAILLESMPQDERVDLVTWNAMIAGFARSGHSIEALELYRELEKLDRELQPDASTFA 366
Query: 340 SVLTICSDL--PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+V+ C+ P + GR IH QAI + V ++++ MY R G + +A F +
Sbjct: 367 AVIDACASAVPPAVSEGRAIHRQAIARGMDDDPVVGSSLVAMYTRIGGLDAAQRCFDRIT 426
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ ++WNS++ G A HG A ++ F M+L D +TFV VLS+CS+AG + +
Sbjct: 427 ARNTVAWNSMLVGFANHGSATGVIQSFHAMQLDGAIADAVTFVAVLSSCSHAGWIVEAGQ 486
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
F M +F+ HY+ + DLL R G I EA +L IRA E S W +LL AC
Sbjct: 487 CFQSMAADFFIAATPEHYSAIGDLLARLGQIGEARSL---IRAKPYESSAADWMSLLSAC 543
Query: 518 RIHNNIKVGEIAGERVMEL 536
RIH N++ G A + E
Sbjct: 544 RIHCNVEHGASAAAQAFEF 562
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 175/433 (40%), Gaps = 43/433 (9%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G + +ARKLFD++ D WN+++ Y NG A+ +F RD+ SW +
Sbjct: 6 GSVEDARKLFDQIDNPDTVQWNIIVTAYAQNGHFQNAKSMFDSSPQRDMVSWNTMCQSFS 65
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
S ++D ++MP+ +WNS++ +NG +A + P ++ SW VI
Sbjct: 66 WSHKVDEVSQCLQKMPQHNVVSWNSLLCTFAQNGHYPKAQALFVAMPEKDVISWNIVISQ 125
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y E+ ++ A +F+ V WNV+I EE + F M P D ++
Sbjct: 126 YAEI-DLDRAKLLFDRAPQHSVVTWNVLI-----AHHCEESKRVFDAM----PCRDIVSW 175
Query: 339 TSVL------TICSDLPTLDL----------GRQIHAQAIKIARNQFTTVS----NAMIT 378
S+L I S +P+ D R+ H ++ + S N +++
Sbjct: 176 NSLLDVDQDQEIFSKMPSHDAISWITVIAANAREGHLDCAMDLFDRSPSRSLALWNVILS 235
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
+A G++ A SS+P D+ISWNS++ GL A ELF M + +
Sbjct: 236 GFASSGDVNRARSILSSMPRTDVISWNSLLAGLLEFSSLRDAGELFAAMPHRNLSSWTLL 295
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS--AHYTCVVDLLGRFGLIDEAMNLLN 496
G YA + R + R + ++ R G EA+ L
Sbjct: 296 VGG------YAQHCETPRQAAAILLESMPQDERVDLVTWNAMIAGFARSGHSIEALELYR 349
Query: 497 EIRADGIEVSP--TVWGALLGACRIHNNIKVGE---IAGERVMELEPNNSGVYLILTEMY 551
E+ E+ P + + A++ AC V E I + + ++ V L MY
Sbjct: 350 ELEKLDRELQPDASTFAAVIDACASAVPPAVSEGRAIHRQAIARGMDDDPVVGSSLVAMY 409
Query: 552 LSCGRREDAKRIF 564
G + A+R F
Sbjct: 410 TRIGGLDAAQRCF 422
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 143/333 (42%), Gaps = 58/333 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R + A +LFD+ P R WNV++ G+ +G ++ A + + MP D+ ++N+++AG
Sbjct: 208 REGHLDCAMDLFDRSPSRSLALWNVILSGFASSGDVNRARSILSSMPRTDVISWNSLLAG 267
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYV--CNGLIDEALRVFHGMPLK---DVVS 116
L++ +++ A E+F M R++ +W ++ GY C A + MP D+V+
Sbjct: 268 LLEFSSLRDAGELFAAMPHRNLSSWTLLVGGYAQHCETPRQAAAILLESMPQDERVDLVT 327
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARD-------------VASWTIMVNGLVREGRIVE 163
WN +I A ++E+ D + + V V EGR +
Sbjct: 328 WNAMIAGFARSGHSIEALELYRELEKLDRELQPDASTFAAVIDACASAVPPAVSEGRAIH 387
Query: 164 ------------------------------ARKLFDKMPAKDVQAWNLMIAGYLDNG-CV 192
A++ FD++ A++ AWN M+ G+ ++G
Sbjct: 388 RQAIARGMDDDPVVGSSLVAMYTRIGGLDAAQRCFDRITARNTVAWNSMLVGFANHGSAT 447
Query: 193 GVAEDLFQKMHD---RDLTSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSI 244
GV + D D ++ +++ ++ I A F+ M + +++I
Sbjct: 448 GVIQSFHAMQLDGAIADAVTFVAVLSSCSHAGWIVEAGQCFQSMAADFFIAATPEHYSAI 507
Query: 245 ISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVI 276
+L R G + EA S + PY S+ A W +++
Sbjct: 508 GDLLARLGQIGEARSLIRAKPYESSAADWMSLL 540
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 198/657 (30%), Positives = 316/657 (48%), Gaps = 73/657 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER--------- 50
+ EA +F +P R VTWN +I GY + G A+ LF++M P+R
Sbjct: 171 MDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSA 230
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
D N +I + + A+++FD ME R++V+W
Sbjct: 231 CSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSW 290
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC--------QRMDLAESYFK 138
+MISGY+ N EA+ +F M +++N Q + K
Sbjct: 291 TTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIK 350
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
D +++ + + EAR +FD + D ++N MI GY N + A ++
Sbjct: 351 ADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNI 410
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
FQ+M L L+ AI KQ+ +GL+ ++
Sbjct: 411 FQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQI-----------------HGLIIKSG 453
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
+ L+ Y S + I Y + V A VF ++ +D+ +WN MIFG +N+ GEE
Sbjct: 454 TSLDLYAASAL------IDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEE 507
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
+K F Q+ SG +P+ TF +++T+ S L ++ G+Q HA IK + VSNA+I
Sbjct: 508 AIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALID 567
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MYA+CG I+ + F S D+I WNS+I A HG+AE+AL++F M + +P+ +T
Sbjct: 568 MYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVT 627
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
FVGVLSAC++AG V +G +F+ MK+ Y ++P HY VV+L GR G + A + +
Sbjct: 628 FVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERM 687
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
I+ + VW +LL AC + N ++G A E + +P +SG Y++L+ +Y S G
Sbjct: 688 P---IKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWA 744
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
D + QM +G KE GCSWI++ H F+ HP+ + +L+ L + I+
Sbjct: 745 DVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTSLIK 801
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 152/610 (24%), Positives = 269/610 (44%), Gaps = 54/610 (8%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVI 59
R+++A++LFD+MP R+ V+W +I Y ++G D A+ LF + + F +V+
Sbjct: 68 RLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVL 127
Query: 60 AGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
QS V ++V G+ V+ +V ++I+ Y G +DEA+ VFH +P++
Sbjct: 128 RACTQSKAVSLGEQV-HGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTP 186
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDV---------ASWTIMVNGLVREGRIVEAR 165
V+WN VI +A F MG V A G + GR +
Sbjct: 187 VTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGY 246
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
+ D N++I Y + A LF M R+L SW +I+G + +
Sbjct: 247 A-YRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAE 305
Query: 226 AISYFKQMPE--------TCEKTWNSIISV-LIRNGLVKEAHSYLEKYPYSNIASWTNVI 276
AI+ F M + C NS S+ I G ++ H+++ K N +
Sbjct: 306 AITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQG--RQIHAHVIKADLEADEYVKNAL 363
Query: 277 VGYFEMGE-VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ + E + A VF+ + D +N MI G +N E + F +M+ P
Sbjct: 364 IDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSL 423
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
TF S+L + S ++L +QIH IK + ++A+I +Y++C + A F+
Sbjct: 424 LTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNM 483
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS-ACSYAGLVDQ 454
+ D++ WNS+I G A + E+A++LF ++ L+ P++ TFV +++ A + A +
Sbjct: 484 LHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHG 543
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
+++ +K P ++ ++D+ + G I E L + + W +++
Sbjct: 544 QQFHAWIIKAGVDNDPHVSN--ALIDMYAKCGFIKEGRMLFESTCGEDV----ICWNSMI 597
Query: 515 GACRIHNN----IKVGEIAGERVMELEPNNSGVYLILTEMYLSC---GRREDAKRIFAQM 567
H + ++V + GE E+EPN Y+ + +C G + F M
Sbjct: 598 TTYAQHGHAEEALQVFRLMGE--AEVEPN----YVTFVGVLSACAHAGFVGEGLNHFNSM 651
Query: 568 KENGVKKEPG 577
K N EPG
Sbjct: 652 KSN-YDIEPG 660
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 204/460 (44%), Gaps = 43/460 (9%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D+F N ++ G ++ A+ +FD M R++V+W S+IS Y +G D A+ +F
Sbjct: 52 DLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQ 111
Query: 111 LKDVVSWN-----LVIGALVNCQRMDLAESYFKEMGARD----VASWTIMVNGLVREGRI 161
N V+ A + + L E D V T ++N + G +
Sbjct: 112 KASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCM 171
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
EA +F +P + WN +I GY GC GVA +LF +M I G+ R
Sbjct: 172 DEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMG----------IEGVRPDR 221
Query: 222 RIDAAISYFKQMPETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG 278
+ A S +S G + ++ H Y + S NV++
Sbjct: 222 FVLA-----------------SAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLID 264
Query: 279 -YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + + +A K+F+ M R++ W MI G +N E + F M ++G PD
Sbjct: 265 LYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFA 324
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
TS+L C L + GRQIHA IK V NA+I MYA+C ++ A F ++
Sbjct: 325 CTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALA 384
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
D IS+N++I G + + +A+ +F+RMR +P +TFV +L S ++ +
Sbjct: 385 EDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQ 444
Query: 458 YFDC-MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
+K+ L +A + ++D+ + L+++A + N
Sbjct: 445 IHGLIIKSGTSLDLYAA--SALIDVYSKCSLVNDAKTVFN 482
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 125/551 (22%), Positives = 213/551 (38%), Gaps = 111/551 (20%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------- 48
+ +R+ A+ LFD M R+ V+W MI GY +N F A+ +F M
Sbjct: 268 KCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTS 327
Query: 49 --------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
E D + N +I + +++ A+ VFD + D
Sbjct: 328 ILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDD 387
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
+++N+MI GY N + EA+ +F M + L +L+ LA K++
Sbjct: 388 AISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHG 447
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
+ S T + D+ A + +I Y V A+ +F +
Sbjct: 448 LIIKSGTSL-----------------------DLYAASALIDVYSKCSLVNDAKTVFNML 484
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISV---LIRNGL 253
H +D+ W +I G + + + AI F Q+ P E T+ ++++V L
Sbjct: 485 HYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPN--EFTFVALVTVASTLASMFH 542
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
++ H+++ K N +N ++ Y + G + +FE DV WN MI +
Sbjct: 543 GQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQ 602
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
+ EE L+ F M E+ P+ TF VL+ C+ HA + N F
Sbjct: 603 HGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACA-----------HAGFVGEGLNHF--- 648
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
N+M + Y +I+ + ++SV + G A E ERM +
Sbjct: 649 -NSMKSNY----DIEPGIEHYASV-----------VNLFGRSGKLHAAKEFIERMPI--- 689
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR-SAHYTCVVDLLGRFGLIDEA 491
KP + +LSAC G + GRY + P S Y + ++ GL +
Sbjct: 690 KPAAAVWRSLLSACHLFGNAEIGRY---AAEMALLADPTDSGPYVLLSNIYASKGLWADV 746
Query: 492 MNLLNEIRADG 502
NL ++ + G
Sbjct: 747 HNLRQQMDSSG 757
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 107/277 (38%), Gaps = 41/277 (14%)
Query: 330 GPSPDNATFTSVLTICSDLPT-----LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
PS + VL C LPT L IHA+A R ++N ++ Y+ G
Sbjct: 10 APSTHIRSLARVLLSC--LPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLG 67
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK-PDDITFVGVL 443
++ A F +P +++SW S+I HG + A+ LF + + P++ VL
Sbjct: 68 RLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVL 127
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM----------- 492
AC+ + V G + K L T +++L + G +DEAM
Sbjct: 128 RACTQSKAVSLGEQVHG-IAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTP 186
Query: 493 --------------------NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGE 531
L + + +G+ V + + AC ++ G +I G
Sbjct: 187 VTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGY 246
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
++ V +L ++Y C R A+++F M+
Sbjct: 247 AYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCME 283
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 204/693 (29%), Positives = 339/693 (48%), Gaps = 97/693 (13%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAM---CLF-------------------NQMP- 48
+ +++ V WN++IR + K G LD+A+ C ++P
Sbjct: 73 VLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPS 132
Query: 49 ----------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR---DVVTWNSM 89
E ++F N ++A + +++ A +FD + R DV++WNS+
Sbjct: 133 YRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSI 192
Query: 90 ISGYVCNGLIDEALRVFHGMPL----------KDVVSWNLVIGALVNC-------QRMDL 132
+S +V + AL +F M L D++S ++ L C Q ++
Sbjct: 193 VSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS---IVNILPACGSLKAVPQTKEV 249
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
+ + DV +++ + G + A K+F+ M KDV +WN M+AGY +G
Sbjct: 250 HGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNF 309
Query: 193 GVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCE-KTWNSIISV 247
A +LF+ M D+ +W +I G A++ F+QM + +IISV
Sbjct: 310 KAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISV 369
Query: 248 LIRNGLVKEAHSYLEKYPYS-----------------NIASWTNVIVGYFEMGEVGSAIK 290
L + +E + YS ++ + +I Y + +A
Sbjct: 370 LSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARS 429
Query: 291 VFE--LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM--KESGPSPDNATFTSVLTICS 346
+F+ + R+V W VMI G + + LK FV+M + G +P+ T + +L C+
Sbjct: 430 IFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACA 489
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTT----VSNAMITMYARCGNIQSALLEFSSVPIHDII 402
L + +G+QIHA ++ +Q+ + V+N +I MY++CG++ +A F S+ I
Sbjct: 490 HLAAIRIGKQIHAYVLR--HHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAI 547
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
SW S++ G HG +AL++F++MR F PDDITF+ VL ACS+ G+VDQG YFD M
Sbjct: 548 SWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSM 607
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
Y L PR+ HY +DLL RFG +D+A + ++ +E + VW ALL ACR+H+N
Sbjct: 608 SADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMP---MEPTAVVWVALLSACRVHSN 664
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
+++ E A +++E+ N G Y +++ +Y + GR +D RI MK++G+KK PGCSW+Q
Sbjct: 665 VELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 724
Query: 583 INDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
G F GD SHP ++ LL L I+
Sbjct: 725 GQKGTASFFVGDRSHPLSPQIYALLESLIDRIK 757
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/529 (23%), Positives = 229/529 (43%), Gaps = 66/529 (12%)
Query: 47 MPERDMFTYNTVIAGLMQSDNVQGAKE----VFDGMEVRDVVTWNSMISGYVCNGLIDEA 102
+P + ++ G++ S GA + V + + V WN +I ++ G +D A
Sbjct: 42 LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 101
Query: 103 L----RVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV-- 156
+ R+ D + V+ A ++ + S + N LV
Sbjct: 102 INVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAM 161
Query: 157 --REGRIVEARKLFDKMPAK---DVQAWNLMIAGYLDNGCVGVAEDLFQKM----HDRDL 207
R G + EA +FD++ + DV +WN +++ ++ + A DLF KM H++
Sbjct: 162 YSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPT 221
Query: 208 TSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI--------------ISVLIRNGL 253
+I+ +VN I A K +P+T E N+I I + GL
Sbjct: 222 NERSDIIS-IVN---ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGL 277
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR----DVTVWNVMIFG 309
++ A + ++ SW ++ GY + G +A ++F+ M D+ W +I G
Sbjct: 278 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAG 337
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK----IA 365
+ E L F QM SG P+ T SVL+ C+ L G +IHA ++K
Sbjct: 338 YSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTL 397
Query: 366 RNQF------TTVSNAMITMYARCGNIQSALLEFSSVPIHD--IISWNSIICGLAYHGYA 417
N F V NA+I MY++C + ++A F +P+ + +++W +I G A +G +
Sbjct: 398 DNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDS 457
Query: 418 EKALELFERMRLTDF--KPDDITFVGVLSACSYAGLVDQGR--YYFDCMKNKYFLQPRSA 473
AL+LF M + P+ T +L AC++ + G+ + + ++Y SA
Sbjct: 458 NDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQY---DSSA 514
Query: 474 HYT--CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
++ C++++ + G +D A ++ + + + S W +++ +H
Sbjct: 515 YFVANCLINMYSKCGDVDTARHVFDSMS----QKSAISWTSMMTGYGMH 559
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 137/320 (42%), Gaps = 25/320 (7%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T V+ Y G A+ V E +T WN++I + + + +M +G
Sbjct: 55 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 114
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMYARCGNIQSA 389
D+ T VL C +LP+ G H I N F + + NA++ MY+RCG+++ A
Sbjct: 115 LDHFTLPHVLKACGELPSYRCGSAFHGL---ICCNGFESNVFICNALVAMYSRCGSLEEA 171
Query: 390 LLEFSSVP---IHDIISWNSIICGLAYHGYAEKALELFERMRL------TDFKPDDITFV 440
+ F + I D+ISWNSI+ A AL+LF +M L T+ + D I+ V
Sbjct: 172 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 231
Query: 441 GVLSACSYAGLVDQGR-YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+L AC V Q + + + ++N FL + ++D + GL++ A+ + N +
Sbjct: 232 NILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGN--ALIDAYAKCGLMENAVKVFNMME 289
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
+ W A++ N K E+ E P + + + Y G
Sbjct: 290 FKDV----VSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 345
Query: 559 DAKRIFAQMKENGVKKEPGC 578
+A +F QM +G P C
Sbjct: 346 EALNVFRQMIFSG--SLPNC 363
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 152/374 (40%), Gaps = 76/374 (20%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
++ A +F+ M +D V+WN M+ GY ++G A LF M + DM T+ VIAG
Sbjct: 278 MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAG 337
Query: 62 LMQSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----- 112
Q A VF M + + VT S++S G + + + H LK
Sbjct: 338 YSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEI-HAYSLKNCLLT 396
Query: 113 ----------DVVSWNLVIGALVNCQRMDLAESYFKE--MGARDVASWTIMVNGLVREGR 160
D++ +N +I C+ A S F + + R+V +WT+M+ G + G
Sbjct: 397 LDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD 456
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+A KLF +M + + + + Y + C+ L H + KQ+ ++
Sbjct: 457 SNDALKLFVEMIS---EPYGVAPNAYTIS-CI-----LMACAHLAAIRIGKQIHAYVLRH 507
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
+ D++ +YF N +I++ + G V A + + SWT+++ GY
Sbjct: 508 HQYDSS-AYFVA---------NCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGY- 556
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
G + G E L F +M+++G PD+ TF
Sbjct: 557 ------------------------------GMHGRGSEALDIFDKMRKAGFVPDDITFLV 586
Query: 341 VLTICSDLPTLDLG 354
VL CS +D G
Sbjct: 587 VLYACSHCGMVDQG 600
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 16/181 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+ A+++FD M Q+ ++W M+ GY +G A+ +F++M + D T+ V+
Sbjct: 531 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 590
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN-----GLIDEALRVFHGMPLKDV-V 115
V FD M +T + Y + G +D+A + MP++ V
Sbjct: 591 CSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAV 650
Query: 116 SWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGR---IVEARKLFD 169
W ++ A ++LAE EM A + S+T++ N GR + R L
Sbjct: 651 VWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMK 710
Query: 170 K 170
K
Sbjct: 711 K 711
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 178/540 (32%), Positives = 287/540 (53%), Gaps = 21/540 (3%)
Query: 86 WNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
WN++I Y EA+ + M D + +LV+ A C R+ L + + G
Sbjct: 95 WNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTLSLVLKA---CSRVGLVKEGMQIHG 151
Query: 142 -------ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
D+ +++ V+ G +V A ++FD+MP +D ++N MI GY+ G + +
Sbjct: 152 LLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDL 211
Query: 195 AEDLFQ--KMHDRDLTSWKQLINGLVNSRR-IDAAISYFKQMPETCEKTWNSIISVLIRN 251
A +F + +R+L SW LI G S I A F +MPE +WNS+I ++
Sbjct: 212 ARVVFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFAKMPERDLISWNSMIDGCVKC 271
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
G +++A ++ P +I SW N+I GY + G V A +F+ M RDV +N M+ G
Sbjct: 272 GRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYV 331
Query: 312 ENDLGEEGLKFFVQMKESGPSP-DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+N E L F M+ G DNAT L+ + L +D G IH +I +
Sbjct: 332 QNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDG 391
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
+ A+I MY++CG+I++A++ F ++ + WN+II GLA HG E A + M
Sbjct: 392 RLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEMERM 451
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
+PDDITF+G+L+AC +AGLV +G F+ M+ + ++P+ HY C+VD+LGR G I+E
Sbjct: 452 RVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIEE 511
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
A N + E+ E + +W +LL AC+ H + VG+ E +M L+ + Y++ + M
Sbjct: 512 AKNFVEEMP---FEPNDVIWRSLLSACKTHESFNVGQPVAENLMRLDSPSPSSYVLASNM 568
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
Y G+ D +++ A MK+ +KK PGCSWI++ + F D SHP+F + +L+ L
Sbjct: 569 YAGLGKWNDVRKVRAMMKQKNLKKIPGCSWIELEGHVYAFFVQDKSHPQFSGIYSILDSL 628
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 219/458 (47%), Gaps = 37/458 (8%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGLMQSDNVQGAKEVF 75
D T +++++ + G + M + + + D+F N +I+ ++ + A +VF
Sbjct: 126 DKFTLSLVLKACSRVGLVKEGMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVF 185
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL--KDVVSWNLVIGALVNCQR-MDL 132
D M RD V++NSMI GYV G ID A VF +PL ++++SWN +I + + +
Sbjct: 186 DRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDGILV 245
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A F +M RD+ SW M++G V+ GR+ +A+ LFD+MP +D+ +W MI GY NG V
Sbjct: 246 AWQLFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRV 305
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSIISV 247
+A LF +M +RD+ ++ ++ G V + A+ F M T +S
Sbjct: 306 DIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSA 365
Query: 248 LIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVW 303
+ + G + + H ++E+ +S ++ Y + G + +A+ VFE + + V W
Sbjct: 366 IAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHW 425
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLGRQ 356
N +I GL + LGE F ++M+ PD+ TF +L C + +L R+
Sbjct: 426 NAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRR 485
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYH 414
+H K+ M+ + R G+I+ A +P +D+I W S++ H
Sbjct: 486 VHKVEPKLQH------YGCMVDILGRAGHIEEAKNFVEEMPFEPNDVI-WRSLLSACKTH 538
Query: 415 GYAEKALELFER-MRLTDFKPDDITFVGVLSACSYAGL 451
+ E MRL P VL++ YAGL
Sbjct: 539 ESFNVGQPVAENLMRLDSPSPSSY----VLASNMYAGL 572
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 194/400 (48%), Gaps = 31/400 (7%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDMFTYNTVIAGLMQS- 65
A +FD+MP+RD+V++N MI GY K G +D A +F+ +P ER++ ++N++I G QS
Sbjct: 181 ASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSE 240
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D + A ++F M RD+++WNSMI G V G +++A +F MP +D+VSW +I
Sbjct: 241 DGILVAWQLFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYA 300
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD---VQAWNLM 182
R+D+A S F EM RDV ++ M+ G V+ G +EA +F M + + L+
Sbjct: 301 KNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLL 360
Query: 183 IA-------GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
IA G++D G V + + + D LI+ I+ A+ F+ + E
Sbjct: 361 IALSAIAQLGHIDKG-VAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKE 419
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF----EMGEVGSAIKV 291
WN+II L +GL + A +L + + +G G V +
Sbjct: 420 KSVDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMC 479
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEG----LKFFVQMKESGPSPDNATFTSVLTICSD 347
FELM + +G + LG G K FV+ E P++ + S+L+ C
Sbjct: 480 FELMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVE--EMPFEPNDVIWRSLLSACKT 537
Query: 348 LPTLDLGRQIHAQAIKI---ARNQFTTVSNAMITMYARCG 384
+ ++G+ + +++ + + + SN MYA G
Sbjct: 538 HESFNVGQPVAENLMRLDSPSPSSYVLASN----MYAGLG 573
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 136/295 (46%), Gaps = 50/295 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ R+++AQ LFD+MP RD V+W MI GY KNG +D A LF++MPERD+ YN ++
Sbjct: 269 VKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMG 328
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP-----LKDVV 115
G YV NG EAL +F+GM L D
Sbjct: 329 G-------------------------------YVQNGYCMEALGIFYGMQSDGNFLLDNA 357
Query: 116 SWNLVIGALVNCQRMDLA---ESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKM 171
+ + + A+ +D + +E+G + D +++ + G I A +F+ +
Sbjct: 358 TLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENI 417
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAI 227
K V WN +I G +G +A D +M + D ++ L+N ++ + +
Sbjct: 418 KEKSVDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGM 477
Query: 228 SYFKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVI 276
F+ M E + + ++ +L R G ++EA +++E+ P+ N W +++
Sbjct: 478 MCFELMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLL 532
>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 713
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 198/662 (29%), Positives = 331/662 (50%), Gaps = 79/662 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNA---MCLFNQMPERDMFTYNTV 58
+ ++ +A ++F+ + +D V+WN +I GY +NG + ++ M LF +M +D+
Sbjct: 63 KCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYT 122
Query: 59 IAGLMQSDNV--------QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
+AG+ ++++ Q V D+ S++ G C + V++G
Sbjct: 123 LAGIFKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLV-GMYCKAGLKYLYMVYYGFW 181
Query: 111 L---KDVVSWNL------------------VIGALVNCQRMDLAESYFKEMGARDVASWT 149
L KDV+ L V A+++ LA + + +G R + T
Sbjct: 182 LCYKKDVLRRQLKSSICFLEEKEKESDSDYVFTAVLS----SLAATVYVGLG-RQIHGIT 236
Query: 150 I---------MVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
+ + N LV + + EA K+FD ++ W+ M+ GY NG A
Sbjct: 237 VKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAI 296
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
LF +M + + I G++N+ C S I L+ K+
Sbjct: 297 KLFSRMFSAGIKPSEYTIVGVLNA----------------C-----SDICYLVEG---KQ 332
Query: 257 AHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
HS+L K + ++ + T ++ Y + G + A K F+ + RDV +W +I G +N
Sbjct: 333 LHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSD 392
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
EE L + +MK +G P++ T SVL CS L TL+LG+Q+H IK + +A
Sbjct: 393 NEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSA 452
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
+ TMY +CG+++ L F P D++SWN++I GL+++G ++ALELFE M +PD
Sbjct: 453 LSTMYTKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPD 512
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
D+TFV ++SACS+ G V++G YF M +++ L P+ HY C+VD+L R G + E
Sbjct: 513 DVTFVNIISACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRAGQLKETKEF- 571
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
I + I+ +W LL AC+ H N ++G AGE++M L S Y+ L +Y + G
Sbjct: 572 --IESASIDHGLCLWRILLSACKNHGNCELGVYAGEKLMSLGSRESSTYVQLAGIYTALG 629
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
R D +R++ M+ NGV KE GCSWI + + HVF+ GD+ HP+ + L++L+ ++
Sbjct: 630 RMRDVERVWKLMRTNGVSKEVGCSWIALKNQWHVFVVGDTMHPRIEETKDLVSLVSRQML 689
Query: 616 RE 617
E
Sbjct: 690 EE 691
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 206/482 (42%), Gaps = 64/482 (13%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESY-----FKEMG 141
N +++ Y G + +A +F+ + KDVVSWN +I Q ++ S+ F+EM
Sbjct: 55 NVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGY--SQNGGISSSHTVMQLFREMR 112
Query: 142 ARDVASWTIMVNGLVRE---------GRIVEARKLFDKMPA-KDVQAWNLMIAGYLDNGC 191
A+D+ + G+ + GR +A L KM + D+ ++ Y C
Sbjct: 113 AQDILPNAYTLAGIFKAESSLQSCTVGR--QAHALVVKMSSFGDIYVDTSLVGMY----C 166
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF--KQMPETCEKTWNSIISVL- 248
+ L+ + L K ++ R++ ++I + K+ + + +++S L
Sbjct: 167 KAGLKYLYMVYYGFWLCYKKDVLR-----RQLKSSICFLEEKEKESDSDYVFTAVLSSLA 221
Query: 249 --IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE-VGSAIKVFELMTTRDVTVWNV 305
+ GL ++ H K + +N +V + E + A K+F+ R+ W+
Sbjct: 222 ATVYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSA 281
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
M+ G +N E +K F +M +G P T VL CSD+ L G+Q+H+ +K+
Sbjct: 282 MVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLG 341
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
+ + A++ MYA+ G + A F + D+ W S+I G + E+AL L+
Sbjct: 342 FERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYR 401
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQGR-YYFDCMKNKYFLQ-----PRSAHYT--- 476
RM+ P+D T VL ACS ++ G+ + +K+ + L+ S YT
Sbjct: 402 RMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTKCG 461
Query: 477 ---------------------CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
++ L G DEA+ L E+ A+G E + ++
Sbjct: 462 SLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIIS 521
Query: 516 AC 517
AC
Sbjct: 522 AC 523
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
E P +T LT S L GR +HAQ I+ + T +N ++ YA+CG +
Sbjct: 9 EINPFSHTSTLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLA 68
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHG---YAEKALELFERMRLTDFKPDDITFVGVLS 444
A F+++ D++SWNS+I G + +G + ++LF MR D P+ T G+
Sbjct: 69 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFK 128
Query: 445 A 445
A
Sbjct: 129 A 129
>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
Length = 681
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 185/629 (29%), Positives = 307/629 (48%), Gaps = 53/629 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R + +A LFD+MP R+ +WN MI GY K+G + ++ LF+ M ++ +++N V +G
Sbjct: 53 RCGSMTDAHKLFDEMPHRNCFSWNTMIEGYMKSGNKERSIRLFDMMSNKNDYSWNVVFSG 112
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-------DV 114
++ ++ A+ +F+ M R+ V WNSMI Y NG EA+R+F + L D
Sbjct: 113 FAKAGEMEIARRLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLFKELNLDPLDKSCCDT 172
Query: 115 VSWNLVIGA-------------------------------LVN----CQRMDLAESYFKE 139
VIGA L+N C +D A
Sbjct: 173 FVLATVIGACTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNT 232
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
M D S + ++ G GR+ +AR+ F + V WN +I+GY+ N A LF
Sbjct: 233 MEEPDDFSLSALITGYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLF 292
Query: 200 QKMHDR----DLTSWKQLING---LVNSRRIDAAISYFKQMPETCEKTWNS-IISVLIRN 251
M + D ++ +++ L NS+ +Y ++ C+ S I +
Sbjct: 293 NDMQKKGLKVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKC 352
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
G + +A + + ++I Y G++ A ++F M ++ + WN MI GL
Sbjct: 353 GSLNDACKLFSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLS 412
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+N E L F M + + TSV++ C+ + +L+LG QI A+A + +
Sbjct: 413 QNGCPVEALDLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQIFARATVVGLDSDEV 472
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
+S +++ Y +CG I+ F ++ D ISWNS++ G A +G+ +AL LF MR
Sbjct: 473 ISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMGYATNGHGLEALTLFNEMRHAG 532
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
+P +ITF GVLSAC + GLV +G +F+ M+ Y + P HY+C+VDL R G ++EA
Sbjct: 533 VRPTEITFTGVLSACDHCGLVKEGWRWFNIMQYDYHIDPGIEHYSCMVDLFARAGCLEEA 592
Query: 492 MNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMY 551
MNL+ + E ++W ++L C H +GE ++++EL+P NSG Y+ L+ ++
Sbjct: 593 MNLIKRMP---FEADASMWSSVLRGCMAHGEKDLGEKVAQQIIELDPENSGAYVQLSSIF 649
Query: 552 LSCGRREDAKRIFAQMKENGVKKEPGCSW 580
+ G E + + M+E V+K PG SW
Sbjct: 650 ATSGDWESSALVRKVMQERQVQKYPGYSW 678
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 140/360 (38%), Gaps = 76/360 (21%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N ++ Y G + A LF +M R+ SW +I G + S + +I F M +
Sbjct: 45 NRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMIEGYMKSGNKERSIRLFDMMSNKNDY 104
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+WN + S G+ + GE+ A ++F M R+
Sbjct: 105 SWNVVFS-------------------------------GFAKAGEMEIARRLFNEMPNRN 133
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP------DNATFTSVLTICSDLPTLDL 353
VWN MI N E ++ F KE P D +V+ C+DL +
Sbjct: 134 GVVWNSMIHSYARNGSPREAVRLF---KELNLDPLDKSCCDTFVLATVIGACTDLGEIQC 190
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD------------- 400
G+QIHA+ + + +++++I +Y +CG++ SA +++ D
Sbjct: 191 GKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSLSALITGYAN 250
Query: 401 ------------------IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
++ WNS+I G + +A LF M+ K D T +
Sbjct: 251 HGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATI 310
Query: 443 LSACSYAGLVDQGR--YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
LSACS G+ + + C K L + + +D + G +++A L +E++
Sbjct: 311 LSACSSLCNSQHGKQMHAYAC---KVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKT 367
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 354 GRQIHAQAIKIARNQFT-TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
G+Q+H K Q T +++N ++ MY RCG++ A F +P + SWN++I G
Sbjct: 24 GKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMIEGYM 83
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
G E+++ LF+ M +D ++ V S + AG ++ R F+ M N+
Sbjct: 84 KSGNKERSIRLFDMMS----NKNDYSWNVVFSGFAKAGEMEIARRLFNEMPNR-----NG 134
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT---VWGALLGACRIHNNIKVGEIA 529
+ ++ R G EA+ L E+ D ++ S V ++GAC I+ G+
Sbjct: 135 VVWNSMIHSYARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGACTDLGEIQCGKQI 194
Query: 530 GERV----MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
R+ MEL+ S + L +Y CG + A + M+E
Sbjct: 195 HARILIDNMELD---SVLTSSLINLYGKCGDLDSAHCVLNTMEE 235
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 194/634 (30%), Positives = 315/634 (49%), Gaps = 64/634 (10%)
Query: 24 WNVMIRGYFKNGFLDNAMCLFNQM------PER--------------------------- 50
+N +IRGY G D A+ L+ QM P++
Sbjct: 98 YNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVL 157
Query: 51 ------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALR 104
D+F N++I + V +++FDGM R+VV+W S+I+GY L EA+
Sbjct: 158 KMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVS 217
Query: 105 VFHGMPLKDV----VSWNLVIGALVNCQRMDLAE---SYFKEMGARDVASWTIMVNGLV- 156
+F M V V+ VI A + ++L + SY E+G + TIMVN LV
Sbjct: 218 LFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELG---MELSTIMVNALVD 274
Query: 157 ---REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN----GCVGVAEDLFQKMHDRDLTS 209
+ G I AR++FD+ K++ +N +++ Y+ + + + +++ QK D +
Sbjct: 275 MYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVT 334
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTW----NSIISVLIRNGLVKEAHSYLEKYP 265
I + S + + W N+II + ++ G + A E P
Sbjct: 335 MLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMP 394
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
+ +W ++I G G++ A ++F+ M RD+ WN MI L + + EE ++ F +
Sbjct: 395 NKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFRE 454
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ G D T + + C L LDL + + K + + A++ M++RCG+
Sbjct: 455 MQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGD 514
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
SA+ F + D+ +W + I +A G E A+ELF M KPDD+ FV +L+A
Sbjct: 515 PSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTA 574
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
CS+ G VDQGR F M+ + ++P HY C+VDLLGR GL++EA++L I++ IE
Sbjct: 575 CSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDL---IQSMPIEP 631
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
+ VWG+LL ACR H N+++ A E++ +L P G++++L+ +Y S G+ D R+
Sbjct: 632 NDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRL 691
Query: 566 QMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
QMKE GV+K PG S I++ H F SGD SH +
Sbjct: 692 QMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAE 725
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 216/503 (42%), Gaps = 69/503 (13%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-------------- 49
++ + LFD M +R+ V+W +I GY A+ LF QM E
Sbjct: 179 GKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVI 238
Query: 50 ------------RDMFTY-------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
+ + +Y N ++ M+ ++ A+++FD +++V
Sbjct: 239 SACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLV 298
Query: 85 TWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
+N+++S YV + + L + M P D V+ I A + + +S +
Sbjct: 299 MYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYV 358
Query: 141 GARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
+ W + N ++ + G+ A K+F+ MP K V WN +IAG + +G + +A
Sbjct: 359 LRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAW 418
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNG 252
+F +M +RDL SW +I LV + AI F++M T I S G
Sbjct: 419 RIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLG 478
Query: 253 ---LVKEAHSYLEKYP-YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
L K +Y+EK + ++ T ++ + G+ SA+ VF+ M RDV+ W I
Sbjct: 479 ALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIG 538
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI-----HAQAIK 363
+ E ++ F +M E PD+ F ++LT CS ++D GRQ+ A I+
Sbjct: 539 VMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIR 598
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYHGYAEKAL 421
+ M+ + R G ++ A+ S+PI +D++ W S++ H E L
Sbjct: 599 PHIVHY----GCMVDLLGRAGLLEEAVDLIQSMPIEPNDVV-WGSLLAACRKHKNVE--L 651
Query: 422 ELFERMRLTDFKPDDITFVGVLS 444
+ +LT P+ + +LS
Sbjct: 652 AHYAAEKLTQLAPERVGIHVLLS 674
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 137/304 (45%), Gaps = 35/304 (11%)
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
++N +I G LG++ + +VQM G PD TF +L+ CS + L G Q+H
Sbjct: 97 MYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAV 156
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
+K+ VSN++I YA CG + F + +++SW S+I G + +++A+
Sbjct: 157 LKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAV 216
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
LF +M +P+ +T V V+SAC+ ++ G+ + ++ ++ + +VD+
Sbjct: 217 SLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYI-SELGMELSTIMVNALVDM 275
Query: 482 LGRFG-------LIDEAMN------------------------LLNEIRADGIEVSPTVW 510
+ G + DE N +L+E+ G
Sbjct: 276 YMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTM 335
Query: 511 GALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+ + AC ++ VG+ + V+ LE ++ + + +MY+ CG+RE A ++F M
Sbjct: 336 LSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDN-ISNAIIDMYMKCGKREAACKVFEHMP 394
Query: 569 ENGV 572
V
Sbjct: 395 NKTV 398
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 146/321 (45%), Gaps = 36/321 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ + + A +F+ MP + VTWN +I G ++G ++ A +F++M ERD+ ++NT+I
Sbjct: 378 MKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIG 437
Query: 61 GLMQSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
L+Q + A E+F M+ + D VT + S G +D A V + D +
Sbjct: 438 ALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKND-IH 496
Query: 117 WNLVIG-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
+L +G ALV+ C A FK M RDV++WT + + EG A +LF++M
Sbjct: 497 VDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEM 556
Query: 172 PAKDVQAWNLMIAGYL----DNGCVGVAEDLFQKMHDR-----DLTSWKQLINGLVNSRR 222
+ V+ +++ L G V LF M + + +++ L +
Sbjct: 557 LEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGL 616
Query: 223 IDAAISYFKQMP-ETCEKTWNSIISVLIRNGLVKEAHSYLEKYP---------------- 265
++ A+ + MP E + W S+++ ++ V+ AH EK
Sbjct: 617 LEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNI 676
Query: 266 YSNIASWTNVIVGYFEMGEVG 286
Y++ WT+V +M E G
Sbjct: 677 YASAGKWTDVARVRLQMKEKG 697
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 122/285 (42%), Gaps = 56/285 (19%)
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMITMYAR 382
+KE+ P N++ + +L C L L +Q+H +K + ++ + N +I +
Sbjct: 16 SLKEANPITRNSS-SKLLVNCKTLKEL---KQLHCDMMKKGLLCHKPASNLNKLIASSVQ 71
Query: 383 CGNIQSALLEFSSVPIHD-------IISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
G ++S L+++ D + +N +I G A G ++A+ L+ +M + PD
Sbjct: 72 IGTLES--LDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPD 129
Query: 436 DITFVGVLSACS---------------------------------YA--GLVDQGRYYFD 460
TF +LSACS YA G VD GR FD
Sbjct: 130 KYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFD 189
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
M L+ +T +++ L EA++L ++ G+E +P ++ AC
Sbjct: 190 GM-----LERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKL 244
Query: 521 NNIKVGEIAGERVMELEPNNSGVYL-ILTEMYLSCGRREDAKRIF 564
++++G+ + EL S + + L +MY+ CG A++IF
Sbjct: 245 KDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIF 289
>gi|15228064|ref|NP_181235.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206293|sp|Q9SJK9.1|PP189_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g36980, mitochondrial; Flags: Precursor
gi|4883614|gb|AAD31583.1| hypothetical protein [Arabidopsis thaliana]
gi|330254236|gb|AEC09330.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 625
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 180/613 (29%), Positives = 302/613 (49%), Gaps = 51/613 (8%)
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV---- 114
IA L +S + A++VFDGM D V WN+M++ Y GL EA+ +F + D
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 115 ---------------VSWNLVIGALV--------------------NCQRMDLAESYFKE 139
V + I +LV C A F++
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 140 M--GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
M +R+ +W ++ + + A +F +MP + AWN+MI+G+ G +
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC--EKTW-------NSIISVL 248
LF++M + + + L+N+ D++ + +M + W NS++S
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFY 250
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+ G +A LE SW ++I ++GE A++VF L +++ W MI
Sbjct: 251 TKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMIT 310
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
G G N GE+ L+FFV+M +SG D+ + +VL CS L L G+ IH I
Sbjct: 311 GYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQG 370
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
+ V NA++ +YA+CG+I+ A F + D++SWN+++ HG A++AL+L++ M
Sbjct: 371 YAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMI 430
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
+ KPD++TF+G+L+ CS++GLV++G F+ M Y + H TC++D+ GR G +
Sbjct: 431 ASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHL 490
Query: 489 DEAMNLLNEIRADGIEVS-PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLIL 547
EA +L + + S + W LLGAC H + ++G + + EP+ +++L
Sbjct: 491 AEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLL 550
Query: 548 TEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
+ +Y S GR ++ + + +M E G+KK PGCSWI++ + F+ GDSSHP+ L L
Sbjct: 551 SNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETL 610
Query: 608 NLLHTEIEREILF 620
N L E+ F
Sbjct: 611 NCLQHEMRNPETF 623
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 146/339 (43%), Gaps = 46/339 (13%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T+ I + G + SA +VF+ M D WN M+ L +E + F Q++ S
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN------- 385
PD+ +FT++L+ C+ L + GR+I + I+ V+N++I MY +C +
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 386 --------------------------IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
++AL F +P +WN +I G A+ G E
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSY-AGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
L LF+ M ++FKPD TF +++ACS + V GR M + A + V
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNS-V 246
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE-RVMELE 537
+ + G D+AM L I ++ W +++ AC +K+GE V L
Sbjct: 247 LSFYTKLGSRDDAMRELESIEV----LTQVSWNSIIDAC-----MKIGETEKALEVFHLA 297
Query: 538 PNNSGV-YLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
P + V + + Y G E A R F +M ++GV +
Sbjct: 298 PEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSD 336
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 191/456 (41%), Gaps = 72/456 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
M + + A ++F +MP+R WN+MI G+ G L++ + LF +M E D +T++
Sbjct: 149 MNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFS 208
Query: 57 TVI-AGLMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+++ A S NV + V M V NS++S Y G D+A+R + +
Sbjct: 209 SLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEV 268
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
VSWN +I A + + A F +++ +WT M+ G R G +A + F +M
Sbjct: 269 LTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEM 328
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
V + + L + C G+A L ++I+G +
Sbjct: 329 MKSGVDSDHFAYGAVL-HACSGLA-----------LLGHGKMIHGCL------------- 363
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIK 290
H + Y Y N +V Y + G++ A +
Sbjct: 364 -------------------------IHCGFQGYAYVG-----NALVNLYAKCGDIKEADR 393
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
F + +D+ WN M+F G + L ++ LK + M SG PDN TF +LT CS
Sbjct: 394 AFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGL 453
Query: 351 LDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSA---LLEFSSVPI--HDIISW 404
++ G I +K R MI M+ R G++ A +SS+ + SW
Sbjct: 454 VEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSW 513
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+++ + H + E E+ + +++ + ++++FV
Sbjct: 514 ETLLGACSTHWHTELGREVSKVLKIAE-PSEEMSFV 548
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 165/419 (39%), Gaps = 57/419 (13%)
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----- 203
T + L + GRI AR++FD MP D AWN M+ Y G A LF ++
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 204 --DRDLTSWKQLINGLVN---SRRIDAAI---SYFKQMPETCEKTWNSIISVLIRNGLVK 255
D T+ L N R+I + + + +P NS+I + +
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVN-----NSLIDMYGKCSDTL 122
Query: 256 EAHSYLEKY--PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
A+ N +W +++ Y + +A+ VF M R WN+MI G
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICS-DLPTLDLGRQIHAQAIKIARNQFTTV 372
E L F +M ES PD TF+S++ CS D + GR +HA +K +
Sbjct: 183 GKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEA 242
Query: 373 SNAMITMYARCGNIQSALLEFSSV-------------------------------PIHDI 401
N++++ Y + G+ A+ E S+ P +I
Sbjct: 243 KNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNI 302
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
++W ++I G +G E+AL F M + D + VL ACS L+ G+ C
Sbjct: 303 VTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGC 362
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
+ + F Q + +V+L + G I EA +I + W +L A +H
Sbjct: 363 LIHCGF-QGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDL----VSWNTMLFAFGVH 416
>gi|2245038|emb|CAB10457.1| hypothetical protein [Arabidopsis thaliana]
gi|7268435|emb|CAB80955.1| hypothetical protein [Arabidopsis thaliana]
Length = 851
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 177/521 (33%), Positives = 272/521 (52%), Gaps = 67/521 (12%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA 146
N +I+ V +G ID ALRVFHGM K+ +
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTI------------------------------- 93
Query: 147 SWTIMVNGLVRE-GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
+W ++ G+ ++ R++EA +LFD++P D ++N+M++ Y+ N A+ F +M +
Sbjct: 94 TWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK 153
Query: 206 DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
D SW +I G ++ A F M E E +WN++IS I G +++A + + P
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAP 213
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELMTT-RDVTVWNVMIFGLGENDLGEEGLKFFV 324
+ +WT +I GY + +V A +F+ MT +++ WN MI G EN E+GLK F
Sbjct: 214 VRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFR 273
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
M E G P+++ +S L C+ ++I+MY +CG
Sbjct: 274 AMLEEGIRPNSSGLSSALLGCT--------------------------LTSLISMYCKCG 307
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+ A F + D+++WN++I G A HG A+KAL LF M +PD ITFV VL
Sbjct: 308 ELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLL 367
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
AC++AGLV+ G YF+ M Y ++P+ HYTC+VDLLGR G ++EA+ L IR+
Sbjct: 368 ACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKL---IRSMPFR 424
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
V+G LLGACR+H N+++ E A E++++L N+ Y+ L +Y S R ED R+
Sbjct: 425 PHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVR 484
Query: 565 AQMKENGV-----KKEPGCSWIQINDGGHVFLSGDSSHPKF 600
+MKE+ V K PG SWI+I + H F S D HP+
Sbjct: 485 KRMKESNVVKVERVKVPGYSWIEIRNKVHHFRSSDRIHPEL 525
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 190/369 (51%), Gaps = 28/369 (7%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN-GLIDEALRVFHGMP 110
+F N +IA ++S ++ GA VF GM ++ +TWNS++ G + + EA ++F +P
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP 120
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
D S+N+++ V + A+S+F M +D ASW M+ G R G + +AR+LF
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
M K+ +WN MI+GY++ G + A F+ R + +W +I G + +++++ A + F
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMF 240
Query: 231 KQMPETCEK---TWNSIISVLIRNGLVKEA----HSYLEKYPYSNIASWTNVIVG----- 278
K M T K TWN++IS + N ++ + LE+ N + ++ ++G
Sbjct: 241 KDM--TVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCTLTS 298
Query: 279 ----YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
Y + GE+G A K+FE+M +DV WN MI G ++ ++ L F +M ++ PD
Sbjct: 299 LISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPD 358
Query: 335 NATFTSVLTICSDLPTLDLG-----RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
TF +VL C+ +++G + ++ + +T M+ + R G ++ A
Sbjct: 359 WITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYT----CMVDLLGRAGKLEEA 414
Query: 390 LLEFSSVPI 398
L S+P
Sbjct: 415 LKLIRSMPF 423
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 176/357 (49%), Gaps = 41/357 (11%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+R+ EA LFD++P+ DT ++N+M+ Y +N + A F++MP +D ++NT+I G
Sbjct: 107 SRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYA 166
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
+ ++ A+E+F M ++ V+WN+MISGY+ G +++A F P++ VV+W +I
Sbjct: 167 RRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITG 226
Query: 124 LVNCQRMDLAESYFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ----- 177
+ ++++LAE+ FK+M +++ +W M++G V R + KLF M + ++
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 178 --------AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+I+ Y G +G A LF+ M +D+ +W +I+G D A+
Sbjct: 287 LSSALLGCTLTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCL 346
Query: 230 FKQMPET-CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
F++M + W + ++VL+ N A N+ + YFE S
Sbjct: 347 FREMIDNKIRPDWITFVAVLL----------------ACNHAGLVNIGMAYFE-----SM 385
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
++ +++ D + M+ LG EE LK M P A F ++L C
Sbjct: 386 VRDYKVEPQPD--HYTCMVDLLGRAGKLEEALKLIRSMPF---RPHAAVFGTLLGAC 437
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 154/301 (51%), Gaps = 23/301 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+RN ++AQ+ FD+MP +D +WN MI GY + G ++ A LF M E++ ++N +I+
Sbjct: 135 VRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMIS 194
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL-KDVVSWNL 119
G ++ +++ A F VR VV W +MI+GY+ ++ A +F M + K++V+WN
Sbjct: 195 GYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNA 254
Query: 120 VIGALVNCQRMDLAESYFKEM---GARDVAS----------WTIMVNGLVREGRIVEARK 166
+I V R + F+ M G R +S T +++ + G + +A K
Sbjct: 255 MISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCTLTSLISMYCKCGELGDAWK 314
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL-TSWKQLINGLV---NSRR 222
LF+ M KDV AWN MI+GY +G A LF++M D + W + L+ ++
Sbjct: 315 LFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGL 374
Query: 223 IDAAISYFKQM-----PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
++ ++YF+ M E + ++ +L R G ++EA + P+ A+ ++
Sbjct: 375 VNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLL 434
Query: 278 G 278
G
Sbjct: 435 G 435
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 200/626 (31%), Positives = 327/626 (52%), Gaps = 45/626 (7%)
Query: 12 LFDKMPQRDTVTWNVMI----RGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGLM 63
L + PQ +T W + R Y + A L+ M D +TY +I
Sbjct: 167 LLMRYPQANT--WKMPAKASRRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACS 224
Query: 64 QSDNVQGAKEVFD-----GMEVRDVVTWNSMISGY-VCNGLIDEALRVFHGMPLKDVVSW 117
+ AK+V + G + DV N++I+ + VC+ + D A RVF+ + D VSW
Sbjct: 225 IRRSEWEAKQVHNHVLKLGFD-SDVYVRNTLINCFSVCSNMTD-ACRVFNESSVLDSVSW 282
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
N ++ + ++ A+ + +M R + + M+ G +VEA KLFD+M KD+
Sbjct: 283 NSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMV 342
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHD-----------RDLTSWKQLINGLVNSRRIDAA 226
W+ +IA + N A F MH L++ L+ +VN ++ +
Sbjct: 343 TWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLL--VVNMGKLIHS 400
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVG 286
+S K E+ N++I + + G + A ++ ++ SW ++I GY + V
Sbjct: 401 LS-LKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVD 459
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
+A +F+ M +DV W+ MI G +NDL +E L F +M+ SG PD T SV++ C+
Sbjct: 460 NAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACA 519
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
L L+ G+ +HA I RN T + +I MY +CG +++AL F + I +
Sbjct: 520 RLAALEQGKWVHAY---IKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGIST 576
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
WN++I GLA +G E +L++F M+ P++ITF+GVL AC + GLVD+G+++F M
Sbjct: 577 WNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMI 636
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV--WGALLGACRIHN 521
+ + +QP HY C+VDLLGR G + EA LLN + ++P V WGALLGAC+ H
Sbjct: 637 HDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNR-----MPMTPDVATWGALLGACKKHG 691
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
+ ++G G +++EL+P++ G +++L+ +Y S G+ +D I M ++ V K PGCS I
Sbjct: 692 DSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMI 751
Query: 582 QINDGGHVFLSGDSSHPKFHRLRYLL 607
+ N H FL+GD +HP + +L
Sbjct: 752 EANGVIHEFLAGDKTHPDMDAIEDML 777
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 234/466 (50%), Gaps = 34/466 (7%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+ + +A +F++ D+V+WN ++ GY + G ++ A +++QMPER + N++I
Sbjct: 262 SNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFG 321
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-PLKDVVSWNLVIG 122
V A ++FD M +D+VTW+++I+ + N + +EA+R F GM + +V + +
Sbjct: 322 MRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVS 381
Query: 123 ALVNCQRM------DLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMP 172
AL C + L S ++G S+ + N L+ + G I+ ARKLFD+
Sbjct: 382 ALSACANLLVVNMGKLIHSLSLKIGTE---SYINLQNALIYMYSKCGDIMVARKLFDEAY 438
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
D+ +WN MI+GYL V A+ +F M ++D+ SW +I+G + D ++ F++
Sbjct: 439 LLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQE 498
Query: 233 MP----ETCEKTWNSIISVLIRNGLVKEA---HSYLEKYPYS-NIASWTNVIVGYFEMGE 284
M + E T S+IS R +++ H+Y+++ + N+ T +I Y + G
Sbjct: 499 MQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGC 558
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
V +A++VF M + ++ WN +I GL N L E L F MK+ +P+ TF VL
Sbjct: 559 VETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGA 618
Query: 345 CSDLPTLDLGRQ-----IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI- 398
C + +D G+ IH I+ + M+ + R G +Q A + +P+
Sbjct: 619 CRHMGLVDEGQHHFYSMIHDHKIQPNVKHY----GCMVDLLGRAGKLQEAEELLNRMPMT 674
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
D+ +W +++ HG +E + +L + +PD F +LS
Sbjct: 675 PDVATWGALLGACKKHGDSEMGRRVGR--KLIELQPDHDGFHVLLS 718
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 195/641 (30%), Positives = 328/641 (51%), Gaps = 41/641 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
++EA+N+FD MP ++ V+W MI GY + G DNA+ L+ QM D FT+ +++
Sbjct: 149 LKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKS 208
Query: 62 LMQSDNVQGAKE----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
D+ + A++ V D++ N++IS Y + +A+ VF + +KD++SW
Sbjct: 209 CSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISW 268
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
+I A +F+EM ++ V N V KL + + +
Sbjct: 269 GSMIAGFSQLGYELEALCHFREMLSQSV----YQPNEFVFGSAFSACSKLLEPDCGRQIH 324
Query: 178 AWNL-------MIAG------YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
+ + AG Y G + A +F + DL +W +I G +
Sbjct: 325 GLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAK 384
Query: 225 AAISYFKQMPETC----EKTWNSII-----SVLIRNGLVKEAHSYLEKYPYS-NIASWTN 274
+ S+F QM T + T S++ V++ +G+ + HSY+ K ++ +I +
Sbjct: 385 ESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGI--QVHSYIVKMGFNLDIPVCNS 442
Query: 275 VIVGYFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++ Y + + A++VFE + + D+ WN ++ + + E L+ M S P
Sbjct: 443 LLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKP 502
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D+ T T+VL + + ++G QIH +K N +VSNA+I MY +CG+++ A F
Sbjct: 503 DHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMF 562
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
S+ DIISW+S+I G A G ++A ELF MR KP++ITFVG+L+ACS+ G+V+
Sbjct: 563 DSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVE 622
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+G + M+ Y + P H +C+VDLL R G +D A + IR VW L
Sbjct: 623 EGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDF---IRQMPFVPDVVVWKTL 679
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
L AC++H N++VG+ A E V++++P+NS ++L ++ S G +D R+ + M+ V
Sbjct: 680 LAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVG 739
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
K PG SWI+I D HVFL+ D+ HP+ ++ +L L +I
Sbjct: 740 KVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQI 780
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 195/447 (43%), Gaps = 36/447 (8%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG-- 61
+++ +A N+F ++ +D ++W MI G+ + G+ A+C F +M + ++ N + G
Sbjct: 248 SQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSA 307
Query: 62 ------LMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMP 110
L++ D G+ ++ D+ S+ Y G ++ A VF+ +
Sbjct: 308 FSACSKLLEPD----CGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIE 363
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGL-------VREGRIVE 163
D+V+WN +I + + S+F +M + + V L V ++
Sbjct: 364 KPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQ 423
Query: 164 ARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR-DLTSWKQLINGLVNSR 221
KM D+ N +++ Y + A +F+ + ++ D+ SW L+ +
Sbjct: 424 VHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQN 483
Query: 222 RIDAAISYFKQMPETCEKTWN-SIISVLIRNGLV------KEAHSYLEKYPYSNIASWTN 274
+ + K M + K + ++ +VL+ +G + + H ++ K + S +N
Sbjct: 484 QAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSN 543
Query: 275 VIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++ Y + G + A K+F+ + D+ W+ +I G + G+E + F M+ G P
Sbjct: 544 ALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKP 603
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV-SNAMITMYARCGNIQSALLE 392
+ TF +LT CS + ++ G +++ + R T + M+ + AR G + A
Sbjct: 604 NEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDF 663
Query: 393 FSSVP-IHDIISWNSIICGLAYHGYAE 418
+P + D++ W +++ HG E
Sbjct: 664 IRQMPFVPDVVVWKTLLAACKVHGNLE 690
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 116/265 (43%), Gaps = 30/265 (11%)
Query: 195 AEDLFQKMHDRDLTS--WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A D+FQK L S + LIN + R ++ + M TC + I+
Sbjct: 84 AFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHM-LTCNYQPDMILQ------ 136
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+++ Y + G + A +F+ M ++V W MI G
Sbjct: 137 --------------------NHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSR 176
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
+ + +VQM SG PD+ TF S++ CS L L RQ+HA +K
Sbjct: 177 YGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIA 236
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF-ERMRLTD 431
NA+I+MY + + A+ FS + I D+ISW S+I G + GY +AL F E + +
Sbjct: 237 QNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSV 296
Query: 432 FKPDDITFVGVLSACSYAGLVDQGR 456
++P++ F SACS D GR
Sbjct: 297 YQPNEFVFGSAFSACSKLLEPDCGR 321
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSP-DNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
I L + +L E LK F ++ SP + T+T ++ CS L +L+ GR+IH +
Sbjct: 69 IISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCN 128
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
+ N +++MY +CG+++ A F S+P+ +++SW S+I G + +G + A+ L+
Sbjct: 129 YQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYV 188
Query: 426 RMRLTDFKPDDITFVGVLSACS 447
+M + PD TF ++ +CS
Sbjct: 189 QMLRSGHIPDHFTFGSIVKSCS 210
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 183/604 (30%), Positives = 312/604 (51%), Gaps = 44/604 (7%)
Query: 11 NLFDKMPQRDTVTWNVMIRGYFKNGFLDNA-MCLFNQMPE----RDMFTYNTVIAGLMQS 65
++F D + M++ Y + G + LF M + + ++ +V+ S
Sbjct: 42 HIFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGS 101
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
+++ V RD N ++ Y G I+ A ++F MP + V WN++I
Sbjct: 102 ESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYW 161
Query: 126 NCQRMDLAESYFKEMG----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
C + A + F MG +R+V +WT M+ G ++G + AR FDKMP + V +WN
Sbjct: 162 KCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNA 221
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDR-----DLTSWKQLINGLVN----------SRRIDAA 226
M++GY G LF M D T+W +I+ + R++D
Sbjct: 222 MLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDK 281
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEK---YPYSNIASWTNVIVGYFEMG 283
+ + P KT +++ + + G ++ AH E+ Y Y + W +I Y +G
Sbjct: 282 VGF---RPNYFVKT--ALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVG 336
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM--KESGPSPDNATFTSV 341
++ SA +F+ M RD WN MI G +N + +K F +M E PD T SV
Sbjct: 337 DLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSV 396
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFT-TVSNAMITMYARCGNIQSALLEFSSVPIHD 400
+ C L L LG +K+ Q + +V N++I MY+RCG++Q A+L F + D
Sbjct: 397 FSACGHLGELGLGNWA-VSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRD 455
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
++S+N++I G A HG+ +++EL +M+ +PD IT++ +L+ACS+AGL+D+G+ F+
Sbjct: 456 LVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFE 515
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
+K P HY C++D+LGR G ++EAM L I++ +E ++G+LL A IH
Sbjct: 516 SIKF-----PDVDHYACMIDMLGRAGRLEEAMKL---IQSMPMEPHAGIYGSLLNATSIH 567
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
+++GE+A ++ ++EP+NSG Y +L+ +Y S GR ++ ++ M++ GVKK G SW
Sbjct: 568 KQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSW 627
Query: 581 IQIN 584
++ N
Sbjct: 628 LEHN 631
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 207/447 (46%), Gaps = 85/447 (19%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAG 61
I+ A+ LFD+MP R WNVMI GY+K G + A LF+ M + R++ T+ T+I G
Sbjct: 135 IEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITG 194
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-----PLKDVVS 116
+ N++ A+ FD M R VV+WN+M+SGY G +E +R+F+ M D +
Sbjct: 195 HAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETT 254
Query: 117 WNLVIGAL------------------------------------VNCQRMDLAESYFKEM 140
W VI + C ++ A F+++
Sbjct: 255 WATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQL 314
Query: 141 GA---RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
G R W M++ R G + A+ LFDKMP +D +WN MIAGY NG A
Sbjct: 315 GVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIK 374
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV---LIRNGLV 254
LF++M + +SR+ D E T S+ S L GL
Sbjct: 375 LFEEMISSE------------DSRKPD-------------EVTMVSVFSACGHLGELGLG 409
Query: 255 KEAHSYLE-KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
A S L+ + +I+ + ++I Y G + A+ +F+ M TRD+ +N +I G E+
Sbjct: 410 NWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEH 469
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
G E ++ +MKE G PD T+ ++LT CS LD G+++ ++IK F V
Sbjct: 470 GHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLF-ESIK-----FPDVD 523
Query: 374 N--AMITMYARCGNIQSALLEFSSVPI 398
+ MI M R G ++ A+ S+P+
Sbjct: 524 HYACMIDMLGRAGRLEEAMKLIQSMPM 550
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 139/352 (39%), Gaps = 58/352 (16%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYN 56
+ ++ A+ FDKMP+R V+WN M+ GY + G + + LFN M + D T+
Sbjct: 197 KKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWA 256
Query: 57 TVIAGL------------------------------------MQSDNVQGAKEVFDGMEV 80
TVI+ + N++ A ++F+ + V
Sbjct: 257 TVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGV 316
Query: 81 ---RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF 137
R V WN+MIS Y G + A +F MP +D VSWN +I A F
Sbjct: 317 YKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLF 376
Query: 138 KEMGAR------DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ----AWNLMIAGYL 187
+EM + D + + + G + + +Q +N +I Y
Sbjct: 377 EEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYS 436
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNS 243
G + A +FQ+M RDL S+ LI+G +I +M E + T+ +
Sbjct: 437 RCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIA 496
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
I++ GL+ E E + ++ + +I G + A+K+ + M
Sbjct: 497 ILTACSHAGLLDEGQRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSM 548
>gi|345505216|gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
Length = 617
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 287/534 (53%), Gaps = 29/534 (5%)
Query: 77 GMEVRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVNCQRMD 131
G EV D WN++I + +AL +F +G+ + D S +LV+ A C R+
Sbjct: 84 GGEVEDPFLWNAVIKSHSHGKDPKQALLLFCLMLENGVSV-DKFSMSLVLKA---CSRLG 139
Query: 132 LAESYFKEMG-------ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
+ + G D+ ++ ++ G + AR++FD+MP +D ++N MI
Sbjct: 140 FVKGGLQIHGILRKTGLCSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMID 199
Query: 185 GYLDNGCVGVAEDLFQKMHD--RDLTSWKQLINGLVN-SRRIDAAISYFKQMPETCEKTW 241
GY+ G + A +LF M ++L SW +I+G S +D A + F +MPE +W
Sbjct: 200 GYVKRGLIESARELFDLMPREVKNLISWNSIISGYAQTSDGVDIASNLFAEMPEKDLISW 259
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
NS+I +++G +++A + P ++ +W +I GY ++G V A +F+ M RDV
Sbjct: 260 NSMIDGYVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVV 319
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
+N M+ G +N E L+ F M KES SPD T VL+ + L L +H
Sbjct: 320 SYNSMMAGYVQNKYHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMH-- 377
Query: 361 AIKIARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
+ I QF + A+I MY++CG+IQ A+L F + I WN++I GLA HG
Sbjct: 378 -LYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLG 436
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
E A ++ ++ KPDDITFVGVL+ACS++GLV +G F+ M+ K+ ++PR HY C
Sbjct: 437 ESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGC 496
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
+VD+L R G I+ A NL+ E+ IE + +W L AC H + GE+ G+ ++
Sbjct: 497 MVDILSRSGSIELAKNLIQEM---PIEPNDVIWRTFLTACNHHKEFETGELVGKHLILQA 553
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
N Y++L+ MY S G+ +D +RI MKE ++K PGCSWI+++ H F
Sbjct: 554 GYNPSSYVLLSNMYASFGKWKDVRRIRTMMKERKIEKIPGCSWIELDGRVHEFF 607
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 209/420 (49%), Gaps = 32/420 (7%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGLMQSDNVQGAKEVF 75
D + +++++ + GF+ + + + + D+F N +I ++ + A+++F
Sbjct: 124 DKFSMSLVLKACSRLGFVKGGLQIHGILRKTGLCSDLFLQNCLIGLYLKCGCLGFARQIF 183
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWNLVI-GALVNCQRMDL 132
D M RD V++NSMI GYV GLI+ A +F MP +K+++SWN +I G +D+
Sbjct: 184 DRMPQRDSVSFNSMIDGYVKRGLIESARELFDLMPREVKNLISWNSIISGYAQTSDGVDI 243
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A + F EM +D+ SW M++G V+ GRI +A+ LFD MP +DV W MI GY G V
Sbjct: 244 ASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFV 303
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSIISV 247
A+ LF +M RD+ S+ ++ G V ++ A+ F M + E T ++S
Sbjct: 304 HQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHMEALEIFSDMEKESHLSPDETTLVIVLSA 363
Query: 248 LIRNGLVKEA---HSYL-EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+ + G + +A H Y+ EK + +I Y + G + A+ VFE + + + W
Sbjct: 364 IAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHW 423
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLGRQ 356
N MI GL + LGE +Q++ PD+ TF VL CS L +L R+
Sbjct: 424 NAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMRR 483
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYH 414
H ++ M+ + +R G+I+ A +PI +D+I W + + +H
Sbjct: 484 KHKIEPRLQH------YGCMVDILSRSGSIELAKNLIQEMPIEPNDVI-WRTFLTACNHH 536
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 190/398 (47%), Gaps = 25/398 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTVIAGLMQ-S 65
A+ +FD+MPQRD+V++N MI GY K G +++A LF+ MP +++ ++N++I+G Q S
Sbjct: 179 ARQIFDRMPQRDSVSFNSMIDGYVKRGLIESARELFDLMPREVKNLISWNSIISGYAQTS 238
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D V A +F M +D+++WNSMI GYV +G I++A +F MP +DVV+W +I
Sbjct: 239 DGVDIASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYA 298
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP-----AKDVQAWN 180
+ A++ F +M RDV S+ M+ G V+ +EA ++F M + D
Sbjct: 299 KLGFVHQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHMEALEIFSDMEKESHLSPDETTLV 358
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN----SRRIDAAISYFKQMPET 236
++++ G + A D+ + ++ +L L++ I A+ F+ +
Sbjct: 359 IVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK 418
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYFEMGEVGSAIKVF 292
WN++I L +GL + A L + +I ++ V+ G V + F
Sbjct: 419 SIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCF 478
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ--MKESGPSPDNATFTSVLTICSDLPT 350
ELM + + +G + L G + ++E P++ + + LT C+
Sbjct: 479 ELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIQEMPIEPNDVIWRTFLTACNHHKE 538
Query: 351 LDLGRQIHAQAIKIA---RNQFTTVSNAMITMYARCGN 385
+ G + I A + + +SN MYA G
Sbjct: 539 FETGELVGKHLILQAGYNPSSYVLLSN----MYASFGK 572
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 139/302 (46%), Gaps = 41/302 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+++ RI++A++LFD MP+RD VTW MI GY K GF+ A LF+QMP RD+ +YN+++A
Sbjct: 267 VKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMMA 326
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +Q+ A E+F ME ++ DE V V+S
Sbjct: 327 GYVQNKYHMEALEIFSDMEKESHLS-------------PDETTLVI-------VLSAIAQ 366
Query: 121 IGALVNCQRMDL--AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+G L M L E F G VA +++ + G I A +F+ + K +
Sbjct: 367 LGRLSKAMDMHLYIVEKQFFLGGKLGVA----LIDMYSKCGSIQHAMLVFEGIENKSIDH 422
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMP 234
WN MI G +G A D+ ++ R D ++ ++N +S + + F+ M
Sbjct: 423 WNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMR 482
Query: 235 -----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVG-----YFEMG 283
E + + ++ +L R+G ++ A + +++ P N W + FE G
Sbjct: 483 RKHKIEPRLQHYGCMVDILSRSGSIELAKNLIQEMPIEPNDVIWRTFLTACNHHKEFETG 542
Query: 284 EV 285
E+
Sbjct: 543 EL 544
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 190/654 (29%), Positives = 326/654 (49%), Gaps = 59/654 (9%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-RDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
R T N +I Y K G LD+AM +F M + RD+ ++N++I+G +Q+ A ++F G
Sbjct: 197 RSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRG 256
Query: 78 MEVRDVVTWNSMISG---YVCNGLIDEAL-RVFHGMPLKDVVSWNLVIGALV----NCQR 129
M+ R V++ NS + VC L L R H LK N+ AL+ C R
Sbjct: 257 MQ-RAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLVMYTKCGR 315
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM------------------ 171
+D A F+E+ +D SW M++ V+ G EA + +M
Sbjct: 316 VDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSA 375
Query: 172 --------PAKDVQAW-------------NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
K+V A+ N ++ Y+ + + +F +M +D SW
Sbjct: 376 VGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISW 435
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG-------LVKEAHSYLEK 263
+I S R A+ F++ + K +I ++ L K+ H Y +
Sbjct: 436 TTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIR 495
Query: 264 YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
++ +I Y E GEV ++K+FE + +D+ W MI + L E L F
Sbjct: 496 NGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLF 555
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
+M+ + PD+ S+L L +L G+++H I+ + + ++++ MY+ C
Sbjct: 556 AEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGC 615
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G++ AL F++V D++ W ++I HG+ ++A++LF+RM T PD ++F+ +L
Sbjct: 616 GSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALL 675
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
ACS++ LV++G+ Y D M + Y L+P HY CVVDLLGR G +EA I++ +
Sbjct: 676 YACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEF---IKSMPL 732
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI 563
+ VW +LLGACR+H N ++ +A R++ELEP+N G Y++++ ++ G+ +AK +
Sbjct: 733 KPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEV 792
Query: 564 FAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
A++ E G++K+P CSWI+I + H F + D+SH R+ L + + +E
Sbjct: 793 RARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKE 846
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 135/549 (24%), Positives = 234/549 (42%), Gaps = 101/549 (18%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF--------------------- 106
V A+ +FDGM R V +WN++I Y+ +G EAL V+
Sbjct: 111 VADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASV 170
Query: 107 ----------------HGMPLK-----DVVSWNLVIGALVNCQRMDLAESYFKEM-GARD 144
HG+ +K N +I C +D A F+ M RD
Sbjct: 171 LKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRD 230
Query: 145 VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE-DLFQKMH 203
VASW M++G ++ G ++A LF M + + G L C +A+ +L +++H
Sbjct: 231 VASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQV-CTELAQLNLGRELH 289
Query: 204 DRDLTSWKQL---INGLV----NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
L S ++ N L+ R+D+A+ F+++ E +WNS++S ++NGL E
Sbjct: 290 AALLKSGSEVNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAE 349
Query: 257 AHSYLEKY-------PYSNIASWTNVI--VGYFEMG----------------EVGSAI-- 289
A ++ + ++ I S ++ + +G+ G +VG+ +
Sbjct: 350 AIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMD 409
Query: 290 ------------KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
VF+ M +D W +I ++ E L+ F + ++ G D
Sbjct: 410 MYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMM 469
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQF--TTVSNAMITMYARCGNIQSALLEFSS 395
S+L CS L T+ L +Q+H AI RN V N +I +Y CG + +L F +
Sbjct: 470 IGSILEACSGLETILLAKQLHCYAI---RNGLLDLVVKNRIIDIYGECGEVYHSLKMFET 526
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
V DI++W S+I A G +AL LF M+ TD +PD + V +L A + +G
Sbjct: 527 VEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKG 586
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
+ + + F A + +VD+ G + A+ + N ++ + +W A++
Sbjct: 587 KEVHGFLIRRNF-HMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDM----VLWTAMIN 641
Query: 516 ACRIHNNIK 524
A +H + K
Sbjct: 642 ATGMHGHGK 650
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 224/522 (42%), Gaps = 51/522 (9%)
Query: 97 GLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM---GARDVA------S 147
G + +A +F GM + V SWN +IGA ++ A ++ M A VA +
Sbjct: 109 GRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLA 168
Query: 148 WTIMVNGLVREGRI-VEARKLFDKMPA-KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD- 204
+ +G+ +GR E L K + N +IA Y G + A +F+ MHD
Sbjct: 169 SVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDG 228
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV--------LIRNGLVKE 256
RD+ SW +I+G + + A+ F+ M + NS +V L + L +E
Sbjct: 229 RDVASWNSMISGCLQNGMFLQALDLFRGMQRAV-LSMNSYTTVGVLQVCTELAQLNLGRE 287
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
H+ L K ++V Y + G V SA++VF + +D WN M+ +N L
Sbjct: 288 LHAALLKSGSEVNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLY 347
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
E ++F +M G PD+A S+ + L L G+++HA AIK + T V N +
Sbjct: 348 AEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTL 407
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+ MY +C I+ + F + I D ISW +II A +ALE+F + K D
Sbjct: 408 MDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDP 467
Query: 437 ITFVGVLSACS-------------YA---GLVDQ-------------GRYYFDCMKNKYF 467
+ +L ACS YA GL+D G Y +
Sbjct: 468 MMIGSILEACSGLETILLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETV 527
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG- 526
Q +T +++ GL++EA+ L E+++ ++ ++LGA +++ G
Sbjct: 528 EQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGK 587
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
E+ G + + L +MY CG A ++F +K
Sbjct: 588 EVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVK 629
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 137/320 (42%), Gaps = 55/320 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER---------- 50
M+ I+ + ++FD+M +D ++W +I Y ++ A+ +F + +
Sbjct: 412 MKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIG 471
Query: 51 ----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
D+ N +I + V + ++F+ +E +D
Sbjct: 472 SILEACSGLETILLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKD 531
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFK 138
+VTW SMI+ Y +GL++EAL +F M DV V+ ++GA+ + +
Sbjct: 532 IVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHG 591
Query: 139 EMGARDVASWTIMVNGLVRE----GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ R+ +V+ LV G + A K+F+ + KD+ W MI +G
Sbjct: 592 FLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQ 651
Query: 195 AEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSII 245
A DLF++M +T S+ L+ +S+ ++ Y M T ++ + ++
Sbjct: 652 AIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVV 711
Query: 246 SVLIRNGLVKEAHSYLEKYP 265
+L R+G +EA+ +++ P
Sbjct: 712 DLLGRSGQTEEAYEFIKSMP 731
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 118/284 (41%), Gaps = 50/284 (17%)
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT--VSNAMITMYARCGNIQ 387
G SP + VL + + + G Q+HA A+ + ++ ++ MY +CG +
Sbjct: 53 GRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVA 112
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL---TDFKPDDITFVGVLS 444
A L F + + SWN++I G A +AL ++ MRL + PD T VL
Sbjct: 113 DARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLK 172
Query: 445 ACSYAGLVDQGRYYFDC--MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
A +G+ GR + + K+ L + ++ + + G++D AM + E+ DG
Sbjct: 173 A---SGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVF-ELMHDG 228
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVME---LEPNN---SGVYLILTE------- 549
+V+ W +++ C + N + + + R M+ L N+ GV + TE
Sbjct: 229 RDVAS--WNSMISGC-LQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLG 285
Query: 550 -----------------------MYLSCGRREDAKRIFAQMKEN 570
MY CGR + A R+F ++ E
Sbjct: 286 RELHAALLKSGSEVNIQCNALLVMYTKCGRVDSALRVFREIDEK 329
>gi|359492783|ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
[Vitis vinifera]
Length = 575
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 185/559 (33%), Positives = 293/559 (52%), Gaps = 29/559 (5%)
Query: 48 PERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFH 107
P+ + + T L +S ++ + G + W +I Y+ G EAL V+
Sbjct: 27 PQNERQNHQTQSPSLPKS--LKQGSDFCPGKGTPSLSNWCHLIRSYLSQGAPREALLVYT 84
Query: 108 GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR--------DVASWTIMVNGLVREG 159
G+ K V + L C + + + + K + A DV T +V + G
Sbjct: 85 GLRRKGVYLLGVAPLVLKACASLSIVK-HGKALHAESIKNGVDFDVMIGTSLVCMYAKCG 143
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
+V++RK+FD MP ++ WN MI GYL NG A LF+KM R +W ++I+G
Sbjct: 144 NVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIEMIDGFAR 203
Query: 220 SRRIDAAISYFKQMPETCEK--TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
S + A +F +P TW ++ RN ++ A E P N +W+++I
Sbjct: 204 SGDTETARRFFDDVPSELRNVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMIS 263
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
GY + G V A +F+ + R++ WN +I G +N EE L+ F +M+ G PD T
Sbjct: 264 GYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVT 323
Query: 338 FTSVLTICSDLPTLDLGRQIH----AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
SVL+ CS L LD G++IH + IK+ NQF V N ++ MYA+CG++ +A L F
Sbjct: 324 IASVLSACSQLGLLDAGKKIHHMMNHKGIKL--NQF--VLNGLVDMYAKCGDLANARLIF 379
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ + WNS+I G A HG +++ALE F RM + PD+ITF+ VLSAC++ G V+
Sbjct: 380 EGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVN 439
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
G F M+ KY L HY C++DLLGR G I EA +L+ + ++ + VWGAL
Sbjct: 440 AGLEIFSRME-KYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMP---VKPNDVVWGAL 495
Query: 514 LGACRIHNNIKVGEIAGERVMELEPN-NSGV---YLILTEMYLSCGRREDAKRIFAQMKE 569
LGACR+H ++++ + E +++++ N +SG Y++L+ +Y + R E A+++ +M
Sbjct: 496 LGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMRMEMAN 555
Query: 570 NGVKKEPGCSWIQINDGGH 588
G +K GCS I + H
Sbjct: 556 KGFQKTSGCSSIMPGNNTH 574
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 195/434 (44%), Gaps = 67/434 (15%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ +++ +FD MP+R+ VTWN MI GY NG +A+ LF +M R T+ +I G +S
Sbjct: 145 VVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIEMIDGFARS 204
Query: 66 DNVQGAKEVFDGM--EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
+ + A+ FD + E+R+VVTW M+ GY N ++ A VF GMP
Sbjct: 205 GDTETARRFFDDVPSELRNVVTWTVMVDGYARNAEMEAAREVFEGMP------------- 251
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
R+ +W+ M++G ++G + EAR +FD++P +++ WN +I
Sbjct: 252 ------------------QRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLI 293
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS 243
+GY NG A + F KM E E T S
Sbjct: 294 SGYAQNGFSEEALEAFGKMQAEGF---------------------------EPDEVTIAS 326
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM----GEVGSAIKVFELMTTRD 299
++S + GL+ + I V+ G +M G++ +A +FE M R+
Sbjct: 327 VLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRN 386
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
WN MI G + +E L+FF +M++S PD TF SVL+ C+ ++ G +I +
Sbjct: 387 RACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEIFS 446
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHGYA 417
+ K +I + R G I+ A L++ V +D++ W +++ H
Sbjct: 447 RMEKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVV-WGALLGACRVHLDM 505
Query: 418 EKALELFERMRLTD 431
E A + E + D
Sbjct: 506 EMADRVVEEIVKVD 519
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 148/282 (52%), Gaps = 18/282 (6%)
Query: 2 RNARIQEAQNLFDKMPQ--RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVI 59
R+ + A+ FD +P R+ VTW VM+ GY +N ++ A +F MP+R+ F ++++I
Sbjct: 203 RSGDTETARRFFDDVPSELRNVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMI 262
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVV 115
+G + NV+ A+ +FD + VR++V WNS+ISGY NG +EAL F M + D V
Sbjct: 263 SGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEV 322
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKM 171
+ V+ A +D + M + + ++NGLV + G + AR +F+ M
Sbjct: 323 TIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGM 382
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAI 227
++ WN MI+G+ +G A + F +M D D ++ +++ + ++A +
Sbjct: 383 AHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGL 442
Query: 228 SYFKQMPE----TCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
F +M + T K + +I +L R G +KEA+ +++ P
Sbjct: 443 EIFSRMEKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMP 484
>gi|302760463|ref|XP_002963654.1| hypothetical protein SELMODRAFT_79648 [Selaginella moellendorffii]
gi|300168922|gb|EFJ35525.1| hypothetical protein SELMODRAFT_79648 [Selaginella moellendorffii]
Length = 580
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 162/539 (30%), Positives = 286/539 (53%), Gaps = 6/539 (1%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYF-KNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+N ++ EA+++FD+M +R +WN MI YF N A F +MPER+ +T+N +I
Sbjct: 10 QNLQLPEAKSVFDRMTERTFESWNAMITAYFIPNSSASLARLAFERMPERNPYTWNFLIV 69
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
++ +++ A+ VFD + + VTWN+MIS Y + EA +F +P+KDV S N++
Sbjct: 70 ASSRNGHLEEARMVFDKLPEKSAVTWNTMISCYAQKQCVSEAKCLFDSLPVKDVFSRNIL 129
Query: 121 IGALVNCQRMDLAESYFKEMGARDVAS--WTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+ A + A+ F + + ++ S W ++ + ++ EA+ +FD+M + V++
Sbjct: 130 LTAYAQSGNLAEAKEMFDSIPSEELTSICWNNILTAYSQNRQLPEAKSVFDRMTERTVES 189
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
WN MI Y+ NG + A+ ++ + +++ + ++N R A F +M +
Sbjct: 190 WNAMITAYVGNGDLDDAKLVYDMITEKNSIAGTSMVNAYAQEGRTRQAKLVFDEMVDHDV 249
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
+W ++++ + NG + A + P + +W+ +++ Y G + A K+ E M +
Sbjct: 250 VSWTTMLAAYLNNGHITSAENLFALMPARDYLAWSTMVLAYAIKGNIELATKLHEEMPVK 309
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
D T W +I G ++ L +F M G PD T S L C+ L G+ I
Sbjct: 310 DATSWTALISGHARAGHSKQALAYFKLMDLEGIEPDRITLMSALEACASSTALAEGKTIF 369
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
A ++ T V A+++M+ +CG + A F+++P+ +++SW +II A G
Sbjct: 370 EGAAARGLDRDTFVGTALVSMFGKCGRLDQARALFNNLPLPNVVSWTNIIVAYAQSGERS 429
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
A E+F RM L +P+ +TF VL+ACS+ GL++ R YF M + P HY C+
Sbjct: 430 LAAEMFNRMDLQGEQPNWLTFSTVLAACSHGGLLEDARCYFLRMIGDNSIDPVVEHYRCL 489
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
VDLLGR G +D +L NE+ +G EVS W A+LGAC +H + + G ++++E++
Sbjct: 490 VDLLGRSGQLDRMEDLANEMPFEGDEVS---WTAVLGACSLHGDTERGGRIAKQLLEMD 545
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 122/270 (45%), Gaps = 18/270 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+ N I A+NLF MP RD + W+ M+ Y G ++ A L +MP +D ++ +I+
Sbjct: 260 LNNGHITSAENLFALMPARDYLAWSTMVLAYAIKGNIELATKLHEEMPVKDATSWTALIS 319
Query: 61 GLMQSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
G ++ + + A F M++ D +T S + + + E +F G + +
Sbjct: 320 GHARAGHSKQALAYFKLMDLEGIEPDRITLMSALEACASSTALAEGKTIFEGAAARGLDR 379
Query: 117 WNLVIGALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
V ALV+ C R+D A + F + +V SWT ++ + G A ++F++M
Sbjct: 380 DTFVGTALVSMFGKCGRLDQARALFNNLPLPNVVSWTNIIVAYAQSGERSLAAEMFNRMD 439
Query: 173 AKDVQ----AWNLMIAGYLDNGCVGVAEDLFQKM-----HDRDLTSWKQLINGLVNSRRI 223
+ Q ++ ++A G + A F +M D + ++ L++ L S ++
Sbjct: 440 LQGEQPNWLTFSTVLAACSHGGLLEDARCYFLRMIGDNSIDPVVEHYRCLVDLLGRSGQL 499
Query: 224 DAAISYFKQMP-ETCEKTWNSIISVLIRNG 252
D +MP E E +W +++ +G
Sbjct: 500 DRMEDLANEMPFEGDEVSWTAVLGACSLHG 529
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 172/529 (32%), Positives = 285/529 (53%), Gaps = 39/529 (7%)
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
RD N ++ Y G I+ A ++F MP + V WN++I C + A + F M
Sbjct: 60 RDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVM 119
Query: 141 G----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
G +R+V +WT M+ G ++G + AR FDKMP + V +WN M++GY G
Sbjct: 120 GDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETI 179
Query: 197 DLFQKMHDR-----DLTSWKQLINGLVN----------SRRIDAAISYFKQMPETCEKTW 241
LF M D T+W +I+ + R++D + + P KT
Sbjct: 180 RLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGF---RPNYFVKT- 235
Query: 242 NSIISVLIRNGLVKEAHSYLEK---YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
+++ + + G ++ AH E+ Y Y + W +I Y +G++ SA +F+ M R
Sbjct: 236 -ALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQR 294
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQM--KESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
D WN MI G +N + +K F +M E PD T SV + C L L LG
Sbjct: 295 DTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNW 354
Query: 357 IHAQAIKIARNQFT-TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+K+ Q + +V N++I MY+RCG++Q A+L F + D++S+N++I G A HG
Sbjct: 355 A-VSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHG 413
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
+ +++EL +M+ +PD IT++ +L+ACS+AGL+D+G+ F+ +K P HY
Sbjct: 414 HGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKF-----PDVDHY 468
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
C++D+LGR G ++EAM L I++ +E ++G+LL A IH +++GE+A ++ +
Sbjct: 469 ACMIDMLGRAGRLEEAMKL---IQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFK 525
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIN 584
+EP+NSG Y +L+ +Y S GR ++ ++ M++ GVKK G SW++ N
Sbjct: 526 VEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLEHN 574
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 205/446 (45%), Gaps = 83/446 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAG 61
I+ A+ LFD+MP R WNVMI GY+K G + A LF+ M + R++ T+ T+I G
Sbjct: 78 IEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITG 137
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-----PLKDVVS 116
+ N++ A+ FD M R VV+WN+M+SGY G +E +R+F+ M D +
Sbjct: 138 HAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETT 197
Query: 117 WNLVIGAL------------------------------------VNCQRMDLAESYFKEM 140
W VI + C ++ A F+++
Sbjct: 198 WATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQL 257
Query: 141 GA---RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
G R W M++ R G + A+ LFDKMP +D +WN MIAGY NG A
Sbjct: 258 GVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIK 317
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRID--AAISYFKQMPETCE-KTWNSIISVLIRNGLV 254
LF++M + +SR+ D +S F E N +S+L N +
Sbjct: 318 LFEEMISSE------------DSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHI- 364
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+I+ + ++I Y G + A+ +F+ M TRD+ +N +I G E+
Sbjct: 365 -----------QISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHG 413
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
G E ++ +MKE G PD T+ ++LT CS LD G+++ ++IK F V +
Sbjct: 414 HGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLF-ESIK-----FPDVDH 467
Query: 375 --AMITMYARCGNIQSALLEFSSVPI 398
MI M R G ++ A+ S+P+
Sbjct: 468 YACMIDMLGRAGRLEEAMKLIQSMPM 493
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 139/352 (39%), Gaps = 58/352 (16%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYN 56
+ ++ A+ FDKMP+R V+WN M+ GY + G + + LFN M + D T+
Sbjct: 140 KKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWA 199
Query: 57 TVIAGL------------------------------------MQSDNVQGAKEVFDGMEV 80
TVI+ + N++ A ++F+ + V
Sbjct: 200 TVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGV 259
Query: 81 ---RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF 137
R V WN+MIS Y G + A +F MP +D VSWN +I A F
Sbjct: 260 YKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLF 319
Query: 138 KEMGAR------DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ----AWNLMIAGYL 187
+EM + D + + + G + + +Q +N +I Y
Sbjct: 320 EEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYS 379
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNS 243
G + A +FQ+M RDL S+ LI+G +I +M E + T+ +
Sbjct: 380 RCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIA 439
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
I++ GL+ E E + ++ + +I G + A+K+ + M
Sbjct: 440 ILTACSHAGLLDEGQRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSM 491
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 14/252 (5%)
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
+ F M + NA+F SV+ + ++ A +K ++ V N ++ +
Sbjct: 16 VSLFKHMLQHCDIKPNASFYSVMMKSAGSESM----LFLAHVLKSGYDRDHYVRNGILGI 71
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
YA+ G I+ A F +P + WN +I G G E+A LF M + + IT+
Sbjct: 72 YAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITW 131
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+++ + G + R YFD M + + + ++ + G +E + L N++
Sbjct: 132 TTMITGHAKKGNLKTARMYFDKMPERSVVS-----WNAMLSGYAQGGAPEETIRLFNDML 186
Query: 500 ADG-IEVSPTVWGALLGACRIHNNIKVGEIAGERV---MELEPNNSGVYLILTEMYLSCG 555
+ G ++ T W ++ +C + + E ++ + PN V L +M+ CG
Sbjct: 187 SPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYF-VKTALLDMHAKCG 245
Query: 556 RREDAKRIFAQM 567
E A +IF Q+
Sbjct: 246 NLEAAHKIFEQL 257
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 126/309 (40%), Gaps = 44/309 (14%)
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI- 362
N + + G E + F + +SG D+ +L I + ++ R++ +
Sbjct: 31 NASFYSVMMKSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPD 90
Query: 363 --------------------------------KIARNQFTTVSNAMITMYARCGNIQSAL 390
+I+RN T + MIT +A+ GN+++A
Sbjct: 91 RTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTT--MITGHAKKGNLKTAR 148
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSACSYA 449
+ F +P ++SWN+++ G A G E+ + LF M + +PD+ T+ V+S+CS
Sbjct: 149 MYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSL 208
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
G + +K +P T ++D+ + G ++ A + ++ S
Sbjct: 209 GDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYR-SSVP 267
Query: 510 WGALLGACRIHNNIKVGEI-AGERVMELEPNNSGV-YLILTEMYLSCGRREDAKRIFAQM 567
W A++ A +VG++ + + + + P V + + Y G A ++F +M
Sbjct: 268 WNAMISAY-----ARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEM 322
Query: 568 KENGVKKEP 576
+ ++P
Sbjct: 323 ISSEDSRKP 331
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 183/578 (31%), Positives = 303/578 (52%), Gaps = 43/578 (7%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC 127
+ A+ VFD +V ++N++IS Y ++ A ++F MP D VS+N +I A
Sbjct: 59 LSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARR 118
Query: 128 QRMDLAESYFKEM--GARDVASWTIM-------VN-GLVREGRIVEARKLFDKMPAKDVQ 177
A F EM D+ +T+ +N GL+R+ + D V
Sbjct: 119 GDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSY----VS 174
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKM-HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
N +I Y NG + A +F + DRD SW ++ + R A+ + +M
Sbjct: 175 VGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEM--- 231
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI------- 289
T +I + V A + ++ + GY + VGS +
Sbjct: 232 ---TVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKC 288
Query: 290 --------KVFELMTTRDVTVWNVMIFGLG-ENDLGEEGLKFFVQMKESGPSPDNATFTS 340
KVF+ ++ D+ +WN MI G DL +E L+ F Q++ G PD+ +
Sbjct: 289 GGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVC 348
Query: 341 VLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
V++ CS++ + GRQ+H A+K I N+ + V+NA+I MY++CGN++ A F ++P
Sbjct: 349 VISACSNMSSPSQGRQVHGLALKLDIPSNRIS-VNNALIAMYSKCGNLRDAKTLFDTMPE 407
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
H+ +S+NS+I G A HG ++L LF+RM F P +ITF+ VL+AC++ G V+ G+ Y
Sbjct: 408 HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIY 467
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F+ MK K+ ++P + H++C++DLLGR G + EA L+ I D W ALLGACR
Sbjct: 468 FNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDP---GFFFWSALLGACR 524
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
IH N+++ A R+++L+P N+ Y++L +Y GR +DA + M++ GVKK+PGC
Sbjct: 525 IHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGC 584
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
SWI++N H+F++ D+ HP +++ L + +I++
Sbjct: 585 SWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKK 622
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 201/459 (43%), Gaps = 38/459 (8%)
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
C+R+ A F +V S+ +++ +E + A +LFD+MP D ++N +IA
Sbjct: 55 KCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAA 114
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
Y G A LF +M + L ++G++ + I+
Sbjct: 115 YARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINV-------------------- 154
Query: 246 SVLIRNGLVKEAHSYLEKYPYSNIASWTN-VIVGYFEMGEVGSAIKVFE-LMTTRDVTVW 303
GL+++ H+ + S N +I Y + G + A ++F L RD W
Sbjct: 155 ------GLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSW 208
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
N M+ ++ G + L+ +++M G D T SVLT +++ L G Q HA+ IK
Sbjct: 209 NSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIK 268
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLE-FSSVPIHDIISWNSIICGLA-YHGYAEKAL 421
+Q + V + +I +Y++CG + F + D++ WN++I G + Y +++AL
Sbjct: 269 SGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEAL 328
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
E F ++++ +PDD + V V+SACS QGR R + ++ +
Sbjct: 329 ECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAM 388
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL--EPN 539
+ G + +A L + + E + + +++ H +R++E+ P
Sbjct: 389 YSKCGNLRDAKTLFDTMP----EHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPT 444
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKEN-GVKKEPG 577
N +L + GR ED K F MK+ G++ E G
Sbjct: 445 NITFISVLAACAHT-GRVEDGKIYFNMMKQKFGIEPEAG 482
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 203/490 (41%), Gaps = 67/490 (13%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
R+ A+ +FD + ++N +I Y K +++ A LF++MP+ D +YNT+IA +
Sbjct: 58 RLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYAR 117
Query: 65 SDNVQGAKEVF----------DGMEVRDVVTW---------------------------N 87
+ Q A ++F DG + ++T N
Sbjct: 118 RGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGN 177
Query: 88 SMISGYVCNGLIDEALRVFHGMPL-KDVVSWNLVIGALVNCQRMDLAESYFKEMGAR--- 143
++I+ Y NG + EA R+FH + +D VSWN ++ A + + A + EM R
Sbjct: 178 ALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLI 237
Query: 144 -DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD-----NGCVGVAED 197
D+ + ++ ++ + K+ + + +G +D GC+
Sbjct: 238 VDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRK 297
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRI-DAAISYFKQM------PETCEKTWN-SIISVLI 249
+F ++ + DL W +I+G + D A+ F+Q+ P+ C S S +
Sbjct: 298 VFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMS 357
Query: 250 RNGLVKEAHSYLEKY--PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
++ H K P + I+ +I Y + G + A +F+ M + +N MI
Sbjct: 358 SPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMI 417
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
G ++ +G + L F +M E G +P N TF SVL C+ ++ G+ + +
Sbjct: 418 AGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIY----FNMMKQ 473
Query: 368 QFTTVSNA-----MITMYARCGNIQSALLEFSSVPIHD-IISWNSIICGLAYHGYAEKAL 421
+F A MI + R G + A ++P W++++ HG E A+
Sbjct: 474 KFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAI 533
Query: 422 ELFERMRLTD 431
+ R+ D
Sbjct: 534 KAANRLLQLD 543
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 32/220 (14%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAG 61
+++A+ LFD MP+ +TV++N MI GY ++G ++ LF +M E T+ +V+A
Sbjct: 395 LRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAA 454
Query: 62 LMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD-VV 115
+ V+ K F+ M+ + + ++ MI G + EA R+ +P
Sbjct: 455 CAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFF 514
Query: 116 SWNLVIGALV---NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
W+ ++GA N + A + ++ + A + ++ N GR+ +A + M
Sbjct: 515 FWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMR 574
Query: 173 AKDVQAWNLMIAGYLDNGC----------VGVAEDLFQKM 202
+ V+ GC + VAED F M
Sbjct: 575 DRGVKK---------KPGCSWIEVNRRIHIFVAEDTFHPM 605
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F L C L G+ +HA IK T +SN + +Y++C + +A F
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
++ S+N++I A Y E A +LF+ M +PD +++ +++A + G
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRG 119
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 186/550 (33%), Positives = 281/550 (51%), Gaps = 37/550 (6%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
A+++FD + ++ WNSM GY + E + +F M D+ NC
Sbjct: 152 ARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRP---------NCFTF 202
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL---FDKMPAKDVQAWNLMIAGYL 187
+ K G +N L+ EG V + F P ++ AG
Sbjct: 203 PVV---LKSCGK---------INALI-EGEQVHCFLIKCGFRGNPFVGTTLIDMYSAG-- 247
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
G VG A +F +M +R++ +W +ING + S + +A F PE WN ++S
Sbjct: 248 --GTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSG 305
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
I G + EA + P ++ W V+ GY G V + +FE M R++ WN +I
Sbjct: 306 YIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALI 365
Query: 308 FGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
G N L E L F +M ES P++AT +VL+ C+ L LDLG+ +H A
Sbjct: 366 GGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGL 425
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
V NA++ MYA+CG I++A+ F + D+ISWN++I GLA H AL LF +
Sbjct: 426 KGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQ 485
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
M+ KPD ITF+G+L AC++ GLV+ G YF M + Y + P+ HY C+VD+L R G
Sbjct: 486 MKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAG 545
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
+++A +R +E +W LLGACRI+ N+++ E+A +R++ELEP N Y++
Sbjct: 546 RLEQAXAF---VRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVM 602
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHR---- 602
L+ +Y GR ED R+ M++ G KK PGCS I++ND F S D HP+
Sbjct: 603 LSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGV 662
Query: 603 LRYLLNLLHT 612
LR L+ +L +
Sbjct: 663 LRGLVKVLRS 672
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 209/463 (45%), Gaps = 45/463 (9%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTV-- 58
R+ A+ LFD++P + WN M RGY ++ + LF QM D+ FT+ V
Sbjct: 148 RMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLK 207
Query: 59 ----IAGLMQSDNVQG--AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
I L++ + V K F G + ++I Y G + +A ++F M +
Sbjct: 208 SCGKINALIEGEQVHCFLIKCGFRG----NPFVGTTLIDMYSAGGTVGDAYKIFCEMFER 263
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
+VV+W +I + + A F RDV W IMV+G + G +VEARKLF +MP
Sbjct: 264 NVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMP 323
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+DV WN ++ GY NG V E LF++M +R++ SW LI G ++ + FK+
Sbjct: 324 NRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKR 383
Query: 233 MPETCEKTWN-----SIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVG------ 278
M + N +++S R G L K H Y E NV VG
Sbjct: 384 MLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKG-----NVYVGNALMDM 438
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G + +AI VF M T+D+ WN +I GL + G + L F QMK +G PD TF
Sbjct: 439 YAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITF 498
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS----NAMITMYARCGNIQSALLEFS 394
+L C+ + ++ G A +A + M+ M AR G ++ A
Sbjct: 499 IGILCACTHMGLVEDG---FAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVR 555
Query: 395 SVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+P+ D + W ++ A Y L RL + +P +
Sbjct: 556 KMPVEADGVIWAGLLG--ACRIYKNVELAELALQRLIELEPKN 596
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 126/266 (47%), Gaps = 30/266 (11%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
+A + A+ LFD P+RD V WN+M+ GY + G + A LF +MP RD+ +NTV+ G
Sbjct: 278 SADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGY 337
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN--LV 120
+ NV+ + +F+ M R++ +WN++I GY NGL E L F M + V N +
Sbjct: 338 ATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATL 397
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ L C R +GA D+ W + E+ L +V N
Sbjct: 398 VTVLSACAR----------LGALDLGKWVHVY---------AESSGL-----KGNVYVGN 433
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK- 239
++ Y G + A +F+ M +DL SW LI GL R A++ F QM +K
Sbjct: 434 ALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKP 493
Query: 240 ---TWNSIISVLIRNGLVKEAHSYLE 262
T+ I+ GLV++ +Y +
Sbjct: 494 DGITFIGILCACTHMGLVEDGFAYFQ 519
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 106/254 (41%), Gaps = 16/254 (6%)
Query: 326 MKESGPSPDNA---TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITM 379
+ G SP T++ + ++ + +Q+H +I N F ++ ++T+
Sbjct: 83 LNPCGRSPTGGGHLRLTALRCLRENMRSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTI 142
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
A + A F +P +I WNS+ G A + + LF +M+ D +P+ TF
Sbjct: 143 CATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTF 202
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
VL +C + +G C K + T ++D+ G + +A + E+
Sbjct: 203 PVVLKSCGKINALIEGE-QVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEM- 260
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGV-YLILTEMYLSCGRRE 558
E + W +++ + ++ ++ R+ +L P V + I+ Y+ G
Sbjct: 261 ---FERNVVAWTSMINGYILSADL----VSARRLFDLAPERDVVLWNIMVSGYIEGGDMV 313
Query: 559 DAKRIFAQMKENGV 572
+A+++F +M V
Sbjct: 314 EARKLFXEMPNRDV 327
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 191/658 (29%), Positives = 336/658 (51%), Gaps = 68/658 (10%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVI---AGL-- 62
+FD+M +R+ VTWN +I + G ++A+ LF +M E + F +++ AGL
Sbjct: 333 VFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLAD 392
Query: 63 ---------------MQSDNVQG---------------AKEVFDGMEVRDVVTWNSMISG 92
+ SD + G A +VF + R+ V++N++++G
Sbjct: 393 IGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAG 452
Query: 93 YVCNGLIDEALRVFHGMPLKDVVSWN----LVIGALVNCQRMD-----LAESYFKEMGAR 143
YV G +EAL ++H M +D + + + L QR D + + +
Sbjct: 453 YVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITK 512
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
++ T +V+ GR+ A+++F++M ++ +WN MI GY NG A LF++M
Sbjct: 513 NIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQ 572
Query: 204 ----DRDLTSWKQLINGLVN------SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
D S +++ V+ R + I E + ++ + + G
Sbjct: 573 LNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQV--VLVDMYAKCGS 630
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
+ A ++ ++ ++ + G A +F+ M R+ +WN ++ G
Sbjct: 631 MDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANK 690
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA-RNQFTTV 372
L +E F++M ES D T +++ +CS LP L+ G Q+H+ IK N +
Sbjct: 691 GLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVL 750
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
A++ MY++CG I A F ++ +I+SWN++I G + HG +++AL L+E M
Sbjct: 751 ETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGM 810
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
P+++TF+ +LSACS+ GLV++G F M+ Y ++ ++ HYTC+VDLLGR G +++A
Sbjct: 811 YPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAK 870
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
+ ++ IE + WGALLGACR+H ++ +G +A +R+ EL+P N G Y+I++ +Y
Sbjct: 871 EFVEKM---PIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYA 927
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK----FHRLRYL 606
+ GR ++ + I MK GVKK+PG SWI+IN +F +G +HPK ++ LR+L
Sbjct: 928 AAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHL 985
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 140/600 (23%), Positives = 270/600 (45%), Gaps = 53/600 (8%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGLMQ 64
A+ LF++MP+R+ WN MI Y + + L+ +M D FT+ +VI +
Sbjct: 128 ARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIA 187
Query: 65 SDNVQGAKE-----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+++ G ++ V G+ ++ +++ GY G +D+A+ + VV+WN
Sbjct: 188 MEDMGGVRQLQSSVVKAGLNC-NLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNA 246
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK----- 174
VI V + A F M V +R + +R ++ +K
Sbjct: 247 VIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACG 306
Query: 175 ---DVQAWNLMIAGYL----DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
D N +I Y + C+ V F +M +R+ +W +I+ + A+
Sbjct: 307 FKGDTFVGNALIDMYAKCDDEESCLKV----FDEMGERNQVTWNSIISAEAQFGHFNDAL 362
Query: 228 SYFKQMPETCEKTWN-SIISVLIRN------GLVKEAHSYL-EKYPYSNIASWTNVIVGY 279
F +M E+ K+ ++ S+L+ + G +E H +L S+I + ++ Y
Sbjct: 363 VLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMY 422
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK-ESGPSPDNATF 338
+ G V A +VF + R+ +N ++ G + EE L+ + M+ E G PD TF
Sbjct: 423 SKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTF 482
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
T++LT+C++ + GRQIHA I+ + V ++ MY+ CG + A F+ +
Sbjct: 483 TTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAE 542
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
+ SWNS+I G +G ++AL LF++M+L KPD + +LS+C +GR
Sbjct: 543 RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGREL 602
Query: 459 F-----DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+ M+ + LQ +VD+ + G +D A + ++ + ++ + A
Sbjct: 603 HNFIVRNTMEEEGILQ------VVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAF 656
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
+ + R ++ A ++E N+ ++ + Y + G ++++ F +M E+ ++
Sbjct: 657 VNSGRAND-------AKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIE 709
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 144/650 (22%), Positives = 252/650 (38%), Gaps = 117/650 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER--------- 50
+ +A D++ VTWN +I GY K + A +F++M P+
Sbjct: 226 MDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRV 285
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
D F N +I + D+ + +VFD M R+ VTW
Sbjct: 286 CGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTW 345
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC--------QRMDLAESYFK 138
NS+IS G ++AL +F M S +G+++ + +L +
Sbjct: 346 NSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVR 405
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+ D+ + +V+ + G + EA ++F + ++ ++N ++AGY+ G A +L
Sbjct: 406 NLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALEL 465
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN-----SIISVLIRNGL 253
+ M D Q F + C N I + LIR +
Sbjct: 466 YHDMQSEDGIQPDQFT---------------FTTLLTLCANQRNDNQGRQIHAHLIRANI 510
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
K NI T ++ Y E G + A ++F M R+ WN MI G +N
Sbjct: 511 TK------------NIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQN 558
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
+E L+ F QM+ +G PD + +S+L+ C L GR++H ++ + +
Sbjct: 559 GETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ 618
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIIS------------------------------ 403
++ MYA+CG++ A + D+I
Sbjct: 619 VVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTA 678
Query: 404 -WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
WNSI+ G A G +++ F M +D + D +T V +++ CS ++ G +
Sbjct: 679 LWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLI 738
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
K F+ T +VD+ + G I +A + + + I W A++ H
Sbjct: 739 IKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNI----VSWNAMISGYSKHGC 794
Query: 523 IKVGEIAGERVME--LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
K I E + + + PN IL+ + G E+ RIF M+E+
Sbjct: 795 SKEALILYEEMPKKGMYPNEVTFLAILSACSHT-GLVEEGLRIFTSMQED 843
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 183/428 (42%), Gaps = 46/428 (10%)
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EK 239
+G LD+ C A LF++M +R+LT+W +I + + +M + +
Sbjct: 119 SGCLDDLCY--ARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKF 176
Query: 240 TWNSIISVLIRN---GLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELM 295
T+ S+I I G V++ S + K + N+ ++ GY G + A+ + +
Sbjct: 177 TFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEI 236
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
V WN +I G + EE F +M + G PDN TF S L +C L + D G+
Sbjct: 237 EGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGK 296
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
Q+H++ I T V NA+I MYA+C + +S L F + + ++WNSII A G
Sbjct: 297 QVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFG 356
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR------------------- 456
+ AL LF RM+ + +K + +L A AGL D G+
Sbjct: 357 HFNDALVLFLRMQESGYKSNRFNLGSILMAS--AGLADIGKGRELHGHLVRNLLNSDIIL 414
Query: 457 ------YYFDC-------MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA-DG 502
Y C + L+ Y ++ + G +EA+ L +++++ DG
Sbjct: 415 GSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDG 474
Query: 503 IEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
I+ + LL C N G +I + N V L MY CGR AK
Sbjct: 475 IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAK 534
Query: 562 RIFAQMKE 569
IF +M E
Sbjct: 535 EIFNRMAE 542
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 183/426 (42%), Gaps = 73/426 (17%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVI 59
R+ A+ +F++M +R+ +WN MI GY +NG A+ LF QM + D F+ ++++
Sbjct: 528 GRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSML 587
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNS-----MISGYVCNGLIDEALRVFHGMPLKDV 114
+ + + Q +E+ + + VR+ + ++ Y G +D A +V+ KDV
Sbjct: 588 SSCVSLSDSQKGRELHNFI-VRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDV 646
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
+ N+++ A VN R + A++ F +M R+ A W ++ G +G E+ F +M
Sbjct: 647 ILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLES 706
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
D++ ++++ + N C + L QL + ++ ++ ++ +
Sbjct: 707 DIE-YDVLTMVTIVNLCSSLPA----------LEHGDQLHSLIIKKGFVNCSV-----VL 750
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFEL 294
ET +++ + + G + +A + + NI SW +I GY + G
Sbjct: 751 ET------ALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHG----------- 793
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+E L + +M + G P+ TF ++L+ CS ++ G
Sbjct: 794 --------------------CSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEG 833
Query: 355 RQIHAQA-----IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSII 408
+I I+ +T M+ + R G ++ A +PI ++ +W +++
Sbjct: 834 LRIFTSMQEDYNIEAKAEHYT----CMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL 889
Query: 409 CGLAYH 414
H
Sbjct: 890 GACRVH 895
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 50/233 (21%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTV 58
+ R +A+NLFD+M QR+T WN ++ GY G + F +M E D+ T T+
Sbjct: 659 SGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTI 718
Query: 59 I------AGLMQSDNVQG------------------------------AKEVFDGMEVRD 82
+ L D + A+ VFD M ++
Sbjct: 719 VNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKN 778
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDLAES---YFK 138
+V+WN+MISGY +G EAL ++ MP K + + A+++ C L E F
Sbjct: 779 IVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFT 838
Query: 139 EMG-----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAG 185
M +T MV+ L R GR+ +A++ +KMP + +V W ++
Sbjct: 839 SMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGA 891
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 17/187 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMF----TYNTVIAG 61
I +A+ +FD M ++ V+WN MI GY K+G A+ L+ +MP++ M+ T+ +++
Sbjct: 764 ITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSA 823
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLK-D 113
+ V+ +F M+ + + Y C G +++A MP++ +
Sbjct: 824 CSHTGLVEEGLRIFTSMQ--EDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPE 881
Query: 114 VVSWNLVIGALVNCQRMD---LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
V +W ++GA + MD LA E+ ++ + IM N GR E +
Sbjct: 882 VSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQM 941
Query: 171 MPAKDVQ 177
M K V+
Sbjct: 942 MKMKGVK 948
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS---ALLEFS 394
++S++ C D + G+ IH Q I N + ++ +YAR G + A F
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+P ++ +WN++I A + L L+ RMR + D TF V+ AC + D
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKAC--IAMEDM 191
Query: 455 GRY-YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
G K L +VD RFG +D+A+ L+EI S W A+
Sbjct: 192 GGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEG----TSVVTWNAV 247
Query: 514 LGA 516
+
Sbjct: 248 IAG 250
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 193/645 (29%), Positives = 330/645 (51%), Gaps = 41/645 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ ++EA+N+FD MP ++ V+W MI GY + G DNA+ L+ QM D FT+ +
Sbjct: 145 KCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGS 204
Query: 58 VIAGLMQSDNVQGAKE----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
++ D+ + A++ V D++ N++IS Y + +A+ VF + +KD
Sbjct: 205 IVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKD 264
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
++SW +I A +F+EM ++ V N V KL +
Sbjct: 265 LISWGSMIAGFSQLGYELEALCHFREMLSQSV----YQPNEFVFGSAFSACSKLLEPDCG 320
Query: 174 KDVQAWNL-------MIAG------YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ + + + AG Y G + A +F + DL +W +I G +
Sbjct: 321 RQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASV 380
Query: 221 RRIDAAISYFKQMPETC----EKTWNSII-----SVLIRNGLVKEAHSYLEKYPYS-NIA 270
+ S+F QM T + T S++ V++ +G+ + HSY+ K ++ +I
Sbjct: 381 SNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGI--QVHSYIVKMGFNLDIP 438
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
+++ Y + + A++VFE + + D+ WN ++ + + E L+ M S
Sbjct: 439 VCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFAS 498
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
PD+ T T+VL + + ++G QIH +K N +VSNA+I MY +CG+++ A
Sbjct: 499 RIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECA 558
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F S+ DIISW+S+I G A G ++A ELF MR KP++ITFVG+L+ACS+
Sbjct: 559 RKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHI 618
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
G+V++G + M+ Y + P H +C+VDLL R G +D A + + ++ V
Sbjct: 619 GMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQM---PFVPDVVV 675
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
W LL AC++H N++VG+ A E V++++P+NS ++L ++ S G +D R+ + M+
Sbjct: 676 WKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRR 735
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
V K PG SWI+I D HVFL+ D+ HP+ ++ +L L +I
Sbjct: 736 MDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQI 780
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 116/265 (43%), Gaps = 30/265 (11%)
Query: 195 AEDLFQKMHDRDLTS--WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A D+FQK L S + LIN + R ++ + M TC + I+
Sbjct: 84 AFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHM-LTCNYQPDMILQ------ 136
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+++ Y + G + A +F+ M ++V W MI G
Sbjct: 137 --------------------NHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSR 176
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
+ + +VQM SG PD+ TF S++ CS L L RQ+HA +K
Sbjct: 177 YGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIA 236
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF-ERMRLTD 431
NA+I+MY + + A+ FS + I D+ISW S+I G + GY +AL F E + +
Sbjct: 237 QNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSV 296
Query: 432 FKPDDITFVGVLSACSYAGLVDQGR 456
++P++ F SACS D GR
Sbjct: 297 YQPNEFVFGSAFSACSKLLEPDCGR 321
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSP-DNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
I L + +L E LK F ++ SP + T+T ++ CS L +L+ GR+IH +
Sbjct: 69 IISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCN 128
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
+ N +++MY +CG+++ A F S+P+ +++SW S+I G + +G + A+ L+
Sbjct: 129 YQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYV 188
Query: 426 RMRLTDFKPDDITFVGVLSACS 447
+M + PD TF ++ +CS
Sbjct: 189 QMLRSGHIPDHFTFGSIVKSCS 210
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 179/620 (28%), Positives = 316/620 (50%), Gaps = 56/620 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R ++EAQ LF++MP+R+ +WN MI GY K+G ++ LF+ MP +D F++N VI+G
Sbjct: 54 RCNSMREAQQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISG 113
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-------DV 114
+ N++ A+ +F+ M ++ + WNSMI GY CNG EA+ +F + L D
Sbjct: 114 FAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDT 173
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDK 170
V+GA N +D + + +V +++ + LV + G I A + +
Sbjct: 174 FVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNL 233
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
M D + + +I+GY G + A +F + + W +I+G V + A+ F
Sbjct: 234 MKEPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELF 293
Query: 231 KQM-PETCEKTWNSIISVL--------IRNGLVKEAHSY--------------LEKYP-- 265
M + ++ +++ SVL I G+ AH Y ++ Y
Sbjct: 294 NNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKC 353
Query: 266 ---------YSNIASWTNVIVG-----YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
+S++ ++ +++ Y G + A ++F+ M ++ + WN MI G
Sbjct: 354 RRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFS 413
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+N E L F +M + G D + V++ C+ + +L+LG QI A+A I
Sbjct: 414 QNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQI 473
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
+S +++ Y +CG ++ F + D + WNS++ G A +G+ +AL +F++MR
Sbjct: 474 ISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVG 533
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
+P DITFVGVLSAC + GLV++GR +F MK Y + P HY+C+VDL R GL+++A
Sbjct: 534 VQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDA 593
Query: 492 MNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMY 551
MNL+ ++ ++ ++W ++L C H N +G+ +R+++L+P NSG Y+ L+ +Y
Sbjct: 594 MNLIEQM---PLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIY 650
Query: 552 LSC---GRREDAKRIFAQMK 568
+ GR +++ K
Sbjct: 651 ATFEDWGRSAQVRKLMYDKK 670
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 185/594 (31%), Positives = 298/594 (50%), Gaps = 38/594 (6%)
Query: 31 YFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMI 90
Y + G ++++ +F + ++++ ++N + ++ ++ A++VFD M RDVV+WN+MI
Sbjct: 755 YSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMI 814
Query: 91 SGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTI 150
SGYV GL D+A R F M Q+ + S F ++
Sbjct: 815 SGYVSFGLFDDAFRFFSEM------------------QKAGIRPSGFT------YSTLLS 850
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
V+ R G+ + A + + + +V N +I Y G V A +F M + D+ SW
Sbjct: 851 FVSSACR-GKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISW 909
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVL-----IRNGLVKEAHSYL 261
LI S + A+ F M + T +++I+V + G A
Sbjct: 910 NSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIR 969
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
+ ++I S ++ + + + + +++VFE + D + N MI + GE L+
Sbjct: 970 VGFLSNSIVSSASIDL-FSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQ 1028
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
FV P T + VL+ S L +D G QIH+ +K V+++++ MYA
Sbjct: 1029 LFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYA 1088
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+ G I SA+ F+ + D+ISWN++I GLAY+G KALE+F+ + + PD+IT G
Sbjct: 1089 KFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAG 1148
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
VL AC+ GLVD+G F M+ +Y + P HY C+VD++ R G + EAM+++ +
Sbjct: 1149 VLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPH- 1207
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
E S +WG+LL AC I+ +++ E ERVMELEP +S YL+L + Y GR E
Sbjct: 1208 --EPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLV 1265
Query: 562 RIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
R+ MKE GV+K GCSWI I + VF H + ++L LL EIE
Sbjct: 1266 RVXRAMKEKGVRKVIGCSWIGIKNHVFVFKENQLLHIGGKDIYFILRLLIQEIE 1319
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 213/467 (45%), Gaps = 57/467 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYN 56
+R ++ A+++FD+MP+RD V+WN MI GY G D+A F++M + + FTY+
Sbjct: 787 VRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYS 846
Query: 57 TVIAGLMQSDNVQG----AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
T+++ + S +G A + +G+++ +VV NS+I Y G++D A VF M
Sbjct: 847 TLLSFV--SSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEEL 904
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
D++SWN +I + +LA F M + + V+ + I L D
Sbjct: 905 DIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTV-----ITVCSNLQDLEK 959
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAE-DLFQKMHD--------RDLTSWKQ-LINGLVNS-- 220
+ + A + + G+L N V A DLF K + ++ W L N +++S
Sbjct: 960 GEQIFALCIRV-GFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYA 1018
Query: 221 ------RRIDAAISYFKQMPETCEKTWN---SIISVLIRNGLVKEAHSYLEKYPY-SNIA 270
+ + ++ E T + S +S+L+ + HS + K S++
Sbjct: 1019 WHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVI 1078
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
++++ Y + G + SA+K F + RD+ WN MI GL N + L+ F ++ G
Sbjct: 1079 VASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGG 1138
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-----NAMITMYARCGN 385
P PD T VL C+ +D G I + K ++ + ++ M +R G
Sbjct: 1139 PPPDEITLAGVLLACNVGGLVDEGLSIFSSMEK----EYGVIPAIEHYACIVDMMSRGGK 1194
Query: 386 IQSALLEFSSVPIHDI--ISWNSIICGLAYHG-------YAEKALEL 423
++ A+ +P H+ + W S++C +G AE+ +EL
Sbjct: 1195 LKEAMDIVELMP-HEPSGLIWGSLLCACEIYGDLRFTERVAERVMEL 1240
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 132/548 (24%), Positives = 236/548 (43%), Gaps = 88/548 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ + LFD+M + D V WN M+ GY NG A+ +F+QM + + G++ +
Sbjct: 488 VEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSA 547
Query: 66 DN----VQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLK-DVV 115
+ V+ ++ F M++ + ++ M+ Y GL+++A+ + MPLK D
Sbjct: 548 CDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTS 607
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDV--ASWTIMVNGLVRE----GRIVEARKL-F 168
W+ V+ V L + K + D + + ++G+ GR + RKL +
Sbjct: 608 MWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMY 667
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ---LINGLVNSRRIDA 225
DK KD + IAG + G G++ + +++T KQ L+ LV ++
Sbjct: 668 DKKIPKDT---SFDIAG--EEGXEGLSSE------TKEVTKMKQRQNLVLRLVAEKK--- 713
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVK---EAHSYLEKYPYSNIASWTNVIVGYFEM 282
++ E +K + ++L + L+K H++L + Y ++
Sbjct: 714 -----RECDERDQKFMAARRTLLEFDMLIKVGFNTHTFLG----------NRCLDLYSQL 758
Query: 283 GEVGSAIKVFE-------------------------------LMTTRDVTVWNVMIFGLG 311
G +++VFE M RDV WN MI G
Sbjct: 759 GTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYV 818
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN-QFT 370
L ++ +FF +M+++G P T++++L+ S G+QIHA I+ +
Sbjct: 819 SFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSACR---GKQIHASMIRNGVDLSNV 875
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
V N++I MY + G + A F ++ DIISWNS+I GY AL F MR
Sbjct: 876 VVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSV 935
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
+ PD T V++ CS +++G F FL S + +DL + +++
Sbjct: 936 GYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLS-NSIVSSASIDLFSKCNRLED 994
Query: 491 AMNLLNEI 498
++ + EI
Sbjct: 995 SVRVFEEI 1002
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 113/268 (42%), Gaps = 36/268 (13%)
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIA-RNQFTTVSNAMITMYARCGNIQSALLE 392
D + L C++ ++ GR +H +K + ++ N ++ MY+RC +++ A
Sbjct: 5 DLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQL 64
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F +P + SWN++I G G K+LELF+ M D ++ V+S + G +
Sbjct: 65 FEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMP----HKDAFSWNVVISGFAKEGNL 120
Query: 453 DQGRYYFDCM--KNKYFLQPRSAHYTCVVDLLGRFGLI-DEAMNLLNEIRADGIEVSPTV 509
+ R F+ M KN Y C GL D ++N L D ++ V
Sbjct: 121 EVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVV 180
Query: 510 -----WGALLGACRIHNNIKVGEIAGERVM------------ELEPNNSGVYLI------ 546
GAL +IH I V E+ + V+ +++ N + L+
Sbjct: 181 GACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAF 240
Query: 547 ----LTEMYLSCGRREDAKRIFAQMKEN 570
L Y SCGR DA+RIF +K N
Sbjct: 241 SLSALISGYASCGRMNDARRIFC-LKSN 267
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 167/474 (35%), Positives = 276/474 (58%), Gaps = 16/474 (3%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
+V G V++ R+V + K N +I Y+ G + A +LF +M DR++ SW
Sbjct: 27 LVRGAVQQARLVHEHVFSNGYEPKTFLI-NTLINMYVKFGLLDEARNLFDEMPDRNVVSW 85
Query: 211 KQLINGLVNS----RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV--KEAH-SYLEK 263
+I+ NS + +D I ++ T++S++ +GL+ ++ H S L+
Sbjct: 86 TTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRAC--DGLLNLRQLHGSILKV 143
Query: 264 YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
S++ + +I Y ++GE A+ VF M T D+ VWN +I G +N G+E L +
Sbjct: 144 GLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLY 203
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
+MK + D +T TSVL C+ L L+LGRQ+H +K +Q ++NA++ MY +C
Sbjct: 204 KRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKY--DQDLILNNALLDMYCKC 261
Query: 384 GNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
G+++ A L F+ + D+ISW+++I GLA +G++ AL+LFE M+ KP+ IT +GV
Sbjct: 262 GSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGV 321
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
L ACS+AGLV+ G YYF MK + + P HY C++DLLGR G +DEA+ L++E+
Sbjct: 322 LFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNH-- 379
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
E W LLGACR+H N+ + A + +++L+P ++G Y++L+ +Y + + ED
Sbjct: 380 -EPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAE 438
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+ +M+ GVKK+PGCSWI+++ H F+ GD+SHP+ ++ L+ L + R
Sbjct: 439 VRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMR 492
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 139/314 (44%), Gaps = 20/314 (6%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRV 105
D TY+ +I + VQ A+ V + G E + + N++I+ YV GL+DEA +
Sbjct: 15 DAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLI-NTLINMYVKFGLLDEARNL 73
Query: 106 FHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE-GRIVEA 164
F MP ++VVSW +I A N A + M V + ++R ++
Sbjct: 74 FDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL 133
Query: 165 RKLFDKMPA----KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
R+L + DV + +I Y G A ++F +M DL W +I G +
Sbjct: 134 RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQN 193
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIR--NGLV-----KEAHSYLEKYPYSNIASWT 273
D + +K+M S ++ ++R GL ++ H ++ KY I +
Sbjct: 194 SDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILN-N 252
Query: 274 NVIVGYFEMGEVGSAIKVF-ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
++ Y + G + A +F +MT +DV W+ MI GL +N + LK F MK GP
Sbjct: 253 ALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPK 312
Query: 333 PDNATFTSVLTICS 346
P+ T VL CS
Sbjct: 313 PNYITILGVLFACS 326
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 28/279 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGF----LDNAMCLFNQMPERDMFTYNTVIA- 60
+ EA+NLFD+MP R+ V+W MI Y + LD + + + +M+TY++V+
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 61 --GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
GL+ + G+ + G+E DV +++I Y G +AL VF+ M D+V WN
Sbjct: 127 CDGLLNLRQLHGSI-LKVGLE-SDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWN 184
Query: 119 LVIGALVNCQRMDLAESYFKEMGARD-VASWTIMVN--------GLVREGRIVEARKL-F 168
+IG D +K M D VA + + + L+ GR V L +
Sbjct: 185 SIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKY 244
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK-MHDRDLTSWKQLINGLVNSRRIDAAI 227
D +D+ N ++ Y G + A LF + M ++D+ SW +I GL + A+
Sbjct: 245 D----QDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADAL 300
Query: 228 SYFKQMPETCEK-TWNSIISVLI---RNGLVKEAHSYLE 262
F+ M K + +I+ VL GLV + Y +
Sbjct: 301 KLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQ 339
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 155/371 (41%), Gaps = 34/371 (9%)
Query: 10 QNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQ 69
+++F + T N +I Y K G LD A LF++MP+R++ ++ T+I+ S+
Sbjct: 40 EHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNH 99
Query: 70 GAKEVFDGM---EVR-DVVTWNSMISGYVCNGLIDEALRVFHGMPLK-----DVVSWNLV 120
A + M VR ++ T++S++ C+GL++ LR HG LK DV + +
Sbjct: 100 KALDFLILMLREGVRPNMYTYSSVLRA--CDGLLN--LRQLHGSILKVGLESDVFVRSAL 155
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I A + F EM D+ W ++ G + E L+ +M D A
Sbjct: 156 IDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQ 215
Query: 181 LMIAGYLDNGCVGVA-EDLFQKMH------DRDLTSWKQLINGLVNSRRI-DAAISYFKQ 232
+ L C G+A +L +++H D+DL L++ + DA + + +
Sbjct: 216 STLTSVL-RACTGLALLELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANLLFTRM 274
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLE----KYPYSNIASWTNVIVGYFEMGEVGSA 288
M E +W+++I+ L +NG +A E K P N + V+ G V
Sbjct: 275 MTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDG 334
Query: 289 IKVFELMTTR-----DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
F+ M + +I LG +E +K +M PD T+ +L
Sbjct: 335 WYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNH---EPDAVTWRILLG 391
Query: 344 ICSDLPTLDLG 354
C +DL
Sbjct: 392 ACRVHKNVDLA 402
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 112/284 (39%), Gaps = 46/284 (16%)
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
+K M + S D T++ ++ C + R +H T + N +I M
Sbjct: 1 MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y + G + A F +P +++SW ++I + KAL+ M +P+ T+
Sbjct: 61 YVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY 120
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI- 498
VL AC GL++ + + + K L+ + ++D + G +A+N+ NE+
Sbjct: 121 SSVLRACD--GLLNLRQLHGSIL--KVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMI 176
Query: 499 -------------------------------RADGIEVSPTVWGALLGACRIHNNIKVGE 527
RAD + T+ ++L AC +++G
Sbjct: 177 TGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTL-TSVLRACTGLALLELGR 235
Query: 528 IAGERVMELEP----NNSGVYLILTEMYLSCGRREDAKRIFAQM 567
V++ + NN+ L +MY CG EDA +F +M
Sbjct: 236 QVHVHVLKYDQDLILNNA-----LLDMYCKCGSLEDANLLFTRM 274
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 6 IQEAQNLFDKM-PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI- 59
+++A LF +M ++D ++W+ MI G +NGF +A+ LF M P+ + T V+
Sbjct: 264 LEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLF 323
Query: 60 ----AGLMQSD--NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK- 112
AGL+ Q KE F R+ + +I G +DEA+++ H M +
Sbjct: 324 ACSHAGLVNDGWYYFQSMKEHFGIDPGRE--HYGCIIDLLGRAGKLDEAVKLIHEMNHEP 381
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKE---MGARDVASWTIMVNGLVREGRIVEARKLFD 169
D V+W +++GA + +DLA KE + D ++ ++ N + + ++
Sbjct: 382 DAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRR 441
Query: 170 KMPAKDVQ 177
KM + V+
Sbjct: 442 KMRTRGVK 449
>gi|302819822|ref|XP_002991580.1| hypothetical protein SELMODRAFT_478 [Selaginella moellendorffii]
gi|300140613|gb|EFJ07334.1| hypothetical protein SELMODRAFT_478 [Selaginella moellendorffii]
Length = 560
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 159/544 (29%), Positives = 275/544 (50%), Gaps = 9/544 (1%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDN 67
EA +F+ +P+R TV M+ Y +N L+ + +F+++PERD ++ +++ + +
Sbjct: 20 EAVRMFEIVPERSTVAMTSMVVAYAENDALEISKVMFDRIPERDPVSWTALLSVNATNGH 79
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC 127
+ +FD M R W +M+S Y +G ++ F MP + VSWN ++GA
Sbjct: 80 LVEVINIFDRMPKRSWRCWQTMLSAYSDHGDLENTKLTFATMPYRGSVSWNALLGAYAQT 139
Query: 128 QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
++ A+ +F M D SWTI+ + G I E+R FD +P +D+ +WN +++ Y
Sbjct: 140 GHLESAKEFFDRMPQCDTVSWTIVSEAYAQRGHIQESRWFFDNVPDRDLVSWNSIMSAYA 199
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
+ A +F+ + ++ SW +I + D A F +MP +WN++++
Sbjct: 200 RRALIDDARRVFEGILRPNVFSWNTMIAAYTQNGHFDEARRVFGEMPRKNVVSWNTLLAA 259
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE---VGSAIKVFELMTTRDVTVWN 304
G++ EA ++ P ++ SW +++ Y + G V +A ++F+ M RD+ WN
Sbjct: 260 YSERGMLCEAKEMFDRMPQKDVISWNSLVTAYAQNGHILRVAAAREIFDTMRERDLISWN 319
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
MI ++ GEEG+ F M G +PD+ T +VL C+ +L+ G+ IHA
Sbjct: 320 TMIAAYAQSGDGEEGIHLFRIMDLYGEAPDSITLIAVLDACTAARSLERGKTIHAAIRAG 379
Query: 365 ARNQFTT---VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
R TT V A++ MY G ++ A+ F + D+ +W ++I A +G+ AL
Sbjct: 380 TRLDLTTHLLVLTALVNMYGNLGCVELAMEAFQGIQRRDVTAWTAVIVAHARNGHGGAAL 439
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
ELF L +PD + F+ +L+ACS+AGL+ GR +F + Y + HY CV+D+
Sbjct: 440 ELFREFGLEGMQPDAVAFLSILTACSHAGLLYSGRDFFVALHGDYNVGVTLEHYRCVIDM 499
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LGR G ++ A + IR + W LLGAC+ + G+ E L+P +
Sbjct: 500 LGRLGQLELAEEV---IRGMPFKADFVSWVTLLGACKTQGDAHRGQRVAEAASSLDPGVA 556
Query: 542 GVYL 545
Y+
Sbjct: 557 SPYV 560
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 206/472 (43%), Gaps = 51/472 (10%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
N + E N+FD+MP+R W M+ Y +G L+N F MP R ++N ++
Sbjct: 77 NGHLVEVINIFDRMPKRSWRCWQTMLSAYSDHGDLENTKLTFATMPYRGSVSWNALLGAY 136
Query: 63 MQSDNVQGAKEVFDGMEV-------------------------------RDVVTWNSMIS 91
Q+ +++ AKE FD M RD+V+WNS++S
Sbjct: 137 AQTGHLESAKEFFDRMPQCDTVSWTIVSEAYAQRGHIQESRWFFDNVPDRDLVSWNSIMS 196
Query: 92 GYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIM 151
Y LID+A RVF G+ +V SWN +I A D A F EM ++V SW +
Sbjct: 197 AYARRALIDDARRVFEGILRPNVFSWNTMIAAYTQNGHFDEARRVFGEMPRKNVVSWNTL 256
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC---VGVAEDLFQKMHDRDLT 208
+ G + EA+++FD+MP KDV +WN ++ Y NG V A ++F M +RDL
Sbjct: 257 LAAYSERGMLCEAKEMFDRMPQKDVISWNSLVTAYAQNGHILRVAAAREIFDTMRERDLI 316
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV--------KEAHSY 260
SW +I S + I F+ M E +SI + + + K H+
Sbjct: 317 SWNTMIAAYAQSGDGEEGIHLFRIMDLYGEAP-DSITLIAVLDACTAARSLERGKTIHAA 375
Query: 261 LEKYPYSNIASWTNVIVG----YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
+ ++ + V+ Y +G V A++ F+ + RDVT W +I N G
Sbjct: 376 IRAGTRLDLTTHLLVLTALVNMYGNLGCVELAMEAFQGIQRRDVTAWTAVIVAHARNGHG 435
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-- 374
L+ F + G PD F S+LT CS L GR A+ N T+ +
Sbjct: 436 GAALELFREFGLEGMQPDAVAFLSILTACSHAGLLYSGRDFFV-ALHGDYNVGVTLEHYR 494
Query: 375 AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFE 425
+I M R G ++ A +P D +SW +++ G A + + E
Sbjct: 495 CVIDMLGRLGQLELAEEVIRGMPFKADFVSWVTLLGACKTQGDAHRGQRVAE 546
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/502 (24%), Positives = 211/502 (42%), Gaps = 79/502 (15%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D V+W MI+ Y + G A+ +F +PER +++ ++D ++ +K +FD +
Sbjct: 1 DDVSWGAMIKAYTQAGHFVEAVRMFEIVPERSTVAMTSMVVAYAENDALEISKVMFDRIP 60
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKE 139
RD V+W +++S NG + E + +F MP + W ++ A + ++ + F
Sbjct: 61 ERDPVSWTALLSVNATNGHLVEVINIFDRMPKRSWRCWQTMLSAYSDHGDLENTKLTFAT 120
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
M R SW ++ + G + A++ FD+MP D +W ++ Y G + + F
Sbjct: 121 MPYRGSVSWNALLGAYAQTGHLESAKEFFDRMPQCDTVSWTIVSEAYAQRGHIQESRWFF 180
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
+ DRDL SW NSI+S R L+ +A
Sbjct: 181 DNVPDRDLVSW-------------------------------NSIMSAYARRALIDDARR 209
Query: 260 YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
E N+ SW +I Y + G A +VF M ++V WN ++ E + E
Sbjct: 210 VFEGILRPNVFSWNTMIAAYTQNGHFDEARRVFGEMPRKNVVSWNTLLAAYSERGMLCEA 269
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
+ F +M P D ++ N+++T
Sbjct: 270 KEMFDRM----PQKDVISW-----------------------------------NSLVTA 290
Query: 380 YARCGNI---QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
YA+ G+I +A F ++ D+ISWN++I A G E+ + LF M L PD
Sbjct: 291 YAQNGHILRVAAAREIFDTMRERDLISWNTMIAAYAQSGDGEEGIHLFRIMDLYGEAPDS 350
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMK--NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
IT + VL AC+ A +++G+ ++ + L T +V++ G G ++ AM
Sbjct: 351 ITLIAVLDACTAARSLERGKTIHAAIRAGTRLDLTTHLLVLTALVNMYGNLGCVELAMEA 410
Query: 495 LNEIRADGIEVSPTVWGALLGA 516
I+ + T W A++ A
Sbjct: 411 FQGIQRRDV----TAWTAVIVA 428
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 159/459 (34%), Positives = 259/459 (56%), Gaps = 12/459 (2%)
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL 213
G V +GRIV A + + N+++ Y GC+ A +F +M +D+ +W L
Sbjct: 101 GKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTAL 160
Query: 214 INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR-----NGLVK--EAHSYLEKYPY 266
I G + R A+ F QM + + +S L++ +GL + H++ KY Y
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGY 220
Query: 267 -SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
S++ + ++ Y G + +A F+ M T+ WN +I G GE L +
Sbjct: 221 QSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWK 280
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ P + T++SVL+ C+ + L+ G+ +HA IK + N ++ MYA+ G+
Sbjct: 281 MQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGS 340
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
I A F + D++SWN+++ G A HG ++ L+ FE+M +P++I+F+ VL+A
Sbjct: 341 IDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTA 400
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
CS++GL+D+G YYF+ MK KY ++P HY VDLLGR GL+D A + E+ IE
Sbjct: 401 CSHSGLLDEGLYYFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREM---PIEP 456
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
+ VWGALLGACR+H N+++G A ER EL+P++SG ++L+ +Y S GR D ++
Sbjct: 457 TAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRK 516
Query: 566 QMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
MKE+GVKK+P CSW++I + H+F++ D +HP+ +R
Sbjct: 517 MMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIR 555
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 50/331 (15%)
Query: 36 FLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC 95
FLDN + L N ++ + + A+ +FD M +D+VTW ++I+G+
Sbjct: 118 FLDNHLVL-----------QNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQ 166
Query: 96 NGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA--------RDVAS 147
N +AL +F M + + +L+ + ++ A V
Sbjct: 167 NNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYV 226
Query: 148 WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL 207
+ +V+ R G + A+ FD MP K +WN +I+G+ G A L KM ++
Sbjct: 227 GSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNF 286
Query: 208 TSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA---HSYLEKY 264
++F T++S++S G +++ H+++ K
Sbjct: 287 QP------------------THF---------TYSSVLSACASIGALEQGKWVHAHMIKS 319
Query: 265 PYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
IA N ++ Y + G + A +VF+ + DV WN M+ G ++ LG+E L F
Sbjct: 320 GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRF 379
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
QM G P+ +F VLT CS LD G
Sbjct: 380 EQMLRIGIEPNEISFLCVLTACSHSGLLDEG 410
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 116/250 (46%), Gaps = 21/250 (8%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA-RNQFTTVSNAMITMYARCGNIQSALL 391
PD ++ +L C+ L ++ GR +HA + + + N ++ MYA+CG + A
Sbjct: 85 PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F +P D+++W ++I G + + AL LF +M F+P+ T +L A
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHG 204
Query: 452 VDQG-RYYFDCMKNKYFLQPRSAHY--TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
+D G + + C+K Y +S+ Y + +VD+ R G +D A ++ DG+
Sbjct: 205 LDPGTQLHAFCLKYGY----QSSVYVGSALVDMYARCGHMDAA-----QLAFDGMPTKSE 255
Query: 509 V-WGALLGACRIHNNIKVGEIAGERVMELEPNN-SGVYLILTEMYLSC---GRREDAKRI 563
V W AL+ H GE A + +++ N + + + +C G E K +
Sbjct: 256 VSWNALISG---HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWV 312
Query: 564 FAQMKENGVK 573
A M ++G+K
Sbjct: 313 HAHMIKSGLK 322
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 144/364 (39%), Gaps = 91/364 (25%)
Query: 22 VTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM--- 78
V N+++ Y K G LD+A +F++MP +DM T+ +IAG Q++ + A +F M
Sbjct: 124 VLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRL 183
Query: 79 ------------------------------------EVRDVVTWNSMISGYVCNGLIDEA 102
V ++++ Y G +D A
Sbjct: 184 GFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAA 243
Query: 103 LRVFHGMPLKDVVSWNLVIGA-------------LVNCQRMDLAESYFK---------EM 140
F GMP K VSWN +I L QR + ++F +
Sbjct: 244 QLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASI 303
Query: 141 GARDVASWT---IMVNGL--------------VREGRIVEARKLFDKMPAKDVQAWNLMI 183
GA + W ++ +GL + G I +A+++FD++ DV +WN M+
Sbjct: 304 GALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTML 363
Query: 184 AGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMP----E 235
G +G D F++M + + S+ ++ +S +D + YF+ M E
Sbjct: 364 TGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVE 423
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE-----VGSAIK 290
+ + + +L R GL+ A ++ + P A+ ++G M + V +A +
Sbjct: 424 PDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAER 483
Query: 291 VFEL 294
FEL
Sbjct: 484 AFEL 487
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 175/570 (30%), Positives = 295/570 (51%), Gaps = 42/570 (7%)
Query: 42 CLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDE 101
C+ E++ N ++ ++ +Q A+ VFD + + +WN+MI+GYV + ++
Sbjct: 53 CIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAED 112
Query: 102 ALRVFHGMPLKDVV----SWNLVIGALVNCQRMDLAESYFKEMGA--------RDVASWT 149
A+R+F M + V ++ +++ A + A + KE+ A DV T
Sbjct: 113 AMRLFREMCHEGVQPNAGTYMIILKACASLS----ALKWGKEVHACIRHGGLESDVRVGT 168
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
++ + G I EAR++FD + D+ +W +MI Y +G A L +M
Sbjct: 169 ALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKP 228
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
++N+ + A+ + K++ ++ + + +R G
Sbjct: 229 NAITYVSILNACASEGALKWVKRVHR---HALDAGLELDVRVG----------------- 268
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
T ++ Y + G + A VF+ M RDV WNVMI E+ G E F+QM+
Sbjct: 269 ---TALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTE 325
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G PD F S+L C+ L+ ++IH A+ V A++ MY++ G+I A
Sbjct: 326 GCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDA 385
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
+ F + + +++SWN++I GLA HG + ALE+F RM KPD +TFV VLSACS+A
Sbjct: 386 RVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHA 445
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
GLVD+GR + M Y ++P +H C+VDLLGR G + EA ++ + D E +
Sbjct: 446 GLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEAT--- 502
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
WGALLG+CR + N+++GE+ + ++L+P N+ Y++L+ +Y G+ + + M+E
Sbjct: 503 WGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRE 562
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
G++KEPG SWI++++ H FL DSSHP+
Sbjct: 563 RGIRKEPGRSWIEVDNKIHDFLVADSSHPE 592
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 215/466 (46%), Gaps = 33/466 (7%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI 59
R+QEA+ +FD + ++ +WN MI GY ++ ++AM LF +M + + TY ++
Sbjct: 77 GRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIIL 136
Query: 60 AGLMQSDNVQGAKEV-----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
++ KEV G+E DV +++ Y G I+EA R+F + D+
Sbjct: 137 KACASLSALKWGKEVHACIRHGGLE-SDVRVGTALLRMYGKCGSINEARRIFDNLMNHDI 195
Query: 115 VSWNLVIGALVNCQRMDLAESY-----FKEMGARDVA-SWTIMVNGLVREGRIVEARKL- 167
+SW ++IGA Q + E+Y ++ G + A ++ ++N EG + +++
Sbjct: 196 ISWTVMIGAYA--QSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVH 253
Query: 168 ---FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
D DV+ ++ Y +G + A +F +M RD+ SW +I R
Sbjct: 254 RHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGH 313
Query: 225 AAISYFKQM-PETCEK---TWNSIISVLIRNGL---VKEAHSY-LEKYPYSNIASWTNVI 276
A F QM E C+ + SI++ G VK+ H + L+ ++ T ++
Sbjct: 314 EAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALV 373
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A VF+ M R+V WN MI GL ++ LG++ L+ F +M G PD
Sbjct: 374 HMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRV 433
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKI-ARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
TF +VL+ CS +D GR + ++ + N M+ + R G + A L +
Sbjct: 434 TFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDN 493
Query: 396 VPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+ + D +W +++ +G E EL + RL + T+V
Sbjct: 494 MAVDPDEATWGALLGSCRTYGNVELG-ELVAKERLKLDPKNAATYV 538
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 111/245 (45%), Gaps = 51/245 (20%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFT- 54
++ I +A+ +FD+M RD V+WNVMI + ++G A LF QM P+ MF
Sbjct: 277 KSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLS 336
Query: 55 ------------------YNTVIAGL--------------MQSDNVQGAKEVFDGMEVRD 82
+ + +GL +S ++ A+ VFD M+VR+
Sbjct: 337 ILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRN 396
Query: 83 VVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVNCQRMDLAESYF 137
VV+WN+MISG +GL +AL VF HG+ D V++ V+ A + +D S +
Sbjct: 397 VVSWNAMISGLAQHGLGQDALEVFRRMTAHGVK-PDRVTFVAVLSACSHAGLVDEGRSQY 455
Query: 138 KEMGA-----RDVASWTIMVNGLVREGRIVEARKLFDKMPA-KDVQAWNLMIAGYLDNGC 191
M DV+ MV+ L R GR++EA+ D M D W ++ G
Sbjct: 456 LAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGN 515
Query: 192 VGVAE 196
V + E
Sbjct: 516 VELGE 520
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 39/286 (13%)
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E + + + G D+ + VL C L +Q+H IK Q V N ++
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
+Y CG +Q A F ++ SWN++I G H +AE A+ LF M +P+
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM----N 493
T++ +L AC+ + G+ C+++ L+ T ++ + G+ G I+EA N
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRHG-GLESDVRVGTALLRMYGKCGSINEARRIFDN 189
Query: 494 LLN---------------------------EIRADGIEVSPTVWGALLGACRIHNNIK-- 524
L+N ++ +G + + + ++L AC +K
Sbjct: 190 LMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWV 249
Query: 525 --VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
V A + +EL+ V L +MY G +DA+ +F +MK
Sbjct: 250 KRVHRHALDAGLELDVR---VGTALVQMYAKSGSIDDARVVFDRMK 292
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/607 (30%), Positives = 310/607 (51%), Gaps = 49/607 (8%)
Query: 11 NLFDKMPQRDTVTWNVMIRGYFKNGFLDN-AMCLFNQMPERDMFTYNTVIAGLMQ----S 65
++F D + M++ Y + G + LF M NT +M S
Sbjct: 57 HIFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAGS 116
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
+++ V RD N ++ Y G I+ A ++F MP + V WN++I
Sbjct: 117 ESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYW 176
Query: 126 NCQRMDLAESYFKEMG----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
C + A + F MG +R+V +WT M+ G ++G + AR FDKMP + V +WN
Sbjct: 177 KCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNA 236
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDR-----DLTSWKQLINGLVN----------SRRIDAA 226
M++GY G LF M D T+W +I+ + R++D
Sbjct: 237 MLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDT 296
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEK---YPYSNIASWTNVIVGYFEMG 283
+ + P KT +++ + + G ++ AH E+ Y Y + W +I Y +G
Sbjct: 297 VGF---RPNYFVKT--ALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVG 351
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS-PDNATFTSVL 342
++ SA +F+ M RD WN MI G +N + +K F +M S S PD T SV
Sbjct: 352 DLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVF 411
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVS----NAMITMYARCGNIQSALLEFSSVPI 398
+ C L L LG A+ I + +S N++I+MY+RCG++Q A+L F +
Sbjct: 412 SACGHLGELGLGNW----AVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMAT 467
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
D++S+N++I G A HG+ +++EL +M+ +PD IT++ +L+ACS+AGL+ +G+
Sbjct: 468 RDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRL 527
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F+ +K P HY C++D+LGR G ++EAM L I++ +E ++G+LL A
Sbjct: 528 FESIKF-----PDVDHYACMIDMLGRAGRLEEAMKL---IQSMPMEPHAGIYGSLLNATS 579
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
IH +++GE+A ++ ++EP+NSG Y++L+ +Y S GR +D ++ M++ GVKK G
Sbjct: 580 IHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGL 639
Query: 579 SWIQIND 585
SW++ N
Sbjct: 640 SWLEHNS 646
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 207/443 (46%), Gaps = 78/443 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAG 61
I+ A+ LFD+MP R WNVMI GY+K G + A LF+ M + R++ T+ T+I G
Sbjct: 150 IEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITG 209
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM--P---LKDVVS 116
+ N++ A+ FD M R VV+WN+M+SGY G +E +R+F+ M P D +
Sbjct: 210 HAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETT 269
Query: 117 WNLVIGAL------------------------------------VNCQRMDLAESYFKEM 140
W VI + C ++ A F+++
Sbjct: 270 WVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQL 329
Query: 141 GA---RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
G R W M++ R G + AR LFDKMP +D +WN MIAGY NG A
Sbjct: 330 GVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIK 389
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
LF++M + + ++ + + S + E W +S+L KE
Sbjct: 390 LFEEMISSEDSKPDEVT--------MVSVFSACGHLGELGLGNW--AVSIL------KEN 433
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
H + +I+ + ++I Y G + A+ +F+ M TRD+ +N +I G E+ G
Sbjct: 434 HIQI------SISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGM 487
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--A 375
E ++ ++MKE G PD T+ ++LT CS L G+++ ++IK F V +
Sbjct: 488 ESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLF-ESIK-----FPDVDHYAC 541
Query: 376 MITMYARCGNIQSALLEFSSVPI 398
MI M R G ++ A+ S+P+
Sbjct: 542 MIDMLGRAGRLEEAMKLIQSMPM 564
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/641 (29%), Positives = 329/641 (51%), Gaps = 29/641 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ + E +F+ MP+++ VTW ++ G M LF +M ++ A
Sbjct: 146 MKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFA 205
Query: 61 GLMQSDNVQGAKEVFDGMEVRDV--------VTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++ + QGA ++ + + V NS+++ Y GL+++A VF+ M +
Sbjct: 206 SVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR 265
Query: 113 DVVSWNLVIGAL----VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
D+VSWN ++ L + + L MG +++ ++ ++ AR+L
Sbjct: 266 DMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLH 325
Query: 169 DKMPAKDVQ-AWNLMIA---GYLDNGCVGVAEDLFQ-KMHDRDLTSWKQLINGLVNSRRI 223
+ N+M A Y G + A ++F R++ SW +I+G + + I
Sbjct: 326 SCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDI 385
Query: 224 DAAISYFKQMPE----TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS-WTNVIVG 278
A+ F +M E E T+++++ + + L + H+ + K Y +I S T ++
Sbjct: 386 PLAVVLFSRMREDRVMPNEFTYSAMLKASL-SILPPQIHAQVIKTNYQHIPSVGTALLAS 444
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G A+ +F+++ +DV W+ M+ + E F +M G P+ T
Sbjct: 445 YSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTI 504
Query: 339 TSVLTICSDLPT--LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
+SV+ C+ P+ +D GRQ HA +IK + VS+A+++MY+R GNI SA + F
Sbjct: 505 SSVIDACA-CPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQ 563
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
D++SWNS+I G A HGY+ KA+E F +M + + D +TF+ V+ C++ GLV +G+
Sbjct: 564 TDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQ 623
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
YFD M + + P HY C+VDL R G +DE M+L IR VW LLGA
Sbjct: 624 QYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSL---IRDMPFPAGAMVWRTLLGA 680
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
CR+H N+++G+ + ++++ LEP++S Y++L+ +Y + G+ ++ + M VKKE
Sbjct: 681 CRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEA 740
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
GCSWIQI + H F++ D SHP ++ L ++ T ++++
Sbjct: 741 GCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQD 781
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 127/516 (24%), Positives = 236/516 (45%), Gaps = 43/516 (8%)
Query: 9 AQNLFDKMPQRDT-VTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS-- 65
A+ D++P+RD V N ++ Y + G + + F+ + + ++ ++++
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 66 ---DNVQGAKE----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
D V G + V G + +V S++ Y+ G + E + VF GMP K+VV+W
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNGLVREGRIVEARKLFDKMPAK 174
++ + Q + F M A + ++ +++ + +G A L ++ A+
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQG----ALDLGQRVHAQ 226
Query: 175 DVQ--------AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
V+ N ++ Y G V A+ +F M RD+ SW L+ GL + A
Sbjct: 227 SVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEA 286
Query: 227 ISYFKQ----MPETCEKTWNSIISV---LIRNGLVKEAHSYLEKYPYSNIAS-WTNVIVG 278
+ F + M + + T+ ++I + L + L ++ HS + K+ + + T +
Sbjct: 287 LQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADA 346
Query: 279 YFEMGEVGSAIKVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + GE+ A+ +F + T +R+V W +I G +N + F +M+E P+ T
Sbjct: 347 YSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFT 406
Query: 338 FTSVLTIC-SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
++++L S LP QIHAQ IK +V A++ Y++ G+ + AL F +
Sbjct: 407 YSAMLKASLSILPP-----QIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMI 461
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL-VDQG 455
D+++W++++ A G E A LF +M + KP++ T V+ AC+ VDQG
Sbjct: 462 EQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQG 521
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
R F + KY + +V + R G ID A
Sbjct: 522 R-QFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA 556
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 133/268 (49%), Gaps = 6/268 (2%)
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+++ T+++ Y + G V I+VFE M ++V W ++ G + E + F +M+
Sbjct: 135 VSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRA 194
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
G P+ TF SVL+ + LDLG+++HAQ++K V N+++ MYA+CG ++
Sbjct: 195 EGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVED 254
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F+ + D++SWN+++ GL + +AL+LF R T K T+ V+ C+
Sbjct: 255 AKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCAN 314
Query: 449 AGLVDQGRYYFDC-MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
+ R C +K+ + L T + D + G + +A+N+ + VS
Sbjct: 315 LKQLALARQLHSCVLKHGFHLTGNV--MTALADAYSKCGELADALNIFSMTTGSRNVVS- 371
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVME 535
W A++ C + +I + + R+ E
Sbjct: 372 --WTAIISGCIQNGDIPLAVVLFSRMRE 397
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 192/617 (31%), Positives = 316/617 (51%), Gaps = 58/617 (9%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR---DVVTWNSMISGYVCNGLIDEALRV 105
E ++F N ++A + +++ A +FD + R DV++WNS++S +V + AL +
Sbjct: 42 ESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDL 101
Query: 106 FHGMPL----------KDVVSWNLVIGALVNC-------QRMDLAESYFKEMGARDVASW 148
F M L D++S ++ L C Q ++ + + DV
Sbjct: 102 FSKMTLIVHEKPTNERSDIIS---IVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVG 158
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR--- 205
+++ + G + A K+F+ M KDV +WN M+AGY +G A +LF+ M
Sbjct: 159 NALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIP 218
Query: 206 -DLTSWKQLINGLVNSRRIDAAISYFKQMPETCE-KTWNSIISVLIRNGLVKEAHSYLEK 263
D+ +W +I G A++ F+QM + +IISVL + +E
Sbjct: 219 LDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEI 278
Query: 264 YPYS-----------------NIASWTNVIVGYFEMGEVGSAIKVFE--LMTTRDVTVWN 304
+ YS ++ + +I Y + +A +F+ + R+V W
Sbjct: 279 HAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWT 338
Query: 305 VMIFGLGENDLGEEGLKFFVQM--KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
VMI G + + LK FV+M + G +P+ T + +L C+ L + +G+QIHA +
Sbjct: 339 VMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVL 398
Query: 363 KIARNQFTT----VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
+ +Q+ + V+N +I MY++CG++ +A F S+ ISW S++ G HG
Sbjct: 399 R--HHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGS 456
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
+AL++F++MR F PDDITF+ VL ACS+ G+VDQG YFD M Y L PR+ HY
Sbjct: 457 EALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYA 516
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
+DLL RFG +D+A + ++ +E + VW ALL ACR+H+N+++ E A +++E+
Sbjct: 517 IDLLARFGRLDKAWKTVKDMP---MEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNA 573
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
N G Y +++ +Y + GR +D RI MK++G+KK PGCSW+Q G F GD SHP
Sbjct: 574 ENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHP 633
Query: 599 KFHRLRYLLNLLHTEIE 615
++ LL L I+
Sbjct: 634 LSPQIYALLESLIDRIK 650
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 162/355 (45%), Gaps = 35/355 (9%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D N +I Y K G ++NA+ +FN M +D+ ++N ++AG QS N + A E+F M
Sbjct: 154 DVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMR 213
Query: 80 VR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAES 135
D+VTW ++I+GY G EAL VF M + G+L NC + S
Sbjct: 214 KENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQM---------IFSGSLPNCVTIISVLS 264
Query: 136 YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
+GA S + ++ + ++ F +D+ +N +I Y A
Sbjct: 265 ACASLGA---FSQGMEIHAYSLKNCLLTLDNDFGG-EDEDLMVYNALIDMYSKCRSFKAA 320
Query: 196 EDLFQ--KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM---PETCEKTWNSIISVL-- 248
+F + +R++ +W +I G + A+ F +M P +I +L
Sbjct: 321 RSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMA 380
Query: 249 ------IRNGLVKEAHSY-LEKYPYSNIASW-TNVIVG-YFEMGEVGSAIKVFELMTTRD 299
IR G K+ H+Y L + Y + A + N ++ Y + G+V +A VF+ M+ +
Sbjct: 381 CAHLAAIRIG--KQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKS 438
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
W M+ G G + G E L F +M+++G PD+ TF VL CS +D G
Sbjct: 439 AISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 493
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 118/270 (43%), Gaps = 25/270 (9%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMYAR 382
M +G D+ T VL C +LP+ G H I N F + + NA++ MY+R
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGL---ICCNGFESNVFICNALVAMYSR 57
Query: 383 CGNIQSALLEFSSVP---IHDIISWNSIICGLAYHGYAEKALELFERMRL------TDFK 433
CG+++ A + F + I D+ISWNSI+ A AL+LF +M L T+ +
Sbjct: 58 CGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNER 117
Query: 434 PDDITFVGVLSACSYAGLVDQGR-YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
D I+ V +L AC V Q + + + ++N FL + ++D + GL++ A+
Sbjct: 118 SDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGN--ALIDAYAKCGLMENAV 175
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMY 551
+ N + + W A++ N K E+ E P + + + Y
Sbjct: 176 KVFNMMEFKDV----VSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGY 231
Query: 552 LSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
G +A +F QM +G P C I
Sbjct: 232 SQRGCSHEALNVFRQMIFSG--SLPNCVTI 259
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 16/181 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+ A+++FD M Q+ ++W M+ GY +G A+ +F++M + D T+ V+
Sbjct: 424 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 483
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN-----GLIDEALRVFHGMPLKDV-V 115
V FD M +T + Y + G +D+A + MP++ V
Sbjct: 484 CSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAV 543
Query: 116 SWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGR---IVEARKLFD 169
W ++ A ++LAE EM A + S+T++ N GR + R L
Sbjct: 544 VWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMK 603
Query: 170 K 170
K
Sbjct: 604 K 604
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 262/477 (54%), Gaps = 34/477 (7%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G + E R++FDK+ + V WNL++ GY G + LF++M + +
Sbjct: 150 GDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRE-------------L 196
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
RR+++A F ++ + +WNS+IS + NGL ++ E+ I + +V
Sbjct: 197 GIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVS 256
Query: 279 ------------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
Y + G + SAI+VFE M R V W MI G L + ++ F +M
Sbjct: 257 VELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEM 316
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMYARC 383
++ P++ T +L C+ L L+ G++IH I RN F+ V+NA++ MY +C
Sbjct: 317 EKEDLFPNSITMACILPACASLAALERGQEIHGH---ILRNGFSLDRHVANALVDMYLKC 373
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G + A L F +P D++SW +I G HGY +A+ F MR + +PD+++F+ +L
Sbjct: 374 GALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISIL 433
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
ACS++GL+D+G +F+ M+N ++P+S HY C+VDLL R G + +A I+ I
Sbjct: 434 YACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKF---IKMMPI 490
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI 563
E T+WGALL CRI++++K+ E E V ELEP N+G Y++L +Y + E+ K++
Sbjct: 491 EPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKL 550
Query: 564 FAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILF 620
++ G++K PGCSWI+I H+F++GDSSHP +++ LL T ++ E F
Sbjct: 551 RERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHF 607
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 185/442 (41%), Gaps = 93/442 (21%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++E + +FDK+ WN+++ GY K G ++ LF +M E +
Sbjct: 152 LREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRE-------------LGI 198
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVI 121
V+ A+++FD + RDV++WNSMISGYV NGL ++ L +F M L D+ + V
Sbjct: 199 RRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVE 258
Query: 122 GALVNC--------QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
L NC ++ A F+ MG R V SWT M+ G REG + +LF +M
Sbjct: 259 LTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEK 318
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
+D+ ++ +A L A + Q++H L NG R +
Sbjct: 319 EDLFPNSITMACILPACASLAALERGQEIHGHILR------NGFSLDRHVA--------- 363
Query: 234 PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE 293
N+++ + ++ G + A + P ++ SWT +I GY
Sbjct: 364 --------NALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGY-------------- 401
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
G + G E + F +M+ SG PD +F S+L CS LD
Sbjct: 402 -----------------GMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDE 444
Query: 354 GRQIHAQAIKIARNQFTTVSNA-----MITMYARCGNIQSALLEFSSVPIH-DIISWNSI 407
G + RN + ++ + AR GN+ A +PI D W ++
Sbjct: 445 GWGF----FNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGAL 500
Query: 408 ICGLA-YH--GYAEKALE-LFE 425
+CG YH AEK E +FE
Sbjct: 501 LCGCRIYHDVKLAEKVAEHVFE 522
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTY----- 55
R++ A+ LFD++ RD ++WN MI GY NG + + LF QM D+ T
Sbjct: 200 RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVEL 259
Query: 56 ---NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
N ++ +S N+ A +VF+ M R VV+W SMI+GY GL D ++R+FH M +
Sbjct: 260 TLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKE 319
Query: 113 DVVSWNLVIGALV-NCQRMDLAESYFKEMGA---------RDVASWTIMVNGLVREGRIV 162
D+ ++ + ++ C + E + G R VA+ +V+ ++ G +
Sbjct: 320 DLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVAN--ALVDMYLKCGALG 377
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLV 218
AR LFD +P KD+ +W +MIAGY +G A F +M + D S+ ++
Sbjct: 378 LARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS 437
Query: 219 NSRRIDAAISYFKQMPETC-----EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS-W 272
+S +D +F M C + + I+ +L R G + +A+ +++ P A+ W
Sbjct: 438 HSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIW 497
Query: 273 TNVIVGYFEMGEVGSAIKVFE 293
++ G +V A KV E
Sbjct: 498 GALLCGCRIYHDVKLAEKVAE 518
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 126/297 (42%), Gaps = 52/297 (17%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG-- 330
+ ++ Y G++ ++F+ + V +WN+++ G + E L F +M+E G
Sbjct: 140 SKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIR 199
Query: 331 ------------PSPDNATFTSVLT--ICSDLPT--LDLGRQIHAQAIKIARNQFT---- 370
D ++ S+++ + + L LDL Q+ I
Sbjct: 200 RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVEL 259
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
T++N ++ MY++ GN+ SA+ F ++ ++SW S+I G A G ++ ++ LF M
Sbjct: 260 TLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKE 319
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGR-YYFDCMKNKYFLQPRSAH--------------- 474
D P+ IT +L AC+ +++G+ + ++N + L A+
Sbjct: 320 DLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLA 379
Query: 475 --------------YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+T ++ G G EA+ NE+R GIE + ++L AC
Sbjct: 380 RLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYAC 436
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 154/386 (39%), Gaps = 75/386 (19%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA-- 336
Y +G+++ E + + +T +N+ I E LG L+ +++ P PD
Sbjct: 48 YHSCATIGTSVLPSETIDCK-ITDYNIEICRFCE--LG--NLRRAMELINQSPKPDLELR 102
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN----------- 385
T+ SVL +C+DL ++ GR+IH+ + + ++ MY CG+
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 386 --------------------------------------IQSALLEFSSVPIHDIISWNSI 407
++SA F + D+ISWNS+
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV---LSAC-----SYAGLVDQGRYYF 459
I G +G +EK L+LFE+M L D T V V L+ C S +G ++ F
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVF 282
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
+ M + + +T ++ R GL D ++ L +E+ + + + +L AC
Sbjct: 283 ETMGERSVVS-----WTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACAS 337
Query: 520 HNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
++ G EI G + + V L +MYL CG A+ +F + E +
Sbjct: 338 LAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDL-----V 392
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLR 604
SW + G + G + F+ +R
Sbjct: 393 SWTVMIAGYGMHGYGSEAIAAFNEMR 418
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 296/580 (51%), Gaps = 47/580 (8%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D F ++ ++ V+ A FD M RDV WN+M+SG N EA+ +F M
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162
Query: 111 LKDV------VSWNLVIGALVNCQRMDLA-ESYFKEMGARD-VASWTIMVNGLVREGRIV 162
++ V VS L + L+ + + LA Y + G D + M++ + G +
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLE 222
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
E RK+FD M ++D+ WN +I+G+ G V A ++F M D ++ + L
Sbjct: 223 EVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLA---- 278
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
S Q + C S+ ++R G + +I + ++ Y ++
Sbjct: 279 -----SAIAQCGDICGG--RSVHCYMVRRG-----------WDVGDIIAGNAIVDMYAKL 320
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSV 341
++ +A ++F+ M RD WN +I G +N L E + + M K G P TF SV
Sbjct: 321 SKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSV 380
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L S L L G ++HA +IK N V +I +YA+CG + A+L F P
Sbjct: 381 LPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRST 440
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
WN++I G+ HG+ KAL LF +M+ PD +TFV +L+ACS+AGLVDQGR +F+
Sbjct: 441 GPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNM 500
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
M+ Y ++P + HY C+VD+ GR G +D+A + IR I+ +WGALLGACRIH
Sbjct: 501 MQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDF---IRNMPIKPDSAIWGALLGACRIHG 557
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
N+++G++A + + EL+P N G Y++++ MY G+ + + + ++ ++K PG S I
Sbjct: 558 NVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI 617
Query: 582 QINDGGHVFLSGDSS--HPKFHRLRYLLNLLHTEIEREIL 619
++ +VF SG+ HP+ H EI+RE+L
Sbjct: 618 EVKRSVNVFYSGNQMNIHPQ-----------HEEIQRELL 646
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 133/561 (23%), Positives = 228/561 (40%), Gaps = 117/561 (20%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------ 48
+R R+++A FD+M RD WN M+ G +N A+ LF +M
Sbjct: 115 LRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVS 174
Query: 49 ---------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
+ ++F N +I + ++ ++VFDGM R
Sbjct: 175 SVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSR 234
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYF 137
D+VTWNS+ISG+ G + A+ +F GM DV++ + A+ C + S
Sbjct: 235 DLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVH 294
Query: 138 KEMGAR-----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
M R D+ + +V+ + +I A+++FD MP +D +WN +I GY+ NG
Sbjct: 295 CYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLA 354
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A ++ M + K + V+ + A S+ + + + ++ I+ G
Sbjct: 355 SEAIHVYDHMQKHE--GLKPIQGTFVS---VLPAYSHLGALQQG-----TRMHALSIKTG 404
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
L L+ Y T VI Y + G++ A+ +FE R WN +I G+G
Sbjct: 405 L------NLDVY------VGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGV 452
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH-----AQAIKIARN 367
+ G + L F QM++ G SPD+ TF S+L CS +D GR A IK
Sbjct: 453 HGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAK 512
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
+ M+ M+ R G + A F+ +
Sbjct: 513 HYA----CMVDMFGRAGQLDDA----------------------------------FDFI 534
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS-AHYTCVVDLLGRFG 486
R KPD + +L AC G V+ G+ +N + L P++ +Y + ++ + G
Sbjct: 535 RNMPIKPDSAIWGALLGACRIHGNVEMGKV---ASQNLFELDPKNVGYYVLMSNMYAKVG 591
Query: 487 LIDEAMNLLNEIRADGIEVSP 507
D + + +R ++ +P
Sbjct: 592 KWDGVDEVRSLVRRQNLQKTP 612
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 187/641 (29%), Positives = 325/641 (50%), Gaps = 31/641 (4%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
R + A+ +F++M RD+V+WN +I GY NGF ++A+ ++++ D FT ++
Sbjct: 168 RFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSS 227
Query: 58 VI---AGLMQSDNVQGAKEVFDGMEVR-DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
V+ LM V + + + DV+ N ++S Y + EA RVF M +KD
Sbjct: 228 VLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKD 287
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM---GARDVASWTIMV-----NGLVREGRIVEAR 165
V+WN +I R + + F +M D+ S T + +G ++ G+ V +
Sbjct: 288 SVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQVGKFVH-K 346
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
L D A N++I Y G + A+++F +D +W LING S
Sbjct: 347 YLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKE 406
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW---TNVIVG---- 278
+ FK M E+ +S+ VL+ + + A + + ++ + +I+G
Sbjct: 407 GLESFKMMK--MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLL 464
Query: 279 --YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + GE+ +KVF M+ D+ WN +I D G + +M+ G PD A
Sbjct: 465 DVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEA 524
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T +L +CS L G++IH K + NA+I MY++CG++++ + F +
Sbjct: 525 TVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYM 584
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
D+++W ++I +G +KAL+ F+ M L+ PD + F+ + ACS++G+V +G
Sbjct: 585 KEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGL 644
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
+FD MK Y L+PR HY CVVDLL R GL+ +A I + ++ ++WGALL A
Sbjct: 645 RFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEF---ILSMPMKPDASLWGALLSA 701
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
CR N + + ++++EL +++G Y++++ +Y + G+ + K + MK G+KKEP
Sbjct: 702 CRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEP 761
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
G SWI+I +VF +GD S ++ +++ LL L + +E
Sbjct: 762 GSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKE 802
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 99/183 (54%), Gaps = 1/183 (0%)
Query: 274 NVIVGYFEMGEVGSAIKVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+I Y ++ + S++ VF ++ T +V +WN +I L N L + L ++ +M+E
Sbjct: 59 KLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQ 118
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD TF SV+ C+ + L+LG +H A+++ + NA+I MY+R ++ +A
Sbjct: 119 PDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYV 178
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F + D +SWNS+I G +G+ E AL+++ + R+T PD T VL AC V
Sbjct: 179 FEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAV 238
Query: 453 DQG 455
+G
Sbjct: 239 KEG 241
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 11/257 (4%)
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPE--------TCEKTWNSIISVL-IRNGLVKEAHSY 260
W +I L ++ A+ Y+ +M E T NS +L + G + H+
Sbjct: 89 WNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHA- 147
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+E S++ +I Y ++ +A VFE M+ RD WN +I G N E+ L
Sbjct: 148 MEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDAL 207
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
+ + + +G PD T +SVL C L + G +H KI + N +++MY
Sbjct: 208 DMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMY 267
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+ ++ A FS + + D ++WN++ICG A G E +++LF M + F PD ++
Sbjct: 268 FKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSIT 326
Query: 441 GVLSACSYAGLVDQGRY 457
+ AC +G + G++
Sbjct: 327 STIRACGQSGDLQVGKF 343
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 184/604 (30%), Positives = 313/604 (51%), Gaps = 46/604 (7%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDN 67
AQ L K+ + ++ ++I + LD A+ +FN +P+ + N + L +S+
Sbjct: 43 HAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEE 102
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW--NLVIGALV 125
+ V++ M + + A+ F PL +S +LV G +
Sbjct: 103 PEKTLLVYERMRTQGL------------------AVDRFSFPPLLKALSRVKSLVEGLEI 144
Query: 126 N--CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
+ ++ F + G +V GRI EAR +FDKM +DV W++MI
Sbjct: 145 HGLAAKLGFDSDPFVQTG---------LVRMYAACGRIAEARLMFDKMFHRDVVTWSIMI 195
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT--- 240
GY +G A LF++M + ++ + +++ ++++ +SY K + + +
Sbjct: 196 DGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIV 255
Query: 241 -----WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
++++++ G + A + EK N+ + T ++ GY ++G++ +A VF M
Sbjct: 256 VDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQM 315
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+D+ W+ MI G E+D +E L F +M+ G PD T SV+T C+ L LD +
Sbjct: 316 VKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAK 375
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
IH K ++NA+I MYA+CG+++ A F +P ++ISW +I A HG
Sbjct: 376 WIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHG 435
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
A AL F +M + +P+ ITFVGVL ACS+AGLV++GR F M N++ + P+ HY
Sbjct: 436 DAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHY 495
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV--WGALLGACRIHNNIKVGEIAGERV 533
C+VDL GR L+ EA+ L+ + + ++P V WG+L+ ACR+H I++GE A +R+
Sbjct: 496 GCMVDLFGRANLLREALELV-----EAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRL 550
Query: 534 MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSG 593
+EL+P++ G ++ L+ +Y R ED ++ MK G+ KE GCS ++N+ H FL
Sbjct: 551 LELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVA 610
Query: 594 DSSH 597
D SH
Sbjct: 611 DRSH 614
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 191/444 (43%), Gaps = 72/444 (16%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIA 60
RI EA+ +FDKM RD VTW++MI GY ++G ++A+ LF +M E D +TV++
Sbjct: 172 RIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLS 231
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVT----WNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
++ N+ K + D + ++V +++++ Y G +D AL +F M K++V+
Sbjct: 232 ACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVA 291
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
++ +++ A S F +M +D+ W+ M++G EA LF++M + +
Sbjct: 292 STAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGI 351
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLI---NGLVNSRRIDAAISYFKQM 233
+ + + + C + D W L NG + I+
Sbjct: 352 KPDQVTMLSVI-TACAHLGA--------LDQAKWIHLFVDKNGFGGALPIN--------- 393
Query: 234 PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE 293
N++I + + G ++ A +K P N+ SWT +I + G+ GSA
Sbjct: 394 --------NALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSA----- 440
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
L+FF QM++ P+ TF VL CS ++
Sbjct: 441 --------------------------LRFFHQMEDENIEPNGITFVGVLYACSHAGLVEE 474
Query: 354 GRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGL 411
GR+I I V M+ ++ R ++ AL ++P+ ++I W S++
Sbjct: 475 GRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAAC 534
Query: 412 AYHGYAEKALELFERMRLTDFKPD 435
HG E L F RL + PD
Sbjct: 535 RVHGEIE--LGEFAAKRLLELDPD 556
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 182/427 (42%), Gaps = 58/427 (13%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A NLF+KM ++ V M+ GY K G ++NA +FNQM ++D+ ++ +I+G +SD+
Sbjct: 277 ALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSP 336
Query: 69 QGAKEVFDGMEV----RDVVTWNSMISGYVCNGLIDEA--LRVF-------HGMPLKDVV 115
Q A +F+ M+ D VT S+I+ G +D+A + +F +P+
Sbjct: 337 QEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPIN--- 393
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
N +I C ++ A F +M ++V SWT M++ G A + F +M ++
Sbjct: 394 --NALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDEN 451
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
++ + G L+ H + +++ ++N I ++ M
Sbjct: 452 IEPNGITFVGV-----------LYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCM-- 498
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIV-----GYFEMGEVGSAI 289
+ + R L++EA +E P + N+ W +++ G E+GE +A
Sbjct: 499 ---------VDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEF-AAK 548
Query: 290 KVFELMTTRD---VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
++ EL D V + N+ D+G+ MK G S + S + +
Sbjct: 549 RLLELDPDHDGAHVFLSNIYAKARRWEDVGQ----VRKLMKHKGISKERG--CSRFELNN 602
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
++ + + H A +I + VS + Y+ N S L++ +++ W+S
Sbjct: 603 EIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYS--PNTCSILVDLEEEEKKEVVLWHS 660
Query: 407 IICGLAY 413
L Y
Sbjct: 661 EKLALCY 667
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 192/638 (30%), Positives = 326/638 (51%), Gaps = 37/638 (5%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ---- 64
A++ FD +P+RD V WNVM+ G K G +D A+ LF M +A +
Sbjct: 195 ARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCAT 254
Query: 65 -SDNVQGAK----EVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+D + GA+ V G+E +V N++++ Y +D+A R+F MP D+V+WN
Sbjct: 255 DADLLSGAQLHSLAVKCGLE-PEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNG 313
Query: 120 VIGALVNCQRMDLAESYFKEM---GARDVASWTIM--------VNGLVREGRIVEARKLF 168
+I V A F +M GAR S T++ +NGL ++G+ V +
Sbjct: 314 MISGCVQNGLFVEAFGLFYDMQRSGARP-DSITLVSLLPALTDLNGL-KQGKEVHGY-IV 370
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
DV + ++ Y V +A++L+ D+ +I+G V + + A+
Sbjct: 371 RNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQ 430
Query: 229 YFKQMPETCEKTWNSIISVLIRNG--------LVKEAHSYLEKYPYSNIASWTNVIVG-Y 279
F+ + E C K N++ + G L ++ H Y+ + Y + ++ Y
Sbjct: 431 MFRYLLEQCIKP-NAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMY 489
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G + + +F M+ +D WN MI +N +E L F QM G +N T +
Sbjct: 490 AKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITIS 549
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
+ L+ C+ LP + G++IH IK +A+I MYA+CGN++ AL F +P
Sbjct: 550 AALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDK 609
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
+ +SWNSII HG ++++ L M+ +KPD +TF+ ++SAC++AGLV++G F
Sbjct: 610 NEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLF 669
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
CM KY + PR H+ C+VDL R G +D+A+ + ++ + +WGALL ACR+
Sbjct: 670 QCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMP---FKPDAGIWGALLHACRV 726
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
H N+++ +IA + + +L+P NSG Y++++ + GR + ++ MK+N + K PG S
Sbjct: 727 HRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYS 786
Query: 580 WIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
W+ +N+ H+F++ D SHP+ + L L E+ E
Sbjct: 787 WVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREE 824
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 147/603 (24%), Positives = 264/603 (43%), Gaps = 49/603 (8%)
Query: 5 RIQEAQNLFDKMPQR---DTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTY 55
R ++A +F +P+ ++ WN +IRG+ G A+ + +M P D T
Sbjct: 85 RFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTL 144
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
V+ + + V DV ++++ Y GL+ A F G+P
Sbjct: 145 PYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPE 204
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKL 167
+D V WN+++ + +D A F+ M A + A+ ++ + ++ +L
Sbjct: 205 RDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQL 264
Query: 168 FDKMPAK-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ K +V N ++A Y C+ A LF+ M DL +W +I+G V +
Sbjct: 265 -HSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGL 323
Query: 223 IDAAISYFKQMPETCEK----TWNSIISVLIR-NGLV--KEAHSYLEKYPYSNIASWTNV 275
A F M + + T S++ L NGL KE H Y+ + + +
Sbjct: 324 FVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSA 383
Query: 276 IVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+V YF+ +V A +++ DV + + MI G N + EE L+ F + E P+
Sbjct: 384 LVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPN 443
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
T SVL C+ + L LG+QIH ++ A + V +A++ MYA+CG + + F
Sbjct: 444 AVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFL 503
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS-----YA 449
+ D ++WNS+I + +G ++AL+LF +M + K ++IT LSAC+ Y
Sbjct: 504 KMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYY 563
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
G G +K F + + ++D+ + G ++ A+ + E D EVS
Sbjct: 564 GKEIHGVTIKGPIKADIFAE------SALIDMYAKCGNLELALRVF-EFMPDKNEVS--- 613
Query: 510 WGALLGACRIHNNIK--VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
W +++ A H +K V + G + +P++ +L L G E+ ++F M
Sbjct: 614 WNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHV-TFLALISACAHAGLVEEGVQLFQCM 672
Query: 568 KEN 570
+
Sbjct: 673 TKK 675
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 124/537 (23%), Positives = 226/537 (42%), Gaps = 58/537 (10%)
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVS---WNLVIGALVNCQRMDLAESYFKEMGARDV 145
++ YV +A+ VF +P S WN +I + LA ++ +M +
Sbjct: 76 LLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPA 135
Query: 146 ASW-----------TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
A + G + GR+V R A DV + ++ Y D G +G
Sbjct: 136 APSPDAHTLPYVVKSCAALGAMSLGRLVH-RTARAIGLANDVYVGSALVKMYADAGLLGN 194
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKTWNSI---ISVLIR 250
A D F + +RD W +++G + + +D A+ F+ M + CE + ++ +SV
Sbjct: 195 ARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCAT 254
Query: 251 NGLV---KEAHSYLEKYPYSNIASWTNVIVGYFEMGE-VGSAIKVFELMTTRDVTVWNVM 306
+ + + HS K + N ++ + + + A ++FELM D+ WN M
Sbjct: 255 DADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGM 314
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
I G +N L E F M+ SG PD+ T S+L +DL L G+++H ++
Sbjct: 315 ISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCV 374
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
N + +A++ +Y +C +++ A + + D++ +++I G +G +E+AL++F
Sbjct: 375 NMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRY 434
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGR-----------------------YYFDC-- 461
+ KP+ +T VL C+ + G+ Y C
Sbjct: 435 LLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGR 494
Query: 462 --MKNKYFL---QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
+ + FL Q + ++ + G EA++L ++ +GI+ + A L A
Sbjct: 495 LDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSA 554
Query: 517 CRIHNNIKVG-EIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQMKEN 570
C I G EI G + P + ++ L +MY CG E A R+F M +
Sbjct: 555 CASLPAIYYGKEIHGVTIK--GPIKADIFAESALIDMYAKCGNLELALRVFEFMPDK 609
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 16/260 (6%)
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELM---TTRDVTVWNVMIFGLGENDLGEEGLKF 322
++++A T ++ Y A+ VF + WN +I G + F
Sbjct: 67 HNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLF 126
Query: 323 FVQM--KESGPSPDNATFTSVLTICSDLPTLDLGRQIH--AQAIKIARNQFTTVSNAMIT 378
+V+M + PSPD T V+ C+ L + LGR +H A+AI +A + + V +A++
Sbjct: 127 YVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVY--VGSALVK 184
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MYA G + +A F +P D + WN ++ G G + A+ LF MR + +P+ T
Sbjct: 185 MYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFAT 244
Query: 439 FVGVLSACSY-AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
LS C+ A L+ + + + K L+P A ++ + + +D+A L
Sbjct: 245 LACFLSVCATDADLLSGAQLH--SLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFEL 302
Query: 498 IRADGIEVSPTVWGALLGAC 517
+ D + W ++ C
Sbjct: 303 MPQDDL----VTWNGMISGC 318
>gi|356518777|ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 737
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/505 (32%), Positives = 273/505 (54%), Gaps = 19/505 (3%)
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARK 166
+ V ++ +I + +R+ LA + + + + NGL+ + G A K
Sbjct: 7 ISSVEKYSFLISKCITARRVKLANAVHGHLIKTALFFDAFLANGLIDAYSKCGCEESAHK 66
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
F +P K ++WN +I+ Y G A +LF KM R++ S+ LI+G + R
Sbjct: 67 TFGDLPNKTTRSWNTLISFYSKTGFFDEAHNLFDKMPQRNVVSYNSLISGNLQWLRQVHG 126
Query: 227 ISYFKQMPETCEKTWN-----SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFE 281
++ M WN ++I + G + S P N+ SWT+++V Y
Sbjct: 127 VAVIVGM------EWNVILNNALIDAYGKCGEPNLSFSVFCYMPERNVVSWTSMVVAYTR 180
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
+ A +VF+ M ++ W ++ G N +E F QM E G P TF SV
Sbjct: 181 ACRLDEACRVFKDMPVKNTVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAPTFVSV 240
Query: 342 LTICSDLPTLDLGRQIHAQAIKIAR--NQFTT-VSNAMITMYARCGNIQSALLEFSSVPI 398
+ C+ + G+Q+H Q I+ + N F V NA+I MYA+CG+++SA F P+
Sbjct: 241 IDACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKSAENLFEMAPM 300
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
D+++WN++I G A +G+ E++L +F RM +P+ +TF+GVLS C++AGL ++G
Sbjct: 301 RDVVTWNTLITGFAQNGHGEESLAVFRRMIEAKVEPNHVTFLGVLSGCNHAGLDNEGLQL 360
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
D M+ +Y ++P++ HY ++DLLGR + EAM+L+ ++ DGI+ VWGA+LGACR
Sbjct: 361 VDLMERQYGVKPKAEHYALLIDLLGRRNRLMEAMSLIEKV-PDGIKNHIAVWGAVLGACR 419
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
+H N+ + A E++ ELEP N+G Y++L +Y + G+ AKRI MKE ++KEP C
Sbjct: 420 VHGNLDLARKAAEKLFELEPENTGRYVMLANIYAASGKWGGAKRIRNVMKERCLEKEPAC 479
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRL 603
S I++ + H F++ D HP+ +
Sbjct: 480 SRIELRNARHEFVAKDKFHPQVEEI 504
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 194/426 (45%), Gaps = 53/426 (12%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D N +I Y K G ++A F +P + ++NT+I+ ++ A +FD M
Sbjct: 44 DAFLANGLIDAYSKCGCEESAHKTFGDLPNKTTRSWNTLISFYSKTGFFDEAHNLFDKMP 103
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-----IGALVNCQRMDLAE 134
R+VV++NS+ISG + + LR HG+ + + WN++ I A C +L+
Sbjct: 104 QRNVVSYNSLISGNL------QWLRQVHGVAVIVGMEWNVILNNALIDAYGKCGEPNLSF 157
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
S F M R+V SWT MV R R+ EA ++F MP K+ +W ++ G++ NG
Sbjct: 158 SVFCYMPERNVVSWTSMVVAYTRACRLDEACRVFKDMPVKNTVSWTALLTGFVRNGGCDE 217
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC---EKTWNSIISVLIRN 251
A D+F++M + + ++++ +A I KQ+ +K+ N + +V + N
Sbjct: 218 AFDVFKQMLEEGVRPSAPTFVSVIDACAQEALIGRGKQVHGQIIRGDKSGN-LFNVYVCN 276
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
L+ Y + G++ SA +FE+ RDV WN +I G
Sbjct: 277 ALIDM----------------------YAKCGDMKSAENLFEMAPMRDVVTWNTLITGFA 314
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+N GEE L F +M E+ P++ TF VL+ C+ + G Q+ + + Q+
Sbjct: 315 QNGHGEESLAVFRRMIEAKVEPNHVTFLGVLSGCNHAGLDNEGLQL----VDLMERQYGV 370
Query: 372 VSNA-----MITMYARCGNIQSALLEFSSVP---IHDIISWNSIICGLAYHG---YAEKA 420
A +I + R + A+ VP + I W +++ HG A KA
Sbjct: 371 KPKAEHYALLIDLLGRRNRLMEAMSLIEKVPDGIKNHIAVWGAVLGACRVHGNLDLARKA 430
Query: 421 LE-LFE 425
E LFE
Sbjct: 431 AEKLFE 436
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 62/259 (23%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----------- 50
R R+ EA +F MP ++TV+W ++ G+ +NG D A +F QM E
Sbjct: 180 RACRLDEACRVFKDMPVKNTVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAPTFVS 239
Query: 51 -------------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
+++ N +I + +++ A+ +F+
Sbjct: 240 VIDACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKSAENLFEMAP 299
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNC---------- 127
+RDVVTWN++I+G+ NG +E+L VF M ++ V N V +G L C
Sbjct: 300 MRDVVTWNTLITGFAQNGHGEESLAVFRRM-IEAKVEPNHVTFLGVLSGCNHAGLDNEGL 358
Query: 128 QRMDLAESYFKEMGARDVAS-WTIMVNGLVREGRIVEARKLFDKMP---AKDVQAWNLMI 183
Q +DL E ++ G + A + ++++ L R R++EA L +K+P + W ++
Sbjct: 359 QLVDLME---RQYGVKPKAEHYALLIDLLGRRNRLMEAMSLIEKVPDGIKNHIAVWGAVL 415
Query: 184 AGYLDNGCVGVAEDLFQKM 202
+G + +A +K+
Sbjct: 416 GACRVHGNLDLARKAAEKL 434
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 88/187 (47%), Gaps = 21/187 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ A+NLF+ P RD VTWN +I G+ +NG + ++ +F +M E + + G++
Sbjct: 288 MKSAENLFEMAPMRDVVTWNTLITGFAQNGHGEESLAVFRRMIEAKVEPNHVTFLGVLSG 347
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNG--LID---------EALRVFHGMP--LK 112
N G +G+++ D++ + + LID EA+ + +P +K
Sbjct: 348 CNHAGLDN--EGLQLVDLMERQYGVKPKAEHYALLIDLLGRRNRLMEAMSLIEKVPDGIK 405
Query: 113 DVVS-WNLVIGALVNCQRMDL----AESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
+ ++ W V+GA +DL AE F E+ + + ++ N G+ A+++
Sbjct: 406 NHIAVWGAVLGACRVHGNLDLARKAAEKLF-ELEPENTGRYVMLANIYAASGKWGGAKRI 464
Query: 168 FDKMPAK 174
+ M +
Sbjct: 465 RNVMKER 471
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 187/641 (29%), Positives = 325/641 (50%), Gaps = 31/641 (4%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
R + A+ +F++M RD+V+WN +I GY NGF ++A+ ++++ D FT ++
Sbjct: 168 RFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSS 227
Query: 58 VI---AGLMQSDNVQGAKEVFDGMEVR-DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
V+ LM V + + + DV+ N ++S Y + EA RVF M +KD
Sbjct: 228 VLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKD 287
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM---GARDVASWTIMV-----NGLVREGRIVEAR 165
V+WN +I R + + F +M D+ S T + +G ++ G+ V +
Sbjct: 288 SVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQVGKFVH-K 346
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
L D A N++I Y G + A+++F +D +W LING S
Sbjct: 347 YLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKE 406
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW---TNVIVG---- 278
+ FK M E+ +S+ VL+ + + A + + ++ + +I+G
Sbjct: 407 GLESFKMM--KMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLL 464
Query: 279 --YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + GE+ +KVF M+ D+ WN +I D G + +M+ G PD A
Sbjct: 465 DVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEA 524
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T +L +CS L G++IH K + NA+I MY++CG++++ + F +
Sbjct: 525 TVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYM 584
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
D+++W ++I +G +KAL+ F+ M L+ PD + F+ + ACS++G+V +G
Sbjct: 585 KEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGL 644
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
+FD MK Y L+PR HY CVVDLL R GL+ +A I + ++ ++WGALL A
Sbjct: 645 RFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEF---ILSMPMKPDASLWGALLSA 701
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
CR N + + ++++EL +++G Y++++ +Y + G+ + K + MK G+KKEP
Sbjct: 702 CRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEP 761
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
G SWI+I +VF +GD S ++ +++ LL L + +E
Sbjct: 762 GSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKE 802
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 99/183 (54%), Gaps = 1/183 (0%)
Query: 274 NVIVGYFEMGEVGSAIKVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+I Y ++ + S++ VF ++ T +V +WN +I L N L + L ++ +M+E
Sbjct: 59 KLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQ 118
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD TF SV+ C+ + L+LG +H A+++ + NA+I MY+R ++ +A
Sbjct: 119 PDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYV 178
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F + D +SWNS+I G +G+ E AL+++ + R+T PD T VL AC V
Sbjct: 179 FEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAV 238
Query: 453 DQG 455
+G
Sbjct: 239 KEG 241
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 11/257 (4%)
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPE--------TCEKTWNSIISVL-IRNGLVKEAHSY 260
W +I L ++ A+ Y+ +M E T NS +L + G + H+
Sbjct: 89 WNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHA- 147
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+E S++ +I Y ++ +A VFE M+ RD WN +I G N E+ L
Sbjct: 148 MEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDAL 207
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
+ + + +G PD T +SVL C L + G +H KI + N +++MY
Sbjct: 208 DMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMY 267
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+ ++ A FS + + D ++WN++ICG A G E +++LF M + F PD ++
Sbjct: 268 FKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSIT 326
Query: 441 GVLSACSYAGLVDQGRY 457
+ AC +G + G++
Sbjct: 327 STIRACGQSGDLQVGKF 343
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 196/663 (29%), Positives = 316/663 (47%), Gaps = 76/663 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTY- 55
+R A +F KMP+RD +WNVM+ GY K+G LD A+ L+++M D++T+
Sbjct: 134 VRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFP 193
Query: 56 ----------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVR 81
N ++ + +V A++VFD M V
Sbjct: 194 CVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVM 253
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF-KEM 140
D ++WN+MI+G+ NG + L +F M L D V NL+ V L++ F KEM
Sbjct: 254 DCISWNAMIAGHFENGECNAGLELFLTM-LHDEVQPNLMTITSVTVASGLLSDVTFAKEM 312
Query: 141 G--------ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A DVA ++ G + +AR +F +M +D W MI+GY NG
Sbjct: 313 HGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFP 372
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A +++ M +++ I + + ++ ++ E E I +++ N
Sbjct: 373 DKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESK-GFISYIVVTNA 431
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+ LE Y S + AI+VF+ M +DV W+ MI G
Sbjct: 432 I-------LEMYAKSK---------------RIDKAIEVFKCMHEKDVVSWSSMIAGFCF 469
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N E L +F M + P++ TF + L C+ L G++IHA ++ +
Sbjct: 470 NHRNFEALYYFRHML-ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYL 528
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
NA+I +Y +CG A +F + D++SWN +I G HG+ + AL F +M
Sbjct: 529 PNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGE 588
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
PD++TFV +L ACS G+V +G F M KY + P HY C+VDLL R G + EA
Sbjct: 589 CPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAY 648
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
N +NE+ I VWGALL CRIH ++++GE+A + V+ LEPN++G +++L ++Y
Sbjct: 649 NFINEMP---ITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYA 705
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
+ R+ M+E G+ + GCSW+++ H FL+ D SHP+ + +L ++
Sbjct: 706 DACLWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYE 765
Query: 613 EIE 615
++
Sbjct: 766 RMK 768
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 186/400 (46%), Gaps = 46/400 (11%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PL 111
N +++ L++ A VF M RDV +WN M+ GY +GL+DEAL ++H M
Sbjct: 127 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVR 186
Query: 112 KDVVSWNLVI---GALVNCQRMDLAESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKL 167
DV ++ V+ G + + + ++ G +V ++ + G ++ ARK+
Sbjct: 187 PDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKV 246
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
FD M D +WN MIAG+ +NG +LF M
Sbjct: 247 FDSMTVMDCISWNAMIAGHFENGECNAGLELFLTM------------------------- 281
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLV------KEAHSYLEKYPYSNIASWTNVIVG-YF 280
+ + + +I SV + +GL+ KE H K ++ ++ N ++ Y
Sbjct: 282 -----LHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYA 336
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+G + A VF M TRD W MI G +N ++ L+ + M+ + SPD+ T S
Sbjct: 337 SLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIAS 396
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
L C+ L +LD+G ++H A + V+NA++ MYA+ I A+ F + D
Sbjct: 397 ALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKD 456
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
++SW+S+I G ++ +AL F M L D KP+ +TF+
Sbjct: 457 VVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFI 495
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
++ S PD + ++ +C ++ G + A A + NAM++M R G
Sbjct: 79 LESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGE 138
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
A F+ +P D+ SWN ++ G G ++AL+L+ RM +PD TF VL +
Sbjct: 139 TWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRS 198
Query: 446 C 446
C
Sbjct: 199 C 199
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 191/659 (28%), Positives = 323/659 (49%), Gaps = 89/659 (13%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGA 71
+F+ + +T TWN ++R + +L N+ P + + Y +A + D
Sbjct: 60 IFNHLRNPNTFTWNTIMRAHL---YLQNS-------PHQALLHYKLFLASHAKPD----- 104
Query: 72 KEVFDGMEVRDVVTWNSMISGYVCNGLIDE-ALRVFHGMPLK-----DVVSWNLVIGALV 125
++ I C + E R H + DV N ++
Sbjct: 105 -------------SYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYA 151
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
C + A F+E D+ SW ++ G V+ G + EA ++F+ MP ++ A N MIA
Sbjct: 152 VCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIAL 211
Query: 186 YLDNGCVGVAEDLFQ--KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP--------- 234
+ GCV A +F + +RD+ SW +++ + + A+ F +M
Sbjct: 212 FGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEV 271
Query: 235 ------ETCEKTWNSIIS---------------VLIRNGLVKEAHSYLEKYPYSNI---- 269
C + N + V ++N L+ S E I
Sbjct: 272 VVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDG 331
Query: 270 ------ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
SW ++I GY G + A +F M +DV W+ MI G +++ E L F
Sbjct: 332 GELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALF 391
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMY 380
+M+ G PD S ++ C+ L TLDLG+ IHA I+RN+ +S +I MY
Sbjct: 392 QEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAY---ISRNKLQVNVILSTTLIDMY 448
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+CG +++AL F ++ + +WN++I GLA +G E++L +F M+ T P++ITF+
Sbjct: 449 MKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFM 508
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
GVL AC + GLV+ GR+YF+ M +++ ++ HY C+VDLLGR GL+ EA L+
Sbjct: 509 GVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELI----- 563
Query: 501 DGIEVSPTV--WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
D + ++P V WGALLGACR H + ++GE G ++++L+P++ G +++L+ +Y S G
Sbjct: 564 DSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWG 623
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
+ I M ++GV K PGCS I+ N H FL+GD +HP+ + + ++L+++ +++ E
Sbjct: 624 NVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIE 682
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 229/469 (48%), Gaps = 41/469 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ A+ +F++ P D V+WN ++ GY + G ++ A +F MPER+ N++IA +
Sbjct: 156 VGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRK 215
Query: 66 DNVQGAKEVFDGM--EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD-VVSWNLVIG 122
V+ A+ +F+G+ RD+V+W++M+S Y N + +EAL +F M V +V+
Sbjct: 216 GCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVS 275
Query: 123 ALVNCQRMDLAE------SYFKEMGARDVASWTIMVNGLVRE----GRIVEARKLFDK-M 171
AL C R+ E ++G D S + N L+ G IV+AR++FD
Sbjct: 276 ALSACSRVLNVEMGRWVHGLAVKVGVEDYVS---LKNALIHLYSSCGEIVDARRIFDDGG 332
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
D+ +WN MI+GYL G + AE LF M ++D+ SW +I+G A++ F+
Sbjct: 333 ELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQ 392
Query: 232 QMP-------ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMG 283
+M ET + S + L L K H+Y+ + N+ T +I Y + G
Sbjct: 393 EMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCG 452
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
V +A++VF M + V+ WN +I GL N E+ L F MK++G P+ TF VL
Sbjct: 453 CVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLG 512
Query: 344 ICSDLPTLDLGRQ-----IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
C + ++ GR IH I+ + M+ + R G ++ A S+P+
Sbjct: 513 ACRHMGLVNDGRHYFNSMIHEHKIEANIKHY----GCMVDLLGRAGLLKEAEELIDSMPM 568
Query: 399 H-DIISWNSIICGLAYHGYAEKALELFERM--RLTDFKPDDITFVGVLS 444
D+ +W +++ H + E+ ER+ +L +PD F +LS
Sbjct: 569 APDVATWGALLGACRKH----RDNEMGERLGRKLIQLQPDHDGFHVLLS 613
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 152/335 (45%), Gaps = 28/335 (8%)
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-----NIASWTNVIVGYFEMGEVGSAIKV 291
C + + ++S I GL+ + PY+ N +S + +V + ++++
Sbjct: 15 CPRHFKQLLSQTILTGLITD--------PYAASRLINFSSHSTTLVPFH------YSLRI 60
Query: 292 FELMTTRDVTVWN-VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
F + + WN +M L + + L + S PD+ T+ +L C+ +
Sbjct: 61 FNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVS 120
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
GRQ+HA A+ + V N ++ +YA CG++ SA F P+ D++SWN+++ G
Sbjct: 121 EFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAG 180
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
G E+A +FE M + + I +++ G V++ R F+ ++ + +
Sbjct: 181 YVQAGEVEEAERVFEGMP----ERNTIASNSMIALFGRKGCVEKARRIFNGVRGR---ER 233
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE-IA 529
++ +V + + +EA+ L E++ G+ V V + L AC N+++G +
Sbjct: 234 DMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVH 293
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
G V + + L +Y SCG DA+RIF
Sbjct: 294 GLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIF 328
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 102/234 (43%), Gaps = 49/234 (20%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PE----- 49
+R IQ+A+ LF MP++D V+W+ MI GY ++ A+ LF +M P+
Sbjct: 348 LRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALV 407
Query: 50 -----------------------RDMFTYN-----TVIAGLMQSDNVQGAKEVFDGMEVR 81
R+ N T+I M+ V+ A EVF ME +
Sbjct: 408 SAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEK 467
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQRMDL---AESYF 137
V TWN++I G NG ++++L +F M V + +G L C+ M L YF
Sbjct: 468 GVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYF 527
Query: 138 KEMGAR-----DVASWTIMVNGLVREGRIVEARKLFDKMP-AKDVQAWNLMIAG 185
M ++ + MV+ L R G + EA +L D MP A DV W ++
Sbjct: 528 NSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGA 581
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 201/644 (31%), Positives = 312/644 (48%), Gaps = 81/644 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-----ERDMFTY----- 55
I +A LF +P D +NV+IR + N +A+ L+ + E D FTY
Sbjct: 58 IDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVIS 117
Query: 56 ---------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
+ ++A + V A++VFDGM RD V WN+
Sbjct: 118 GASSLGLGLLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNT 177
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN--CQRMDLAESYFKEMGARDVA 146
M+SG V N DEA+ +F M + + + A++ + DLA + A V
Sbjct: 178 MVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVG 237
Query: 147 --SWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
S ++ GL + G I AR LF ++ D+ ++N MI+GY N + LF+
Sbjct: 238 FHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFK 297
Query: 201 KMHDRDLTSWKQLING-LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
++ L++G VNS I I F L + H
Sbjct: 298 EL----------LVSGEKVNSSSIVGLIPVFFPFGHL---------------HLTRCIHG 332
Query: 260 YLEK-YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
+ K SN + T + Y + E+ SA +F+ + + + WN MI G +N L E+
Sbjct: 333 FCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEK 392
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNA 375
+ F +M++ P+ T TS+L+ C+ L L LG+ +H I R F + VS A
Sbjct: 393 AISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDL---INRESFESNIFVSTA 449
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
+I MYA+CG+I A FS +P + ++WN++I G HGY +AL LF M + P
Sbjct: 450 LIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPT 509
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
+TF+ VL ACS+AGLV +G F M + + +P HY C+VDLLGR G +D+A++
Sbjct: 510 GVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDF- 568
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
IR +E P VWGALLGAC IH + + +A +++ EL+P N G Y++L+ +Y +
Sbjct: 569 --IRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQ 626
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
+A + +K + K PGC+ I++ + H+F SGD SHP+
Sbjct: 627 NYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQ 670
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 197/510 (38%), Gaps = 102/510 (20%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+R+ A+ +FD M +RDTV WN M+ G KN D A+ +F M + + +T +A ++
Sbjct: 155 SRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVL 214
Query: 64 ---------------------------------------QSDNVQGAKEVFDGMEVRDVV 84
+ ++ A+ +F + D+V
Sbjct: 215 PGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLV 274
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM-DLAESYF------ 137
++N+MISGY CN + ++R+F + LV G VN + L +F
Sbjct: 275 SYNAMISGYTCNNETESSVRLFKEL---------LVSGEKVNSSSIVGLIPVFFPFGHLH 325
Query: 138 ----------KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
K + + T + R I AR LFD+ K + +WN MI+GY
Sbjct: 326 LTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYA 385
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
NG A LFQ+M ++ N + + +S Q+ W
Sbjct: 386 QNGLTEKAISLFQEMQKCEVRP---------NPVTVTSILSACAQLGALSLGKW------ 430
Query: 248 LIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVM 306
H + + + SNI T +I Y + G + A ++F +M ++ WN M
Sbjct: 431 ---------VHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAM 481
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI-----HAQA 361
I G G + G E L F +M S SP TF SVL CS + G +I H
Sbjct: 482 ISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHG 541
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD-IISWNSIICGLAYHGYAEKA 420
+ + M+ + R GN+ AL +P+ W +++ H A
Sbjct: 542 FEPLPEHYA----CMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDAN-- 595
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAG 450
L +L + P ++ + +LS AG
Sbjct: 596 LARLASDKLFELDPQNVGYYVLLSNIYSAG 625
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 204/673 (30%), Positives = 322/673 (47%), Gaps = 59/673 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
+ +++ A+ LFD+MPQR V+WN MI Y K+G A+ L M M T+++
Sbjct: 84 KQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSS 143
Query: 58 VIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V++ + ++ K + G E ++V ++++ Y I EA RVF + +
Sbjct: 144 VLSVCARLRCLRDGKLIHCLVLKSGSESFELVG-SALLYFYASCFEIGEARRVFDVLVRR 202
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREG----RIVEARKLF 168
+ V W+L++ V C MD A S F +M RDV +WT +++G + G + +E +L
Sbjct: 203 NEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEMFRLM 262
Query: 169 ----DKMPAK---------------------------------DVQAWNLMIAGYLDNGC 191
+ P + D ++ Y +
Sbjct: 263 MRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEA 322
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN 251
+ A + + + + L + LI GL++ RI+ A F M E ++N +I
Sbjct: 323 IDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVG 382
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE-LMTTRDVTVWNVMIFGL 310
G + ++ EK P I S +I Y GE+ A+++FE +D WN MI G
Sbjct: 383 GQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGY 442
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+ EE LK ++ M +TF+++ CS L +L G+ +HA IK
Sbjct: 443 IHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNV 502
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
V ++I MY++CG+I A F S+ ++ +W ++I G AYHG +A+ LF+ M
Sbjct: 503 YVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQ 562
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
P+ TFVGVLSACS AGLV++G F M+ Y + P HY CVVDLLGR G I E
Sbjct: 563 GLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIRE 622
Query: 491 AMNLLNE--IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
A + + + ADG+ VWGALL AC +++VGE E++ +P Y+IL+
Sbjct: 623 AEEFIKKMPLEADGV-----VWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILS 677
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
+Y GR + + ++ VKK+PGCSWI++N+ HVF D SHP + + L
Sbjct: 678 NIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELNNKIHVFSIEDRSHPYCNMIYATLE 737
Query: 609 LLHTEIEREILFD 621
L I + FD
Sbjct: 738 HLTANINSVVHFD 750
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 197/468 (42%), Gaps = 54/468 (11%)
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
++ S I ++ ++ ++ AR+LFD+MP + V +WN MI+ Y +G A L MH
Sbjct: 71 EIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMH 130
Query: 204 DRDL----TSWKQLINGLVNSRRI-DAAISY---FKQMPETCEKTWNSIISVLIRNGLVK 255
+ +++ +++ R + D + + K E+ E ++++ +
Sbjct: 131 RSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIG 190
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
EA + N W+ ++VGY + A+ VF M RDV W +I G +N
Sbjct: 191 EARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGD 250
Query: 316 G-EEGLKFFVQMKESG-PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
G + L+ F M SG +P+ TF V+ C L L +GR +H +K ++
Sbjct: 251 GCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIG 310
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
A++ Y C I AL V + + NS+I GL G E A +F M T+
Sbjct: 311 GALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGM--TEMN 368
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
P +++ ++ + G +D + F+ M + + ++ + R G ID+A+
Sbjct: 369 P--VSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNT-----MISVYSRNGEIDKALE 421
Query: 494 LLNEIRAD--------------------------------GIEVSPTVWGALLGACRIHN 521
L E + + I+ + + + AL AC
Sbjct: 422 LFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLG 481
Query: 522 NIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQM 567
+++ G++ +++ P S VY+ L +MY CG +A+ F +
Sbjct: 482 SLQQGQLLHAHLIK-TPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSI 528
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 141/334 (42%), Gaps = 41/334 (12%)
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
S I S I Y + ++ A ++F+ M R V WN MI ++ E L M
Sbjct: 70 SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 129
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
S +TF+SVL++C+ L L G+ IH +K F V +A++ YA C I
Sbjct: 130 HRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEI 189
Query: 387 -------------------------------QSALLEFSSVPIHDIISWNSIICGLAYHG 415
AL F +P D+++W ++I G + +G
Sbjct: 190 GEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNG 249
Query: 416 -YAEKALELFE-RMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSA 473
KALE+F MR + P++ TF V+ AC G++ GR + K L+ +
Sbjct: 250 DGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLM-KCGLEYDPS 308
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV 533
+V+ ID+A+ + + + ++ L+ RI + E+ +
Sbjct: 309 IGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIED----AELVFNGM 364
Query: 534 MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
E+ P + Y ++ + Y G+ +D+KR+F +M
Sbjct: 365 TEMNPVS---YNLMIKGYAVGGQMDDSKRLFEKM 395
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 193/617 (31%), Positives = 319/617 (51%), Gaps = 56/617 (9%)
Query: 20 DTVTWNVMIR-----GYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEV 74
D T+ V+++ G + G ++ + + +++T N+++A + V A+ V
Sbjct: 106 DRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERV 165
Query: 75 FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNCQRMDL 132
FDGM VRD+VTWNSM+ GYV NGL AL F M V + V I AL C +D
Sbjct: 166 FDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACC-LDS 224
Query: 133 AESYFKEMGA--------RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
A +E+ A +DV T +++ + G I A +F MP++ V WN MI
Sbjct: 225 ALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIG 284
Query: 185 GYLDNGCVGVAEDLFQKM----HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
GY NGC A D F +M H ++ + L+ C +T
Sbjct: 285 GYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLL--------------------AACAQT 324
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+S+ + H Y+ + + ++ T ++ Y ++G+V S+ +F MT +
Sbjct: 325 ESSLYG--------RSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKT 376
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
+ WN MI ++ E + F+++ PD T ++V+ L L RQ+H+
Sbjct: 377 LVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHS 436
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
+++ + T V+NA++ MYARCG++ S+ F + D+ISWN+II G A HG +
Sbjct: 437 YIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKI 496
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
ALE+F M+ +P++ TFV VL+ACS +G+ D+G F+ M+ Y + P+ HY C+
Sbjct: 497 ALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYGCMT 556
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGERVMELE 537
DLLGR G + E + + + I ++PT +WG+LL A R N+I + E A ER+ ELE
Sbjct: 557 DLLGRAGDLREVLKFI-----ESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELE 611
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
+N+G Y+IL+ MY GR ED +RI + M E G+++ S ++++ F++GD +H
Sbjct: 612 HDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGDMTH 671
Query: 598 PKFHRLRYLLNLLHTEI 614
P+ + + ++L +I
Sbjct: 672 PQSKTIHEVSDVLSRKI 688
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 192/459 (41%), Gaps = 85/459 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTV------- 58
+ +A+ +FD MP RD VTWN M+ GY NG A+ F +M E ++ V
Sbjct: 159 VADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALA 218
Query: 59 ----IAGLMQSDNVQG-----------------------------AKEVFDGMEVRDVVT 85
+ LMQ V A+ +F M R VVT
Sbjct: 219 ACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVT 278
Query: 86 WNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
WN MI GY NG +EA F G ++ V + NL + A + S +
Sbjct: 279 WNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINL-LAACAQTESSLYGRSVHGYV 337
Query: 141 GARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
++ L+ + G++ + +F +M K + +WN MIA Y
Sbjct: 338 TRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAY---------- 387
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
++++M++ +T + +L+N + YF T ++++ + GL+++
Sbjct: 388 -MYKEMYNEAITLFLELLNQPLYP-------DYF---------TMSAVVPAFVLLGLLRQ 430
Query: 257 A---HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
HSY+ + Y TN ++ Y G+V S+ K+F+ M +DV WN +I G
Sbjct: 431 CRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAI 490
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
+ G+ L+ F +MK +G P+ +TF SVLT CS D G I ++ +
Sbjct: 491 HGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEG-WIQFNLMQRDYGIIPQI 549
Query: 373 SN--AMITMYARCGNIQSALLEFSSVPIHDIIS-WNSII 408
+ M + R G+++ L S+PI W S++
Sbjct: 550 EHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLL 588
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 196/651 (30%), Positives = 332/651 (50%), Gaps = 52/651 (7%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI- 59
R+ EA + F + + NVMIRG+ +A+ + M D FT+ V+
Sbjct: 69 RMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLK 128
Query: 60 ----AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
AG + A + G+ DV T NS+++ Y GL+ +A RVF GMP +D+V
Sbjct: 129 CCARAGALGEGRAAHAAVIKLGLGA-DVYTANSLVALYAKLGLVGDAERVFDGMPARDIV 187
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMG-----ARDVASWTIMVNGLVREGRIVEARKLFDK 170
SWN ++ V+ LA + F+EM D + E + R++
Sbjct: 188 SWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGY 247
Query: 171 MP----AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL-VNSRRIDA 225
+DV+ ++ Y G V AE++F KM R + +W +I G +N R +DA
Sbjct: 248 AIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDA 307
Query: 226 AISYFKQMP---------------ETCEKTWNSIISVLIRNGLVKEAHSYL-EKYPYSNI 269
F QM C +T +S+ + H+Y+ ++ ++
Sbjct: 308 -FDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFG--------RSVHAYVVRRHFLPHV 358
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
T ++ Y ++G+V S+ K+F +T + + WN MI ++ +E + F+++
Sbjct: 359 VLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQ 418
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
PD T T+V+ L ++ +Q+H+ +K+ T + NA++ MYARCGNI ++
Sbjct: 419 PLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVAS 478
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F +P D+ISWN+II G A HG + ALE+F+ M+ + +P++ TFV VL+ACS +
Sbjct: 479 REIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVS 538
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT- 508
GL +G F+ M+ +Y + P+ HY C+ DLLGR G + E + + + + ++PT
Sbjct: 539 GLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFI-----ENMPIAPTS 593
Query: 509 -VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+WG+LL A R N+I + E A ER+ +LE NN+G Y++L+ MY GR ED +RI + M
Sbjct: 594 RIWGSLLTASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLM 653
Query: 568 KENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREI 618
KE G+++ S +++N+ F++GD SHP+ ++ ++L I ++
Sbjct: 654 KEKGLRRTEARSLVELNNKECSFVNGDMSHPQSEKIHEFSDILSRNIGEDL 704
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 135/331 (40%), Gaps = 36/331 (10%)
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++I+ + G + A F +T + NVMI G + DL + L + M ++G P
Sbjct: 59 SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D TF VL C+ L GR HA IK+ +N+++ +YA+ G + A F
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVF 178
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMR-LTDFKPDDITFVGVLSACSYAGLV 452
+P DI+SWN+++ G +G AL F M D + + L+AC +
Sbjct: 179 DGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESAL 238
Query: 453 DQGR-----------------------YYFDCMKNKYFLQPRSAHYT--CVVD---LLGR 484
GR Y C N +F + A VV ++G
Sbjct: 239 ALGREIHGYAIRHGLEQDVKVGTSLVDMYCKC-GNVFFAENVFAKMPLRTVVTWNCMIGG 297
Query: 485 FGLID---EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE--PN 539
+ L + +A + ++R DG +V LL AC + G V+ P+
Sbjct: 298 YALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPH 357
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
+ L EMY G+ E +++IF Q+ +
Sbjct: 358 VV-LETALLEMYGKVGKVESSEKIFGQITDK 387
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 10/143 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R I ++ +FDKMP +D ++WN +I GY +G A+ +F++M M +
Sbjct: 471 RCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVS 530
Query: 62 LMQSDNVQGAK----EVFDGME-----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++ + +V G + + F+ M+ + + + M G + E LR MP+
Sbjct: 531 VLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIA 590
Query: 113 DVVS-WNLVIGALVNCQRMDLAE 134
W ++ A N +D+AE
Sbjct: 591 PTSRIWGSLLTASRNKNDIDIAE 613
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 270/507 (53%), Gaps = 43/507 (8%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
++N + G+ VEARK+FDKM A+++ +WN M++GY G + A LF KM ++D+ SW
Sbjct: 101 LINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSW 160
Query: 211 KQLINGLVNSRRIDAAISY---FKQMPETCEK---------------------------- 239
++ D A+ + F+Q+ C
Sbjct: 161 NTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILV 220
Query: 240 --------TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
+S++ ++ GL+ +A ++ ++ +WT ++ GY + G++ SA ++
Sbjct: 221 AGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANEL 280
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F M ++ W +I G N +G + L+ F +M PD TF+S L C+ + +L
Sbjct: 281 FVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASL 340
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICG 410
G+QIHA ++I T V +A+I MY++CG++ F + D++ WN+II
Sbjct: 341 KHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISA 400
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
LA HG E+A+++ + M + KPD ITFV +L+ACS++GLV QG +F+ M Y + P
Sbjct: 401 LAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVP 460
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
HY C++DLLGR G +E M+ L ++ + VW ALLG CRIH +I++G A
Sbjct: 461 SQEHYACLIDLLGRAGCFEEVMDQLEKM---PYKPDDRVWNALLGVCRIHGHIELGRKAA 517
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVF 590
ER++ELEP +S Y++L+ +Y GR E +++ M E VKKE SW++I + H F
Sbjct: 518 ERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKVHSF 577
Query: 591 LSGDSSHPKFHRLRYLLNLLHTEIERE 617
DSSHP ++ +L L ++E +
Sbjct: 578 SVSDSSHPLKEQIYSVLEQLAGQMEED 604
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 228/504 (45%), Gaps = 74/504 (14%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDN 67
EA+ +FDKM R+ +WN M+ GY K G + A LF++MPE+D+ ++NT++ Q
Sbjct: 113 EARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGY 172
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGY--VCNGLIDEAL-RVFHGMP-----LKDVVSWNL 119
A + + +G VC L + L R HG L +VV +
Sbjct: 173 WDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSS 232
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
V+ A V C M A F EM ARDV +WT MV+G + G + A +LF +MP K+ +W
Sbjct: 233 VLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSW 292
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
+I+GY NG A +LF KM L + R S +C
Sbjct: 293 TALISGYARNGMGHKALELFTKMM-------------LFHVRPDQFTFS-------SCLC 332
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
SI S +++G K+ H+YL + + N + +I Y + G +G KVF+LM +
Sbjct: 333 ACASIAS--LKHG--KQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNK 388
Query: 299 -DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
DV +WN +I L ++ GEE ++ M SG PD TF +L CS
Sbjct: 389 LDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACS----------- 437
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H+ ++ N F ++S ++ VP + + +I L G
Sbjct: 438 HSGLVQQGLNFFESMS-----------------CDYGIVPSQE--HYACLIDLLGRAGCF 478
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH--- 474
E+ ++ E+M +KPDD + +L C G ++ GR + + L+P+S+
Sbjct: 479 EEVMDQLEKM---PYKPDDRVWNALLGVCRIHGHIELGRKAAERLIE---LEPQSSTAYV 532
Query: 475 -YTCVVDLLGRFGLIDEAMNLLNE 497
+ + +LGR+ + + L+NE
Sbjct: 533 LLSSIYAVLGRWESVQKVRQLMNE 556
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 148/342 (43%), Gaps = 70/342 (20%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N +I++ + G EA +K N+ SW N++ GY ++G + A K+F+ M +DV
Sbjct: 99 NHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVV 158
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN M+ + +E L+F+ + ++ G + +F VLT+C L + L RQ+H Q
Sbjct: 159 SWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQI 218
Query: 362 IKI------------------------ARNQFTTVS-------NAMITMYARCGNIQSAL 390
+ AR F +S M++ YA+ G+++SA
Sbjct: 219 LVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSAN 278
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS--- 447
F +P + +SW ++I G A +G KALELF +M L +PD TF L AC+
Sbjct: 279 ELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIA 338
Query: 448 -----------------------YAGLVDQ---------GRYYFDCMKNKYFLQPRSAHY 475
+ L+D GR FD M NK + +
Sbjct: 339 SLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDV----VLW 394
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
++ L + G +EA+ +L+++ G + + +L AC
Sbjct: 395 NTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNAC 436
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 191/435 (43%), Gaps = 39/435 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAG 61
I+ A+ LFDKMP++D V+WN M+ + + G+ D A+ +++ + + F++ V+
Sbjct: 142 IKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTV 201
Query: 62 LMQSDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
++ V ++V + V +VV +S++ YV GL+ +A ++F M +DV++W
Sbjct: 202 CVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAW 261
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
++ M A F EM ++ SWT +++G R G +A +LF KM V+
Sbjct: 262 TTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVR 321
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ----- 232
+ C+ + H + + ++ IN N+ + A I + +
Sbjct: 322 PDQFTFS-----SCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLG 376
Query: 233 --------MPETCEKT-WNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGY 279
M + WN+IIS L ++G +EA L+ S ++ ++
Sbjct: 377 IGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNAC 436
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL--KFFVQMKESGPSPDNAT 337
G V + FE M+ V + + + LG G + Q+++ PD+
Sbjct: 437 SHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRV 496
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA-----LLE 392
+ ++L +C ++LGR+ + I++ Q +T + ++YA G +S L+
Sbjct: 497 WNALLGVCRIHGHIELGRKAAERLIEL-EPQSSTAYVLLSSIYAVLGRWESVQKVRQLMN 555
Query: 393 FSSVPIHDIISWNSI 407
V ISW I
Sbjct: 556 ERQVKKERAISWLEI 570
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 206/733 (28%), Positives = 327/733 (44%), Gaps = 130/733 (17%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS--- 65
A +LF MP D V+WN ++ GY + G +++ L +M R + T +A L+++
Sbjct: 89 AASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGG 148
Query: 66 ------------------------------------DNVQGAKEVFDGMEVRDVVTWNSM 89
+++ A F GM R+ V+W +
Sbjct: 149 LEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAA 208
Query: 90 ISGYVCNGLIDEALRVF----------------------------------HGMPLKDVV 115
I+G V N L +F H +K+
Sbjct: 209 IAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKF 268
Query: 116 SWNLVIGALV-----NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF-- 168
S + V+G + + A F + V + M+ GLVR G EA +LF
Sbjct: 269 SADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQF 328
Query: 169 --------DKMPAKDVQAWNLMIAGYLDN---------------------------GCVG 193
D + V + + GYL C
Sbjct: 329 MTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKA 388
Query: 194 VAED--LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM----PETCEKTWNSIISV 247
+ E +FQ+M RD SW +I L + + I+Y +M E + T+ S++
Sbjct: 389 LVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKA 448
Query: 248 L-----IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
+ G V + S T V+ Y + G + A K+ + + +++
Sbjct: 449 CAGLQSLEYGSVVHGKAIKSGLGLDAFVSST-VVDMYCKCGMITEAQKLHDRIGGQELVS 507
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
WN +I G N EE KFF +M + G PD+ T+ +VL C++L T++LG+QIH Q I
Sbjct: 508 WNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQII 567
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
K +S+ ++ MYA+CGN+ +LL F D +SWN++ICG A HG +ALE
Sbjct: 568 KQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALE 627
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
+FERM+ + P+ TFV VL ACS+ GL+D G YF M ++Y L+P+ H+ C+VD+L
Sbjct: 628 MFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDIL 687
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
GR EA+ IR+ +E +W LL C+I +++V E A V+ L+P++S
Sbjct: 688 GRSKGPQEALKF---IRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSS 744
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHR 602
VY++L+ +Y G+ D R M++ +KKEPGCSWI++ H FL+GD HP+
Sbjct: 745 VYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPRSRE 804
Query: 603 LRYLLNLLHTEIE 615
+ +LN L E++
Sbjct: 805 VYEMLNNLIVEMK 817
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/505 (25%), Positives = 218/505 (43%), Gaps = 57/505 (11%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDN 67
A+ +FD MP RDTV+WN M+ Y G A LF MP+ D+ ++N +++G Q
Sbjct: 57 HARGVFDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGM 116
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYV--CNGLIDEALRV-FHGMPLK-----DVVSWNL 119
+ + + M R V + ++ + C GL D AL V H + +K DV + +
Sbjct: 117 FRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSA 176
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++ C+ ++ A +F MG R+ SW + G V+ + +LF +M +
Sbjct: 177 LVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVS 236
Query: 180 NLMIAGYLDN----GCVGVAEDLFQKMHDRDLTSWKQLINGLVN-----SRRIDAAISYF 230
A + C+ A L ++ + + +V+ +DA ++F
Sbjct: 237 QPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFF 296
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----------SWTNVIVGYF 280
+P + N+++ L+R GL EA + S I S + GY
Sbjct: 297 S-LPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYL 355
Query: 281 EMGEVGS-AIK----------------------------VFELMTTRDVTVWNVMIFGLG 311
+ +V AIK VF+ M RD WN +I L
Sbjct: 356 QGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALE 415
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+N+ E+ + + +M G PD+ T+ SVL C+ L +L+ G +H +AIK
Sbjct: 416 QNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAF 475
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
VS+ ++ MY +CG I A + +++SWNSII G + + +E+A + F M
Sbjct: 476 VSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIG 535
Query: 432 FKPDDITFVGVLSACSYAGLVDQGR 456
KPD T+ VL C+ ++ G+
Sbjct: 536 VKPDHFTYATVLDTCANLATIELGK 560
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 198/450 (44%), Gaps = 45/450 (10%)
Query: 156 VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
R G AR +FD MP +D +WN M+ Y G G A LF M D D+ SW L++
Sbjct: 50 ARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLS 109
Query: 216 GLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN-------GLVKEAHSYLEKYPYS- 267
G ++ +M + ++VL++ L + H+ K
Sbjct: 110 GYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEM 169
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
++ + + ++ Y + + A++ F M R+ W I G +N+ GL+ FVQM+
Sbjct: 170 DVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQ 229
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMYARCG 384
G + SV C+ + L RQ+HA AIK N+F+ V A++ +YA+
Sbjct: 230 RLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIK---NKFSADRVVGTAIVDVYAKAD 286
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
++ A F S+P H + + N+++ GL G +AL+LF+ M + D ++ GV S
Sbjct: 287 SLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFS 346
Query: 445 ACSYAGLVDQG--------RYYFD---CMKN--------------KYFL-----QPRSAH 474
AC+ QG + FD C++N Y + Q S
Sbjct: 347 ACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVS 406
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA-GERV 533
+ ++ L + ++ + LNE+ G+E +G++L AC +++ G + G+ +
Sbjct: 407 WNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAI 466
Query: 534 MELEPNNSGVYLILTEMYLSCGRREDAKRI 563
++ V + +MY CG +A+++
Sbjct: 467 KSGLGLDAFVSSTVVDMYCKCGMITEAQKL 496
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 1/226 (0%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N ++ + R G A + P+ + SW ++ Y G+ G+A +F M DV
Sbjct: 43 NCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVV 102
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN ++ G + + + + V+M G +PD T +L C L L LG QIHA A
Sbjct: 103 SWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVA 162
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
+K +A++ MY +C +++ AL F + + +SW + I G + + L
Sbjct: 163 VKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGL 222
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-YYFDCMKNKY 466
ELF +M+ + V +C+ + R + +KNK+
Sbjct: 223 ELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKF 268
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 94/241 (39%), Gaps = 49/241 (20%)
Query: 335 NATFTSVLTICSDL--PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
ATF+ + +C+ L G+ HA+ + T VSN ++ MYARCG A
Sbjct: 2 TATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGV 61
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F +P D +SWN+++ A+ G A LF M PD +++ +LS
Sbjct: 62 FDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMP----DPDVVSWNALLSG------- 110
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
C + G+ +++ L E+ G+ T
Sbjct: 111 -------YCQR----------------------GMFRDSVGLSVEMARRGVAPDRTTLAV 141
Query: 513 LLGACRIHNNIKVG----EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
LL AC ++ +G +A + +E++ L +MY C EDA R F M
Sbjct: 142 LLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSA---LVDMYGKCRSLEDALRFFHGMG 198
Query: 569 E 569
E
Sbjct: 199 E 199
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/459 (34%), Positives = 258/459 (56%), Gaps = 12/459 (2%)
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL 213
G V +GRIV A + + N+++ Y GC+ A +F +M +D+ +W L
Sbjct: 101 GKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTAL 160
Query: 214 INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR-----NGLVK--EAHSYLEKYPY 266
I G + R A+ F QM + + +S L++ +GL + H++ KY Y
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGY 220
Query: 267 -SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
S++ + ++ Y G + +A F+ M T+ WN +I G GE L +
Sbjct: 221 QSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWK 280
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ P + T++SV + C+ + L+ G+ +HA IK + N ++ MYA+ G+
Sbjct: 281 MQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGS 340
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
I A F + D++SWN+++ G A HG ++ L+ FE+M +P++I+F+ VL+A
Sbjct: 341 IDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTA 400
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
CS++GL+D+G YYF+ MK KY ++P HY VDLLGR GL+D A + E+ IE
Sbjct: 401 CSHSGLLDEGLYYFELMK-KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREM---PIEP 456
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
+ VWGALLGACR+H N+++G A ER EL+P++SG ++L+ +Y S GR D ++
Sbjct: 457 TAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRK 516
Query: 566 QMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
MKE+GVKK+P CSW++I + H+F++ D +HP+ +R
Sbjct: 517 MMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIR 555
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 50/331 (15%)
Query: 36 FLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC 95
FLDN + L N ++ + + A+ +FD M +D+VTW ++I+G+
Sbjct: 118 FLDNHLVL-----------QNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQ 166
Query: 96 NGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA--------RDVAS 147
N +AL +F M + + + +L+ + ++ A V
Sbjct: 167 NNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYV 226
Query: 148 WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL 207
+ +V+ R G + A+ FD MP K +WN +I+G+ G A L KM ++
Sbjct: 227 GSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNF 286
Query: 208 TSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA---HSYLEKY 264
++F T++S+ S G +++ H+++ K
Sbjct: 287 QP------------------THF---------TYSSVFSACASIGALEQGKWVHAHMIKS 319
Query: 265 PYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
IA N ++ Y + G + A +VF+ + DV WN M+ G ++ LG+E L F
Sbjct: 320 GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRF 379
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
QM G P+ +F VLT CS LD G
Sbjct: 380 EQMLRIGIEPNEISFLCVLTACSHSGLLDEG 410
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 116/250 (46%), Gaps = 21/250 (8%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA-RNQFTTVSNAMITMYARCGNIQSALL 391
PD ++ +L C+ L ++ GR +HA + + + N ++ MYA+CG + A
Sbjct: 85 PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F +P D+++W ++I G + + AL LF +M +P+ T +L A
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHG 204
Query: 452 VDQG-RYYFDCMKNKYFLQPRSAHY--TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
+D G + + C+K Y +S+ Y + +VD+ R G +D A ++ DG+
Sbjct: 205 LDPGTQLHAFCLKYGY----QSSVYVGSALVDMYARCGHMDAA-----QLAFDGMPTKSE 255
Query: 509 V-WGALLGACRIHNNIKVGEIAGERVMELEPNN-SGVYLILTEMYLSC---GRREDAKRI 563
V W AL+ H GE A + +++ N + + ++ +C G E K +
Sbjct: 256 VSWNALISG---HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWV 312
Query: 564 FAQMKENGVK 573
A M ++G+K
Sbjct: 313 HAHMIKSGLK 322
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 144/364 (39%), Gaps = 91/364 (25%)
Query: 22 VTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM--- 78
V N+++ Y K G LD+A +F++MP +DM T+ +IAG Q++ + A +F M
Sbjct: 124 VLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRL 183
Query: 79 ------------------------------------EVRDVVTWNSMISGYVCNGLIDEA 102
V ++++ Y G +D A
Sbjct: 184 GLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAA 243
Query: 103 LRVFHGMPLKDVVSWNLVIGA-------------LVNCQRMDLAESYFK---------EM 140
F GMP K VSWN +I L QR + ++F +
Sbjct: 244 QLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASI 303
Query: 141 GARDVASWT---IMVNGL--------------VREGRIVEARKLFDKMPAKDVQAWNLMI 183
GA + W ++ +GL + G I +A+++FD++ DV +WN M+
Sbjct: 304 GALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTML 363
Query: 184 AGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMP----E 235
G +G D F++M + + S+ ++ +S +D + YF+ M E
Sbjct: 364 TGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVE 423
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE-----VGSAIK 290
+ + + +L R GL+ A ++ + P A+ ++G M + V +A +
Sbjct: 424 PDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAER 483
Query: 291 VFEL 294
FEL
Sbjct: 484 AFEL 487
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 172/558 (30%), Positives = 310/558 (55%), Gaps = 29/558 (5%)
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVI 121
D + A VF+ + + + WN M G+ + AL+++ M L + ++ ++
Sbjct: 23 DGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLL 82
Query: 122 GALVNCQRMDLAES---YFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
+ + + + ++G D+ T +++ + GR+ +A+K+FD+ +DV
Sbjct: 83 KSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVV 142
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
++ +I GY G + A+ +F ++ +D+ SW +I+G + A+ FK+M +T
Sbjct: 143 SYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTN 202
Query: 238 ----EKTWNSIISVLIRNG---LVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAI 289
E T +++S ++G L ++ HS++ + + SN+ +I Y + GEV +A
Sbjct: 203 VKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETAC 262
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
++ E ++ +DV WN +I G +L +E L F +M SG +P++ T S+L C+ L
Sbjct: 263 ELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 322
Query: 350 TLDLGRQIHAQAIK----IARNQFTTVSNAMITMYARCGNIQSA-LLEFSSVPIHDIISW 404
+D+GR IH K + +++ ++I MYA+CG+I +A + SS + +W
Sbjct: 323 AIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTW 382
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
N++I G A HG A A ++F RMR +PDDITFVG+LSACS++G++D GR F M+
Sbjct: 383 NAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQ 442
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN--EIRADGIEVSPTVWGALLGACRIHNN 522
Y + P+ HY C++DLLG GL EA ++N + DG+ +W +LL AC+IH N
Sbjct: 443 DYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGV-----IWCSLLKACKIHGN 497
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE-PGCSWI 581
+++GE ++++++EP N G Y++L+ +Y + G+ + +I + + G+KK+ PGCS I
Sbjct: 498 LELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSI 557
Query: 582 QINDGGHVFLSGDSSHPK 599
+I+ H F+ GD HP+
Sbjct: 558 EIDSVVHEFIIGDKLHPQ 575
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 221/494 (44%), Gaps = 72/494 (14%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------------P-------- 48
A ++F+ +P+ + + WN+M RG+ + +A+ L+ M P
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87
Query: 49 -------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
+ D++ + ++I+ Q+ ++ A++VFD RDVV++ ++
Sbjct: 88 SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV---- 145
I+GY G I+ A ++F +P+KDVVSWN +I A FKEM +V
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207
Query: 146 ASWTIMVNGLVREGRIVEARKLF----DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
++ +V+ + G I R++ D +++ N +I Y G V A +L +
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEG 267
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV--- 254
+ ++D+ SW LI G + A+ F++M + E T SI+ G +
Sbjct: 268 LSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 327
Query: 255 KEAHSYLEK----YPYSNIASW-TNVIVGYFEMGEVGSAIKVFELMT-TRDVTVWNVMIF 308
+ H Y++K +N +S T++I Y + G++ +A +V + R ++ WN MIF
Sbjct: 328 RWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIF 387
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
G + F +M+++G PD+ TF +L+ CS LDLGR I + R
Sbjct: 388 GFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNI----FRSMRQD 443
Query: 369 FTTVSN-----AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALE 422
+ MI + G + A +++P+ D + W S++ HG E E
Sbjct: 444 YNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELG-E 502
Query: 423 LFERMRLTDFKPDD 436
F + +L +P++
Sbjct: 503 SFAK-KLIKIEPEN 515
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 156/381 (40%), Gaps = 98/381 (25%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N R+++AQ +FD+ RD V++ +I GY G++++A +F+++P +D+ ++N +I+G
Sbjct: 122 QNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISG 181
Query: 62 LMQSDNVQGAKEVFDGMEV--------------------------RDVVTW--------- 86
++ N + A E+F M R V +W
Sbjct: 182 YAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSN 241
Query: 87 ----NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM-- 140
N++I Y G ++ A + G+ KDV+SWN +IG + A F+EM
Sbjct: 242 LKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 301
Query: 141 --------------------GARDVASW---------------------TIMVNGLVREG 159
GA D+ W T +++ + G
Sbjct: 302 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCG 361
Query: 160 RIVEARKLFDKMP-AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLI 214
I A ++ D + + WN MI G+ +G A D+F +M + D ++ L+
Sbjct: 362 DIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLL 421
Query: 215 NGLVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVKEAHSYLEKYPY-SN 268
+ +S +D + F+ M + T + +I +L +GL KEA + P +
Sbjct: 422 SACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPD 481
Query: 269 IASWTNV-----IVGYFEMGE 284
W ++ I G E+GE
Sbjct: 482 GVIWCSLLKACKIHGNLELGE 502
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 200/659 (30%), Positives = 323/659 (49%), Gaps = 84/659 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
I +A +FD +++ V WN M+ G +N + A+ +F M E D FTY +V+
Sbjct: 251 IGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGA 310
Query: 62 LMQSDN-----------------------------------VQGAKEVFDGMEVRDVVTW 86
D+ + AK +F+ + +D V+W
Sbjct: 311 CAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSW 370
Query: 87 NSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESY----FK 138
N+++ G N +EA+ + GM L D VS+ VI A N + + + K
Sbjct: 371 NALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMK 430
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+ A + +++ + G + RK+ ++ A + N++IAG + N A DL
Sbjct: 431 HSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDL 490
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
FQ++ L +GL S F + C +SII K+ H
Sbjct: 491 FQQV----------LRDGLKPSSFT------FSSILSGCTGLLSSIIG--------KQVH 526
Query: 259 SYLEKYPYSNIASWTNV-IVGYF---EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
Y K + N + V +VG + M E + + + E+ +++ W ++ G +N
Sbjct: 527 CYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKL-LIEMPDHKNLVEWTAIVSGYAQNG 585
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
+ L F +M+ PD TF S+L CS++ L G++IH IK + T ++
Sbjct: 586 YSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATS 645
Query: 375 AMITMYARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
A+I MY++CG+I S+ F + DI WNS+I G A +GYA++AL LF++M+ + K
Sbjct: 646 AIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIK 705
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
D++TF+GVL AC++AGL+ +GR+YFD M Y + PR HY C +DLLGR G + EA
Sbjct: 706 SDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQE 765
Query: 494 LLNEI--RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMY 551
++NE+ R DG+ +W L ACR+H + + GEIA + ++ELEP NS Y++L+ MY
Sbjct: 766 VINELPFRPDGV-----IWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNMY 820
Query: 552 LSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
+ G +AK M+E G K PGCSWI + + +FL D +H R+ +L+ L
Sbjct: 821 AAAGNWVEAKMAREAMREKGATKFPGCSWITVGNKTSLFLVQDKNHLGALRIYEMLDNL 879
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 149/609 (24%), Positives = 261/609 (42%), Gaps = 102/609 (16%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
R R+ +A+ +F + DTV W MI GY + G A+CLF +M + D T
Sbjct: 78 RCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVA 137
Query: 58 VIAGLMQSDNVQGAKEVFDGMEV-RDVVTWNSMISGYVCNGLIDEAL------------- 103
V+ L ++ A+ + M V WN++ISGY I+ +
Sbjct: 138 VVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLW 197
Query: 104 ----------------------RVFHGMPLKDVVSWNLVIG-ALVN----CQRMDLAESY 136
R H ++ + N+ +G +L+N C + A
Sbjct: 198 PTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILV 257
Query: 137 FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN------LMIAGYLDNG 190
F G ++V W M+NGLVR VEA ++F M ++A L +LD+
Sbjct: 258 FDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSH 317
Query: 191 CVGV---------------------------------AEDLFQKMHDRDLTSWKQLINGL 217
C+G A+ LF + +D SW L+ GL
Sbjct: 318 CLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGL 377
Query: 218 VNSRRIDAAISYFKQM------PETCEKTWNSIISVL--IRNGLV-KEAHSYLEKYPY-S 267
++ + AI K M P+ E ++ ++I+ IR K+ H K+ S
Sbjct: 378 THNEEDEEAIHMLKGMNLDGVTPD--EVSFATVINACSNIRATETGKQIHCLAMKHSICS 435
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
N A +++I Y + G+V S KV + + NV+I GL +N+ +E + F Q+
Sbjct: 436 NHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVL 495
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA-RNQFTTVSNAMITMYARCGNI 386
G P + TF+S+L+ C+ L + +G+Q+H +K N T+V +++ Y +
Sbjct: 496 RDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMP 555
Query: 387 QSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+ A +P H +++ W +I+ G A +GY+ ++L F RMR D PD++TF +L A
Sbjct: 556 EDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKA 615
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
CS + G+ + F ++A + ++D+ + G I + E+++ +
Sbjct: 616 CSEMTALSDGKEIHGLIIKSGFGSYKTA-TSAIIDMYSKCGDIISSFEAFKELKS---KQ 671
Query: 506 SPTVWGALL 514
T+W +++
Sbjct: 672 DITLWNSMI 680
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 232/521 (44%), Gaps = 61/521 (11%)
Query: 88 SMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM----GAR 143
++++ Y G + +A RVF G+ L D V W +I R A F M +
Sbjct: 71 ALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSP 130
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPA-KDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
D + +V L GR+ +AR L +MPA AWN +I+GY G+ ++F
Sbjct: 131 DRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQS--GIEHEVFGLY 188
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLE 262
+D+ W GL +R A++ T + + +R+GL
Sbjct: 189 --KDMRCW-----GLWPTRSTFASM-LSAAANATAFIEGRQVHAAAVRHGL--------- 231
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+N+ +++I Y + G +G AI VF+ ++V +WN M+ GL N+ E ++
Sbjct: 232 ---DANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQM 288
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F+ MK G D T+ SVL C+ L + LGRQ+ IK + V+NA + M+++
Sbjct: 289 FLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSK 348
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
G I A F+ + D +SWN+++ GL ++ E+A+ + + M L PD+++F V
Sbjct: 349 FGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATV 408
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI-------------- 488
++ACS + G+ C+ K+ + A + ++D + G +
Sbjct: 409 INACSNIRATETGK-QIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASS 467
Query: 489 -----------------DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
DEA++L ++ DG++ S + ++L C + +G+
Sbjct: 468 IVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHC 527
Query: 532 RVME--LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
++ +++ V + L YL EDA ++ +M ++
Sbjct: 528 YTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDH 568
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 99/246 (40%), Gaps = 8/246 (3%)
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G PD + L+ CS L L G+Q H A K + A++ MYARCG + A
Sbjct: 26 GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F + + D + W S+I G G ++A+ LF RM PD +T V V+ A +
Sbjct: 86 RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTAL 145
Query: 450 GLVDQGRYYFDCMKNKYFLQPRS--AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
G ++ R M P S A + + G+ E L ++R G+ +
Sbjct: 146 GRLEDARTLLHRMP-----APSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTR 200
Query: 508 TVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
+ + ++L A G ++ V N V L +Y CG DA +F
Sbjct: 201 STFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDC 260
Query: 567 MKENGV 572
E V
Sbjct: 261 SGEKNV 266
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 132/328 (40%), Gaps = 67/328 (20%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
++ ++ + + ++ V NV+I G +N D A+ LF Q+ + FT+++
Sbjct: 449 KHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSS 508
Query: 58 VI---------------------AGLMQSDNVQGAKEVFDGMEVR--------------- 81
++ +G + D G V ++ R
Sbjct: 509 ILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDH 568
Query: 82 -DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDLAESYFKE 139
++V W +++SGY NG ++L F M DV + +++ C M A S KE
Sbjct: 569 KNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMT-ALSDGKE 627
Query: 140 M---------GARDVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDN 189
+ G+ A+ I ++ + G I+ + + F ++ +K D+ WN MI G+ N
Sbjct: 628 IHGLIIKSGFGSYKTATSAI-IDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKN 686
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLI---------NGLVNSRR--IDAAISYFKQMPETCE 238
G A LFQKM D + S + GL++ R D+ + MP
Sbjct: 687 GYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRV-- 744
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPY 266
+ I +L R G ++EA + + P+
Sbjct: 745 DHYACFIDLLGRGGHLQEAQEVINELPF 772
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 254/448 (56%), Gaps = 12/448 (2%)
Query: 175 DVQAWNLMIAGYLDNGCVGV--AEDLFQKM-HDRDLTSWKQLINGLVNSRRIDAAISYFK 231
DV N +I Y G G+ A+ LF M RD+ SW +I+GL + A F
Sbjct: 152 DVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFD 211
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
+MPE +WN+++ ++ G + +A ++ P N+ SW+ +++GY + G++ A +
Sbjct: 212 EMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARML 271
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F+ M +++ W +++ G E L E + F QM+++ DN T S+L C++ L
Sbjct: 272 FDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLL 331
Query: 352 DLGRQIHAQAIKIARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
LG +IHA I N F T +SNA++ MYA+CG + A F+ + D++SWN+++
Sbjct: 332 GLGEKIHAS---IKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAML 388
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
GLA HG+ KALELF+RM+ F P+ +T +GVL AC++AGL+D G YF M+ Y L
Sbjct: 389 QGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTL 448
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
P HY C+VDLLGR G ++EA+ L IR + + +WG LLGACR+HN +++
Sbjct: 449 VPEVEHYGCMVDLLGRKGRLEEAIRL---IRNMPMAPNAIIWGTLLGACRMHNAVELARE 505
Query: 529 AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGH 588
+ ++ELEP +SG + +L+ +Y + G +M+ G KK G S I++N+ H
Sbjct: 506 VLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPSGASSIEVNNEVH 565
Query: 589 VFLSGDSSHPKFHRLRYLLNLLHTEIER 616
F D SHPK + ++N L E+++
Sbjct: 566 EFTVFDRSHPKSDNIYQVINGLRHELKQ 593
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 192/411 (46%), Gaps = 54/411 (13%)
Query: 51 DMFTYNTVIAGLMQ--SDNVQGAKEVFDGMEVR-DVVTWNSMISGYVCNGLIDEALRVFH 107
D+F N++I + S + AK++F M R DVV+WNSMISG GL +EA +VF
Sbjct: 152 DVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFD 211
Query: 108 GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
MP KD +SWN ++ V +MD A F EM R+V SW+ MV G + G + AR L
Sbjct: 212 EMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARML 271
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
FDKMP K++ +W ++++G+ + G AI
Sbjct: 272 FDKMPVKNLVSWTIIVSGFAEKGLA-------------------------------REAI 300
Query: 228 SYFKQMPETCEKTWN----SIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-Y 279
S F QM + C K N SI++ +GL+ ++ H+ ++ + +N +V Y
Sbjct: 301 SLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMY 360
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G + A VF + +DV WN M+ GL + G + L+ F +MKE G SP+ T
Sbjct: 361 AKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMI 420
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLEFS 394
VL C+ +D G + +T V M+ + R G ++ A+
Sbjct: 421 GVLCACTHAGLIDDG----IRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIR 476
Query: 395 SVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
++P+ + I W +++ H E A E+ + L + +P D +LS
Sbjct: 477 NMPMAPNAIIWGTLLGACRMHNAVELAREVLD--HLVELEPTDSGNFSMLS 525
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 156/295 (52%), Gaps = 21/295 (7%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSD 66
+EA+ +FD+MP++D ++WN M+ GY K G +D+A LF++MPER++ +++T++ G ++
Sbjct: 204 EEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAG 263
Query: 67 NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP---LK-DVVSWNLVIG 122
+++ A+ +FD M V+++V+W ++SG+ GL EA+ +F M LK D + ++
Sbjct: 264 DMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILA 323
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQA 178
A + L E + + T + N LV + GR+ A +F+ + KDV +
Sbjct: 324 ACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVS 383
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV----NSRRIDAAISYFKQM- 233
WN M+ G +G A +LF++M + + K + G++ ++ ID I YF M
Sbjct: 384 WNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTME 443
Query: 234 ------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
PE + + ++ +L R G ++EA + P + A ++G M
Sbjct: 444 RDYTLVPEV--EHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRM 496
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 186/386 (48%), Gaps = 24/386 (6%)
Query: 20 DTVTWNVMIRGYFKNGF--LDNAMCLFNQM-PERDMFTYNTVIAGLMQSDNVQGAKEVFD 76
D N +I Y K G + A LF M RD+ ++N++I+GL + + A++VFD
Sbjct: 152 DVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFD 211
Query: 77 GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESY 136
M +D ++WN+M+ GYV G +D+A ++F MP ++VVSW+ ++ M++A
Sbjct: 212 EMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARML 271
Query: 137 FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN----LMIAGYLDNGCV 192
F +M +++ SWTI+V+G +G EA LFD+M ++ N ++A ++G +
Sbjct: 272 FDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLL 331
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVN----SRRIDAAISYFKQMPETCEKTWNSIISVL 248
G+ E + + + + ++ N LV+ R++ A F + +WN+++ L
Sbjct: 332 GLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGL 391
Query: 249 IRNGLVKEAHSYLEKYP----YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
+G +A ++ N + V+ G + I+ F M V
Sbjct: 392 AMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPE 451
Query: 305 VMIFGLGENDLGEEG-LKFFVQMKESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
V +G + LG +G L+ +++ + P +P+ + ++L C ++L R++ +
Sbjct: 452 VEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHNAVELAREVLDHLV 511
Query: 363 KIA---RNQFTTVSNAMITMYARCGN 385
++ F+ +SN +YA G+
Sbjct: 512 ELEPTDSGNFSMLSN----IYAAAGD 533
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 124/250 (49%), Gaps = 21/250 (8%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
++ +A LFD+MP+R+ V+W+ M+ GY K G ++ A LF++MP +++ ++ +++G
Sbjct: 232 GKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFA 291
Query: 64 QSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+ + A +FD ME D T S+++ +GL+ ++ + +
Sbjct: 292 EKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTE 351
Query: 120 VIGALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
+ ALV+ C R+++A F ++ +DV SW M+ GL G V+A +LF +M +
Sbjct: 352 ISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEG 411
Query: 176 VQAWNLMIAGYLDNGCV--GVAED---LFQKMHDRDLT------SWKQLINGLVNSRRID 224
+ + G L C G+ +D F M +RD T + +++ L R++
Sbjct: 412 FSPNKVTMIGVL-CACTHAGLIDDGIRYFSTM-ERDYTLVPEVEHYGCMVDLLGRKGRLE 469
Query: 225 AAISYFKQMP 234
AI + MP
Sbjct: 470 EAIRLIRNMP 479
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 147/351 (41%), Gaps = 47/351 (13%)
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A F + +V ++N MI N + F M+ G DN TF +L +C+
Sbjct: 71 ATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTG 130
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN--IQSALLEFSSVPI-HDIISW 404
L + +HAQ K V N++I Y++CG+ I +A F S+ D++SW
Sbjct: 131 NVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSW 190
Query: 405 NSIICGLAYHGYAEKALELFERM-------------------------RLTDFKPDD--I 437
NS+I GLA G E+A ++F+ M +L D P+ +
Sbjct: 191 NSMISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVV 250
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
++ ++ AG ++ R FD M K + +T +V GL EA++L ++
Sbjct: 251 SWSTMVLGYCKAGDMEMARMLFDKMPVKNLVS-----WTIIVSGFAEKGLAREAISLFDQ 305
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN----SGVYLILTEMYLS 553
+ +++ ++L AC + +GE + + NN + + L +MY
Sbjct: 306 MEKACLKLDNGTVMSILAACAESGLLGLGEKIHASI---KNNNFKCTTEISNALVDMYAK 362
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
CGR A +F N +K + SW + G + G + F R++
Sbjct: 363 CGRLNIAYDVF-----NDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMK 408
>gi|326519006|dbj|BAJ92663.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 547
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 157/453 (34%), Positives = 246/453 (54%), Gaps = 6/453 (1%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDMFTYNTVIAGLMQ 64
+ + +FD P D V + +I + + G L A LF+ P R + ++ G +
Sbjct: 44 RSTRAVFDGTPHEDAVAYANLIDLHLRCGDLPRAEALFHAAPTAARGLRLDTAMLDGYFK 103
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
+ V A+ +FDGM V+ V W ++SGY +DEA R+F MP++DVVSW ++
Sbjct: 104 AGRVDHARRLFDGMPVKSVGAWTRVVSGYCRARRVDEARRLFDAMPVRDVVSWTAMLQGY 163
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
M A F M ARD SWT+M+ G R G + EAR++FD+MP ++V W +M+
Sbjct: 164 ARIGMMREARGLFDAMPARDFVSWTVMLQGYARRGMLREAREVFDQMPERNVVTWTVMVK 223
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI 244
Y D G A +LF KM R+L SW +I+G + + +D A+ F++MP+ +W ++
Sbjct: 224 AYADQGHFQEAMELFNKMPQRNLHSWNIMISGCLRAGNVDEAVRLFERMPDRNAVSWTTM 283
Query: 245 ISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
++ L +NG V A + + P + + A+W +I Y G++ A ++F+ + +D+ W
Sbjct: 284 VTGLAQNGRVSMAREFFDGMPENRDTAAWNAMITAYANDGQMNEAQRLFDSIPAKDLVSW 343
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
N +I G +N E + F+ M S SPD T SVL T+++G QIH A
Sbjct: 344 NAIIHGYAKNKHKGEVMGLFLLMLRSAVSPDRTTLISVLVTSES--TVEVG-QIHGLATT 400
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
T++ NA++TMY+R G++ SA F + D I+W S++ A HG A AL+
Sbjct: 401 RGLLSDTSLGNALLTMYSRSGDLHSAWQVFKMIQEKDPITWTSMMRAFANHGRASYALQA 460
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
F +M +KP TF+ LSACS+AGLVD+GR
Sbjct: 461 FAQMLQHGYKPSSTTFIAALSACSHAGLVDKGR 493
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 188/365 (51%), Gaps = 6/365 (1%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R R+ EA+ LFD MP RD V+W M++GY + G + A LF+ MP RD ++ ++ G
Sbjct: 134 RARRVDEARRLFDAMPVRDVVSWTAMLQGYARIGMMREARGLFDAMPARDFVSWTVMLQG 193
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ ++ A+EVFD M R+VVTW M+ Y G EA+ +F+ MP +++ SWN++I
Sbjct: 194 YARRGMLREAREVFDQMPERNVVTWTVMVKAYADQGHFQEAMELFNKMPQRNLHSWNIMI 253
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA-KDVQAWN 180
+ +D A F+ M R+ SWT MV GL + GR+ AR+ FD MP +D AWN
Sbjct: 254 SGCLRAGNVDEAVRLFERMPDRNAVSWTTMVTGLAQNGRVSMAREFFDGMPENRDTAAWN 313
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-EK 239
MI Y ++G + A+ LF + +DL SW +I+G ++ + F M +
Sbjct: 314 AMITAYANDGQMNEAQRLFDSIPAKDLVSWNAIIHGYAKNKHKGEVMGLFLLMLRSAVSP 373
Query: 240 TWNSIISVLIRNGL---VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELM 295
++ISVL+ + V + H + S N ++ Y G++ SA +VF+++
Sbjct: 374 DRTTLISVLVTSESTVEVGQIHGLATTRGLLSDTSLGNALLTMYSRSGDLHSAWQVFKMI 433
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+D W M+ + L+ F QM + G P + TF + L+ CS +D GR
Sbjct: 434 QEKDPITWTSMMRAFANHGRASYALQAFAQMLQHGYKPSSTTFIAALSACSHAGLVDKGR 493
Query: 356 QIHAQ 360
A
Sbjct: 494 ASRAH 498
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 177/655 (27%), Positives = 323/655 (49%), Gaps = 64/655 (9%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM 78
+D VT + ++ Y K LD+++ +F+++P ++ ++ +IAG +Q+D E+F M
Sbjct: 209 KDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEM 268
Query: 79 EVRDVVTWNSMISGYV--CNGLIDEALRV---FHGMPLK-----DVVSWNLVIGALVNCQ 128
+ + S+ + C GL AL+V H LK D+ + C
Sbjct: 269 QKVGIGVSQSIYASVFRSCAGL--SALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCG 326
Query: 129 RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD 188
+ A+ F + + + ++ G VR + EA + F + + + ++G
Sbjct: 327 SLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAF- 385
Query: 189 NGCVGVAEDL-FQKMHDRDLTSWKQLINGLVNS--------RRIDAAISYFKQMPETCEK 239
+ C + DL +++H + S + + NS + A F +M
Sbjct: 386 SACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAV 445
Query: 240 TWNSIISVLIRNGLVKEAHSYL----------EKYPYSNIASWTN--------------- 274
+WN++I+ +NG +E + +++ Y ++ +
Sbjct: 446 SWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRI 505
Query: 275 --------------VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+I Y + G + A K+ + + + + WN +I G E+
Sbjct: 506 IKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAH 565
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
FF +M + PDN T+ VL C++L ++ LG+QIH Q IK+ + +++ ++ MY
Sbjct: 566 SFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMY 625
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
++CGN+Q + L F P D ++WN++ICG A HG E+AL FERM+L + +P+ TFV
Sbjct: 626 SKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFV 685
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
+L AC++ G +D+G +YF+ M +Y L+P+ HY+C++D++GR G I EA+ L+ E+
Sbjct: 686 SILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMP- 744
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
E +W LL C+IH NI++ E A +++LEP +S ++L+ +Y G
Sbjct: 745 --FEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKV 802
Query: 561 KRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+ M+ N +KKEPGCSWI++ D H FL G+ +HP++ + +L++L E++
Sbjct: 803 SEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMK 857
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/512 (25%), Positives = 222/512 (43%), Gaps = 56/512 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + + A +F+KM QRD +++N MI GY G ++ A F P+RD+ ++N++++
Sbjct: 89 LRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLS 148
Query: 61 GLMQSDNVQGAKEVF-----------------------------------DGMEVR---- 81
G +Q+ + + +VF G+ VR
Sbjct: 149 GFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFY 208
Query: 82 -DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
DVVT ++++ Y +D++L++F +P+K+ V W+ +I V L FKEM
Sbjct: 209 KDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEM 268
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPA--------KDVQAWNLMIAGYLDNGCV 192
+ + + R + A K+ ++ A D+ + Y G +
Sbjct: 269 QKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSL 328
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVL 248
A+ +F + L + +I G V + + A+ +F+ + ++ E + + S
Sbjct: 329 ADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSAC 388
Query: 249 --IRNGL-VKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
I+ L ++ HS K SNI +++ Y + + A +F+ M RD WN
Sbjct: 389 ASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWN 448
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
+I +N EE L F M PD T+ SVL CS L+ G +IH + IK
Sbjct: 449 AVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKS 508
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+ V A+I MY +CG I+ A + ++SWN+II G ++E A F
Sbjct: 509 GLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFF 568
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
M KPD+ T+ VL AC+ V G+
Sbjct: 569 YEMLKMSVKPDNFTYAIVLDACANLASVGLGK 600
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 136/590 (23%), Positives = 262/590 (44%), Gaps = 69/590 (11%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D N +++ Y + L+ A +F +M +RD+ +YNT+I+G + + A E F
Sbjct: 77 DVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTP 136
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV--NCQRMD------ 131
RDVV+WNSM+SG++ NG +++ VF M + V ++ A+V C ++
Sbjct: 137 KRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGI 196
Query: 132 LAESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
MG +DV + + +++ + R+ ++ K+F ++P K+ W+ +IAG + N
Sbjct: 197 QVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQND 256
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
+ +LF++M + + + + S +A+ Q+
Sbjct: 257 EHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQL----------------- 299
Query: 251 NGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
H++ K + S+I T + Y + G + A ++F + + +N +I G
Sbjct: 300 -------HAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVG 352
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
N+ G E L+FF + +SG + + + + C+ + GRQ+H+ ++K
Sbjct: 353 CVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSN 412
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
V+N+++ MY +C + A F + D +SWN++I +G E+ L LF M
Sbjct: 413 ICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLR 472
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+PD T+ VL ACS ++ G + + K L S ++D+ + G+I+
Sbjct: 473 LRMEPDQFTYGSVLKACSSQQALNSGMEIHNRII-KSGLGLDSFVGGALIDMYCKCGMIE 531
Query: 490 EAMNLLNEIRAD-----------------------------GIEVSPT--VWGALLGACR 518
EA + + I + V P + +L AC
Sbjct: 532 EAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACA 591
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQ 566
++ +G+ ++++LE +S VY+ L +MY CG +D+ +F +
Sbjct: 592 NLASVGLGKQIHGQIIKLEL-HSDVYITSTLVDMYSKCGNMQDSALVFEK 640
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/527 (23%), Positives = 232/527 (44%), Gaps = 64/527 (12%)
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+ DV N ++ + C ++ A F++M RDV S+ M++G G + A + F
Sbjct: 75 IPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYD 134
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
P +DV +WN M++G+L NG + D+F M + + Q + F
Sbjct: 135 TPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQ---------------TTF 179
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYP-YSNIASWTNVIVGYFEMGEVGSAI 289
+ + C SVL GL + H + + Y ++ + + ++ Y + + ++
Sbjct: 180 AVVLKAC--------SVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSL 231
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
K+F + ++ W+ +I G +ND GL+ F +M++ G + + SV C+ L
Sbjct: 232 KIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLS 291
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
L +G Q+HA A+K TV A + MYA+CG++ A F+S+P H + +N+II
Sbjct: 292 ALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIV 351
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC-SYAGLVDQGRYYFDCMKNKYFL 468
G + +AL+ F+ + + ++I+ G SAC S G +D GR + K L
Sbjct: 352 GCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLD-GR-QLHSLSVKSTL 409
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEI-RADGI------------------------ 503
+ ++D+ G+ + EA + +E+ R D +
Sbjct: 410 RSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFAS 469
Query: 504 ------EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGR 556
E +G++L AC + G R+++ +S V L +MY CG
Sbjct: 470 MLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGM 529
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL 603
E+AK+I + ++++ SW I G + + +H F+ +
Sbjct: 530 IEEAKKI-----HDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEM 571
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 122/300 (40%), Gaps = 63/300 (21%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
TF+ ++ CSD +L G+Q HA+ I +SN ++ MY RC ++ A F +
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104
Query: 397 -------------------------------PIHDIISWNSIICGLAYHGYAEKALELFE 425
P D++SWNS++ G +G K++++F
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164
Query: 426 RM-RLTDFKPDDITFVGVLSACS----------YAGLVDQGRYYFDCMKN---------- 464
M R + D TF VL ACS GL+ + +Y D +
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKC 224
Query: 465 -------KYFLQPRSAHYTCVVDLLGRFGLIDE---AMNLLNEIRADGIEVSPTVWGALL 514
K F + ++ C ++ DE + L E++ GI VS +++ ++
Sbjct: 225 KRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVF 284
Query: 515 GACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
+C + +KVG ++ + ++ V +MY CG DA+RIF + ++ ++
Sbjct: 285 RSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQ 344
>gi|119638460|gb|ABL85051.1| hypothetical protein 57h21.26 [Brachypodium sylvaticum]
Length = 753
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 179/638 (28%), Positives = 316/638 (49%), Gaps = 78/638 (12%)
Query: 19 RDTVTWNV-----MIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKE 73
R T NV ++ Y G +D +F+ + ++ +N +++GL+ + V A+
Sbjct: 119 RSCSTGNVFVGASLVTMYASCGVVDCLERVFDDVDSPNVALWNALVSGLVMNHRVGDARR 178
Query: 74 VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLA 133
VF+ M R+VV+W +M+ G+V + +A+ +F+ MP+K+ VSW ++IG LV+CQ+ A
Sbjct: 179 VFNRMPARNVVSWTAMVKGHVSVHDVGQAVELFNLMPVKNSVSWCVMIGGLVHCQQFREA 238
Query: 134 ESYFKEM--------------------------GARDVASWTI---MVNGLVREGRIV-- 162
F + G R + +++ V+ L+ E +V
Sbjct: 239 VELFNSLMRNGDEVTNVILVKVVNAYAGLKSIGGGRCIHGFSVKSGFVHDLIIEASLVAM 298
Query: 163 --------EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLI 214
EAR FDKM K V +WN +I GY+ + AE++F+ M RD SW +I
Sbjct: 299 YCNSLDIDEARLEFDKMDRKQVGSWNAIIRGYIYAEKIDEAENIFESMTYRDKVSWNSMI 358
Query: 215 NGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTN 274
NG + RI A + +MPE + +++S I NG + +A P ++ S T
Sbjct: 359 NGYIRDGRIADATELYSKMPEKNVEAATALMSWFIDNGKLGKARDMFYSLPQVDVMSCTA 418
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI--------------------------- 307
++ GY + G + A+ +F M R +NVMI
Sbjct: 419 LLFGYMKEGYLDDALDLFHRMHKRTAVTYNVMIAGFLHQGKVAEAYKLFNESPAHDATTC 478
Query: 308 ----FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
GL +N L + LK + +M S + +S+++ CS + G Q+HA IK
Sbjct: 479 SCFVTGLAQNGLIHDALKLYKKMLVSNMHTSESVVSSLISCCSHHSMIVHGLQLHATTIK 538
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
+ + + N++I++Y++CG + +A F + D+++WN++I G A++ + A+E+
Sbjct: 539 LGFELYLIIQNSLISLYSKCGEMVAAQNIFDQMVKRDVVTWNTLIHGYAFNSLGQNAIEM 598
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
F+ M++ PD+ITF+GVLSAC++ L+++ +++FD M Y + P HY C+VDLL
Sbjct: 599 FKNMKIAQVDPDEITFLGVLSACNHMSLLEEAKHFFDVMTCDYGIAPNMMHYACMVDLLC 658
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGV 543
R G+++EA L+ + E +W +LL +CR+ + K+ E A +++ + P
Sbjct: 659 RRGMVEEAEGLMKSMP---FEPDSAIWTSLLSSCRLSGSDKLAEHAASQLIAINPCTKMP 715
Query: 544 YLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
YL L ++ S + + +Q+ + +KE G SWI
Sbjct: 716 YLHLINVHGSMDKWAVIDSLRSQITRSTTEKEVGYSWI 753
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 218/504 (43%), Gaps = 70/504 (13%)
Query: 22 VTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
V+ N ++ + + G D A +F+ MP RD+ ++N+ ++ +S GA +F + R
Sbjct: 26 VSGNRLMGAHLRAGRPDAAREVFDGMPRRDVVSWNSAMSAHARSGAHAGAAGLFLELRRR 85
Query: 82 DVVTWNSMISGYVCNGLIDEAL---RVFHGMPLKDVVSWNLVIGA-----LVNCQRMDLA 133
V + +S + EAL R HG+ L+ + N+ +GA +C +D
Sbjct: 86 GVRPDGTSLSTVLSACARLEALELGRCVHGLALRSCSTGNVFVGASLVTMYASCGVVDCL 145
Query: 134 ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
E F ++ + +VA W +V+GLV R+ +AR++F++MPA++V +W M+ G++ VG
Sbjct: 146 ERVFDDVDSPNVALWNALVSGLVMNHRVGDARRVFNRMPARNVVSWTAMVKGHVSVHDVG 205
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL----- 248
A +LF M ++ SW +I GLV+ ++ A+ F + ++ N I+ +
Sbjct: 206 QAVELFNLMPVKNSVSWCVMIGGLVHCQQFREAVELFNSLMRNGDEVTNVILVKVVNAYA 265
Query: 249 ---------------IRNGLVK-------------------EAHSYLEKYPYSNIASWTN 274
+++G V EA +K + SW
Sbjct: 266 GLKSIGGGRCIHGFSVKSGFVHDLIIEASLVAMYCNSLDIDEARLEFDKMDRKQVGSWNA 325
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP- 333
+I GY ++ A +FE MT RD WN MI G + + + + +M E
Sbjct: 326 IIRGYIYAEKIDEAENIFESMTYRDKVSWNSMINGYIRDGRIADATELYSKMPEKNVEAA 385
Query: 334 --------DNATFTSVLTICSDLPTLDL-------------GRQIHAQAIKIARNQFTTV 372
DN + LP +D+ G A + ++ T V
Sbjct: 386 TALMSWFIDNGKLGKARDMFYSLPQVDVMSCTALLFGYMKEGYLDDALDLFHRMHKRTAV 445
Query: 373 S-NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
+ N MI + G + A F+ P HD + + + GLA +G AL+L+++M +++
Sbjct: 446 TYNVMIAGFLHQGKVAEAYKLFNESPAHDATTCSCFVTGLAQNGLIHDALKLYKKMLVSN 505
Query: 432 FKPDDITFVGVLSACSYAGLVDQG 455
+ ++S CS+ ++ G
Sbjct: 506 MHTSESVVSSLISCCSHHSMIVHG 529
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 142/326 (43%), Gaps = 8/326 (2%)
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
VVS N ++GA + R D A F M RDV SW ++ R G A LF ++
Sbjct: 25 VVSGNRLMGAHLRAGRPDAAREVFDGMPRRDVVSWNSAMSAHARSGAHAGAAGLFLELRR 84
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK--------QLINGLVNSRRIDA 225
+ V+ ++ L A +L + +H L S L+ + +D
Sbjct: 85 RGVRPDGTSLSTVLSACARLEALELGRCVHGLALRSCSTGNVFVGASLVTMYASCGVVDC 144
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEV 285
F + WN+++S L+ N V +A + P N+ SWT ++ G+ + +V
Sbjct: 145 LERVFDDVDSPNVALWNALVSGLVMNHRVGDARRVFNRMPARNVVSWTAMVKGHVSVHDV 204
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
G A+++F LM ++ W VMI GL E ++ F + +G N V+
Sbjct: 205 GQAVELFNLMPVKNSVSWCVMIGGLVHCQQFREAVELFNSLMRNGDEVTNVILVKVVNAY 264
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
+ L ++ GR IH ++K + +++ MY +I A LEF + + SWN
Sbjct: 265 AGLKSIGGGRCIHGFSVKSGFVHDLIIEASLVAMYCNSLDIDEARLEFDKMDRKQVGSWN 324
Query: 406 SIICGLAYHGYAEKALELFERMRLTD 431
+II G Y ++A +FE M D
Sbjct: 325 AIIRGYIYAEKIDEAENIFESMTYRD 350
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 155/354 (43%), Gaps = 84/354 (23%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--------------- 49
+I EA+N+F+ M RD V+WN MI GY ++G + +A L+++MPE
Sbjct: 335 KIDEAENIFESMTYRDKVSWNSMINGYIRDGRIADATELYSKMPEKNVEAATALMSWFID 394
Query: 50 -------RDMF---------TYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGY 93
RDMF + ++ G M+ + A ++F M R VT+N MI+G+
Sbjct: 395 NGKLGKARDMFYSLPQVDVMSCTALLFGYMKEGYLDDALDLFHRMHKRTAVTYNVMIAGF 454
Query: 94 VCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVN 153
+ G + EA ++F+ P D + + + L + A +K+M ++ + +V+
Sbjct: 455 LHQGKVAEAYKLFNESPAHDATTCSCFVTGLAQNGLIHDALKLYKKMLVSNMHTSESVVS 514
Query: 154 GLV---------------------------------------REGRIVEARKLFDKMPAK 174
L+ + G +V A+ +FD+M +
Sbjct: 515 SLISCCSHHSMIVHGLQLHATTIKLGFELYLIIQNSLISLYSKCGEMVAAQNIFDQMVKR 574
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYF 230
DV WN +I GY N A ++F+ M D D ++ +++ + ++ A +F
Sbjct: 575 DVVTWNTLIHGYAFNSLGQNAIEMFKNMKIAQVDPDEITFLGVLSACNHMSLLEEAKHFF 634
Query: 231 KQMPETCE-------KTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVI 276
M TC+ + ++ +L R G+V+EA ++ P+ + A WT+++
Sbjct: 635 DVM--TCDYGIAPNMMHYACMVDLLCRRGMVEEAEGLMKSMPFEPDSAIWTSLL 686
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
N ++ + R G +A F +P D++SWNS + A G A LF +R +
Sbjct: 29 NRLMGAHLRAGRPDAAREVFDGMPRRDVVSWNSAMSAHARSGAHAGAAGLFLELRRRGVR 88
Query: 434 PDDITFVGVLSACSYAGLVDQGR 456
PD + VLSAC+ ++ GR
Sbjct: 89 PDGTSLSTVLSACARLEALELGR 111
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 203/640 (31%), Positives = 321/640 (50%), Gaps = 48/640 (7%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------------DMFTY 55
+A+N+F++M R+ V+ N ++ G K + A +F++M + F+
Sbjct: 808 DAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSE 867
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+V+ + A + G+ V N +++ Y +G I +A VF M KD V
Sbjct: 868 FSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSV 927
Query: 116 SWNLVIGAL-VNCQRMDLAESYFKEMGARDVASWTIMVN--------GLVREGRIVEARK 166
SWN +I L N D AES+ + + S +++ G + G +
Sbjct: 928 SWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDG 987
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR-RIDA 225
L + DV N ++A Y + GC +F M + D SW +I L +S +
Sbjct: 988 LKLGLDT-DVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQ 1046
Query: 226 AISYFKQMPETCEKTWN----------SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNV 275
A+ YF +M W S +S L + + + H+ + KY S+ + N
Sbjct: 1047 AVKYFLEM---MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNA 1103
Query: 276 IVG-YFEMGEVGSAIKVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++ Y + GE+ K+F M+ TRD WN MI G N+L + + M + G
Sbjct: 1104 LLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRL 1163
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D+ TF +VL+ C+ + TL+ G ++HA I+ V +A++ MY++CG I A F
Sbjct: 1164 DSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFF 1223
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT-FVGVLSACSYAGLV 452
+P+ ++ SWNS+I G A HG+ EKAL+LF RM L PD + +GVLSACS+ G V
Sbjct: 1224 ELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFV 1283
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
++G +F M Y L PR H++C+VDLLGR G +DE + +N + ++ + +W
Sbjct: 1284 EEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSM---PMKPNVLIWRT 1340
Query: 513 LLGACRIHN--NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
+LGAC N N ++G A E ++ELEP N+ Y++L MY S + ED + MKE
Sbjct: 1341 VLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEA 1400
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPK----FHRLRYL 606
VKKE GCSW+ + DG HVF++GD HP+ + +LR L
Sbjct: 1401 AVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLREL 1440
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 158/641 (24%), Positives = 273/641 (42%), Gaps = 78/641 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + AQ LFD+M R+ VTW +I GY +NG D A F M +
Sbjct: 590 VRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFG 649
Query: 61 GLMQSDNVQGAKEVFDGMEVR----------DVVTWNSMISGY-VCNGLIDEALRVFHGM 109
+++ G G+++ DVV N +IS Y C ++A VF +
Sbjct: 650 SALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRI 709
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESY--FKEMGARDVASWTIMVNGLVREGRIVEARK- 166
+++ +SWN +I V +R D +Y F M ++ ++ N I A
Sbjct: 710 GIRNSISWNSIIS--VYSRRGDXVSAYDLFSSM-QKEGLGFSFKPNEYTFGSLITAACSS 766
Query: 167 ------LFDKMPAK--------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
+ ++M A+ D+ + +++G+ G A+++F++M R++ S
Sbjct: 767 VDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNG 826
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI------------RNGLVKEAHSY 260
L+ GLV ++ +AA F +M + +S + +L R G AH
Sbjct: 827 LMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVI 886
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+ +A ++ Y + G + A VFELM +D WN +I GL +N+ E+
Sbjct: 887 RTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAA 946
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
+ F++M+ +G P N T S L+ C+ L + LG QIH +K+ + +VSNA++ +Y
Sbjct: 947 ESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALY 1006
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLA-YHGYAEKALELFERMRLTDFKPDDITF 439
A G L FS +P +D +SWNS+I L+ +A++ F M + +TF
Sbjct: 1007 AETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTF 1066
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG------------- 486
+ +LSA S L + + + KY L +A ++ G+ G
Sbjct: 1067 INILSAVSSLSL-HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMS 1125
Query: 487 -------------------LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG- 526
L+ +AM+L+ + G + + +L AC ++ G
Sbjct: 1126 ETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGM 1185
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
E+ + ++ V L +MY CGR + A R F M
Sbjct: 1186 EVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELM 1226
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 204/436 (46%), Gaps = 29/436 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYN-TVIA 60
++ I +A ++F+ M ++D+V+WN +I G +N ++A F +M N T+I+
Sbjct: 907 KSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLIS 966
Query: 61 GLMQSDNVQ----GAKEVFDGMEV---RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
L ++ G + DG+++ DV N++++ Y G E L+VF MP D
Sbjct: 967 TLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYD 1026
Query: 114 VVSWNLVIGALVNCQ-RMDLAESYFKEM--GARDVASWT-IMVNGLVREGRIVEARKLFD 169
VSWN VIGAL + + + A YF EM G ++ T I + V + E
Sbjct: 1027 QVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIH 1086
Query: 170 KMPAK-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHD-RDLTSWKQLINGLVNSRRI 223
+ K D N +++ Y G + E +F +M + RD SW +I+G +++ +
Sbjct: 1087 ALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELL 1146
Query: 224 DAAISYFKQMPETCEK----TWNSIISVLIRNGLVK---EAHSY-LEKYPYSNIASWTNV 275
A+ M + ++ T+ +++S ++ E H+ + S++ + +
Sbjct: 1147 HKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSAL 1206
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ Y + G + A + FELM R+V WN MI G + GE+ LK F +M G PD+
Sbjct: 1207 VDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDH 1266
Query: 336 -ATFTSVLTICSDLPTLDLGRQIHAQAIKIAR-NQFTTVSNAMITMYARCGNIQSALLEF 393
A VL+ CS + ++ G + ++ R + + M+ + R G +
Sbjct: 1267 VAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFI 1326
Query: 394 SSVPIH-DIISWNSII 408
+S+P+ +++ W +++
Sbjct: 1327 NSMPMKPNVLIWRTVL 1342
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 146/325 (44%), Gaps = 27/325 (8%)
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+E H KY + +N ++ Y +G++GSA K+F+ M+ R++ W +I G +
Sbjct: 563 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 622
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC--SDLPTLDLGRQIHAQAIKIARNQFT 370
N +E F M +G P++ F S L C S LG QIH K
Sbjct: 623 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 682
Query: 371 TVSNAMITMYARC-GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
V N +I+MY C + A F + I + ISWNSII + G A +LF M+
Sbjct: 683 VVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQK 742
Query: 430 T----DFKPDDITFVGVLS-ACSYAGLVDQGRYYFDCM----KNKYFLQPRSAHYTCVVD 480
FKP++ TF +++ ACS VD G + M + FLQ + +V
Sbjct: 743 EGLGFSFKPNEYTFGSLITAACSS---VDFGLCVLEQMLARVEKSGFLQDLYVG-SALVS 798
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP-- 538
RFGL D+A N+ ++ G+ ++ G ++G + K GE A + E++
Sbjct: 799 GFARFGLTDDAKNIFEQM---GVRNVVSMNGLMVGLVK----QKQGEAAAKVFHEMKDLV 851
Query: 539 -NNSGVYLILTEMYLSCGRREDAKR 562
NS Y++L + E+ +R
Sbjct: 852 GINSDSYVVLLSAFSEFSVLEEGRR 876
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
TF S++ + R++H Q+IK +SN +I +Y R G++ SA F +
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
++++W +I G +G ++A F M F P+ F L AC +G
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 659
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 15/133 (11%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTV 58
RI A F+ MP R+ +WN MI GY ++G + A+ LF +M P + V
Sbjct: 1214 GRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGV 1273
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPL 111
++ V+ E F M +V + + + C G +DE + MP+
Sbjct: 1274 LSACSHVGFVEEGFEHFKSMS--EVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPM 1331
Query: 112 K-DVVSWNLVIGA 123
K +V+ W V+GA
Sbjct: 1332 KPNVLIWRTVLGA 1344
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 166/462 (35%), Positives = 275/462 (59%), Gaps = 33/462 (7%)
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+++N V+ + +A +LFD+MP ++V +W MI+ Y + C K+H + L
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAY--SKC---------KIHQKAL-- 147
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV-LIRNGLVKEAHSYLEKYPYSN 268
+ L+ L ++ R + + + + +C N + V ++ G++KE LE S+
Sbjct: 148 -ELLVLMLRDNVRPN--VYTYSSVLRSC----NGMSDVRMLHCGIIKEG---LE----SD 193
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ + +I + ++GE A+ VF+ M T D VWN +I G +N + L+ F +MK
Sbjct: 194 VFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKR 253
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
+G + AT TSVL C+ L L+LG Q H +K +Q ++NA++ MY +CG+++
Sbjct: 254 AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLED 311
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
AL F+ + D+I+W+++I GLA +GY+++AL+LFERM+ + KP+ IT VGVL ACS+
Sbjct: 312 ALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSH 371
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
AGL++ G YYF MK Y + P HY C++DLLG+ G +D+A+ LLNE+ E
Sbjct: 372 AGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMEC---EPDAV 428
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
W LLGACR+ N+ + E A ++V+ L+P ++G Y +L+ +Y + + + + I +M+
Sbjct: 429 TWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMR 488
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
+ G+KKEPGCSWI++N H F+ GD+SHP+ + LN L
Sbjct: 489 DRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQL 530
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 142/324 (43%), Gaps = 23/324 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
+ +A LFD+MPQR+ ++W MI Y K A+ L M +++TY++V+
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 62 LMQSDNVQ--GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+V+ + +G+E DV +++I + G ++AL VF M D + WN
Sbjct: 172 CNGMSDVRMLHCGIIKEGLE-SDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 230
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA------ 173
+IG R D+A FK M + + ++R + +L +
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD 290
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
+D+ N ++ Y G + A +F +M +RD+ +W +I+GL + A+ F++M
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350
Query: 234 PETCEK-TWNSIISVLI---RNGLVKEAHSYLEK----YPYSNIASWTNVIVGYF-EMGE 284
+ K + +I+ VL GL+++ Y Y + ++ + G+
Sbjct: 351 KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGK 410
Query: 285 VGSAIKVF-ELMTTRDVTVWNVMI 307
+ A+K+ E+ D W ++
Sbjct: 411 LDDAVKLLNEMECEPDAVTWRTLL 434
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 157/384 (40%), Gaps = 64/384 (16%)
Query: 20 DTVTWNVMIRGYFKNGFLD--NAMC--LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF 75
D+ T++ +I+ N + N +C L+ MF N +I ++ + + A ++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI--GALVNCQRMD-- 131
D M R+V++W +MIS Y + +AL + M L+D V N+ L +C M
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLM-LRDNVRPNVYTYSSVLRSCNGMSDV 178
Query: 132 --LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
L KE DV + +++ + G +A +FD+M D WN +I G+ N
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238
Query: 190 GCVGVAEDLFQKM-------------------------------------HDRDLTSWKQ 212
VA +LF++M +D+DL
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNA 298
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW 272
L++ ++ A+ F QM E TW+++IS L +NG +EA E+ S
Sbjct: 299 LVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 358
Query: 273 TNVIVG-YFEMGEVG----------SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
IVG F G S K++ + R+ + MI LG+ ++ +K
Sbjct: 359 YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE--HYGCMIDLLGKAGKLDDAVK 416
Query: 322 FFVQMKESGPSPDNATFTSVLTIC 345
+M+ PD T+ ++L C
Sbjct: 417 LLNEME---CEPDAVTWRTLLGAC 437
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 118/269 (43%), Gaps = 50/269 (18%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------------ 48
++A ++FD+M D + WN +I G+ +N D A+ LF +M
Sbjct: 211 EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC 270
Query: 49 -------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
++D+ N ++ + +++ A VF+ M+ RDV+TW++M
Sbjct: 271 TGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMDLAES---YFKEM----G 141
ISG NG EAL++F M ++ ++G L C L E YF+ M G
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 142 ARDV-ASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGVAEDLF 199
V + M++ L + G++ +A KL ++M + D W ++ + +AE
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450
Query: 200 QK---MHDRDLTSWKQLINGLVNSRRIDA 225
+K + D ++ L N NS++ D+
Sbjct: 451 KKVIALDPEDAGTYTLLSNIYANSQKWDS 479
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 30/266 (11%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM 78
+D + N ++ Y K G L++A+ +FNQM ERD+ T++T+I+GL Q+ Q A ++F+ M
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350
Query: 79 EVRDVVTWNSMISG--YVCN--GLIDEALRVFHGM-------PLKDVVSWNLVIGALVNC 127
+ I G + C+ GL+++ F M P+++ + +I L
Sbjct: 351 KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE--HYGCMIDLLGKA 408
Query: 128 QRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPA---KDVQAWNLMI 183
++D A EM D +W ++ + +V A K+ A +D + L+
Sbjct: 409 GKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLS 468
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDL-----TSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
Y ++ E++ +M DR + SW ++ +++I A I P+ E
Sbjct: 469 NIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV------NKQIHAFIIGDNSHPQIVE 522
Query: 239 --KTWNSIISVLIRNGLVKEAHSYLE 262
K N +I L G V E + L+
Sbjct: 523 VSKKLNQLIHRLTGIGYVPETNFVLQ 548
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 84/163 (51%), Gaps = 17/163 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMF-TYNTVI----- 59
+++A +F++M +RD +TW+ MI G +NG+ A+ LF +M Y T++
Sbjct: 309 LEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 368
Query: 60 ---AGLMQSD--NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-D 113
AGL++ + K+++ VR+ + MI G +D+A+++ + M + D
Sbjct: 369 CSHAGLLEDGWYYFRSMKKLYGIDPVRE--HYGCMIDLLGKAGKLDDAVKLLNEMECEPD 426
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGA---RDVASWTIMVN 153
V+W ++GA + M LAE K++ A D ++T++ N
Sbjct: 427 AVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSN 469
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 315/607 (51%), Gaps = 46/607 (7%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N I Y K G L A F + + ++F++N +IA + A ++FD + D+V
Sbjct: 47 NHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLV 106
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN--CQRMDLAESYFKEMGA 142
++N++IS Y G AL +F GM + + A++ C + L +
Sbjct: 107 SYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVS 166
Query: 143 RDVASWTIMVNGLV----REGRIVEARKLFDKMPA-KDVQAWNLMIAGYLDNGCVGVAED 197
S+ + N L+ + G + +A+++F M +D +WN MI Y + A
Sbjct: 167 SGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALG 226
Query: 198 LFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
LFQ+M R D+ + ++ + + + Q LI+ G
Sbjct: 227 LFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQ---------------LIKTGF 271
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGE-VGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+ +H + +I Y + G + KVFE +T D+ +WN M+ G +
Sbjct: 272 HQNSHV------------GSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQ 319
Query: 313 ND-LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQF 369
N+ E+ L+ F QM+ G P++ +F V++ CS+L + G+QIH+ A+K I N+
Sbjct: 320 NEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRI 379
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
+ V NA+I MY++CGN+Q A F + H+ +S NS+I G A HG ++L LF+ M
Sbjct: 380 S-VDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLE 438
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
P ITF+ VLSAC++ G V++G YF+ MK K+ ++P + HY+C++DLLGR G +
Sbjct: 439 RQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLS 498
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
EA NL+ + + + W +LLGACR H NI++ A +V++LEP+N+ Y++L+
Sbjct: 499 EAENLIARMPFNPGSIG---WASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSN 555
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNL 609
MY S GR E+ + M++ GVKK+PGCSWI++ HVF++ DSSHP + L
Sbjct: 556 MYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEE 615
Query: 610 LHTEIER 616
+ +++R
Sbjct: 616 MSGKMKR 622
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 200/486 (41%), Gaps = 71/486 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ R+ A+ F + + ++N +I Y K A LF+Q+PE D+ +YNT+I+
Sbjct: 55 KCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISA 114
Query: 62 LMQSDNVQGAKEVF----------DGMEVRDVVTW------------------------- 86
A +F DG + V+T
Sbjct: 115 YADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVS 174
Query: 87 --NSMISGYVCNGLIDEALRVFHGM-PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
N++++ Y NG +D+A RVF+GM ++D VSWN +I A Q A F+EM R
Sbjct: 175 VNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRR 234
Query: 144 ----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD--NGCVGVAED 197
D+ + ++ + + ++ + + +G +D + C G D
Sbjct: 235 GLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSD 294
Query: 198 ---LFQKMHDRDLTSWKQLINGLV-NSRRIDAAISYFKQM------PETCEKTWNSIISV 247
+F+++ + DL W +++G N ++ A+ F+QM P C ++ +IS
Sbjct: 295 CRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDC--SFVCVISA 352
Query: 248 ---LIRNGLVKEAHSYLEK--YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
L K+ HS K P + I+ +I Y + G + A ++F+ M +
Sbjct: 353 CSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVS 412
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
N MI G ++ + E L F M E +P + TF SVL+ C+ ++ G
Sbjct: 413 LNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNY----F 468
Query: 363 KIARNQFTTVSNA-----MITMYARCGNIQSALLEFSSVPIHD-IISWNSIICGLAYHGY 416
+ + +F A MI + R G + A + +P + I W S++ HG
Sbjct: 469 NMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGN 528
Query: 417 AEKALE 422
E A++
Sbjct: 529 IELAVK 534
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAG 61
+Q+A+ LFD+M + +TV+ N MI GY ++G ++ LF M ER + T+ +V++
Sbjct: 395 LQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSA 454
Query: 62 LMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD-VV 115
+ V+ F+ M+ + + ++ MI G + EA + MP +
Sbjct: 455 CAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSI 514
Query: 116 SWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVREGR 160
W ++GA ++L A + ++ + A + ++ N GR
Sbjct: 515 GWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGR 562
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 96/243 (39%), Gaps = 45/243 (18%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F +L C L G+ +H+ IK T SN I +Y++CG + A F +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
++ S+N+II A A +LF+++ +PD +++ ++SA
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIP----EPDLVSYNTLISA------------ 114
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
Y DC G A+ L + +R G+++ A++ AC
Sbjct: 115 YADC------------------------GETAPALGLFSGMREMGLDMDGFTLSAVITAC 150
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
+ +G++ V + V L Y G +DAKR+F M G++ E
Sbjct: 151 CDDVGL-IGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGM--GGIRDE-- 205
Query: 578 CSW 580
SW
Sbjct: 206 VSW 208
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 188/543 (34%), Positives = 287/543 (52%), Gaps = 27/543 (4%)
Query: 86 WNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAESYFK--- 138
WN++I + EA +F+ M D S++LV+ A C R+ L + +
Sbjct: 90 WNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKA---CSRLGLIKEGMQIHG 146
Query: 139 EMGARDVASWTIMVNGL----VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+G ++ S + N L +R G + AR+LFD+M +D ++N MI GY+ +G V
Sbjct: 147 LLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKS 206
Query: 195 AEDLFQ--KMHDRDLTSWKQLINGLVNSRR-IDAAISYFKQMPETCEKTWNSIISVLIRN 251
A +LF M ++L SW +I+G S + A F++MP+ +WNS+I ++
Sbjct: 207 ARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKC 266
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
G ++ AH + P ++ SW N++ GY ++GE+ A +F+ M RDV N M+ G
Sbjct: 267 GKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYV 326
Query: 312 ENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+N E L FF M PDNAT L+ + L D G +H I N F+
Sbjct: 327 QNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCY---IEDNGFS 383
Query: 371 ---TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
+ A+I MYA+CG+I +AL F + I WN+II GLA HG E A ELF M
Sbjct: 384 LSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEM 443
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
KPDDITF+GVL+AC++AGLV +G F+ M+ + ++P+ HY C+VD+LGR G
Sbjct: 444 EKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGH 503
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLIL 547
++EA + ++ IE + VW LL ACR H N +GE + ++ ++ N Y++L
Sbjct: 504 VEEAKKFVEKM---PIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLL 560
Query: 548 TEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
+ +Y G D RI MK+ +KK PGCS I++ H F D SHP+ + +L
Sbjct: 561 SNIYAGFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQVREIYSML 620
Query: 608 NLL 610
+ L
Sbjct: 621 DSL 623
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 195/385 (50%), Gaps = 28/385 (7%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D+F N ++ ++ + A+++FD M RD V++NSMI GYV +G++ A +F MP
Sbjct: 156 DVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMP 215
Query: 111 L--KDVVSWNLVIGALVNCQR-MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
+ K+++SWN +I + + +A F+EM RD+ SW M++G V+ G++ A L
Sbjct: 216 MEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHL 275
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
F++MP +DV +W M+ GY G + +A LF +M +RD+ S ++ G V + + A+
Sbjct: 276 FNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEAL 335
Query: 228 SYFKQMPETCE-----KTWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG- 278
++F M E T +S + + G E H Y+E +S ++
Sbjct: 336 NFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDM 395
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G + +A+ VFE + + + WN +I GL + LGE + F++M++ PD+ TF
Sbjct: 396 YAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITF 455
Query: 339 TSVLTICSD-------LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
VL C+ L +L R++H K+ M+ + R G+++ A
Sbjct: 456 IGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQH------YGCMVDILGRAGHVEEAKK 509
Query: 392 EFSSVPI--HDIISWNSIICGLAYH 414
+PI +D++ W +++ H
Sbjct: 510 FVEKMPIEPNDVV-WRTLLSACRNH 533
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 190/382 (49%), Gaps = 34/382 (8%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDMFTYNTVIAGLMQSD 66
A+ LFD+M +RD+V++N MI GY K+G + +A LF+ MP ++++ ++N++I+G +S+
Sbjct: 176 ARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSE 235
Query: 67 N-VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
++ A E+F+ M RD+++WNSMI G V G ++ A +F+ MP +DVVSW ++
Sbjct: 236 EGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYA 295
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF-DKMPAKDVQAWN--LM 182
+D+A F EM RDV S M+ G V+ G ++EA F D + K++ N L+
Sbjct: 296 KLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLL 355
Query: 183 IA-------GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN----SRRIDAAISYFK 231
I G+ D G L + D + ++L L++ ID A+S F+
Sbjct: 356 ITLSAIAQLGHFDEGVA-----LHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFE 410
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSY---LEK-YPYSNIASWTNVIVGYFEMGEVGS 287
+ + WN+II L +GL + A +EK + + ++ V+ G V
Sbjct: 411 DIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKE 470
Query: 288 AIKVFELM-----TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
+ FELM + + M+ LG EE KF +M P++ + ++L
Sbjct: 471 GLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMP---IEPNDVVWRTLL 527
Query: 343 TICSDLPTLDLGRQIHAQAIKI 364
+ C + +G + I +
Sbjct: 528 SACRNHENFTIGEPVAKHLISV 549
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 140/278 (50%), Gaps = 18/278 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ A LF++MP+RD ++WN MI G K G ++NA LFNQMP+RD+ ++ ++ G +
Sbjct: 238 LRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKL 297
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-----PLKDVVSWNLV 120
+ A+ +FD M RDV++ N+M++GYV NG + EAL FH M D + +
Sbjct: 298 GEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLIT 357
Query: 121 IGALVNCQRMDLA---ESYFKEMGARDVASWTI-MVNGLVREGRIVEARKLFDKMPAKDV 176
+ A+ D Y ++ G + +++ + G I A +F+ + K +
Sbjct: 358 LSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSI 417
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
WN +I G +G VA +LF +M D ++ ++N ++ + + F+
Sbjct: 418 DHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFEL 477
Query: 233 MP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
M E + + ++ +L R G V+EA ++EK P
Sbjct: 478 MRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMP 515
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 166/355 (46%), Gaps = 38/355 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ +++ A +LF++MP+RD V+W M+ GY K G +D A LF++MPERD+ + N ++A
Sbjct: 264 VKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMA 323
Query: 61 GLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDE--ALRVF---HGMP 110
G +Q+ ++ A F M R D T +S G DE AL + +G
Sbjct: 324 GYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFS 383
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
L + + L I C +D A S F+++ + + W ++ GL G A +LF +
Sbjct: 384 LSEKLGVAL-IDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFME 442
Query: 171 MPAKDVQAWNLMIAGYLDNGC--VGVAE------DLFQKMH--DRDLTSWKQLINGLVNS 220
M V+ ++ G L N C G+ + +L +++H + L + +++ L +
Sbjct: 443 MEKLFVKPDDITFIGVL-NACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRA 501
Query: 221 RRIDAAISYFKQMP-ETCEKTWNSIISVL-------IRNGLVKEAHSYLEKYPYSNIASW 272
++ A + ++MP E + W +++S I + K S ++ Y S+
Sbjct: 502 GHVEEAKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLIS-VDSYNPSSYVLL 560
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
+N+ G+ G ++ +M RD+ I G + +L +FFV+ K
Sbjct: 561 SNIYAGF---GMWNDVYRIRMMMKQRDLK----KIPGCSQIELEGNVHEFFVRDK 608
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 35/227 (15%)
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
+WN +I + E F M E+G D +F+ VL CS L + G QIH
Sbjct: 89 LWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLL 148
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
++ + N ++ +Y RCG + A F + D +S+NS+I G HG + A
Sbjct: 149 GRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSAR 208
Query: 422 ELFERMRLTDF------------------------------KPDDITFVGVLSACSYAGL 451
ELF+ M + K D I++ ++ C G
Sbjct: 209 ELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGK 268
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
++ + F+ M + + + +VD + G ID A L +E+
Sbjct: 269 MENAHHLFNQMPKRDVVS-----WANMVDGYAKLGEIDIARGLFDEM 310
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 166/462 (35%), Positives = 275/462 (59%), Gaps = 33/462 (7%)
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+++N V+ + +A +LFD+MP ++V +W MI+ Y + C K+H + L
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAY--SKC---------KIHQKAL-- 147
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV-LIRNGLVKEAHSYLEKYPYSN 268
+ L+ L ++ R + + + + +C N + V ++ G++KE LE S+
Sbjct: 148 -ELLVLMLRDNVRPN--VYTYSSVLRSC----NGMSDVRMLHCGIIKEG---LE----SD 193
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ + +I + ++GE A+ VF+ M T D VWN +I G +N + L+ F +MK
Sbjct: 194 VFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKR 253
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
+G + AT TSVL C+ L L+LG Q H +K +Q ++NA++ MY +CG+++
Sbjct: 254 AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLED 311
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
AL F+ + D+I+W+++I GLA +GY+++AL+LFERM+ + KP+ IT VGVL ACS+
Sbjct: 312 ALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSH 371
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
AGL++ G YYF MK Y + P HY C++DLLG+ G +D+A+ LLNE+ E
Sbjct: 372 AGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMEC---EPDAV 428
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
W LLGACR+ N+ + E A ++V+ L+P ++G Y +L+ +Y + + + + I +M+
Sbjct: 429 TWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMR 488
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
+ G+KKEPGCSWI++N H F+ GD+SHP+ + LN L
Sbjct: 489 DRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQL 530
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 142/324 (43%), Gaps = 23/324 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
+ +A LFD+MPQR+ ++W MI Y K A+ L M +++TY++V+
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 62 LMQSDNVQ--GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+V+ + +G+E DV +++I + G ++AL VF M D + WN
Sbjct: 172 CNGMSDVRMLHCGIIKEGLE-SDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 230
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA------ 173
+IG R D+A FK M + + ++R + +L +
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD 290
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
+D+ N ++ Y G + A +F +M +RD+ +W +I+GL + A+ F++M
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350
Query: 234 PETCEK-TWNSIISVLI---RNGLVKEAHSYLEK----YPYSNIASWTNVIVGYF-EMGE 284
+ K + +I+ VL GL+++ Y Y + ++ + G+
Sbjct: 351 KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGK 410
Query: 285 VGSAIKVF-ELMTTRDVTVWNVMI 307
+ A+K+ E+ D W ++
Sbjct: 411 LDDAVKLLNEMECEPDAVTWRTLL 434
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 157/384 (40%), Gaps = 64/384 (16%)
Query: 20 DTVTWNVMIRGYFKNGFLD--NAMC--LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF 75
D+ T++ +I+ N + N +C L+ MF N +I ++ + + A ++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI--GALVNCQRMD-- 131
D M R+V++W +MIS Y + +AL + M L+D V N+ L +C M
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLM-LRDNVRPNVYTYSSVLRSCNGMSDV 178
Query: 132 --LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
L KE DV + +++ + G +A +FD+M D WN +I G+ N
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238
Query: 190 GCVGVAEDLFQKM-------------------------------------HDRDLTSWKQ 212
VA +LF++M +D+DL
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNA 298
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW 272
L++ ++ A+ F QM E TW+++IS L +NG +EA E+ S
Sbjct: 299 LVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 358
Query: 273 TNVIVG-YFEMGEVG----------SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
IVG F G S K++ + R+ + MI LG+ ++ +K
Sbjct: 359 YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE--HYGCMIDLLGKAGKLDDAVK 416
Query: 322 FFVQMKESGPSPDNATFTSVLTIC 345
+M+ PD T+ ++L C
Sbjct: 417 LLNEME---CEPDAVTWRTLLGAC 437
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 118/269 (43%), Gaps = 50/269 (18%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------------ 48
++A ++FD+M D + WN +I G+ +N D A+ LF +M
Sbjct: 211 EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC 270
Query: 49 -------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
++D+ N ++ + +++ A VF+ M+ RDV+TW++M
Sbjct: 271 TGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMDLAES---YFKEM----G 141
ISG NG EAL++F M ++ ++G L C L E YF+ M G
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 142 ARDV-ASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGVAEDLF 199
V + M++ L + G++ +A KL ++M + D W ++ + +AE
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450
Query: 200 QK---MHDRDLTSWKQLINGLVNSRRIDA 225
+K + D ++ L N NS++ D+
Sbjct: 451 KKVIALDPEDAGTYTLLSNIYANSQKWDS 479
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 30/266 (11%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM 78
+D + N ++ Y K G L++A+ +FNQM ERD+ T++T+I+GL Q+ Q A ++F+ M
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350
Query: 79 EVRDVVTWNSMISG--YVCN--GLIDEALRVFHGM-------PLKDVVSWNLVIGALVNC 127
+ I G + C+ GL+++ F M P+++ + +I L
Sbjct: 351 KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE--HYGCMIDLLGKA 408
Query: 128 QRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPA---KDVQAWNLMI 183
++D A EM D +W ++ + +V A K+ A +D + L+
Sbjct: 409 GKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLS 468
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDL-----TSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
Y ++ E++ +M DR + SW ++ +++I A I P+ E
Sbjct: 469 NIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV------NKQIHAFIIGDNSHPQIVE 522
Query: 239 --KTWNSIISVLIRNGLVKEAHSYLE 262
K N +I L G V E + L+
Sbjct: 523 VSKKLNQLIHRLTGIGYVPETNFVLQ 548
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 84/163 (51%), Gaps = 17/163 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMF-TYNTVI----- 59
+++A +F++M +RD +TW+ MI G +NG+ A+ LF +M Y T++
Sbjct: 309 LEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 368
Query: 60 ---AGLMQSD--NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-D 113
AGL++ + K+++ VR+ + MI G +D+A+++ + M + D
Sbjct: 369 CSHAGLLEDGWYYFRSMKKLYGIDPVRE--HYGCMIDLLGKAGKLDDAVKLLNEMECEPD 426
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGA---RDVASWTIMVN 153
V+W ++GA + M LAE K++ A D ++T++ N
Sbjct: 427 AVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSN 469
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 196/657 (29%), Positives = 329/657 (50%), Gaps = 80/657 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-----ERDMFTYNTVI---- 59
++ FD++ ++D TWN MI Y +NG A+ F Q+ + D +T+ V+
Sbjct: 127 SRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQ 186
Query: 60 ------------------------AGLMQSDNVQG----AKEVFDGMEVRDVVTWNSMIS 91
A L+ + G A+ +FD M RD+ +WN+MIS
Sbjct: 187 TLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMIS 246
Query: 92 GYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL--VNCQRMDLAES-----YFKEMGAR- 143
G + NG +AL V M L+ + ++ + ++ V Q D++ + Y + G
Sbjct: 247 GLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEF 306
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
++ ++N + G + +A+K+F +M +DV +WN +IA Y N A F KM
Sbjct: 307 ELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQ 366
Query: 204 ----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
+ DL + L + SR K S+ ++R G + EA
Sbjct: 367 LNGLEPDLLTLVSLASIAAQSRDY---------------KNSRSVHGFIMRRGWLMEA-- 409
Query: 260 YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+ V+ Y ++G + SA KVF L+ +DV WN +I G +N L E
Sbjct: 410 ---------VVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEA 460
Query: 320 LKFFVQMKESGPSPDN-ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
++ + M+E N T+ S+L + + L G +IH IK + V +I
Sbjct: 461 IEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLID 520
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
+Y +CG + A+ F VP + WN+II HG+ EKAL+LF M+ KPD +T
Sbjct: 521 LYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVT 580
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
F+ +LSACS++GLVD+G+++F M+ +Y ++P HY C+VDLLGR G ++ A + + ++
Sbjct: 581 FISLLSACSHSGLVDEGKWFFHLMQ-EYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDM 639
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
+ ++WGALLGACRIH NI++G+ A +R+ E++ N G Y++L+ +Y + G+ E
Sbjct: 640 ---PLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWE 696
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
++ + +E G+KK PG S I++N +F +G+ SHPK + L +L +++
Sbjct: 697 GVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMK 753
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 133/518 (25%), Positives = 222/518 (42%), Gaps = 103/518 (19%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM-----HDR 205
+VN G + +R FD++ KDV WN MI+ Y+ NG A D F ++
Sbjct: 114 LVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQA 173
Query: 206 DLTSWKQLING---LVNSRRIDA-----------------------------AISYFKQM 233
D ++ ++ LV+ R+I A S F M
Sbjct: 174 DFYTFPPVLKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDM 233
Query: 234 PETCEKTWNSIISVLIRNGLVKEA------------------------------------ 257
P +WN++IS LI+NG +A
Sbjct: 234 PFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTAT 293
Query: 258 --HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
H Y+ K+ +N ++ Y + G +G A KVF+ M RDV WN +I +ND
Sbjct: 294 LIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQND 353
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA-RNQFTTVS 373
FF +M+ +G PD T S+ +I + R +H ++ + +
Sbjct: 354 DPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIG 413
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDF 432
NA++ MYA+ G I SA F+ +P+ D++SWN++I G +G A +A+E++ M +
Sbjct: 414 NAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREI 473
Query: 433 KPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
K + T+V +L+A ++ G + QG R + +K L TC++DL G+ G + +A
Sbjct: 474 KLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVG--TCLIDLYGKCGRLVDA 531
Query: 492 MNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL--EPNNSGV---YLI 546
M L ++ + S W A++ IH + GE+ ++L E + GV ++
Sbjct: 532 MCLFYQVPRE----SSVPWNAIISCHGIHGH-------GEKALKLFREMQDEGVKPDHVT 580
Query: 547 LTEMYLSC---GRREDAKRIFAQMKENGVK---KEPGC 578
+ +C G ++ K F M+E G+K K GC
Sbjct: 581 FISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGC 618
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 7/225 (3%)
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL--EKYPYSNIASWTNVIVGYFEMGEVG 286
+++Q + E +NS+ + L K H+ L SN S ++ Y +G+V
Sbjct: 67 HWRQPAKNEEIDFNSLFDSCTKTLLAKRLHALLVVSGKIQSNFIS-IRLVNLYASLGDVS 125
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ-MKESGPSPDNATFTSVLTIC 345
+ F+ + +DV WN MI N E + F Q + + D TF VL C
Sbjct: 126 LSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC 185
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
TL GR+IH K+ V+ ++I MY+R G + A F +P D+ SWN
Sbjct: 186 Q---TLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWN 242
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
++I GL +G A +AL++ + MRL D +T +L C+ G
Sbjct: 243 AMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLG 287
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 153/350 (43%), Gaps = 64/350 (18%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGLM 63
+AQ +F +M RD V+WN +I Y +N A F +M E D+ T ++ +
Sbjct: 326 DAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAA 385
Query: 64 QSDN------------------------------------VQGAKEVFDGMEVRDVVTWN 87
QS + + A +VF+ + V+DVV+WN
Sbjct: 386 QSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWN 445
Query: 88 SMISGYVCNGLIDEALRVFHGMPLKDVV-----SWNLVIGALVNC----QRMDLAESYFK 138
++ISGY NGL EA+ V+ M + +W ++ A + Q M + K
Sbjct: 446 TLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIK 505
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
DV T +++ + GR+V+A LF ++P + WN +I+ + +G A L
Sbjct: 506 TNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKL 565
Query: 199 FQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPE----TCEKTWNSIISVLIR 250
F++M D D ++ L++ +S +D +F M E K + ++ +L R
Sbjct: 566 FREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGR 625
Query: 251 NGLVKEAHSYLEKYPYSNIAS-WTNV-----IVGYFEMGEVGSAIKVFEL 294
G ++ A+ +++ P AS W + I G E+G+ S ++FE+
Sbjct: 626 AGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASD-RLFEV 674
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 50/268 (18%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F S+ C+ TL L +++HA + + Q +S ++ +YA G++ + F +
Sbjct: 79 FNSLFDSCTK--TL-LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQ 135
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRL-TDFKPDDITFVGVLSACSYAGLVDQGR 456
D+ +WNS+I +G+ +A++ F ++ L T F+ D TF VL AC LVD +
Sbjct: 136 RKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQ--TLVDGRK 193
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID--------------------------- 489
+ C K Q ++ + RFG +
Sbjct: 194 IH--CWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQN 251
Query: 490 ----EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL 545
+A+++L+E+R +GI + ++L C ++G+I+ ++ L G+
Sbjct: 252 GNAAQALDVLDEMRLEGINMDSVTVASILPVC-----AQLGDISTATLIHLYVIKHGLEF 306
Query: 546 ------ILTEMYLSCGRREDAKRIFAQM 567
L MY G DA+++F QM
Sbjct: 307 ELFVSNALINMYAKFGNLGDAQKVFQQM 334
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 180/584 (30%), Positives = 299/584 (51%), Gaps = 38/584 (6%)
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
L++S + A ++FD M ++VV W S++SG NG + AL +F M V +
Sbjct: 58 LVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPNDFAC 117
Query: 122 -GALVNCQRM------DLAESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
ALV C + + S G A D + ++ R G + A+++FD+M +
Sbjct: 118 NAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDS 177
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS--RRIDAAISYF- 230
DV + +I+ + NG +A + +M + L + + ++ + R + I +
Sbjct: 178 PDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYL 237
Query: 231 -KQMPETCEKTWNS--IISVLIRN--------------------GLVKEAHSYLEKYPYS 267
K++ + ++S +I RN GL ++ H K+
Sbjct: 238 IKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLI 297
Query: 268 NIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
+N ++ Y G V + + D+ W I +N GE+ + QM
Sbjct: 298 TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQM 357
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
G +P+ F+SVL+ C+D+ +LD G Q H A+K+ + NA+I MY++CG +
Sbjct: 358 HSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQM 417
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
SA L F + HD+ SWNS+I G A HG A KALE+F +MR KPDD TF+GVL C
Sbjct: 418 GSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGC 477
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
+++G+V++G +F M ++Y P +HY C++D+LGR G DEA+ ++N++ E
Sbjct: 478 NHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMP---FEPD 534
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
+W LL +C++H N+ +G++A +R+MEL +S Y++++ +Y G EDA+++ +
Sbjct: 535 ALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRR 594
Query: 567 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
M E GVKK+ GCSWI+IN+ H F S D SHP + +L L
Sbjct: 595 MDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGEL 638
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 119/513 (23%), Positives = 208/513 (40%), Gaps = 91/513 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER---------- 50
+++ R+ +A +LFD+MP+++ V W ++ G +NG + A+ +F M E
Sbjct: 59 VKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPNDFACN 118
Query: 51 -----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
D + + +I + ++ AKEVFD M+
Sbjct: 119 AALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSP 178
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN--LVIGALVNCQRM---DLAESY 136
DVV + S+IS + NG + A M LK + N + L C R+ +
Sbjct: 179 DVVGYTSLISAFCRNGEFELAAEALIQM-LKQGLKPNEHTMTTILTACPRVLGQQIHGYL 237
Query: 137 FKEMGAR--DVASWTIMVN----------------------GLVREGRIVEARKLFDKMP 172
K++G R V S T +++ G + GR + + +
Sbjct: 238 IKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDL- 296
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
D++ N +++ Y G V E + K+ + DL SW I+ + + AI+ Q
Sbjct: 297 ITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQ 356
Query: 233 M-PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-------SNIASWTNVIVGYFEMGE 284
M E + SVL V ++ + S I + +I Y + G+
Sbjct: 357 MHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQ 416
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+GSA F++M T DVT WN +I G ++ + L+ F +M+ +G PD++TF VL
Sbjct: 417 MGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMG 476
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSN---AMITMYARCGNIQSALLEFSSVPIH-D 400
C+ ++ G + I + FT + MI M R G AL + +P D
Sbjct: 477 CNHSGMVEEGELFF--RLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPD 534
Query: 401 IISWNSIICGLAYHG-------YAEKALELFER 426
+ W +++ H A++ +EL +R
Sbjct: 535 ALIWKTLLASCKLHRNLDIGKLAADRLMELSDR 567
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 147/366 (40%), Gaps = 78/366 (21%)
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
+N LV+ GR+ +A LFD+MP K+V AW +++G NG A +F M + +
Sbjct: 55 LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAP-- 112
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
N +AA+ + + + S+ +R G +A
Sbjct: 113 -------NDFACNAALVACADLGAL--RAGEQVHSLAVRAGFAGDA-------------- 149
Query: 272 W--TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
W + +I Y G + +A +VF+ M + DV + +I N E + +QM +
Sbjct: 150 WIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQ 209
Query: 330 GPSPDNATFTSVLTIC------------------------SDLPTLD------------- 352
G P+ T T++LT C S +D
Sbjct: 210 GLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEF 269
Query: 353 -------------LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
LGRQ+H AIK VSNA+++MY R G ++ + +
Sbjct: 270 ALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENP 329
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
D++SW + I +G+ EKA+ L +M F P+ F VLS+C+ +DQG F
Sbjct: 330 DLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQG-MQF 388
Query: 460 DCMKNK 465
C+ K
Sbjct: 389 HCLALK 394
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 140/355 (39%), Gaps = 65/355 (18%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------- 48
R ++E + + +K+ D V+W I F+NGF + A+ L QM
Sbjct: 312 RTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSS 371
Query: 49 --------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
+ ++ T N +I + + A+ FD M D
Sbjct: 372 VLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHD 431
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-LVIGALVNCQRMDLAES---YFK 138
V +WNS+I G+ +G ++AL VF M + + +G L+ C + E +F+
Sbjct: 432 VTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFR 491
Query: 139 EMGAR-----DVASWTIMVNGLVREGRIVEARKLFDKMP-AKDVQAWNLMIAGY-----L 187
M + + + M++ L R GR EA ++ + MP D W ++A L
Sbjct: 492 LMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNL 551
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
D G +A D ++ DRD S+ + N + A ++M ET K +
Sbjct: 552 DIG--KLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWI 609
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
I N E H++ S S N Y +GE+ + ++ F+ + DV +
Sbjct: 610 EINN----EVHTF-----ASRDMSHPNSDSIYQMLGELVAVMQDFDELEPFDVHI 655
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 136/307 (44%), Gaps = 25/307 (8%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D+ N +++ ++ V+ + + + +E D+V+W + IS NG ++A+ + M
Sbjct: 299 DIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMH 358
Query: 111 LKDVV----SWNLVIGALVNCQRMDLAESY----FKEMGARDVASWTIMVNGLVREGRIV 162
+ +++ V+ + + +D + K ++ + ++N + G++
Sbjct: 359 SEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMG 418
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLV 218
AR FD M DV +WN +I G+ +G A ++F KM D +++ ++ G
Sbjct: 419 SARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCN 478
Query: 219 NSRRIDAAISYFKQMPETCEKT-----WNSIISVLIRNGLVKEAHSYLEKYPYSNIA-SW 272
+S ++ +F+ M + T + +I +L RNG EA + P+ A W
Sbjct: 479 HSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIW 538
Query: 273 TNVIVGY-----FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
++ ++G++ +A ++ EL + RD + +M + E+ K +M
Sbjct: 539 KTLLASCKLHRNLDIGKL-AADRLMEL-SDRDSASYVLMSNIYAMHGEWEDARKVRRRMD 596
Query: 328 ESGPSPD 334
E+G D
Sbjct: 597 ETGVKKD 603
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 191/656 (29%), Positives = 311/656 (47%), Gaps = 94/656 (14%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTY-------- 55
A L D+MP+R+ V++N++I Y + G ++ F + D FTY
Sbjct: 54 HAARLLDEMPRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACS 113
Query: 56 ---------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
N+V + + + A+ VFD E RD V+WN+
Sbjct: 114 RALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNA 173
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWN-LVIGALVNCQRMDLAESYFKEMGARDVAS 147
++SGYV G +E L VF M + + WN +G+++ C + + ++G +A
Sbjct: 174 LLSGYVRAGAREETLEVFSLM-CRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAE 232
Query: 148 W-----------------TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
+ M++ + G + A LF +P +V N MIAG+
Sbjct: 233 AVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREE 292
Query: 191 CVGVAED---LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
VA + L+ ++ R + + + ++ + + + KQ+
Sbjct: 293 AADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQI-------------- 338
Query: 248 LIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVM 306
H + K+ + ++ + +I Y G + + F + +DV +W +
Sbjct: 339 ----------HGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSV 388
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
I G +N+L EE L+ F + G PD +SV+ C+ L G QI A+K
Sbjct: 389 ISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGF 448
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
N+FT + N+ I M AR G++ +A F + D++SW+++I A+HG A AL +F
Sbjct: 449 NRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNE 508
Query: 427 MRLTDFK---PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
M D K P++ITF+ +L+ACS+ GLVD+G Y+ M ++Y L P H TCVVDLLG
Sbjct: 509 M--LDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLG 566
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGV 543
R G + +A IR VW +LL +CRIH +++ G++ +++M+LEP +S
Sbjct: 567 RAGRLADAEAF---IRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADKIMDLEPTSSAS 623
Query: 544 YLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
Y+IL MYL G A + MKE GVKKEPG SWI+++ G H F++GD SHP+
Sbjct: 624 YVILYNMYLDAGELSSASKTRDLMKERGVKKEPGLSWIELSSGVHSFVAGDKSHPE 679
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/479 (20%), Positives = 201/479 (41%), Gaps = 55/479 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
R + EA+ +FD +RD V+WN ++ GY + G + + +F+ M + F +
Sbjct: 149 RCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGS 208
Query: 58 VI------AGLMQSDNVQGAK--EVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALR 104
+I + + +V G + E G V+ D+ ++MI Y G + A+
Sbjct: 209 IIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVA 268
Query: 105 VFHGMPLKDVVSWNLVIGALVNCQRMDLAE---SYFKEMGARDVASWTIMVNGLVRE--- 158
+F +P +V+ N +I + D+A + E+ +R + + ++R
Sbjct: 269 LFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNL 328
Query: 159 ------GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
G+ + + L DV + +I Y +GC+ F+ + +D+ W
Sbjct: 329 AGEFGFGKQIHGQVLKHSFQG-DVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTS 387
Query: 213 LINGLVNSRRIDAAISYFKQ------MPE--TCEKTWNSIISVLI-RNGLVKEAHSYLEK 263
+I+G V + + A+ F++ P+ N+ S+ + R G ++ K
Sbjct: 388 VISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTG--EQIQCLAVK 445
Query: 264 YPYSNIASWTNVIVGYF-EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
++ + N + G+V +A + F+ M +RDV W+ +I + + L
Sbjct: 446 SGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCV 505
Query: 323 FVQMKESGPSPDNA-TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF---TTVSN--AM 376
F +M ++ +P N TF S+LT CS +D G + + I +++ T+ + +
Sbjct: 506 FNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYG----IMNDEYGLSPTIKHCTCV 561
Query: 377 ITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
+ + R G + A H D + W S++ HG E+ + + ++ D +P
Sbjct: 562 VDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVAD--KIMDLEP 618
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 130/305 (42%), Gaps = 37/305 (12%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G + A +L D+MP ++ ++NL+I Y G ++ F + +W ++++
Sbjct: 50 GAPLHAARLLDEMPRRNAVSYNLVIVAYSRAGLPALSLATFARAR-----AWARVVDRFT 104
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+ C + + +R G K H+ + N +N +
Sbjct: 105 -----------YAAALAACSRALD------VRTG--KAVHAMVVLGGLGNGLFLSNSVAS 145
Query: 279 -YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y GE+G A +VF+ RD WN ++ G EE L+ F M G ++
Sbjct: 146 MYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFA 205
Query: 338 FTSVLTIC---------SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
S++ C D+ + +H +K + +++AMI MYA+ G + +
Sbjct: 206 LGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTN 265
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAE---KALELFERMRLTDFKPDDITFVGVLSA 445
A+ F SVP ++I N++I G A+ +AL L+ ++ +P + +F +L A
Sbjct: 266 AVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRA 325
Query: 446 CSYAG 450
C+ AG
Sbjct: 326 CNLAG 330
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Query: 254 VKEAHSYLEK-YPYSNIASWTNVIVGYFEMGEVGS---AIKVFELMTTRDVTVWNVMIFG 309
V H++L + +P +++ ++ Y +G VG+ A ++ + M R+ +N++I
Sbjct: 18 VAAVHAHLARAHPNASLFLRNCLLASYCRLG-VGAPLHAARLLDEMPRRNAVSYNLVIVA 76
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
L L F + + D T+ + L CS + G+ +HA +
Sbjct: 77 YSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNG 136
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
+SN++ +MYARCG + A F + D +SWN+++ G G E+ LE+F M
Sbjct: 137 LFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLM 194
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 98/233 (42%), Gaps = 46/233 (19%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R+ + A F +M RD V+W+ +I + +G +A+C+FN+M + + N
Sbjct: 464 RSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNE---- 519
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF------HGMPLKDVV 115
+T+ S+++ GL+DE LR + +G+ +
Sbjct: 520 ----------------------ITFLSILTACSHGGLVDEGLRYYGIMNDEYGLS-PTIK 556
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVA-SW-----TIMVNGLVREGRIVEARKLFD 169
V+ L R+ AE++ ++ D A W + ++G + G++V A K+ D
Sbjct: 557 HCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLV-ADKIMD 615
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT-----SWKQLINGL 217
P ++ ++ YLD G + A M +R + SW +L +G+
Sbjct: 616 LEPTSSA-SYVILYNMYLDAGELSSASKTRDLMKERGVKKEPGLSWIELSSGV 667
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 184/657 (28%), Positives = 326/657 (49%), Gaps = 82/657 (12%)
Query: 13 FDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTY------------- 55
FD++ + WN+++ K+G ++ LF +M E D +T+
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 56 ----------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGY 93
N+++A +++ V A++VFD M RDV++WNS+I+GY
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 94 VCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESY----FKEMGARDV 145
V NGL ++ L VF M + D+ + V + + + L + K +R+
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 146 ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
+++ + G + A+ +F +M + V ++ MIAGY G G A LF++M +
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240
Query: 206 DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
++ + ++N + ++ + E K H ++++
Sbjct: 241 GISPDVYTVTAVLN------CCARYRLLDEG------------------KRVHEWIKEND 276
Query: 266 YSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF- 323
+N ++ Y + G + A VF M +D+ WN +I G +N E L F
Sbjct: 277 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 336
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMY 380
+ ++E SPD T VL C+ L D GR+IH I RN + + V+N+++ MY
Sbjct: 337 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGY---IMRNGYFSDRHVANSLVDMY 393
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
A+CG + A + F + D++SW +I G HG+ ++A+ LF +MR + D+I+FV
Sbjct: 394 AKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFV 453
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
+L ACS++GLVD+G +F+ M+++ ++P HY C+VD+L R G + +A + +
Sbjct: 454 SLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM-- 511
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
I T+WGALL CRIH+++K+ E E+V ELEP N+G Y+++ +Y + E
Sbjct: 512 -PIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQV 570
Query: 561 KRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
KR+ ++ + G++K PGCSWI+I ++F++GDSS+P+ + L + + E
Sbjct: 571 KRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEE 627
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 218/503 (43%), Gaps = 84/503 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYN 56
++N R+ A+ +FD+M +RD ++WN +I GY NG + + +F QM E D+ T
Sbjct: 90 LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 149
Query: 57 TVIAGLMQS-----------------------------------DNVQGAKEVFDGMEVR 81
+V AG S ++ AK VF M R
Sbjct: 150 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR 209
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC----QRMDLAESYF 137
VV++ SMI+GY GL EA+++F M + + + A++NC + +D +
Sbjct: 210 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 269
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ + D+ + N L+ + G + EA +F +M KD+ +WN +I GY N
Sbjct: 270 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYAN 329
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A LF N L+ +R + C + +S +
Sbjct: 330 EALSLF---------------NLLLEEKRFSP-----DERTVACVLPACASLSAFDKG-- 367
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+E H Y+ + Y + N +V Y + G + A +F+ + ++D+ W VMI G G
Sbjct: 368 -REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 426
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI-----HAQAIKIARN 367
+ G+E + F QM+++G D +F S+L CS +D G + H I+
Sbjct: 427 HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVE 486
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYHGYAEKALELFER 426
+ + + M AR G++ A ++PI D W +++CG H + A ++ E
Sbjct: 487 HYACI----VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE- 541
Query: 427 MRLTDFKPDDITFVGVLSACSYA 449
++ + +P++ + VL A YA
Sbjct: 542 -KVFELEPENTGYY-VLMANIYA 562
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 253/435 (58%), Gaps = 4/435 (0%)
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
A ++F++MP +DV +WN MI+ Y+ G + A L KM +R++ +W ++ GL + +
Sbjct: 129 AYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVTWNSVVCGLSKAGNM 188
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMG 283
+ A S F+QMP E +WNS+IS +R G V+ A S + P + SWT +I GY G
Sbjct: 189 ELAHSVFEQMPLRNEVSWNSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGYATNG 248
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS-PDNATFTSVL 342
++ SA +F M ++V WN MI G N ++ L F M +G PD T S+L
Sbjct: 249 DLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISIL 308
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
+ C+ L +L+ G+ I++ K + + NA+I M+A+CG++++A F + II
Sbjct: 309 SACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCII 368
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
+W +++ GLA +G +A+ LF++M L KPDD+ F+ VLSAC++ GLV++G+ FD M
Sbjct: 369 TWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQM 428
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
++ ++PR HY C+VDLLGR G ++EA+ + ++ + +W LL C+IH N
Sbjct: 429 VQEFGIKPRIEHYGCMVDLLGRAGKLEEAVRFTARMH---LKPNAVIWATLLFCCKIHGN 485
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
+ + E++M+ EP+N +++ + S GR ED M++ ++K PGCS IQ
Sbjct: 486 GDLLKSVTEKIMDQEPSNPSYLTLVSNLSASFGRWEDVLSFRVAMRQQRMEKVPGCSSIQ 545
Query: 583 INDGGHVFLSGDSSH 597
+ + H FL+ D+ H
Sbjct: 546 VGNRVHEFLAKDTRH 560
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 222/468 (47%), Gaps = 51/468 (10%)
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
S+N+ A VF+ M RDV++WNSMIS Y+ G I A+ + MP +++V+WN V+ L
Sbjct: 123 SENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVTWNSVVCGL 182
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
M+LA S F++M R+ SW M++G VR G + A+ +F +MP K V +W MI+
Sbjct: 183 SKAGNMELAHSVFEQMPLRNEVSWNSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMIS 242
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM--PETCEKTWN 242
GY NG + AE++F M +++ SW +I+G V++ D A+ F M C
Sbjct: 243 GYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQT 302
Query: 243 SIISVL--------IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF-EMGEVGSAIKVFE 293
++IS+L + +G K +SY++K N ++ F + G+V +A +VF
Sbjct: 303 TLISILSACAHLGSLEHG--KWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFH 360
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
M+ R + W M+ GL N E + F +M G PD+ F +VL+ C+ ++
Sbjct: 361 HMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEE 420
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
G+++ Q ++ EF P I + ++ L
Sbjct: 421 GKRVFDQMVQ----------------------------EFGIKP--RIEHYGCMVDLLGR 450
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSA 473
G E+A+ RM L KP+ + + +L C G D + + + ++ +P +
Sbjct: 451 AGKLEEAVRFTARMHL---KPNAVIWATLLFCCKIHGNGDLLKSVTEKIMDQ---EPSNP 504
Query: 474 HY-TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
Y T V +L FG ++ ++ +R +E P +G R+H
Sbjct: 505 SYLTLVSNLSASFGRWEDVLSFRVAMRQQRMEKVPGCSSIQVGN-RVH 551
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 182/395 (46%), Gaps = 41/395 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M IQ A L DKMP+R+ VTWN ++ G K G ++ A +F QMP R+ ++N++I+
Sbjct: 152 MTRGEIQSAIGLLDKMPERNIVTWNSVVCGLSKAGNMELAHSVFEQMPLRNEVSWNSMIS 211
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ +V+ A+ +F M + VV+W +MISGY NG + A +F+ MP+K+VVSWN +
Sbjct: 212 GYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAM 271
Query: 121 IGALVNCQRMDLAESYFKEM-----GARDVASWTIMVNGLVREGRI---------VEARK 166
I V+ D A F M D + +++ G + ++ K
Sbjct: 272 ISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNK 331
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
L +P N +I + G V A+++F M R + +W +++GL + + A
Sbjct: 332 LHLSIPLG-----NALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREA 386
Query: 227 ISYFKQMPETCEKT----WNSIISVLIRNGLVKEAHSYLEKYPYS-----NIASWTNVIV 277
I+ F +M K + +++S GLV+E ++ I + ++
Sbjct: 387 INLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCMVD 446
Query: 278 GYFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGL---GENDLGEEGLKFFVQMKESGPSP 333
G++ A++ M + + +W ++F G DL + + + + S P
Sbjct: 447 LLGRAGKLEEAVRFTARMHLKPNAVIWATLLFCCKIHGNGDLLKSVTEKIMDQEPSNP-- 504
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
S LT+ S+L + GR + ++A Q
Sbjct: 505 ------SYLTLVSNL-SASFGRWEDVLSFRVAMRQ 532
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 132/349 (37%), Gaps = 84/349 (24%)
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ M + +TV + F L + +E L+ + +MK ++ TFT +L L+
Sbjct: 34 DFMLPKLITVSSA--FNLLDYATHKEALRVYSRMKALMVEANSFTFTFLLKCFETSQALE 91
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARC----------------------------- 383
GR IH + +K+ V N+++ YA C
Sbjct: 92 DGRVIHGEILKLGFGSSVFVQNSLLGFYANCSENLGSAYRVFEEMPERDVISWNSMISAY 151
Query: 384 ---GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
G IQSA+ +P +I++WNS++CGL+ G E A +FE+M L +++++
Sbjct: 152 MTRGEIQSAIGLLDKMPERNIVTWNSVVCGLSKAGNMELAHSVFEQMPLR----NEVSWN 207
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
++S G V + F M K + +T ++ G + A N+ N +
Sbjct: 208 SMISGYVRIGDVRAAQSIFYQMPEKTVVS-----WTAMISGYATNGDLKSAENIFNHMPV 262
Query: 501 DGIEVSPTVWGALLGA-----------CRIHNNIKVGEIAGERVMELEPNNSGVYL---- 545
+ W A++ C H+ + GE ++ + ++ +L
Sbjct: 263 KNV----VSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLE 318
Query: 546 ----------------------ILTEMYLSCGRREDAKRIFAQMKENGV 572
L +M+ CG E+AK +F M + +
Sbjct: 319 HGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCI 367
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 180/600 (30%), Positives = 307/600 (51%), Gaps = 67/600 (11%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF------NQMPERDMFTYNTVIAGL 62
A+ +FD +PQ WN MI+GY + N + ++ N P+R FT+ ++ G
Sbjct: 60 ARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDR--FTFPFLLKGF 117
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
++ +Q K + + +++ G+ N + +A H L
Sbjct: 118 TRNMALQYGKVLLN----------HAVKHGFDSNLFVQKAF--IHMFSL----------- 154
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
C+ +DLA F A +V +W IM++G R + +++ LF +M + V ++
Sbjct: 155 ----CRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVT 210
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL---INGLVNSRRIDAAISYFKQMPETCEK 239
+ L + C + +DL K + ING + R +
Sbjct: 211 LVLML-SACSKL----------KDLEGGKHIYKYINGGIVERNLILE------------- 246
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
N +I + G + EA S + ++ SWT+++ G+ +G++ A K F+ + RD
Sbjct: 247 --NVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERD 304
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
W MI G + E L F +M+ S PD T S+LT C+ L L+LG +
Sbjct: 305 YVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKT 364
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
K + T V NA+I MY +CGN+ A F + D +W ++I GLA +G+ E+
Sbjct: 365 YIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEE 424
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
AL +F M PD+IT++GVL AC++AG+V++G+ +F M ++ ++P HY C+V
Sbjct: 425 ALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMV 484
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
DLLGR G ++EA ++ + ++ + VWG+LLGACR+H N+++ E+A ++++ELEP
Sbjct: 485 DLLGRAGRLEEAHEVIVNM---PVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPE 541
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
N VY++L +Y +C R E+ +++ M E G+KK PGCS +++N + F++GD SHP+
Sbjct: 542 NGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQ 601
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 147/379 (38%), Gaps = 65/379 (17%)
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGY---FEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
+K+ HS+ K S+ + ++ + E G++ A +VF+ + + +WN MI G
Sbjct: 23 LKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGY 82
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+ + G+ ++ M S PD TF +L + L G+ + A+K +
Sbjct: 83 SRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNL 142
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
V A I M++ C + A F ++++WN ++ G +K+ LF M
Sbjct: 143 FVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKR 202
Query: 431 DFKPDDITFVGVLSACSY-----------------------------------AGLVDQG 455
P+ +T V +LSACS G +D+
Sbjct: 203 GVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEA 262
Query: 456 RYYFDCMKN-----------------------KYFLQPRSAHY---TCVVDLLGRFGLID 489
+ FD MKN KYF Q Y T ++D R
Sbjct: 263 QSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFI 322
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILT 548
EA+ L E++ ++ ++L AC +++GE + + N++ V L
Sbjct: 323 EALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALI 382
Query: 549 EMYLSCGRREDAKRIFAQM 567
+MY CG AK++F +M
Sbjct: 383 DMYFKCGNVGKAKKVFKEM 401
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 17/248 (6%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+ EAQ++FD M RD ++W ++ G+ G +D A F+Q+PERD ++ +I G +
Sbjct: 257 GEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYL 316
Query: 64 QSDNVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLID--EALRVF--HGMPLKDVV 115
+ + A +F M++ +V T S+++ G ++ E ++ + D
Sbjct: 317 RMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTF 376
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
N +I C + A+ FKEM +D +WT M+ GL G EA +F M
Sbjct: 377 VGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEAS 436
Query: 176 VQAWNLMIAGYL----DNGCVGVAEDLFQKMH-----DRDLTSWKQLINGLVNSRRIDAA 226
+ + G L G V + F M ++T + +++ L + R++ A
Sbjct: 437 ITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEA 496
Query: 227 ISYFKQMP 234
MP
Sbjct: 497 HEVIVNMP 504
>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 197/663 (29%), Positives = 313/663 (47%), Gaps = 83/663 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN-------- 56
A+ LFD+MP+R+ +++N +I GY + GF + AM LF + + D FTY
Sbjct: 102 ARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGE 161
Query: 57 -------------TVIAGLMQS--------------DNVQGAKEVFDGMEVRDVVTWNSM 89
V+ GL Q + A +FD RD V+WNS+
Sbjct: 162 RCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSL 221
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAES----------YFKE 139
ISGYV G +E L + M + +G+++ ++L E Y +
Sbjct: 222 ISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAK 281
Query: 140 MGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD-----NGCVG 193
+G D+ T +++ + G + EA KLF MPAK+V +N MI+G+L +
Sbjct: 282 LGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASS 341
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE-TCEKTWNSIISVLIRNG 252
A LF +M R L + ++ + + Y +Q+ C+ + S I +
Sbjct: 342 EAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQS--DEFIGSA 399
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
L++ Y MG ++ F + +D+ W +I +
Sbjct: 400 LIEL----------------------YALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQ 437
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N+ E F Q+ S P+ T + +++ C+D L G QI AIK + +T+V
Sbjct: 438 NEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSV 497
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+ I+MYA+ GN+ A F V D+ +++++I LA HG A AL +FE M+
Sbjct: 498 KTSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGI 557
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
KP+ F+GVL AC + GLV G YF MKN Y + P H+TC+ DLLGR G + +A
Sbjct: 558 KPNQQAFLGVLIACCHGGLVTHGVNYFQTMKNSYGINPNEKHFTCLADLLGRTGRLSDAE 617
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
NL I + G + P +W ALL +CR++ + +G+ ER+MELEP SG Y++L +Y
Sbjct: 618 NL---ILSSGFQDHPVMWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYN 674
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
G A+ + M++ GVKKEP SWI + + H F D SHP + +L+ ++T
Sbjct: 675 DSGVNSSAEEVRELMRDRGVKKEPALSWIVLGNQTHSFAVADWSHPSSQMIYTMLDTMNT 734
Query: 613 EIE 615
++
Sbjct: 735 VVD 737
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 141/347 (40%), Gaps = 46/347 (13%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + E+G A ++F+ M R++ +N +I G + E+ ++ F++ ++ D T+
Sbjct: 93 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTY 152
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
L C + LD G+ +H + +Q + N +I MY++CG + A+ F
Sbjct: 153 AGALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNE 212
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY---AGLVDQG 455
D +SWNS+I G G AE+ L L +M K VL AC GL+++G
Sbjct: 213 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKG 272
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN------------------- 496
C K ++ T ++D+ + G + EA+ L +
Sbjct: 273 -MAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQ 331
Query: 497 -----------------EIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEP 538
E++ G+E SP+ + +L AC ++ G +I
Sbjct: 332 MDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 391
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
++ + L E+Y G ED + FA K+ SW I D
Sbjct: 392 SDEFIGSALIELYALMGSTEDGMQCFA-----STSKQDIASWTSIID 433
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 168/374 (44%), Gaps = 34/374 (9%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIA 60
++ +A +LFD+ +RD V+WN +I GY + G + + L +M + + +V+
Sbjct: 199 KLDQAMSLFDRCNERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLK 258
Query: 61 --------GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
GLM+ GME D+V +++ Y NG + EA+++F MP K
Sbjct: 259 ACCINLNEGLMEKGMAIHCYAAKLGMEF-DIVVRTALLDMYAKNGSLKEAIKLFSLMPAK 317
Query: 113 DVVSWNLVIGALVNCQRM-DLAES----YFKEMGARDV----ASWTIMVNGLVREGRIVE 163
+VV++N +I + + D A S F EM R + +++++++ +
Sbjct: 318 NVVTYNAMISGFLQMDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEY 377
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLD-NGCVGVAED---LFQKMHDRDLTSWKQLINGLVN 219
R++ + + Q+ + + ++ +G ED F +D+ SW +I+ V
Sbjct: 378 GRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQ 437
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYP----YSNIASWTNV 275
+ ++++A F+Q+ + + +S+++ A S E+ S I ++T+V
Sbjct: 438 NEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSV 497
Query: 276 ----IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
I Y + G + A KVF + DV ++ MI L ++ + L F MK G
Sbjct: 498 KTSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGI 557
Query: 332 SPDNATFTSVLTIC 345
P+ F VL C
Sbjct: 558 KPNQQAFLGVLIAC 571
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 120/300 (40%), Gaps = 52/300 (17%)
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
LG L Q K + + D+ + + + +L LG+ H +K + N + N
Sbjct: 30 LGYRFLSSLCQPKNT--ALDSEAYKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLN 87
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
++ MY +C + A F +P +IIS+NS+I G G+ E+A+ELF R + K
Sbjct: 88 NLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKL 147
Query: 435 DDITFVGVLSAC-----------------------------------SYAGLVDQGRYYF 459
D T+ G L C S G +DQ F
Sbjct: 148 DKFTYAGALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLF 207
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
D + + ++ R G +E +NLL ++ G++++ G++L AC I
Sbjct: 208 DRCNER-----DQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCI 262
Query: 520 HNNIKVGE-------IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ N + E A + ME + V L +MY G ++A ++F+ M V
Sbjct: 263 NLNEGLMEKGMAIHCYAAKLGMEFDIV---VRTALLDMYAKNGSLKEAIKLFSLMPAKNV 319
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/323 (18%), Positives = 132/323 (40%), Gaps = 65/323 (20%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFK-NGFLDNAMC----LFNQMPERDMFTYN 56
+N ++EA LF MP ++ VT+N MI G+ + + D A LF +M R +
Sbjct: 300 KNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFMEMQRRGLEPSP 359
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVTWN----------SMISGYVCNGLIDEALRVF 106
+ + ++++ AK + G ++ ++ N ++I Y G ++ ++ F
Sbjct: 360 STFSVVLKA--CSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCF 417
Query: 107 HGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV--------------ASWTIMV 152
+D+ SW +I V ++++ A F+++ + + A + +
Sbjct: 418 ASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALS 477
Query: 153 NG-------------------------LVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
+G + G + A K+F ++ DV ++ MI+
Sbjct: 478 SGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSLA 537
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLV----NSRRIDAAISYFKQMPETC-----E 238
+G A ++F+ M R + +Q G++ + + ++YF+ M + E
Sbjct: 538 QHGSAHDALNIFESMKTRGIKPNQQAFLGVLIACCHGGLVTHGVNYFQTMKNSYGINPNE 597
Query: 239 KTWNSIISVLIRNGLVKEAHSYL 261
K + + +L R G + +A + +
Sbjct: 598 KHFTCLADLLGRTGRLSDAENLI 620
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 155/454 (34%), Positives = 265/454 (58%), Gaps = 28/454 (6%)
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
RK+F+ MP +D+ +WN +I+G NG A + ++M + DL +S +
Sbjct: 150 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRP---------DSFTLS 200
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMG 283
+ + F + V + G KE H Y + Y +++ +++I Y +
Sbjct: 201 SVLPIFAEY-------------VNLLKG--KEIHGYAIRNGYDADVFIGSSLIDMYAKCT 245
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
V + +VF ++ D WN +I G +N + +EGLKFF QM + P++ +F+S++
Sbjct: 246 RVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMP 305
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
C+ L TL LG+Q+H I+ + +++A++ MYA+CGNI++A F + ++D++S
Sbjct: 306 ACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVS 365
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
W ++I G A HG+A A+ LF+RM + KP+ + F+ VL+ACS+AGLVD+ YF+ M
Sbjct: 366 WTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMT 425
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
Y + P HY V DLLGR G ++EA ++++ IE + +VW LL ACR+H NI
Sbjct: 426 QDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMH---IEPTGSVWSTLLAACRVHKNI 482
Query: 524 KVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQI 583
++ E +++ ++P N G Y++L+ +Y + GR +DA+++ M++ G+KK+P CSWI+I
Sbjct: 483 ELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEI 542
Query: 584 NDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
+ H F++GD SHP + R+ L +L ++ERE
Sbjct: 543 KNKVHAFVAGDKSHPYYDRINEALKVLLEQMERE 576
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 146/331 (44%), Gaps = 40/331 (12%)
Query: 10 QNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLMQS 65
+ +F+ MP+RD V+WN +I G +NG ++A+ + +M D+ FT ++V+ +
Sbjct: 150 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 209
Query: 66 DNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
N+ KE+ G +R DV +S+I Y +D++ RVF+ +P D +SWN +
Sbjct: 210 VNLLKGKEI-HGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 268
Query: 121 IGALVNCQRMDLAESYFKEMGARDV--------------ASWTIMVNGLVREGRIVEARK 166
I V D +F++M + A T + G G I+ +R
Sbjct: 269 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSR- 327
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
FD +V + ++ Y G + A +F KM D+ SW +I G A
Sbjct: 328 -FD----GNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDA 382
Query: 227 ISYFKQMP-ETCEKTWNSIISVLI---RNGLVKEAHSYLEKYP--YSNIASWTNVIVGYF 280
IS FK+M E + + + ++VL GLV EA Y Y I +
Sbjct: 383 ISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVAD 442
Query: 281 EMGEVGSAIKVFELMTTRDV----TVWNVMI 307
+G VG + +E ++ + +VW+ ++
Sbjct: 443 LLGRVGRLEEAYEFISDMHIEPTGSVWSTLL 473
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 107/252 (42%), Gaps = 49/252 (19%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PE-------- 49
R+ ++ +F +PQ D ++WN +I G +NG D + F QM P
Sbjct: 245 TRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIM 304
Query: 50 --------------------RDMFTYNTVIAGLM-----QSDNVQGAKEVFDGMEVRDVV 84
R F N IA + + N++ A+ +FD ME+ D+V
Sbjct: 305 PACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMV 364
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEM 140
+W +MI GY +G +A+ +F M ++ V V++ V+ A + +D A YF M
Sbjct: 365 SWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSM 424
Query: 141 GA-----RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV-QAWNLMIAGYLDNGCVGV 194
+ + + + L R GR+ EA + M + W+ ++A + + +
Sbjct: 425 TQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIEL 484
Query: 195 AEDLFQKMHDRD 206
AE + +K+ D
Sbjct: 485 AEKVSKKLFTVD 496
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 196/626 (31%), Positives = 320/626 (51%), Gaps = 43/626 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIA- 60
+ A+ + +P+R V+WN ++ GY ++G M + ++ E +T TV+
Sbjct: 202 LDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKC 261
Query: 61 ----GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
GL + A + G+E +V+ + ++ Y +EA VF + DVV
Sbjct: 262 CMELGLAKYGQSVHASVIKRGLETDNVLN-SCLVEMYSRCLSAEEAYEVFIRIDEPDVVH 320
Query: 117 WNLVIGALVNC-QRMDLA---ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
+ A+++C R D+A F +M V + G+ L +
Sbjct: 321 CS----AMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVH 376
Query: 173 AKDVQAWNLMIAG--------YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
A V++ M+ G Y+ G V A F +H+ D SW +++ + +
Sbjct: 377 AYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCE 436
Query: 225 AAISYFKQMPETCEK------TWNSII---SVLIRNGLVKEAHSYLEKYPYSNIASWTNV 275
+ FKQM CE T+ S++ + L+ + H+ + K N + +
Sbjct: 437 QGLRIFKQM--ACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRM 494
Query: 276 IVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+V Y + G SA VFE + RD W V++ G + + E+ +++F M P
Sbjct: 495 LVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPS 554
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+AT L++CSD+ +L G Q+H+ AIK N + VS A++ MY +CGNI A + F
Sbjct: 555 DATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNS-SVVSGALVDMYVKCGNIADAEMLFH 613
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
D ++WN+IICG + HG+ KAL+ F++M +PD ITFVGVLSACS+AGL+++
Sbjct: 614 ESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNE 673
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
GR YF + + Y + P HY C+VD+L + G + EA +L+N++ + ++W +L
Sbjct: 674 GRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMP---LAPDSSIWRTIL 730
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
GACRIH NI++ E A ER+ ELEP+++ ++L+ +Y GR D R+ + ++GVKK
Sbjct: 731 GACRIHRNIEIAERAAERLFELEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKK 790
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKF 600
EPGCSWI+IN H+FLS D PK+
Sbjct: 791 EPGCSWIEINGQIHMFLSQDGC-PKY 815
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 205/475 (43%), Gaps = 34/475 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ R+ +A+ +FD MP RD V W MI + G D A+ +F +M + + +A
Sbjct: 97 KCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLAS 156
Query: 62 LMQ----------SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+++ + V G +G++ D +S++ Y G +D A V G+P
Sbjct: 157 VLKACSGGSHSKFTHQVHGQVVKLNGLD--DPYVGSSLVEAYTSCGELDAAETVLLGLPE 214
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGAR--DVASWTI-------MVNGLVREGRIV 162
+ VSWN ++ +++ A +++ +T+ M GL + G+ V
Sbjct: 215 RSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSV 274
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE--DLFQKMHDRDLTSWKQLINGLVNS 220
A + + +V L+ + + C+ E ++F ++ + D+ +I+
Sbjct: 275 HASVIKRGLETDNVLNSCLV---EMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRH 331
Query: 221 RRIDAAISYFKQMPETCEKT----WNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWT 273
A+ F +M K + I V R G L + H+Y+ K ++ +
Sbjct: 332 DMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVG 391
Query: 274 NVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+ I+ Y ++G V A F+L+ D WN ++ E+GL+ F QM G S
Sbjct: 392 DAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFS 451
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
+ T+ SVL C+ L L G Q+HA +K T VS ++ MYA+ G SA L
Sbjct: 452 ANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLV 511
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
F + D SW I+ G A AEK +E F M + +P D T LS CS
Sbjct: 512 FEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCS 566
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 181/450 (40%), Gaps = 54/450 (12%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
++N + GR+V+AR++FD MP +D+ AW MI+ + G A D+F +M+ +
Sbjct: 91 LLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAP- 149
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
NG + + C +S + + +VK + L+ PY
Sbjct: 150 ----NGFT-----------LASVLKACSGGSHSKFTHQVHGQVVKL--NGLDD-PYVG-- 189
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
++++ Y GE+ +A V + R WN ++ G + + ++ SG
Sbjct: 190 --SSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASG 247
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
T +VL C +L G+ +HA IK +++ ++ MY+RC + + A
Sbjct: 248 DEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAY 307
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F + D++ +++I H A +AL+LF +M KP+ FVG+ S G
Sbjct: 308 EVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTG 367
Query: 451 LVDQGRYYF---------------DCMKNKY---------------FLQPRSAHYTCVVD 480
+ R D + N Y +P + + ++
Sbjct: 368 DANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILS 427
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PN 539
++ + + ++ +G + + ++L C N++ G +++ N
Sbjct: 428 AFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQN 487
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
++ V +L +MY G A +F Q+KE
Sbjct: 488 DTDVSRMLVDMYAQSGCFTSACLVFEQLKE 517
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 315/607 (51%), Gaps = 46/607 (7%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N I Y K G L A F + + ++F++N +IA + A ++FD + D+V
Sbjct: 47 NHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLV 106
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN--CQRMDLAESYFKEMGA 142
++N++IS Y G AL +F GM + + A++ C + L +
Sbjct: 107 SYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVS 166
Query: 143 RDVASWTIMVNGLV----REGRIVEARKLFDKMPA-KDVQAWNLMIAGYLDNGCVGVAED 197
S+ + N L+ + G + +A+++F M +D +WN MI Y + A
Sbjct: 167 SGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALG 226
Query: 198 LFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
LFQ+M R D+ + ++ + + + Q LI+ G
Sbjct: 227 LFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQ---------------LIKTGF 271
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGE-VGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+ +H + +I Y + G + KVFE +T D+ +WN M+ G +
Sbjct: 272 HQNSHV------------GSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQ 319
Query: 313 ND-LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQF 369
N+ E+ L+ F QM+ G P++ +F V++ CS+L + G+QIH+ A+K I N+
Sbjct: 320 NEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRI 379
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
+ V NA+I MY++CGN+Q A F + H+ +S NS+I G A HG ++L LF+ M
Sbjct: 380 S-VDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLE 438
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
P ITF+ VLSAC++ G V++G YF+ MK K+ ++P + HY+C++DLLGR G +
Sbjct: 439 RQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLS 498
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
EA NL+ + + + W +LLGACR H NI++ A +V++LEP+N+ Y++L+
Sbjct: 499 EAENLIARMPFNPGSIG---WASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSN 555
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNL 609
MY S GR E+ + M++ GVKK+PGCSWI++ HVF++ DSSHP + L
Sbjct: 556 MYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEE 615
Query: 610 LHTEIER 616
+ +++R
Sbjct: 616 MSGKMKR 622
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 200/486 (41%), Gaps = 71/486 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ R+ A+ F + + ++N +I Y K A LF+Q+PE D+ +YNT+I+
Sbjct: 55 KCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISA 114
Query: 62 LMQSDNVQGAKEVFDGME----------VRDVVTW------------------------- 86
A +F GM + V+T
Sbjct: 115 YADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVS 174
Query: 87 --NSMISGYVCNGLIDEALRVFHGM-PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
N++++ Y NG +D+A RVF+GM ++D VSWN +I A Q A F+EM R
Sbjct: 175 VNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRR 234
Query: 144 ----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD--NGCVGVAED 197
D+ + ++ + + ++ + + +G +D + C G D
Sbjct: 235 GLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSD 294
Query: 198 ---LFQKMHDRDLTSWKQLINGLV-NSRRIDAAISYFKQM------PETCEKTWNSIISV 247
+F+++ + DL W +++G N ++ A+ F+QM P C ++ +IS
Sbjct: 295 CRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDC--SFVCVISA 352
Query: 248 ---LIRNGLVKEAHSYLEK--YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
L K+ HS K P + I+ +I Y + G + A ++F+ M +
Sbjct: 353 CSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVS 412
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
N MI G ++ + E L F M E +P + TF SVL+ C+ ++ G
Sbjct: 413 LNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNY----F 468
Query: 363 KIARNQFTTVSNA-----MITMYARCGNIQSALLEFSSVPIHD-IISWNSIICGLAYHGY 416
+ + +F A MI + R G + A + +P + I W S++ HG
Sbjct: 469 NMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGN 528
Query: 417 AEKALE 422
E A++
Sbjct: 529 IELAVK 534
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAG 61
+Q+A+ LFD+M + +TV+ N MI GY ++G ++ LF M ER + T+ +V++
Sbjct: 395 LQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSA 454
Query: 62 LMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD-VV 115
+ V+ F+ M+ + + ++ MI G + EA + MP +
Sbjct: 455 CAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSI 514
Query: 116 SWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVREGR 160
W ++GA ++L A + ++ + A + ++ N GR
Sbjct: 515 GWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGR 562
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 96/243 (39%), Gaps = 45/243 (18%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F +L C L G+ +H+ IK T SN I +Y++CG + A F +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
++ S+N+II A A +LF+++ +PD +++ ++SA
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIP----EPDLVSYNTLISA------------ 114
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
Y DC G A+ L + +R G+++ A++ AC
Sbjct: 115 YADC------------------------GETAPALGLFSGMREMGLDMDXFTLSAVITAC 150
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
+ +G++ V + V L Y G +DAKR+F M G++ E
Sbjct: 151 CDDVGL-IGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGM--GGIRDE-- 205
Query: 578 CSW 580
SW
Sbjct: 206 VSW 208
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 293/548 (53%), Gaps = 27/548 (4%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV------NCQRMDLAESYFKEM 140
N ++S Y+ ++A ++F +P+++VVSWN++I A V M L SYF+ M
Sbjct: 99 NQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRM 158
Query: 141 GARDVASWTIMVNGLV---REGRIVEARKLFDKMPAK-----DVQAWNLMIAGYLDNGCV 192
+ I NGL+ + +E K D ++ Y G V
Sbjct: 159 LLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFV 218
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVL 248
A +F + RDL W +++ V + + A F M E T++S++SV+
Sbjct: 219 ENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVI 278
Query: 249 IRNGLV-----KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
+ L K+ HS + + + S++ + +I Y + + A +VF+ M+ R+V
Sbjct: 279 SDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVA 338
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
WN MI G G + G E +K +M G PD T +S+++ C + Q+HA A+
Sbjct: 339 WNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAV 398
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
K++ F +V+N++I+ Y++CG+I SA F D+++W S+I A+HG AEK+ E
Sbjct: 399 KLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTE 458
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
+FE+M KPD I F+GVLSAC++ GLV +G +YF M N Y + P S HYTC+VDLL
Sbjct: 459 MFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLL 518
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
GR+GLI+EA +L R+ IEV GA +G+C++H+N+++ ++A E++ +EP S
Sbjct: 519 GRYGLINEAFEIL---RSMPIEVDSDTLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSV 575
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHR 602
Y +++ ++ S D +RI M++ K PGCSWI+I + H F+S D SHP
Sbjct: 576 NYAVMSNIFASQKHWYDVERIRKTMEDKRDAKVPGCSWIEIGNQIHSFVSNDKSHPNALE 635
Query: 603 LRYLLNLL 610
+ LN+L
Sbjct: 636 MYVTLNML 643
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 201/493 (40%), Gaps = 90/493 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRG------------------YFKNGFLD---- 38
++ ++A+ LF+++P R+ V+WN+MIR YF+ L+
Sbjct: 106 LKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVP 165
Query: 39 ------NAMCLFNQMPERDM-----------------FTYNTVIAGLMQSDNVQGAKEVF 75
+CL Q + +M F ++ + V+ A+ VF
Sbjct: 166 DHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVF 225
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAES 135
+ RD+V WN M+S YV N L +EA RVF+ M L V +L++ D E
Sbjct: 226 CDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEY 285
Query: 136 Y----------FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
Y ++ DV + ++N + I++AR++FD+M ++V AWN MI G
Sbjct: 286 YDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVG 345
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
+ ++G L ++M + I+ +++S +AI+ ET
Sbjct: 346 FGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAIT------ETL-------- 391
Query: 246 SVLIRNGLVKEAHSYLEKYPYSNIASWTN-VIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
+ H++ K + S N +I Y + G + SA K FEL + D+ W
Sbjct: 392 ----------QVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWT 441
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
+I+ + L E+ + F +M G PD F VL+ C+ + G K+
Sbjct: 442 SLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKG----LHYFKL 497
Query: 365 ARNQFTTVSNA-----MITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAE 418
N + V ++ ++ + R G I A S+PI D + + I H E
Sbjct: 498 MTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFIGSCKLHSNME 557
Query: 419 KALELFERMRLTD 431
A E++ L +
Sbjct: 558 LAKLAAEKLFLIE 570
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 23/230 (10%)
Query: 325 QMKESGPSPDNATF----------TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
+++ S P P+ F ++ L I + L G+Q+HA IK Q ++ N
Sbjct: 40 RLRASMPIPNQTHFNDPNTVHLFCSNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQN 99
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSII-CGLAYHGYAEKA-----LELFERMR 428
++++Y +C + A F +P+ +++SWN +I + + E + F RM
Sbjct: 100 QILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRML 159
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
L PD ITF G++ C+ ++ G C K +V L + G +
Sbjct: 160 LEMMVPDHITFNGLICLCTQFNDIEMG-VQLHCFTVKVGFDLDCFVGCALVGLYAKCGFV 218
Query: 489 DEAMNLLNEIRAD-----GIEVSPTVWGALL-GACRIHNNIKVGEIAGER 532
+ A + ++ + VS V+ +L A R+ N++++ + G+
Sbjct: 219 ENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDE 268
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 201/723 (27%), Positives = 350/723 (48%), Gaps = 132/723 (18%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF-------NQMP------ 48
++ R+ A+ +FDKMP ++ +TW+ M+ Y + G+ + A+ +F + P
Sbjct: 74 KSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLA 133
Query: 49 ---------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
++D++ ++I ++ N++ A+ VFD + +
Sbjct: 134 SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK 193
Query: 82 DVVTWNSMISGYVCNGLIDEALRVF----------------------------------H 107
VTW ++I+GY G +L +F H
Sbjct: 194 TAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIH 253
Query: 108 GMPLK-----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIV 162
L+ DV N++I C R+ F +M +++ SWT M++G ++
Sbjct: 254 AYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDW 313
Query: 163 EARKLFDKM--------------------------PAKDVQAW----NLMIAGYLDNGCV 192
EA KLF +M + V A+ NL ++ NG +
Sbjct: 314 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLI 373
Query: 193 GV---------AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-----PETCE 238
+ A+ +F M ++++ S+ +I G + ++ A+ F +M P +
Sbjct: 374 DMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSL- 432
Query: 239 KTWNSIISV---LIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFEL 294
T+ S++ V L L K+ H + K+ S ++ + + +I Y + V A VFE
Sbjct: 433 LTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEE 492
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
M +D+ VWN M FG ++ EE LK + ++ S P+ TF +++T S+L +L G
Sbjct: 493 MNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHG 552
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
+Q H Q +K+ + V+NA++ MYA+CG+I+ A F+S D++ WNS+I A H
Sbjct: 553 QQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQH 612
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
G AE+AL +F M +P+ +TFV VLSACS+AG V+ G +F+ M + ++P + H
Sbjct: 613 GEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEH 671
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM 534
Y CVV LLGR G + EA + ++ IE + VW +LL ACRI N+++G+ A E +
Sbjct: 672 YACVVSLLGRSGKLFEAKEFIEKM---PIEPAAIVWRSLLSACRIAGNVELGKYAAEMAI 728
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
+P +SG Y++L+ ++ S G D K++ +M + V KEPG SWI++N+ +VF++ D
Sbjct: 729 STDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARD 788
Query: 595 SSH 597
++H
Sbjct: 789 TTH 791
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 144/565 (25%), Positives = 246/565 (43%), Gaps = 81/565 (14%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+ D F N +I +SD V A+ VFD M ++++TW+SM+S Y G +EAL VF
Sbjct: 59 QSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVD 118
Query: 109 MPLKDVVSWN-LVIGALVN-CQRMDLAESYFKEMG-------ARDVASWTIMVNGLVREG 159
+ K N V+ +++ C ++ + E + G +DV T +++ + G
Sbjct: 119 LQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNG 178
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
I EAR +FD++ K W +IAGY G V+ +LF +M + + +V
Sbjct: 179 NIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETN----------VVP 228
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
R + +++ M E E K+ H+Y+ + S NV++ +
Sbjct: 229 DRYVVSSVLSACSMLEFLEGG--------------KQIHAYVLRRGTEMDVSVVNVLIDF 274
Query: 280 F-EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ + V + K+F+ M +++ W MI G +N E +K F +M G PD
Sbjct: 275 YTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFAC 334
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
TSVLT C L+ GRQ+HA IK V N +I MYA+ + A F +
Sbjct: 335 TSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAE 394
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL--------------- 443
++IS+N++I G + +ALELF MR+ F P +TFV +L
Sbjct: 395 QNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQI 454
Query: 444 -----------------------SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
S CSY V R+ F+ M K + + +
Sbjct: 455 HGLIIKFGVSLDLFAGSALIDVYSKCSY---VKDARHVFEEMNEKDIVVWNAMFFGYTQH 511
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
L +EA+ L + ++ + + + AL+ A +++ G+ +++++ +
Sbjct: 512 LEN-----EEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDF 566
Query: 541 SG-VYLILTEMYLSCGRREDAKRIF 564
V L +MY CG E+A+++F
Sbjct: 567 CPFVTNALVDMYAKCGSIEEARKMF 591
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 109/264 (41%), Gaps = 48/264 (18%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P F ++L + + + IH Q I T ++N +I + ++ + +A +
Sbjct: 25 PKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVV 84
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELF-ERMRLTDFKPDDITFVGVLSACSYAGL 451
F +P ++I+W+S++ + GY+E+AL +F + R + P++ V+ AC+ G+
Sbjct: 85 FDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGV 144
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
V++G + F Q T ++D + G I+EA + +++ E + W
Sbjct: 145 VEKGAQLHGFVVRSGFDQDVYVG-TSLIDFYSKNGNIEEARLVFDQLS----EKTAVTWT 199
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
+ IAG Y CGR + +FAQM+E
Sbjct: 200 TI--------------IAG--------------------YTKCGRSAVSLELFAQMRETN 225
Query: 572 VKKE--------PGCSWIQINDGG 587
V + CS ++ +GG
Sbjct: 226 VVPDRYVVSSVLSACSMLEFLEGG 249
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 185/641 (28%), Positives = 328/641 (51%), Gaps = 29/641 (4%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ + E +F+ MP+++ VTW ++ G M LF +M ++ A
Sbjct: 146 MKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFA 205
Query: 61 GLMQSDNVQGAKEVFDGMEVRDV--------VTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++ + QGA ++ + + V NS+++ Y GL+++A VF+ M +
Sbjct: 206 SVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR 265
Query: 113 DVVSWNLVIGAL----VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
D+VSWN ++ L + + L MG +++ ++ ++ AR+L
Sbjct: 266 DMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLH 325
Query: 169 DKMPAKDVQ-AWNLMIA---GYLDNGCVGVAEDLFQ-KMHDRDLTSWKQLINGLVNSRRI 223
+ N+M A Y G + A ++F R++ SW +I+G + + I
Sbjct: 326 SCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDI 385
Query: 224 DAAISYFKQMPE----TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA-SWTNVIVG 278
A+ F +M E E T+++++ + + L + H+ + K Y +I T ++
Sbjct: 386 PLAVVLFSRMREDRVMPNEFTYSAMLKASL-SILPPQIHAQVIKTNYQHIPFVGTALLAS 444
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G A+ +F+++ +DV W+ M+ + E F +M G P+ T
Sbjct: 445 YSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTI 504
Query: 339 TSVLTICSDLPT--LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
+SV+ C+ P+ +D GRQ HA +IK + VS+A+++MY+R GNI SA + F
Sbjct: 505 SSVIDACA-CPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQ 563
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
D++SWNS+I G A HGY+ KA+E F +M + + D +TF+ V+ C++ GLV +G+
Sbjct: 564 TDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQ 623
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
YFD M + + P HY C+VDL R G +DE M+L IR VW LLGA
Sbjct: 624 QYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSL---IRDMPFPAGAMVWRTLLGA 680
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
CR+H N+++G+ + ++++ LEP++S Y++L+ +Y + G+ ++ + M VKKE
Sbjct: 681 CRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEA 740
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
GCSWIQI + H F++ D SHP ++ L ++ T ++++
Sbjct: 741 GCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQD 781
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 127/516 (24%), Positives = 235/516 (45%), Gaps = 43/516 (8%)
Query: 9 AQNLFDKMPQRDT-VTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS-- 65
A+ D++P+RD V N ++ Y + G + + F+ + + ++ ++++
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 66 ---DNVQGAKE----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
D V G + V G + +V S++ Y+ G + E + VF GMP K+VV+W
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNGLVREGRIVEARKLFDKMPAK 174
++ + Q + F M A + ++ +++ + +G A L ++ A+
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQG----ALDLGQRVHAQ 226
Query: 175 DVQ--------AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
V+ N ++ Y G V A+ +F M RD+ SW L+ GL + A
Sbjct: 227 SVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEA 286
Query: 227 ISYFKQ----MPETCEKTWNSIISV---LIRNGLVKEAHSYLEKYPYSNIAS-WTNVIVG 278
+ F + M + + T+ ++I + L + L ++ HS + K+ + + T +
Sbjct: 287 LQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADA 346
Query: 279 YFEMGEVGSAIKVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + GE+ A+ +F + T +R+V W +I G +N + F +M+E P+ T
Sbjct: 347 YSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFT 406
Query: 338 FTSVLTIC-SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
++++L S LP QIHAQ IK V A++ Y++ G+ + AL F +
Sbjct: 407 YSAMLKASLSILPP-----QIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMI 461
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL-VDQG 455
D+++W++++ A G E A LF +M + KP++ T V+ AC+ VDQG
Sbjct: 462 EQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQG 521
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
R F + KY + +V + R G ID A
Sbjct: 522 R-QFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA 556
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 133/268 (49%), Gaps = 6/268 (2%)
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+++ T+++ Y + G V I+VFE M ++V W ++ G + E + F +M+
Sbjct: 135 VSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRA 194
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
G P+ TF SVL+ + LDLG+++HAQ++K V N+++ MYA+CG ++
Sbjct: 195 EGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVED 254
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F+ + D++SWN+++ GL + +AL+LF R T K T+ V+ C+
Sbjct: 255 AKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCAN 314
Query: 449 AGLVDQGRYYFDC-MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
+ R C +K+ + L T + D + G + +A+N+ + VS
Sbjct: 315 LKQLALARQLHSCVLKHGFHLTGNV--MTALADAYSKCGELADALNIFSMTTGSRNVVS- 371
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVME 535
W A++ C + +I + + R+ E
Sbjct: 372 --WTAIISGCIQNGDIPLAVVLFSRMRE 397
>gi|356499342|ref|XP_003518500.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g29230-like [Glycine max]
Length = 446
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 159/409 (38%), Positives = 237/409 (57%), Gaps = 4/409 (0%)
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN 251
V A +F +M D+++ +W ++ V + +A F P+ WN I+S I
Sbjct: 10 VADAYKVFAEMRDKNVFAWTAVVAAHVACHDMVSARRLFDLAPQCDVVLWNVIVSGYIEL 69
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
G + A ++ P ++ SW V+ GY GEV +KVFE M R+V WN +I G
Sbjct: 70 GDMVAARELFDRMPDCDVMSWNTVLSGYANNGEVELFVKVFEEMPARNVYSWNGLIGGYV 129
Query: 312 ENDLGEEGLKFFVQMKESGPS-PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
N L +E L+ F +M G P++ T +VL+ CS L L++G+ +H A I
Sbjct: 130 RNGLFKEALECFKRMLVDGVVVPNDYTVVAVLSACSRLGDLEIGKWVHVYADSIGYKGNL 189
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
V NA+I MYA+CG I+ AL F + + DII+WN+II LA H +A AL LFE M+
Sbjct: 190 FVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINSLAMHXHAADALSLFEGMKRA 249
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
+PD +TFVG+LSAC++ GLV G +F M + Y + P+ HY C+VDLLGR GLI++
Sbjct: 250 GERPDGVTFVGILSACTHMGLVRNGFLHFQSMVDDYLIVPQIEHYGCMVDLLGRAGLINQ 309
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
A+++ +R +E +W ALLGACR + N+++ E+A +R++ELEPNN G +++L+ +
Sbjct: 310 AVDI---VRKMPMEPDVVIWAALLGACRXYKNVEMAELALQRLIELEPNNPGNFVMLSNI 366
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
Y GR +D R+ M++ G +K PGCS I ND F S D HP+
Sbjct: 367 YKDLGRSQDVARLKVAMRDTGFRKVPGCSVIGCNDSVVEFYSLDERHPE 415
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 170/356 (47%), Gaps = 25/356 (7%)
Query: 98 LIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR 157
+ +A +VF M K+V +W V+ A V C M A F DV W ++V+G +
Sbjct: 9 FVADAYKVFAEMRDKNVFAWTAVVAAHVACHDMVSARRLFDLAPQCDVVLWNVIVSGYIE 68
Query: 158 EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL 217
G +V AR+LFD+MP DV +WN +++GY +NG V + +F++M R++ SW LI G
Sbjct: 69 LGDMVAARELFDRMPDCDVMSWNTVLSGYANNGEVELFVKVFEEMPARNVYSWNGLIGGY 128
Query: 218 VNSRRIDAAISYFKQM-------PETCEKTWNSIISVLIRNG---LVKEAHSYLEKYPYS 267
V + A+ FK+M P + T +++S R G + K H Y + Y
Sbjct: 129 VRNGLFKEALECFKRMLVDGVVVPN--DYTVVAVLSACSRLGDLEIGKWVHVYADSIGYK 186
Query: 268 -NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
N+ +I Y + G + A+ VF+ + +D+ WN +I L + + L F M
Sbjct: 187 GNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINSLAMHXHAADALSLFEGM 246
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-----AMITMYA 381
K +G PD TF +L+ C+ + + G +H Q++ + + V M+ +
Sbjct: 247 KRAGERPDGVTFVGILSACTHMGLVRNGF-LHFQSMV---DDYLIVPQIEHYGCMVDLLG 302
Query: 382 RCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
R G I A+ +P+ D++ W +++ A Y + RL + +P++
Sbjct: 303 RAGLINQAVDIVRKMPMEPDVVIWAALLG--ACRXYKNVEMAELALQRLIELEPNN 356
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 162/374 (43%), Gaps = 50/374 (13%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDN 67
A+ LFD PQ D V WNV++ GY + G + A LF++MP+ D+ ++NTV++G +
Sbjct: 43 SARRLFDLAPQCDVVLWNVIVSGYIELGDMVAARELFDRMPDCDVMSWNTVLSGYANNGE 102
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN--LVIGALV 125
V+ +VF+ M R+V +WN +I GYV NGL EAL F M + VV N V+ L
Sbjct: 103 VELFVKVFEEMPARNVYSWNGLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAVLS 162
Query: 126 NCQRMDLAESYFKEMGARDVASWT-IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
C R +G ++ W + + + +G + L D
Sbjct: 163 ACSR----------LGDLEIGKWVHVYADSIGYKGNLFVGNALIDM-------------- 198
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----T 240
Y G + A D+F + +D+ +W +IN L A+S F+ M E+ T
Sbjct: 199 -YAKCGVIEKALDVFDGLDVKDIITWNTIINSLAMHXHAADALSLFEGMKRAGERPDGVT 257
Query: 241 WNSIISVLIRNGLVKEA----HSYLEKY-PYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
+ I+S GLV+ S ++ Y I + ++ G + A+ + M
Sbjct: 258 FVGILSACTHMGLVRNGFLHFQSMVDDYLIVPQIEHYGCMVDLLGRAGLINQAVDIVRKM 317
Query: 296 TTR-DVTVWNVMIFGL---GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
DV +W ++ ++ E L+ ++++ + P F + I
Sbjct: 318 PMEPDVVIWAALLGACRXYKNVEMAELALQRLIELEPNNP----GNFVMLSNIYK----- 368
Query: 352 DLGRQIHAQAIKIA 365
DLGR +K+A
Sbjct: 369 DLGRSQDVARLKVA 382
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 21/253 (8%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYN--TVIA 60
N ++ +F++MP R+ +WN +I GY +NG A+ F +M + N TV+A
Sbjct: 100 NGEVELFVKVFEEMPARNVYSWNGLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVA 159
Query: 61 GLMQSDNVQGAKEVFDGMEVR--------DVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
L + G E+ + V ++ N++I Y G+I++AL VF G+ +K
Sbjct: 160 VLSACSRL-GDLEIGKWVHVYADSIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVK 218
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVN-----GLVREGRIVE 163
D+++WN +I +L A S F+ M G R D ++ +++ GLVR G +
Sbjct: 219 DIITWNTIINSLAMHXHAADALSLFEGMKRAGERPDGVTFVGILSACTHMGLVRNGFLHF 278
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH-DRDLTSWKQLINGLVNSRR 222
+ D + ++ + M+ G + A D+ +KM + D+ W L+ +
Sbjct: 279 QSMVDDYLIVPQIEHYGCMVDLLGRAGLINQAVDIVRKMPMEPDVVIWAALLGACRXYKN 338
Query: 223 IDAAISYFKQMPE 235
++ A +++ E
Sbjct: 339 VEMAELALQRLIE 351
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 203/650 (31%), Positives = 318/650 (48%), Gaps = 93/650 (14%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTY------ 55
+A+N+F ++ + WN MIRG+ G D A+ + +M P++ F Y
Sbjct: 99 DAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACG 158
Query: 56 --NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
N+V G + D +Q F G E+ DV +S+I Y NG I +A +F MP KD
Sbjct: 159 GLNSVALGRVVHDKIQ-----FMGFEL-DVFVGSSLIKFYSENGCIHDARYLFDRMPSKD 212
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARD-------------VASWTIMVN------G 154
V WN+++ V D A F EM + V + IM+N G
Sbjct: 213 GVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHG 272
Query: 155 LVREG---------------------RIVE-ARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
LV R VE ARK+FD+ D+ MI+GY+ NG
Sbjct: 273 LVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMN 332
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A ++F+ W L+ R +++ +P + L
Sbjct: 333 NNALEIFR---------W------LLQERMRANSVTLASVLPAC---------AGLAALT 368
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
L KE H ++ K + + I+ Y + G + A + F ++ +D WN MI
Sbjct: 369 LGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCS 428
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+N EE + F QM +G D + ++ L+ C++LP L G++IHA ++ A
Sbjct: 429 QNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLF 488
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
+A+I MY++CGN+ A F ++ + +SWNSII HG + +L LF M
Sbjct: 489 AESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDG 548
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
+PD +TF+ ++SAC +AG VD+G +YF CM + + R HY C+VDL GR G ++EA
Sbjct: 549 IQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEA 608
Query: 492 MNLLNEIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
++N + SP VWG LLGACR+H N+++ E+A + +L+P NSG Y++L+
Sbjct: 609 FGMINS-----MPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSN 663
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
++ + G+ E +I + MKE GV+K PGCSWI +N+ H+F++ D SHP+
Sbjct: 664 VHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQ 713
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 201/487 (41%), Gaps = 68/487 (13%)
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLA-ESYFKEMGA---RD 144
++ YV G +A +F+ + L WN +I + D A YFK +G D
Sbjct: 87 LLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPD 146
Query: 145 VASWTIMVNGLVREGRIVEARKLFDKMP----AKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
++ ++ + R + DK+ DV + +I Y +NGC+ A LF
Sbjct: 147 KYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFD 206
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI----------- 249
+M +D W ++NG V + D A F +M T E NS+ +
Sbjct: 207 RMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRT-ETNPNSVTFACVLSVCASEIMIN 265
Query: 250 ----RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV 305
+GLV + ++ P +N + ++ YF+ +V A K+F+ T D+ V
Sbjct: 266 FGSQLHGLVVSSGLEMDS-PVANTFALIDI---YFKCRDVEMARKIFDQRTPVDIVVCTA 321
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
MI G N + L+ F + + ++ T SVL C+ L L LG+++H +K
Sbjct: 322 MISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNG 381
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
V +A++ MYA+CG + A F + D + WNS+I + +G E+A++LF
Sbjct: 382 HGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFR 441
Query: 426 RMRLTDFKPDDITFVGVLSAC-----------------------------------SYAG 450
+M + K D ++ LSAC S G
Sbjct: 442 QMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCG 501
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
+D FD M+ K + ++ G G + +++NL + + DGI+ +
Sbjct: 502 NLDLACRVFDTMEEK-----NEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTF 556
Query: 511 GALLGAC 517
A++ AC
Sbjct: 557 LAIISAC 563
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 167/438 (38%), Gaps = 94/438 (21%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERD---------- 51
N I +A+ LFD+MP +D V WNVM+ GY KNG DNA +F +M +
Sbjct: 194 ENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFAC 253
Query: 52 ---------MFTYNTVIAGLMQSD----------------------NVQGAKEVFDGMEV 80
M + + + GL+ S +V+ A+++FD
Sbjct: 254 VLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTP 313
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVF---------------------------------- 106
D+V +MISGYV NG+ + AL +F
Sbjct: 314 VDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKEL 373
Query: 107 HGMPLKDVVSWNLVIGALV-----NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRI 161
HG LK+ + +G+ + C R+DLA F + +D W M+ + G+
Sbjct: 374 HGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKP 433
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD--------RDLTSWKQL 213
EA LF +M + + I+ L A +++H DL + L
Sbjct: 434 EEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESAL 493
Query: 214 INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA----HSYLEKYPYSNI 269
I+ +D A F M E E +WNSII+ +G +K++ H L +
Sbjct: 494 IDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDH 553
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG-LKFFVQMKE 328
++ +I G+V I F MT + + + + G G L M
Sbjct: 554 VTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMIN 613
Query: 329 SGP-SPDNATFTSVLTIC 345
S P SPD + ++L C
Sbjct: 614 SMPFSPDAGVWGTLLGAC 631
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 49/123 (39%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
S+L C+D L GRQ HAQ + + ++ MY CG A F +
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ WN +I G G + AL + +M PD TF V+ AC V GR
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 458 YFD 460
D
Sbjct: 169 VHD 171
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 207/737 (28%), Positives = 329/737 (44%), Gaps = 135/737 (18%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R A +FD MP RDTV+WN M+ Y G A L MP+ D+ ++N +++G
Sbjct: 78 RCGGAAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSG 137
Query: 62 LMQ------------------------------------SDNVQG----AKEVFDGMEVR 81
Q D G A V G+E+
Sbjct: 138 YCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEM- 196
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI-GALVNCQRM---------- 130
DV ++++ Y +++AL FHGM ++ VSW VI G + N Q M
Sbjct: 197 DVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCRCK 256
Query: 131 ---------DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
L K + D T +V+ + +V+AR+ F +P V+ N
Sbjct: 257 AITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNA 316
Query: 182 MIAGYLDNGCVGVAEDLFQ------------------------KMHDRDLTSWKQLINGL 217
M+ G + G A LFQ K D D+ +++
Sbjct: 317 MMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDVDVCVRNAILDLY 376
Query: 218 VNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN-------------------------G 252
+ + A F++M + +WN+II+ L +N G
Sbjct: 377 GKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYG 436
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVG--------------YFEMGEVGSAIKVFELMTTR 298
V +A + L+ Y + + G Y + G + A+K+ + + +
Sbjct: 437 SVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQ 496
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
++ WN +I G N EE KFF +M + G PD+ T+ +VL C++L T++LG+QIH
Sbjct: 497 ELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIH 556
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
Q IK +S+ ++ MYA+CGN+ + L F V D +SWN++ICG A HG
Sbjct: 557 GQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQGF 616
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
+ALE+FER + + P+ TFV VL ACS+ GL+D G YF M ++Y L+P+ H+ C+
Sbjct: 617 EALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQLEHFACM 676
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
EA+ IR+ +E +W LL C+I +++V E A V+ L+P
Sbjct: 677 GP--------QEALKF---IRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDP 725
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
++S VY++L+ +Y G+ D R M++ +KKEPGCSWI++ H FL G+ HP
Sbjct: 726 DDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLVGEKVHP 785
Query: 599 KFHRLRYLLNLLHTEIE 615
+ + +LN L E++
Sbjct: 786 RSREVYEMLNNLICEMK 802
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 199/491 (40%), Gaps = 89/491 (18%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
MF N ++ + A VFD M RD V+WN+M++ Y G A + MP
Sbjct: 66 MFVSNCLLQMYARCGGAAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPD 125
Query: 112 KDVVSWNLVIGALVNCQR----------MDLAES-----------YFKEMGARDVASWTI 150
DVVSWN ++ CQR +++A K G D + +
Sbjct: 126 PDVVSWNALLSGY--CQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGV 183
Query: 151 MVNGL---------VREGRIV-----------EARKLFDKMPAKDVQAWNLMIAGYLDN- 189
++ L VR G + +A F M ++ +W +IAG + N
Sbjct: 184 QIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNE 243
Query: 190 ---------------GCVGVAEDLFQKMHDRDLTSWKQLINGLVN-----SRRIDAAISY 229
C+ A L +S + + +V+ +DA ++
Sbjct: 244 QYMRGLELLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAF 303
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM------- 282
F +P +T N+++ L+R GL EA + S I + G F
Sbjct: 304 FG-LPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGF 362
Query: 283 --------------GEVGSAIK---VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
G+ + ++ VF+ M RD WN +I L +N+ E+ + +
Sbjct: 363 DVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNE 422
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M SG D+ T+ SVL C+ L +L+ G +H +AIK VS+ ++ MY +CG
Sbjct: 423 MLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGM 482
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
I AL + +++SWNSII G + + +E+A + F M KPD T+ VL +
Sbjct: 483 ITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDS 542
Query: 446 CSYAGLVDQGR 456
C+ ++ G+
Sbjct: 543 CANLATIELGK 553
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 131/331 (39%), Gaps = 30/331 (9%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N ++ + R G AH + P+ + SW ++ Y MG+ G A + +M DV
Sbjct: 70 NCLLQMYARCGGAAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVV 129
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN ++ G + + + + ++M G +PD T +L C L L LG QIHA A
Sbjct: 130 SWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALA 189
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
+K +A++ MY +C +++ AL F + + +SW ++I G + + L
Sbjct: 190 VKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGL 249
Query: 422 ELFERMRL----------------TDFKPDDITFVGVLSACSYA-GLVDQGRYYFDCMKN 464
EL R + F D + ++ + A LVD R +F
Sbjct: 250 ELLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGL--- 306
Query: 465 KYFLQPRSAHYTCVVDLLG--RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
P TC ++G R GL EAM L + GI + AC
Sbjct: 307 -----PNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKG 361
Query: 523 IKVGEIAGERVMELEPNNSGV---YLILTEM 550
V +++L + YL+ EM
Sbjct: 362 FDVDVCVRNAILDLYGKCKALVEAYLVFQEM 392
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 97/251 (38%), Gaps = 55/251 (21%)
Query: 331 PSPD------NATFTSVLTICSDL--PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
P+P ATF+ V +C+ L G+ HA+ + VSN ++ MYAR
Sbjct: 19 PTPAQAAFLATATFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYAR 78
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CG A F ++P D +SWN+++ A+ G A L M PD +++ +
Sbjct: 79 CGGAAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMP----DPDVVSWNAL 134
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
LS G +G + DL+G L E+ G
Sbjct: 135 LS-----GYCQRGMFR---------------------DLVG----------LSIEMARCG 158
Query: 503 IEVSPTVWGALLGACRIHNNIKVG----EIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
+ T LL AC +++ +G +A + +E++ L +MY C E
Sbjct: 159 VAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSA---LVDMYGKCRSLE 215
Query: 559 DAKRIFAQMKE 569
DA F M E
Sbjct: 216 DALHFFHGMGE 226
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 190/641 (29%), Positives = 311/641 (48%), Gaps = 52/641 (8%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNA--MCLFNQM------PERDMFT 54
+ + A +LFD++P D T+N +IR Y + A + L+ +M P F
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129
Query: 55 YNTVIAGLMQSDNVQGA---KEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+ + + A + G++ D+ +++ YV + +A +F MP
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQA-DLFVSTALLDMYVKCACLPDAAHIFATMPA 188
Query: 112 KDVVSWNLVIG----------ALVNCQRMDLAESYFKEMGARDVASWTIMVN-GLVREGR 160
+D+V+WN ++ A+ + M + + + VA ++ G + +G
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248
Query: 161 IVEARKLFDKMPAKDVQAWNL---------MIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
V A ++ + + L ++ Y G + A +F M R+ +W
Sbjct: 249 SVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308
Query: 212 QLINGLVNSRRIDAAISYFKQMPET--CEKTWNSIISVL--------IRNGLVKEAHSYL 261
LI G V R+ A FK M C + SI S L +R G ++ H+ L
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMG--EQLHALL 366
Query: 262 EKYP-YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
K ++++ + +++ Y + G + AI +F+ M +D ++ ++ G +N EE
Sbjct: 367 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAF 426
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F +M+ PD AT S++ CS L L GR H I T++ NA+I MY
Sbjct: 427 LVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMY 486
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
A+CG I + F+ +P DI+SWN++I G HG ++A LF M F PD +TF+
Sbjct: 487 AKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFI 546
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE--I 498
+LSACS++GLV +G+++F M++ Y L PR HY C+VDLL R G +DEA + +
Sbjct: 547 CLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPL 606
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
RAD VW ALLGACR++ NI +G+ + EL P +G +++L+ +Y + GR +
Sbjct: 607 RAD-----VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFD 661
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
+A + K G KK PGCSWI+IN H F+ GD SHP+
Sbjct: 662 EAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 702
>gi|297823509|ref|XP_002879637.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325476|gb|EFH55896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 176/612 (28%), Positives = 302/612 (49%), Gaps = 50/612 (8%)
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD----- 113
IA L +S + A+++FD M RD V WN+M++ Y GL EA+ +F + D
Sbjct: 11 IASLAKSGRITSARQMFDEMTDRDTVAWNTMLTSYSHLGLHQEAIALFTQLRFSDSKPDD 70
Query: 114 -------------------------VVSWNLVIGALVNCQRMDL---------AESYFKE 139
V+ + VN +D+ A F++
Sbjct: 71 YSFTAILSTCGSLGNVRLGRKIQSLVIRSGFCASSPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 140 M--GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG----CVG 193
M +R+ +W ++ + + A +F +MP + AWN+MI+G+ G C+
Sbjct: 131 MCCHSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVPFAWNIMISGHAQCGKIESCLR 190
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE----TCEKTWNSIISVLI 249
+ +++ + + D ++ L+N +S + M + + NS++S
Sbjct: 191 LFKEMLESEFEPDCFTFSSLMNACADSSNVVYGWMVHAVMVRNGWYSAVEAKNSVLSFYA 250
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
+ G + LE SW ++I ++GE A++VF L +++ W MI G
Sbjct: 251 KLGCKDDVMRELESIEVLTQVSWNSIIDACVKVGETDKALEVFRLAPEKNIVTWTTMIAG 310
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
G N GE+ L+FFV+M +SG D+ + +VL CS L L G+ IH I +
Sbjct: 311 YGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGY 370
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
V NA++ +YA+CG+I+ + F + D++SWN+++ HG A++ALEL++ M
Sbjct: 371 AYVGNALVNLYAKCGDIKESNRAFGDIANKDLVSWNTMLFAFGVHGLADQALELYDNMIA 430
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+ KPD++TF+G+L+ CS++GLV++G F+ M Y + H TC++D+ GR G +
Sbjct: 431 SGIKPDNVTFIGLLTTCSHSGLVEKGCAIFESMVKDYGIPLEVDHVTCMIDMFGRGGHLA 490
Query: 490 EAMNLLNEIRADGIEVS-PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
EA +L + I S + W ALLGAC H + ++G + + EP+ +++L+
Sbjct: 491 EAKDLATTYNSLVINASNNSSWEALLGACSTHWHTELGREVSKVLKIAEPSEELSFVLLS 550
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
+Y S GR ++A+ + +M E G++K PGCSWI++ + F+ G SSHP+ L LN
Sbjct: 551 NLYCSSGRWKEAEEVRREMVERGMRKTPGCSWIEVGNRVSTFVVGGSSHPRLEELSETLN 610
Query: 609 LLHTEIEREILF 620
L E+ F
Sbjct: 611 CLQHEMRNPETF 622
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 146/338 (43%), Gaps = 45/338 (13%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T+ I + G + SA ++F+ MT RD WN M+ L +E + F Q++ S
Sbjct: 8 TSKIASLAKSGRITSARQMFDEMTDRDTVAWNTMLTSYSHLGLHQEAIALFTQLRFSDSK 67
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN------- 385
PD+ +FT++L+ C L + LGR+I + I+ + V+N++I MY +C +
Sbjct: 68 PDDYSFTAILSTCGSLGNVRLGRKIQSLVIRSGFCASSPVNNSLIDMYGKCSDTLSANKV 127
Query: 386 --------------------------IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
++AL F +P +WN +I G A G E
Sbjct: 128 FRDMCCHSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVPFAWNIMISGHAQCGKIES 187
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
L LF+ M ++F+PD TF +++AC+ + V G M + A + V+
Sbjct: 188 CLRLFKEMLESEFEPDCFTFSSLMNACADSSNVVYGWMVHAVMVRNGWYSAVEAKNS-VL 246
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI-AGERVMELEP 538
+ G D+ M L I ++ W +++ AC +KVGE V L P
Sbjct: 247 SFYAKLGCKDDVMRELESIEV----LTQVSWNSIIDAC-----VKVGETDKALEVFRLAP 297
Query: 539 NNSGV-YLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
+ V + + Y G E A R F +M ++GV +
Sbjct: 298 EKNIVTWTTMIAGYGRNGDGEQALRFFVEMMKSGVDSD 335
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 197/460 (42%), Gaps = 81/460 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
M + + A ++F +MP+R WN+MI G+ + G +++ + LF +M E D FT++
Sbjct: 149 MNAEQFEAALDVFVEMPKRVPFAWNIMISGHAQCGKIESCLRLFKEMLESEFEPDCFTFS 208
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRD-----VVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+++ S NV V M VR+ V NS++S Y G D+ +R + +
Sbjct: 209 SLMNACADSSNVVYGWMVHAVM-VRNGWYSAVEAKNSVLSFYAKLGCKDDVMRELESIEV 267
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
VSWN +I A V D A F+ +++ +WT M+ G R G +A + F +M
Sbjct: 268 LTQVSWNSIIDACVKVGETDKALEVFRLAPEKNIVTWTTMIAGYGRNGDGEQALRFFVEM 327
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
V + + L + C G+A L ++I+G +
Sbjct: 328 MKSGVDSDHFAYGAVL-HACSGLA-----------LLGHGKMIHGCL------------- 362
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIK 290
H + Y Y N +V Y + G++ + +
Sbjct: 363 -------------------------IHCGFQGYAYVG-----NALVNLYAKCGDIKESNR 392
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
F + +D+ WN M+F G + L ++ L+ + M SG PDN TF +LT CS
Sbjct: 393 AFGDIANKDLVSWNTMLFAFGVHGLADQALELYDNMIASGIKPDNVTFIGLLTTCSHSGL 452
Query: 351 LDLGRQIHAQAIK-----IARNQFTTVSNAMITMYARCGNIQSA---LLEFSSVPIH--D 400
++ G I +K + + T MI M+ R G++ A ++S+ I+ +
Sbjct: 453 VEKGCAIFESMVKDYGIPLEVDHVT----CMIDMFGRGGHLAEAKDLATTYNSLVINASN 508
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
SW +++ + H + E E+ + +++ + ++++FV
Sbjct: 509 NSSWEALLGACSTHWHTELGREVSKVLKIAE-PSEELSFV 547
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 168/429 (39%), Gaps = 78/429 (18%)
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
T + L + GRI AR++FD+M +D AWN M+ Y G A LF ++ D
Sbjct: 8 TSKIASLAKSGRITSARQMFDEMTDRDTVAWNTMLTSYSHLGLHQEAIALFTQLRFSD-- 65
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN-----SIISVLIRNGLVKEA---HSY 260
S+ D + F + TC N I S++IR+G + +S
Sbjct: 66 -----------SKPDDYS---FTAILSTCGSLGNVRLGRKIQSLVIRSGFCASSPVNNSL 111
Query: 261 LEKYPYS------------------NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
++ Y N +W +++ Y + +A+ VF M R
Sbjct: 112 IDMYGKCSDTLSANKVFRDMCCHSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVPFA 171
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
WN+MI G + E L+ F +M ES PD TF+S++ C+D + G +HA +
Sbjct: 172 WNIMISGHAQCGKIESCLRLFKEMLESEFEPDCFTFSSLMNACADSSNVVYGWMVHAVMV 231
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSV-------------------------- 396
+ N++++ YA+ G + E S+
Sbjct: 232 RNGWYSAVEAKNSVLSFYAKLGCKDDVMRELESIEVLTQVSWNSIIDACVKVGETDKALE 291
Query: 397 -----PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
P +I++W ++I G +G E+AL F M + D + VL ACS L
Sbjct: 292 VFRLAPEKNIVTWTTMIAGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLAL 351
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
+ G+ C+ + F Q + +V+L + G I E+ +I + W
Sbjct: 352 LGHGKMIHGCLIHCGF-QGYAYVGNALVNLYAKCGDIKESNRAFGDIANKDL----VSWN 406
Query: 512 ALLGACRIH 520
+L A +H
Sbjct: 407 TMLFAFGVH 415
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 174/503 (34%), Positives = 276/503 (54%), Gaps = 26/503 (5%)
Query: 124 LVNCQRMDL--AESYFKEMGARDVASWTI---------MVNGLVREGRIVEARKLFDKMP 172
L +C R DL A M R V + +I + +G VREG+ V R +F
Sbjct: 258 LNHCYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVH-RHIFSNGY 316
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK- 231
N++I Y+ + A+ LF KM +R++ SW +I+ N++ D A+
Sbjct: 317 HPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAF 376
Query: 232 -----QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEV 285
MP T++S++ R +K+ HS++ K S++ + +I Y +MGE+
Sbjct: 377 MFRDGVMPNMF--TFSSVLRACERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGEL 434
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A+KVF M T D VWN +I ++ G+E L + M+ G D +T TSVL C
Sbjct: 435 LEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRAC 494
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
+ L L+LGRQ H +K +Q ++NA++ MY +CG+++ A F+ + D+ISW+
Sbjct: 495 TSLSLLELGRQAHVHVLKF--DQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWS 552
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNK 465
++I GLA +G++ +AL LFE M++ KP+ IT +GVL ACS+AGLV++G YYF M N
Sbjct: 553 TMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNL 612
Query: 466 YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKV 525
Y + P HY C++DLLGR +D+ + L++E+ E W LL ACR N+ +
Sbjct: 613 YGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNC---EPDVVTWRTLLDACRARQNVDL 669
Query: 526 GEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
A + +++L+P ++G Y++L+ +Y R D + MK+ G++KEPGCSWI++N
Sbjct: 670 ATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNK 729
Query: 586 GGHVFLSGDSSHPKFHRLRYLLN 608
H F+ GD SHP+ + LN
Sbjct: 730 QIHAFILGDKSHPQIDEINRQLN 752
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 178/442 (40%), Gaps = 56/442 (12%)
Query: 37 LDNAMCLFNQMPER----DMFTYNTVIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWN 87
L +AM + + M R D TY+ +I + V+ K V +G + +T N
Sbjct: 266 LPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLT-N 324
Query: 88 SMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVAS 147
+I+ YV L++EA +F MP ++VVSW +I A N Q D A M V
Sbjct: 325 ILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMP 384
Query: 148 WTIMVNGLVRE-GRIVEARKLFDKMPA----KDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
+ ++R R+ + ++L + DV + +I Y G + A +F++M
Sbjct: 385 NMFTFSSVLRACERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREM 444
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN-------GLVK 255
D W +I D A+ +K M S ++ ++R L +
Sbjct: 445 MTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGR 504
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
+AH ++ K+ I + ++ Y + G + A +F M +DV W+ MI GL +N
Sbjct: 505 QAHVHVLKFDQDLILN-NALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGF 563
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
E L F MK GP P++ T VL CS HA + F +++N
Sbjct: 564 SMEALNLFESMKVQGPKPNHITILGVLFACS-----------HAGLVNEGWYYFRSMNN- 611
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
+Y I + C L G AEK ++ + + + +PD
Sbjct: 612 ---LYG----IDPGREHYG--------------CMLDLLGRAEKLDDMVKLIHEMNCEPD 650
Query: 436 DITFVGVLSACSYAGLVDQGRY 457
+T+ +L AC VD Y
Sbjct: 651 VVTWRTLLDACRARQNVDLATY 672
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 125/282 (44%), Gaps = 35/282 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF------NQMPERDMFTYNTVI 59
++EAQ LFDKMP+R+ V+W MI Y D AM L MP +MFT+++V
Sbjct: 336 LEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMP--NMFTFSSV- 392
Query: 60 AGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
L + + K++ G+E DV +++I Y G + EAL+VF M D
Sbjct: 393 --LRACERLYDLKQLHSWIMKVGLE-SDVFVRSALIDVYSKMGELLEALKVFREMMTGDS 449
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMG----ARDVASWTIMVNG-----LVREGRIVEAR 165
V WN +I A D A +K M D ++ T ++ L+ GR
Sbjct: 450 VVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVH 509
Query: 166 KL-FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
L FD +D+ N ++ Y G + A+ +F +M +D+ SW +I GL +
Sbjct: 510 VLKFD----QDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSM 565
Query: 225 AAISYFKQM----PETCEKTWNSIISVLIRNGLVKEAHSYLE 262
A++ F+ M P+ T ++ GLV E Y
Sbjct: 566 EALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFR 607
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
+++A+ +F++M ++D ++W+ MI G +NGF A+ LF M P+ + T V+
Sbjct: 533 LEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFA 592
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGL-----IDEALRVFHGMPLK-DVV 115
+ V F M + G + + L +D+ +++ H M + DVV
Sbjct: 593 CSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVV 652
Query: 116 SWNLVIGALVNCQRMDLAESYFKE---MGARDVASWTIMVNGLVREGR---IVEARKLFD 169
+W ++ A Q +DLA KE + +D ++ ++ N R + E R+
Sbjct: 653 TWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMK 712
Query: 170 K 170
K
Sbjct: 713 K 713
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM 78
+D + N ++ Y K G L++A +FN+M ++D+ +++T+IAGL Q+ A +F+ M
Sbjct: 515 QDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESM 574
Query: 79 EVRDVVTWNSMISG--YVCN--GLIDEALRVFHGM-------PLKDVVSWNLVIGALVNC 127
+V+ + I G + C+ GL++E F M P ++ + ++ L
Sbjct: 575 KVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGRE--HYGCMLDLLGRA 632
Query: 128 QRMDLAESYFKEMGAR-DVASWTIMVNG 154
+++D EM DV +W +++
Sbjct: 633 EKLDDMVKLIHEMNCEPDVVTWRTLLDA 660
>gi|297794367|ref|XP_002865068.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
gi|297310903|gb|EFH41327.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
lyrata]
Length = 659
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 184/625 (29%), Positives = 316/625 (50%), Gaps = 50/625 (8%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFK--NGF----LDNAMCLFNQMPERDMFTYNTVIAGL 62
A++LFD+MP RD V+W +I GY N F L +A+ LF+ D + +
Sbjct: 39 ARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSAL-LFDPAVSPDTSVLSVALKAC 97
Query: 63 MQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
QS N+ + + F + V ++++ Y+ G ID+ R+F M ++ V+W
Sbjct: 98 GQSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQFRNTVTWT 157
Query: 119 LVIGALVNCQRMDLAESYFKEM----GARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
++ +V R +YF EM G D ++ + R ++ +++ + +
Sbjct: 158 AIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKACARLRQVKYGKEIHTHVIVR 217
Query: 175 DVQAW----NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
A N +I Y + G + LF+ M +RD+ SW LI+ + + A++ F
Sbjct: 218 GSDASLCVVNSLINMYTECGEMHDGVHLFESMSERDVFSWTTLIDAYSQMGQEEKAVATF 277
Query: 231 KQMPETCEKT--WNSII---SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEV 285
++ E +T W S+ + N ++K Y G++
Sbjct: 278 LKI-EIFRRTSQWTYFCLGDSLSVSNSMMKM----------------------YSTCGKL 314
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
SA +F+ M RD+ W+ +I G + LGEE F M+++GP P + S+L++
Sbjct: 315 DSASVLFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFSWMRQAGPKPTDPALASLLSVS 374
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
+ L+ GRQ+HA A+ + Q +T+ +A+I MY++CG+I+ A F DI+S
Sbjct: 375 GTMAVLEQGRQVHALALYLGLEQNSTIRSALINMYSKCGSIEEASKIFEETDTDDIVSLT 434
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNK 465
++I G A HG ++A++LFE+ +PD +TF+ VL+ACS++G +D G YF+ M+++
Sbjct: 435 AMINGYAEHGNTKEAIDLFEKSLKVGLRPDTVTFISVLTACSHSGQLDLGFRYFNLMQDE 494
Query: 466 YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKV 525
Y ++P HY C+VDLL R G + +A ++NE+ +V VW LL AC+ + +
Sbjct: 495 YNIRPVKEHYGCMVDLLCRAGRLSDAEKMINEMPWKKDDV---VWTTLLNACKAKGDTER 551
Query: 526 GEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
G A ER++EL+P + ++ L +Y S G+ E+A + MK GV K PG S I+I D
Sbjct: 552 GRRAAERILELDPTSETAFVTLANIYSSTGKLEEAAHVRKAMKSKGVIKVPGWSSIKIMD 611
Query: 586 GGHVFLSGDSSHPKFHRLRYLLNLL 610
F+SG SH + + +L+L+
Sbjct: 612 RASTFVSGSQSHSQSEDIYSILDLV 636
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 189/443 (42%), Gaps = 61/443 (13%)
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
V +VR AR LFD+MP +D+ +W +I GY+ A + F+ ++
Sbjct: 27 VEKIVRISNQGAARHLFDQMPHRDIVSWTAIINGYV------TAANSFEALN-------- 72
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN-------GLVKEAHSYLEKY 264
L ++ D A+S P+T S++SV ++ G + H+Y K
Sbjct: 73 -----LFSALLFDPAVS-----PDT------SVLSVALKACGQSSNIGYGESLHAYAFKT 116
Query: 265 P-YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
+++ TN++ Y G++ ++F M R+ W ++ G+ E +EGL +F
Sbjct: 117 SLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQFRNTVTWTAIVSGMVEAGRHKEGLTYF 176
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
+M S D+ F + L C+ L + G++IH I + V N++I MY C
Sbjct: 177 SEMSRSKGLSDDFAFATALKACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTEC 236
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA------LELFERM-RLTDFKPDD 436
G + + F S+ D+ SW ++I + G EKA +E+F R + T F D
Sbjct: 237 GEMHDGVHLFESMSERDVFSWTTLIDAYSQMGQEEKAVATFLKIEIFRRTSQWTYFCLGD 296
Query: 437 ITFV--GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
V ++ S G +D F M+ + + ++ ++ + GL +E
Sbjct: 297 SLSVSNSMMKMYSTCGKLDSASVLFQGMRRRDIIT-----WSTIIGGYSQAGLGEEVFMC 351
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-----PNNSGVYLILTE 549
+ +R G + + +LL + + V E G +V L NS + L
Sbjct: 352 FSWMRQAGPKPTDPALASLLS---VSGTMAVLE-QGRQVHALALYLGLEQNSTIRSALIN 407
Query: 550 MYLSCGRREDAKRIFAQMKENGV 572
MY CG E+A +IF + + +
Sbjct: 408 MYSKCGSIEEASKIFEETDTDDI 430
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 200/488 (40%), Gaps = 47/488 (9%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYN 56
MR +I + +F +M R+TVTW ++ G + G + F++M D F +
Sbjct: 133 MRTGKIDKGCRIFTEMQFRNTVTWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFA 192
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
T + + V+ KE+ + VR + NS+I+ Y G + + + +F M +
Sbjct: 193 TALKACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHLFESMSER 252
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKM 171
DV SW +I A + + A + F ++ R + WT G
Sbjct: 253 DVFSWTTLIDAYSQMGQEEKAVATFLKIEIFRRTSQWTYFCLG----------------- 295
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS---RRIDAAIS 228
+ N M+ Y G + A LFQ M RD+ +W +I G + + S
Sbjct: 296 --DSLSVSNSMMKMYSTCGKLDSASVLFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFS 353
Query: 229 YFKQM-PETCEKTWNSIISV-----LIRNGLVKEAHS---YLEKYPYSNIASWTNVIVGY 279
+ +Q P+ + S++SV ++ G ++ H+ YL S I S +I Y
Sbjct: 354 WMRQAGPKPTDPALASLLSVSGTMAVLEQG--RQVHALALYLGLEQNSTIRS--ALINMY 409
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G + A K+FE T D+ MI G E+ +E + F + + G PD TF
Sbjct: 410 SKCGSIEEASKIFEETDTDDIVSLTAMINGYAEHGNTKEAIDLFEKSLKVGLRPDTVTFI 469
Query: 340 SVLTICSDLPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP- 397
SVLT CS LDLG R + + M+ + R G + A + +P
Sbjct: 470 SVLTACSHSGQLDLGFRYFNLMQDEYNIRPVKEHYGCMVDLLCRAGRLSDAEKMINEMPW 529
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
D + W +++ G E+ ER+ D + FV + + S G +++ +
Sbjct: 530 KKDDVVWTTLLNACKAKGDTERGRRAAERILELD-PTSETAFVTLANIYSSTGKLEEAAH 588
Query: 458 YFDCMKNK 465
MK+K
Sbjct: 589 VRKAMKSK 596
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 254/444 (57%), Gaps = 19/444 (4%)
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
M A+ V WN M++GY G A+ LF M +R++ +W ++ G + ++AA YF
Sbjct: 69 MYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYF 128
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY--PYSNIASWTNVIVGYFEMGEVGSA 288
MPE +WN+++S +NGL +EA ++ Y N +W +I Y +G++ SA
Sbjct: 129 DCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSA 188
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP-SPDNATFTSVLTICSD 347
K+F M R+V WN MI G +N ++ F +M + +PD T SV++ C
Sbjct: 189 RKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGH 248
Query: 348 LPTLDLG----RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
L L+LG R + IK++ + NAMI MY+RCG+++ A F + D++S
Sbjct: 249 LGALELGNWVVRFLTENQIKLS----ISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVS 304
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
+N++I G A HG+ +A+ L M+ +PD +TF+GVL+ACS+AGL+++GR F+ +K
Sbjct: 305 YNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK 364
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
+ P HY C+VDLLGR G +++A + + +E V+G+LL A RIH +
Sbjct: 365 D-----PAIDHYACMVDLLGRVGELEDAKRTMERMP---MEPHAGVYGSLLNASRIHKQV 416
Query: 524 KVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQI 583
++GE+A ++ ELEP+NSG +++L+ +Y S GR +D +RI MK+ GVKK G SW++
Sbjct: 417 ELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEY 476
Query: 584 NDGGHVFLSGDSSHPKFHRLRYLL 607
H F+ D SH + + LL
Sbjct: 477 GGKLHKFIVADRSHERSDDIYQLL 500
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 172/393 (43%), Gaps = 63/393 (16%)
Query: 10 QNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQ 69
+N M R WN M+ GY+K A LF+ MPER++ T+ ++ G + +++
Sbjct: 63 RNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLE 122
Query: 70 GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM--PLKDVVSWNLVIGALVNC 127
A+ FD M R VV+WN+M+SGY NGL +EALR+F M ++ V+WN +I A +
Sbjct: 123 AARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRV 182
Query: 128 QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM-PAKDVQAWNLMIAGY 186
+D A F M R+V +W M+ G + G+ A +LF +M AK + + +
Sbjct: 183 GDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSV 242
Query: 187 LDN-GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
+ G +G E L +W + + +I +IS N++I
Sbjct: 243 ISACGHLGALE----------LGNW---VVRFLTENQIKLSISGH-----------NAMI 278
Query: 246 SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV 305
+ R G +++A ++ ++ S+ +I G+ G ++ LM+T
Sbjct: 279 FMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGH---GVEAINLMST-------- 327
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
MKE G PD TF VLT CS L+ GR++ A
Sbjct: 328 --------------------MKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPA 367
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+ + M+ + R G ++ A +P+
Sbjct: 368 IDHYA----CMVDLLGRVGELEDAKRTMERMPM 396
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 166/340 (48%), Gaps = 55/340 (16%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDN 67
+AQ LFD MP+R+ +TW M+ GY K L+ A F+ MPER + ++N +++G Q+
Sbjct: 92 QAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGL 151
Query: 68 VQGAKEVFDGM--EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
+ A +FD M R+ VTWN+MIS Y+ G +D A ++F+ MP ++VV+WN +I
Sbjct: 152 AEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYA 211
Query: 126 NCQRMDLAESYFKEM-----------------------GARDVASWTI------------ 150
+ +A FKEM GA ++ +W +
Sbjct: 212 QNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSI 271
Query: 151 -----MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH-- 203
M+ R G + +A+++F +M +DV ++N +I+G+ +G A +L M
Sbjct: 272 SGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEG 331
Query: 204 --DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
+ D ++ ++ ++ ++ F+ + + + ++ +L R G +++A +
Sbjct: 332 GIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYACMVDLLGRVGELEDAKRTM 391
Query: 262 EKYP-------YSNIASWTNVIVGYFEMGEVGSAIKVFEL 294
E+ P Y ++ + + I E+GE+ +A K+FEL
Sbjct: 392 ERMPMEPHAGVYGSLLN-ASRIHKQVELGEL-AANKLFEL 429
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 44/216 (20%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFT------ 54
MR + A+ LF+ MP R+ VTWN MI GY +NG A+ LF +M T
Sbjct: 180 MRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTM 239
Query: 55 ----------------------------------YNTVIAGLMQSDNVQGAKEVFDGMEV 80
+N +I + +++ AK VF M
Sbjct: 240 VSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMAT 299
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQRMDLAE---SY 136
RDVV++N++ISG+ +G EA+ + M + + IG L C L E
Sbjct: 300 RDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKV 359
Query: 137 FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
F+ + + + MV+ L R G + +A++ ++MP
Sbjct: 360 FESIKDPAIDHYACMVDLLGRVGELEDAKRTMERMP 395
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 119/303 (39%), Gaps = 69/303 (22%)
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
+ QM+ G PD + ++ T +G HA +K+ V NA+I MYA
Sbjct: 17 MYEQMQGCGVRPDAFVYPILI---KSAGTGGIG--FHAHVLKLGHGSDAFVRNAVIDMYA 71
Query: 382 R---------------------------------------------CGNIQSALLEFSSV 396
R ++++A F +
Sbjct: 72 RKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCM 131
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
P ++SWN+++ G A +G AE+AL LF+ M L ++ + +T+ ++SA G +D R
Sbjct: 132 PERSVVSWNAMLSGYAQNGLAEEALRLFDEM-LGAYR-NSVTWNAMISAYMRVGDLDSAR 189
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE-IRADGIEVSPTVWGALLG 515
F+ M + + + ++ + G A+ L E I A + +++
Sbjct: 190 KLFNTMPGRNVVT-----WNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVIS 244
Query: 516 ACRIHNNIKVGE------IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
AC +++G + + + +N+ ++ MY CG EDAKR+F +M
Sbjct: 245 ACGHLGALELGNWVVRFLTENQIKLSISGHNAMIF-----MYSRCGSMEDAKRVFQEMAT 299
Query: 570 NGV 572
V
Sbjct: 300 RDV 302
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 191/607 (31%), Positives = 319/607 (52%), Gaps = 39/607 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ ++ AQ + + + VT ++ + G L A LF+Q+P+ + F YN +I
Sbjct: 52 MKRLKLVHAQIILHGLAAQ-VVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIR 110
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G S++ + +F R +V+ M + + L+ P W V
Sbjct: 111 GYSNSNDPMKSLLLF-----RQMVSAGPMPNQFT----FPFVLKACAAKPFY----WEAV 157
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I V+ Q + L MG I+ V I+ AR++FD + + + +WN
Sbjct: 158 I---VHAQAIKLG------MGPHACVQNAIL-TAYVACRLILSARQVFDDISDRTIVSWN 207
Query: 181 LMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQM--- 233
MIAGY G A LFQ+M + D+ + L++ +S+ + + F +
Sbjct: 208 SMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSA--SSKHCNLDLGRFVHLYIV 265
Query: 234 ---PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
E N++I + + G ++ A ++ ++ SWT+++ Y G V +A++
Sbjct: 266 ITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQ 325
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+F M ++V WN +I L + E ++ F +M SG PD+AT S+L+ CS+
Sbjct: 326 IFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGD 385
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
L LG+Q H T+ N++I MYA+CG +Q+A+ F +P +++SWN II
Sbjct: 386 LALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGA 445
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
LA HG+ E+A+E+F+ M+ + PD+ITF G+LSACS++GLVD GRYYFD M + + + P
Sbjct: 446 LALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISP 505
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
HY C+VDLLGR G + EAM L+ ++ ++ VWGALLGACRI+ N+++ +
Sbjct: 506 GVEHYACMVDLLGRGGFLGEAMTLIQKMP---VKPDVVVWGALLGACRIYGNLEIAKQIM 562
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVF 590
++++EL NSG+Y++L+ MY R +D K+I M ++G+KK S+I+I+ + F
Sbjct: 563 KQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFIEIDGCCYQF 622
Query: 591 LSGDSSH 597
+ D H
Sbjct: 623 MVDDKRH 629
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 303/578 (52%), Gaps = 47/578 (8%)
Query: 37 LDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMI--SGYV 94
L+ A +F+++P+ + FT+NT+I G V D+V+ S + Y
Sbjct: 81 LEYARKVFDEIPQPNSFTWNTLIRAY-----ASGPDPVCSIWAFLDMVSSESQCYPNKYT 135
Query: 95 CNGLIDEALRV--------FHGMPLK-----DVVSWNLVIGALVNCQRMDLAESYFKEMG 141
LI A V HGM +K DV N +I +C +D A F +
Sbjct: 136 FPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 195
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+DV SW M+NG V++G +A +LF KM ++DV+A ++ + G L + C +
Sbjct: 196 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL-SACAKI------- 247
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
RDL + + + + R++ ++ N+++ + + G +++A
Sbjct: 248 ---RDL-EFGRRVCSYIEENRVNVNLTLA-----------NAMLDMYTKCGSIEDAKRLF 292
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
+ + +WT ++ GY + +A +V M +D+ WN +I +N E L
Sbjct: 293 DAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALL 352
Query: 322 FFVQMK-ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F +++ + + T S L+ C+ + L+LGR IH+ K V++A+I MY
Sbjct: 353 VFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMY 412
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
++CG+++ A F+SV D+ W+++I GLA HG +A+++F +M+ + KP+ +TF
Sbjct: 413 SKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFT 472
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
V ACS+ GLVD+ F M++ Y + P HY C+VD+LGR G +++A+ I A
Sbjct: 473 NVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKF---IEA 529
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
I S +VWGALLGAC+IH N+ + E+A R++ELEP N G +++L+ +Y G+ ++
Sbjct: 530 MPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNV 589
Query: 561 KRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+ M+ G+KKEPGCS I+I+ H FLSGD++HP
Sbjct: 590 SELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHP 627
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 219/495 (44%), Gaps = 70/495 (14%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN--------GFLD----NAMCLFNQMP--- 48
A ++ A+ +FD++PQ ++ TWN +IR Y FLD + C N+
Sbjct: 79 ASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPF 138
Query: 49 --------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
D+F N++I ++ A +VF ++ +D
Sbjct: 139 LIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 198
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQRMDLAE------S 135
VV+WNSMI+G+V G D+AL +F M +DV + ++ ++G L C ++ E S
Sbjct: 199 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCS 258
Query: 136 YFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
Y +E ++ M++ + G I +A++LFD M KD W M+ GY +
Sbjct: 259 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 318
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLI 249
A ++ M +D+ +W LI+ + + + A+ F ++ + + T S +S
Sbjct: 319 AREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACA 378
Query: 250 RNG---LVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV 305
+ G L + HSY++K N + +I Y + G++ A +VF + RDV VW+
Sbjct: 379 QVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSA 438
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI-----HAQ 360
MI GL + G E + F +M+E+ P+ TFT+V CS +D + +
Sbjct: 439 MIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSY 498
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEK 419
I + + + + R G ++ A+ ++PI S W +++ H A
Sbjct: 499 GIVPEDKHYACI----VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH--ANL 552
Query: 420 ALELFERMRLTDFKP 434
+L RL + +P
Sbjct: 553 SLAEMACTRLLELEP 567
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 203/635 (31%), Positives = 323/635 (50%), Gaps = 45/635 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP---ERDMFTYNTV 58
+ I A+N+F KM R+ V+ N +I G + + A+ LF +M E + +Y +
Sbjct: 331 KAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMII 390
Query: 59 IAGLMQSDNVQGAKE---------VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
+ + ++ K + G+ + N +I+ Y G I++A VF M
Sbjct: 391 LTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLM 450
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV-ASWTIMVNGL----------VRE 158
KD V+WN +I L ++ A F+EM ++ S M++ L V E
Sbjct: 451 DNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGE 510
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
E KL + DV N ++A Y + G V + F M D D SW LI L
Sbjct: 511 QLHCEGLKLGLDL---DVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALA 567
Query: 219 NSR--RIDAAISYFKQMPETCEKTWNSIISVLIR------NGLVKEAHSYLEKYPYSNIA 270
+S ++A S+ M + + I++L + L K+ H+ + K +
Sbjct: 568 DSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADT 627
Query: 271 SWTNVIVG-YFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ N ++ Y + G++G +F M+ R D WN MI G N+L + + M +
Sbjct: 628 AIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQ 687
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
G D TF +VL+ C+ + TL+ G ++H +++ + +A++ MYA+CG I
Sbjct: 688 KGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDY 747
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F +P ++ SWNS+I G A HG+ K+L+LF +M+L PD +TFVGVLSACS+
Sbjct: 748 ASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSH 807
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
AGLV++G +FD M Y L PR H++C+VDLLGR G +++ + LN+ + V P
Sbjct: 808 AGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQ-----MPVKPN 862
Query: 509 V--WGALLGACRIHN--NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
V W +LGAC N N +G A E ++E+EP N+ Y++L+ MY S G+ +D +
Sbjct: 863 VLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTR 922
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
M++ VKKE GCSW+ + DG HVF++GD SHP+
Sbjct: 923 VAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPE 957
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 165/641 (25%), Positives = 288/641 (44%), Gaps = 80/641 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R + + +FD+MP R+ V+W+ +I GY +N + A LF +M +
Sbjct: 120 RVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGS 179
Query: 62 LMQSDNVQGAKEVFDGME----------VRDVVTWNSMISGYV-CNGLIDEALRVFHGMP 110
++++ G + GM+ V DV N +IS Y G++D A R F +
Sbjct: 180 VIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIW 239
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESY--FKEM----------------GARDVASWTIMV 152
+++VS N +I V CQR D ++ F M G+ A+ ++
Sbjct: 240 PRNLVSLNSMIS--VYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLAN 297
Query: 153 NGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
+GLV +++ ++ D+ + +++G+ G +G A+++FQKM R++ S
Sbjct: 298 SGLVLLEQLLT--RVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNG 355
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL--------IRNGLVK--EAHSYLE 262
LI GLV +R + A+ F +M ++ E NS + +L + NG K E H++L
Sbjct: 356 LIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLI 415
Query: 263 KYPYSN--IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+ N IA +I Y + G + A VF LM +D WN MI GL +N E +
Sbjct: 416 RSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAV 475
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
K F +M+ + P N T S L+ C+ L + +G Q+H + +K+ + +VSNA++ +Y
Sbjct: 476 KTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALY 535
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLA-YHGYAEKALELFERMRLTDFKPDDITF 439
CG ++ FS + +D +SWNS+I LA +A+E F M + P+ +TF
Sbjct: 536 GECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTF 595
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG------------- 486
+ +L+A S L + G+ + K + +A ++ G+ G
Sbjct: 596 ITILAAVSSLSLHELGK-QIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMS 654
Query: 487 -------------------LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG- 526
L+ +AM+++ + G + + +L AC ++ G
Sbjct: 655 DRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGM 714
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
E+ G V ++ + L +MY CGR + A R F M
Sbjct: 715 EVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMM 755
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 142/323 (43%), Gaps = 23/323 (7%)
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+E H L K + N N ++ Y +G++GS KVF+ M R++ W+ +I G
Sbjct: 92 AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTR 151
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT--LDLGRQIHAQAIKIARNQFT 370
N + E + F +M G P++ F SV+ C + L G QIH K
Sbjct: 152 NRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDV 211
Query: 371 TVSNAMITMYARC-GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
T SN +I+MY G + A F S+ +++S NS+I G A A ++F M+
Sbjct: 212 TASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQK 271
Query: 430 T----DFKPDDITFVGVLSA-CSYA--GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
KP++ TF ++SA CS A GLV + K+ + + +V
Sbjct: 272 EVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVG--SALVSGF 329
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN--- 539
+ G I A N+ ++ + ++ G ++G R K GE A E ME++ +
Sbjct: 330 AKAGSIGYAKNIFQKMSYRNV---VSLNGLIIGLVR----QKRGEEAVELFMEMKDSVEL 382
Query: 540 NSGVYLILTEMYLSCGRREDAKR 562
N Y+I+ + E+ KR
Sbjct: 383 NPNSYMIILTAFPEFHVLENGKR 405
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 119/280 (42%), Gaps = 17/280 (6%)
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
+LF D+ N +I Y G +G +F +M R+L SW LI+G +R +
Sbjct: 98 QLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNE 157
Query: 226 AISYFKQMPE----TCEKTWNSIISVLIRNG-----LVKEAHSYLEKYPYSNIASWTNVI 276
A F++M + S+I G + H + K Y N + +NV+
Sbjct: 158 ACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVL 217
Query: 277 VGYF--EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES----G 330
+ + +G V A + F+ + R++ N MI + F M++ G
Sbjct: 218 ISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDG 277
Query: 331 PSPDNATFTSVLTICSDLPT--LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
P+ TF S+++ L L L Q+ + K V +A+++ +A+ G+I
Sbjct: 278 LKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGY 337
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
A F + +++S N +I GL E+A+ELF M+
Sbjct: 338 AKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMK 377
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 201/674 (29%), Positives = 339/674 (50%), Gaps = 100/674 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER----- 50
+N I+ A+ +FD++ ++ VTW +I GY K G ++ LF QM P+R
Sbjct: 84 KNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSS 143
Query: 51 ----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
D+ N +I + + V+ +++FD M V++
Sbjct: 144 VLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKN 203
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN----LVIGALVNCQRMDLAESYFK 138
+++W +MISGY+ N EA+++F M + + W L +C ++ E
Sbjct: 204 IISWTTMISGYMQNSFDWEAMKLFGEM---NRLGWKPDGFACTSVLTSCGSLEALEQ--- 257
Query: 139 EMGARDVASWTIMV---------NGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAG 185
R V ++TI NGL+ + + +A+K+FD M ++V ++N MI G
Sbjct: 258 ---GRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEG 314
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
Y + A +LF +M R P + T+ S++
Sbjct: 315 YSSQEKLSEALELFHEMRVR--------------------------LFPPSL-LTFVSLL 347
Query: 246 SV---LIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
V L L K+ H + K S ++ + + +I Y + V A VFE M +D+
Sbjct: 348 GVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIV 407
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
VWN M FG ++ EE LK + ++ S P+ TF +++T S+L +L G+Q H Q
Sbjct: 408 VWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQL 467
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
+K+ + V+NA++ MYA+CG+I+ A F+S D++ WNS+I A HG AE+AL
Sbjct: 468 VKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEAL 527
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
+F M +P+ +TFV VLSACS+AG V+ G +F+ M + ++P + HY CVV L
Sbjct: 528 GMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPG-FGIKPGTEHYACVVSL 586
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LGR G + EA + ++ IE + VW +LL ACRI N+++G+ A E + +P +S
Sbjct: 587 LGRSGKLFEAKEFIEKMP---IEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDS 643
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFH 601
G Y++L+ ++ S G D K++ +M + V KEPG SWI++N+ +VF++ ++H +
Sbjct: 644 GSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREAD 703
Query: 602 RLRYLLNLLHTEIE 615
+ +L++L I+
Sbjct: 704 MIGSVLDILIQHIK 717
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 131/542 (24%), Positives = 248/542 (45%), Gaps = 47/542 (8%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
++D++ ++I ++ B++ A+ VFD + + VTW ++I+GY G +L +F
Sbjct: 69 DQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQ 128
Query: 109 MPLKDVVSWNLVIGALVN-CQRMDLAE------SYFKEMGAR-DVASWTIMVNGLVREGR 160
M +VV V+ ++++ C ++ E +Y G DV+ ++++ + R
Sbjct: 129 MRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNR 188
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ RKLFD+M K++ +W MI+GY+ N A LF +M + WK +G +
Sbjct: 189 VKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEM---NRLGWKP--DGFACT 243
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
+ + S + + + + +I + L N VK + ++ Y SN+
Sbjct: 244 SVLTSCGS-LEALEQGRQVHAYTIKANLESNEFVK--NGLIDMYAKSNL----------- 289
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ A KVF++M ++V +N MI G + E L+ F +M+ P TF S
Sbjct: 290 ----LXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVS 345
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
+L + + L L+L +QIH IK + +A+I +Y++C ++ A F + D
Sbjct: 346 LLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKD 405
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
I+ WN++ G H E+AL+L+ ++ + KP++ TF +++A S + G+ + +
Sbjct: 406 IVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHN 465
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
+ K L +VD+ + G I+EA + N I W +++ H
Sbjct: 466 QLV-KMGLDFCPFVTNALVDMYAKCGSIEEARKMFN----SSIWRDVVCWNSMISTHAQH 520
Query: 521 NNIKVGEIAGERVME--LEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKENGVKKE 575
+ +M+ ++PN Y+ + +C G ED F M G+K
Sbjct: 521 GEAEEALGMFREMMKEGIQPN----YVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIK-- 574
Query: 576 PG 577
PG
Sbjct: 575 PG 576
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 128/519 (24%), Positives = 222/519 (42%), Gaps = 85/519 (16%)
Query: 97 GLIDEALRVFHGMPLKDVVSWN-LVIGALVN-CQRMDLAESYFKEMG-------ARDVAS 147
G +EAL VF + K N V+ +++ C ++ + E + G +DV
Sbjct: 15 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74
Query: 148 WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL 207
T +++ + G I AR +FD++ K W +IAGY G V+ +LF +M + +
Sbjct: 75 GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETN- 133
Query: 208 TSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS 267
+V R + +++ M E E K+ H+Y+ +
Sbjct: 134 ---------VVPDRYVVSSVLSACSMLEFLEGG--------------KQIHAYVLRRGTE 170
Query: 268 NIASWTNVIVGYF-EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
S NV++ ++ + V + K+F+ M +++ W MI G +N E +K F +M
Sbjct: 171 MDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEM 230
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMITMYARCG 384
G PD TSVLT C L L+ GRQ+HA IK + N+F V N +I MYA+
Sbjct: 231 NRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEF--VKNGLIDMYAKSN 288
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL- 443
+ A F + ++IS+N++I G + +ALELF MR+ F P +TFV +L
Sbjct: 289 LLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLG 348
Query: 444 -------------------------------------SACSYAGLVDQGRYYFDCMKNKY 466
S CSY V R+ F+ M K
Sbjct: 349 VSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSY---VKDARHVFEEMNEKD 405
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
+ + + L +EA+ L + ++ + + + AL+ A +++ G
Sbjct: 406 IVVWNAMFFGYTQHLEN-----EEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHG 460
Query: 527 EIAGERVMELEPNNSG-VYLILTEMYLSCGRREDAKRIF 564
+ +++++ + V L +MY CG E+A+++F
Sbjct: 461 QQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMF 499
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 182/558 (32%), Positives = 286/558 (51%), Gaps = 30/558 (5%)
Query: 77 GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESY 136
G+ +V S++ Y+ G + EA RVF MP +DV +WN ++ L R A +
Sbjct: 96 GLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTL 155
Query: 137 FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ--------AWNLMIAGYLD 188
M VA + ++ ++ ++ R L M V+ N +I Y
Sbjct: 156 LGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGK 215
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET--CEK--TWNSI 244
G + A +F M RDL +W +I+ ++ AA+ F M E+ C T S+
Sbjct: 216 LGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSL 275
Query: 245 ISVLIRNG---LVKEAHSYLEK--YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
S + + G K H Y+ + + +I + ++ Y +M ++ +A KVF+ + RD
Sbjct: 276 ASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRD 335
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMK-ESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
V WN +I G +N L E ++ + M G P TF SVL S L L G ++H
Sbjct: 336 VVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMH 395
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
A +IK N V+ +I +YA+CG + A+ F +P WN+II GL HG+
Sbjct: 396 ALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGA 455
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
KAL LF +M+ + KPD +TFV +L+ACS+AGLVDQGR +FD M+ Y + P + HYTC+
Sbjct: 456 KALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCM 515
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
VD+LGR G +DEA + + I+ VWGALLGACRIH N+++G++A + + EL+P
Sbjct: 516 VDMLGRAGQLDEAFEFIQSMP---IKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDP 572
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
N G Y++++ MY G+ + + + ++ ++K PG S +++ VF SG + P
Sbjct: 573 ENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEP 632
Query: 599 KFHRLRYLLNLLHTEIER 616
H EI+R
Sbjct: 633 HPQ---------HEEIQR 641
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 216/499 (43%), Gaps = 84/499 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN----------------GFLDNAMCLF 44
+R R+ EA +FD+MP+RD WN M+ G +N G +A+ L
Sbjct: 113 LRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLS 172
Query: 45 NQMP-----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
+ +P ++F N +I + + A VF GM +R
Sbjct: 173 SVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALR 232
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAES-- 135
D+VTWNS+IS G + A+ +FHGM DV++ + A+ C A+S
Sbjct: 233 DLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVH 292
Query: 136 -YFKEMG--ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
Y + G D+ + MV+ + +I A+K+FD +P +DV +WN +I GY+ NG
Sbjct: 293 CYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLA 352
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A ++ MH+ + K + V+ + A SY + + + ++ I+ G
Sbjct: 353 NEAIRIYNDMHNHE--GLKPIQGTFVS---VLPAYSYLGGLQQGMR-----MHALSIKTG 402
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
L L+ Y T +I Y + G++ A+ +FE M R WN +I GLG
Sbjct: 403 L------NLDVY------VTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGV 450
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR------QIHAQAIKIAR 366
+ G + L F QM++ PD+ TF S+L CS +D GR Q + IA+
Sbjct: 451 HGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAK 510
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFE 425
+ M+ M R G + A S+PI D W +++ HG E +
Sbjct: 511 HY-----TCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVE--MGKVA 563
Query: 426 RMRLTDFKPDDITFVGVLS 444
L + P+++ + ++S
Sbjct: 564 SQNLFELDPENVGYYVLMS 582
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 185/606 (30%), Positives = 297/606 (49%), Gaps = 50/606 (8%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N++++ Y + L +A L + MP+ + +YNT+++G + V A ++FDG RD
Sbjct: 54 NILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCH 113
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM---- 140
+WN ++SG V N + E L F M V N ++ C + + ++
Sbjct: 114 SWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCCDLGFGQQVHADIVKVC 173
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG----CVGVAE 196
D T ++ G I +ARK+FD MP++ + WN MI+ Y G +G+
Sbjct: 174 SDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFR 233
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET--CEK--TWNSIISVLIRNG 252
L ++ D ++ ++N ++ A+ + E C T N+++++ + G
Sbjct: 234 QLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCG 293
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
V A E+ P ++ SWT +IVG+ + G +
Sbjct: 294 YVASASRLFEEIPDQDVVSWTVIIVGFLQSGHM--------------------------- 326
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA-RNQFTT 371
EE + F QM+ P++ TF +L C+D GR H +K
Sbjct: 327 ----EEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVV 382
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL-- 429
V +A++ MY++CG + AL F +P DI SWN IICG A +G KAL+L+ M L
Sbjct: 383 VGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLG 442
Query: 430 -TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
+ P+++TFVGVL ACS+ GL+ +G YF M +K+ ++P + HYTC+VDLLGR GL+
Sbjct: 443 PSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLL 502
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
EA L I A I+ +WGALLGAC++H ++++ E + EP NS Y++L
Sbjct: 503 QEAEAL---ILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLA 559
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
Y G +A I M+ GV+K GCSW++I H FL+GD HP+ +L
Sbjct: 560 NSYTDIGEWGEAVEIREVMEARGVEKTAGCSWVEIGTCMHSFLAGDXLHPQIEVASQVLP 619
Query: 609 LLHTEI 614
L+ ++
Sbjct: 620 RLYLQM 625
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 141/626 (22%), Positives = 251/626 (40%), Gaps = 111/626 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ +A L MPQ V++N ++ GYFK G + A+ LF+ +RD ++N V++G +++
Sbjct: 66 LSDAHKLLHFMPQPSVVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKN 125
Query: 66 DNVQGAKEVFDGMEVR-----------------------------------DVVTWNSMI 90
+ F M D +++
Sbjct: 126 HKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCCDLGFGQQVHADIVKVCSDLDAFIGTNLL 185
Query: 91 SGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG----ARDVA 146
Y G I +A +VF GMP + +V+WN +I R D + F+++ + D
Sbjct: 186 RMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEY 245
Query: 147 SWTIMVNGLVREGRIVEARK----LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
++ I++N ++ EA + + ++ D N ++ Y G V A LF+++
Sbjct: 246 TYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEI 305
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIRNGLVKEA- 257
D+D+ SW +I G + S ++ A+ F QM E T+ ++ ++
Sbjct: 306 PDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGR 365
Query: 258 --HSYLEKYPY--SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
H + K+ +++ + V+ Y + GE+G A++ F+ M RD+ WN +I G +N
Sbjct: 366 HFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQN 425
Query: 314 DLGEEGLKFFVQMKESGPS---PDNATFTSVLTICSDLPTLDLG-----RQIHAQAIKIA 365
G + LK + +M GPS P+ TF VL CS L G + IK
Sbjct: 426 GAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPT 485
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
+T M+ + R G +Q A ++PI
Sbjct: 486 AEHYT----CMVDLLGRAGLLQEAEALILALPI--------------------------- 514
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR-SAHYTCVVDLLGR 484
KPD++ + +L AC G V R ++ Y +PR S++Y + +
Sbjct: 515 -------KPDNVMWGALLGACKLHGDVQMTR---RTAEHLYTNEPRNSSNYVLLANSYTD 564
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G EA+ + + A G+E + +G C +H+ +AG+ L P
Sbjct: 565 IGEWGEAVEIREVMEARGVEKTAGCSWVEIGTC-MHSF-----LAGD---XLHPQIEVAS 615
Query: 545 LILTEMYLSCGRREDAKRIFAQMKEN 570
+L +YL R R ++ N
Sbjct: 616 QVLPRLYLQMRERSCTHRKKTLLRAN 641
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 289/560 (51%), Gaps = 37/560 (6%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS--WNLVIGALV 125
V A+ VFDGM R+ +W++M++GY +EA +F M L++ S V A++
Sbjct: 169 VSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM-LEECPSEKSEFVATAVL 227
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
+ + L ++M +GL+ + +++ V N ++
Sbjct: 228 SAVSVPLGLLMGEQM------------HGLIVKDGLLDF-----------VSVENSLVTM 264
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET----CEKTW 241
Y GC+G A +F+ +R+ +W +I G + D+A+S F QM E T+
Sbjct: 265 YAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTF 324
Query: 242 NSIISVLIRNGLV---KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
+++ G + K+AH + K + I + ++ Y + G + A + F+ +
Sbjct: 325 VGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYE 384
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
D+ +W M+ G +N EE L + +M + G P +T S L C+ + L+ G+Q+
Sbjct: 385 VDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQL 444
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H Q +K V +A+ TMY++CGN++ + F +P D+I+WNSII G + +G
Sbjct: 445 HTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCG 504
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
AL+LFE M++ PD+ITF+ +L ACS+ GLVD+G YF M Y L PR HY C
Sbjct: 505 NGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYAC 564
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
+VD+L R G++ EA + + I I+ +W +LGACR + VG AGER+MEL
Sbjct: 565 MVDILSRAGMLKEAKDFIESIT---IDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELG 621
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
+S Y++L+ +Y S + D +R+ M+ GV K+PGCSW+++N HVF+ G+ H
Sbjct: 622 TGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQH 681
Query: 598 PKFHRLRYLLNLLHTEIERE 617
P+ + L L ++ E
Sbjct: 682 PEAENINAQLRRLAKHMKDE 701
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 179/415 (43%), Gaps = 53/415 (12%)
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQM--PETCEKTWNSI------ISVLIRNGLVKE 256
RD+TSW L+N L R +D A+S F+ M T + +S +
Sbjct: 80 RDVTSWNSLLNPLSGHRPLD-ALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTA 138
Query: 257 AHSYLEKYP--YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
AH+ K P SN+ T+++ Y ++G V A +VF+ M R+ W+ M+ G
Sbjct: 139 AHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEK 198
Query: 315 LGEEGLKFFVQMKESGPSPDNA-TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
EE F M E PS + T+VL+ S L +G Q+H +K F +V
Sbjct: 199 CSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVE 258
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
N+++TMYA+ G + +A F S + I+W+++I G A +G A+ A+ +F +M F
Sbjct: 259 NSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFT 318
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
P + TFVGVL+A S G + G+ M K + + + +VD+ + G I +A
Sbjct: 319 PTEFTFVGVLNASSDLGALAVGKQAHGLMV-KLGFEVQIYVKSALVDMYAKCGCIADAKE 377
Query: 494 LLNEIRADGIEVSPTVWGALL----------------------GACRIHNNIKVGEIAGE 531
+++ EV +W A++ G + I G A
Sbjct: 378 GFDQL----YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACA 433
Query: 532 RVMELEPNN--------------SGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ LEP + V L+ MY CG ED +F ++ + V
Sbjct: 434 GIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDV 488
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 170/377 (45%), Gaps = 31/377 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVIA 60
+ +A+ +FD MPQR++ +W+ M+ GY + A LF M E+ F V++
Sbjct: 169 VSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLS 228
Query: 61 ------GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
GL+ + + G V DG+ + V NS+++ Y G + A VF ++
Sbjct: 229 AVSVPLGLLMGEQMHGLI-VKDGL-LDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNS 286
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIV-------EARKL 167
++W+ +I D A S F +M A G++ + +A L
Sbjct: 287 ITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGL 346
Query: 168 FDKMPAKDVQAW--NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
K+ +VQ + + ++ Y GC+ A++ F ++++ D+ W +++G V + +
Sbjct: 347 MVKL-GFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEE 405
Query: 226 AISYFKQMPETCEKTWNSIISVLIR--NGLV-----KEAHSYLEKYPYSNIASWTNVI-V 277
A++ + +M + S I+ +R G+ K+ H+ + KY A + +
Sbjct: 406 ALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALST 465
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + G + + VF + RDV WN +I G +N G L F +MK G PDN T
Sbjct: 466 MYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNIT 525
Query: 338 FTSVLTICSDLPTLDLG 354
F ++L CS + +D G
Sbjct: 526 FINILCACSHMGLVDRG 542
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 50/215 (23%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I +A+ FD++ + D V W M+ G+ +NG + A+ L+ +M + + + IA +++
Sbjct: 372 IADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRA 431
Query: 66 ---------------------------------------DNVQGAKEVFDGMEVRDVVTW 86
N++ VF + RDV+ W
Sbjct: 432 CAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAW 491
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQRMDLAE---SYFKEMGA 142
NS+ISG+ NG + AL +F M ++ + N+ I L C M L + YF M
Sbjct: 492 NSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLM-T 550
Query: 143 RDVA------SWTIMVNGLVREGRIVEARKLFDKM 171
+D + MV+ L R G + EA+ + +
Sbjct: 551 KDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESI 585
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 27/168 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+++ ++F ++P RD + WN +I G+ +NG + A+ LF +M D T+ ++
Sbjct: 473 LEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCA 532
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEA------LRVFHG 108
V E F M +T + Y C G++ EA + + HG
Sbjct: 533 CSHMGLVDRGWEYFSLMTKDYGLT--PRLDHYACMVDILSRAGMLKEAKDFIESITIDHG 590
Query: 109 MPLKDVVSWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVN 153
L W +V+GA + + D+ A E+G D +++ ++ N
Sbjct: 591 TCL-----WRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSN 633
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 289/560 (51%), Gaps = 37/560 (6%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN--LVIGALV 125
V A+ VFDGM R+ +W++M++GY +EA +F M L++ S V A++
Sbjct: 63 VSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM-LEECPSEKSEFVATAVL 121
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
+ + L ++M +GL+ + +++ V N ++
Sbjct: 122 SAVSVPLGLLMGEQM------------HGLIVKDGLLDF-----------VSVENSLVTM 158
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET----CEKTW 241
Y GC+G A +F+ +R+ +W +I G + D+A+S F QM E T+
Sbjct: 159 YAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTF 218
Query: 242 NSIISVLIRNGLV---KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
+++ G + K+AH + K + I + ++ Y + G + A + F+ +
Sbjct: 219 VGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYE 278
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
D+ +W M+ G +N EE L + +M + G P +T S L C+ + L+ G+Q+
Sbjct: 279 VDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQL 338
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H Q +K V +A+ TMY++CGN++ + F +P D+I+WNSII G + +G
Sbjct: 339 HTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCG 398
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
AL+LFE M++ PD+ITF+ +L ACS+ GLVD+G YF M Y L PR HY C
Sbjct: 399 NGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYAC 458
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
+VD+L R G++ EA + + I I+ +W +LGACR + VG AGER+MEL
Sbjct: 459 MVDILSRAGMLKEAKDFIESIT---IDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELG 515
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
+S Y++L+ +Y S + D +R+ M+ GV K+PGCSW+++N HVF+ G+ H
Sbjct: 516 TGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQH 575
Query: 598 PKFHRLRYLLNLLHTEIERE 617
P+ + L L ++ E
Sbjct: 576 PEAENINAQLRRLAKHMKDE 595
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 170/377 (45%), Gaps = 31/377 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVIA 60
+ +A+ +FD MPQR++ +W+ M+ GY + A LF M E+ F V++
Sbjct: 63 VSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLS 122
Query: 61 ------GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
GL+ + + G V DG+ + V NS+++ Y G + A VF ++
Sbjct: 123 AVSVPLGLLMGEQMHGLI-VKDGL-LDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNS 180
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIV-------EARKL 167
++W+ +I D A S F +M A G++ + +A L
Sbjct: 181 ITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGL 240
Query: 168 FDKMPAKDVQAW--NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
K+ +VQ + + ++ Y GC+ A++ F ++++ D+ W +++G V + +
Sbjct: 241 MVKL-GFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEE 299
Query: 226 AISYFKQMPETCEKTWNSIISVLIR--NGLV-----KEAHSYLEKYPYSNIASWTNVI-V 277
A++ + +M + S I+ +R G+ K+ H+ + KY A + +
Sbjct: 300 ALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALST 359
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + G + + VF + RDV WN +I G +N G L F +MK G PDN T
Sbjct: 360 MYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNIT 419
Query: 338 FTSVLTICSDLPTLDLG 354
F ++L CS + +D G
Sbjct: 420 FINILCACSHMGLVDRG 436
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 50/215 (23%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I +A+ FD++ + D V W M+ G+ +NG + A+ L+ +M + + + IA +++
Sbjct: 266 IADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRA 325
Query: 66 ---------------------------------------DNVQGAKEVFDGMEVRDVVTW 86
N++ VF + RDV+ W
Sbjct: 326 CAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAW 385
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQRMDLAE---SYFKEMGA 142
NS+ISG+ NG + AL +F M ++ + N+ I L C M L + YF M
Sbjct: 386 NSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLM-T 444
Query: 143 RDVA------SWTIMVNGLVREGRIVEARKLFDKM 171
+D + MV+ L R G + EA+ + +
Sbjct: 445 KDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESI 479
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 27/168 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+++ ++F ++P RD + WN +I G+ +NG + A+ LF +M D T+ ++
Sbjct: 367 LEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCA 426
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEA------LRVFHG 108
V E F M +T + Y C G++ EA + + HG
Sbjct: 427 CSHMGLVDRGWEYFSLMTKDYGLT--PRLDHYACMVDILSRAGMLKEAKDFIESITIDHG 484
Query: 109 MPLKDVVSWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVN 153
L W +V+GA + + D+ A E+G D +++ ++ N
Sbjct: 485 TCL-----WRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSN 527
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 323/641 (50%), Gaps = 67/641 (10%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS----DNVQGAKEVF 75
D N +I Y K GF+D A+ +F+ MP R++ ++N++I+G ++ D E+
Sbjct: 65 DVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMM 124
Query: 76 DGME--VRDVVTWNSMISGYVCNGLIDEALRV-FHGMPLK-----DVVSWNLVIGALVNC 127
G E + D+ T +++ VC +D + + HG+ +K DV N ++ C
Sbjct: 125 AGEEGLLPDIATLVTVLP--VCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKC 182
Query: 128 QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM---------------- 171
+ A+ F + ++ SW M+ GL +G I EA LF +M
Sbjct: 183 GYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNI 242
Query: 172 -PA----------KDVQAWNL-------------MIAGYLDNGCVGVAEDLFQKMHDRDL 207
PA K++ +++ +A Y G + AE +F M + +
Sbjct: 243 LPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTV 302
Query: 208 TSWKQLINGLVNSRRIDAAISYFKQMPET-CEKTWNSIISVLIRNGLVK------EAHSY 260
SW LI G + A++ + QM + W +I S+L+ + +K E H +
Sbjct: 303 NSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGF 362
Query: 261 LEKYPYSNIASWTNV--IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
+ ++ I S+ + + Y GE SA +F+ M + WN MI G +N L E+
Sbjct: 363 VLRHGLE-IDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPED 421
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L F ++ G P + SVL CS L LG++ H A+K + V+ + I
Sbjct: 422 ALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTID 481
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MYA+ G I+ + F + D+ SWN+II HG E+++ELFERMR PD T
Sbjct: 482 MYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFT 541
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
F+G+L+ CS+AGLV++G YF+ M+N + ++P+ HY CV+D+LGR G +D+A+ L++E+
Sbjct: 542 FIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEM 601
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
+ VW +LL CR +++G+I E+++ELEP N Y+ L+ +Y GR +
Sbjct: 602 PE---QPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWD 658
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
D +R+ +K+ G++K+ GCSWI++ H F++GD+ P+
Sbjct: 659 DVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQ 699
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 141/514 (27%), Positives = 240/514 (46%), Gaps = 45/514 (8%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRV 105
D FT+ VI S + +G EV GM ++ DV N++I+ Y G +D A++V
Sbjct: 30 DNFTFPCVIKACTGSLD-RGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKV 88
Query: 106 FHGMPLKDVVSWNLVI------GALVNCQRMDLAESYFKEMG-ARDVASWTIMVNGLVRE 158
FH MP++++VSWN +I G +C M L E E G D+A+ ++ RE
Sbjct: 89 FHYMPVRNLVSWNSIISGFSENGFSKDCFDM-LVEMMAGEEGLLPDIATLVTVLPVCARE 147
Query: 159 GRI---VEARKLFDKMP-AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLI 214
+ + L K+ ++DV+ N ++ Y G + A+ LF K + ++ SW +I
Sbjct: 148 VDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMI 207
Query: 215 NGLVNSRRIDAAISYFK--QMPETCEKTWNSIISVL--------IRNGLVKEAHSY--LE 262
GL I A + F+ QM E E +++++L +R+ +KE H Y
Sbjct: 208 GGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRS--LKELHGYSIRH 265
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ Y + + + Y + G + A +VF M T+ V WN +I G +N + L
Sbjct: 266 GFQYDELVA-NGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNL 324
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
++QM SG PD T S+L + L +L G+++H ++ + + +++++Y
Sbjct: 325 YIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIH 384
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CG SA L F + +SWN++I G + +G E AL LF ++ F+P DI V V
Sbjct: 385 CGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSV 444
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
L ACS + G+ C K L +D+ + G I E+ ++ + ++
Sbjct: 445 LGACSQQSALRLGKET-HCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKD 503
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
+ W A++ A +H + GE +EL
Sbjct: 504 L----ASWNAIIAAYGVHGD-------GEESIEL 526
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 123/300 (41%), Gaps = 45/300 (15%)
Query: 313 NDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
N+L + + FV++ ++ + DN TF V+ C+ LG IH IK+
Sbjct: 8 NELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVF 67
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
V NA+I MY + G + +A+ F +P+ +++SWNSII G + +G+++ ++ M +
Sbjct: 68 VGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGE 127
Query: 432 --FKPDDITFVGVLSAC-----------------------------------SYAGLVDQ 454
PD T V VL C S G + +
Sbjct: 128 EGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTE 187
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR-ADGIEVSPTVWGAL 513
+ FD KN + + + ++ L G I EA NL E++ + IEV+ +
Sbjct: 188 AQMLFD--KNN---RKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNI 242
Query: 514 LGAC-RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
L AC I + E+ G + + V Y CG A+R+F M+ V
Sbjct: 243 LPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTV 302
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 186/632 (29%), Positives = 327/632 (51%), Gaps = 27/632 (4%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I ++ +F + + N M++GY + A+ ++ M E ++ N L QS
Sbjct: 76 INQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQS 135
Query: 66 DNVQGAKEVFDGMEVRD----------VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+++ A+ FDG ++D V N++I+ Y G + +A +VF G + D+V
Sbjct: 136 CSIRLAE--FDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMV 193
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
SWN ++ V ++ A+ + M R+V + M+ ++G + EA KLF++M KD
Sbjct: 194 SWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKD 253
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS-RRIDAAIS------ 228
+ +W+ +I+ Y N A LF++M+ + + ++ ++++ R+ I+
Sbjct: 254 LVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHG 313
Query: 229 -YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGS 287
K ET N++I + V A + + SW ++I GY + GE+
Sbjct: 314 LVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEK 373
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A +F+ M +D W+ MI G + D E L F +M+ G PD SV++ C+
Sbjct: 374 ARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTH 433
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
L LD G+ IHA K + +I MY + G ++ AL F + + +WN++
Sbjct: 434 LAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNAL 493
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
I GLA +G +K+L+ F M+ P++ITFV VL AC + GLVD+G +F+ M ++
Sbjct: 494 ILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHK 553
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV--WGALLGACRIHNNIKV 525
+ P HY C+VDLLGR G++ EA L+ + + ++P V WGALLGAC+ + + +
Sbjct: 554 IGPNIKHYGCMVDLLGRAGMLKEAEELI-----ESMPMAPDVSTWGALLGACKKYGDNET 608
Query: 526 GEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
GE G +++EL P++ G ++L+ +Y S G D + M+++GV K PGCS I+ +
Sbjct: 609 GERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHG 668
Query: 586 GGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
H FL+GD +HP+ + ++L+ + +++ E
Sbjct: 669 RVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLE 700
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 173/405 (42%), Gaps = 71/405 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ ++EA LF++M Q+D V+W+ +I Y +N + A+ LF +M + V+
Sbjct: 235 KKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLS 294
Query: 62 LMQS---------------------------------------DNVQGAKEVFDGMEVRD 82
++ + + V A+++F D
Sbjct: 295 VLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLD 354
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
++WNSMISGYV G I++A +F MP KD VSW+ +I R F+EM
Sbjct: 355 QISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQI 414
Query: 143 RDV-ASWTIMVN--------GLVREGRIVEA--RKLFDKMPAKDVQAWNLMIAGYLDNGC 191
TI+V+ + +G+ + A RK K+ ++ +I Y+ GC
Sbjct: 415 EGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKI---NIILGTTLINMYMKLGC 471
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE----TCEKTWNSIISV 247
V A ++F+ + ++ +++W LI GL + +D ++ F +M E E T+ +++
Sbjct: 472 VEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGA 531
Query: 248 LIRNGLVKEAHSYL-----EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT-TRDVT 301
GLV E H + E NI + ++ G + A ++ E M DV+
Sbjct: 532 CRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVS 591
Query: 302 VWNVMIFGL---GENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
W ++ G+N+ GE + V++ PD+ F +L+
Sbjct: 592 TWGALLGACKKYGDNETGERIGRKLVELH-----PDHDGFNVLLS 631
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYN 56
M+ +++A +F + ++ TWN +I G NG +D ++ F++M E + T+
Sbjct: 467 MKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFV 526
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGM 109
V+ V F+ M + N I Y C G++ EA + M
Sbjct: 527 AVLGACRHMGLVDEGHRHFNSMIQEHKIGPN--IKHYGCMVDLLGRAGMLKEAEELIESM 584
Query: 110 PL-KDVVSWNLVIGA 123
P+ DV +W ++GA
Sbjct: 585 PMAPDVSTWGALLGA 599
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 180/559 (32%), Positives = 297/559 (53%), Gaps = 23/559 (4%)
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
I L+ + +Q A++VFD + D S I+ Y L +EALR F M +V
Sbjct: 37 IRRLLNASFIQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVC 96
Query: 119 LVIGALVNCQRMDLAESYFKEMGA--------RDVASWTIMVNGLVREGRIVEARKLFDK 170
I + LA K++ + V ++N + + A +FD
Sbjct: 97 FTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDG 156
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
+ KD A+N +I+ Y +G V A +LF KM DR + SW +I+ + F
Sbjct: 157 ILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIF 216
Query: 231 KQMP-ETCEK---TWNSIISVLIRNG------LVKEAHSYLEKYPYSNIASWTNVIVGYF 280
++M E CE T +++S+ + G +K+ + K SN+ T ++ Y
Sbjct: 217 QRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLND--NKNLGSNMIVSTAMLEMYV 274
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G V VF+ M RDV W+ MI G +N E L+ F MK + P++ T S
Sbjct: 275 KCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVS 334
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
VL+ C+ L +++ G +I + V++A++ MY++CGNI A F +P D
Sbjct: 335 VLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRD 394
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
++WNS+I GLA +G+AE A+ L+ RM+ + KP++ITFVG+++AC++AG V+ G +F
Sbjct: 395 NVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFR 454
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
M++ + + P H+ C+VDL R G + +A + + +E + +WG LL A RIH
Sbjct: 455 SMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRME---VEPNVVIWGTLLSASRIH 511
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
N+++ E+AG++++ELEP+NSG Y+IL+ +Y S GR ++A ++ MK+ V+K SW
Sbjct: 512 LNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSW 571
Query: 581 IQINDGGHVFLSGDSSHPK 599
+++ D H FL GD+SHP+
Sbjct: 572 VEVEDRVHKFLVGDTSHPR 590
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 225/499 (45%), Gaps = 42/499 (8%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N +I Y K L +A +F+ + +D YN +I+ +S V A+E+FD M R +V
Sbjct: 135 NALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIV 194
Query: 85 TWNSMISGYVCNGLIDEALRVFHGM------PLKDVVSWNLVIGALVNCQRMDLAESYF- 137
+WN+MIS Y NG + +F M P + ++ L I A + M L
Sbjct: 195 SWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLN 254
Query: 138 --KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
K +G+ + S T M+ V+ G + + R +FD M +DV W+ MIAGY NG A
Sbjct: 255 DNKNLGSNMIVS-TAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEA 313
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
+LF+ M + N + + +S Q+ +T I S + GL+
Sbjct: 314 LELFENMKSAQIKP---------NDVTLVSVLSACAQLGSV--ETGERIGSYVESRGLI- 361
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
SN+ + ++ Y + G + A ++F+ + RD WN MI GL N
Sbjct: 362 -----------SNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGF 410
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN- 374
E+ + + +MKE P+N TF ++T C+ ++LG + ++++ N + +
Sbjct: 411 AEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFF-RSMRSDHNISPNIEHF 469
Query: 375 -AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
++ ++ R G + A + + +++ W +++ H E A EL + +L +
Sbjct: 470 ACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELA-ELAGK-KLLEL 527
Query: 433 KPDDITFVGVLSAC-SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
+PD+ +LS + AG + MK+K + + + V D + +F + D +
Sbjct: 528 EPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTS 587
Query: 492 MNLLNEIRA--DGIEVSPT 508
+E+ + DG+ + T
Sbjct: 588 HPRSDEVYSTIDGLALLST 606
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 143/315 (45%), Gaps = 10/315 (3%)
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+ + L+ I AR++FD++P D I Y A F MH ++
Sbjct: 35 LFIRRLLNASFIQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRI 94
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK---------EAHSY 260
I + S AI KQ+ + + SV +N L+ A
Sbjct: 95 VCFTIPPIFKSCASLLAIDVGKQVHSLVIR-YGFHSSVFCQNALINFYAKINDLGSAELI 153
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+ + ++ +I Y GEV +A ++F+ M R + WN MI +N +G
Sbjct: 154 FDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGW 213
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F +M++ P+ T +VL+IC+ L L++G +I VS AM+ MY
Sbjct: 214 IIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMY 273
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+CG + L F + D+++W+++I G A +G + +ALELFE M+ KP+D+T V
Sbjct: 274 VKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLV 333
Query: 441 GVLSACSYAGLVDQG 455
VLSAC+ G V+ G
Sbjct: 334 SVLSACAQLGSVETG 348
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 147/332 (44%), Gaps = 57/332 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF----NQMPERDMFTYNT 57
R+ + A+ LFDKM R V+WN MI Y +NG +F ++M E + T T
Sbjct: 174 RSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLAT 233
Query: 58 VIA----------GL-------------------------MQSDNVQGAKEVFDGMEVRD 82
V++ GL ++ V + VFD M RD
Sbjct: 234 VLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRD 293
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFK 138
VVTW++MI+GY NG +EAL +F M + V+ V+ A ++ E
Sbjct: 294 VVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGS 353
Query: 139 EMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ +R + S + + L+ + G I++AR++FDK+P +D WN MI G NG
Sbjct: 354 YVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAED 413
Query: 195 AEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN-----SII 245
A L+ +M + ++ ++ L+ ++ ++ + +F+ M + N I+
Sbjct: 414 AIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIV 473
Query: 246 SVLIRNGLVKEAHSYLEKYPYS-NIASWTNVI 276
+ R+G + +A+ ++ + N+ W ++
Sbjct: 474 DLFCRSGRLIDAYEFICRMEVEPNVVIWGTLL 505
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 125/265 (47%), Gaps = 16/265 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ +FD + +DT+ +N +I Y ++G + A LF++M +R + ++N +I+ Q+ +
Sbjct: 150 AELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDY 209
Query: 69 QGAKEVF----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
+F D M + +T +++S G ++ LR+ K++ S +V A+
Sbjct: 210 HKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAM 269
Query: 125 ----VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
V C +D F M RDV +W+ M+ G + GR EA +LF+ M + ++ +
Sbjct: 270 LEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPND 329
Query: 181 LMIAGYLDN----GCVGVAEDLFQKMHDRDLTSWKQLINGLV----NSRRIDAAISYFKQ 232
+ + L G V E + + R L S + + L+ I A F +
Sbjct: 330 VTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDK 389
Query: 233 MPETCEKTWNSIISVLIRNGLVKEA 257
+P+ TWNS+I L NG ++A
Sbjct: 390 LPQRDNVTWNSMIMGLAINGFAEDA 414
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 17/187 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM-- 63
I +A+ +FDK+PQRD VTWN MI G NGF ++A+ L+N+M E ++ N GLM
Sbjct: 380 IIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTA 439
Query: 64 --QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLK-D 113
+ +V+ E F M ++ N I + C +G + +A M ++ +
Sbjct: 440 CTHAGHVELGLEFFRSMRSDHNISPN--IEHFACIVDLFCRSGRLIDAYEFICRMEVEPN 497
Query: 114 VVSWNLVIGAL---VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
VV W ++ A +N + +LA E+ + ++ I+ N GR EA K+
Sbjct: 498 VVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKL 557
Query: 171 MPAKDVQ 177
M K VQ
Sbjct: 558 MKDKRVQ 564
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 189/637 (29%), Positives = 319/637 (50%), Gaps = 73/637 (11%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER----------- 50
+++ LFD++P+R+ V+WN + Y + F A+ LF +M P
Sbjct: 210 DSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT 269
Query: 51 ----------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
D F+ N ++ + ++ A VF+ ++ D+V+WN+
Sbjct: 270 GLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNA 329
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG-ALVNCQRMDLAE---SYFKEMGARD 144
+I+G V + ++AL + M + + AL C M L E + D
Sbjct: 330 VIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMD 389
Query: 145 VASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
+ S + GLV + + +AR F+ +P KD+ AWN +I+GY A LF
Sbjct: 390 MESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFV 449
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
+MH + + ++ ++ S A + Q+ C + + + +++G
Sbjct: 450 EMHKEGIGFNQTTLSTILKST---AGL----QVVHVCRQ----VHGLSVKSGF------- 491
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+S+I ++I Y + V A ++FE T D+ + MI + GEE L
Sbjct: 492 -----HSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEAL 546
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
K F++M++ PD +S+L C++L + G+Q+H +K N+++ MY
Sbjct: 547 KLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMY 606
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
A+CG+I A FS + I+SW+++I GLA HG+ +AL+LF +M P+ IT V
Sbjct: 607 AKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLV 666
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
VL AC++AGLV + + YF+ M+ + +P HY C++DLLGR G I+EA+ L+N++
Sbjct: 667 SVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMP- 725
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
E + +VWGALLGA RIH ++++G A E + LEP SG +++L +Y S G+ E+
Sbjct: 726 --FEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENV 783
Query: 561 KRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
+ M+++ VKKEPG SWI++ D + FL GD SH
Sbjct: 784 AEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSH 820
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 135/565 (23%), Positives = 248/565 (43%), Gaps = 80/565 (14%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV- 114
N +I + N A+++ D D+V+W+++ISGY NGL AL FH M L V
Sbjct: 95 NHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVK 154
Query: 115 ---VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKL 167
+++ V+ A + + + + + + N LV + +++++L
Sbjct: 155 CNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRL 214
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
FD++P ++V +WN + + Y+ G A LF +M + + ++ +VN+
Sbjct: 215 FDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNA------- 267
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVG 286
C +S +I H YL K Y N +V Y ++G++
Sbjct: 268 ---------CTGLRDSSRGKII--------HGYLIKLGYDWDPFSANALVDMYAKVGDLA 310
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
AI VFE + D+ WN +I G ++ E+ L+ QMK SG P+ T +S L C+
Sbjct: 311 DAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACA 370
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
+ +LGRQ+H+ +K+ VS ++ MY++C ++ A + F+ +P D+I+WN+
Sbjct: 371 GMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNA 430
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR---------- 456
II G + + +AL LF M + T +L + + +V R
Sbjct: 431 IISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSG 490
Query: 457 -----YYFDCMKNKYFLQPRSAH------------------YTCVVDLLGRFGLIDEAMN 493
Y + + + Y + +H +T ++ ++G +EA+
Sbjct: 491 FHSDIYVVNSLIDSY---GKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALK 547
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE------IAGERVMELEPNNSGVYLIL 547
L E++ ++ V +LL AC + + G+ + V+++ NS L
Sbjct: 548 LFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNS-----L 602
Query: 548 TEMYLSCGRREDAKRIFAQMKENGV 572
MY CG +DA R F+++ E G+
Sbjct: 603 VNMYAKCGSIDDAGRAFSELTERGI 627
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 145/301 (48%), Gaps = 21/301 (6%)
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGE 284
++SY K + + C T S+ R GL + H+++ K S+ S N ++ Y +
Sbjct: 56 SVSYSKLLSQCC--TTKSL-----RPGL--QIHAHITKSGLSDDPSIRNHLINLYSKCRN 106
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
G A K+ + + D+ W+ +I G +N LG L F +M G + TF+SVL
Sbjct: 107 FGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKA 166
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
CS + L +G+Q+H + V+N ++ MYA+C + F +P +++SW
Sbjct: 167 CSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSW 226
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR---YYFDC 461
N++ + +A+ LF M L+ KP++ + +++AC+ GL D R +
Sbjct: 227 NALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT--GLRDSSRGKIIHGYL 284
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
+K Y P SA +VD+ + G + +A+++ +I+ I W A++ C +H
Sbjct: 285 IKLGYDWDPFSA--NALVDMYAKVGDLADAISVFEKIKQPDI----VSWNAVIAGCVLHE 338
Query: 522 N 522
+
Sbjct: 339 H 339
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 194/461 (42%), Gaps = 58/461 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ +A ++F+K+ Q D V+WN +I G + + A+ L QM + ++ +++
Sbjct: 309 LADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKA 368
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISG-YVCNGLID---------EALRVFHGMPLKDVV 115
G KE+ G ++ + M S +V GL+D +A F+ +P KD++
Sbjct: 369 CAGMGLKEL--GRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLI 426
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREG---RIVEARKLFDKMP 172
+WN +I A S F EM + ++ +++ ++V + +
Sbjct: 427 AWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLS 486
Query: 173 AK-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
K D+ N +I Y V AE +F++ DL S+ +I + + A+
Sbjct: 487 VKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEAL 546
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLV--------KEAHSYLEKYPYS-NIASWTNVIVG 278
F +M + K + S L+ N K+ H ++ KY + +I + +++
Sbjct: 547 KLFLEMQDMELKPDRFVCSSLL-NACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNM 605
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G + A + F +T R + W+ MI GL ++ G + L+ F QM + G SP++ T
Sbjct: 606 YAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITL 665
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN------------AMITMYARCGNI 386
SVL C+ HA + A+ F ++ MI + R G I
Sbjct: 666 VSVLGACN-----------HAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKI 714
Query: 387 QSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELFER 426
A+ + +P S W +++ H K +EL R
Sbjct: 715 NEAVELVNKMPFEANASVWGALLGAARIH----KDVELGRR 751
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 49/278 (17%)
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA-- 389
+P + +++ +L+ C +L G QIHA K + ++ N +I +Y++C N A
Sbjct: 53 TPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARK 112
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
L++ SS P D++SW+++I G A +G AL F M L K ++ TF VL ACS
Sbjct: 113 LVDESSEP--DLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIV 170
Query: 450 ----------GLVDQGRYYFDCM----------KNKYFLQPR--------------SAHY 475
G+V + D K FL + +A +
Sbjct: 171 KDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALF 230
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
+C V + EA+ L E+ GI+ + +++ AC + G+I +++
Sbjct: 231 SCYVQI----DFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIK 286
Query: 536 L----EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
L +P ++ L +MY G DA +F ++K+
Sbjct: 287 LGYDWDPFSANA---LVDMYAKVGDLADAISVFEKIKQ 321
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 178/555 (32%), Positives = 291/555 (52%), Gaps = 23/555 (4%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV--NCQ--RMDLAESYFKEMGA 142
N ++ YV ++ ++F MPLK+VVSWN +I +V NC+ + L YF++M
Sbjct: 112 NQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVL 171
Query: 143 RDVASWTIMVNGLVREG------RIVEARKLFDKMPAKDVQAW--NLMIAGYLDNGCVGV 194
+A I +NGL+R I F D + + ++ Y G V
Sbjct: 172 EMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDE 231
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIIS---V 247
A+ F ++ RDL W +++ + A FK M K T+ S+I+ V
Sbjct: 232 AQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGV 291
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE-VGSAIKVFELMTTRDVTVWNVM 306
L GL K+ H + + + + +V + E + A K F+ M +++ W M
Sbjct: 292 LGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTM 351
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
I G G++ G+E ++ +M PD S+L+ C +L Q+HA ++
Sbjct: 352 IVGYGQHGDGKEAMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGF 411
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
F +++NA+++ Y++CG+I SA FSSV DIISW S++ A+HG +++ +E+FE+
Sbjct: 412 EAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEK 471
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
M ++ +PD + F+GVLSAC++ G V +G +YF+ M N Y + P S HYTC++DLLGR G
Sbjct: 472 MLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAG 531
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
+DEA+NLL + +E GA LGAC++H N+ + A E++ +EPN Y +
Sbjct: 532 FLDEAINLLTSMP---VEPRSDTLGAFLGACKVHRNVGLARWASEKLFVMEPNEPANYSL 588
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYL 606
++ MY S G D R+ M+E K PGCSW++I H F+S D +HP+ ++ +
Sbjct: 589 MSNMYASVGHWFDVARVRKLMRERCDFKVPGCSWMEIAGEVHTFVSRDKTHPRAVQVYGM 648
Query: 607 LNLLHTEIEREILFD 621
L+LL +E + + D
Sbjct: 649 LDLLVRLMEEDDVSD 663
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 157/387 (40%), Gaps = 76/387 (19%)
Query: 12 LFDKMPQRDTVTWNVMIRG----------------YFK--------------NGFL---- 37
+FD+MP ++ V+WN +I G YF+ NG L
Sbjct: 130 MFDEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASI 189
Query: 38 ---DNAMC------LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
D +C + + + F + ++ + V A+ FD + RD+V WN
Sbjct: 190 ELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNV 249
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA------ 142
M+S Y NG+ +A VF M L+ V N +++N + + K++
Sbjct: 250 MVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLS 309
Query: 143 --RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
DV + +V+ + I +ARK FD M K++ +W MI GY +G A L Q
Sbjct: 310 FDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQ 369
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
+M R T +L + + +S + T E V + H+Y
Sbjct: 370 EM-IRVYTYPDEL--------ALASILSSCGNLSATSE---------------VVQVHAY 405
Query: 261 LEKYPYSNIASWTNVIV-GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+ + + S N +V Y + G +GSA + F + D+ W ++ + L +EG
Sbjct: 406 VVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEG 465
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICS 346
++ F +M S PD F VL+ C+
Sbjct: 466 VEVFEKMLFSNVRPDKVAFLGVLSACA 492
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 137/318 (43%), Gaps = 60/318 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVI-- 59
+ EAQ+ FD++ RD V WNVM+ Y NG A +F M + D FT+ ++I
Sbjct: 229 VDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINS 288
Query: 60 -------------AGLM--------------------QSDNVQGAKEVFDGMEVRDVVTW 86
GL+ +++N++ A++ FDGM V+++V+W
Sbjct: 289 CGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSW 348
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV-NCQRMDLA------ESYFKE 139
+MI GY +G EA+R+ M L + +++ +C + +Y E
Sbjct: 349 TTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVE 408
Query: 140 MGARDVASWT-IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
G S +V+ + G I A + F + D+ +W ++ Y +G ++
Sbjct: 409 NGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEV 468
Query: 199 FQKMHDRDLTSWKQLINGLVNS-----------RRIDAAISYFKQMPETCEKTWNSIISV 247
F+KM ++ K G++++ + I+ ++ MP++ + + II +
Sbjct: 469 FEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDS--EHYTCIIDL 526
Query: 248 LIRNGLVKEAHSYLEKYP 265
L R G + EA + L P
Sbjct: 527 LGRAGFLDEAINLLTSMP 544
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 14/230 (6%)
Query: 332 SPDNATFTS-VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
S +F+S L I + L L G+Q+HA IK+ ++ N ++ +Y +C
Sbjct: 69 SCSTHSFSSHALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVC 128
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKAL-----ELFERMRLTDFKPDDITFVGVLSA 445
F +P+ +++SWN++ICG+ G + AL F +M L P+ IT G+L A
Sbjct: 129 KMFDEMPLKNVVSWNTLICGVV-EGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRA 187
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
V R C K + +VD +FGL+DEA + +E+ + +
Sbjct: 188 SIELNDVGICR-QLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDL-- 244
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
+W ++ +C N ++ ++M LE G T M SCG
Sbjct: 245 --VLWNVMV-SCYALNGVQGKAFGVFKLMRLE-GVKGDNFTFTSMINSCG 290
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 102/248 (41%), Gaps = 44/248 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N I++A+ FD M ++ V+W MI GY ++G AM L +M + +A
Sbjct: 326 KNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDELALAS 385
Query: 62 LMQS-DNVQGAKEVF--------DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++ S N+ EV +G E + N+++S Y G I A + F +
Sbjct: 386 ILSSCGNLSATSEVVQVHAYVVENGFEAFLSIA-NALVSAYSKCGSIGSAFQSFSSVAEP 444
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
D++SW ++GA +GL +EG V + LF +
Sbjct: 445 DIISWTSLMGAYA--------------------------FHGLSKEGVEVFEKMLFSNVR 478
Query: 173 AKDVQAWNLMIA----GYLDNGC--VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
V ++ A G++ G + +++Q M D + + +I+ L + +D A
Sbjct: 479 PDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSE--HYTCIIDLLGRAGFLDEA 536
Query: 227 ISYFKQMP 234
I+ MP
Sbjct: 537 INLLTSMP 544
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 193/645 (29%), Positives = 328/645 (50%), Gaps = 41/645 (6%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFK----NGFLDNAMCLFNQMPERDMFTYNTVI---AGLMQ 64
+FD++ +R+ V+WN +I L+ C+ ++ E FT +V+ + L
Sbjct: 68 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 127
Query: 65 SDNVQGAKEVFD-GMEVRDVVTW--NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
+ + K+V G+ ++ ++ N++++ Y G + + + +D+V+WN V+
Sbjct: 128 PEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 187
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNG---------LVREGRIVEARKLFDKMP 172
+L +++ A Y +EM V ++ ++R G+ + A L +
Sbjct: 188 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 247
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
++ + ++ Y + V +F M DR + W +I G + A+ F
Sbjct: 248 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 307
Query: 233 MPETCEKTWNS-----IISVLIRNGLV--KEA-HSYLEKYPYSNIASWTNVIVG-YFEMG 283
M E+ NS ++ +R+G KEA H ++ K N ++ Y +G
Sbjct: 308 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 367
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK------ESGPS----- 332
++ A+++F M RD+ WN MI G ++ E+ L +M+ G S
Sbjct: 368 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 427
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P++ T ++L C+ L L G++IHA AIK V +A++ MYA+CG +Q +
Sbjct: 428 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 487
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F +P ++I+WN II HG ++A++L M + KP+++TF+ V +ACS++G+V
Sbjct: 488 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 547
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
D+G F MK Y ++P S HY CVVDLLGR G I EA L+N + D + W +
Sbjct: 548 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG--AWSS 605
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LLGA RIHNN+++GEIA + +++LEPN + Y++L +Y S G + A + MKE GV
Sbjct: 606 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 665
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
+KEPGCSWI+ D H F++GDSSHP+ +L L L + +E
Sbjct: 666 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE 710
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 124/535 (23%), Positives = 235/535 (43%), Gaps = 55/535 (10%)
Query: 77 GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESY 136
G V V N++++ Y G +VF + ++ VSWN +I +L + ++ ++A
Sbjct: 40 GYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA 99
Query: 137 FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW------------NLMIA 184
F+ M +V + + +V + + M K V A+ N ++A
Sbjct: 100 FRCMLDENVEPSSFTLVSVVTACSNLPMPEGL--MMGKQVHAYGLRKGELNSFIINTLVA 157
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWNS 243
Y G + ++ L RDL +W +++ L + ++ A+ Y ++M E E +
Sbjct: 158 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 217
Query: 244 IISVL--------IRNGLVKEAHSYLEKYPYSNIASW--TNVIVGYFEMGEVGSAIKVFE 293
I SVL +R G KE H+Y K + S+ + ++ Y +V S +VF+
Sbjct: 218 ISSVLPACSHLEMLRTG--KELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 275
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES-GPSPDNATFTSVLTICSDLPTLD 352
M R + +WN MI G +N+ +E L F+ M+ES G ++ T V+ C
Sbjct: 276 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 335
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
IH +K ++ V N ++ MY+R G I A+ F + D+++WN++I G
Sbjct: 336 RKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 395
Query: 413 YHGYAEKALELFERMR-----------LTDFKPDDITFVGVLSACSYAGLVDQGR-YYFD 460
+ + E AL L +M+ KP+ IT + +L +C+ + +G+ +
Sbjct: 396 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 455
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
+KN L A + +VD+ + G + + + ++I + W ++ A +H
Sbjct: 456 AIKNN--LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNV----ITWNVIIMAYGMH 509
Query: 521 NNIK--VGEIAGERVMELEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKEN 570
N + + + V ++PN + ++ +C G ++ RIF MK +
Sbjct: 510 GNGQEAIDLLRMMMVQGVKPNE----VTFISVFAACSHSGMVDEGLRIFYVMKPD 560
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 110/210 (52%), Gaps = 8/210 (3%)
Query: 253 LVKEAHSYLEKYPYS-NIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
L K+ H+++ K+ Y + + N +V Y + G+ G+ KVF+ ++ R+ WN +I L
Sbjct: 28 LGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSL 87
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT---LDLGRQIHAQAIKIAR- 366
+ E L+ F M + P + T SV+T CS+LP L +G+Q+HA ++
Sbjct: 88 CSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL 147
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
N F + N ++ MY + G + S+ + S D+++WN+++ L + +ALE
Sbjct: 148 NSF--IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 205
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
M L +PD+ T VL ACS+ ++ G+
Sbjct: 206 MVLEGVEPDEFTISSVLPACSHLEMLRTGK 235
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 35/273 (12%)
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN-QFTTVSNAMITMYARCGNIQS 388
G PDN F ++L +DL ++LG+QIHA K TV+N ++ +Y +CG+ +
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
F + + +SWNS+I L E ALE F M + +P T V V++ACS
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124
Query: 449 ----AGLVDQGRYYFDCMK----NKYFLQPRSAHYTCVVD------LLGRFGLID----- 489
GL+ + + ++ N + + A Y + LLG FG D
Sbjct: 125 LPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 184
Query: 490 -------------EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
EA+ L E+ +G+E ++L AC ++ G+ ++
Sbjct: 185 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 244
Query: 537 EP--NNSGVYLILTEMYLSCGRREDAKRIFAQM 567
NS V L +MY +C + +R+F M
Sbjct: 245 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 277
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 148/358 (41%), Gaps = 75/358 (20%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--------------- 49
++ + +FD M R WN MI GY +N A+ LF M E
Sbjct: 266 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 325
Query: 50 -------------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
RD F NT++ + + A +F ME RD+V
Sbjct: 326 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 385
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMP-LKDVVSWN-----------LVIGALVNCQRM-- 130
TWN+MI+GYV + ++AL + H M L+ VS ++ L +C +
Sbjct: 386 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 445
Query: 131 -----DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
++ K A DVA + +V+ + G + +RK+FD++P K+V WN++I
Sbjct: 446 LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMA 505
Query: 186 YLDNGCVGVAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMP-----ET 236
Y +G A DL + M + + ++ + +S +D + F M E
Sbjct: 506 YGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEP 565
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYP--YSNIASWTNV-----IVGYFEMGEVGS 287
+ ++ +L R G +KEA+ + P ++ +W+++ I E+GE+ +
Sbjct: 566 SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAA 623
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDM------- 52
R +I A +F KM RD VTWN MI GY + ++A+ L ++M ER +
Sbjct: 365 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 424
Query: 53 ------FTYNTVIAGLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEA 102
T T++ + KE+ DV ++++ Y G + +
Sbjct: 425 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMS 484
Query: 103 LRVFHGMPLKDVVSWNLVIGA 123
+VF +P K+V++WN++I A
Sbjct: 485 RKVFDQIPQKNVITWNVIIMA 505
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 193/646 (29%), Positives = 328/646 (50%), Gaps = 41/646 (6%)
Query: 11 NLFDKMPQRDTVTWNVMIRGYFK----NGFLDNAMCLFNQMPERDMFTYNTVI---AGLM 63
+FD++ +R+ V+WN +I L+ C+ ++ E FT +V+ + L
Sbjct: 154 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 64 QSDNVQGAKEVFD-GMEVRDVVTW--NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
+ + K+V G+ ++ ++ N++++ Y G + + + +D+V+WN V
Sbjct: 214 MPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNG---------LVREGRIVEARKLFDKM 171
+ +L +++ A Y +EM V ++ ++R G+ + A L +
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
++ + ++ Y + V +F M DR + W +I G + A+ F
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 232 QMPETCEKTWNS-----IISVLIRNGLV--KEA-HSYLEKYPYSNIASWTNVIVG-YFEM 282
M E+ NS ++ +R+G KEA H ++ K N ++ Y +
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK------ESGPS---- 332
G++ A+++F M RD+ WN MI G ++ E+ L +M+ G S
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 333 -PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
P++ T ++L C+ L L G++IHA AIK V +A++ MYA+CG +Q +
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F +P ++I+WN II HG ++A++L M + KP+++TF+ V +ACS++G+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
VD+G F MK Y ++P S HY CVVDLLGR G I EA L+N + D + W
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG--AWS 691
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
+LLGA RIHNN+++GEIA + +++LEPN + Y++L +Y S G + A + MKE G
Sbjct: 692 SLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQG 751
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
V+KEPGCSWI+ D H F++GDSSHP+ +L L L + +E
Sbjct: 752 VRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE 797
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 132/601 (21%), Positives = 259/601 (43%), Gaps = 72/601 (11%)
Query: 24 WNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGLMQSDNVQGAKEVFD--- 76
W ++R ++ L A+ + M + D + + ++ + +++ K++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 77 --GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAE 134
G V V N++++ Y G +VF + ++ VSWN +I +L + ++ ++A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW------------NLM 182
F+ M +V + + +V + + M K V A+ N +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL--MMGKQVHAYGLRKGELNSFIINTL 242
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM----PETCE 238
+A Y G + ++ L RDL +W +++ L + ++ A+ Y ++M E E
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 239 KTWNSIISV-----LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEMGEVGS 287
T +S++ ++R G KE H+Y K N + N VG Y +V S
Sbjct: 303 FTISSVLPACSHLEMLRTG--KELHAYALK----NGSLDENSFVGSALVDMYCNCKQVLS 356
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES-GPSPDNATFTSVLTICS 346
+VF+ M R + +WN MI G +N+ +E L F+ M+ES G ++ T V+ C
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
IH +K ++ V N ++ MY+R G I A+ F + D+++WN+
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476
Query: 407 IICGLAYHGYAEKALELFERMR-----------LTDFKPDDITFVGVLSACSYAGLVDQG 455
+I G + + E AL L +M+ KP+ IT + +L +C+ + +G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536
Query: 456 R-YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
+ + +KN L A + +VD+ + G + + + ++I + W ++
Sbjct: 537 KEIHAYAIKNN--LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNV----ITWNVII 590
Query: 515 GACRIHNNIK--VGEIAGERVMELEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKE 569
A +H N + + + V ++PN + ++ +C G ++ RIF MK
Sbjct: 591 MAYGMHGNGQEAIDLLRMMMVQGVKPNE----VTFISVFAACSHSGMVDEGLRIFYVMKP 646
Query: 570 N 570
+
Sbjct: 647 D 647
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 143/341 (41%), Gaps = 38/341 (11%)
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
K+PY A+ T+ V A +F + +R W ++ ++L E +
Sbjct: 27 HKHPYLLRATPTSATEDV--ASAVSGAPSIF-ISQSRSPEWWIDLLRSKVRSNLLREAVL 83
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN-QFTTVSNAMITMY 380
+V M G PDN F ++L +DL ++LG+QIHA K TV+N ++ +Y
Sbjct: 84 TYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLY 143
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+CG+ + F + + +SWNS+I L E ALE F M + +P T V
Sbjct: 144 RKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLV 203
Query: 441 GVLSACSY----AGLVDQGRYYFDCMK----NKYFLQPRSAHYTCVVD------LLGRFG 486
V++ACS GL+ + + ++ N + + A Y + LLG FG
Sbjct: 204 SVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG 263
Query: 487 LID------------------EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
D EA+ L E+ +G+E ++L AC ++ G+
Sbjct: 264 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 323
Query: 529 AGERVMELEP--NNSGVYLILTEMYLSCGRREDAKRIFAQM 567
++ NS V L +MY +C + +R+F M
Sbjct: 324 LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 148/358 (41%), Gaps = 75/358 (20%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--------------- 49
++ + +FD M R WN MI GY +N A+ LF M E
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 50 -------------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
RD F NT++ + + A +F ME RD+V
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMP-LKDVVSWN-----------LVIGALVNCQRM-- 130
TWN+MI+GYV + ++AL + H M L+ VS ++ L +C +
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 131 -----DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
++ K A DVA + +V+ + G + +RK+FD++P K+V WN++I
Sbjct: 533 LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMA 592
Query: 186 YLDNGCVGVAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMP-----ET 236
Y +G A DL + M + + ++ + +S +D + F M E
Sbjct: 593 YGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEP 652
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYP--YSNIASWTNV-----IVGYFEMGEVGS 287
+ ++ +L R G +KEA+ + P ++ +W+++ I E+GE+ +
Sbjct: 653 SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAA 710
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDM------- 52
R +I A +F KM RD VTWN MI GY + ++A+ L ++M ER +
Sbjct: 452 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 511
Query: 53 ------FTYNTVIAGLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEA 102
T T++ + KE+ DV ++++ Y G + +
Sbjct: 512 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMS 571
Query: 103 LRVFHGMPLKDVVSWNLVIGA 123
+VF +P K+V++WN++I A
Sbjct: 572 RKVFDQIPQKNVITWNVIIMA 592
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 212/761 (27%), Positives = 347/761 (45%), Gaps = 151/761 (19%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYN 56
R +A +LFD +P+ TV WN +I G+ N +A+ + +M P+ D +T++
Sbjct: 49 RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFS 108
Query: 57 TVIAGLMQS------------------------------------------------DNV 68
+ + Q+ +N
Sbjct: 109 STLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNC 168
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGAL 124
+ VFD M R+VV WN+MIS YV + EA ++F M + VS+ V A+
Sbjct: 169 DLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAV 228
Query: 125 VNCQRMDLAESYFK---EMGARDVASWTIMVNGL---VREGRIVEARKLFDKMPAKDVQA 178
D A + ++G+ V + ++ + + G + AR++FD ++ +
Sbjct: 229 WRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEV 288
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRD------------LTSWKQL------------- 213
WN MI GY+ N C A DLF ++ + + LT+ QL
Sbjct: 289 WNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYI 348
Query: 214 -----------INGLV--NSR--RIDAAISYFKQMPETCEKTWNSIISVLIRNGL----- 253
+N ++ SR I + F M E TWN+++S ++NGL
Sbjct: 349 LKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGL 408
Query: 254 ---------------------------------VKEAHSYLEKYPYSNIASWTNVIVGYF 280
K+AH+YL ++ +I Y
Sbjct: 409 MLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGYLIDMYA 468
Query: 281 EMGEVGSAIKVFELMTT--RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ G + +A ++FE + RD WN MI G +N L EEG F +M E P+ T
Sbjct: 469 KSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTL 528
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
S+L C+ + T+ LG+QIH AI+ NQ V A++ MY++ G I A F+
Sbjct: 529 ASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLE 588
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
+ +++ ++I HG E+AL LF M + KPD +TFV +LSACSYAGLVD+G
Sbjct: 589 KNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRI 648
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F M+ +Y +QP S HY CV D+LGR G + EA + + +G +WG+LLGACR
Sbjct: 649 FQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFR--IWGSLLGACR 706
Query: 519 IHNNIKVGEIAGERVMELEPNN--SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
IH ++G++ +++E+E + +G +++L+ +Y + G ++ R+ +M++ G+ KE
Sbjct: 707 IHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEA 766
Query: 577 GCSWIQINDGGHV--FLSGDSSHPKFHRLRYLLNLLHTEIE 615
GCSW+++ GHV F+S D HP+ + +L L E++
Sbjct: 767 GCSWVEV--AGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMK 805
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 150/652 (23%), Positives = 268/652 (41%), Gaps = 142/652 (21%)
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-----PLKD 113
++ L + + A +FD + V WN++I G++CN + +AL + M P D
Sbjct: 44 LSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFD 103
Query: 114 VVSW-----------NLVIGALVNCQRM-------------------------------- 130
++ +L +G ++C +
Sbjct: 104 SYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAY 163
Query: 131 -----DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM-------------- 171
DL F M R+V +W M++ V+ R++EA K+F M
Sbjct: 164 DFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVN 223
Query: 172 --PA----KDVQAWNLM---------------------IAGYLDNGCVGVAEDLFQKMHD 204
PA D N++ I Y + GCV A ++F +
Sbjct: 224 VFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLE 283
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI--------ISVLIRNGLVKE 256
R+ W +I G V + AI F Q+ E+ + + + IS L L ++
Sbjct: 284 RNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQ 343
Query: 257 AHSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
H+Y L+ + +IV Y G +G++ KVF M RDV WN M+ +N L
Sbjct: 344 LHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGL 403
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
+EGL +M++ G D+ T T++L++ S+L + ++G+Q HA I+ QF +
Sbjct: 404 DDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGI-QFEGMDGY 462
Query: 376 MITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
+I MYA+ G I +A L E +S D +WN++I G +G +E+ +F +M + +
Sbjct: 463 LIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVR 522
Query: 434 PDDITFVGVLSACSYAGLVDQGR----YYFDCMKNKYF---------------------- 467
P+ +T +L AC+ G + G+ + C N+
Sbjct: 523 PNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENV 582
Query: 468 ----LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR----I 519
L+ S YT ++ G+ G+ + A++L + + GI+ + A+L AC +
Sbjct: 583 FAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLV 642
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
+++ + + ER +++P +S Y + +M GR +A + E G
Sbjct: 643 DEGLRIFQ-SMEREYKIQP-SSEHYCCVADMLGRVGRVXEAYEFVKGLGEEG 692
>gi|359497527|ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/436 (36%), Positives = 256/436 (58%), Gaps = 6/436 (1%)
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
T +V+ + G + ARK+FD+M ++V +WN M+AGYL +G + VA+ +F ++ +D+
Sbjct: 147 TALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVI 206
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
SW +I+G + ++ A+S F+QMPE +WN++IS + G + A S+ + P N
Sbjct: 207 SWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDIDSARSFFDAMPQRN 266
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-- 326
SW +I GY + G+V SA ++F+ + +D+ ++N MI +N +E LK F M
Sbjct: 267 NVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLN 326
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
+ PD T SV++ CS L L G I + ++ ++ A++ +YA+CG+I
Sbjct: 327 PDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSI 386
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
A F + D++++ ++I G +G A A++LF+ M P+ ITF+G+L+A
Sbjct: 387 DKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAY 446
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
++AGLV++G + F MK KY L P HY +VDL GR G + EA+ L I++ ++
Sbjct: 447 NHAGLVEEGYHCFTSMK-KYNLVPSVDHYGIMVDLFGRAGRLQEALEL---IKSMPMQPH 502
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
VWGALL ACR+HNN++ GEIA + ELEP+ +G +L+ +Y S R +D KR+
Sbjct: 503 AGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYCSLLSNIYASGERWDDVKRLRKV 562
Query: 567 MKENGVKKEPGCSWIQ 582
KE G K PGCSW++
Sbjct: 563 TKEKGFSKIPGCSWME 578
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 199/425 (46%), Gaps = 32/425 (7%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
++ Y K G ++ A +F++M ER++ ++N+++AG ++S ++ A+ VFD + +DV+
Sbjct: 147 TALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVI 206
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
+WNSMISGY G +++AL +F MP ++ SWN +I V +D A S+F M R+
Sbjct: 207 SWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDIDSARSFFDAMPQRN 266
Query: 145 VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD 204
SW M++G + G + A +LFD++ KD+ +N MIA Y N A LF M +
Sbjct: 267 NVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLN 326
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
D +N + + + IS Q+ + W I S + R G+ + H
Sbjct: 327 PD-------VNVQPDEMTLASVISACSQLGDLRFGPW--IESYMRRLGIEMDGHLA---- 373
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
T ++ Y + G + A ++F + +D+ + MI G G N + +K F
Sbjct: 374 --------TALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFD 425
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
+M ++ P++ TF +LT + ++ G K M+ ++ R G
Sbjct: 426 EMVDAQIFPNSITFIGLLTAYNHAGLVEEGYHCFTSMKKYNLVPSVDHYGIMVDLFGRAG 485
Query: 385 NIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAE----KALELFERMRLTDFKPDDITF 439
+Q AL S+P+ W +++ H E A FE +PD +
Sbjct: 486 RLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFE------LEPDTTGY 539
Query: 440 VGVLS 444
+LS
Sbjct: 540 CSLLS 544
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 178/371 (47%), Gaps = 39/371 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+++ + AQ +FD++PQ+D ++WN MI GY + G ++ A+ LF QMPER+ ++N +I+
Sbjct: 185 LKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMIS 244
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ ++ A+ FD M R+ V+W +MISGY G +D A +F + KD++ +N +
Sbjct: 245 GYVEFGDIDSARSFFDAMPQRNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAM 304
Query: 121 IGALVNCQRMDLAESYFKEMGARDV---------ASWTIMVNGL--VREGRIVEA--RKL 167
I R A F M DV AS + L +R G +E+ R+L
Sbjct: 305 IACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRL 364
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL-VNSRRIDAA 226
+M D ++ Y G + A +LF + +DL ++ +I G +N + ID A
Sbjct: 365 GIEM---DGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAID-A 420
Query: 227 ISYFKQMPETC----EKTWNSIISVLIRNGLVKEAH---SYLEKYPYSNIASWTNVIVGY 279
I F +M + T+ +++ GLV+E + + ++KY ++V
Sbjct: 421 IKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYHCFTSMKKYNLVPSVDHYGIMVDL 480
Query: 280 FEMGEVGSAIKVFELMTTRDVT----VWNVMIFG--LGEN-DLGEEGLKFFVQMKESGPS 332
F G G + EL+ + + VW ++ L N + GE + +++
Sbjct: 481 F--GRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELE----- 533
Query: 333 PDNATFTSVLT 343
PD + S+L+
Sbjct: 534 PDTTGYCSLLS 544
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 110/267 (41%), Gaps = 27/267 (10%)
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN---QFTTVS 373
+E +VQM+ G P +S L C+ + G IH Q K + V
Sbjct: 87 KEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGLSIHGQVQKFGFSGGGDGIYVE 146
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
A++ Y + G+++ A F + +++SWNS++ G G A +F+ + +
Sbjct: 147 TALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIP----Q 202
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
D I++ ++S + AG +++ F M + F A + ++ FG ID A +
Sbjct: 203 KDVISWNSMISGYARAGDMEKALSLFQQMPERNF-----ASWNAMISGYVEFGDIDSARS 257
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
+ + + + W + I K G++ + EL G L+L ++
Sbjct: 258 FFDAMP----QRNNVSWMTM-----ISGYSKCGDV--DSACELFDQVGGKDLLLFNAMIA 306
Query: 554 C----GRREDAKRIFAQMKENGVKKEP 576
C R ++A ++F M V +P
Sbjct: 307 CYAQNSRPKEALKLFNNMLNPDVNVQP 333
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 193/646 (29%), Positives = 328/646 (50%), Gaps = 41/646 (6%)
Query: 11 NLFDKMPQRDTVTWNVMIRGYFK----NGFLDNAMCLFNQMPERDMFTYNTVI---AGLM 63
+FD++ +R+ V+WN +I L+ C+ ++ E FT +V+ + L
Sbjct: 154 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 64 QSDNVQGAKEVFD-GMEVRDVVTW--NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
+ + K+V G+ ++ ++ N++++ Y G + + + +D+V+WN V
Sbjct: 214 MPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 273
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNG---------LVREGRIVEARKLFDKM 171
+ +L +++ A Y +EM V ++ ++R G+ + A L +
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
++ + ++ Y + V +F M DR + W +I G + A+ F
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 232 QMPETCEKTWNS-----IISVLIRNGLV--KEA-HSYLEKYPYSNIASWTNVIVG-YFEM 282
M E+ NS ++ +R+G KEA H ++ K N ++ Y +
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK------ESGPS---- 332
G++ A+++F M RD+ WN MI G ++ E+ L +M+ G S
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 333 -PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
P++ T ++L C+ L L G++IHA AIK V +A++ MYA+CG +Q +
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F +P ++I+WN II HG ++A++L M + KP+++TF+ V +ACS++G+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
VD+G F MK Y ++P S HY CVVDLLGR G I EA L+N + D + W
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG--AWS 691
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
+LLGA RIHNN+++GEIA + +++LEPN + Y++L +Y S G + A + MKE G
Sbjct: 692 SLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQG 751
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
V+KEPGCSWI+ D H F++GDSSHP+ +L L L + +E
Sbjct: 752 VRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKE 797
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 132/601 (21%), Positives = 259/601 (43%), Gaps = 72/601 (11%)
Query: 24 WNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGLMQSDNVQGAKEVFD--- 76
W ++R ++ L A+ + M + D + + ++ + +++ K++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 77 --GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAE 134
G V V N++++ Y G +VF + ++ VSWN +I +L + ++ ++A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW------------NLM 182
F+ M +V + + +V + + M K V A+ N +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL--MMGKQVHAYGLRKGELNSFIINTL 242
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM----PETCE 238
+A Y G + ++ L RDL +W +++ L + ++ A+ Y ++M E E
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 239 KTWNSIISV-----LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEMGEVGS 287
T +S++ ++R G KE H+Y K N + N VG Y +V S
Sbjct: 303 FTISSVLPACSHLEMLRTG--KELHAYALK----NGSLDENSFVGSALVDMYCNCKQVLS 356
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES-GPSPDNATFTSVLTICS 346
+VF+ M R + +WN MI G +N+ +E L F+ M+ES G ++ T V+ C
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
IH +K ++ V N ++ MY+R G I A+ F + D+++WN+
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476
Query: 407 IICGLAYHGYAEKALELFERMR-----------LTDFKPDDITFVGVLSACSYAGLVDQG 455
+I G + + E AL L +M+ KP+ IT + +L +C+ + +G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536
Query: 456 R-YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
+ + +KN L A + +VD+ + G + + + ++I + W ++
Sbjct: 537 KEIHAYAIKNN--LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNV----ITWNVII 590
Query: 515 GACRIHNNIK--VGEIAGERVMELEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKE 569
A +H N + + + V ++PN + ++ +C G ++ RIF MK
Sbjct: 591 MAYGMHGNGQEAIDLLRMMMVQGVKPNE----VTFISVFAACSHSGMVDEGLRIFYVMKP 646
Query: 570 N 570
+
Sbjct: 647 D 647
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 143/341 (41%), Gaps = 38/341 (11%)
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
K+PY A+ T+ V A +F + +R W ++ ++L E +
Sbjct: 27 HKHPYLLRATPTSATEDV--ASAVSGAPSIF-ISQSRSPEWWIDLLRSKVRSNLLREAVL 83
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN-QFTTVSNAMITMY 380
+V M G PDN F ++L +DL ++LG+QIHA K TV+N ++ +Y
Sbjct: 84 TYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLY 143
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+CG+ + F + + +SWNS+I L E ALE F M + +P T V
Sbjct: 144 RKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLV 203
Query: 441 GVLSACSY----AGLVDQGRYYFDCMK----NKYFLQPRSAHYTCVVD------LLGRFG 486
V++ACS GL+ + + ++ N + + A Y + LLG FG
Sbjct: 204 SVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG 263
Query: 487 LID------------------EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
D EA+ L E+ +G+E ++L AC ++ G+
Sbjct: 264 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 323
Query: 529 AGERVMELEP--NNSGVYLILTEMYLSCGRREDAKRIFAQM 567
++ NS V L +MY +C + +R+F M
Sbjct: 324 LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 148/358 (41%), Gaps = 75/358 (20%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--------------- 49
++ + +FD M R WN MI GY +N A+ LF M E
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 50 -------------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
RD F NT++ + + A +F ME RD+V
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMP-LKDVVSWN-----------LVIGALVNCQRM-- 130
TWN+MI+GYV + ++AL + H M L+ VS ++ L +C +
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 131 -----DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
++ K A DVA + +V+ + G + +RK+FD++P K+V WN++I
Sbjct: 533 LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMA 592
Query: 186 YLDNGCVGVAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMP-----ET 236
Y +G A DL + M + + ++ + +S +D + F M E
Sbjct: 593 YGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEP 652
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYP--YSNIASWTNV-----IVGYFEMGEVGS 287
+ ++ +L R G +KEA+ + P ++ +W+++ I E+GE+ +
Sbjct: 653 SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAA 710
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDM------- 52
R +I A +F KM RD VTWN MI GY + ++A+ L ++M ER +
Sbjct: 452 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 511
Query: 53 ------FTYNTVIAGLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEA 102
T T++ + KE+ DV ++++ Y G + +
Sbjct: 512 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMS 571
Query: 103 LRVFHGMPLKDVVSWNLVIGA 123
+VF +P K+V++WN++I A
Sbjct: 572 RKVFDQIPQKNVITWNVIIMA 592
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 182/561 (32%), Positives = 290/561 (51%), Gaps = 27/561 (4%)
Query: 77 GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESY 136
G+ V T S++ Y+ G I EA +VF M +DV +WN ++ L R A
Sbjct: 97 GLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGL 156
Query: 137 FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA--------KDVQAWNLMIAGYLD 188
F M VA T+ V+ ++ ++ + L M K++ N +I Y
Sbjct: 157 FGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGK 216
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWN 242
G + A+ +F M RDL +W +I+G + AA+ F+ M P+ T
Sbjct: 217 LGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVL--TLV 274
Query: 243 SIISVLIRNG---LVKEAHSYLEK--YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
S+ S + + G K H Y+ + + +I + ++ Y ++ + +A ++F+ M
Sbjct: 275 SLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPV 334
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+D WN +I G +N L E ++ + M K G TF SVL S L L G +
Sbjct: 335 QDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMR 394
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
+HA +IKI N V +I +YA+CG + A+L F +P WN+II GL HG+
Sbjct: 395 MHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGH 454
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
+AL LF RM+ KPD +TFV +L+ACS+AGLVDQGR +FD M+ Y + P + HY
Sbjct: 455 GAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYA 514
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
C+ D+LGR G +DEA N + + I+ VWGALLGACRIH N+++G++A + + EL
Sbjct: 515 CMADMLGRAGQLDEAFNFIQNMP---IKPDSAVWGALLGACRIHGNVEMGKVASQNLFEL 571
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSS 596
+P N G Y++++ MY G+ + + + ++ ++K PG S I++ +VF SG+ +
Sbjct: 572 DPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQT 631
Query: 597 --HPKFHRLRYLLNLLHTEIE 615
HP+ ++ L L +I
Sbjct: 632 EPHPQHEEIQAELRSLLAKIR 652
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 211/503 (41%), Gaps = 92/503 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------ 48
+R RI EA +FD+M +RD WN M+ G +N A+ LF +M
Sbjct: 114 LRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVS 173
Query: 49 ---------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
++++F N +I + ++ A+ VF GME R
Sbjct: 174 SVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECR 233
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAES-- 135
D+VTWNS+ISG G AL++F GM DV++ + A+ A+S
Sbjct: 234 DLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLH 293
Query: 136 -YFKEMG--ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
Y G D+ + +V+ + I A+++FD MP +D +WN +I GY+ NG
Sbjct: 294 CYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLA 353
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A + + M + GL + + T+ S++ G
Sbjct: 354 NEAVERYGHMQKHE---------GL-----------------KAIQGTFVSVLPAYSHLG 387
Query: 253 LVKEA---HSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+++ H+ K + ++ T +I Y + G++ A+ +FE M R WN +I
Sbjct: 388 ALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIIS 447
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR------QIHAQAI 362
GLG + G E L F +M++ G PD+ TF S+L CS +D GR Q+ +
Sbjct: 448 GLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIV 507
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKAL 421
IA++ M M R G + A ++PI D W +++ HG E +
Sbjct: 508 PIAKHY-----ACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVE--M 560
Query: 422 ELFERMRLTDFKPDDITFVGVLS 444
L + P+++ + ++S
Sbjct: 561 GKVASQNLFELDPENVGYYVLMS 583
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 208/667 (31%), Positives = 332/667 (49%), Gaps = 80/667 (11%)
Query: 4 ARIQEAQNLFDKMPQR--DTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTY 55
+ ++ A+++FDKMP R + V WN++IR Y NG + A+ L+ +M P R F +
Sbjct: 65 SELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPF 124
Query: 56 -----------------NTVIAGLMQSDNV----------------QGAKEVFDGMEVRD 82
+ I L NV AKEVFD M RD
Sbjct: 125 VLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRD 184
Query: 83 VVTWNSMISGYVCN-GLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
VV WNSMISG+ + G DE R+ M + + ++G L +++ + + KE+
Sbjct: 185 VVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVN-SLRHGKEIH 243
Query: 142 A--------RDVASWTIMVNGLVREGRIVEARKLFDKMP-AKDVQAWNLMIAGYLDNGCV 192
DV T +++ + I AR++FD M K+ W+ M+ Y+ +
Sbjct: 244 GFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFM 303
Query: 193 GVAEDLFQK--MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
A +LF + M D+ + L R+ A ++ TC + I+
Sbjct: 304 REALELFCQLLMLKDDVIVLSAVT--LATVIRVCANLTDLST--GTCLHCYA------IK 353
Query: 251 NGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
+G V + + ++ Y + G + A++ F M RD + +I G
Sbjct: 354 SGFVLD------------LMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGY 401
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+N EEGL+ F++M+ SG +P+ AT SVL C+ L L G H AI T
Sbjct: 402 VQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADT 461
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
+ NA+I MYA+CG I +A F + I+SWN++I HG +AL LF+ M+
Sbjct: 462 MICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSE 521
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
KPDD+TF+ ++SACS++GLV +G+Y+F+ M + + PR HY C+VDLL R GL E
Sbjct: 522 GLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKE 581
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
+ + ++ +E VWGALL ACR++ N+++GE +++ +L P ++G +++L+ M
Sbjct: 582 VHSFIEKMP---LEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNM 638
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD-SSHPKFHRLRYLLNL 609
Y + GR +DA ++ KE G +K PGCSWI+I+ H FL G SHP+ ++ L+
Sbjct: 639 YSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDE 698
Query: 610 LHTEIER 616
L E++R
Sbjct: 699 LLVEMKR 705
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 132/330 (40%), Gaps = 40/330 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ +I A+ +FD+M +R V+WN MI Y +G A+ LF+ M D T+
Sbjct: 473 KCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFIC 532
Query: 58 VIAGLMQSDNVQGAKEVFDGME-----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
+I+ S V K F+ M + + + M+ GL E MPL+
Sbjct: 533 LISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLE 592
Query: 113 -DVVSWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGRIVEARKL- 167
DV W ++ A + ++L E K ++G ++ ++ N GR +A ++
Sbjct: 593 PDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVR 652
Query: 168 -------FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
F+K P + ++ +L G + H + +L LV
Sbjct: 653 FTQKEQGFEKSPGCSWIEISGVVHTFLGGG---------YRSHPQLTQISNKLDELLVEM 703
Query: 221 RRI--DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+R+ A SY Q E EK +L + + A L P +I N+ V
Sbjct: 704 KRLGYQAESSYVFQDVEEEEKER----VLLYHSEKLAIAFGILSLSPDKHIIVTKNLRV- 758
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
G+ +AIK L+T RD+TV + F
Sbjct: 759 ---CGDCHTAIKFISLVTKRDITVRDASRF 785
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 11/185 (5%)
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
LE+ +V + I S+ G H + K L LT+F V + ACS
Sbjct: 9 LEYCTVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELK 68
Query: 451 LVDQGRYYFDCMKNKYFLQPRSA-HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
+ R+ FD M ++ P++ + ++ G +EA++L ++ GI +
Sbjct: 69 I---ARHVFDKMPHR----PKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFT 121
Query: 510 WGALLGACRIHNNIKVG-EIAGE-RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ +L AC G EI + + + LE +N V L + Y CG +DAK +F +M
Sbjct: 122 FPFVLKACSALKEASEGREIHCDIKRLRLE-SNVYVSTALVDFYAKCGCLDDAKEVFDKM 180
Query: 568 KENGV 572
+ V
Sbjct: 181 HKRDV 185
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 194/626 (30%), Positives = 321/626 (51%), Gaps = 35/626 (5%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMP-----ERDMFTYNTVIAGLMQSDNVQGAKEV 74
D WN ++ Y N A+ LF+Q+ D +TY V+ V + +
Sbjct: 69 DVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRI 128
Query: 75 FDGME----VRDVVTWNSMISGYV-CNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQR 129
+ + + DV +S+++ Y C+ +D A+++F P +DV WN VI +
Sbjct: 129 HNHLLKTGLIWDVFVGSSLMNMYAKCDQFVD-AIKLFDEFPQRDVGCWNAVISCYFKDGK 187
Query: 130 MDLAESYF---KEMGAR-DVASWTIMVNGLVR-----EGRIVEARKLFDKMPAKDVQAWN 180
++A F KE+G + ++T++V+ R G+ V R+L ++ D +
Sbjct: 188 AEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVH-RELIERRILLDAFVLS 246
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK- 239
++ Y GC+ +A+++F+K+ ++ +W +I G + I +M + K
Sbjct: 247 ALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKP 306
Query: 240 ---TWNSII-----SVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIK 290
T SII SV +R+G K H Y+ + +I ++I YF+ G V SA
Sbjct: 307 TLMTLTSIIYASSRSVQLRHG--KFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAET 364
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+F ++ +V WNVMI G + L + MKE PD TF+S L+ CS L
Sbjct: 365 IFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAA 424
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
LD GR++H I V A++ MYA+CG++ A F +P D++SW S+I
Sbjct: 425 LDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFA 484
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
HG A +AL LF+ M+ + + D +TF+ VLSACS+AGLVD+G YF+ M +Y ++P
Sbjct: 485 YGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKP 544
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
HY+C++DLLGR G + EA +L R+ + L AC +HNN +G G
Sbjct: 545 GIEHYSCLIDLLGRAGRLHEAYEILQ--RSKETRSDIGLLSTLFSACLLHNNFVLGIQIG 602
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVF 590
+ ++E++P++ Y++L+ MY S + ++ +++ +MKE G+KK PGCSWI+IN H F
Sbjct: 603 KMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPF 662
Query: 591 LSGDSSHPKFHRLRYLLNLLHTEIER 616
+ D S+P + LN+L +E+
Sbjct: 663 FAEDKSNPLADGVYECLNILGCHMEK 688
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 170/374 (45%), Gaps = 30/374 (8%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGLM 63
+A LFD+ PQRD WN +I YFK+G + A+ F++M E + T+ V++
Sbjct: 159 DAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCT 218
Query: 64 QSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+ N++ KEV + R D ++++ Y G ++ A VF +P K+ ++WN
Sbjct: 219 RLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNA 278
Query: 120 VI------GALVNCQRMDLAESYFKEMGARDVASWTIMVNG-----LVREGRIVEARKLF 168
+I G +C ++L E + + T ++ +R G+ + L
Sbjct: 279 MITGYSLKGDSRSC--IELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILR 336
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+++ D+ +I Y G V AE +F+ + ++ SW +I+G V A+
Sbjct: 337 NRIDV-DIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALH 395
Query: 229 YFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEKYPY-SNIASWTNVIVGYF 280
+ M E K T++S +S + + +E H + + +N ++ Y
Sbjct: 396 IYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYA 455
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G+V A K+F + RD+ W MIF G + E L+ F +M++ D+ TF +
Sbjct: 456 KCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLA 515
Query: 341 VLTICSDLPTLDLG 354
VL+ CS +D G
Sbjct: 516 VLSACSHAGLVDEG 529
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 138/314 (43%), Gaps = 56/314 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------------- 50
++ A+ +F+K+P+++ +TWN MI GY G + + L +M +
Sbjct: 258 LEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYA 317
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
D+F ++I + V A+ +F + +VV+W
Sbjct: 318 SSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSW 377
Query: 87 NSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
N MISG+V G +AL ++ M D ++++ + A +D +
Sbjct: 378 NVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIIN 437
Query: 143 RDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+ + I++ L+ + G + EARKLF ++P +D+ +W MI Y +G A L
Sbjct: 438 HKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRL 497
Query: 199 F---QKMHDR-DLTSWKQLINGLVNSRRIDAAISYFKQMPETCE-----KTWNSIISVLI 249
F QK++ R D ++ +++ ++ +D YF +M + + ++ +I +L
Sbjct: 498 FDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLG 557
Query: 250 RNGLVKEAHSYLEK 263
R G + EA+ L++
Sbjct: 558 RAGRLHEAYEILQR 571
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 211/761 (27%), Positives = 348/761 (45%), Gaps = 151/761 (19%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYN 56
R +A +LFD +P+ TV WN +I G+ N +A+ + +M P+ D +T++
Sbjct: 49 RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFS 108
Query: 57 TVIAGLMQS------------------------------------------------DNV 68
+ + Q+ +N
Sbjct: 109 STLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNC 168
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGAL 124
+ VFD M R+VV WN+MIS YV + EA ++F M + VS+ V A+
Sbjct: 169 DLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAV 228
Query: 125 VNCQRMDLAESYFK---EMGARDVASWTIMVNGL---VREGRIVEARKLFDKMPAKDVQA 178
D A + ++G+ V + ++ + + G + AR++FD ++ +
Sbjct: 229 WRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEV 288
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRD------------LTSWKQL------------- 213
WN MI GY+ N C A DLF ++ + + LT+ QL
Sbjct: 289 WNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYI 348
Query: 214 -----------INGLV--NSR--RIDAAISYFKQMPETCEKTWNSIISVLIRNGL----- 253
+N ++ SR I + F M E TWN+++S ++NGL
Sbjct: 349 LKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGL 408
Query: 254 ---------------------------------VKEAHSYLEKYPYSNIASWTNVIVGYF 280
K+AH+YL ++ + +I Y
Sbjct: 409 MLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSYLIDMYA 468
Query: 281 EMGEVGSAIKVFELMTT--RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ G + +A ++FE + RD WN MI G +N L EEG F +M E P+ T
Sbjct: 469 KSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTL 528
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
S+L C+ + T+ LG+QIH AI+ N+ V A++ MY++ G I A F+
Sbjct: 529 ASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLE 588
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
+ +++ ++I HG E+AL LF M + KPD +TFV +LSACSYAGLVD+G
Sbjct: 589 KNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRI 648
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F M+ +Y +QP + HY CV D+LGR G + EA + + +G +WG+LLGACR
Sbjct: 649 FQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFG--IWGSLLGACR 706
Query: 519 IHNNIKVGEIAGERVMELEPNNS--GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
IH ++G++ +++E+E +S G +++L+ +Y + G ++ R+ +M++ G+ KE
Sbjct: 707 IHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEA 766
Query: 577 GCSWIQINDGGHV--FLSGDSSHPKFHRLRYLLNLLHTEIE 615
GCSW+++ GHV F+S D HP+ + +L L E++
Sbjct: 767 GCSWVEV--AGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMK 805
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 267/652 (40%), Gaps = 142/652 (21%)
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-----PLKD 113
++ L + + A +FD + V WN++I G++CN + +AL + M P D
Sbjct: 44 LSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFD 103
Query: 114 VVSW-----------NLVIGALVNCQRM-------------------------------- 130
++ +L +G ++C +
Sbjct: 104 SYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAY 163
Query: 131 -----DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM-------------- 171
DL F M R+V +W M++ V+ R++EA K+F M
Sbjct: 164 DFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVN 223
Query: 172 --PA----KDVQAWNLM---------------------IAGYLDNGCVGVAEDLFQKMHD 204
PA D N++ I Y + GCV A ++F +
Sbjct: 224 VFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLE 283
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI--------ISVLIRNGLVKE 256
R+ W +I G V + AI F Q+ E+ + + + IS L L ++
Sbjct: 284 RNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQ 343
Query: 257 AHSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
H+Y L+ + +IV Y G +G++ KVF M RDV WN M+ +N L
Sbjct: 344 LHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGL 403
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
+EGL M++ G D+ T T++L++ S+L + ++G+Q HA I+ QF + +
Sbjct: 404 DDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGI-QFEGMDSY 462
Query: 376 MITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
+I MYA+ G I +A L E +S D +WN++I G +G +E+ +F +M + +
Sbjct: 463 LIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVR 522
Query: 434 PDDITFVGVLSACSYAGLVDQGR----YYFDCMKNKYF---------------------- 467
P+ +T +L AC+ G + G+ + C N+
Sbjct: 523 PNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENV 582
Query: 468 ----LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR----I 519
L+ S YT ++ G+ G+ + A++L + + GI+ + A+L AC +
Sbjct: 583 FAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLV 642
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
+++ + + ER +++P+ Y + +M GR +A + E G
Sbjct: 643 DEGLRIFQ-SMEREYKIQPSAEH-YCCVADMLGRVGRVVEAYEFVKGLGEEG 692
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 196/697 (28%), Positives = 338/697 (48%), Gaps = 106/697 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFT 54
++ +++E + LF++MP RD V WN+M++ Y + GF + A+ L + P
Sbjct: 198 LKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLR 257
Query: 55 YNTVIAGLMQSDNVQGAKEVF----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
+ I+G D+ G + F D V ++++ N ++SGY+ G L+ F M
Sbjct: 258 LLSRISG---DDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMV 314
Query: 111 LKDV----VSW-----------NLVIGALVNC------------------------QRMD 131
D+ V++ +L +G V+C +++
Sbjct: 315 ESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIG 374
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF----------------------D 169
LA + F M RD+ SW ++ G+ + VEA LF
Sbjct: 375 LARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAAS 434
Query: 170 KMP-----AKDVQAWNL-------------MIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
+P +K + + +I Y N C+ AE LF + ++ DL +W
Sbjct: 435 SLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWN 493
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWN-SIISVLIRNGLV------KEAHSYLEKY 264
+++G S + F M + E++ + ++ +VL G + K+ H+Y K
Sbjct: 494 AMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKS 553
Query: 265 PYSNIASW--TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
Y ++ W + ++ Y + G++ +A F+ + D W +I G EN E L
Sbjct: 554 GY-DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHV 612
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F QM+ G PD T ++ S L L+ GRQIHA A+K+ V +++ MYA+
Sbjct: 613 FSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAK 672
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CG+I A F + + +I +WN+++ GLA HG ++AL+LF++M KPD +TF+GV
Sbjct: 673 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGV 732
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
LSACS++GLV + Y M Y ++P HY+C+ D LGR GL+ EA NL++ +
Sbjct: 733 LSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSM---S 789
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
+E S +++ LL ACR+ + + G+ +++ELEP +S Y++L+ MY + + ++ K
Sbjct: 790 MEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKL 849
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
MK + VKK+PG SWI++ + H+F+ D S+P+
Sbjct: 850 ARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQ 886
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 143/502 (28%), Positives = 225/502 (44%), Gaps = 98/502 (19%)
Query: 17 PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDN--VQGAKEV 74
P+R V N +I Y K G L A +F++MPERD+ ++N+++A QS V+ KE
Sbjct: 79 PERFLV--NNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEA 136
Query: 75 FDGMEV--RDVVTWNSMI----------SGYVCNGLIDEALRVFHGMPLKDVVSW-NLVI 121
F + +DVV + M SGYVC A FHG K + + V
Sbjct: 137 FLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVC------ASESFHGYACKIGLDGDDFVA 190
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
GALVN Y K G V+EGR+ LF++MP +DV WNL
Sbjct: 191 GALVNI--------YLK--------------FGKVKEGRV-----LFEEMPYRDVVLWNL 223
Query: 182 MIAGYLDNGCVGVAEDLFQKMHD------------------------------------- 204
M+ YL+ G A DL H
Sbjct: 224 MLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASA 283
Query: 205 -RDLTSWKQLINGLVNSRRIDAAISYFKQMPET---CEK-TWNSIISVLIR---NGLVKE 256
++ S ++++G +++ + A + F M E+ C++ T+ +++ +R L ++
Sbjct: 284 VSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQ 343
Query: 257 AHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
H K + + +N ++ Y ++ ++G A VF M+ RD+ WN +I G+ ++DL
Sbjct: 344 VHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDL 403
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT-LDLGRQIHAQAIKIARNQFTTVSN 374
E + F+Q+ G PD+ T TSVL S LP L L +QIH AIK + VS
Sbjct: 404 EVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVST 463
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
A+I Y+R ++ A + F D+++WN+++ G K LELF M +
Sbjct: 464 ALIDAYSRNRCMKEAEVLFGRNNF-DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERS 522
Query: 435 DDITFVGVLSACSYAGLVDQGR 456
DD T VL C + ++QG+
Sbjct: 523 DDFTLATVLKTCGFLFAINQGK 544
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
L LG+ HA+ + + N + N +I+MY++CG++ A F +P D++SWNSI+
Sbjct: 62 LMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAA 121
Query: 411 LAY--HGYAE---KALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
A G E +A LF +R +T +L C ++G V
Sbjct: 122 YAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 168
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 196/659 (29%), Positives = 328/659 (49%), Gaps = 83/659 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNG-FLDNAMCL------------FNQMP------- 48
+ F + +++ +WN M+ Y + G + D+ C+ F P
Sbjct: 102 SSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACL 161
Query: 49 -----------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMIS 91
E D++ ++I + V+ A +VF M VRDV +WN+MIS
Sbjct: 162 SLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMIS 221
Query: 92 GYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMD------LAESYFKEMGAR- 143
G+ NG + EALRV M ++V + + +++ C + + L Y + G
Sbjct: 222 GFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLES 281
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM- 202
DV ++N + GR+ +A+++FD M +D+ +WN +IA Y N A F++M
Sbjct: 282 DVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEML 341
Query: 203 ---HDRDLTSWKQL--INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
DL + L I G ++ RRI A+ F E + ++I N LV
Sbjct: 342 FVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLE------VDIVIGNALVNM- 394
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
Y ++G + A VFE + +RDV WN +I G +N L
Sbjct: 395 ---------------------YAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLAS 433
Query: 318 EGLKFFVQMKESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
E + + M+E P+ T+ S+L S + L G +IH + IK V+ +
Sbjct: 434 EAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCL 493
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
I MY +CG ++ A+ F +P + WN+II L HG+ EKAL+LF+ MR K D
Sbjct: 494 IDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADH 553
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
ITFV +LSACS++GLVD+ ++ FD M+ +Y ++P HY C+VDL GR G +++A NL++
Sbjct: 554 ITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVS 613
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
+ I+ ++WG LL ACRIH N ++G A +R++E++ N G Y++L+ +Y + G+
Sbjct: 614 NM---PIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGK 670
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
E A ++ + ++ G++K PG S + + VF +G+ SHP+ + L +L+ +++
Sbjct: 671 WEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMK 729
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 219/499 (43%), Gaps = 78/499 (15%)
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQR----MDLAE 134
+ +DVV +++ Y G + + F + K++ SWN ++ A V R MD
Sbjct: 79 KAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVT 138
Query: 135 SYFKEMGAR---------------------------------DVASWTIMVNGLVREGRI 161
G R DV +++ R G +
Sbjct: 139 ELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAV 198
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
A K+F MP +DV +WN MI+G+ NG V A + +M ++
Sbjct: 199 EVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEV-------------- 244
Query: 222 RIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YF 280
++D M C ++ + + VL+ H Y+ K+ + +N ++ Y
Sbjct: 245 KMDTVT--VSSMLPICAQSNDVVGGVLV--------HLYVIKHGLESDVFVSNALINMYS 294
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G + A +VF+ M RD+ WN +I +ND L FF +M G PD T S
Sbjct: 295 KFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVS 354
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTV-SNAMITMYARCGNIQSALLEFSSVPIH 399
+ +I L +GR +H ++ + V NA++ MYA+ G+I A F +P
Sbjct: 355 LASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSR 414
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRL-TDFKPDDITFVGVLSACSYAGLVDQG-RY 457
D+ISWN++I G A +G A +A++ + M P+ T+V +L A S+ G + QG +
Sbjct: 415 DVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKI 474
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ +KN FL A TC++D+ G+ G +++AM+L EI + + W A++ +
Sbjct: 475 HGRLIKNCLFLDVFVA--TCLIDMYGKCGRLEDAMSLFYEIPQE----TSVPWNAIISSL 528
Query: 518 RIHNNIKVGEIAGERVMEL 536
IH + GE+ ++L
Sbjct: 529 GIHGH-------GEKALQL 540
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 213/472 (45%), Gaps = 32/472 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
R ++ A +F MP RD +WN MI G+ +NG + A+ + ++M + D T ++
Sbjct: 194 RFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSS 253
Query: 58 VIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++ QS++V G V G+E DV N++I+ Y G + +A RVF GM ++
Sbjct: 254 MLPICAQSNDVVGGVLVHLYVIKHGLE-SDVFVSNALINMYSKFGRLQDAQRVFDGMEVR 312
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEM---GAR----DVASWTIMVNGLV--REGRIVE 163
D+VSWN +I A A +FKEM G R V S + L R GR V
Sbjct: 313 DLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVH 372
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
+ + D+ N ++ Y G + A +F+++ RD+ SW LI G +
Sbjct: 373 GFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLA 432
Query: 224 DAAISYFKQMPE-----TCEKTWNSIISVLIRNGLVKEA---HSYLEKYP-YSNIASWTN 274
AI + M E + TW SI+ G +++ H L K + ++ T
Sbjct: 433 SEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATC 492
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+I Y + G + A+ +F + WN +I LG + GE+ L+ F M+ G D
Sbjct: 493 LIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKAD 552
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEF 393
+ TF S+L+ CS +D + K R + M+ ++ R G ++ A
Sbjct: 553 HITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLV 612
Query: 394 SSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
S++PI D W +++ HG AE L F RL + +++ + +LS
Sbjct: 613 SNMPIQADASIWGTLLAACRIHGNAE--LGTFASDRLLEVDSENVGYYVLLS 662
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 113/265 (42%), Gaps = 42/265 (15%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F V C+++ ++ +Q+HA + + + Q + ++T+YA G++ + F +
Sbjct: 54 FNLVFRSCTNI---NVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 398 IHDIISWNSIICGLAYHGYAEKALE-LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+I SWNS++ G +++ + E + L+ +PD TF VL AC L D +
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC--LSLADGEK 168
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID--------------------------- 489
+ C K + ++ L RFG ++
Sbjct: 169 MH--CWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQN 226
Query: 490 ----EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL 545
EA+ +L+ ++ + +++ ++L C N++ G + V++ S V++
Sbjct: 227 GNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIK-HGLESDVFV 285
Query: 546 --ILTEMYLSCGRREDAKRIFAQMK 568
L MY GR +DA+R+F M+
Sbjct: 286 SNALINMYSKFGRLQDAQRVFDGME 310
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 179/545 (32%), Positives = 288/545 (52%), Gaps = 34/545 (6%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWNLVIGALVNCQRMDLAESYFKE 139
D N++I Y G I A +VF +P + V WN ++ + A+ F
Sbjct: 129 DAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDV 188
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
M R+V +WT MV G + + AR+ FD MP + V +WN M++GY NG LF
Sbjct: 189 MPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLF 248
Query: 200 QKMHDR----DLTSWKQLINGLVNSRRIDAAIS-------YFKQMPETCEKTWNSIISVL 248
+M + D T+W +I+ S R D ++ + KQ+ C +++ +
Sbjct: 249 DEMVNAGIEPDETTWVTVISAC--SSRGDPCLAASLVRTLHQKQIQLNC-FVRTALLDMY 305
Query: 249 IRNGLVKEAHSYLEKY-PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
+ G + A ++ Y N +W +I Y +G + SA ++F M R+V WN MI
Sbjct: 306 AKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMI 365
Query: 308 FGLGENDLGEEGLKFFVQMKESGP-SPDNATFTSVLTICSDLPTLDLG----RQIHAQAI 362
G +N ++ F +M + +PD T SV++ C L L+LG R + I
Sbjct: 366 AGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQI 425
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
K++ + NAMI MY+RCG+++ A F + D++S+N++I G A HG+ +A+
Sbjct: 426 KLS----ISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAIN 481
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
L M+ +PD +TF+GVL+ACS+AGL+++GR F+ +K+ P HY C+VDLL
Sbjct: 482 LMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLL 536
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
GR G +++A + + +E V+G+LL A RIH +++GE+A ++ ELEP+NSG
Sbjct: 537 GRVGELEDAKRTMERM---PMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSG 593
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHR 602
+++L+ +Y S GR +D +RI MK+ GVKK G SW++ H F+ D SH +
Sbjct: 594 NFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDD 653
Query: 603 LRYLL 607
+ LL
Sbjct: 654 IYQLL 658
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 203/420 (48%), Gaps = 30/420 (7%)
Query: 2 RNARIQEAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVI 59
R I A+ +FD++P +R WN M+ GY+K A LF+ MPER++ T+ ++
Sbjct: 142 RLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMV 201
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVV 115
G + +++ A+ FD M R VV+WN+M+SGY NGL +E LR+F M D
Sbjct: 202 TGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDET 261
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVEARKLFDKM 171
+W VI A + LA S + + + + T +++ + G I AR++FD++
Sbjct: 262 TWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDEL 321
Query: 172 PA-KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
A ++ WN MI+ Y G + A +LF M R++ +W +I G + + AI F
Sbjct: 322 GAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELF 381
Query: 231 KQM-------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN-----IASWTNVIVG 278
K+M P+ E T S+IS G + E +++ ++ N I+ +I
Sbjct: 382 KEMITAKKLTPD--EVTMVSVISACGHLGAL-ELGNWVVRFLTENQIKLSISGHNAMIFM 438
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y G + A +VF+ M TRDV +N +I G + G E + MKE G PD TF
Sbjct: 439 YSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTF 498
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
VLT CS L+ GR++ A + + M+ + R G ++ A +P+
Sbjct: 499 IGVLTACSHAGLLEEGRKVFESIKDPAIDHYA----CMVDLLGRVGELEDAKRTMERMPM 554
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 23/252 (9%)
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F M+ G PD + ++ + G HA +K+ V NA+I MYA
Sbjct: 87 MFEHMQGCGVRPDAFVYPILIKSAGNG-----GIGFHAHVLKLGHGSDAFVRNAVIDMYA 141
Query: 382 RCGNIQSALLEFSSVPIHD--IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
R G I A F +P ++ + WN+++ G +A LF+ M + + IT+
Sbjct: 142 RLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMP----ERNVITW 197
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+++ + ++ R YFDCM + + + ++ + GL +E + L +E+
Sbjct: 198 TAMVTGYAKVKDLEAARRYFDCMPERSVVS-----WNAMLSGYAQNGLAEEVLRLFDEMV 252
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN----NSGVYLILTEMYLSCG 555
GIE T W ++ AC + +A V L N V L +MY CG
Sbjct: 253 NAGIEPDETTWVTVISACSSRGDPC---LAASLVRTLHQKQIQLNCFVRTALLDMYAKCG 309
Query: 556 RREDAKRIFAQM 567
A+RIF ++
Sbjct: 310 SIGAARRIFDEL 321
>gi|255574891|ref|XP_002528352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532220|gb|EEF34024.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 324
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 139/253 (54%), Positives = 186/253 (73%), Gaps = 11/253 (4%)
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+++V SWNLVIG L+N Q++DLA+ F++M RD+ SWTIMV+G R GRI EAR+ F++
Sbjct: 1 MRNVFSWNLVIGGLLNGQQVDLAKEVFRQMSDRDIVSWTIMVSGFARVGRITEAREFFEE 60
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
MP KDV+AWN ++ GY++N +AE LFQ + +RD SWK INGL+ +R++ A+ YF
Sbjct: 61 MPVKDVRAWNALMVGYMENQQADMAEVLFQTLPERDSDSWKHFINGLLCCQRVNDAVRYF 120
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
MP+ C+K WN ++ LIR+G V+ AH +LEK P+ ++ SWTNV+VGYF +GEVGS
Sbjct: 121 IVMPQKCKKPWNLVLLGLIRSGHVEAAHGFLEKLPHHDVVSWTNVLVGYFGLGEVGS--- 177
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
D TVWNV+I GLGEN+ GEEGLKFFV++K+ GPSPD ATFTS+L ICS+LP
Sbjct: 178 --------DATVWNVIICGLGENNHGEEGLKFFVRIKDLGPSPDAATFTSILIICSNLPA 229
Query: 351 LDLGRQIHAQAIK 363
LG QIHA+ IK
Sbjct: 230 SHLGGQIHAEMIK 242
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 178/366 (48%), Gaps = 53/366 (14%)
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
R++ SW +I GL+N +++D A F+QM + +W ++S R G + EA + E+
Sbjct: 2 RNVFSWNLVIGGLLNGQQVDLAKEVFRQMSDRDIVSWTIMVSGFARVGRITEAREFFEEM 61
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
P ++ +W ++VGY E + A +F+ + RD W I GL + +++F+
Sbjct: 62 PVKDVRAWNALMVGYMENQQADMAEVLFQTLPERDSDSWKHFINGLLCCQRVNDAVRYFI 121
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI-----KIARNQFTTVSNAMITM 379
M + P N L L L R H +A K+ + + +N ++
Sbjct: 122 VMPQKCKKPWN------------LVLLGLIRSGHVEAAHGFLEKLPHHDVVSWTNVLVG- 168
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y G + S D WN IICGL + + E+ L+ F R++ PD TF
Sbjct: 169 YFGLGEVGS-----------DATVWNVIICGLGENNHGEEGLKFFVRIKDLGPSPDAATF 217
Query: 440 VGVLSACS-----YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
+L CS + G C + ++ +P HY C++DLL RFGLIDEAM
Sbjct: 218 TSILIICSNLPASHLGGQIHAEMIKTCFDHDWWTKPTDEHYACLIDLLRRFGLIDEAMTF 277
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
LN++RADGIEV +VWGALLGACRIH NI +GEIA EMYLS
Sbjct: 278 LNQMRADGIEVPISVWGALLGACRIHKNIALGEIA-------------------EMYLSV 318
Query: 555 GRREDA 560
GRR DA
Sbjct: 319 GRRTDA 324
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 148/320 (46%), Gaps = 27/320 (8%)
Query: 50 RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
R++F++N VI GL+ V AKEVF M RD+V+W M+SG+ G I EA F M
Sbjct: 2 RNVFSWNLVIGGLLNGQQVDLAKEVFRQMSDRDIVSWTIMVSGFARVGRITEAREFFEEM 61
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
P+KDV +WN ++ + Q+ D+AE F+ + RD SW +NGL+ R+ +A + F
Sbjct: 62 PVKDVRAWNALMVGYMENQQADMAEVLFQTLPERDSDSWKHFINGLLCCQRVNDAVRYFI 121
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
MP K + WNL++ G + +G V A +K+ D+ SW ++ G Y
Sbjct: 122 VMPQKCKKPWNLVLLGLIRSGHVEAAHGFLEKLPHHDVVSWTNVLVG------------Y 169
Query: 230 FKQMPETCEKT-WNSIISVLIRNGLVKEAHSYLEKY----PYSNIASWTNVIV--GYFEM 282
F + T WN II L N +E + + P + A++T++++
Sbjct: 170 FGLGEVGSDATVWNVIICGLGENNHGEEGLKFFVRIKDLGPSPDAATFTSILIICSNLPA 229
Query: 283 GEVGSAIKVFELMTTRDVTVWN--------VMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+G I + T D W +I L L +E + F QM+ G
Sbjct: 230 SHLGGQIHAEMIKTCFDHDWWTKPTDEHYACLIDLLRRFGLIDEAMTFLNQMRADGIEVP 289
Query: 335 NATFTSVLTICSDLPTLDLG 354
+ + ++L C + LG
Sbjct: 290 ISVWGALLGACRIHKNIALG 309
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 117/233 (50%), Gaps = 15/233 (6%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM 78
R+ +WN++I G +D A +F QM +RD+ ++ +++G + + A+E F+ M
Sbjct: 2 RNVFSWNLVIGGLLNGQQVDLAKEVFRQMSDRDIVSWTIMVSGFARVGRITEAREFFEEM 61
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFK 138
V+DV WN+++ GY+ N D A +F +P +D SW I L+ CQR++ A YF
Sbjct: 62 PVKDVRAWNALMVGYMENQQADMAEVLFQTLPERDSDSWKHFINGLLCCQRVNDAVRYFI 121
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
M + W +++ GL+R G + A +K+P DV +W ++ GY G VG
Sbjct: 122 VMPQKCKKPWNLVLLGLIRSGHVEAAHGFLEKLPHHDVVSWTNVLVGYFGLGEVG----- 176
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM----PETCEKTWNSIISV 247
D T W +I GL + + + +F ++ P T+ SI+ +
Sbjct: 177 ------SDATVWNVIICGLGENNHGEEGLKFFVRIKDLGPSPDAATFTSILII 223
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 127/277 (45%), Gaps = 25/277 (9%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+ ++ A+ +F +M RD V+W +M+ G+ + G + A F +MP +D+ +N ++
Sbjct: 15 LNGQQVDLAKEVFRQMSDRDIVSWTIMVSGFARVGRITEAREFFEEMPVKDVRAWNALMV 74
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G M++ A+ +F + RD +W I+G +C +++A+R F MP K WNLV
Sbjct: 75 GYMENQQADMAEVLFQTLPERDSDSWKHFINGLLCCQRVNDAVRYFIVMPQKCKKPWNLV 134
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ L+ ++ A + +++ DV SWT ++ G G + D WN
Sbjct: 135 LLGLIRSGHVEAAHGFLEKLPHHDVVSWTNVLVGYFGLGEV-----------GSDATVWN 183
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHD----RDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
++I G +N F ++ D D ++ ++ N +M +T
Sbjct: 184 VIICGLGENNHGEEGLKFFVRIKDLGPSPDAATFTSILIICSNLPASHLGGQIHAEMIKT 243
Query: 237 C----------EKTWNSIISVLIRNGLVKEAHSYLEK 263
C ++ + +I +L R GL+ EA ++L +
Sbjct: 244 CFDHDWWTKPTDEHYACLIDLLRRFGLIDEAMTFLNQ 280
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 190/629 (30%), Positives = 327/629 (51%), Gaps = 38/629 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYN 56
+++ I +A+ +FD +++ V WN M+ G+ +N + + +F M D+ FT+
Sbjct: 373 VKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFV 432
Query: 57 TVIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+V+ + D++ ++V + M+ D+ N+M+ Y G ID A +F +P
Sbjct: 433 SVLGACINLDSLDIGRQVHCITIKNSMDA-DLFVANAMLDMYSKLGAIDVAKALFSLIPG 491
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMG----ARDVASWTIMVNGL-----VREGRIV 162
KD VSWN +I L + + + A K M A D S+ +N G+ +
Sbjct: 492 KDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQI 551
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ + + +L I Y G V + + + + LI GLV + R
Sbjct: 552 HCASIKYNVCSNHAVGSSL-IDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNR 610
Query: 223 IDAAISYFKQMPETCEK----TWNSIISVL---IRNGLVKEAHSYLEKYPYSNIASWTNV 275
D AI F+Q+ + K T+ SI+S + + + K+ HSY K N + +
Sbjct: 611 EDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGI 670
Query: 276 -IVG-YFEMGEVGSAIKVF-ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+VG Y + + A K+ E+ +++ W I G +N ++ L F +M+
Sbjct: 671 SLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVR 730
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
D ATF SVL CS++ L G++IH IK + T ++A++ MY++CG++ S+
Sbjct: 731 SDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEI 790
Query: 393 FSSVP-IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F + +I+ WNS+I G A +GYA +AL LF++M+ + KPD++T +GVL ACS+AGL
Sbjct: 791 FKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGL 850
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI--RADGIEVSPTV 509
+ +GR FD M Y + PR HY C++DLLGR G + EA +++++ RADG+ +
Sbjct: 851 ISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGV-----I 905
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
W L AC++H + + G++A ++++E+EP S Y+ L+ ++ + G +AK M+E
Sbjct: 906 WATFLAACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMRE 965
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
GV K PGCSWI + + ++F+ D+ HP
Sbjct: 966 KGVMKFPGCSWITVGNKTNLFVVQDTHHP 994
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 146/577 (25%), Positives = 262/577 (45%), Gaps = 106/577 (18%)
Query: 32 FKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMIS 91
K+GF +A C Q DM+ + V+ A+ VFDG+ D + W SMI+
Sbjct: 187 LKSGFCSSAFC---QAGLVDMYA---------KCVEVKDARRVFDGIACPDTICWASMIA 234
Query: 92 GYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG-ARDVASWTI 150
GY G +AL +F S ++MG A D ++
Sbjct: 235 GYHRVGRYQQALALF----------------------------SRMEKMGSAPDQVTYVT 266
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
+++ L GR+ +AR L ++ AWN +I+ Y +G L++ M + L
Sbjct: 267 IISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPT 326
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
+ ++++ A+++ F + I + +++GL +N+
Sbjct: 327 RSTFASMLSAA---ASMTAFDE--------GQQIHAAAVKHGL------------DANVF 363
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
+++I Y + G + A KVF+ T +++ +WN M++G +NDL EE ++ F M+ +
Sbjct: 364 VGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRAD 423
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
D+ TF SVL C +L +LD+GRQ+H IK + + V+NAM+ MY++ G I A
Sbjct: 424 LEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAK 483
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
FS +P D +SWN++I GLA++ E+A+ + +RM+ PD+++F ++ACS
Sbjct: 484 ALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIR 543
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI---------------------- 488
+ G+ C KY + A + ++DL +FG +
Sbjct: 544 ATETGK-QIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALI 602
Query: 489 ---------DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME---- 535
DEA+ L ++ DG + S + ++L C V + G++V
Sbjct: 603 TGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGC----TGPVSSVIGKQVHSYTLK 658
Query: 536 --LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
L ++ + + L +YL C EDA ++ A++ ++
Sbjct: 659 SALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDH 695
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 136/586 (23%), Positives = 261/586 (44%), Gaps = 93/586 (15%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAG 61
+++A+ +FD + DT+ W MI GY + G A+ LF++M + D TY T+I+
Sbjct: 211 VKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIIST 270
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
L + A+ + +++ V WN++IS Y +GL E ++ M + ++
Sbjct: 271 LASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTF 330
Query: 122 GALVNCQRMDLAESYFKEMGARDVAS--------WTIMVNGLVREGRIVEARKLFDKMPA 173
++++ A +++ A V + ++N V+ G I +A+K+FD
Sbjct: 331 ASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTE 390
Query: 174 KDVQAWNLMIAGYLDN------------------------------GCVGV-AEDLFQKM 202
K++ WN M+ G++ N C+ + + D+ +++
Sbjct: 391 KNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQV 450
Query: 203 H--------DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
H D DL +++ ID A + F +P +WN++I L N
Sbjct: 451 HCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEE 510
Query: 255 KEA--------------------------------------HSYLEKYPY-SNIASWTNV 275
+EA H KY SN A +++
Sbjct: 511 EEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSL 570
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
I Y + G+V S+ KV + + N +I GL +N+ +E ++ F Q+ + G P N
Sbjct: 571 IDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSN 630
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIA-RNQFTTVSNAMITMYARCGNIQSALLEFS 394
TF S+L+ C+ + +G+Q+H+ +K A NQ T++ +++ +Y +C ++ A +
Sbjct: 631 FTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLA 690
Query: 395 SVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
VP H +++ W + I G A +GY++++L +F RMR D + D+ TF VL ACS +
Sbjct: 691 EVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALT 750
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
G+ + F+ +A + ++D+ + G + + + E++
Sbjct: 751 DGKEIHGLIIKSGFVSYETA-ASALMDMYSKCGDVISSFEIFKELK 795
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 6/236 (2%)
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G +PD VL+ CS L L+ GRQ+H +K ++ MYA+C ++ A
Sbjct: 155 GGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDA 214
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F + D I W S+I G G ++AL LF RM PD +T+V ++S +
Sbjct: 215 RRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASM 274
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
G + R K P + + V+ + GL E L +++ G+ + +
Sbjct: 275 GRLSDARTLL-----KRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRST 329
Query: 510 WGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ ++L A G +I V N V L +Y+ G DAK++F
Sbjct: 330 FASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVF 385
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 183/598 (30%), Positives = 318/598 (53%), Gaps = 54/598 (9%)
Query: 33 KNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISG 92
K G+L+ +C+ ++ DMF S ++ A +VFD M R++VTW MI+
Sbjct: 156 KTGYLEADVCVGCELI--DMFVKG--------SGDLGSAYKVFDKMPERNLVTWTLMITR 205
Query: 93 YVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAE---SYFKEMG-ARD 144
+ G +A+ +F M L D +++ V+ A + L + S +G A D
Sbjct: 206 FAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALD 265
Query: 145 VASWTIMVNGLVR---EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG-CVGVAEDLFQ 200
V +V+ + +G + ++RK+F++MP +V +W +I Y+ +G C A +LF
Sbjct: 266 VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFC 325
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
KM I+G + F + + C + ++ +SY
Sbjct: 326 KM-----------ISGHIRPNHFS-----FSSVLKACGNLSDPYTG--------EQVYSY 361
Query: 261 LEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
K +++ N ++ Y G + A K F+++ +++ +N ++ G +N EE
Sbjct: 362 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 421
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
F ++ ++G TF S+L+ + + + G QIH + +K + NA+I+M
Sbjct: 422 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 481
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y+RCGNI++A F+ + ++ISW S+I G A HG+A +ALE+F +M T KP++IT+
Sbjct: 482 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 541
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE-- 497
V VLSACS+ G++ +G+ +F+ M ++ + PR HY C+VDLLGR GL+ EAM +N
Sbjct: 542 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 601
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
+ AD + VW LLGACR+H N ++G A E ++E EP++ Y++L+ ++ S G+
Sbjct: 602 LMADAL-----VWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQW 656
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+D +I MKE + KE GCSWI++ + H F G++SHP+ ++ L+ L ++I+
Sbjct: 657 KDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 714
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 133/527 (25%), Positives = 240/527 (45%), Gaps = 65/527 (12%)
Query: 4 ARIQEAQNLFDKMPQR----DTVTWNVMIRG--YFKNGFLDNAMC--LFNQMPERDMFTY 55
R+ A + D M Q+ D T++++++ F+N L + L E D
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 56 NTVIAGLMQSDNVQGAKEVFDGM-EVRDVVTWNSMISGYVCNGLIDEALRVFHGMP---- 110
NT+I+ + + + A+ +F+GM RD+V+W++M+S + N + +A+ F M
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124
Query: 111 LKDVVSWNLVIGALVNCQRMDLAE---SYFKEMG--ARDVASWTIMVNGLVR-EGRIVEA 164
+ + VI A N + E + + G DV +++ V+ G + A
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
K+FDKMP +++ W LMI + GC A DLF M ++G V R
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDME----------LSGYVPDRF-- 232
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYS-NIASWTNVIVGYF 280
T++S++S GL+ K+ HS + + + ++ +++ Y
Sbjct: 233 ---------------TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYA 277
Query: 281 EM---GEVGSAIKVFELMTTRDVTVWNVMIFGL---GENDLGEEGLKFFVQMKESGPSPD 334
+ G V + KVFE M +V W +I GE D +E ++ F +M P+
Sbjct: 278 KCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECD--KEAIELFCKMISGHIRPN 335
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ +F+SVL C +L G Q+++ A+K+ V N++I+MYAR G ++ A F
Sbjct: 336 HFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFD 395
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+ +++S+N+I+ G A + +E+A LF + T TF +LS + G + +
Sbjct: 396 ILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGK 455
Query: 455 G-RYYFDCMKNKYFLQPRSAHYTC--VVDLLGRFGLIDEAMNLLNEI 498
G + + +K Y +S C ++ + R G I+ A + NE+
Sbjct: 456 GEQIHGRLLKGGY----KSNQCICNALISMYSRCGNIEAAFQVFNEM 498
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 105/233 (45%), Gaps = 49/233 (21%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
R+ R+++A+ FD + +++ V++N ++ GY KN + A LFN++ + + FT+ +
Sbjct: 383 RSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFAS 442
Query: 58 VIAGLM-----------------------------------QSDNVQGAKEVFDGMEVRD 82
+++G + N++ A +VF+ ME R+
Sbjct: 443 LLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRN 502
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAESYFK 138
V++W SMI+G+ +G AL +FH M + +++ V+ A + + + +F
Sbjct: 503 VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFN 562
Query: 139 EMGARD-----VASWTIMVNGLVREGRIVEARKLFDKMP-AKDVQAWNLMIAG 185
M + + MV+ L R G +VEA + + MP D W ++
Sbjct: 563 SMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 615
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 158/361 (43%), Gaps = 32/361 (8%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDN-AMCLFNQMPERDM----FTYNT 57
+ + +++ +F++MP+ + ++W +I Y ++G D A+ LF +M + F++++
Sbjct: 282 DGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSS 341
Query: 58 VIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V+ + ++V+ G+ + V NS+IS Y +G +++A + F + K
Sbjct: 342 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVG-NSLISMYARSGRMEDARKAFDILFEK 400
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVEARKLF 168
++VS+N ++ + + A F E+ + ++ +++G G + + ++
Sbjct: 401 NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIH 460
Query: 169 DKMPAKDVQA----WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
++ ++ N +I+ Y G + A +F +M DR++ SW +I G
Sbjct: 461 GRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFAT 520
Query: 225 AAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEK-YPYSNIASWTNVIVGY 279
A+ F +M ET K T+ +++S G++ E + Y I
Sbjct: 521 RALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACM 580
Query: 280 FE-MGEVGSAIKVFELMTT----RDVTVWNVMIFGL---GENDLGEEGLKFFVQMKESGP 331
+ +G G ++ E + + D VW ++ G +LG + ++ + P
Sbjct: 581 VDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDP 640
Query: 332 S 332
+
Sbjct: 641 A 641
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 197/641 (30%), Positives = 314/641 (48%), Gaps = 45/641 (7%)
Query: 12 LFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PERDMFTYNTVIAGL 62
+FD +P RD +WN ++ ++ LD A+ F M P F A
Sbjct: 71 VFDDIPPAARDVASWNSLLNPLSRHRPLD-ALSRFRSMLSSSTVLPSPHSFAAAFTAAAR 129
Query: 63 MQSDNVQGAKEVFD---GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
S A V +V S+++ Y G++ +A R+F GMP ++ SW+
Sbjct: 130 AASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWST 189
Query: 120 VIG--ALVNCQ-------RMDLAE--SYFKEMGARDVASWTIMVNGLVR----EGRIVEA 164
++ A C R+ L E S E A V S + GL+ G IV+
Sbjct: 190 MVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVK- 248
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
L D V N ++ Y GC+G A +F+ +R+ +W +I G + D
Sbjct: 249 DGLLDF-----VSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEAD 303
Query: 225 AAISYFKQMPET----CEKTWNSIISVLIRNGLV---KEAHSYLEKYPYS-NIASWTNVI 276
+A+S F QM E T+ +++ G + K+AH + K + I + ++
Sbjct: 304 SAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALV 363
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A + F+ + D+ +W M+ G +N EE L + +M + G P +
Sbjct: 364 DMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKS 423
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T S L C+ + L+ G+Q+H Q +K V +A+ TMY++CGN++ + F +
Sbjct: 424 TIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRI 483
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
P D+I+WNSII G + +G AL+LFE M++ PD+ITF+ +L ACS+ GLVD+G
Sbjct: 484 PDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGW 543
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
YF M Y L PR HY C+VD+L R G++ EA + + I I+ +W +LGA
Sbjct: 544 EYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESIT---IDHGTCLWRIVLGA 600
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
CR + VG AGER+MEL +S Y++L+ +Y S + D +R+ M+ GV K+P
Sbjct: 601 CRSLRDFDVGAYAGERLMELGTRDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDP 660
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
GCSW+++N HVF+ G+ HP+ + L L ++ E
Sbjct: 661 GCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMKDE 701
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 170/377 (45%), Gaps = 31/377 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVIA 60
+ +A+ +FD MPQR++ +W+ M+ GY + A LF M E+ F V++
Sbjct: 169 VSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLS 228
Query: 61 ------GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
GL+ + + G V DG+ + V NS+++ Y G + A VF ++
Sbjct: 229 AVSVPLGLLMGEQMHGLI-VKDGL-LDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNS 286
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIV-------EARKL 167
++W+ +I D A S F +M A G++ + +A L
Sbjct: 287 ITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGL 346
Query: 168 FDKMPAKDVQAW--NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
K+ +VQ + + ++ Y GC+ A++ F ++++ D+ W +++G V + +
Sbjct: 347 MVKL-GFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEE 405
Query: 226 AISYFKQMPETCEKTWNSIISVLIR--NGLV-----KEAHSYLEKYPYSNIASWTNVI-V 277
A++ + +M + S I+ +R G+ K+ H+ + KY A + +
Sbjct: 406 ALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALST 465
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + G + + VF + RDV WN +I G +N G L F +MK G PDN T
Sbjct: 466 MYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNIT 525
Query: 338 FTSVLTICSDLPTLDLG 354
F ++L CS + +D G
Sbjct: 526 FINILCACSHMGLVDRG 542
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+++ ++F ++P RD + WN +I G+ +NG + A+ LF +M D T+ ++
Sbjct: 473 LEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCA 532
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEA------LRVFHG 108
V E F M +T + Y C G++ EA + + HG
Sbjct: 533 CSHMGLVDRGWEYFSLMTKDYGLT--PRLDHYACMVDILSRAGMLKEAKDFIESITIDHG 590
Query: 109 MPLKDVVSWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVN 153
L W +V+GA + + D+ A E+G RD +++ ++ N
Sbjct: 591 TCL-----WRIVLGACRSLRDFDVGAYAGERLMELGTRDSSAYILLSN 633
>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
Length = 526
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 166/512 (32%), Positives = 279/512 (54%), Gaps = 30/512 (5%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI---GALVNCQRMDLAESYFKEMGAR 143
NS+I Y +DEA++VF +P +VSWN++I G +C + S +E G
Sbjct: 12 NSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFE 71
Query: 144 -DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
+ +++ ++ ++ + AR +FDK+ V WN +++GY +LF++M
Sbjct: 72 PNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRM 131
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLE 262
+++ + + +++S + + +Q+ ++ + L+ N +
Sbjct: 132 QHQNVQPDRTTLAVILSSCSKLGILDFGRQV-------HSASVRFLLHNDMF-------- 176
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+AS ++ Y + G++G A +F MT RDV WN +I GL + L +E F
Sbjct: 177 ------VAS--GLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDF 228
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F QM+E+G P +++ S++ CS L ++ GRQIHAQ +K +Q V +A+I MYA+
Sbjct: 229 FKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAK 288
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CGN+ A L F ++ + +I++WN +I G A +G +KA+ELFE M T+ KPD +TF+ V
Sbjct: 289 CGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAV 348
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
L+ CS++GLVD+ +F+ M+N Y + P + HYTC++D LGR G E L++++
Sbjct: 349 LTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKD 408
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
P +W LL AC +H+N ++G+ A E + ++P N Y++L+ +Y S GR DA
Sbjct: 409 ---DPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASA 465
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
+ A M GV K G SWI DG F+ D
Sbjct: 466 VRALMSNRGVVKGRGYSWIDQKDGVRAFMVAD 497
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 173/367 (47%), Gaps = 49/367 (13%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIA 60
+ EA +F+ +P V+WN++I G+ + G A+ + + M E + TY+ ++A
Sbjct: 23 EMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLA 82
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
+++ +V A+ +FD + V TWN+++SGY + + +F M ++V
Sbjct: 83 SCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTT 142
Query: 121 IGA-LVNCQRMDLAESYFKEMGARDVASWTI---------MVNGLV----REGRIVEARK 166
+ L +C ++ + + R V S ++ + +GLV + G+I AR
Sbjct: 143 LAVILSSCSKLGILDF------GRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARS 196
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+F+KM +DV WN +I+G + A D F++M + NG++ +
Sbjct: 197 IFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRE----------NGIMPTE----- 241
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEV 285
S + M +C + + I +G ++ H+ + K Y N+ + +I Y + G +
Sbjct: 242 -SSYASMINSCSRLSS------IPHG--RQIHAQVMKDGYDQNVYVGSALIDMYAKCGNM 292
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A F+ M +++ WN MI G +N LG++ ++ F M + PD TF +VLT C
Sbjct: 293 DDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGC 352
Query: 346 SDLPTLD 352
S +D
Sbjct: 353 SHSGLVD 359
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 132/316 (41%), Gaps = 56/316 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER--------- 50
+ A+ +FDK+ + TWN ++ GY + + + LF +M P+R
Sbjct: 90 VHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSS 149
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
DMF + ++ + + A+ +F+ M RDVV W
Sbjct: 150 CSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCW 209
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMD-------LAESYFK 138
NS+ISG + L EA F M ++ +++N C R+ + K
Sbjct: 210 NSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMK 269
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+ ++V + +++ + G + +AR FD M K++ AWN MI GY NG A +L
Sbjct: 270 DGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVEL 329
Query: 199 FQKM----HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-----CEKTWNSIISVLI 249
F+ M D ++ ++ G +S +D A+++F M + + + +I L
Sbjct: 330 FEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALG 389
Query: 250 RNGLVKEAHSYLEKYP 265
R G E + + K P
Sbjct: 390 RAGRFVEVEALIHKMP 405
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ +I A+++F+KM +RD V WN +I G + A F QM E + + A
Sbjct: 187 KCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYAS 246
Query: 62 LMQS---------------------------------------DNVQGAKEVFDGMEVRD 82
++ S N+ A+ FD M +++
Sbjct: 247 MINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKN 306
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAESYFK 138
+V WN MI GY NGL D+A+ +F M D V++ V+ + +D A ++F
Sbjct: 307 IVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFN 366
Query: 139 EM----GARDVAS-WTIMVNGLVREGRIVEARKLFDKMPAKDVQ-AWNLMIAGYL--DNG 190
M G +A +T +++ L R GR VE L KMP KD W +++A + N
Sbjct: 367 SMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNA 426
Query: 191 CVG--VAEDLFQ 200
+G AE LF+
Sbjct: 427 ELGKCAAEHLFR 438
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 6/202 (2%)
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
V N++I MY +C + A+ F S+P I+SWN +I G G KA+E+ M+
Sbjct: 10 VGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAG 69
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
F+P+++T+ +L++C A V R FD + +P + ++ + +
Sbjct: 70 FEPNEVTYSNLLASCIKARDVHSARAMFDKIS-----RPSVTTWNTLLSGYCQEEQHQDT 124
Query: 492 MNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEM 550
+ L ++ ++ T +L +C + G ++ V L N+ V L +M
Sbjct: 125 IELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDM 184
Query: 551 YLSCGRREDAKRIFAQMKENGV 572
Y CG+ A+ IF +M E V
Sbjct: 185 YSKCGQIGIARSIFNKMTERDV 206
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 192/631 (30%), Positives = 318/631 (50%), Gaps = 63/631 (9%)
Query: 16 MPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-RDM---------------FTYNTVI 59
+ Q + +++ G ++GF + + F + E RD+ F++N I
Sbjct: 19 ISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAI 78
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
G + S+N + A VV + ++ C+G D ++ L
Sbjct: 79 RGFLDSENPREA-----------VVLYKRVLQ---CDG------------TKPDNYTYPL 112
Query: 120 VIGALVNCQRMDLAESYFKEMGA-------RDVASWTIMVNGLVREGRIVEARKLFDKMP 172
+ A C R+ L + +G D+ +++ LV G + ARK+FDK
Sbjct: 113 LFKA---CARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSC 169
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS----RRIDAAIS 228
+D+ +WN MI GY+ G A + +++M + + + G+V+S +D
Sbjct: 170 VRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRE 229
Query: 229 YFKQMPETCEKTW----NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE 284
+ E K N+++ + ++ G ++ A + + SWT ++VGY + G
Sbjct: 230 SHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGL 289
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+ A K+F+ M +DV WN MI G + G+E L F +M+ +PD T S L+
Sbjct: 290 LDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSA 349
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
CS L LD+G IH K + + A+I MYA+CG I A+ F +P + ++W
Sbjct: 350 CSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTW 409
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
+II GLA HG A A+ F M PD++TF+G+LSAC + GLV++GR YF M +
Sbjct: 410 TAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSS 469
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
K+ L P+ HY+C+VDLLGR GL++EA L I++ IE VWGAL ACRIH N+
Sbjct: 470 KFNLSPKLKHYSCMVDLLGRAGLLEEAEEL---IKSMPIEADAVVWGALFFACRIHGNVL 526
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIN 584
+GE A ++++++P++SG+Y++L MY ++A + M++ GV+K PGCS I++N
Sbjct: 527 MGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVN 586
Query: 585 DGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+ F+ D SHP+ ++ L L ++E
Sbjct: 587 GIVYEFIVRDKSHPQSEQIYECLIQLTRQLE 617
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 178/415 (42%), Gaps = 95/415 (22%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PE------------- 49
A+ +FDK RD V+WN MI GY + G+ A+ + +M P+
Sbjct: 161 ARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQ 220
Query: 50 -------RDMFTY-------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
R+ Y N ++ M+ N++ A+++FD M + +V+W +M
Sbjct: 221 LEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTM 280
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM--------- 140
+ GY +GL+D A ++F MP KDVV WN +IG V+ R A + F EM
Sbjct: 281 VVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDE 340
Query: 141 -------------GARDVASW-----------------TIMVNGLVREGRIVEARKLFDK 170
GA DV W T +++ + G+I +A ++F +
Sbjct: 341 VTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQE 400
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAA 226
+P ++ W +I+G +G A F +M D D ++ L++ + ++
Sbjct: 401 LPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEG 460
Query: 227 ISYFKQMPETCE-----KTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNV----- 275
YF QM K ++ ++ +L R GL++EA ++ P ++ W +
Sbjct: 461 RKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACR 520
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
I G MGE +A K+ + M D ++ ++ GE ++ +E K M++ G
Sbjct: 521 IHGNVLMGE-RAASKLLQ-MDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRG 573
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 169/426 (39%), Gaps = 98/426 (23%)
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
QLIN ++ +IS KQ I S ++ GL+++ + + I+
Sbjct: 4 QLINPFLSLLEKCKSISQLKQ-----------IQSQMVLTGLIEDGFASSRLIAFCAISE 52
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTV--WNVMIFGLGENDLGEEGLKFFVQMKE- 328
W ++ + + I L TR+ WNV I G +++ E + + ++ +
Sbjct: 53 WRDL--------DYCTNI----LFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQC 100
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
G PDN T+ + C+ L + +G +I + + + VSNA+I + CG++
Sbjct: 101 DGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDG 160
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F + D++SWNS+I G G+A +AL + M++ KPD++T +GV+S+C+
Sbjct: 161 ARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQ 220
Query: 449 -----------------------------------AGLVDQGRYYFDCMKNKYFLQPRSA 473
G ++ R FD M NK +
Sbjct: 221 LEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVS---- 276
Query: 474 HYTCVVDLLGRFGLID-------------------------------EAMNLLNEIRADG 502
+T +V + GL+D EA+ L NE++A
Sbjct: 277 -WTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMN 335
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAK 561
I + L AC + VG + + E + N + L +MY CG+ A
Sbjct: 336 INPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAI 395
Query: 562 RIFAQM 567
++F ++
Sbjct: 396 QVFQEL 401
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 205/645 (31%), Positives = 331/645 (51%), Gaps = 52/645 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
+++A LFD+MP +TV++ + +G+ ++ A L ++ E + F + T++
Sbjct: 54 LEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKL 113
Query: 62 LMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
L+ D V + D ++I Y G +D A +VF G+ KD+VSW
Sbjct: 114 LVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSW 173
Query: 118 NLVIGALVNCQRMDLAESYFKE-----------MGAR----DVASWTIMVNGL--VREGR 160
+V C AE+Y E MG R +++ NGL + G+
Sbjct: 174 T----GMVAC----YAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGK 225
Query: 161 IVEARKL---FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL 217
V L +D+ D+ ++ Y +G + A+ F++M DL W +I+
Sbjct: 226 SVHGCALKVCYDR----DLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRY 281
Query: 218 VNSRRIDAAISYFKQMPETC-----EKTWNSIISV---LIRNGLVKEAHSYLEKYPY-SN 268
S + A+ F +M ++ T+ S++ L+ L + HS + K SN
Sbjct: 282 AQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSN 341
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ ++ Y + GE+ +++K+F T ++ WN +I G + GE+ L F M
Sbjct: 342 VFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLG 401
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
P T++SVL + L L+ GRQIH+ IK N+ + V+N++I MYA+CG I
Sbjct: 402 LDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDD 461
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A L F + D +SWN++ICG + HG +AL LF+ M+ ++ KP+ +TFVGVLSACS
Sbjct: 462 ARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSN 521
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
AGL+D+GR +F M Y ++P HYTC+V LLGR G DEA+ L+ EI + S
Sbjct: 522 AGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEI---PFQPSVM 578
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
VW ALLGAC IH N+ +G++ +RV+E+EP + +++L+ MY + R ++ + MK
Sbjct: 579 VWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMK 638
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
+ VKKEPG SW++ H F GD+SHP + +L L+ +
Sbjct: 639 KKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKK 683
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 209/480 (43%), Gaps = 68/480 (14%)
Query: 137 FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
K + D+ + I++N V G + +A KLFD+MP + ++ + G+
Sbjct: 30 LKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGF-------SRS 82
Query: 197 DLFQKMHDRDLTSWKQ--LINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
FQ+ L +++ +N V + + +S + +TC +SV
Sbjct: 83 HQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSM--DLADTC-------LSV------- 126
Query: 255 KEAHSYLEKYPYSNIA-SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
H+Y+ K + A T +I Y G V +A +VF+ + +D+ W M+ EN
Sbjct: 127 ---HAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAEN 183
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
E+ L F QM+ G P+N T ++ L C+ L +G+ +H A+K+ ++ V
Sbjct: 184 YCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVG 243
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD-F 432
A++ +Y + G I A F +P D+I W+ +I A +++ALELF RMR +
Sbjct: 244 IALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVV 303
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
P++ TF VL AC+ L++ G C+ K L ++D+ + G I+ ++
Sbjct: 304 VPNNFTFASVLQACASLVLLNLGNQIHSCVL-KVGLDSNVFVSNALMDVYAKCGEIENSV 362
Query: 493 NLL------NEIRADGIEVSPTVWGALLGACRIHNN-----IKVGEI-------AGERVM 534
L NE+ + I V G A + +N I+ E+ A ++
Sbjct: 363 KLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLV 422
Query: 535 ELEP--------------NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
LEP +S V L +MY CGR +DA+ F +M K+ SW
Sbjct: 423 ALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKM-----DKQDEVSW 477
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 160/363 (44%), Gaps = 64/363 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM-----FTYN 56
++ I EAQ F++MP+ D + W++MI Y ++ A+ LF +M + + FT+
Sbjct: 252 KSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFA 311
Query: 57 TVIA-------------------------------GLM----QSDNVQGAKEVFDGMEVR 81
+V+ LM + ++ + ++F G +
Sbjct: 312 SVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEK 371
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMD----LA 133
+ V WN++I GYV G ++AL +F M D+ V+++ V+ A + ++ +
Sbjct: 372 NEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIH 431
Query: 134 ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
K M +D +++ + GRI +AR FDKM +D +WN +I GY +G
Sbjct: 432 SLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGM 491
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLV----NSRRIDAAISYFKQM-----PETCEKTWNSI 244
A +LF M + K G++ N+ +D ++FK M E C + + +
Sbjct: 492 EALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCM 551
Query: 245 ISVLIRNGLVKEAHSYLEKYPYS-NIASW-----TNVIVGYFEMGEVGSAIKVFELMTTR 298
+ +L R+G EA + + P+ ++ W VI ++G+V A +V E+
Sbjct: 552 VWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKV-CAQRVLEMEPQD 610
Query: 299 DVT 301
D T
Sbjct: 611 DAT 613
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 108/252 (42%), Gaps = 6/252 (2%)
Query: 255 KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
K H ++ K+ S N+++ Y G + A K+F+ M + + + G +
Sbjct: 23 KSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRS 82
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
+ + +++ G + FT++L + + D +HA K+ V
Sbjct: 83 HQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVG 142
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
A+I Y+ CGN+ +A F + D++SW ++ A + E +L LF +MR+ ++
Sbjct: 143 TALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYR 202
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDC-MKNKYFLQPRSAHY-TCVVDLLGRFGLIDEA 491
P++ T L +C+ G+ C +K Y R + +++L + G I EA
Sbjct: 203 PNNFTISAALKSCNGLEAFKVGKSVHGCALKVCY---DRDLYVGIALLELYTKSGEIAEA 259
Query: 492 MNLLNEIRADGI 503
E+ D +
Sbjct: 260 QQFFEEMPKDDL 271
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 17/167 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ RI +A+ FDKM ++D V+WN +I GY +G A+ LF+ M + + T+
Sbjct: 455 KCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVG 514
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
V++ + + + F M ++D I Y C +G DEA+++ +P
Sbjct: 515 VLSACSNAGLLDKGRAHFKSM-LQD-YGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIP 572
Query: 111 LK-DVVSWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVN 153
+ V+ W ++GA V + +DL + + EM +D A+ ++ N
Sbjct: 573 FQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSN 619
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 201/674 (29%), Positives = 334/674 (49%), Gaps = 76/674 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM-FTYNTVIAGLMQ 64
+ A+ +FD +P RD V+WN MI + + ++ LF M ++ T T+++
Sbjct: 383 LTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHA 442
Query: 65 SDNVQGAKEVFDGMEVR-------DVVTW--NSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+V+G + G +V D+ T+ N++++ Y G +++A +F KD+V
Sbjct: 443 CSHVRGGVRL--GKQVHAYTLRNGDLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLV 500
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREG----RIVEARKLFDKM 171
SWN VI +L R + A Y + ++V+G+ +G ++ A +++
Sbjct: 501 SWNTVISSLSQNDRFEEALMYV----------YLMIVDGVRPDGVTLASVLPACSQLERL 550
Query: 172 P-AKDVQAWNLMIAGYLDNGCVGVA--------------EDLFQKMHDRDLTSWKQLING 216
+++ + L ++N VG A +F + R + W L+ G
Sbjct: 551 RIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAG 610
Query: 217 LVNSRRIDAAISYFKQMPETCE-----KTWNSIISVLIRNGLVKEA---HSYLEKYPYSN 268
+ D A+ F +M E T+ S++ +R + + H Y+ K +
Sbjct: 611 YARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGK 670
Query: 269 IASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL---GEND---------- 314
N ++ Y MG V + +F M RD+ WN MI G G D
Sbjct: 671 DKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQ 730
Query: 315 --LGEEGLKFFVQMKESGP---SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
GE+G FV ++ G P++ T +VL C+ L L G++IHA A+K
Sbjct: 731 RRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMD 790
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
V +A++ MYA+CG + A F +PI ++I+WN +I HG E+ALELF M
Sbjct: 791 VAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTA 850
Query: 430 TD------FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
+P+++T++ + +ACS++G+VD+G + F MK + ++PR HY C+VDLLG
Sbjct: 851 GGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLG 910
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGV 543
R G + EA L+N + ++ +V W +LLGACRIH +++ GEIA + + LEPN +
Sbjct: 911 RSGRVKEAYELINTMPSNLNKVD--AWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASH 968
Query: 544 YLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL 603
Y++++ +Y S G + A + +MKE GV+KEPGCSWI+ D H FLSGD+SHP+ L
Sbjct: 969 YVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKEL 1028
Query: 604 RYLLNLLHTEIERE 617
L L + +E
Sbjct: 1029 HEYLETLSQRMRKE 1042
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 194/468 (41%), Gaps = 77/468 (16%)
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
F P V N ++ Y G + A +F + DRD SW +I L + ++
Sbjct: 359 FGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSL 418
Query: 228 SYFKQM-PETCEKTWNSIISVL-----IRNG--LVKEAHSYLEKYPYSNIASWTN--VIV 277
F+ M E + T +++SV +R G L K+ H+Y + ++ ++TN ++
Sbjct: 419 HLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLR--NGDLRTYTNNALVT 476
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y +G V A +F + +D+ WN +I L +ND EE L + M G PD T
Sbjct: 477 MYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVT 536
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIK---IARNQFTTVSNAMITMYARCGNIQSALLEFS 394
SVL CS L L +GR+IH A++ + N F V A++ MY C + L F
Sbjct: 537 LASVLPACSQLERLRIGREIHCYALRNGDLIENSF--VGTALVDMYCNCKQPKKGRLVFD 594
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELF-ERMRLTDFKPDDITFVGVLSAC------- 446
V + WN+++ G A + + ++AL LF E + ++F P+ TF VL AC
Sbjct: 595 GVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFS 654
Query: 447 ----------------------------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
S G V+ + F M + + + C+
Sbjct: 655 DKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCI 714
Query: 479 VDLLGRFGLIDEAMNLLNEIRA----------------DGIEVSP---TVWGALLGACRI 519
V GR+ D+A+NLL+E++ G+ P T+ L G +
Sbjct: 715 V--CGRY---DDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAAL 769
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
K EI V + + V L +MY CG A R+F QM
Sbjct: 770 AALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQM 817
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 216/497 (43%), Gaps = 62/497 (12%)
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
V NS+++ Y G + A +VF +P +D VSWN +I L + +L+ F+ M +
Sbjct: 367 VAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLS 426
Query: 143 RDV--ASWTIM--------VNGLVREGRIVEARKLFDKMPAKDVQAW--NLMIAGYLDNG 190
+V S+T++ V G VR G+ V A L + D++ + N ++ Y G
Sbjct: 427 ENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRN----GDLRTYTNNALVTMYARLG 482
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSI 244
V A+ LF +DL SW +I+ L + R + A+ Y M P+ T S+
Sbjct: 483 RVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGV--TLASV 540
Query: 245 I---SVLIRNGLVKEAHSYLEKYP--YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+ S L R + +E H Y + N T ++ Y + VF+ + R
Sbjct: 541 LPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRT 600
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
V VWN ++ G N+ ++ L+ FV+M ES P+ TF SVL C IH
Sbjct: 601 VAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIH 660
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
+K + V NA++ MY+R G ++ + F + DI+SWN++I G G +
Sbjct: 661 GYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYD 720
Query: 419 KALELFERMRL------------------TDFKPDDITFVGVLSACSYAGLVDQGR-YYF 459
AL L M+ FKP+ +T + VL C+ + +G+ +
Sbjct: 721 DALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHA 780
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
+K K L A + +VD+ + G ++ A + +++ + W L+ A +
Sbjct: 781 YAVKQK--LAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNV----ITWNVLIMAYGM 834
Query: 520 HNNIKVGEIAGERVMEL 536
H GE +EL
Sbjct: 835 HGK-------GEEALEL 844
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 174/413 (42%), Gaps = 47/413 (11%)
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG-------LVKEA 257
R + W L+ +S AIS + M N +++ L K+
Sbjct: 293 RSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQI 352
Query: 258 HSYLEKY---PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
H+++ K+ P S++A +++ Y + G++ +A +VF+ + RD WN MI L +
Sbjct: 353 HAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFE 412
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL-PTLDLGRQIHAQAIKIARNQFTTVS 373
E L F M P + T SV CS + + LG+Q+HA ++ + T +
Sbjct: 413 EWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTN 471
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
NA++TMYAR G + A F D++SWN++I L+ + E+AL M + +
Sbjct: 472 NALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVR 531
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYF-------DCMKNKYF-----------LQPRS--- 472
PD +T VL ACS + GR D ++N + QP+
Sbjct: 532 PDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRL 591
Query: 473 ----------AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP--TVWGALLGACRIH 520
A + ++ R D+A+ L E+ ++ E P T + ++L AC
Sbjct: 592 VFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISES-EFCPNATTFASVLPACVRC 650
Query: 521 NNIKVGE-IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
E I G V + V L +MY GR E +K IF +M + +
Sbjct: 651 KVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDI 703
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 100/258 (38%), Gaps = 74/258 (28%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------DMF-- 53
R R++ ++ +F +M +RD V+WN MI G G D+A+ L ++M R D F
Sbjct: 684 RMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVD 743
Query: 54 --------------TYNTVIAGLMQSDNVQGAKE-------------------------- 73
T TV+ G + KE
Sbjct: 744 YEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAK 803
Query: 74 ---------VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL-----KDVVSWNL 119
VFD M +R+V+TWN +I Y +G +EAL +F M ++V+ N
Sbjct: 804 CGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNE 863
Query: 120 V--IGALVNCQR---MDLAESYFKEMGARDVAS-----WTIMVNGLVREGRIVEARKLFD 169
V I C +D F M A + +V+ L R GR+ EA +L +
Sbjct: 864 VTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELIN 923
Query: 170 KMPA--KDVQAWNLMIAG 185
MP+ V AW+ ++
Sbjct: 924 TMPSNLNKVDAWSSLLGA 941
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 205/682 (30%), Positives = 330/682 (48%), Gaps = 88/682 (12%)
Query: 8 EAQNLFDKM-PQRDTVTW-NVMIRGYFKNGFLDNAMCLFNQM------PER--------- 50
EA +L ++ P TV W N +IR K G LD+ + + QM P+
Sbjct: 77 EAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKA 136
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGM---EVRDV 83
++F N+++A + + A ++FD + ++ D+
Sbjct: 137 CGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDI 196
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
V+WNS+++ YV G ALR+ + + S L A+ + S F +
Sbjct: 197 VSWNSILAAYVQGGQSRTALRI--AFRMGNHYSLKLRPDAITLVNILPACASVFALQHGK 254
Query: 144 DVASWTIMVNGLVRE--------------GRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
V +++ NGLV + ++ EA K+F+ + KDV +WN M+ GY
Sbjct: 255 QVHGFSVR-NGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQI 313
Query: 190 GCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTW 241
G A LF+ M + D+ +W +I G A+ F+QM E T
Sbjct: 314 GSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTL 373
Query: 242 NSIISVLIRNGLV---KEAHSYLEKYPYS--------NIASWTNVIVGYFEMGEVGSAIK 290
S++S G + K+ H+Y+ K + ++ +I Y + A
Sbjct: 374 ASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARS 433
Query: 291 VFELMTTRD--VTVWNVMIFGLGENDLGEEGLKFFVQM--KESGPSPDNATFTSVLTICS 346
+F+ + +D V W VMI G ++ + LK F Q+ +++ P+ T + L C+
Sbjct: 434 IFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACA 493
Query: 347 DLPTLDLGRQIHAQAIKIA-RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
L L LGRQ+HA A++ ++ V N +I MY++ G+I +A F ++ + +++SW
Sbjct: 494 RLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWT 553
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNK 465
S++ G HG E+AL LF++M+ F D ITF+ VL ACS++G+VDQG YF M
Sbjct: 554 SLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKG 613
Query: 466 YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKV 525
+ + P + HY C+VDLLGR G ++EAM L+ + +E + VW ALL A RIH NI++
Sbjct: 614 FGITPGAEHYACMVDLLGRAGRLNEAMELIKNM---SMEPTAVVWVALLSASRIHANIEL 670
Query: 526 GEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
GE A ++ EL N G Y +L+ +Y + R +D RI + MK G++K PGCSWIQ
Sbjct: 671 GEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKK 730
Query: 586 GGHVFLSGDSSHPKFHRLRYLL 607
F GD SHP+ ++ LL
Sbjct: 731 STTTFFVGDRSHPESEQIYNLL 752
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 135/325 (41%), Gaps = 42/325 (12%)
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV--WNVMIFGLGE 312
K AH + + ++ + S+ + Y E G A+ + + + TV WN +I +
Sbjct: 47 KLAHQQIFVHGFTEMFSYA--VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVK 104
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
L ++ L F+ QM+ G PD+ TF VL C ++P+L G +HA +
Sbjct: 105 LGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFI 164
Query: 373 SNAMITMYARCGNIQSALLEFSSV---PIHDIISWNSIICGLAYHGYAEKALELFERM-- 427
N+++ MY RCG + A F V I DI+SWNSI+ G + AL + RM
Sbjct: 165 CNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGN 224
Query: 428 -RLTDFKPDDITFVGVLSACSYAGLVDQGR-----------------------YYFDCMK 463
+PD IT V +L AC+ + G+ Y C K
Sbjct: 225 HYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSK 284
Query: 464 ----NKYF---LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG- 515
NK F + + +V + G D A++L ++ + I++ W A++
Sbjct: 285 MNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAG 344
Query: 516 -ACRIHNNIKVGEIAGERVMELEPN 539
A + H + ++ LEPN
Sbjct: 345 YAQKGHGFEALDVFRQMQLYGLEPN 369
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 159/386 (41%), Gaps = 96/386 (24%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
+ +++ EA +F+ + ++D V+WN M+ GY + G D+A+ LF M E D+ T++
Sbjct: 281 KCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSA 340
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
VIAG Q + A +VF M++ +VVT S++SG G + + H +K+
Sbjct: 341 VIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQT-HAYVIKN 399
Query: 114 V--VSWN------LVIGALVN----CQRMDLAESYFKEMGARD--VASWTIMVNGLVREG 159
+ ++WN LV+ L++ C+ +A S F + +D V +WT+M+ G + G
Sbjct: 400 ILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHG 459
Query: 160 RIVEARKLFDKM-PAKDVQAWNLMIAGYLDNGCVGVAE-DLFQKMHDRDLTSWKQ----- 212
+A KLF ++ K N C + E L +++H L + +
Sbjct: 460 EANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLY 519
Query: 213 ----LINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
LI+ S IDAA + F M N
Sbjct: 520 VGNCLIDMYSKSGDIDAARAVFDNM-------------------------------KLRN 548
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ SWT+++ GY G + GEE L F QM++
Sbjct: 549 VVSWTSLMTGY-------------------------------GMHGRGEEALHLFDQMQK 577
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLG 354
G + D TF VL CS +D G
Sbjct: 578 LGFAVDGITFLVVLYACSHSGMVDQG 603
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 35/176 (19%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
++ I A+ +FD M R+ V+W ++ GY +G + A+ LF+QM + D T+
Sbjct: 530 KSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLV 589
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISG---------YVC-------NGLIDE 101
V+ S GM + ++ ++ M+ G Y C G ++E
Sbjct: 590 VLYACSHS-----------GMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNE 638
Query: 102 ALRVFHGMPLK-DVVSWNLVIGAL---VNCQRMDLAESYFKEMGARDVASWTIMVN 153
A+ + M ++ V W ++ A N + + A S E+GA + S+T++ N
Sbjct: 639 AMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSN 694
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 202/743 (27%), Positives = 339/743 (45%), Gaps = 129/743 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF------------NQMPE---- 49
+ +A+ +FD+MP R WN MI Y NG +A+ L+ + P
Sbjct: 132 LDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKA 191
Query: 50 ----RDM-------------------FTYNTVIAGLMQSDNVQGAKEVFDGMEVR-DVVT 85
RD+ F N +++ ++D++ A+ +FDG + + D V
Sbjct: 192 CAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL 251
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPL---------------------------------- 111
WNS++S Y +G E L +F M +
Sbjct: 252 WNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL 311
Query: 112 ------KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
++ N +I C +M AE ++M DV +W ++ G V+ EA
Sbjct: 312 KSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEAL 371
Query: 166 KLFDKMPA---------------------------------------KDVQAWNLMIAGY 186
+ F M A ++Q N +I Y
Sbjct: 372 EFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMY 431
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF----KQMPETCEKTWN 242
F +MHD+DL SW +I G + A+ F K+ E E
Sbjct: 432 SKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILG 491
Query: 243 SII---SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
SI+ SVL +VKE H ++ + + ++ Y + +G A +VFE + +D
Sbjct: 492 SILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKD 551
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
V W MI N E ++ F +M E+G S D+ +L+ + L L+ GR+IH
Sbjct: 552 VVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHC 611
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
++ +++ A++ MYA CG++QSA F + ++ + S+I HG +
Sbjct: 612 YLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKA 671
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A+ELF++MR + PD I+F+ +L ACS+AGL+D+GR + M+++Y L+P HY C+V
Sbjct: 672 AVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLV 731
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
D+LGR + EA + ++ E + VW ALL ACR H+ ++GEIA +R++ELEP
Sbjct: 732 DMLGRANCVVEAFEFVKMMKT---EPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPK 788
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
N G ++++ ++ GR D +++ A+MK +G++K PGCSWI+++ H F + D SHP+
Sbjct: 789 NPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPE 848
Query: 600 FHRLRYLLNLLHTEIEREILFDA 622
+ L+ + ++ERE+ + A
Sbjct: 849 SKEIYEKLSEVTRKLEREVGYVA 871
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 137/290 (47%), Gaps = 27/290 (9%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G + +A K+FD+MP + AWN MI Y+ NG A L+ W + G
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALY----------WNMRVEG-- 177
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+ +S F + + C K + IR+G E HS L K Y + N +V
Sbjct: 178 ----VPLGLSSFPALLKACAKLRD------IRSG--SELHSLLVKLGYHSTGFIVNALVS 225
Query: 279 -YFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + ++ +A ++F+ + D +WN ++ + E L+ F +M +GP+P++
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 285
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT-VSNAMITMYARCGNIQSALLEFSS 395
T S LT C LG++IHA +K + + V NA+I MY RCG + A
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+ D+++WNS+I G + ++ALE F M K D+++ +++A
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 133/601 (22%), Positives = 237/601 (39%), Gaps = 134/601 (22%)
Query: 43 LFNQMPERDM-FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDE 101
+F P ++ F ++ + ++ A++VFD M R WN+MI YV NG
Sbjct: 106 IFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPAS 165
Query: 102 ALRVF-----HGMP---------------LKDVVSWN---------------LVIGALVN 126
AL ++ G+P L+D+ S + ++ ALV+
Sbjct: 166 ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVS 225
Query: 127 --CQRMDLAESY-----FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM----PA-- 173
+ DL+ + F+E G D W +++ G+ +E +LF +M PA
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKG--DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPN 283
Query: 174 --------------------KDVQA--------------WNLMIAGYLDNGCVGVAEDLF 199
K++ A N +IA Y G + AE +
Sbjct: 284 SYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERIL 343
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN-SIISVLIRNGLVK--- 255
++M++ D+ +W LI G V + A+ +F M K+ S+ S++ +G +
Sbjct: 344 RQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 403
Query: 256 ---EAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
E H+Y+ K+ + SN+ +I Y + + F M +D+ W +I G
Sbjct: 404 AGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYA 463
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+ND E L+ F + + D S+L S L ++ + ++IH ++ T
Sbjct: 464 QNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLD-TV 522
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
+ N ++ +Y +C N+ A F S+ D++SW S+I A +G +A+ELF RM T
Sbjct: 523 IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG 582
Query: 432 FKPDDITF-----------------------------------VGVLSACSYAGLVDQGR 456
D + V V+ + G + +
Sbjct: 583 LSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAK 642
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
FD ++ K LQ YT +++ G G A+ L +++R + + + ALL A
Sbjct: 643 AVFDRIERKGLLQ-----YTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYA 697
Query: 517 C 517
C
Sbjct: 698 C 698
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 109/279 (39%), Gaps = 43/279 (15%)
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN-QFTTVSNAMITMYARCGNIQSAL 390
SP A F VL +C + GRQ+H++ K + + ++ ++ MY +CG++ A
Sbjct: 78 SPVEA-FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAE 136
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS--- 447
F +P +WN++I +G AL L+ MR+ +F +L AC+
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 196
Query: 448 --------YAGLVDQG------------------------RYYFDCMKNKYFLQPRSAHY 475
++ LV G R FD + K + +
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK----GDAVLW 252
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
++ G E + L E+ G + + L AC + K+G+ V++
Sbjct: 253 NSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLK 312
Query: 536 LEPNNSGVYLI--LTEMYLSCGRREDAKRIFAQMKENGV 572
++S +Y+ L MY CG+ A+RI QM V
Sbjct: 313 SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADV 351
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 198/634 (31%), Positives = 327/634 (51%), Gaps = 35/634 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTY 55
+R + +A +F KM +R+ +WNV++ GY K G+ D AMCL+++M + D++T+
Sbjct: 140 VRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTF 199
Query: 56 NTVIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
V+ ++ KEV G E+ D+ N++I+ YV G + A +F MP
Sbjct: 200 PCVLRTCGGIPDLARGKEVHVHVVRYGYEL-DIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 111 LKDVVSWNLVI-GALVNCQRMDLAESYFKEMGAR---DVASWTIMVN-----GLVREGRI 161
+D++SWN +I G N + E +F G D+ + T +++ G R GR
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
+ A + A D+ N + YL+ G AE LF +M +D+ SW +I+G +
Sbjct: 319 IHAYVITTGF-AVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNF 377
Query: 222 RIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVK---EAHSY-LEKYPYSNIASWT 273
D AI ++ M + K T +++S G + E H ++ S +
Sbjct: 378 LPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
N+I Y + + A+ +F + ++V W +I GL N+ E L F QMK + P
Sbjct: 438 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQP 496
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+ T T+ L C+ + L G++IHA ++ + NA++ MY RCG + +A +F
Sbjct: 497 NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF 556
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+S D+ SWN ++ G + G +ELF+RM + +PD+ITF+ +L CS + +V
Sbjct: 557 NSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVR 615
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
QG YF M++ Y + P HY CVVDLLGR G + EA + ++ + P VWGAL
Sbjct: 616 QGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKM---PVTPDPAVWGAL 671
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
L ACRIH+ I +GE++ + + EL+ + G Y++L +Y CG+ + ++ MKENG+
Sbjct: 672 LNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLT 731
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
+ GCSW+++ H FLS D HP+ + +L
Sbjct: 732 VDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVL 765
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 211/464 (45%), Gaps = 46/464 (9%)
Query: 90 ISGYVCNGLIDEALRVFHGM-PLKDVVSWNLVIGALVNCQRMDLAESYFK-------EMG 141
+ G NG ++EA+++ + M L+ V ++ + + C+ E K M
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+ V + VR G +V+A +F KM +++ +WN+++ GY G A L+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M W + G + + F + TC I L R KE H ++
Sbjct: 186 M------LW---VGG------VKPDVYTFPCVLRTCGG-----IPDLARG---KEVHVHV 222
Query: 262 EKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+Y Y +I +I Y + G+V SA +F+ M RD+ WN MI G EN + EGL
Sbjct: 223 VRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGL 282
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
+ F M+ PD T TSV++ C L LGR IHA I +V N++ MY
Sbjct: 283 ELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMY 342
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
G+ + A FS + DI+SW ++I G Y+ +KA++ + M KPD+IT
Sbjct: 343 LNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVA 402
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV----VDLLGRFGLIDEAMNLLN 496
VLSAC+ G +D G +K ++ R Y V +++ + ID+A+++ +
Sbjct: 403 AVLSACATLGDLDTGVEL-----HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV-MELEPN 539
I + W +++ R++N I ++ M L+PN
Sbjct: 458 NIPRKNV----ISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPN 497
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 179/385 (46%), Gaps = 34/385 (8%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-----P 110
N +A ++ N+ A VF M R++ +WN ++ GY G DEA+ ++H M
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 111 LKDVVSWNLVI---GALVNCQRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARK 166
DV ++ V+ G + + R + G D+ ++ V+ G + AR
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
LFD+MP +D+ +WN MI+GY +NG +LF M R L+ +D
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM--RGLS--------------VDPD 296
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEV 285
+ + CE +L L ++ H+Y+ ++ +I+ ++ Y G
Sbjct: 297 LMTLTSVISACE--------LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSW 348
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A K+F M +D+ W MI G N L ++ + + M + PD T +VL+ C
Sbjct: 349 REAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSAC 408
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
+ L LD G ++H AIK + V+N +I MY++C I AL F ++P ++ISW
Sbjct: 409 ATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWT 468
Query: 406 SIICGLAYHGYAEKALELFERMRLT 430
SII GL + +AL +M++T
Sbjct: 469 SIIAGLRLNNRCFEALIFLRQMKMT 493
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 193/696 (27%), Positives = 334/696 (47%), Gaps = 109/696 (15%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I ++ LFD+MP+RD TWN ++ Y K L++A LF +MPER++ ++NT+I+ L ++
Sbjct: 56 IDASRRLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRN 115
Query: 66 DNVQGAKEV-----FDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+V G+ ++ ++ N+++ Y I +A++ F +P + V
Sbjct: 116 GACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEV 175
Query: 116 SWNLVIGALVNCQRMDLAESYFK---------------------------EMGARD---- 144
S+ ++G L + +++ A F+ E G D
Sbjct: 176 SFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDV 235
Query: 145 ---------VASWTI-------------MVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
V TI +++ + G + A +F MP V +WN+M
Sbjct: 236 LSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVM 295
Query: 183 IAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
IAGY A + Q+M + D ++ ++ + S I+A F M
Sbjct: 296 IAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSL 355
Query: 239 KTWNSIISVLIRNGLVKEA--------------------------------------HSY 260
+WN+I+S +N KEA H+
Sbjct: 356 SSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAV 415
Query: 261 LEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+K + ++I + +I Y + G+V A ++F+ + D+ WN M+ GL N L +E
Sbjct: 416 SQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEA 475
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
FF +M+E G P ++ +VL+ C+ L +L GRQ+H+Q + V +A+I M
Sbjct: 476 FTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDM 535
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y++CG++ +A F + + ++WN +I G A +G ++A+ L+E M + KPD ITF
Sbjct: 536 YSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITF 595
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
V VL+ACS++GLVD G F+ M+ ++ ++P HYTC++D LGR G + EA L++++
Sbjct: 596 VAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMP 655
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRED 559
+ P +W LL +CR++ ++ + A E + L+P NS Y++L +Y S GR +D
Sbjct: 656 C---KYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDD 712
Query: 560 AKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
AK + M N V K+PG SWI+ +G F+ D+
Sbjct: 713 AKAVRELMSYNQVVKDPGYSWIEHKNGMQAFMVDDN 748
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 246/508 (48%), Gaps = 37/508 (7%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
DT N +I Y K +D + LF+QMP+RD++T+N ++ ++ ++ A +F M
Sbjct: 39 DTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMP 98
Query: 80 VRDVVTWNSMISGYV----CNGLID-EALRVFHGMPLK-----DVVSWNLVIGALVNCQR 129
R++V+WN++IS C L+D E R HG+ +K ++ N ++G C+
Sbjct: 99 ERNIVSWNTLISALTRNGACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRC 158
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD- 188
+ A F ++ + S+T M+ GL ++ EA +LF M + ++ ++ L
Sbjct: 159 IGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGV 218
Query: 189 ---NGC----VGVAEDLF------QKMH--------DRDLTSWKQLINGLVNSRRIDAAI 227
GC + + D+ Q++H + DL L++ + +D+A
Sbjct: 219 CSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAE 278
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYFEMG 283
F MPE +WN +I+ + +A YL++ Y ++ N++V + G
Sbjct: 279 MIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSG 338
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
++ + ++F+ M++ ++ WN ++ G +N+ +E +K F +M+ PD T +L+
Sbjct: 339 DIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILS 398
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
+ + L+ GRQ+HA + K +++ +I MY++CG ++ A F + DI+
Sbjct: 399 SLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVC 458
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
WNS++ GL+ + ++A F++MR P ++ VLS C+ + QGR +
Sbjct: 459 WNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIA 518
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
+ ++ + ++D+ + G +D A
Sbjct: 519 REGYMNDAFVG-SALIDMYSKCGDVDAA 545
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 197/426 (46%), Gaps = 47/426 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
+N + A+ +F MP+ V+WNVMI GY + A+ +M E D TY
Sbjct: 270 KNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVN 329
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV--- 114
++ ++S +++ +++FDGM + +WN+++SGY N EA+++F M + V
Sbjct: 330 MLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPD 389
Query: 115 -VSWNLVIGALVNCQRMDLAESYF----KEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
+ +++ +L ++ K + D+ + ++ + G++ A+++FD
Sbjct: 390 RTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFD 449
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
++ D+ WN M+AG N A F+KM ++ G+ S+ SY
Sbjct: 450 RIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREK----------GMFPSQ-----FSY 494
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSA 288
+ C K +S L + ++ HS + + Y N A + ++ Y + G+V +A
Sbjct: 495 ATVL-SCCAK-----LSSLSQG---RQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAA 545
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
VF++M ++ WN MI G +N G+E + + M SG PD TF +VLT CS
Sbjct: 546 RWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHS 605
Query: 349 PTLDLGRQI-----HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI-HDII 402
+D G +I ++ + +T + +++ R G + A + +P +D I
Sbjct: 606 GLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSL----GRAGRLHEAEVLIDKMPCKYDPI 661
Query: 403 SWNSII 408
W ++
Sbjct: 662 IWEVLL 667
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 125/321 (38%), Gaps = 56/321 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER---- 50
+++ I+ + +FD M +WN ++ GY +N A+ LF +M P+R
Sbjct: 335 IKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLA 394
Query: 51 -----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
D++ + +I + V+ AK +FD +
Sbjct: 395 IILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAEL 454
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC--------QRMDLA 133
D+V WNSM++G N L EA F M K + +++C Q +
Sbjct: 455 DIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVH 514
Query: 134 ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC-- 191
+E D + +++ + G + AR +FD M K+ WN MI GY NGC
Sbjct: 515 SQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGD 574
Query: 192 --VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSI 244
V + ED+ D ++ ++ +S +D I F M E + I
Sbjct: 575 EAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCI 634
Query: 245 ISVLIRNGLVKEAHSYLEKYP 265
I L R G + EA ++K P
Sbjct: 635 IDSLGRAGRLHEAEVLIDKMP 655
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 13/232 (5%)
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF-E 281
++ +Y + +TC + LI H+++ + S+ +N ++ ++ +
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLI--------HAHMLRSRLSDDTFLSNRLIEFYAK 52
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
+ ++ ++F+ M RD+ WN ++ + E+ F +M E N T S
Sbjct: 53 CNAIDASRRLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWN-TLISA 111
Query: 342 LT---ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
LT C L ++ GR+ H +IKI + V NA++ MYA+C I A+ F VP
Sbjct: 112 LTRNGACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPE 171
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
+ +S+ +++ GLA +A LF M D ++ VL CS G
Sbjct: 172 PNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGG 223
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 49/232 (21%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
+ +++ A+ +FD++ + D V WN M+ G N A F +M E+ M F+Y T
Sbjct: 437 KCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYAT 496
Query: 58 VIA---------------------GLM--------------QSDNVQGAKEVFDGMEVRD 82
V++ G M + +V A+ VFD M ++
Sbjct: 497 VLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKN 556
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAESYFK 138
VTWN MI GY NG DEA+ ++ M D +++ V+ A + +D F
Sbjct: 557 TVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFN 616
Query: 139 EMGARD-----VASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIA 184
M V +T +++ L R GR+ EA L DKMP K D W ++++
Sbjct: 617 SMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLS 668
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 177/625 (28%), Positives = 331/625 (52%), Gaps = 29/625 (4%)
Query: 11 NLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQG 70
N+ +P +T +N ++ Y A +F+++P+ ++F++N ++ ++ +
Sbjct: 31 NIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISE 90
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
+ F+ + RD VTWN +I GY +GL+ A++ ++ M ++D S NL L+ ++
Sbjct: 91 MESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRDF-SANLTRVTLMTMLKL 148
Query: 131 DLAESYF---KEMGARDVA----SWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAW 179
+ + K++ + + S+ ++ + L+ G I +A+K+F + ++ +
Sbjct: 149 SSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMY 208
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----E 235
N ++ G L G + A LF+ M ++D SW +I GL + AI F++M +
Sbjct: 209 NSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLK 267
Query: 236 TCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSN-IASWTNVIVGYFEMGEVGSAIKV 291
+ + S++ G + K+ H+ + + + + I + +I Y + + A V
Sbjct: 268 MDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTV 327
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F+ M ++V W M+ G G+ EE +K F+ M+ SG PD+ T ++ C+++ +L
Sbjct: 328 FDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSL 387
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
+ G Q H +AI + TVSN+++T+Y +CG+I + F+ + + D +SW +++
Sbjct: 388 EEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAY 447
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
A G A + ++LF++M KPD +T GV+SACS AGLV++G+ YF M ++Y + P
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPS 507
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV--WGALLGACRIHNNIKVGEIA 529
HY+C++DL R G ++EAM +N G+ P W LL ACR N+++G+ A
Sbjct: 508 IGHYSCMIDLFSRSGRLEEAMRFIN-----GMPFPPDAIGWTTLLSACRNKGNLEIGKWA 562
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
E ++EL+P++ Y +L+ +Y S G+ + ++ M+E VKKEPG SWI+ H
Sbjct: 563 AESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHS 622
Query: 590 FLSGDSSHPKFHRLRYLLNLLHTEI 614
F + D S P ++ L L+ +I
Sbjct: 623 FSADDESSPYLDQIYAKLEELNNKI 647
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 131/570 (22%), Positives = 228/570 (40%), Gaps = 116/570 (20%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM-- 63
I E ++ F+K+P RD VTWNV+I GY +G + A+ +N M RD F+ N LM
Sbjct: 88 ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRD-FSANLTRVTLMTM 145
Query: 64 ---QSDN-------------------------------------VQGAKEVFDGMEVRDV 83
S N + AK+VF G++ R+
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
V +NS++ G + G+I++AL++F GM KD VSW +I L A F+EM +
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 144 DV-------ASWTIMVNGL--VREGRIVEA---RKLFDKMPAKDVQAWNLMIAGYLDNGC 191
+ S GL + EG+ + A R F + + +I Y C
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ----DHIYVGSALIDMYCKCKC 320
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISV 247
+ A+ +F +M +++ SW ++ G + R + A+ F M + T IS
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNV----IVGYFEMGEVGSAIKVFELMTTRDVTVW 303
++E + K S + + V + Y + G++ + ++F M RD W
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
M+ + E ++ F +M + G PD T T V++ CS ++ G++ K
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY----FK 496
Query: 364 IARNQFTTVS-----NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
+ +++ V + MI +++R G ++ A+ + +P
Sbjct: 497 LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP--------------------- 535
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP-RSAHYTC 477
F PD I + +LSAC G ++ G++ + + L P A YT
Sbjct: 536 -------------FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE---LDPHHPAGYTL 579
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
+ + G D L +R ++ P
Sbjct: 580 LSSIYASKGKWDSVAQLRRGMREKNVKKEP 609
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 7/218 (3%)
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
+ IH I+ T + N ++ YA + A F +P ++ SWN+++ +
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
G + FE++ D +T+ ++ S +GLV ++ M +
Sbjct: 86 GLISEMESTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM 534
++ L G + + ++ G E V LL ++ N+ A +
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL---YMYANVGCISDAKKVFY 198
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
L+ N+ +Y L L+CG EDA ++F M+++ V
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV 236
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 192/642 (29%), Positives = 309/642 (48%), Gaps = 54/642 (8%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNA--MCLFNQM------PERDMFT 54
+ + A +LFD++P D T+N +IR Y + A + L+ +M P F
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129
Query: 55 YNTVIAGLMQSDNVQGA---KEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+ + + A + G++ D+ +++ YV + +A +F MP
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQA-DLFVSTALLDMYVKCACLPDAAHIFATMPA 188
Query: 112 KDVVSWNLVIG----------ALVNCQRMDLAESYFKEMGARDVASWTIMVN-GLVREGR 160
+D+V+WN ++ A+ + M + + + VA ++ G + +G
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248
Query: 161 IVEA----------RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
V A R K+ V ++ Y G + A +F M R+ +W
Sbjct: 249 SVHAYCIRACLHPNRNSKSKL-TDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTW 307
Query: 211 KQLINGLVNSRRIDAAISYFKQMPET--CEKTWNSIISVL--------IRNGLVKEAHSY 260
LI G V R+ A FK M C + SI S L +R G ++ H+
Sbjct: 308 SALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMG--EQLHAL 365
Query: 261 LEKYP-YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
L K ++++ + +++ Y + G + AI +F+ M +D ++ ++ G +N EE
Sbjct: 366 LAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEA 425
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
F +M+ PD AT S++ CS L L GR H I T++ NA+I M
Sbjct: 426 FLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDM 485
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
YA+CG I + F+ +P DI+SWN++I G HG ++A LF M F PD +TF
Sbjct: 486 YAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTF 545
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE-- 497
+ +LSACS++GLV +G+++F M + Y L PR HY C+VDLL R G +DEA +
Sbjct: 546 ICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMP 605
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
+RAD VW ALLGACR++ NI +G+ + EL P +G +++L+ +Y + GR
Sbjct: 606 LRAD-----VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRF 660
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
++A + K G KK PGCSWI+IN H F+ GD SHP+
Sbjct: 661 DEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 702
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 183/598 (30%), Positives = 318/598 (53%), Gaps = 54/598 (9%)
Query: 33 KNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISG 92
K G+L+ +C+ ++ DMF S ++ A +VFD M R++VTW MI+
Sbjct: 174 KTGYLEADVCVGCELI--DMFVKG--------SGDLGSAYKVFDKMPERNLVTWTLMITR 223
Query: 93 YVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAE---SYFKEMG-ARD 144
+ G +A+ +F M L D +++ V+ A + L + S +G A D
Sbjct: 224 FAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALD 283
Query: 145 VASWTIMVNGLVR---EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG-CVGVAEDLFQ 200
V +V+ + +G + ++RK+F++MP +V +W +I Y+ +G C A +LF
Sbjct: 284 VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFC 343
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
KM I+G + F + + C + ++ +SY
Sbjct: 344 KM-----------ISGHIRPNHFS-----FSSVLKACGNLSDPYTG--------EQVYSY 379
Query: 261 LEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
K +++ N ++ Y G + A K F+++ +++ +N ++ G +N EE
Sbjct: 380 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 439
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
F ++ ++G TF S+L+ + + + G QIH + +K + NA+I+M
Sbjct: 440 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 499
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y+RCGNI++A F+ + ++ISW S+I G A HG+A +ALE+F +M T KP++IT+
Sbjct: 500 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 559
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE-- 497
V VLSACS+ G++ +G+ +F+ M ++ + PR HY C+VDLLGR GL+ EAM +N
Sbjct: 560 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 619
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
+ AD + VW LLGACR+H N ++G A E ++E EP++ Y++L+ ++ S G+
Sbjct: 620 LMADAL-----VWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQW 674
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+D +I MKE + KE GCSWI++ + H F G++SHP+ ++ L+ L ++I+
Sbjct: 675 KDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 732
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 133/527 (25%), Positives = 240/527 (45%), Gaps = 65/527 (12%)
Query: 4 ARIQEAQNLFDKMPQR----DTVTWNVMIRG--YFKNGFLDNAMC--LFNQMPERDMFTY 55
R+ A + D M Q+ D T++++++ F+N L + L E D
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82
Query: 56 NTVIAGLMQSDNVQGAKEVFDGM-EVRDVVTWNSMISGYVCNGLIDEALRVFHGMP---- 110
NT+I+ + + + A+ +F+GM RD+V+W++M+S + N + +A+ F M
Sbjct: 83 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142
Query: 111 LKDVVSWNLVIGALVNCQRMDLAE---SYFKEMG--ARDVASWTIMVNGLVR-EGRIVEA 164
+ + VI A N + E + + G DV +++ V+ G + A
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 202
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
K+FDKMP +++ W LMI + GC A DLF M ++G V R
Sbjct: 203 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDME----------LSGYVPDRF-- 250
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYS-NIASWTNVIVGYF 280
T++S++S GL+ K+ HS + + + ++ +++ Y
Sbjct: 251 ---------------TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYA 295
Query: 281 EM---GEVGSAIKVFELMTTRDVTVWNVMIFGL---GENDLGEEGLKFFVQMKESGPSPD 334
+ G V + KVFE M +V W +I GE D +E ++ F +M P+
Sbjct: 296 KCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECD--KEAIELFCKMISGHIRPN 353
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ +F+SVL C +L G Q+++ A+K+ V N++I+MYAR G ++ A F
Sbjct: 354 HFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFD 413
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+ +++S+N+I+ G A + +E+A LF + T TF +LS + G + +
Sbjct: 414 ILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGK 473
Query: 455 G-RYYFDCMKNKYFLQPRSAHYTC--VVDLLGRFGLIDEAMNLLNEI 498
G + + +K Y +S C ++ + R G I+ A + NE+
Sbjct: 474 GEQIHGRLLKGGY----KSNQCICNALISMYSRCGNIEAAFQVFNEM 516
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 105/233 (45%), Gaps = 49/233 (21%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
R+ R+++A+ FD + +++ V++N ++ GY KN + A LFN++ + + FT+ +
Sbjct: 401 RSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFAS 460
Query: 58 VIAGLM-----------------------------------QSDNVQGAKEVFDGMEVRD 82
+++G + N++ A +VF+ ME R+
Sbjct: 461 LLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRN 520
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAESYFK 138
V++W SMI+G+ +G AL +FH M + +++ V+ A + + + +F
Sbjct: 521 VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFN 580
Query: 139 EMGARD-----VASWTIMVNGLVREGRIVEARKLFDKMP-AKDVQAWNLMIAG 185
M + + MV+ L R G +VEA + + MP D W ++
Sbjct: 581 SMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 633
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 158/361 (43%), Gaps = 32/361 (8%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDN-AMCLFNQMPE----RDMFTYNT 57
+ + +++ +F++MP+ + ++W +I Y ++G D A+ LF +M + F++++
Sbjct: 300 DGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSS 359
Query: 58 VIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V+ + ++V+ G+ + V NS+IS Y +G +++A + F + K
Sbjct: 360 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVG-NSLISMYARSGRMEDARKAFDILFEK 418
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVEARKLF 168
++VS+N ++ + + A F E+ + ++ +++G G + + ++
Sbjct: 419 NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIH 478
Query: 169 DKMPAKDVQA----WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
++ ++ N +I+ Y G + A +F +M DR++ SW +I G
Sbjct: 479 GRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFAT 538
Query: 225 AAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEK-YPYSNIASWTNVIVGY 279
A+ F +M ET K T+ +++S G++ E + Y I
Sbjct: 539 RALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACM 598
Query: 280 FE-MGEVGSAIKVFELMTT----RDVTVWNVMIFGL---GENDLGEEGLKFFVQMKESGP 331
+ +G G ++ E + + D VW ++ G +LG + ++ + P
Sbjct: 599 VDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDP 658
Query: 332 S 332
+
Sbjct: 659 A 659
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 192/654 (29%), Positives = 316/654 (48%), Gaps = 60/654 (9%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFL----DNAMCLFNQMPERDMFTYNTVIA 60
++ A LFD+MP RD+V+WN MI G+ G L D C+ + E D +T+ +++
Sbjct: 48 ELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLK 107
Query: 61 GLMQSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
G+ + ++V + +V ++++ Y +++A F + + VS
Sbjct: 108 GIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVS 167
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
WN +I + + G R+ A W +++ + +EG V+ +P D
Sbjct: 168 WNAMING-------------YAQAGDRETAFW--LLDCMEQEGEKVDDGTYAPLLPLLDD 212
Query: 177 QAW-----------------------NLMIAGYLDNGCVGVAEDLFQKMHD-RDLTSWKQ 212
+ N +I Y G + A+ +F RDL +W
Sbjct: 213 ADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNS 272
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEKYP 265
L+ + + D A M E + ++ SIIS + + H + K
Sbjct: 273 LLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRG 332
Query: 266 YSNIASWTNVIVGYFEMGEVGS---AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ +N ++ + + GS A+ +FE + +D WN ++ GL + E+ +K
Sbjct: 333 FEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKS 392
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F+ M+ + D+ +F++VL CSDL T LG+QIH A+K VS+++I MY++
Sbjct: 393 FLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSK 452
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CG I+ A F + I+WN+++ G A HG AL+LF M K D ITFV V
Sbjct: 453 CGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAV 512
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
L+ACS+ GLV+QG + CM++ Y + PR HY C VDL GR G ++EA L+ E+
Sbjct: 513 LTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMP--- 569
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
+ TVW LGACR NI++ ++E+EP Y++L+ MY + R ++ +
Sbjct: 570 FKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAK 629
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+ MKE GVKK PG SWI++N+ H F++ D SHP ++ +LL +L EI R
Sbjct: 630 VKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIYFLLEVLLEEITR 683
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 190/440 (43%), Gaps = 46/440 (10%)
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
DV N ++ GY + A+ LF +M RD SW +I G +N ++A+ + M
Sbjct: 32 DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMR 91
Query: 235 ----ETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVG 286
E T+ S++ + G+ ++ HS + K Y+ N+ + + ++ Y + ++
Sbjct: 92 SCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLE 151
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A F ++ + WN MI G + E M++ G D+ T+ +L +
Sbjct: 152 DAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLD 211
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF-SSVPIHDIISWN 405
D +L Q+H + IK T+ NA+IT Y++CG++ A F SS I D+++WN
Sbjct: 212 DADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWN 271
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNK 465
S++ + A +L M+ F+PD ++ ++SAC + + GR + +
Sbjct: 272 SLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKR 331
Query: 466 YFLQ--PRS------------------------------AHYTCVVDLLGRFGLIDEAMN 493
F Q P S + ++ L + G ++A+
Sbjct: 332 GFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVK 391
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE---PNNSGVYLILTEM 550
+R+ +++ + A+L +C ++G+ V+ L+ +N V L M
Sbjct: 392 SFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQI--HVLALKYGLESNEFVSSSLIFM 449
Query: 551 YLSCGRREDAKRIFAQMKEN 570
Y CG EDA+R F + +N
Sbjct: 450 YSKCGIIEDARRSFEEASKN 469
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%)
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
+++ + N++ GY++ E+ SA +F+ M RD WN MI G E M
Sbjct: 31 ADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCM 90
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
+ G D TF S+L + LG+Q+H+ IK+ + +A++ MYA+C +
Sbjct: 91 RSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKL 150
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
+ A L F S+ H+ +SWN++I G A G E A L + M K DD T+ +L
Sbjct: 151 EDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLL 207
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 181/575 (31%), Positives = 307/575 (53%), Gaps = 40/575 (6%)
Query: 54 TYNTVIAGL--MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-- 109
+ N +IA + M S V A VF V DV+TWNSM+ +V + + AL+ + M
Sbjct: 12 SLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLE 71
Query: 110 PLKDVVSWNLVIGALVNCQRM-------DLAESYFKEMGARDVASWTIMVNGLVREGRIV 162
++V L C + L K M D+ T ++N G +
Sbjct: 72 RSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLK 131
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
AR LF++M ++ W MI+GY+ N C A L++KM + + + + LV
Sbjct: 132 SARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLV---- 187
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFE 281
+A + K + G+ + HS++ + A + +V Y +
Sbjct: 188 --SACAELKDL------------------GVGMKLHSHIREMDMKICAVLGSALVNMYAK 227
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE-SGPSPDNATFTS 340
G++ +A +VF+ ++ +DV W+ +IFG +N+ E L+ F ++ S P+ T +
Sbjct: 228 CGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILA 287
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
V++ C+ L L+ GR +H + + +++N++I M+++CG+I +A F S+ D
Sbjct: 288 VISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKD 347
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+ISWNS++ GLA HG +AL F M+ TD +PD+ITF+GVL+ACS+AGLV +G+ F
Sbjct: 348 LISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFY 407
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
++ Y ++ +S HY C+VDLL R GL+ EA IR ++ +WG++LGACR++
Sbjct: 408 EIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREF---IRVMPLQPDGAIWGSMLGACRVY 464
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
NN+++GE A ++ELEP N GVY++L+ +Y + K++ M E G++K PGCS
Sbjct: 465 NNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSS 524
Query: 581 IQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+ I++ H FL+GD SHP+ + +L + +++
Sbjct: 525 VVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLK 559
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 174/398 (43%), Gaps = 72/398 (18%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVIAG-- 61
A ++F D +TWN M+R + + A+ + +M ER D FT+ +++ G
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 62 ------------------LMQSD---------------NVQGAKEVFDGMEVRDVVTWNS 88
++ SD +++ A+ +F+ M R+ V W S
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 89 MISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLA---ESYFKEMG 141
MISGY+ N +EAL ++ M D V+ ++ A + + + S+ +EM
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 142 ARDVASW-TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
+ A + +VN + G + AR++FD++ KDV AW+ +I GY+ N A LF+
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
++ N N I A IS Q+ + W H Y
Sbjct: 271 EVAGGS--------NMRPNEVTILAVISACAQLGDLETGRW---------------VHDY 307
Query: 261 LEKYPYSNIASWTNVIVGYF-EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+ + + S N ++ F + G++ +A ++F+ M+ +D+ WN M+ GL + LG E
Sbjct: 308 ITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREA 367
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
L F M+ + PD TF VLT CS + G+++
Sbjct: 368 LAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKL 405
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 147/357 (41%), Gaps = 64/357 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
++ A+ LF++M R+ V W MI GY KN + A+ L+ +M E D T T+++
Sbjct: 130 LKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSA 189
Query: 62 LMQ-----------------------------------SDNVQGAKEVFDGMEVRDVVTW 86
+ +++ A++VFD + +DV W
Sbjct: 190 CAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAW 249
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWN--LVIGALVNCQRMDLAES-------YF 137
+++I GYV N EAL++F + + N ++ + C ++ E+
Sbjct: 250 SALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYIT 309
Query: 138 KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+ V+ +++ + G I A+++FD M KD+ +WN M+ G +G A
Sbjct: 310 RTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALA 369
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE---------KTWNSIISVL 248
F M DL + G++ + + K++ E + + ++ +L
Sbjct: 370 QFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLL 429
Query: 249 IRNGLVKEAHSYLEKYPYS-NIASWTNV-----IVGYFEMGEVGSAIKVFELMTTRD 299
R GL+ EA ++ P + A W ++ + E+GE +A + EL T D
Sbjct: 430 CRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGE-EAARCLLELEPTND 485
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 190/677 (28%), Positives = 328/677 (48%), Gaps = 85/677 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ R E+ +F +P++++V+W+ +I G +N L A+ F +M + + ++ A
Sbjct: 185 KGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYAS 244
Query: 62 LMQS---------------------------------------DNVQGAKEVFDGMEVRD 82
+++S DN+Q A+ +FD E +
Sbjct: 245 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLN 304
Query: 83 VVTWNSMISGYVCNGLIDEALRVFH-----GMPLKDVV------SWNLVIGALVNCQRMD 131
++N+MI+GY +AL +FH G+ ++ + LV G Q D
Sbjct: 305 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYD 364
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
LA K + DV ++ + + EA ++FD+M +D +WN +IA + NG
Sbjct: 365 LA---IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 421
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN--------S 243
LF M R + G V ++ Y ++ + K+ S
Sbjct: 422 GYETLFLFVSML-RSRIEPDEFTFGSVLKACTGGSLGYGMEIHSSIVKSGMASNSSVGCS 480
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV--- 300
+I + + G+++EA ++ F+ V ++ E M + +
Sbjct: 481 LIDMYSKCGMIEEAEKIHSRF---------------FQRTNVSGTMEELEKMHNKRLQEM 525
Query: 301 -TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
WN +I G + E+ F +M E G +PD T+ +VL C++L + LG+QIHA
Sbjct: 526 CVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHA 585
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
Q IK +S+ ++ MY++CG++ + L F D ++WN++ICG A+HG E+
Sbjct: 586 QVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEE 645
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A++LFERM L + KP+ +TF+ +L AC++ GL+D+G YF MK Y L P+ HY+ +V
Sbjct: 646 AIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMV 705
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH-NNIKVGEIAGERVMELEP 538
D+LG+ G + A+ L+ E+ E +W LLG C IH NN++V E A ++ L+P
Sbjct: 706 DILGKSGKVKRALELIREM---PFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDP 762
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+S Y +L+ +Y G E + M+ +KKEPGCSW+++ D HVFL GD +HP
Sbjct: 763 QDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHP 822
Query: 599 KFHRLRYLLNLLHTEIE 615
++ + L L+++E++
Sbjct: 823 RWEEIYEELGLIYSEMK 839
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 145/524 (27%), Positives = 224/524 (42%), Gaps = 79/524 (15%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A +FD+MP RD V+WN MI GY K+ + A FN MP RD+ ++N++++G +Q+
Sbjct: 60 ASMVFDRMPLRDVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGET 119
Query: 69 QGAKEVF----------------------------------DGMEVR-----DVVTWNSM 89
+ EVF G+ VR DVV +++
Sbjct: 120 LKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASAL 179
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
+ Y E+LRVF G+P K+ VSW+ +I V + LA +FKEM +
Sbjct: 180 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 239
Query: 150 IMVNGLVREGRIVEARKLFDKMPA----KDVQAWNLMIAGYLD--NGCVGV--AEDLFQK 201
+ ++R + +L ++ A D A ++ LD C + A+ LF K
Sbjct: 240 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDK 299
Query: 202 MHDRDLTSWKQLINGLVNSRR-IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
+ + S+ +I G A + + + M S+ V LVK
Sbjct: 300 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 359
Query: 261 LEKYPYSNIASWT-NVIVG------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
L+ Y + +S + +V V Y + + A +VF+ M RD WN +I +N
Sbjct: 360 LQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQN 419
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
G E L FV M S PD TF SVL C+ +L G +IH+ +K ++V
Sbjct: 420 GKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVG 478
Query: 374 NAMITMYARCGNIQSA------LLEFSSVP--------IHD------IISWNSIICGLAY 413
++I MY++CG I+ A + ++V +H+ +SWNSII G
Sbjct: 479 CSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 538
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSAC---SYAGLVDQ 454
+E A LF RM PD T+ VL C + AGL Q
Sbjct: 539 KEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 582
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 138/561 (24%), Positives = 252/561 (44%), Gaps = 53/561 (9%)
Query: 21 TVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
T N +++ Y + +A +F++MP RD+ ++N +I G +S+N+ A F+ M V
Sbjct: 41 TFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWNKMINGYAKSNNMVKASFFFNMMPV 100
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLA--- 133
RDVV+WNSM+SGY+ NG +++ VF M D ++ +++ + L
Sbjct: 101 RDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQI 160
Query: 134 ESYFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
+G DV + + +++ + R VE+ ++F +P K+ +W+ +IAG + N +
Sbjct: 161 HGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLL 220
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
+A F++M Q +N V+ S + + +C +R G
Sbjct: 221 SLALKFFKEM---------QKVNAGVSQ-------SIYASVLRSCAALSE------LRLG 258
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
AH+ + I T + Y + + A +F+ + +N MI G +
Sbjct: 259 GQLHAHALKSDFAADGIVR-TATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQ 317
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
+ G + L F ++ SG D + + V C+ + L G QI+ AIK + + V
Sbjct: 318 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCV 377
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+NA I MY +C + A F + D +SWN+II +G + L LF M +
Sbjct: 378 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 437
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
+PD+ TF VL AC+ L + +K+ + S+ ++D+ + G+I+EA
Sbjct: 438 EPDEFTFGSVLKACTGGSLGYGMEIHSSIVKSG--MASNSSVGCSLIDMYSKCGMIEEAE 495
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMY 551
+ + V G + ++HN +R+ E+ + NS + Y
Sbjct: 496 KIHSRFFQ-----RTNVSGTMEELEKMHN---------KRLQEMCVSWNS-----IISGY 536
Query: 552 LSCGRREDAKRIFAQMKENGV 572
+ + EDA+ +F +M E G+
Sbjct: 537 VMKEQSEDAQMLFTRMMEMGI 557
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 111/282 (39%), Gaps = 62/282 (21%)
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
C+ L+LG+Q HA I T V N ++ +Y + SA + F +P+ D++SW
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 405 NSIICGLA--------------------------YHGYAE-----KALELFERMRLTDFK 433
N +I G A GY + K++E+F M +
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 434 PDDITFVGVLSACS--------------------------YAGLVD---QGRYYFDCMKN 464
D TF +L CS + L+D +G+ + + ++
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 465 -KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
+ + S ++ ++ + L+ A+ E++ VS +++ ++L +C + +
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 524 KVGEIAGERVMELEPNNSGVYLILT-EMYLSCGRREDAKRIF 564
++G ++ + G+ T +MY C +DA+ +F
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILF 297
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 200/633 (31%), Positives = 320/633 (50%), Gaps = 51/633 (8%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAM-------------------CL 43
N I +A+ +FD++PQRDT+ WNVM+ GY K+G +NAM C+
Sbjct: 193 NGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCI 252
Query: 44 FNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEAL 103
+ R F T + GL+ + G E D N++++ Y G + +A
Sbjct: 253 LSICATRGKFCLGTQVHGLV----------IGSGFEF-DPQVANTLVAMYSKCGNLFDAR 301
Query: 104 RVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV-------ASW--TIMVNG 154
++F+ MP D V+WN +I V D A F M + V AS+ +I+ +G
Sbjct: 302 KLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESG 361
Query: 155 LVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLI 214
+R + V + + ++P DV + +I Y G V +A +FQ+ D+ +I
Sbjct: 362 SLRHCKEVHSYIVRHRVPF-DVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMI 420
Query: 215 NGLV-NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV------KEAHSYLEKYPYS 267
+G V + IDA ++ + E ++ SVL + KE H + K
Sbjct: 421 SGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLE 480
Query: 268 NIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
NI + + I Y + G + A + F M+ D WN MI +N E + F QM
Sbjct: 481 NIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQM 540
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
SG D+ + +S L+ ++LP L G+++H I+ A + T V++A+I MY++CG +
Sbjct: 541 GMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKL 600
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
A F+ + + +SWNSII HG A + L+LF M PD +TF+ ++SAC
Sbjct: 601 ALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISAC 660
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
+AGLV +G +YF CM +Y + R HY C+VDL GR G + EA + I++
Sbjct: 661 GHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEA---FDAIKSMPFTPD 717
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
VWG LLGACR+H N+++ ++A ++EL+P NSG Y++L+ ++ G ++
Sbjct: 718 AGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRL 777
Query: 567 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
MKE GV+K PG SWI +N G H+F + + +HP+
Sbjct: 778 MKEKGVQKIPGYSWIDVNGGTHMFSAAEGNHPE 810
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 210/458 (45%), Gaps = 28/458 (6%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI 59
RI + NLF + + + WN MIRG + G+ D A+ + +M D +T+ VI
Sbjct: 93 GRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVI 152
Query: 60 AGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
+NV V + G V D+ +++I Y NG I +A RVF +P +D
Sbjct: 153 KACGGLNNVPLCMVVHNTARSLGFHV-DLFVGSALIKLYADNGYICDARRVFDELPQRDT 211
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLFDK 170
+ WN+++ V + A F M + ++T +++ G+ ++
Sbjct: 212 ILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGL 271
Query: 171 MPAK----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ D Q N ++A Y G + A LF M D +W LI G V + D A
Sbjct: 272 VIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEA 331
Query: 227 ISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEKY--PYSNIASWTNVIV 277
F M K T+ S + ++ +G + KE HSY+ ++ P+ ++ + +I
Sbjct: 332 APLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPF-DVYLKSALID 390
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
YF+ G+V A K+F+ T DV V MI G + L + + F + + G P++ T
Sbjct: 391 IYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLT 450
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
SVL C+ L L LG+++H +K V +A+ MYA+CG + A F +
Sbjct: 451 MASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS 510
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
D I WNS+I + +G E A++LF +M ++ K D
Sbjct: 511 ETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFD 548
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 136/306 (44%), Gaps = 24/306 (7%)
Query: 141 GARDVASWTIMVNGL-VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
G DV + + V GL V GRI + LF + + WN MI G G A +
Sbjct: 74 GMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFY 133
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
KM +++ K F + + C N + +++ N +
Sbjct: 134 FKMLGSNVSPDKYT----------------FPYVIKACGGLNNVPLCMVVHN-TARSLGF 176
Query: 260 YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+++ + S + I Y + G + A +VF+ + RD +WNVM+ G ++
Sbjct: 177 HVDLFVGSAL------IKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNA 230
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
+ F M+ S ++ T+T +L+IC+ LG Q+H I V+N ++ M
Sbjct: 231 MGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAM 290
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y++CGN+ A F+++P D ++WN +I G +G+ ++A LF M KPD +TF
Sbjct: 291 YSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTF 350
Query: 440 VGVLSA 445
L +
Sbjct: 351 ASFLPS 356
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 138/344 (40%), Gaps = 32/344 (9%)
Query: 255 KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
++ H+ + S++ + ++ ++G Y G + +F + + WN MI GL
Sbjct: 64 RQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYML 123
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
+ L F+ +M S SPD TF V+ C L + L +H A + + V
Sbjct: 124 GWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVG 183
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
+A+I +YA G I A F +P D I WN ++ G G A+ F MR +
Sbjct: 184 SALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSM 243
Query: 434 PDDITFVGVLSACS----------YAGLVDQGRYYFD--------CMKNK---------- 465
+ +T+ +LS C+ GLV + FD M +K
Sbjct: 244 VNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKL 303
Query: 466 --YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
Q + + ++ + G DEA L N + + G++ + + L + ++
Sbjct: 304 FNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSL 363
Query: 524 K-VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
+ E+ V P + + L ++Y G E A++IF Q
Sbjct: 364 RHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQ 407
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 101/270 (37%), Gaps = 47/270 (17%)
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
S+ CSD + RQ+H Q I + +S+ ++ +Y CG I F + +
Sbjct: 49 SLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELC 108
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS------------ 447
+ + WN +I GL G+ + AL + +M ++ PD TF V+ AC
Sbjct: 109 NALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 168
Query: 448 ---------------------YA--GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
YA G + R FD + Q + + ++ +
Sbjct: 169 NTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELP-----QRDTILWNVMLHGYVK 223
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERV---MELEPNN 540
G + AM +R V+ + +L C +G ++ G + E +P
Sbjct: 224 SGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQ- 282
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
V L MY CG DA+++F M +
Sbjct: 283 --VANTLVAMYSKCGNLFDARKLFNTMPQT 310
>gi|302780000|ref|XP_002971775.1| hypothetical protein SELMODRAFT_60139 [Selaginella moellendorffii]
gi|300160907|gb|EFJ27524.1| hypothetical protein SELMODRAFT_60139 [Selaginella moellendorffii]
Length = 516
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 166/518 (32%), Positives = 267/518 (51%), Gaps = 7/518 (1%)
Query: 54 TYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
++N +I +Q++ V +K +FD M RD +TWNS++S Y G ++EA +F+ MP +D
Sbjct: 1 SWNIIITACIQNNAVGESKGLFDRMPERDTITWNSLLSAYAQRGHLEEANDLFYMMPERD 60
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
+SWN +I A + +DLA+ + M SW++M+ G + + R LFD MP
Sbjct: 61 YMSWNTLIQASASSN-LDLAQEIYHYMPEHSHVSWSVMLTAYANFGHLDKTRSLFDSMPE 119
Query: 174 KDVQAWNLMIAGYLDNGCVGVA-EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+++ +W M AGY NG + + ++F M +RD+ SW +I A F
Sbjct: 120 RNLISWTAMAAGYAQNGYLQESYSEIFSTMPERDVFSWTAMITVYGEFDDPHKARRCFDL 179
Query: 233 MPETCEKTWNSII-SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
MP +W+++ + NG ++ A E+ P ++ SW ++I + + G++ A +
Sbjct: 180 MPHKNVVSWSAMFQAAYAHNGHLESAKIAFERMPSRDVVSWNSIIAFFSQKGKLEEAKDL 239
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F LM + WNVMI ++ + + F M G SPD+ T+ ++ CS +
Sbjct: 240 FHLMPEPNTAAWNVMIQAHAQSGHLDLAMDVFRLMDLHGVSPDSVTYIAIFDACSRIANA 299
Query: 352 DLGRQIHAQAIKIARNQFT-TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
+ G A + Q + V NA +TMY R G A F +P+ D +SWN+++
Sbjct: 300 EEGSAFIASIVHPGILQDSVAVGNAALTMYGRSGLAAGAWSVFQQMPVRDSVSWNAMLTA 359
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
A +G+ E AL++F M L PD ITFV VLSACS+AGL+ + R YF + Y L P
Sbjct: 360 FARNGHGEAALDVFLAMELEGLVPDIITFVNVLSACSHAGLLHRARGYFHSISCDYGLTP 419
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
HY C+ DLL R G + EA L+N + E + W ALLGACR H +++ G A
Sbjct: 420 IYDHYVCLTDLLARSGRLVEAEELVNSM---PFEPNYEAWMALLGACRSHGDVRRGNRAA 476
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
++ + Y++L+ +Y G ++D I M+
Sbjct: 477 GFFVQAGVDAESPYVLLSHLYAEAGSKDDVLVIRKAMR 514
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 220/500 (44%), Gaps = 82/500 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N + E++ LFD+MP+RDT+TWN ++ Y + G L+ A LF MPERD ++NT+I
Sbjct: 10 IQNNAVGESKGLFDRMPERDTITWNSLLSAYAQRGHLEEANDLFYMMPERDYMSWNTLIQ 69
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
S N+ A+E++ M V+W+ M++ Y G +D+ +F MP ++++SW +
Sbjct: 70 A-SASSNLDLAQEIYHYMPEHSHVSWSVMLTAYANFGHLDKTRSLFDSMPERNLISWTAM 128
Query: 121 IGALVNCQRMDLAESY---FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
Q L ESY F M RDV SWT M+ +AR+ FD MP K+V
Sbjct: 129 AAGY--AQNGYLQESYSEIFSTMPERDVFSWTAMITVYGEFDDPHKARRCFDLMPHKNVV 186
Query: 178 AWNLMI-AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
+W+ M A Y NG + A+ F++M RD+ SW +I +++ A F MPE
Sbjct: 187 SWSAMFQAAYAHNGHLESAKIAFERMPSRDVVSWNSIIAFFSQKGKLEEAKDLFHLMPEP 246
Query: 237 CEKTWNSIISVLIRNGLV-----------------------------------KEAHSYL 261
WN +I ++G + +E +++
Sbjct: 247 NTAAWNVMIQAHAQSGHLDLAMDVFRLMDLHGVSPDSVTYIAIFDACSRIANAEEGSAFI 306
Query: 262 EKYPYSNIASWTNVIVG------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
+ I +V VG Y G A VF+ M RD WN M+ N
Sbjct: 307 ASIVHPGILQ-DSVAVGNAALTMYGRSGLAAGAWSVFQQMPVRDSVSWNAMLTAFARNGH 365
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
GE L F+ M+ G PD TF +VL+ CS HA + AR F ++S
Sbjct: 366 GEAALDVFLAMELEGLVPDIITFVNVLSACS-----------HAGLLHRARGYFHSIS-- 412
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
++ PI+D + + LA G +A EL M F+P+
Sbjct: 413 ---------------CDYGLTPIYD--HYVCLTDLLARSGRLVEAEELVNSM---PFEPN 452
Query: 436 DITFVGVLSACSYAGLVDQG 455
++ +L AC G V +G
Sbjct: 453 YEAWMALLGACRSHGDVRRG 472
>gi|345505210|gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
Length = 588
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 176/529 (33%), Positives = 284/529 (53%), Gaps = 23/529 (4%)
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV--NCQRMDLAESY 136
EV D WN++I + +G+ + ++ + L++ VS + +LV C R+ +
Sbjct: 57 EVEDPFLWNAVIKSH-SHGVDPKRALIWFCLMLENGVSVDKFSLSLVLKACSRLGFVQEG 115
Query: 137 FKEMG-ARDVASWT------IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
+ G R W+ ++ ++ G + AR++FD+MP +D ++N MI GY+
Sbjct: 116 MQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKC 175
Query: 190 GCVGVAEDLFQKMHD--RDLTSWKQLINGLVN-SRRIDAAISYFKQMPETCEKTWNSIIS 246
G +G A +LF M ++L SW +I+G S ++ A F +MPE +WNS+I
Sbjct: 176 GLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLID 235
Query: 247 VLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVM 306
+++G +++A P ++ +W +I GY ++G V A +F+ M RDV +N M
Sbjct: 236 GYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSM 295
Query: 307 IFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
+ G +N E L+ F M KES SPD T VL+ + L L +H + I
Sbjct: 296 MAGYVQNKYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMH---LYIV 352
Query: 366 RNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
QF + A+I MY++CG+IQ A+L F + I WN++I GLA HG E A +
Sbjct: 353 EKQFFLGGKLGVALIDMYSKCGSIQQAMLVFERIENKSIDHWNAMIGGLAIHGLGESAFD 412
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
+ + KPDDITFVG+L+ACS++GLV +G F+ M+ K+ ++PR HY C+VD+L
Sbjct: 413 MLLEIERRSIKPDDITFVGILNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDIL 472
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
R G I+ A NL+ E+ +E + +W L AC H + GE+ + ++ N
Sbjct: 473 SRSGSIELAKNLIEEM---PMEPNDVIWRTFLTACSHHKEFETGEVVAKHLILQAGYNPS 529
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
Y++L+ MY S G +DA+R+ MKE ++K PGCSWI+++ H F
Sbjct: 530 SYVLLSNMYASFGMWKDARRVRTMMKERELQKVPGCSWIELDGRVHEFF 578
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 208/420 (49%), Gaps = 32/420 (7%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGLMQSDNVQGAKEVF 75
D + +++++ + GF+ M + + + D+F N +I ++ + A+++F
Sbjct: 95 DKFSLSLVLKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIF 154
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWNLVI-GALVNCQRMDL 132
D M RD V++NSMI GYV GLI A +F MP +K+++SWN +I G +++
Sbjct: 155 DRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNI 214
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A F EM +D+ SW +++G V+ GR+ +A+ LF MP +DV W MI GY G V
Sbjct: 215 ASKLFAEMPEKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFV 274
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSIISV 247
A+ LF +M RD+ ++ ++ G V ++ A+ F M + E T ++S
Sbjct: 275 HKAKTLFDQMPHRDVVAYNSMMAGYVQNKYNMEALEIFSDMEKESHLSPDETTLVIVLSA 334
Query: 248 LIRNGLVKEA---HSYL-EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+ + G + +A H Y+ EK + +I Y + G + A+ VFE + + + W
Sbjct: 335 IAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQQAMLVFERIENKSIDHW 394
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLGRQ 356
N MI GL + LGE ++++ PD+ TF +L CS L +L R+
Sbjct: 395 NAMIGGLAIHGLGESAFDMLLEIERRSIKPDDITFVGILNACSHSGLVKEGLLCFELMRR 454
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYH 414
H ++ M+ + +R G+I+ A L+E + +D+I W + + ++H
Sbjct: 455 KHKIEPRLQH------YGCMVDILSRSGSIELAKNLIEEMPMEPNDVI-WRTFLTACSHH 507
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 192/397 (48%), Gaps = 25/397 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTVIAGLMQ-S 65
A+ +FD+MPQRD+V++N MI GY K G + +A LF+ MP+ +++ ++N++I+G Q S
Sbjct: 150 ARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTS 209
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D V A ++F M +D+++WNS+I GYV +G +++A +F+ MP +DVV+W +I
Sbjct: 210 DGVNIASKLFAEMPEKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYA 269
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP-----AKDVQAWN 180
+ A++ F +M RDV ++ M+ G V+ +EA ++F M + D
Sbjct: 270 KLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNKYNMEALEIFSDMEKESHLSPDETTLV 329
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN----SRRIDAAISYFKQMPET 236
++++ G + A D+ + ++ +L L++ I A+ F+++
Sbjct: 330 IVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQQAMLVFERIENK 389
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF----EMGEVGSAIKVF 292
WN++I L +GL + A L + +I VG G V + F
Sbjct: 390 SIDHWNAMIGGLAIHGLGESAFDMLLEIERRSIKPDDITFVGILNACSHSGLVKEGLLCF 449
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEG-LKFFVQMKESGP-SPDNATFTSVLTICSDLPT 350
ELM + + +G + L G ++ + E P P++ + + LT CS
Sbjct: 450 ELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPMEPNDVIWRTFLTACSHHKE 509
Query: 351 LDLGRQIHAQAIKIA---RNQFTTVSNAMITMYARCG 384
+ G + I A + + +SN MYA G
Sbjct: 510 FETGEVVAKHLILQAGYNPSSYVLLSN----MYASFG 542
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 181/625 (28%), Positives = 332/625 (53%), Gaps = 29/625 (4%)
Query: 11 NLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQG 70
N+ +P +T N ++ Y A +F+ +P+ ++F++N ++ +S ++
Sbjct: 28 NIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKSGHLSE 87
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
+ F+ + RD VTWN +I GY +GL+ A++ ++ M +KD S NL L+ ++
Sbjct: 88 MERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MKDFSS-NLTRVTLMTMLKL 145
Query: 131 DLAESYF---KEMGARDVA----SWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAW 179
+ + K++ + + S+ ++ + L+ + G I +A+K+F + ++ +
Sbjct: 146 SSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMY 205
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----E 235
N ++ G L G + A LF+ M ++D SW +I GL + AI F++M +
Sbjct: 206 NTLMGGLLACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLK 264
Query: 236 TCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSN-IASWTNVIVGYFEMGEVGSAIKV 291
+ + S++ G + ++ H+ + + + I + +I Y + + A V
Sbjct: 265 MDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTV 324
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F+ M ++V W M+ G G+ E +K F+ M+ SG PD+ T ++ C+++ +L
Sbjct: 325 FDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSL 384
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
+ G Q H +AI + TVSN+++T+Y +CG+I + F+ + + D +SW +++
Sbjct: 385 EEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAY 444
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
A G A +A++LF++M KPD +T GV+SACS AGLV++G+ YF+ M N+Y + P
Sbjct: 445 AQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPS 504
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLN--EIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
+ HY+C++DL R G I+EAM +N R D I W LL ACR N+++G+ A
Sbjct: 505 NGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIG-----WTTLLSACRNKGNLEIGKWA 559
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
E ++EL+P++ Y +L+ +Y S G+ + ++ MKE V+KEPG SWI+ H
Sbjct: 560 AESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHS 619
Query: 590 FLSGDSSHPKFHRLRYLLNLLHTEI 614
F + D S P ++ L L+ +I
Sbjct: 620 FSADDESSPYSDQIYAKLEELYQKI 644
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 20/193 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAG 61
I ++ LF++M RD V+W M+ Y + G A+ LF++M + D T VI+
Sbjct: 419 IDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISA 478
Query: 62 LMQSDNVQGAKEVFDGM-----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-DVV 115
++ V+ + F+ M V ++ MI + +G I+EA+ +GMP + D +
Sbjct: 479 CSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAI 538
Query: 116 SWNLVIGALVNCQRMDL----AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
W ++ A N +++ AES E+ A +T++ + +G+ +L M
Sbjct: 539 GWTTLLSACRNKGNLEIGKWAAESLI-ELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGM 597
Query: 172 PAKDV-----QAW 179
K+V Q+W
Sbjct: 598 KEKNVRKEPGQSW 610
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 96/235 (40%), Gaps = 7/235 (2%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+++ + C L + IH I+ + T + N ++ YA + A F +P
Sbjct: 6 YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
++ SWN+++ + G+ + FE++ D +T+ ++ S +GLV
Sbjct: 66 QPNLFSWNNLLLAYSKSGHLSEMERTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVK 121
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
++ M + ++ L G + + ++ G E V LL
Sbjct: 122 AYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL--- 178
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+++ + A + L+ N+ +Y L L+CG EDA ++F M+++ V
Sbjct: 179 DMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSV 233
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 200/656 (30%), Positives = 323/656 (49%), Gaps = 69/656 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+R +QEA + + + + ++ + G L A + M + DMF
Sbjct: 58 LRPLDVQEAMTMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVAT 117
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+++ M+ + A+ +FDGM R+VVTW ++++GY N L VF M
Sbjct: 118 SLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP 177
Query: 117 WNLVIGALVN-----CQRMDLAES---YFKEMGARDVASWTIMVNGL----VREGRIVEA 164
+ +GA +N C +DL + Y + GA + S M N L + G + A
Sbjct: 178 SHYTLGATLNACLASCD-VDLGKQVHGYAIKYGAESITS---MGNSLCSLYAKLGSLDSA 233
Query: 165 RKLFDKMPAKDVQAWNLMIAGYL-DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
+ F ++P K+V W MI+ D CV + LF M L++G+
Sbjct: 234 LRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDM----------LMDGV------ 277
Query: 224 DAAISYFKQMPETCEKTWNSIISVL---IRNGLVKEAHSYLEKYP-YSNIASWTNVIVGY 279
MP E T S++S+ + L K+ ++ K +N+ + + Y
Sbjct: 278 ---------MPN--EFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLY 326
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE------NDL-----GEEGLKFFVQMKE 328
GE A+++FE M + WN MI G + +DL G + L F +K
Sbjct: 327 LRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKR 386
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
S PD TF+S+L++CS + L+ G QIHAQ IK V++A++ MY +CG IQ
Sbjct: 387 SVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQD 446
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F +P ++W S+I G + HG ++A++LFE MRL +P++ITFV +LSACSY
Sbjct: 447 ANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSY 506
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
AGLV++ +YFD MK +Y ++P HY C++D+ R G +++A + I+ G E +
Sbjct: 507 AGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF---IKRTGFEPNEA 563
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+W +L+ CR H N+++ A ++++EL+P Y++L MY+S R +D R+ MK
Sbjct: 564 IWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMK 623
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL-NLLHTEIEREILFDAY 623
+ V SWI I D + F + D +HP+ L LL NLL E + I ++ Y
Sbjct: 624 QEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLL--EKAKAIGYEPY 677
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 193/641 (30%), Positives = 307/641 (47%), Gaps = 41/641 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ +A F M +R++V+W I G +N M LF QM + A +S
Sbjct: 202 LDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRS 261
Query: 66 D------------NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+ K VF D V +++ Y G + +A R F G+P +
Sbjct: 262 CAAMPCLSTARQLHAHAIKNVFSS----DRVVGTAIVDVYAKAGNLVDARRAFIGLPHHN 317
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
V + N ++ LV A F+ M V I ++G+ E + F +
Sbjct: 318 VETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSA--CAEVKGYFQGLQV 375
Query: 174 K----------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
DV N ++ Y + A +FQ+M RD SW +I L +
Sbjct: 376 HCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECY 435
Query: 224 DAAISYFKQM----PETCEKTWNSIISVL-----IRNGLVKEAHSYLEKYPYSNIASWTN 274
+ I++ +M E + T+ S++ + GLV + S T
Sbjct: 436 EDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSST- 494
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
V+ Y + G + A K+ + + +++ WN +I G EE +FF +M + G PD
Sbjct: 495 VVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPD 554
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ T+ +VL C++L T++LG+QIH Q IK +S+ ++ MYA+CGN+ +LL F
Sbjct: 555 HFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFE 614
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
D +SWN++ICG A HG +ALE+FERM+ + P+ TFV VL ACS+ GL+D
Sbjct: 615 KARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDD 674
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
G YF M ++Y L P+ H+ C+VD+LGR EA+ IR+ IE VW LL
Sbjct: 675 GCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEF---IRSMPIEADAVVWKTLL 731
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
C+I +++V E A V+ L+P+++ VY++L+ +Y G+ D R M++ ++K
Sbjct: 732 SICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRK 791
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
EPGCSWI++ H FL GD HP+ + +LN L E++
Sbjct: 792 EPGCSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMK 832
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 143/576 (24%), Positives = 242/576 (42%), Gaps = 60/576 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R A +FD MP RDTV+WN M+ Y G D A LF MP+ D+ ++NT+I+G
Sbjct: 66 RCGGTAHAHGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISG 125
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYV--CNGLIDEALRV-FHGMPLK-----D 113
Q + + + M R V + ++ + C GL D AL V H + +K D
Sbjct: 126 YCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETD 185
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
V + + ++ C+ +D A +F MG R+ SW + G V+ + +LF +M
Sbjct: 186 VRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQR 245
Query: 174 KDVQAWNLMIAGYLDN----GCVGVAEDL----FQKMHDRDLTSWKQLINGLVNSRRIDA 225
+ A + C+ A L + + D +++ + +
Sbjct: 246 LGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVD 305
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----------SWTNV 275
A F +P +T N+++ L+R GL EA + S + S
Sbjct: 306 ARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAE 365
Query: 276 IVGYFEMGEVGS-AIK----------------------------VFELMTTRDVTVWNVM 306
+ GYF+ +V A+K VF+ M RD WN +
Sbjct: 366 VKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAI 425
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
I L +N+ E+ + +M SG PD+ T+ SVL C+ L +L+ G +H +AIK
Sbjct: 426 IAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGL 485
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
VS+ ++ MY +CG I A + +++SWNSII G + +E+A F
Sbjct: 486 GLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSE 545
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
M KPD T+ VL C+ ++ G+ + + L T +VD+ + G
Sbjct: 546 MLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISST-LVDMYAKCG 604
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
+ +++ + + R ++ W A++ +H
Sbjct: 605 NMPDSLLMFEKAR----KLDFVSWNAMICGYALHGQ 636
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 135/570 (23%), Positives = 226/570 (39%), Gaps = 59/570 (10%)
Query: 53 FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
F N ++ + A VFD M RD V+WN+M++ YV G D A +F MP
Sbjct: 55 FVSNCLLQMYARCGGTAHAHGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDP 114
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
DVVSWN +I + EM R VA + L++ ++ L ++
Sbjct: 115 DVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIH 174
Query: 173 A--------KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
A DV+A + ++ Y + A F M +R+ SW I G V + +
Sbjct: 175 ALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYT 234
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRN-------GLVKEAHSYLEKYPYSNIASWTNVIV 277
+ F QM + R+ ++ H++ K +S+ IV
Sbjct: 235 RGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIV 294
Query: 278 G-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A + F + +V N M+ GL LG E ++ F M SG D
Sbjct: 295 DVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVI 354
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
+ + V + C+++ G Q+H A+K + V NA++ +Y +C + A L F +
Sbjct: 355 SLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEM 414
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS-----YAGL 451
D +SWN+II L + E + M + +PDD T+ VL AC+ GL
Sbjct: 415 EQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGL 474
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD---------- 501
V G+ + F+ + VVD+ + G I EA L + I
Sbjct: 475 VVHGKAIKSGLGLDAFVS------STVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIIS 528
Query: 502 ---------------------GIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPN 539
G++ + +L C I++G +I G+ + +
Sbjct: 529 GFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLG 588
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
+ + L +MY CG D+ +F + ++
Sbjct: 589 DEYISSTLVDMYAKCGNMPDSLLMFEKARK 618
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 90/238 (37%), Gaps = 43/238 (18%)
Query: 335 NATFTSVLTICSDL--PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
ATF+ + +C+ L G+ HA+ + T VSN ++ MYARCG A
Sbjct: 17 TATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGV 76
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F ++P D +SWN+++ + G + A LF M PD
Sbjct: 77 FDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTM------PD----------------- 113
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
P + ++ + G+ ++ L E+ G+ + T
Sbjct: 114 -----------------PDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAV 156
Query: 513 LLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
LL +C +++ +G +I V + L +MY C +DA R F M E
Sbjct: 157 LLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGE 214
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 204/636 (32%), Positives = 323/636 (50%), Gaps = 48/636 (7%)
Query: 2 RNARIQEAQNLFDKM---P--QRDTVTWNVMIR--GYFKNGFLDNAM--CLFNQMPERDM 52
RN EA LFDK+ P + D+ T+ +++ G + L + CL + D+
Sbjct: 82 RNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDI 141
Query: 53 FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++++ + + + A ++FD M +DV WN++IS Y +G +EALR F GM +
Sbjct: 142 VVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYF-GMMRR 200
Query: 113 -----DVVSWNLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVE 163
D V+ I + +D KE+ G R D +V+ + G++
Sbjct: 201 FGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEM 260
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
A ++F++MP K V AWN MI GY G LF++M+ +
Sbjct: 261 AIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLT------TLTST 314
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMG 283
A S Q+ E + +IRN + +I ++++ YF+ G
Sbjct: 315 LMACSQSAQLLEG-----KFVHGYIIRNRI------------QPDIFLNSSLMDLYFKCG 357
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
+V SA +F+LM WNVMI G + L+ F +M +S PD TFTSVL
Sbjct: 358 KVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLA 417
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
CS L L+ GR+IH ++ V A++ MYA+CG ++ A F +P D++S
Sbjct: 418 ACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVS 477
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
W S+I HG +ALELF M ++ KPD +TF+ +LSACS+AGLVD G Y+F+ M
Sbjct: 478 WTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMI 537
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL--NEIRADGIEVSPTVWGALLGACRIHN 521
N Y + PR HY+C++ LLGR G + EA +L N +D ++ T L ACR+H
Sbjct: 538 NVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLST----LFSACRLHK 593
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
N+ +G E +++ +P++S Y+IL+ MY S G+ ++ + + ++MK+ G+KK PGCSWI
Sbjct: 594 NLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWI 653
Query: 582 QINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
+IN+ F D+SH + +L+ L + +E E
Sbjct: 654 EINEKIVPFFVEDNSHYHLEGIGNILSYLTSHMEDE 689
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 190/647 (29%), Positives = 331/647 (51%), Gaps = 81/647 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF-------NQMP------ 48
++ R+ A+ +FDKMP ++ +TW+ M+ Y + G+ + A+ +F + P
Sbjct: 96 KSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLA 155
Query: 49 ---------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
++D++ ++I ++ N++ A+ VFD + +
Sbjct: 156 SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK 215
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDLAE------ 134
VTW ++I+GY G +L +F M +VV V+ ++++ C ++ E
Sbjct: 216 TAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIH 275
Query: 135 SYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+Y G DV+ ++++ + R+ RKLFD+M K++ +W MI+GY+ N
Sbjct: 276 AYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDW 335
Query: 194 VAEDLFQKMHDRDLTSWKQ---LINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
A LF +M + WK ++ S A+ +Q+ K N ++
Sbjct: 336 EAMKLFGEM---NRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKA-NLESDEFVK 391
Query: 251 NGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
NGL+ + Y SN+ + A KVF++M ++V +N MI G
Sbjct: 392 NGLI-------DMYAKSNL---------------LIDAKKVFDVMAEQNVISYNAMIEGY 429
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+ E L+ F +M+ P+ TF +++T S+L +L G+Q H Q +K+ +
Sbjct: 430 SSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCP 489
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
V+NA++ MYA+CG+I+ A F+S D++ WNS+I A HG AE+AL +F M
Sbjct: 490 FVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKE 549
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
+P+ +TFV VLSACS+AG V+ G +F+ M + ++P + HY CVV LLGR G + E
Sbjct: 550 GIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFE 608
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
A + ++ IE + VW +LL ACRI N+++G+ A E + +P +SG Y++L+ +
Sbjct: 609 AKEFIEKM---PIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNI 665
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
+ S G D K++ +M + V KEPG SWI++N+ +VF++ D++H
Sbjct: 666 FASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTH 712
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 144/544 (26%), Positives = 247/544 (45%), Gaps = 50/544 (9%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+ D F N +I +SD V A+ VFD M ++++TW+SM+S Y G +EAL VF
Sbjct: 81 QSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVD 140
Query: 109 MPLKDVVSWN-LVIGALVN-CQRMDLAESYFKEMG-------ARDVASWTIMVNGLVREG 159
+ K N V+ +++ C ++ + E + G +DV T +++ + G
Sbjct: 141 LQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNG 200
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
I EAR +FD++ K W +IAGY G V+ +LF +M + ++ + +++ ++
Sbjct: 201 NIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVL- 259
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
+A S + + G K+ H+Y+ + S NV++ +
Sbjct: 260 -----SACSMLE----------------FLEGG--KQIHAYVLRRGTEMDVSVVNVLIDF 296
Query: 280 F-EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ + V + K+F+ M +++ W MI G +N E +K F +M G PD
Sbjct: 297 YTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFAC 356
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
TSVLT C L+ GRQ+HA IK V N +I MYA+ + A F +
Sbjct: 357 TSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAE 416
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
++IS+N++I G + +ALELF MR+ KP++ TF +++A S + G+ +
Sbjct: 417 QNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQF 476
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
+ + K L +VD+ + G I+EA + N I W +++
Sbjct: 477 HNQLV-KMGLDFCPFVTNALVDMYAKCGSIEEARKMFN----SSIWRDVVCWNSMISTHA 531
Query: 519 IHNNIKVGEIAGERVME--LEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKENGVK 573
H + +M+ ++PN Y+ + +C GR ED F M G+K
Sbjct: 532 QHGEAEEALGMFREMMKEGIQPN----YVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIK 587
Query: 574 KEPG 577
PG
Sbjct: 588 --PG 589
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 109/264 (41%), Gaps = 48/264 (18%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P F ++L + + + IH Q I T ++N +I + ++ + +A +
Sbjct: 47 PKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVV 106
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELF-ERMRLTDFKPDDITFVGVLSACSYAGL 451
F +P ++I+W+S++ + GY+E+AL +F + R + P++ V+ AC+ G+
Sbjct: 107 FDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGV 166
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
V++G + F Q T ++D + G I+EA + +++ E + W
Sbjct: 167 VEKGAQLHGFVVRSGFDQDVYVG-TSLIDFYSKNGNIEEARLVFDQLS----EKTAVTWT 221
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
+ IAG Y CGR + +FAQM+E
Sbjct: 222 TI--------------IAG--------------------YTKCGRSAVSLELFAQMRETN 247
Query: 572 VKKE--------PGCSWIQINDGG 587
V + CS ++ +GG
Sbjct: 248 VVPDRYVVSSVLSACSMLEFLEGG 271
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 163/526 (30%), Positives = 272/526 (51%), Gaps = 46/526 (8%)
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A F +M RDV SW M++ + G + + R +FD+M D ++N +IAG+ NGC
Sbjct: 77 ARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCS 136
Query: 193 GVAEDLFQKMHDRDLTS---------------------------------------WKQL 213
A + F +M + S W L
Sbjct: 137 SQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNAL 196
Query: 214 INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI---- 269
N +D A F +M +WNS+IS ++NG + + S +
Sbjct: 197 TNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQ 256
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
+ +N++ YF+ G + A K F + +D W M+ G +N E+ L F +M
Sbjct: 257 VTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLE 316
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
PDN T +SV++ C+ L +L G+ +H +A+ + VS+A++ MY++CG A
Sbjct: 317 NVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADA 376
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
+ F + ++ISWNS+I G A +G +AL L+E M + KPD+ITFVGVLSAC +A
Sbjct: 377 WIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHA 436
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
GLV++G+ YF + + + P HY+C+++LLGR G +D+A++L I++ E + +
Sbjct: 437 GLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDL---IKSMTFEPNCLI 493
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
W LL CRI+ ++ GE+A + EL+P+N+G Y++L+ +Y +CGR +D + + MK
Sbjct: 494 WSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKN 553
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
N +KK SWI+I++ H F++ D +H + ++ LN L +++
Sbjct: 554 NKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQ 599
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 219/506 (43%), Gaps = 93/506 (18%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
R+Q +L P DT N ++ Y K+G L +A LF++M RD+F++N +++ +
Sbjct: 43 RLQTHMDLHLYQPT-DTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSK 101
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGA 123
S NV+ + VFD M V D V++N++I+G+ NG +AL F M + S + +
Sbjct: 102 SGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSV 161
Query: 124 LVNC-QRMDLAESYFKEMGARDVAS--------WTIMVNGLVREGRIVEARKLFDKMPAK 174
L C Q +D+ K++ R VA+ W + N + G + +AR LFD+M K
Sbjct: 162 LHACSQLLDIKRG--KQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNK 219
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYF 230
+V +WN MI+GYL NG LF +M D + +++ ID A F
Sbjct: 220 NVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTF 279
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYL------------EKYPYSNIASWT----- 273
+++ E + W +++ +NG KE + L + + S++ S
Sbjct: 280 REIKEKDKVCWTTMMVGCAQNG--KEEDALLLFREMLLENVRPDNFTISSVVSSCARLAS 337
Query: 274 ----------NVIVG--------------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
VI G Y + GE A VF+ M TR+V WN MI G
Sbjct: 338 LCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILG 397
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
+N E L + +M PDN TF VL+ C +HA ++ + F
Sbjct: 398 YAQNGKDLEALALYEEMLHENLKPDNITFVGVLSAC-----------MHAGLVERGQGYF 446
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
++S P D ++ +I L GY +KA++L + M
Sbjct: 447 YSISKI-----------------HGMNPTFD--HYSCMINLLGRAGYMDKAVDLIKSM-- 485
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQG 455
F+P+ + + +LS C V+ G
Sbjct: 486 -TFEPNCLIWSTLLSVCRINCDVNNG 510
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 196/699 (28%), Positives = 341/699 (48%), Gaps = 97/699 (13%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------------------- 47
++A ++ +++ V WN+++R + K G LD A+ + +M
Sbjct: 100 KDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKAC 159
Query: 48 ---P-----------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGME---VRDVV 84
P E ++F N ++A + +++ A VFD + + DV+
Sbjct: 160 GELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVI 219
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPL----------KDVVSWNLVIGALVNCQRMDLAE 134
+WNS+++ +V AL +F M + D++S ++ L C + A
Sbjct: 220 SWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIIS---IVNILPACASLK-AL 275
Query: 135 SYFKEMGARDVASWTI--------MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
KE+ + + + T +++ + G + +A K+F+ M KDV +WN M+ GY
Sbjct: 276 PQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGY 335
Query: 187 LDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTW 241
+G G A +LF+ M D+ +W +I G A+ F+QM + E
Sbjct: 336 TQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNS 395
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYS-------------------NIASWTNVIVGYFEM 282
+IIS+L + +E + YS ++ + +I Y +
Sbjct: 396 VTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKC 455
Query: 283 GEVGSAIKVFELMTTRD--VTVWNVMIFGLGENDLGEEGLKFFVQM--KESGPSPDNATF 338
+A +F+ + R+ V W VMI G + + LK F +M K +P+ T
Sbjct: 456 RSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTI 515
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT--VSNAMITMYARCGNIQSALLEFSSV 396
+ +L C+ L L +G+QIHA + + + V+N +I MY++CG++ +A F S+
Sbjct: 516 SCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSM 575
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
P + +SW S++ G HG ++AL++F++M+ F PDDI+F+ +L ACS++G+VDQG
Sbjct: 576 PKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGL 635
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
YFD M+ Y + + HY CV+DLL R G +D+A + E+ +E S +W ALL A
Sbjct: 636 NYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEM---PMEPSAVIWVALLSA 692
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
CR+H+N+++ E A +++ ++ N G Y +++ +Y + R +D RI MK++G+KK P
Sbjct: 693 CRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRP 752
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
GCSW+Q G F GD SHP + LL L I+
Sbjct: 753 GCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIK 791
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 177/450 (39%), Gaps = 92/450 (20%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+ +A +F+ M +D V+WN M+ GY ++G A LF M + D+ T++ VIAG
Sbjct: 310 MNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAG 369
Query: 62 LMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD--- 113
Q Q A + F DG E + VT S++S G + + + + H LK
Sbjct: 370 YAQRGCSQEALDAFQQMILDGSE-PNSVTIISLLSACASLGALSQGMEI-HAYSLKKCLL 427
Query: 114 --------------VVSWNLVIGALVNCQRMDLAESYFKEMG--ARDVASWTIMVNGLVR 157
++ +N +I C+ A S F + R+V +WT+M+ G +
Sbjct: 428 SLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQ 487
Query: 158 EGRIVEARKLFDKMPAKDVQ-AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
G +A K+F +M +K A N + C +A
Sbjct: 488 YGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLA--------------------A 527
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVI 276
L ++I A ++ + + N +I + + G V A + + P N SWT+++
Sbjct: 528 LRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMM 587
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
GY G + G+E L F +M+++G PD+
Sbjct: 588 SGY-------------------------------GMHGRGKEALDIFDKMQKAGFVPDDI 616
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA-----MITMYARCGNIQSALL 391
+F +L CS +D G I R + V++A +I + ARCG + A
Sbjct: 617 SFLVLLYACSHSGMVDQGLNY----FDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWK 672
Query: 392 EFSSVPIH-DIISWNSIICGLAYHGYAEKA 420
+P+ + W +++ H E A
Sbjct: 673 TIQEMPMEPSAVIWVALLSACRVHSNVELA 702
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 115/255 (45%), Gaps = 27/255 (10%)
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
+HSY+ S + T V+ Y G A+ V E +T WN+++ +
Sbjct: 76 SHSYV-----SPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHL 130
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VS 373
+ + +M +G PD+ T L C +LP+ GR +H I N F + V
Sbjct: 131 DRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGL---ICCNGFESNVFVC 187
Query: 374 NAMITMYARCGNIQSALLEFSSVP---IHDIISWNSIICGLAYHGYAEKALELFERMRL- 429
NA++ MY+RCG+++ A L F + I D+ISWNSI+ ALELF M +
Sbjct: 188 NALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMI 247
Query: 430 -----TDFKPDDITFVGVLSAC-SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC--VVDL 481
T+ + D I+ V +L AC S L + ++N F + C ++D
Sbjct: 248 VHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADA----FVCNALIDT 303
Query: 482 LGRFGLIDEAMNLLN 496
+ G +++A+ + N
Sbjct: 304 YAKCGSMNDAVKVFN 318
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+ A+N+FD MP+R+ V+W M+ GY +G A+ +F++M + D ++ ++
Sbjct: 565 VDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYA 624
Query: 62 LMQSDNVQGAKEVFDGMEVR-DVVT----WNSMISGYVCNGLIDEALRVFHGMPLK-DVV 115
S V FD M DVV + +I G +D+A + MP++ V
Sbjct: 625 CSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAV 684
Query: 116 SWNLVIGALVNCQRMDLAESYFKE---MGARDVASWTIMVNGLVREGR---IVEARKLFD 169
W ++ A ++LAE + M A + S+T++ N R + R+L
Sbjct: 685 IWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMK 744
Query: 170 K 170
K
Sbjct: 745 K 745
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 185/606 (30%), Positives = 310/606 (51%), Gaps = 31/606 (5%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI 59
+++ A+ +F+ + +R+ V WN M+ G+ +NG M F+ M P+ D FT+ ++
Sbjct: 358 SKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIF 417
Query: 60 AGLMQSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+ + ++ M ++ N+++ Y +G + EA + F M + D V
Sbjct: 418 SACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNV 477
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
SWN +I V + D A F+ M + V + + +V V+ K +
Sbjct: 478 SWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLL 537
Query: 176 VQ--------AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
V+ A + +I Y+ G V A D+F M R++ S LI G S ++ AI
Sbjct: 538 VKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSH-LEEAI 596
Query: 228 SYFKQMPETCEKTWNSIISVLIRN-------GLVKEAHSYLEKYPY--SNIASWTNVIVG 278
F+++ K + L+ L ++ H + K+ + S+ +++
Sbjct: 597 HLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCM 656
Query: 279 YFEMGEVGSAIKVF-ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + +F EL + + VW +I G + + E+ L+F+ M+ PD AT
Sbjct: 657 YMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAT 716
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F SVL C+ + +L G+++H+ N +++I MYA+CG+++ +L F +P
Sbjct: 717 FASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMP 776
Query: 398 IHD-IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+ +ISWNS+I GLA +GYAE+ALE+F++M PD++TF+GVLSACS+AG V +GR
Sbjct: 777 RRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGR 836
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
FD M N Y LQPR H C+VD+LGR+G ++EA +N++ G + P +W LLGA
Sbjct: 837 KVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKL---GCKADPMLWSTLLGA 893
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
CR H + G+ A ++MEL+P +S Y++L+ +Y A + +MK GVKK P
Sbjct: 894 CRKHGDEVRGKRAANKLMELKPQSSSSYVLLSGLYAESENWSGADSLRREMKLKGVKKLP 953
Query: 577 GCSWIQ 582
G SWI+
Sbjct: 954 GYSWIE 959
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 155/612 (25%), Positives = 280/612 (45%), Gaps = 84/612 (13%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGF----LDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
AQ F ++ ++D WN ++ Y +G + + +C++N + FT+ V++
Sbjct: 95 AQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSG 154
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
++ K+V G V + GLID
Sbjct: 155 LQDINYGKQVHCG-----VFKMGFGFRSFCQGGLID----------------------MY 187
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP----AKDVQAWN 180
C+ + A F D SWT ++ G VR+G +EA K+FDKM D A
Sbjct: 188 AKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALV 247
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK- 239
+I Y+ G + A LF ++ + ++ +W +I+G + AIS+F ++ +T K
Sbjct: 248 TVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKA 307
Query: 240 TWNSIISVL--------IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
T +S+ SVL + G + A + E N+ + ++ Y + ++ +A +V
Sbjct: 308 TRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLD-DNVYVGSALVNMYAKCSKMDAAKQV 366
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F + R++ +WN M+ G +N L +E ++FF MK GP PD TFTS+ + C+ L L
Sbjct: 367 FNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYL 426
Query: 352 DLGRQIHAQAIKIARNQFTT---VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
D G Q+H IK N+FT+ V+NA++ MYA+ G ++ A +F + IHD +SWN+II
Sbjct: 427 DFGGQLHTVMIK---NKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAII 483
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
G Y ++A +F RM PD+++ ++SAC+ QG+ C+ K L
Sbjct: 484 VGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQC-HCLLVKVGL 542
Query: 469 QPRSAHYTCVVDLLGRFGLI------------------------------DEAMNLLNEI 498
+ + ++D+ + G++ +EA++L EI
Sbjct: 543 DTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHLEEAIHLFQEI 602
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYLILTEMYLSCGR 556
+ G++ + + LL C + +G +VM+ ++ V + L MY++ R
Sbjct: 603 QMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQR 662
Query: 557 REDAKRIFAQMK 568
D++ +F++++
Sbjct: 663 FADSETLFSELQ 674
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/624 (23%), Positives = 270/624 (43%), Gaps = 97/624 (15%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNT 57
RN R +A+ +FD DTV+W +I GY ++GF A+ +F++M D T
Sbjct: 191 RNLR--DARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVT 248
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF----------- 106
VI + + A+++F + +VV WN MISG+ G +EA+ F
Sbjct: 249 VINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKAT 308
Query: 107 ---HGMPLKDVVSWNLV-IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIV 162
G L + S +++ G++V+ Q + KE +V + +VN + ++
Sbjct: 309 RSSLGSVLSAIASLSMLNYGSMVHAQAI-------KEGLDDNVYVGSALVNMYAKCSKMD 361
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
A+++F+ + +++ WN M+ G+ NG + F M
Sbjct: 362 AAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMK------------------- 402
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVK---EAHSYLEKYPYSNIASWTNVIVG- 278
+ P+ E T+ SI S + + H+ + K +++ N +V
Sbjct: 403 --------RHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDM 454
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G + A K FE M D WN +I G + + +E F +M +G PD +
Sbjct: 455 YAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSL 514
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
S+++ C+++ G+Q H +K+ + T +++I MY +CG + +A F S+P
Sbjct: 515 ASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPY 574
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
+++S N++I G + E+A+ LF+ +++ KP ++TF G+L C A +++ GR
Sbjct: 575 RNVVSINALIAGYTM-SHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQI 633
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLL-----GRF--------------GLI----------- 488
+ FL S+ CV L RF GL+
Sbjct: 634 HGQVMKWGFLS--SSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQ 691
Query: 489 ----DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
++A+ +R+D I + ++L AC ++++ G+ + N +
Sbjct: 692 QNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEIT 751
Query: 545 L-ILTEMYLSCGRREDAKRIFAQM 567
L +MY CG + + ++F +M
Sbjct: 752 CSSLIDMYAKCGDVKGSLQVFHEM 775
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 143/301 (47%), Gaps = 7/301 (2%)
Query: 274 NVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
NVIV Y + G V A K F + +DV WN ++ ++ L ++ FV M G
Sbjct: 80 NVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVR 139
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P+ TF VL+ CS L ++ G+Q+H K+ + +I MYA+C N++ A L
Sbjct: 140 PNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLV 199
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F D +SW ++I G G+ +A+++F++M+ PD I V V++A G +
Sbjct: 200 FDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRL 259
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
R F + N P + ++ + G +EA++ E++ G++ + + G+
Sbjct: 260 ADARKLFTQIPN-----PNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGS 314
Query: 513 LLGACRIHNNIKVGE-IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
+L A + + G + + + E +N V L MY C + + AK++F + E
Sbjct: 315 VLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERN 374
Query: 572 V 572
+
Sbjct: 375 I 375
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 174/389 (44%), Gaps = 40/389 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
++ ++EA+ F+ M D V+WN +I GY + + D A +F +M + +A
Sbjct: 457 KSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLAS 516
Query: 62 LMQSDNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
++ + KE G + +S+I YV G++ A VF+ MP
Sbjct: 517 IVSA--CANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPY 574
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGL---------VREGRIV 162
++VVS N +I ++ A F+E+ + + GL + GR +
Sbjct: 575 RNVVSINALIAGYT-MSHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQI 633
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM-HDRDLTSWKQLINGLVNSR 221
+ + + ++ Y+++ +E LF ++ + + L W LI+G
Sbjct: 634 HGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQN 693
Query: 222 RIDAAISYFKQM------PETCEKTWNSIISVL-----IRNGLVKEAHSYLEKYPYS-NI 269
+ A+ +++ M P+ + T+ S++ ++ G +E HS + ++ +
Sbjct: 694 HHEKALQFYQHMRSDNILPD--QATFASVLRACAGMSSLQTG--QEVHSLIFHTGFNMDE 749
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRD-VTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ +++I Y + G+V +++VF M R+ V WN MI GL +N EE L+ F QM++
Sbjct: 750 ITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQ 809
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQI 357
PD TF VL+ CS + GR++
Sbjct: 810 QSIIPDEVTFLGVLSACSHAGRVSEGRKV 838
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 18/232 (7%)
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
L L + IH++++KI + N ++ +Y +CGN+ A FS + D+ +WNS+
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
+ HG ++ F M +P++ TF VLSACS ++ G+ C K
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGK-QVHCGVFKMG 172
Query: 468 LQPRSAHYTCVVDLLGRF-GLIDEAMNLLNEIRADGIEVSPTVWGAL-----LGACRIHN 521
RS ++D+ + L D + + D + + + G + + A ++ +
Sbjct: 173 FGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFD 232
Query: 522 NI-KVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ +VG + + + + + Y++ GR DA+++F Q+ V
Sbjct: 233 KMQRVGHVPDQIAL----------VTVINAYVALGRLADARKLFTQIPNPNV 274
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 189/629 (30%), Positives = 330/629 (52%), Gaps = 38/629 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYN 56
+++ I +A+ +FD +++ V WN ++ G+ +N + + +F M D+ FT+
Sbjct: 370 VKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFV 429
Query: 57 TVIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+V+ + ++ ++V +GM+ D+ N+M+ Y G ID A +F +P+
Sbjct: 430 SVLGACINLYSLDLGRQVHCITIKNGMDA-DLFVANAMLDMYSKLGAIDVAKALFSLIPV 488
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMG----ARDVASWTIMVNGL-----VREGRIV 162
KD VSWN +I L + + A + K M A D S+ +N + G+ +
Sbjct: 489 KDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQI 548
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ + + + +L I Y G V + + + + LI GLV + R
Sbjct: 549 HSASIKYNVCSNHAVGSSL-IDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNR 607
Query: 223 IDAAISYFKQMPETCEK----TWNSIISVLIR---NGLVKEAHSYLEKYPYSNIASWTNV 275
D AI F+Q+ + K T+ SI+S R + + K+ H Y K N + +
Sbjct: 608 EDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGI 667
Query: 276 -IVG-YFEMGEVGSAIKVFE-LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+VG Y + + A K+ E + +++ W I G +N + L F +M+
Sbjct: 668 SLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVR 727
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
D ATFTSVL CS++ L G++IH +K + T ++A++ MY++CG++ S+
Sbjct: 728 SDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEI 787
Query: 393 FSSVP-IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F + +I+ WNS+I G A +GYA +AL LF++M+ + KPDD+T +GVL ACS+AGL
Sbjct: 788 FKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGL 847
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI--RADGIEVSPTV 509
+ +G ++FD M Y + PR HY C++DLLGR G + +A +++++ RADG+ +
Sbjct: 848 ISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGV-----I 902
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
W L AC++H + + G++A ++++E+EP +S Y+ L+ ++ + G +AK M+E
Sbjct: 903 WATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMRE 962
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
GV K PGCSWI + + VF+ D+ HP
Sbjct: 963 KGVMKFPGCSWITVGNKQSVFVVQDTHHP 991
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/523 (24%), Positives = 236/523 (45%), Gaps = 69/523 (13%)
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM----GARD 144
++ Y G +D+A R+F G+ D + W +I R A + F M D
Sbjct: 198 LVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPD 257
Query: 145 VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD 204
+ +++ L GR+ +AR L ++ AWN +IA Y +G L++ M
Sbjct: 258 QVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKK 317
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
+ L + ++++ A +Q+ T +++GL
Sbjct: 318 QGLMPTRSTFASILSAAANMTAFDEGRQIHATA-----------VKHGL----------- 355
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
+N+ +++I Y + G + A KVF+ T +++ +WN +++G +N+L EE ++ F
Sbjct: 356 -DANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQ 414
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
M+ + D+ TF SVL C +L +LDLGRQ+H IK + V+NAM+ MY++ G
Sbjct: 415 YMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLG 474
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
I A FS +P+ D +SWN++I GLA++ +A+ + +RM+ D+++F ++
Sbjct: 475 AIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAIN 534
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI---------------- 488
ACS ++ G+ KY + A + ++DL +FG +
Sbjct: 535 ACSNIWAIETGKQIHSA-SIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIV 593
Query: 489 ---------------DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV 533
DEA+ L ++ DG + S + ++L C V + G++V
Sbjct: 594 PINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGC----TRPVSSVIGKQV 649
Query: 534 M------ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
+ ++ + + L +YL C EDA ++ ++ ++
Sbjct: 650 HCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDH 692
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/590 (23%), Positives = 261/590 (44%), Gaps = 93/590 (15%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ + +A+ +FD + DT+ W MI GY + G A+ LF++M + D T T
Sbjct: 204 KCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVT 263
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-- 115
+I+ L + A+ + + + V WN++I+ Y +GL E ++ M + ++
Sbjct: 264 IISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPT 323
Query: 116 --SWNLVIGALVNCQRMD----LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
++ ++ A N D + + K +V + ++N V+ G I +A+K+FD
Sbjct: 324 RSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFD 383
Query: 170 KMPAKDVQAWNLMIAGYLDN------------------------------GCVGV-AEDL 198
K++ WN ++ G++ N C+ + + DL
Sbjct: 384 FSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDL 443
Query: 199 FQKMH--------DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
+++H D DL +++ ID A + F +P +WN++I L
Sbjct: 444 GRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAH 503
Query: 251 N----------------GLV----------------------KEAHSYLEKYPY-SNIAS 271
N G+ K+ HS KY SN A
Sbjct: 504 NEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAV 563
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
+++I Y + G+V S+ KV + + N +I GL +N+ +E ++ F Q+ + G
Sbjct: 564 GSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGF 623
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA-RNQFTTVSNAMITMYARCGNIQSAL 390
P N TFTS+L+ C+ + +G+Q+H +K A NQ T++ +++ +Y +C ++ A
Sbjct: 624 KPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDAN 683
Query: 391 LEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
VP H +++ W + I G A +GY+ ++L +F RMR D + D+ TF VL ACS
Sbjct: 684 KLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEM 743
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+ G+ + F+ +A + ++D+ + G + + + E++
Sbjct: 744 AALTDGKEIHGLIVKSGFVSYETA-TSALMDMYSKCGDVISSFEIFKELK 792
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 207/438 (47%), Gaps = 22/438 (5%)
Query: 31 YFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME----VRDVVTW 86
Y K G +D+A +F+ + D + ++IAG + Q A +F ME V D VT
Sbjct: 202 YAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTC 261
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV- 145
++IS G + +A + + + V+WN VI + +K+M + +
Sbjct: 262 VTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLM 321
Query: 146 ---ASWTIMVNGLVR-----EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+++ +++ EGR + A + + A +V + +I Y+ +GC+ A+
Sbjct: 322 PTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDA-NVFVGSSLINLYVKHGCISDAKK 380
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLI---R 250
+F ++++ W ++ G V + + I F+ M E + T+ S++ I
Sbjct: 381 VFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYS 440
Query: 251 NGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
L ++ H K N ++ Y ++G + A +F L+ +D WN +I G
Sbjct: 441 LDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVG 500
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
L N+ E + +MK G + D +F + + CS++ ++ G+QIH+ +IK
Sbjct: 501 LAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSN 560
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
V +++I +Y++ G+++S+ + V I+ N++I GL + ++A+ELF+++
Sbjct: 561 HAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLK 620
Query: 430 TDFKPDDITFVGVLSACS 447
FKP + TF +LS C+
Sbjct: 621 DGFKPSNFTFTSILSGCT 638
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 6/236 (2%)
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G +PD VL+ CS L L+ GRQ+H +K ++ MYA+CG + A
Sbjct: 152 GSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDA 211
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F + D I W S+I G G ++AL LF RM PD +T V ++S +
Sbjct: 212 RRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASM 271
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
G + R K + + V+ + GL E L +++ G+ + +
Sbjct: 272 GRLGDARTLL-----KRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRST 326
Query: 510 WGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ ++L A G +I V N V L +Y+ G DAK++F
Sbjct: 327 FASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVF 382
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 287/534 (53%), Gaps = 29/534 (5%)
Query: 77 GMEVRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVNCQRMD 131
G + D WN++I + AL +F +G+ + D S +LV+ A C R+
Sbjct: 84 GGDXEDXYLWNAVIKSHSHGTDPRRALLLFCLMLENGVSV-DKFSLSLVLKA---CSRLG 139
Query: 132 LAES------YFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
L + + K+ G D+ ++ ++ G + AR++FD+MP +D ++N MI
Sbjct: 140 LVKEGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMID 199
Query: 185 GYLDNGCVGVAEDLFQKMHD--RDLTSWKQLINGLVN-SRRIDAAISYFKQMPETCEKTW 241
GY+ G A +LF M + ++L SW +I+G S +D A F +MP+ +W
Sbjct: 200 GYVKCGSTESARELFDLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPDKDLISW 259
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
NS+I +++G +++A + P ++ +W+ +I GY ++G V A +F+ M RDV
Sbjct: 260 NSMIDGYVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVV 319
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
+N MI G +N E L+ F M KES SPD T VL+ + L L +H
Sbjct: 320 SYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMH-- 377
Query: 361 AIKIARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
+ I QF + A+I MY++CG+IQ A+L F + I WN++I GLA HG
Sbjct: 378 -LYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGIENKSIDHWNAMIGGLAIHGLG 436
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
E A ++ ++ KPDDITFVG+L+ACS++GLV +G F+ M+ K+ ++PR HY C
Sbjct: 437 ESAFDMLLQIERRSIKPDDITFVGLLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGC 496
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
+VD+L R G I+ A NL+ E+ IE + +W L AC H + GE+ + ++
Sbjct: 497 MVDILSRSGSIELAKNLIEEM---PIEPNDVIWRTFLAACNHHKEFETGELVAKHLIWEA 553
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
N Y++L+ +Y S G+ +D +RI MKE ++K PGCSWI+++ H F
Sbjct: 554 GYNPSSYVLLSNLYASFGKWKDVRRIRTIMKERKIEKVPGCSWIELDGRVHEFF 607
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 206/411 (50%), Gaps = 49/411 (11%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM- 78
D N +I Y K G+L A +F++MP+RD +YN++I G ++ + + A+E+FD M
Sbjct: 159 DLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTESARELFDLMP 218
Query: 79 -EVRDVVTWNSMISGYV-CNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESY 136
E++++++WNSMISGY + +D A ++F MP KD++SWN +I V R++ A+
Sbjct: 219 EEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPDKDLISWNSMIDGYVKHGRIEDAKYL 278
Query: 137 FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
F M RDV +W+ M++G + G + +A+ LFD+MP +DV ++N MIAGY+ N A
Sbjct: 279 FDVMPRRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEAL 338
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
++F M S P+ E T ++S + + G + +
Sbjct: 339 EIFSDMEKESHLS------------------------PD--ETTLVIVLSAIAQLGRLSK 372
Query: 257 A---HSYL-EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
A H Y+ EK + +I Y + G + A+ VF+ + + + WN MI GL
Sbjct: 373 AMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGIENKSIDHWNAMIGGLAI 432
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLGRQIHAQAIKIA 365
+ LGE +Q++ PD+ TF +L CS L +L R+ H ++
Sbjct: 433 HGLGESAFDMLLQIERRSIKPDDITFVGLLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 492
Query: 366 RNQFTTVSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYH 414
M+ + +R G+I+ A L+E + +D+I W + + +H
Sbjct: 493 H------YGCMVDILSRSGSIELAKNLIEEMPIEPNDVI-WRTFLAACNHH 536
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 180/372 (48%), Gaps = 18/372 (4%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTVIAGLMQ-S 65
A+ +FD+MPQRD+V++N MI GY K G ++A LF+ MPE +++ ++N++I+G Q S
Sbjct: 179 ARQIFDRMPQRDSVSYNSMIDGYVKCGSTESARELFDLMPEEMKNLISWNSMISGYAQTS 238
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D V A ++F M +D+++WNSMI GYV +G I++A +F MP +DVV+W+ +I
Sbjct: 239 DGVDIASKLFSEMPDKDLISWNSMIDGYVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYA 298
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP-----AKDVQAWN 180
+ A++ F +M RDV S+ M+ G V+ +EA ++F M + D
Sbjct: 299 KLGFVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLV 358
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN----SRRIDAAISYFKQMPET 236
++++ G + A D+ + ++ +L L++ I A+ FK +
Sbjct: 359 IVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGIENK 418
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF----EMGEVGSAIKVF 292
WN++I L +GL + A L + +I VG G V + F
Sbjct: 419 SIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGLLNACSHSGLVKEGLLCF 478
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEG-LKFFVQMKESGP-SPDNATFTSVLTICSDLPT 350
ELM + + +G + L G ++ + E P P++ + + L C+
Sbjct: 479 ELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLAACNHHKE 538
Query: 351 LDLGRQIHAQAI 362
+ G + I
Sbjct: 539 FETGELVAKHLI 550
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 151/313 (48%), Gaps = 32/313 (10%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A LF +MP +D ++WN MI GY K+G +++A LF+ MP RD+ T++T+I G + V
Sbjct: 244 ASKLFSEMPDKDLISWNSMIDGYVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLGFV 303
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-----DVVSWNLVIGA 123
AK +FD M RDVV++NSMI+GYV N EAL +F M + D + +V+ A
Sbjct: 304 HQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSA 363
Query: 124 LVNCQRMDLA--------ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
+ R+ A E F G VA +++ + G I A +F + K
Sbjct: 364 IAQLGRLSKAMDMHLYIVEKQFFLGGKLGVA----LIDMYSKCGSIQHAMLVFKGIENKS 419
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFK 231
+ WN MI G +G A D+ ++ R D ++ L+N +S + + F+
Sbjct: 420 IDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGLLNACSHSGLVKEGLLCFE 479
Query: 232 QMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVG-----YF 280
M E + + ++ +L R+G ++ A + +E+ P N W + F
Sbjct: 480 LMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLAACNHHKEF 539
Query: 281 EMGEVGSAIKVFE 293
E GE+ + ++E
Sbjct: 540 ETGELVAKHLIWE 552
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 140/267 (52%), Gaps = 16/267 (5%)
Query: 7 QEAQNLFDKMPQ--RDTVTWNVMIRGYFKNG-FLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+ A+ LFD MP+ ++ ++WN MI GY + +D A LF++MP++D+ ++N++I G +
Sbjct: 208 ESARELFDLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPDKDLISWNSMIDGYV 267
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
+ ++ AK +FD M RDVVTW++MI GY G + +A +F MP +DVVS+N +I
Sbjct: 268 KHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMIAG 327
Query: 124 LV----NCQRMDLAESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV-- 176
V N + +++ KE + D + I+++ + + GR+ +A + + K
Sbjct: 328 YVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFL 387
Query: 177 --QAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
+ +I Y G + A +F+ + ++ + W +I GL ++A Q+
Sbjct: 388 GGKLGVALIDMYSKCGSIQHAMLVFKGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIE 447
Query: 235 ETCEK----TWNSIISVLIRNGLVKEA 257
K T+ +++ +GLVKE
Sbjct: 448 RRSIKPDDITFVGLLNACSHSGLVKEG 474
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 191/637 (29%), Positives = 318/637 (49%), Gaps = 40/637 (6%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGLMQSDN 67
LFD+MPQRD+V+WN MI GY G L+N+ CLF M D ++++ ++ G+ +
Sbjct: 3 LFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKR 62
Query: 68 VQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
++V G+ V+ +V +S++ Y +++A F + + VSWN +I
Sbjct: 63 FDLGEQV-HGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIA 121
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF----DKMPAK---- 174
V + A F +G ++ + M +G + +F ++ AK
Sbjct: 122 GFVQVRDTKTA---FWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKL 178
Query: 175 ----DVQAWNLMIAGYLDNGCVGVAEDLFQKMH-DRDLTSWKQLINGLVNSRRIDAAISY 229
++ N MI+ Y + G V A+ +F + +DL SW +I GL + ++A
Sbjct: 179 GLEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFEL 238
Query: 230 FKQMP----ETCEKTWNSIISVLI---RNGLVKEAHSYLEKYPYSNIASWTNVIVGY--- 279
F +M ET T+ I+S K H + K + S +N ++
Sbjct: 239 FTEMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQ 298
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
F G + A+ +FE + +D+ WN ++ G +N L E+ +KFF ++ S D+ F+
Sbjct: 299 FPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFS 358
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI- 398
+VL CSDL TL LG+Q HA A K + V++++I MY++CG I++A F +
Sbjct: 359 AVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSK 418
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
H+ I+WN++I G A HG + +L+LF +M + K D +TF +L+ACS+ GL+ +G
Sbjct: 419 HNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 478
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
+ M+ Y +QPR HY VDLLGR GL+++ L I + + P V LG CR
Sbjct: 479 LNSMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKEL---IESMPLNPDPMVLKTFLGVCR 535
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
I++ ++E+EP + Y+ L+ MY + E+ + MKE GVKK PG
Sbjct: 536 ACGEIEMATQVANHLLEIEPEDHFAYVSLSHMYSDLKKWEEKANVKKMMKERGVKKVPGW 595
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
SWI+I + + F + D SH + ++ L E++
Sbjct: 596 SWIEIRNQVNAFNAEDRSHSLSKEIYLMIEDLTQEMQ 632
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 205/444 (46%), Gaps = 26/444 (5%)
Query: 103 LRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA----RDVASWTIMVNGLVRE 158
+R+F MP +D VSWN +I +C +++ + F +M D S++ ++ G+
Sbjct: 1 MRLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASA 60
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDN---GCVGVAEDL--FQKMHDRDLTSWKQL 213
R ++ + K N+ + L + C V + F ++ + + SW L
Sbjct: 61 KRFDLGEQVHG-LVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNAL 119
Query: 214 INGLVNSRRIDAAISYFKQMPETC-----EKTWNSIISVL---IRNGLVKEAHSYLEKYP 265
I G V R A M + T+ ++++L + L+K+ H+ + K
Sbjct: 120 IAGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLG 179
Query: 266 YSNIASWTNVIV-GYFEMGEVGSAIKVFE-LMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
+ + N ++ Y G V A +VF+ L ++D+ WN MI GL +++ E + F
Sbjct: 180 LEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELF 239
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR- 382
+M + D T+T +++ CS G+ +H IK Q T+VSNA+I+MY +
Sbjct: 240 TEMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQF 299
Query: 383 -CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
G ++ AL F S+ D++SWNSI+ G + +G +E A++ F +R ++ + DD F
Sbjct: 300 PTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSA 359
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
VL +CS + G+ + K + + ++ + + G+I+ A +I +
Sbjct: 360 VLRSCSDLATLQLGQQT-HALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSK 418
Query: 502 GIEVSPTVWGALLGACRIHNNIKV 525
++ W A++ H + +V
Sbjct: 419 HNTIA---WNAMILGYAQHGSGQV 439
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
+++A +LF+ + +D V+WN ++ G+ +NG ++A+ F + E D + ++ V+
Sbjct: 304 MKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRS 363
Query: 62 LMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-DVV 115
+Q ++ E + VT +S+I Y G+I+ A + F + K + +
Sbjct: 364 CSDLATLQLGQQTHALATKSSFESNEFVT-SSLILMYSKCGVIENARKCFEQISSKHNTI 422
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNGLVREGRIVEARKLFDKM 171
+WN +I ++ F +M ++V ++T ++ G I E +L + M
Sbjct: 423 AWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNSM 482
Query: 172 -PAKDVQAWNLMIAGYLD----NGCVGVAEDLFQKM 202
P +Q A +D G V ++L + M
Sbjct: 483 EPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESM 518
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/535 (32%), Positives = 271/535 (50%), Gaps = 21/535 (3%)
Query: 99 IDEALRVFHGMPLKDVVS-WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV- 156
+ EA+ + H + ++ +I A V + ++L A + + N L+
Sbjct: 71 VKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLD 130
Query: 157 ---REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL 213
+ G +V+A+ LFD+M +D+ +WN MI GY G + A LF +M RD SW
Sbjct: 131 MYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAA 190
Query: 214 INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG--------LVKEAHSYLEKYP 265
I+G V + A+ F+ M + N L KE H YL +
Sbjct: 191 ISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTE 250
Query: 266 YS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
+ + W+ ++ Y + G + A +F+ M RDV W MI E+ EEG F
Sbjct: 251 LNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFR 310
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
+ +SG P+ TF VL C+D LG+++H + + + +A++ MY++CG
Sbjct: 311 DLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCG 370
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
N + A F+ + D++SW S+I G A +G ++AL FE + + KPD +T+VGVLS
Sbjct: 371 NTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLS 430
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
AC++AGLVD+G YF +K K+ L + HY CV+DLL R G EA N++ D +
Sbjct: 431 ACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENII-----DNMP 485
Query: 505 VSPT--VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
V P +W +LLG CRIH N+++ + A + + E+EP N Y+ L +Y + G +
Sbjct: 486 VKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVAN 545
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
+ M G+ K+PG SWI+I HVFL GD+SHPK + L L +I+ E
Sbjct: 546 VRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEE 600
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 210/479 (43%), Gaps = 35/479 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTV-TWNVMIRGYFKNGFLDNAMCLFNQMPERD----MFTYN 56
+ R++EA L + R + ++ +I ++ L+ + + +F N
Sbjct: 67 QQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISN 126
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
++ + ++ A+ +FD M RD+ +WN+MI GY G +++A ++F MP +D S
Sbjct: 127 RLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFS 186
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVN----------GLVREGRIVEARK 166
WN I V + A F+ M + +S +R G+ +
Sbjct: 187 WNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYL 246
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ ++ +V W+ ++ Y G + A +F +M DRD+ SW +I+ R +
Sbjct: 247 IRTELNLDEV-VWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEG 305
Query: 227 ISYFKQMPETC----EKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVG- 278
F+ + ++ E T+ +++ + L KE H Y+ Y + + +V
Sbjct: 306 FLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHM 365
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G A +VF M D+ W +I G +N +E L FF + +SG PD T+
Sbjct: 366 YSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTY 425
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSV 396
VL+ C+ +D G + + +IK T + +I + AR G + A ++
Sbjct: 426 VGVLSACTHAGLVDKGLE-YFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNM 484
Query: 397 PIH-DIISWNSIICGLAYHGYAEKALELFERM--RLTDFKPDD-ITFVGVLSACSYAGL 451
P+ D W S++ G HG LEL +R L + +P++ T++ + + + AGL
Sbjct: 485 PVKPDKFLWASLLGGCRIHG----NLELAKRAAKALYEIEPENPATYITLANIYANAGL 539
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 180/569 (31%), Positives = 297/569 (52%), Gaps = 42/569 (7%)
Query: 43 LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGL 98
LF+++PE ++F +NT+I G + D Q ++ M R D T+ + G+ +
Sbjct: 95 LFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFT-RDI 153
Query: 99 IDEALRVFHGMPLKDVVSWNLVI-GALVN----CQRMDLAESYFKEMGARDVASWTIMVN 153
E R HG LK + +N+ + ALV C ++D A F DV +W ++++
Sbjct: 154 ALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIIS 213
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL 213
+ G+ E+R+LF M K V + + L + C + +DL + K+
Sbjct: 214 AYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVL-SACSKL----------KDLRTGKK- 261
Query: 214 INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWT 273
++ V + ++++ + N++I + G + A +I SWT
Sbjct: 262 VHSYVKNCKVESNLVL-----------ENAMIDMYADCGEMDSALGIFRSMNNRDIISWT 310
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++ G+ +GE+ A F+ M +D W MI G ++ +E L+ F M+ + P
Sbjct: 311 TIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKP 370
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMYARCGNIQSAL 390
D T SVLT C+ L L+LG I I RN+ V NA+I MY +CG++ A
Sbjct: 371 DEFTMVSVLTACAHLGALELGEWIRTY---IDRNKIKNDLFVRNALIDMYFKCGDVDKAE 427
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F + D +W ++I GLA +G+ EKAL++F M PD+IT++GVLSAC++ G
Sbjct: 428 SIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTG 487
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
LVD+GR YF M +++ ++P AHY C+VDLL R G + EA ++ + I+ + VW
Sbjct: 488 LVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENM---PIKANSIVW 544
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
GALL CR++ + E+ ++++ELEP+N VY++L +Y +C R D + + M +
Sbjct: 545 GALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDK 604
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
G+KK PGCS I++N H F++GD SHP+
Sbjct: 605 GIKKXPGCSLIEMNGRVHEFVAGDRSHPQ 633
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 133/539 (24%), Positives = 209/539 (38%), Gaps = 137/539 (25%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER---------- 50
Q A+ LFD++P+ + WN MIRGY + F + L+ +M P+R
Sbjct: 90 QYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGF 149
Query: 51 -----------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWN 87
++F + ++ + + A+ VFD DV+TWN
Sbjct: 150 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 209
Query: 88 SMISGYVCNGLIDEALRVFHGM--------------------PLKDV------------- 114
+IS Y G +E+ R+F M LKD+
Sbjct: 210 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 269
Query: 115 -VSWNLV-----IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
V NLV I +C MD A F+ M RD+ SWT +V+G G I AR F
Sbjct: 270 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYF 329
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
DKMP KD +W MI GY + S R A+
Sbjct: 330 DKMPEKDYVSWTAMIDGY-------------------------------IRSNRFKEALE 358
Query: 229 YFKQMPETCEK----TWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YF 280
F+ M T K T S+++ G ++ +Y+++ N N ++ YF
Sbjct: 359 LFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYF 418
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G+V A +F M+ RD W MI GL N GE+ L F M ++ PD T+
Sbjct: 419 KCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIG 478
Query: 341 VLTICSDLPTLDLGRQI-------HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
VL+ C+ +D GR+ H IA ++ + AR G ++ A
Sbjct: 479 VLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH------YGCLVDLLARAGRLKEAYEVI 532
Query: 394 SSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD----ITFVGVLSACS 447
++PI + I W +++ G Y E + ++ + +PD+ + + +AC
Sbjct: 533 ENMPIKANSIVWGALLAGCRV--YRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACK 589
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 174/399 (43%), Gaps = 65/399 (16%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMF----TYNTVI 59
++ A+ +FD P+ D +TWN++I Y K G + + LF M ++ + T V+
Sbjct: 188 GQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVL 247
Query: 60 AGLMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+ + +++ K+V ++ ++V N+MI Y G +D AL +F M +D++
Sbjct: 248 SACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDII 307
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
SW ++ N +D+A +YF +M +D SWT M++G +R R EA +LF M A +
Sbjct: 308 SWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATN 367
Query: 176 VQA----------------------W-----------------NLMIAGYLDNGCVGVAE 196
V+ W N +I Y G V AE
Sbjct: 368 VKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAE 427
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNG 252
+F++M RD +W +I GL + + A+ F M + E T+ ++S G
Sbjct: 428 SIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTG 487
Query: 253 LVKEAHSYLEKYPYS-----NIASWTNVIVGYFEMGEVGSAIKVFELMTTR-DVTVWNVM 306
LV + Y + NIA + ++ G + A +V E M + + VW +
Sbjct: 488 LVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGAL 547
Query: 307 IFGL---GENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
+ G E+D+ E +K ++++ PDN +L
Sbjct: 548 LAGCRVYRESDMAEMVVKQILELE-----PDNGAVYVLL 581
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 126/295 (42%), Gaps = 8/295 (2%)
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
E G+ A ++F+ + ++ +WN MI G D + G+ +++M G PD TF
Sbjct: 85 EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPF 144
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
+ + L+ GRQ+H +K V A++ MY CG + +A F P D
Sbjct: 145 LFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKAD 204
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+I+WN II G E++ LF M P +T V VLSACS + G+
Sbjct: 205 VITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHS 264
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
+KN ++ ++D+ G +D A+ + + I W ++
Sbjct: 265 YVKNCK-VESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDI----ISWTTIVSG---F 316
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
N+ ++A ++ + + + + Y+ R ++A +F M+ VK +
Sbjct: 317 TNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPD 371
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 110/289 (38%), Gaps = 43/289 (14%)
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA--RCGNIQSA 389
SP S+L C ++D +Q+H QAIK N + N ++T G+ Q A
Sbjct: 36 SPPTHPLISLLETCE---SMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYA 92
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F +P ++ WN++I G + + + + L+ M KPD TF + +
Sbjct: 93 RRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRD 152
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI-RADGI----- 503
++ GR + K+ LQ +T +V + G +D A + + +AD I
Sbjct: 153 IALEYGRQLHGHVL-KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 211
Query: 504 -----------------------EVSPTVWG--ALLGACRIHNNIKVGEIAGERVMELEP 538
+V PT +L AC +++ G+ V +
Sbjct: 212 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKV 271
Query: 539 NNSGVYL-ILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
++ V + +MY CG + A IF M + SW I G
Sbjct: 272 ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDI-----ISWTTIVSG 315
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 192/654 (29%), Positives = 316/654 (48%), Gaps = 60/654 (9%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFL----DNAMCLFNQMPERDMFTYNTVIA 60
++ A LFD+MP RD+V+WN MI G+ G L D C+ + E D +T+ +++
Sbjct: 48 ELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLK 107
Query: 61 GLMQSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
G+ + ++V + +V ++++ Y +++A F + + VS
Sbjct: 108 GIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVS 167
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
WN +I + + G R+ A W +++ + +EG V+ +P D
Sbjct: 168 WNAMING-------------YAQAGDRETAFW--LLDCMEQEGEKVDDGTYAPLLPLLDD 212
Query: 177 QAW-----------------------NLMIAGYLDNGCVGVAEDLFQKMHD-RDLTSWKQ 212
+ N +I Y G + A+ +F RDL +W
Sbjct: 213 ADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNS 272
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEKYP 265
L+ + + D A M E + ++ SIIS + + H + K
Sbjct: 273 LLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRG 332
Query: 266 YSNIASWTNVIVGYFEMGEVGS---AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ +N ++ + + GS A+ +FE + +D WN ++ GL + E+ +K
Sbjct: 333 FEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKS 392
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F+ M+ + D+ +F++VL CSDL T LG+QIH A+K VS+++I MY++
Sbjct: 393 FLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSK 452
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CG I+ A F + I+WN+++ G A HG AL+LF M K D ITFV V
Sbjct: 453 CGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAV 512
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
L+ACS+ GLV+QG + CM++ Y + PR HY C VDL GR G ++EA L+ E+
Sbjct: 513 LTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMP--- 569
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
+ TVW LGACR NI++ ++E+EP Y++L+ MY + R ++ +
Sbjct: 570 FKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAK 629
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+ MKE GVKK PG SWI++N+ H F++ D SHP ++ +LL +L EI R
Sbjct: 630 VKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIYFLLEVLLEEITR 683
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 190/440 (43%), Gaps = 46/440 (10%)
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
DV N ++ GY + A+ LF +M RD SW +I G +N ++A+ + M
Sbjct: 32 DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMR 91
Query: 235 ----ETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVG 286
E T+ S++ + G+ ++ HS + K Y+ N+ + + ++ Y + ++
Sbjct: 92 SCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLE 151
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A F ++ + WN MI G + E M++ G D+ T+ +L +
Sbjct: 152 DAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLD 211
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF-SSVPIHDIISWN 405
D +L Q+H + IK T+ NA+IT Y++CG++ A F SS I D+++WN
Sbjct: 212 DADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWN 271
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNK 465
S++ + A +L M+ F+PD ++ ++SAC + + GR + +
Sbjct: 272 SLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKR 331
Query: 466 YFLQ--PRS------------------------------AHYTCVVDLLGRFGLIDEAMN 493
F Q P S + ++ L + G ++A+
Sbjct: 332 GFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVK 391
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE---PNNSGVYLILTEM 550
+R+ +++ + A+L +C ++G+ V+ L+ +N V L M
Sbjct: 392 SFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQI--HVLALKYGLESNEFVSSSLIFM 449
Query: 551 YLSCGRREDAKRIFAQMKEN 570
Y CG EDA+R F + +N
Sbjct: 450 YSKCGIIEDARRSFEEASKN 469
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%)
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
+++ + N++ GY++ E+ SA +F+ M RD WN MI G E M
Sbjct: 31 ADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCM 90
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
+ G D TF S+L + LG+Q+H+ IK+ + +A++ MYA+C +
Sbjct: 91 RSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKL 150
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
+ A L F S+ H+ +SWN++I G A G E A L + M K DD T+ +L
Sbjct: 151 EDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLL 207
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 204/649 (31%), Positives = 324/649 (49%), Gaps = 58/649 (8%)
Query: 2 RNARIQEAQNLFDK--MPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM-----FT 54
R +++AQ +FD+ + D + WN +I Y +G + LF +M + T
Sbjct: 168 RCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELT 227
Query: 55 YNTVIAGLMQS-DNVQGA----KEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
Y +V+ S + GA + + G+E ++ WNS+++ Y G + A ++F +
Sbjct: 228 YASVVNACGSSGEEKYGAMVHGRIIKAGLEATNL--WNSLVTFYGKCGNLQHASQLFERI 285
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD---------VASWTIMVNGL--VRE 158
KDVVSWN +I A + A F+ M + S V+GL +R
Sbjct: 286 SRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRC 345
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
GR + A +F D N +I Y VG A ++F+++ RD+ SW ++ G
Sbjct: 346 GREIHAH-IFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYE 404
Query: 219 NSRRIDAAISYFKQMP----ETCEKTWNSIISVLIRN--GLV-----KEAHSYLEK--YP 265
+ + FK+M E + I + R+ GL+ KE H Y+ + P
Sbjct: 405 QNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITP 464
Query: 266 YSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
S +N I+ Y + + A K+F+ M RD WN M+ G N E+ L F+
Sbjct: 465 GGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFL 524
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ-------FTTVSNAMI 377
+ + G D+ + + +LT C L +L LG+Q HA K+ Q +++NA+I
Sbjct: 525 DILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALI 584
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
+MY++CG+I+ A F + D+ SW ++I G A+HG A +AL+LFERM+ KP+ +
Sbjct: 585 SMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQV 644
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
TF+ +L AC++ GLV +G YYFD M N Y L P HY C++DL GR G D A +L+
Sbjct: 645 TFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEF 704
Query: 498 IRADGIEV-SP------TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
GI + P +W LLGAC + +G A +++ELEP + Y++L +
Sbjct: 705 ----GITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANL 760
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
Y S G EDA ++ M++ G++KE GCSWI + HVF++GD HP+
Sbjct: 761 YASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQ 809
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 129/575 (22%), Positives = 246/575 (42%), Gaps = 99/575 (17%)
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFH----------GMPLKD 113
+ + ++ A+++FD RDV++W+++I+ Y G +A +F G L
Sbjct: 67 EHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLAS 126
Query: 114 VVSWNLVIGALVNCQRM---DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
++ + G + C+++ + + + G R A+W M + R G + +A+++FD+
Sbjct: 127 LLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIR--AAWITMYS---RCGVLEDAQRVFDE 181
Query: 171 --MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+ A D+ WN +IA Y+ +GC LF KM + + +L
Sbjct: 182 TSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELT-------------- 227
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
+ + C + ++ ++K LE +N+ W +++ Y + G + A
Sbjct: 228 -YASVVNACGSSGEEKYGAMVHGRIIKAG---LEA---TNL--WNSLVTFYGKCGNLQHA 278
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP--SPDNATFTSVLTICS 346
++FE ++ +DV WN MI + GE L F +M + P P+ TF S+L+ S
Sbjct: 279 SQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVS 338
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
L L GR+IHA +++ T+++N++IT Y++C + A F + + DIISWNS
Sbjct: 339 GLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNS 398
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS------------------- 447
++ G + + ++F+RM L+ +PD + + +A S
Sbjct: 399 MLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYI 458
Query: 448 --------------------YAGL--VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRF 485
YA + F MKN+ S + ++D R
Sbjct: 459 LRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNR-----DSYSWNAMMDGYSRN 513
Query: 486 GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-----PNN 540
++ + + +I G + LL +C ++++G+ V +L P+
Sbjct: 514 AKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQ 573
Query: 541 SGVYLI---LTEMYLSCGRREDAKRIFAQMKENGV 572
+ I L MY CG +DA ++F +M+ V
Sbjct: 574 DSLLSINNALISMYSKCGSIKDAAQVFLKMERKDV 608
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 141/613 (23%), Positives = 241/613 (39%), Gaps = 125/613 (20%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
+ R++ AQ LFD P RD ++W+ +I Y + G A LF +M + +A L
Sbjct: 68 HERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASL 127
Query: 63 MQSDNVQG---------------------------------------AKEVFD--GMEVR 81
++ G A+ VFD +
Sbjct: 128 LKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLAL 187
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS-WNLVIGALVNCQRMDLAESYFKEM 140
D++ WNS+I+ Y+ +G E LR+F M VV+ L ++VN E Y +
Sbjct: 188 DILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMV 247
Query: 141 GARDVAS-------WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
R + + W +V + G + A +LF+++ KDV +WN MIA G
Sbjct: 248 HGRIIKAGLEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGE 307
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL----- 248
A LF++M + V R+ T+ S++S +
Sbjct: 308 NALGLFRRMLK---------VEPPVQPNRV----------------TFLSLLSAVSGLSA 342
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF-EMGEVGSAIKVFELMTTRDVTVWNVMI 307
+R G +E H+++ + S TN ++ ++ + EVG A ++FE + RD+ WN M+
Sbjct: 343 LRCG--REIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSML 400
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC----SDLPTLDLGRQIHAQAIK 363
G +N+ F +M SG PD+ + T + S L G++IH ++
Sbjct: 401 AGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILR 460
Query: 364 --IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
+VSNA++ MYA+ I A F + D SWN+++ G + + E L
Sbjct: 461 RITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVL 520
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF----------DCMKNKYFLQPR 471
+F + F D ++ +L++C + G+ + DC L
Sbjct: 521 MIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSIN 580
Query: 472 SA---------------------------HYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
+A +T ++ GL EA+ L ++ DGI+
Sbjct: 581 NALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIK 640
Query: 505 VSPTVWGALLGAC 517
+ + ALL AC
Sbjct: 641 PNQVTFLALLMAC 653
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 4/198 (2%)
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
+ H + ++ + ++ + +V E + A ++F+ RDV W+ +I
Sbjct: 43 QNHGFSSQFIF-RCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGN 101
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
+ F +M G P+ + S+L + + L RQ+H +I+ + + A
Sbjct: 102 FAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAA 161
Query: 376 MITMYARCGNIQSALLEF--SSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDF 432
ITMY+RCG ++ A F +S+ DI+ WNSII +HG + L LF +M +
Sbjct: 162 WITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVV 221
Query: 433 KPDDITFVGVLSACSYAG 450
P ++T+ V++AC +G
Sbjct: 222 APTELTYASVVNACGSSG 239
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 177/577 (30%), Positives = 302/577 (52%), Gaps = 46/577 (7%)
Query: 37 LDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISG-YVC 95
L+ A +F+++P+ + F +NT+I G V D+V+ + Y
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAY-----ASGPDPVLSIWAFLDMVSESQCYPNKYTF 134
Query: 96 NGLIDEALRV--------FHGMPLK-----DVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
LI A V HGM +K DV N +I +C +D A F +
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE 194
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
+DV SW M+NG V++G +A +LF KM ++DV+A ++ + G L + C +
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL-SACAKI-------- 245
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLE 262
R+L +Q+ + + R++ ++ N+++ + + G +++A +
Sbjct: 246 --RNLEFGRQVCS-YIEENRVNVNLTLA-----------NAMLDMYTKCGSIEDAKRLFD 291
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ +WT ++ GY + +A +V M +D+ WN +I +N E L
Sbjct: 292 AMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIV 351
Query: 323 FVQMK-ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F +++ + + T S L+ C+ + L+LGR IH+ K V++A+I MY+
Sbjct: 352 FHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYS 411
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CG+++ + F+SV D+ W+++I GLA HG +A+++F +M+ + KP+ +TF
Sbjct: 412 KCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTN 471
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
V ACS+ GLVD+ F M++ Y + P HY C+VD+LGR G +++A+ I A
Sbjct: 472 VFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF---IEAM 528
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
I S +VWGALLGAC+IH N+ + E+A R++ELEP N G +++L+ +Y G+ E+
Sbjct: 529 PIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVS 588
Query: 562 RIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+ M+ G+KKEPGCS I+I+ H FLSGD++HP
Sbjct: 589 ELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHP 625
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 218/494 (44%), Gaps = 69/494 (13%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN--------GFLD---NAMCLFNQMP---- 48
A ++ A+ +FD++P+ ++ WN +IR Y FLD + C N+
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 49 -------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDV 83
D+F N++I ++ A +VF ++ +DV
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQRMDLAE------SY 136
V+WNSMI+G+V G D+AL +F M +DV + ++ ++G L C ++ E SY
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 137 FKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
+E ++ M++ + G I +A++LFD M KD W M+ GY + A
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLIR 250
++ M +D+ +W LI+ + + + A+ F ++ + + T S +S +
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 251 NG---LVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVM 306
G L + HSY++K+ N + +I Y + G++ + +VF + RDV VW+ M
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ-----A 361
I GL + G E + F +M+E+ P+ TFT+V CS +D + Q
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKA 420
I + + + + R G ++ A+ ++PI S W +++ H A
Sbjct: 498 IVPEEKHYACI----VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH--ANLN 551
Query: 421 LELFERMRLTDFKP 434
L RL + +P
Sbjct: 552 LAEMACTRLLELEP 565
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 191/643 (29%), Positives = 328/643 (51%), Gaps = 45/643 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYNTVI 59
I EA +F+ + + V ++ M++GY KN L +A+ + +M P FTY +
Sbjct: 92 ITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQL 151
Query: 60 AGLMQSDNVQGAKEVFDGMEV-----RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
+G ++ +++ +E+ GM + ++ ++++ Y I++A ++F MP +D+
Sbjct: 152 SG--ENLDLRRGREIH-GMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDL 208
Query: 115 VSWNLVIGALVN---CQRMDLAESYFKEMGARDVASWTIMVNGLV------REGRIVEA- 164
VSWN V+ +R +E G + + + V V R GR +
Sbjct: 209 VSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGY 268
Query: 165 --RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV-NSR 221
R F+ M V M+ Y G V A +F+ M R++ SW +I+G N
Sbjct: 269 AFRAGFEYM----VNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGE 324
Query: 222 RIDAAISYFKQMPETCEKTWNSIISVL--------IRNGLVKEAHSYL-EKYPYSNIASW 272
+A ++ K + E E T S++ L + G + H L EK +++
Sbjct: 325 SEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERG--RYVHRLLDEKKIGFDVSVM 382
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
++I Y + V A VF + + V WN MI G +N E L F +M+
Sbjct: 383 NSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIK 442
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD+ T SV+T +DL + IH AI+ ++ V A+I +A+CG IQ+A
Sbjct: 443 PDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKL 502
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F + +I+WN++I G +G+ +AL+LF M+ KP++ITF+ V++ACS++GLV
Sbjct: 503 FDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLV 562
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
++G YYF+ MK Y L+P HY +VDLLGR G +D+A + ++ ++ TV GA
Sbjct: 563 EEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDM---PVKPGITVLGA 619
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+LGACRIH N+++GE + + +L+P++ G +++L MY S + R+ M++ G+
Sbjct: 620 MLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGI 679
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+K PGCS +++ + H F SG ++HP+ R+ L L E++
Sbjct: 680 QKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMK 722
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 213/484 (44%), Gaps = 80/484 (16%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--------------- 49
+I++A +F++MPQRD V+WN ++ GY +NGF A+ + QM E
Sbjct: 192 QIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLP 251
Query: 50 -------------------RDMFTYNTVIAGLM-----QSDNVQGAKEVFDGMEVRDVVT 85
R F Y +A M + +V+ A+ VF GM R+VV+
Sbjct: 252 AVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVS 311
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQRM-DLAESYF------ 137
WN+MI GY NG +EA F M + V N+ ++GAL C + DL +
Sbjct: 312 WNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLD 371
Query: 138 -KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
K++G DV+ +++ + R+ A +F + K V WN MI GY NGCV A
Sbjct: 372 EKKIGF-DVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEAL 430
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
+LF +M D+ +S + + I+ + T + W I + IR + K
Sbjct: 431 NLFCEMQSHDIKP---------DSFTLVSVITALADLSVTRQAKW--IHGLAIRTLMDK- 478
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
N+ T +I + + G + +A K+F+LM R V WN MI G G N G
Sbjct: 479 -----------NVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHG 527
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-- 374
E L F +M+ P+ TF SV+ CS ++ G + +++K T+ +
Sbjct: 528 REALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEG-MYYFESMKENYGLEPTMDHYG 586
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM--RLTDF 432
AM+ + R G + A +P+ I+ + G K +EL E+ L D
Sbjct: 587 AMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGAC---RIHKNVELGEKTADELFDL 643
Query: 433 KPDD 436
PDD
Sbjct: 644 DPDD 647
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 159/369 (43%), Gaps = 45/369 (12%)
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
T K + I+ ++I+NG E H + T +I + + + A +VFE +
Sbjct: 55 TSLKELHQILPLIIKNGFYNE-HLF-----------QTKLISLFCKFNSITEAARVFEPV 102
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+ +++ M+ G +N + ++F+ +M+ P FT +L + + L GR
Sbjct: 103 EHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGR 162
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+IH I A++ +YA+C I+ A F +P D++SWN+++ G A +G
Sbjct: 163 EIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNG 222
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR----YYF-----------D 460
+A +A+++ +M+ KPD IT V VL A + + GR Y F
Sbjct: 223 FARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVAT 282
Query: 461 CMKNKYFL--QPRSAH-------------YTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
M + YF RSA + ++D + G +EA ++ +G+E
Sbjct: 283 AMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEP 342
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI--LTEMYLSCGRREDAKRI 563
+ L AC +++ G R+++ + V ++ L MY C R + A +
Sbjct: 343 TNVSMMGALHACANLGDLERGRYV-HRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASV 401
Query: 564 FAQMKENGV 572
F +K V
Sbjct: 402 FGNLKHKTV 410
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 187/640 (29%), Positives = 324/640 (50%), Gaps = 30/640 (4%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------ERDMFTYN 56
+ +++ A+ +FDKMP+RD +W +++GY + A+ LF+ M D + +
Sbjct: 41 SGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLS 100
Query: 57 TVIAGLMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
+ QS N+ + + E + V ++++ Y+ G ID++ RVF MP +
Sbjct: 101 VALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFR 160
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMG-----ARDVASWTIMVNGLVREGRIVEARKL 167
+ V+W I LV+ YF +M + D ++ I + ++ R++
Sbjct: 161 NSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREI 220
Query: 168 FDKMPAKDVQA--W--NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
+ K A W N + Y + G + LF+ M +RD+ W LI + +
Sbjct: 221 HTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQE 280
Query: 224 DAAISYFKQMPETC----EKTWNSIISV---LIRNGLVKEAHSYLEKYPYSNIASWTNVI 276
+ A++ F M + E+T+ S + L R ++ H + + S +N +
Sbjct: 281 EKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSM 340
Query: 277 VG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ Y ++ SA +F+ M RD+ W+ +I G + GEE K+F M+++GP P +
Sbjct: 341 MKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTD 400
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
S+L++ + L+ GRQ+HA A+ + Q T+ +A+I MY++CG+I A F
Sbjct: 401 FALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFEE 460
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
DI+S ++I G A HG E+A++LFE+ F+PDD+TF+ VL+ACS++G +D G
Sbjct: 461 KDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQLDLG 520
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
YF+ M+ Y ++P HY C+VDLL R G +++A ++NE+ +V VW LL
Sbjct: 521 FQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDV---VWTTLLR 577
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
AC+ +++ G A +R++EL+P + + L ++ S G ++A + MK GV KE
Sbjct: 578 ACKEKGDVERGRRAAQRILELDPTSFTTLVTLANIHSSTGNWKEAANVRKDMKSKGVIKE 637
Query: 576 PGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
PG S I I D F SG SHP+ + +L L+ + E
Sbjct: 638 PGWSSILIKDQVSAFASGSLSHPQSEDVCSILELVVIDSE 677
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 193/455 (42%), Gaps = 22/455 (4%)
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG-- 141
V +S + + +G + A +VF MP +D+ SW ++ V + + A F M
Sbjct: 29 VDTHSQLQDLIDSGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVD 88
Query: 142 ----ARDVASWTIMVNGLVREGRIVEARKLF----DKMPAKDVQAWNLMIAGYLDNGCVG 193
+ D ++ + + I L V + ++ Y+ G +
Sbjct: 89 PLGVSGDTYVLSVALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKID 148
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
+ +F +M R+ +W I GLV++ + YF QM + + ++ +
Sbjct: 149 KSCRVFAEMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKAC 208
Query: 254 V--------KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWN 304
+E H+++ ++ I N + Y E GE+ +++FE M+ RDV +W
Sbjct: 209 ADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWT 268
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
+I E+ + F+ M+ S SP+ TF S C+ L L G Q+H +
Sbjct: 269 SLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSL 328
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+VSN+M+ MY+ C + SA + F + DIISW++II G + + E+ + F
Sbjct: 329 GLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYF 388
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
MR +P D +LS +++QGR + L+ + ++++ +
Sbjct: 389 SWMRQAGPQPTDFALASLLSVSGIMAVLEQGR-QVHALALYLGLEQNPTIRSALINMYSK 447
Query: 485 FGLIDEAMNLLNEI-RADGIEVSPTVWG-ALLGAC 517
G I EA + E R D + ++ + G A G C
Sbjct: 448 CGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKC 482
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 130/553 (23%), Positives = 216/553 (39%), Gaps = 89/553 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-----ERDMFTY 55
MR +I ++ +F +MP R++VTW I G G + F+QM D F +
Sbjct: 142 MRIGKIDKSCRVFAEMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAF 201
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRD--VVTW--NSMISGYVCNGLIDEALRVFHGMPL 111
+ V+ +E+ + V+ + W NS+ + Y G + + LR+F M
Sbjct: 202 AIALKACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSE 261
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVEARKL 167
+DVV W +I A + + + A + F M V+ ++ R+V +L
Sbjct: 262 RDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQL 321
Query: 168 ----FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
F + N M+ Y + A LFQ M RD+ SW +I G +
Sbjct: 322 HGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFG 381
Query: 224 DAAISYFKQM----PETCEKTWNSIISV-----LIRNGLVKEAHSY-----LEKYPYSNI 269
+ YF M P+ + S++SV ++ G ++ H+ LE+ P
Sbjct: 382 EECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQG--RQVHALALYLGLEQNPTIRS 439
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
A +I Y + G + A KVFE D+ MI G E+ EE + F + +
Sbjct: 440 A----LINMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKL 495
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQI-----HAQAIKIARNQFTTVSNAMITMYARCG 384
PD+ TF SVLT CS LDLG Q ++ A+ + M+ + R G
Sbjct: 496 SFRPDDVTFISVLTACSHSGQLDLGFQYFNLMQENYNMRPAKEHY----GCMVDLLCRAG 551
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+ A + +P +K DD+ + +L
Sbjct: 552 RLNDAEKMINEMP----------------------------------WKKDDVVWTTLLR 577
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL---GRFGLIDEAMNLLNEIRAD 501
AC G V++GR + L+ +T +V L G EA N+ ++++
Sbjct: 578 ACKEKGDVERGR-----RAAQRILELDPTSFTTLVTLANIHSSTGNWKEAANVRKDMKSK 632
Query: 502 GIEVSPTVWGALL 514
G+ P W ++L
Sbjct: 633 GVIKEPG-WSSIL 644
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 144/361 (39%), Gaps = 36/361 (9%)
Query: 244 IISVLIRNG--LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
++S ++RNG + + + +EK +SN + + + G++ A +VF+ M RD+
Sbjct: 1 MVSTVVRNGGRIRRFCTASIEKSMHSNHVDTHSQLQDLIDSGKLRVARQVFDKMPRRDIK 60
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKES--GPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
W ++ G EE L F M+ G S D + L C + G +HA
Sbjct: 61 SWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSVALKACGQSSNIAYGESLHA 120
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
A K V +A++ MY R G I + F+ +P + ++W + I GL + G +
Sbjct: 121 YAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRNSVTWTAFITGLVHAGLHYE 180
Query: 420 ALELFERM-RLTDFKPDDITFVGVLSACSYAGLVDQGR---------------------- 456
L F +M R D F L AC+ V GR
Sbjct: 181 GLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIHTHVIVKGFAAILWVANSLA 240
Query: 457 -YYFDC--MKNKYFLQPRSAH-----YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
Y +C M++ L + +T ++ R G ++A+N +R + +
Sbjct: 241 TMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQ 300
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNS-GVYLILTEMYLSCGRREDAKRIFAQM 567
+ + AC + + GE V L +S V + +MY +C + + A +F M
Sbjct: 301 TFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGM 360
Query: 568 K 568
+
Sbjct: 361 R 361
>gi|449456490|ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 192/679 (28%), Positives = 319/679 (46%), Gaps = 115/679 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ + AQ LF++MP R V+WN+MI GY K G A+ L ++M ++ T +
Sbjct: 48 VRDGHLDLAQTLFNEMPVRSVVSWNIMISGYSKFGKYSEALNLASEMHCNNVKLNETTFS 107
Query: 61 GLMQS---------------------------------------DNVQGAKEVFDGMEVR 81
L+ +++ GAK+VFD + +
Sbjct: 108 SLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDISGAKQVFDELHDK 167
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV----NCQR-MDLA--- 133
+ + W+ ++ GYV L+D+AL +F +P +DVV+W +I A NC+R ++L
Sbjct: 168 NDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYARSEHNCKRGLELFCSM 227
Query: 134 -------------ESYFKEMGARDVASWTIMVNGLVRE--------------------GR 160
+S + G SW +V+G++ +
Sbjct: 228 RMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEA 287
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
I A+ ++D M ++A N ++ G + G + AE++F K+ +++ S+ ++ G S
Sbjct: 288 IDNAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLMLKGYATS 347
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
RI+ + F++M + N++ISV RNG
Sbjct: 348 GRIEGSKRLFERMTHKTTSSLNTMISVYSRNG---------------------------- 379
Query: 281 EMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
E+ A K+FE + + D WN MI G +N E LK ++ M + +TF+
Sbjct: 380 ---EIDKAFKLFESVKSEGDPVTWNSMISGCIQNHQHEGALKLYITMCRTSVERSRSTFS 436
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
++ C+ L + LG+ +H AI+ A + V ++I MYA+CG+I A F+SV
Sbjct: 437 ALFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDAQTSFASVCFP 496
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
++ ++ ++I G +HG +A +F+ M P+ T +G+LSACS AG+V +G F
Sbjct: 497 NVAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSCAGMVKEGMTVF 556
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
M+ Y + P HY CVVDLLGR G + EA IR IE +WGALL AC
Sbjct: 557 HSMEKCYGVIPTLEHYACVVDLLGRSGRLYEAEAF---IRCMPIEADRVIWGALLNACWF 613
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
++++GE ++V+ L+P Y+IL+ +Y G+ + + Q+ VKK GCS
Sbjct: 614 WMDLELGESVAKKVLSLDPKAISAYIILSNIYAKLGKWVEKINVRRQLMSLKVKKIRGCS 673
Query: 580 WIQINDGGHVFLSGDSSHP 598
WI +N+ VF +GD SHP
Sbjct: 674 WIDVNNKTCVFSAGDRSHP 692
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 211/498 (42%), Gaps = 83/498 (16%)
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
+++S N+ I V +DLA++ F EM R V SW IM++G + G+ EA L +M
Sbjct: 36 NIISTNIYISRHVRDGHLDLAQTLFNEMPVRSVVSWNIMISGYSKFGKYSEALNLASEMH 95
Query: 173 AKDVQ----AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV----NSRRID 224
+V+ ++ +++ +GC + + L ++++ + LV N I
Sbjct: 96 CNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDIS 155
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE 284
A F ++ + + W+ ++ ++ L+ +A K P ++ +WT +I Y
Sbjct: 156 GAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAY----- 210
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP-SPDNATFTSVLT 343
E++ + GL+ F M+ +G P+ TF SV+
Sbjct: 211 ------------------------ARSEHNC-KRGLELFCSMRMNGEVEPNEFTFDSVVR 245
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
C + L G+ +H K + +V +A+I Y +C I +A + S+ + +
Sbjct: 246 ACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDNAKAVYDSMERPCLKA 305
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
NS++ GL + G A E+F ++R + + +++ +L + +G ++ + F+ M
Sbjct: 306 SNSLLEGLIFAGRINDAEEIFCKLR----EKNPVSYNLMLKGYATSGRIEGSKRLFERMT 361
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG--------------------- 502
+K ++ ++ + R G ID+A L ++++G
Sbjct: 362 HK-----TTSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTWNSMISGCIQNHQHEGA 416
Query: 503 -----------IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTE 549
+E S + + AL AC I++G+ + E +S VY+ L +
Sbjct: 417 LKLYITMCRTSVERSRSTFSALFQACTCLEYIQLGQALHVHAIR-EAFDSNVYVGTSLID 475
Query: 550 MYLSCGRREDAKRIFAQM 567
MY CG DA+ FA +
Sbjct: 476 MYAKCGSIYDAQTSFASV 493
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 139/334 (41%), Gaps = 41/334 (12%)
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
SNI S I + G + A +F M R V WN+MI G + E L +M
Sbjct: 35 SNIISTNIYISRHVRDGHLDLAQTLFNEMPVRSVVSWNIMISGYSKFGKYSEALNLASEM 94
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA----- 381
+ + TF+S+L+IC+ G+Q H +K F V +A++ YA
Sbjct: 95 HCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDI 154
Query: 382 --------------------------RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+C + AL F +P D+++W ++I A
Sbjct: 155 SGAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYARSE 214
Query: 416 Y-AEKALELFERMRLT-DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSA 473
+ ++ LELF MR+ + +P++ TF V+ AC + G+ + KY +
Sbjct: 215 HNCKRGLELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGIL-TKYGFHFDHS 273
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV 533
+ ++ + ID A + + + ++ S ++ L+ A RI++ A E
Sbjct: 274 VCSALILFYCQCEAIDNAKAVYDSMERPCLKASNSLLEGLIFAGRIND-------AEEIF 326
Query: 534 MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+L N Y ++ + Y + GR E +KR+F +M
Sbjct: 327 CKLREKNPVSYNLMLKGYATSGRIEGSKRLFERM 360
>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 884
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 201/738 (27%), Positives = 336/738 (45%), Gaps = 129/738 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF------------NQMPE---- 49
+ +A+ +FD+MP R WN MI Y NG +A+ L+ + P
Sbjct: 132 LDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKA 191
Query: 50 ----RDM-------------------FTYNTVIAGLMQSDNVQGAKEVFDGMEVR-DVVT 85
RD+ F N +++ ++D++ A+ +FDG + + D V
Sbjct: 192 CAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL 251
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPL---------------------------------- 111
WNS++S Y +G E L +F M +
Sbjct: 252 WNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL 311
Query: 112 ------KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
++ N +I C +M AE ++M DV +W ++ G V+ EA
Sbjct: 312 KSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEAL 371
Query: 166 KLFDKMPA---------------------------------------KDVQAWNLMIAGY 186
+ F M A ++Q N +I Y
Sbjct: 372 EFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMY 431
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF----KQMPETCEKTWN 242
F +MHD+DL SW +I G + A+ F K+ E E
Sbjct: 432 SKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILG 491
Query: 243 SII---SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
SI+ SVL +VKE H ++ + + ++ Y + +G A +VFE + +D
Sbjct: 492 SILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKD 551
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
V W MI N E ++ F +M E+G S D+ +L+ + L L+ GR+IH
Sbjct: 552 VVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHC 611
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
++ +++ A++ MYA CG++QSA F + ++ + S+I HG +
Sbjct: 612 YLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKA 671
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A+ELF++MR + PD I+F+ +L ACS+AGL+D+GR + M+++Y L+P HY C+V
Sbjct: 672 AVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLV 731
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
D+LGR + EA + ++ E + VW ALL ACR H+ ++GEIA +R++ELEP
Sbjct: 732 DMLGRANCVVEAFEFVKMMKT---EPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPK 788
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
N G ++++ ++ GR D +++ A+MK +G++K PGCSWI+++ H F + D SHP+
Sbjct: 789 NPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPE 848
Query: 600 FHRLRYLLNLLHTEIERE 617
+ L+ + ++ERE
Sbjct: 849 SKEIYEKLSEVTRKLERE 866
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 137/290 (47%), Gaps = 27/290 (9%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G + +A K+FD+MP + AWN MI Y+ NG A L+ W + G
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALY----------WNMRVEG-- 177
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+ +S F + + C K + IR+G E HS L K Y + N +V
Sbjct: 178 ----VPLGLSSFPALLKACAKLRD------IRSG--SELHSLLVKLGYHSTGFIVNALVS 225
Query: 279 -YFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + ++ +A ++F+ + D +WN ++ + E L+ F +M +GP+P++
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 285
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT-VSNAMITMYARCGNIQSALLEFSS 395
T S LT C LG++IHA +K + + V NA+I MY RCG + A
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+ D+++WNS+I G + ++ALE F M K D+++ +++A
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 133/601 (22%), Positives = 237/601 (39%), Gaps = 134/601 (22%)
Query: 43 LFNQMPERDM-FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDE 101
+F P ++ F ++ + ++ A++VFD M R WN+MI YV NG
Sbjct: 106 IFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPAS 165
Query: 102 ALRVF-----HGMP---------------LKDVVSWN---------------LVIGALVN 126
AL ++ G+P L+D+ S + ++ ALV+
Sbjct: 166 ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVS 225
Query: 127 --CQRMDLAESY-----FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM----PA-- 173
+ DL+ + F+E G D W +++ G+ +E +LF +M PA
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKG--DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPN 283
Query: 174 --------------------KDVQA--------------WNLMIAGYLDNGCVGVAEDLF 199
K++ A N +IA Y G + AE +
Sbjct: 284 SYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERIL 343
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN-SIISVLIRNGLVK--- 255
++M++ D+ +W LI G V + A+ +F M K+ S+ S++ +G +
Sbjct: 344 RQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 403
Query: 256 ---EAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
E H+Y+ K+ + SN+ +I Y + + F M +D+ W +I G
Sbjct: 404 AGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYA 463
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+ND E L+ F + + D S+L S L ++ + ++IH ++ T
Sbjct: 464 QNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLD-TV 522
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
+ N ++ +Y +C N+ A F S+ D++SW S+I A +G +A+ELF RM T
Sbjct: 523 IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG 582
Query: 432 FKPDDITF-----------------------------------VGVLSACSYAGLVDQGR 456
D + V V+ + G + +
Sbjct: 583 LSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAK 642
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
FD ++ K LQ YT +++ G G A+ L +++R + + + ALL A
Sbjct: 643 AVFDRIERKGLLQ-----YTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYA 697
Query: 517 C 517
C
Sbjct: 698 C 698
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 108/274 (39%), Gaps = 43/274 (15%)
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN-QFTTVSNAMITMYARCGNIQSAL 390
SP A F VL +C + GRQ+H++ K + + ++ ++ MY +CG++ A
Sbjct: 78 SPVEA-FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAE 136
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS--- 447
F +P +WN++I +G AL L+ MR+ +F +L AC+
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 196
Query: 448 --------YAGLVDQG------------------------RYYFDCMKNKYFLQPRSAHY 475
++ LV G R FD + K + +
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK----GDAVLW 252
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
++ G E + L E+ G + + L AC + K+G+ V++
Sbjct: 253 NSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLK 312
Query: 536 LEPNNSGVYLI--LTEMYLSCGRREDAKRIFAQM 567
++S +Y+ L MY CG+ A+RI QM
Sbjct: 313 SSTHSSELYVCNALIAMYTRCGKMPQAERILRQM 346
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 180/569 (31%), Positives = 297/569 (52%), Gaps = 42/569 (7%)
Query: 43 LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGL 98
LF+++PE ++F +NT+I G + D Q ++ M R D T+ + G+ +
Sbjct: 74 LFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFT-RDI 132
Query: 99 IDEALRVFHGMPLKDVVSWNLVI-GALVN----CQRMDLAESYFKEMGARDVASWTIMVN 153
E R HG LK + +N+ + ALV C ++D A F DV +W ++++
Sbjct: 133 ALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIIS 192
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL 213
+ G+ E+R+LF M K V + + L + C + +DL + K+
Sbjct: 193 AYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVL-SACSKL----------KDLRTGKK- 240
Query: 214 INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWT 273
++ V + ++++ + N++I + G + A +I SWT
Sbjct: 241 VHSYVKNCKVESNLVL-----------ENAMIDMYADCGEMDSALGIFRSMNNRDIISWT 289
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++ G+ +GE+ A F+ M +D W MI G ++ +E L+ F M+ + P
Sbjct: 290 TIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKP 349
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMYARCGNIQSAL 390
D T SVLT C+ L L+LG I I RN+ V NA+I MY +CG++ A
Sbjct: 350 DEFTMVSVLTACAHLGALELGEWIRTY---IDRNKIKNDLFVRNALIDMYFKCGDVDKAE 406
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F + D +W ++I GLA +G+ EKAL++F M PD+IT++GVLSAC++ G
Sbjct: 407 SIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTG 466
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
LVD+GR YF M +++ ++P AHY C+VDLL R G + EA ++ + I+ + VW
Sbjct: 467 LVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENM---PIKANSIVW 523
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
GALL CR++ + E+ ++++ELEP+N VY++L +Y +C R D + + M +
Sbjct: 524 GALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDK 583
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
G+KK PGCS I++N H F++GD SHP+
Sbjct: 584 GIKKTPGCSLIEMNGRVHEFVAGDRSHPQ 612
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 133/539 (24%), Positives = 209/539 (38%), Gaps = 137/539 (25%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER---------- 50
Q A+ LFD++P+ + WN MIRGY + F + L+ +M P+R
Sbjct: 69 QYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGF 128
Query: 51 -----------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWN 87
++F + ++ + + A+ VFD DV+TWN
Sbjct: 129 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 188
Query: 88 SMISGYVCNGLIDEALRVFHGM--------------------PLKDV------------- 114
+IS Y G +E+ R+F M LKD+
Sbjct: 189 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 248
Query: 115 -VSWNLV-----IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
V NLV I +C MD A F+ M RD+ SWT +V+G G I AR F
Sbjct: 249 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYF 308
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
DKMP KD +W MI GY + S R A+
Sbjct: 309 DKMPEKDYVSWTAMIDGY-------------------------------IRSNRFKEALE 337
Query: 229 YFKQMPETCEK----TWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YF 280
F+ M T K T S+++ G ++ +Y+++ N N ++ YF
Sbjct: 338 LFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYF 397
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G+V A +F M+ RD W MI GL N GE+ L F M ++ PD T+
Sbjct: 398 KCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIG 457
Query: 341 VLTICSDLPTLDLGRQI-------HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
VL+ C+ +D GR+ H IA ++ + AR G ++ A
Sbjct: 458 VLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH------YGCLVDLLARAGRLKEAYEVI 511
Query: 394 SSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD----ITFVGVLSACS 447
++PI + I W +++ G Y E + ++ + +PD+ + + +AC
Sbjct: 512 ENMPIKANSIVWGALLAGCRV--YRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACK 568
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 174/399 (43%), Gaps = 65/399 (16%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMF----TYNTVI 59
++ A+ +FD P+ D +TWN++I Y K G + + LF M ++ + T V+
Sbjct: 167 GQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVL 226
Query: 60 AGLMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+ + +++ K+V ++ ++V N+MI Y G +D AL +F M +D++
Sbjct: 227 SACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDII 286
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
SW ++ N +D+A +YF +M +D SWT M++G +R R EA +LF M A +
Sbjct: 287 SWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATN 346
Query: 176 VQA----------------------W-----------------NLMIAGYLDNGCVGVAE 196
V+ W N +I Y G V AE
Sbjct: 347 VKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAE 406
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNG 252
+F++M RD +W +I GL + + A+ F M + E T+ ++S G
Sbjct: 407 SIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTG 466
Query: 253 LVKEAHSYLEKYPYS-----NIASWTNVIVGYFEMGEVGSAIKVFELMTTR-DVTVWNVM 306
LV + Y + NIA + ++ G + A +V E M + + VW +
Sbjct: 467 LVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGAL 526
Query: 307 IFGL---GENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
+ G E+D+ E +K ++++ PDN +L
Sbjct: 527 LAGCRVYRESDMAEMVVKQILELE-----PDNGAVYVLL 560
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 126/295 (42%), Gaps = 8/295 (2%)
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
E G+ A ++F+ + ++ +WN MI G D + G+ +++M G PD TF
Sbjct: 64 EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPF 123
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
+ + L+ GRQ+H +K V A++ MY CG + +A F P D
Sbjct: 124 LFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKAD 183
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+I+WN II G E++ LF M P +T V VLSACS + G+
Sbjct: 184 VITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHS 243
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
+KN ++ ++D+ G +D A+ + + I W ++
Sbjct: 244 YVKNCK-VESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDI----ISWTTIVSG---F 295
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
N+ ++A ++ + + + + Y+ R ++A +F M+ VK +
Sbjct: 296 TNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPD 350
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 110/289 (38%), Gaps = 43/289 (14%)
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA--RCGNIQSA 389
SP S+L C ++D +Q+H QAIK N + N ++T G+ Q A
Sbjct: 15 SPPTHPLISLLETCE---SMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYA 71
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F +P ++ WN++I G + + + + L+ M KPD TF + +
Sbjct: 72 RRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRD 131
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI-RADGI----- 503
++ GR + K+ LQ +T +V + G +D A + + +AD I
Sbjct: 132 IALEYGRQLHGHVL-KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 190
Query: 504 -----------------------EVSPTVWG--ALLGACRIHNNIKVGEIAGERVMELEP 538
+V PT +L AC +++ G+ V +
Sbjct: 191 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKV 250
Query: 539 NNSGVYL-ILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
++ V + +MY CG + A IF M + SW I G
Sbjct: 251 ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDI-----ISWTTIVSG 294
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/386 (38%), Positives = 225/386 (58%), Gaps = 4/386 (1%)
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW 272
L++ N+ +I A F +M E W ++ISV R G + A ++ P N ASW
Sbjct: 51 LVDFYGNAGKIVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASW 110
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+I GY + V SA +F M RD+ W MI +N E L F +M+ +G
Sbjct: 111 NAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGID 170
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD T ++++ C+ L LDLG++IH A+++ + + +A+I MYA+CG++ +L+
Sbjct: 171 PDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVV 230
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F + ++ WNSII GLA HGYAE+AL +F RM+ KP+ +TF+ VL AC++AGLV
Sbjct: 231 FFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLV 290
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
++GR F M + + P HY C+VDLLG+ GL+++A+ L+ +R +E + +WGA
Sbjct: 291 EEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMR---MEPNSVIWGA 347
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LLG C++H N+K+ ++A LEPNNSG Y +L MY R + I A MKE GV
Sbjct: 348 LLGGCKLHRNLKIAQVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGV 407
Query: 573 KK-EPGCSWIQINDGGHVFLSGDSSH 597
+K PG SWI+++ H F + D SH
Sbjct: 408 EKTSPGSSWIEMDRKIHQFAASDKSH 433
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 194/435 (44%), Gaps = 55/435 (12%)
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
N ++ A F EM RDV +WT M++ R G + AR+LFD+MP ++ +WN MI G
Sbjct: 57 NAGKIVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDG 116
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTW 241
Y V AE LF +M +RD+ SW +I +++ A++ F +M + E T
Sbjct: 117 YSRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTM 176
Query: 242 NSIISVLIRNG---LVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
+IIS G L KE H Y + + ++ + +I Y + G + ++ VF +
Sbjct: 177 ATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRK 236
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
+++ WN +I GL + EE L F +M+ P+ TF SVL C+
Sbjct: 237 KNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACT----------- 285
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
HA ++ R +F ++S +FS P +I + ++ L G
Sbjct: 286 HAGLVEEGRKRFLSMSR-----------------DFSIPP--EIEHYGCMVDLLGKAGLL 326
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP-RSAHYT 476
E ALEL MR+ +P+ + + +L C + + + K L+P S +YT
Sbjct: 327 EDALELVRSMRM---EPNSVIWGALLGGCKLHRNLKIAQVAVNESK---VLEPNNSGYYT 380
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIE-VSPTVWGALLGACRIHNNIKVGEIAGERVME 535
+V++ E N+ ++ G+E SP G+ I + K+ + A
Sbjct: 381 LLVNMYAEVNRWSEVANIRATMKELGVEKTSP-------GSSWIEMDRKIHQFAASDKSH 433
Query: 536 LEPNNSGVYLILTEM 550
L + +Y +L E+
Sbjct: 434 LASDE--IYTLLVEL 446
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 8/208 (3%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+I EA+ +FD+M +RD W MI + + G + +A LF++MP R+ ++N +I G
Sbjct: 59 GKIVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYS 118
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNL 119
+ NV+ A+ +F M RD+++W +MI+ Y N EAL VF+ M D V+
Sbjct: 119 RLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMAT 178
Query: 120 VIGALVNCQRMDLAES---YFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
+I A + +DL + Y EMG DV + +++ + G + ++ +F K+ K+
Sbjct: 179 IISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKN 238
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
+ WN +I G +G A +F +M
Sbjct: 239 LFCWNSIIEGLAVHGYAEEALAMFSRMQ 266
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 93/184 (50%), Gaps = 8/184 (4%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R + A+ LFD+MP R+T +WN MI GY + +++A LF+QMP RD+ ++ T+IA
Sbjct: 88 RTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIAC 147
Query: 62 LMQSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRV-FHGMPLK---D 113
Q+ + A VF+ M+ D VT ++IS G +D + + M + D
Sbjct: 148 YSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLD 207
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
V + +I C +D + F ++ +++ W ++ GL G EA +F +M
Sbjct: 208 VYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQR 267
Query: 174 KDVQ 177
+ ++
Sbjct: 268 EKIK 271
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 20/243 (8%)
Query: 31 YFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMI 90
Y G + A +F++M ERD+F + T+I+ ++ ++ A+++FD M VR+ +WN+MI
Sbjct: 55 YGNAGKIVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMI 114
Query: 91 SGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVA 146
GY ++ A +F MP +D++SW +I ++ A + F EM D
Sbjct: 115 DGYSRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEV 174
Query: 147 SWTIMVNGLVREGRIVEARKL--------FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+ +++ G + +++ FD DV + +I Y G + + +
Sbjct: 175 TMATIISACAHLGALDLGKEIHLYAMEMGFD----LDVYIGSALIDMYAKCGSLDKSLVV 230
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV 254
F K+ ++L W +I GL + A++ F +M K T+ S++ GLV
Sbjct: 231 FFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLV 290
Query: 255 KEA 257
+E
Sbjct: 291 EEG 293
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 200/656 (30%), Positives = 323/656 (49%), Gaps = 69/656 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+R +QEA + + + + ++ + G L A + M + DMF
Sbjct: 58 LRTLDVQEAMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVAT 117
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+++ M+ + A+ +FDGM R+VVTW ++++GY N L VF M
Sbjct: 118 SLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP 177
Query: 117 WNLVIGALVN-----CQRMDLAES---YFKEMGARDVASWTIMVNGL----VREGRIVEA 164
+ +GA +N C +DL + Y + GA + S M N L + G + A
Sbjct: 178 SHYTLGATLNACLASCD-VDLGKQVHGYAIKYGAESITS---MGNSLCSLYAKLGSLDSA 233
Query: 165 RKLFDKMPAKDVQAWNLMIAGYL-DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
+ F ++P K+V W MI+ D CV + LF M L++G+
Sbjct: 234 LRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDM----------LMDGV------ 277
Query: 224 DAAISYFKQMPETCEKTWNSIISVL---IRNGLVKEAHSYLEKYP-YSNIASWTNVIVGY 279
MP E T S++S+ + L K+ ++ K +N+ + + Y
Sbjct: 278 ---------MPN--EFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLY 326
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE------NDL-----GEEGLKFFVQMKE 328
GE A+++FE M + WN MI G + +DL G + L F +K
Sbjct: 327 LRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKR 386
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
S PD TF+S+L++CS + L+ G QIHAQ IK V++A++ MY +CG IQ
Sbjct: 387 SVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQD 446
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F +P ++W S+I G + HG ++A++LFE MRL +P++ITFV +LSACSY
Sbjct: 447 ANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSY 506
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
AGLV++ +YFD MK +Y ++P HY C++D+ R G +++A + I+ G E +
Sbjct: 507 AGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF---IKRTGFEPNEA 563
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+W +L+ CR H N+++ A ++++EL+P Y++L MY+S R +D R+ MK
Sbjct: 564 IWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMK 623
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL-NLLHTEIEREILFDAY 623
+ V SWI I D + F + D +HP+ L LL NLL E + I ++ Y
Sbjct: 624 QEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLL--EKAKAIGYEPY 677
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 191/662 (28%), Positives = 314/662 (47%), Gaps = 83/662 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM------------- 52
++ A+ +FD+ Q + N M+ GY ++G + LF M R++
Sbjct: 80 LEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKA 139
Query: 53 --------------------------FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
F +++I+ L++ + A+ VFDGM +DVV W
Sbjct: 140 CASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCW 199
Query: 87 NSMISGYVCNGLIDEALRVF---HGMPLK----DVVSWNLVIGALVNCQRMDLAESYFKE 139
NS+I GYV G D A ++F HG +K + S G + N + Y
Sbjct: 200 NSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLG 259
Query: 140 MG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+G D+ T V+ + G I AR +F KMP +++ +WN MI+G + NG VG + DL
Sbjct: 260 LGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDL 319
Query: 199 FQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
F ++ DLT+ L+ G C +T + ++ +
Sbjct: 320 FHRLVRSSGGFDLTTIVSLLQG--------------------CSQTASLATGKILHGCAI 359
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+ S N+ T ++ Y + G + A VF M R+V W M+ GL +N
Sbjct: 360 RSFES--------NLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNG 411
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
E+ L+ F QM+E G + ++ TF S++ C+ L +L GR IH ++
Sbjct: 412 HAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMT 471
Query: 375 AMITMYARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
A++ MYA+CG I A FS I D++ WNS+I G HG+ +A+ ++ +M K
Sbjct: 472 ALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLK 531
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
P+ TF+ +LSACS++ LV+QG F+ M+ + ++P HY C+VDLL R G +EA
Sbjct: 532 PNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQA 591
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
L+ ++ + V ALL CR H NI +G ++++ L+ N G+Y++L+ +Y
Sbjct: 592 LIEKMP---FQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAE 648
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
R + I M+ G+KK PG S ++ + H F +GD+SHP + + + L L +
Sbjct: 649 ARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSA 708
Query: 614 IE 615
+E
Sbjct: 709 VE 710
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 208/492 (42%), Gaps = 107/492 (21%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+I EAQ +FD MP +D V WN +I GY + G D A LF +M + + L+
Sbjct: 179 GKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLI 238
Query: 64 QS---------------------------------------DNVQGAKEVFDGMEVRDVV 84
Q+ +++ A+ VF M R++V
Sbjct: 239 QACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLV 298
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL--VIGALVNC-QRMDLAESYFKEMG 141
+WN+MISG V NGL+ E+ +FH + ++ ++L ++ L C Q LA
Sbjct: 299 SWNAMISGCVRNGLVGESFDLFHRL-VRSSGGFDLTTIVSLLQGCSQTASLATGKILHGC 357
Query: 142 A-RDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
A R S I+ +V + G + +A +F++M ++V W M+ G NG A
Sbjct: 358 AIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDAL 417
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
LF +M + I A F + +C + ++ G +
Sbjct: 418 RLFAQMQEEG----------------IAANSVTFVSLVHSCAHLGS------LKRG--RS 453
Query: 257 AHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMT-TRDVTVWNVMIFGLGEND 314
H +L + ++ +I + T ++ Y + G++ A ++F + ++DV +WN MI G G +
Sbjct: 454 IHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHG 513
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
G + + + +M E G P+ TF S+L+ CS H++ ++ Q ++ N
Sbjct: 514 HGYQAVGIYHKMIEEGLKPNQTTFLSLLSACS-----------HSRLVE----QGISLFN 558
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
+M R NI+ PI + ++ L+ G E+A L E+M F+P
Sbjct: 559 SM----ERDHNIR---------PIEK--HYACLVDLLSRAGRFEEAQALIEKM---PFQP 600
Query: 435 DDITFVGVLSAC 446
+LS C
Sbjct: 601 GTAVLEALLSGC 612
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 137/337 (40%), Gaps = 44/337 (13%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T ++ Y ++ + +A VF+ + N M+ G ++ E L+ F M+
Sbjct: 68 TKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLE 127
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
D+ + T L C+ ++G +I + A++ + V ++MI+ + G I A
Sbjct: 128 VDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRV 187
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC------ 446
F +P D++ WNSII G G + A +LF M + KP IT ++ AC
Sbjct: 188 FDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNL 247
Query: 447 -----------------------------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
S G ++ R+ F M + + + C
Sbjct: 248 KLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGC 307
Query: 478 VVDLLGRFGLIDEAMNLLNEI--RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
V R GL+ E+ +L + + + G +++ V +LL C ++ G+I +
Sbjct: 308 V-----RNGLVGESFDLFHRLVRSSGGFDLTTIV--SLLQGCSQTASLATGKILHGCAIR 360
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+N + + ++Y CG + A +F +MK+ V
Sbjct: 361 SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNV 397
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 229/375 (61%), Gaps = 7/375 (1%)
Query: 243 SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
+++ + R G +++A +K + +W +I G+ + ++ A+K+F M+ RDV
Sbjct: 50 ALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVS 109
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
W +I G +N G+E L F QM+++G D SVL+ C+DL L+LGRQ HA +
Sbjct: 110 WTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVV 169
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
+ V +A++ MYA+ G+++ A F +P + +SWNSII G A HG A+
Sbjct: 170 QSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVL 229
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
LFE+M KP++I+FVGVLSACS+ GLV++GR YF+ M Y + P +HYTC++DLL
Sbjct: 230 LFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLL 289
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSP--TVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
GR G +DEA N +N G+ V P +VWGALLGACRIH N ++ + E ++ +E
Sbjct: 290 GRAGCLDEAENFIN-----GMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQI 344
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
+G+Y++L+ +Y + G+ +DA ++ MK+ GV K+PG SWI++ H F++G++SHP+
Sbjct: 345 AGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQL 404
Query: 601 HRLRYLLNLLHTEIE 615
+ L L +++
Sbjct: 405 KEIHEFLESLSRKMK 419
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 159/321 (49%), Gaps = 19/321 (5%)
Query: 7 QEAQNLFDKMP-QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++A N KM + D V ++ Y + G L++A +F++M ER T+N +I G Q+
Sbjct: 30 KQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQN 89
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
+++ A ++F M RDVV+W ++I+GY NG DE+L VF+ M + S ++G+++
Sbjct: 90 RDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVL 149
Query: 126 N-CQRMDLAE------SYFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
+ C + E +Y + G A D+ + +V+ + G + +A ++FDKMP ++
Sbjct: 150 SACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEV 209
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQM 233
+WN +I G +G A LF++M + S+ +++ ++ ++ YF M
Sbjct: 210 SWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLM 269
Query: 234 PETCE-----KTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGS 287
+ + +I +L R G + EA +++ P +++ W ++ G
Sbjct: 270 TQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTEL 329
Query: 288 AIKVFELMTTRDVTVWNVMIF 308
A ++ E + +V + + +
Sbjct: 330 AKRIAEHLLGMEVQIAGIYVL 350
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 46/251 (18%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M G P+ T ++V+ C+ + +L+ G+Q H IK+ V A++ MYARCG+
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 386 IQ-------------------------------SALLEFSSVPIHDIISWNSIICGLAYH 414
++ AL F + D++SW ++I G A +
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
GY +++L +F +MR T K D VLSAC+ ++ GR + + Y +Q A
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQF-----HAYVVQSGFAL 175
Query: 475 ----YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
+ +VD+ + G +++A + +++ EVS W +++ C H +
Sbjct: 176 DIVVGSALVDMYAKSGSMEDACQVFDKMPQRN-EVS---WNSIITGCAQHGRGNDAVLLF 231
Query: 531 ERVME--LEPN 539
E++++ ++PN
Sbjct: 232 EQMLQAGIKPN 242
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 190/642 (29%), Positives = 314/642 (48%), Gaps = 60/642 (9%)
Query: 24 WNVMIRGYFKNGFLDNAMCLFNQM------PER--------------------------- 50
+N +IRGY +G + A+ LF +M P++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 51 ------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALR 104
D+F N+++ + + A++VFD M R+VV+W SMI GY +A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 105 VFHGMPLKDVVSWN-----LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV--- 156
+F M + V+ N VI A + ++ E + + + +MV+ LV
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 157 -REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWK 211
+ I A++LFD+ A ++ N M + Y+ G A +F M D D S
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI----RNGLVKEAHSYLEKYPYS 267
I+ R I S + ++W++I + LI + A ++
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
+ +W +++ GY E GEV +A + FE M +++ WN +I GL + L EE ++ F M+
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 328 -ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
+ G + D T S+ + C L LDL + I+ K + ++ M++RCG+
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
+SA+ F+S+ D+ +W + I +A G AE+A+ELF+ M KPD + FVG L+AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
S+ GLV QG+ F M + + P HY C+VDLLGR GL++EA+ L+ ++ +E +
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM---PMEPN 638
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
+W +LL ACR+ N+++ A E++ L P +G Y++L+ +Y S GR D ++
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 567 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
MKE G++K PG S IQI H F SGD SHP+ + +L+
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLD 740
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 217/484 (44%), Gaps = 61/484 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNT-----VIA 60
+ A+ +FD+M +R+ V+W MI GY + F +A+ LF +M + T N+ VI+
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244
Query: 61 GLMQSDNVQGAKEVF-----DGMEVRDVVT------------------------------ 85
+ ++++ ++V+ G+EV D++
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQRMD---LAESYFKEMG 141
N+M S YV GL EAL VF+ M V + ++ A+ +C ++ +S +
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 142 ARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
SW + N L+ + R A ++FD+M K V WN ++AGY++NG V A +
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM--PETCEKTWNSIISVLIRNG--- 252
F+ M ++++ SW +I+GLV + AI F M E +++S+ G
Sbjct: 425 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 253 ---LVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
L K + Y+EK ++ T ++ + G+ SA+ +F +T RDV+ W I
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
+ E ++ F M E G PD F LT CS + G++I +K+
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 369 FTTVS-NAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYHGYAEKALELFE 425
V M+ + R G ++ A+ +P+ +D+I WNS++ G E A E
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMAAYAAE 663
Query: 426 RMRL 429
++++
Sbjct: 664 KIQV 667
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 158/357 (44%), Gaps = 39/357 (10%)
Query: 254 VKEAHSYLEKYPYSN-IASWTNVIVGYFEMGEVGS---AIKVFELMTTRDVT-VWNVMIF 308
+K H L K N +++ T ++ E+G S A +VFE + ++N +I
Sbjct: 48 LKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIR 107
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
G + L E + F++M SG SPD TF L+ C+ G QIH +K+ +
Sbjct: 108 GYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAK 167
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM- 427
V N+++ YA CG + SA F + +++SW S+ICG A +A+ A++LF RM
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
R + P+ +T V V+SAC+ ++ G + ++N ++ + +VD+ +
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG-IEVNDLMVSALVDMYMKCNA 286
Query: 488 IDEAMNLLNEIRADGIEVSPTV------WGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
ID A L +E A +++ + G A + N + + +R+ L +S
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 542 GVYL--------------------------ILTEMYLSCGRREDAKRIFAQMKENGV 572
L L +MY+ C R++ A RIF +M V
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 21/283 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ R A +FD+M + VTWN ++ GY +NG +D A F MPE+++ ++NT+I+
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 61 GLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFH-----GMP 110
GL+Q + A EVF M+ + D VT S+ S G +D A +++ G+
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ 502
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
L DV ++ C + A S F + RDV++WT + + G A +LFD
Sbjct: 503 L-DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDD 561
Query: 171 MPAKDVQAWNLMIAGYL----DNGCVGVAEDLFQ---KMH--DRDLTSWKQLINGLVNSR 221
M + ++ + G L G V +++F K+H + + +++ L +
Sbjct: 562 MIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAG 621
Query: 222 RIDAAISYFKQMP-ETCEKTWNSIISVLIRNGLVKEAHSYLEK 263
++ A+ + MP E + WNS+++ G V+ A EK
Sbjct: 622 LLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 136/376 (36%), Gaps = 93/376 (24%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER-DMF 53
M+ I A+ LFD+ + N M Y + G A+ +FN M P+R M
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 54 TY--------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVR 81
+ N +I M+ A +FD M +
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
VVTWNS+++GYV NG +D A F MP K++VSWN +I LV + A F M
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 141 ----------------------GARDVASW-----------------TIMVNGLVREGRI 161
GA D+A W T +V+ R G
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
A +F+ + +DV AW I G A +LF M ++ L G + +
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 222 RIDAAISYFKQM-----------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NI 269
+ K++ PE + + ++ +L R GL++EA +E P N
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPE--DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 270 ASWTNVIVGYFEMGEV 285
W +++ G V
Sbjct: 640 VIWNSLLAACRVQGNV 655
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 201/639 (31%), Positives = 322/639 (50%), Gaps = 34/639 (5%)
Query: 8 EAQNLFDKMPQRDTVT-WNVMIRGYFKNGFLDNAMCLFNQM---P--ERDMFTYNTVIAG 61
A+ +FD M ++ WN ++ GY KN A+ LF ++ P + D +TY +V+
Sbjct: 56 HAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKA 115
Query: 62 LMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
K + + + D+V +S++ Y ++A+ +F+ MP KDV W
Sbjct: 116 CGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACW 175
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE-GRIVEARK-------LFD 169
N VI A YF M ++ + + R+++ + L +
Sbjct: 176 NTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELIN 235
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
D + ++ Y G + +A ++F++M + + +W +I+G + I
Sbjct: 236 SGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQL 295
Query: 230 FKQMPETCEK----TWNSIISVLIRNGLVKEA---HSY-LEKYPYSNIASWTNVIVGYFE 281
FK+M K T +S+I V R+ + E H Y + S++ ++++ YF+
Sbjct: 296 FKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFK 355
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
G+V A +F+L+ V WNVMI G E L F +M++S PD TFTSV
Sbjct: 356 CGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSV 415
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
LT CS L L+ G +IH I+ + V A++ MYA+CG + A F +P D+
Sbjct: 416 LTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDL 475
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
+SW S+I HG A ALELF M ++ KPD +TF+ +LSAC +AGLVD+G YYF+
Sbjct: 476 VSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQ 535
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN---EIRADGIEVSPTVWGALLGACR 518
M N Y + PR HY+C++DLLGR G + EA +L EIR D +E+ T L ACR
Sbjct: 536 MVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIR-DDVELLST----LFSACR 590
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
+H NI +G +++ +P++S Y++L+ MY S + ++ + + ++MKE G+KK PGC
Sbjct: 591 LHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGC 650
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
SWI+IN F D+SH + L+ L +E E
Sbjct: 651 SWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMEDE 689
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 137/322 (42%), Gaps = 60/322 (18%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM--------- 52
+ ++ A +F++MP++ V WN MI GY G + + LF +M +
Sbjct: 254 KCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSS 313
Query: 53 ---------------FTYNTVIAGLMQSD---------------NVQGAKEVFDGMEVRD 82
F + I +QSD V+ A+ +F +
Sbjct: 314 LIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSK 373
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFK 138
VV+WN MISGYV G + EAL +F M D +++ V+ A ++ E
Sbjct: 374 VVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHN 433
Query: 139 EMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ + + + +++ L+ + G + EA +F +P +D+ +W MI Y +G V
Sbjct: 434 LIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYV 493
Query: 195 AEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQM-------PETCEKTWNS 243
A +LF +M D ++ +++ ++ +D YF QM P + ++
Sbjct: 494 ALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRV--EHYSC 551
Query: 244 IISVLIRNGLVKEAHSYLEKYP 265
+I +L R G + EA+ L++ P
Sbjct: 552 LIDLLGRAGRLHEAYEILQQNP 573
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 189/621 (30%), Positives = 318/621 (51%), Gaps = 43/621 (6%)
Query: 10 QNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGLMQS 65
+ + + + D T+ V+++ + G LD + E D++T N+++A +
Sbjct: 96 RGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKL 155
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGA 123
V+ A+ VFDGM VRD+VTWN+M+ GYV NGL AL F M V + V I A
Sbjct: 156 GLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAA 215
Query: 124 LVNCQRMDLAESYFKEMGA--------RDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
L C ++++ KE+ +D+ T +++ + G + AR +F MP +
Sbjct: 216 LAACC-LEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRT 274
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
V WN MI GY N A D F +M L + AI+
Sbjct: 275 VVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQV------------EVVTAINLLA---- 318
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFEL 294
C +T +S+ + H Y+ + + ++ T ++ Y ++G+V S+ K+F
Sbjct: 319 ACAQTESSLYG--------RSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGK 370
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+ + + WN MI ++ E + F+++ PD T ++V+ L +L
Sbjct: 371 IANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHC 430
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
RQIH+ I + + T + NA++ MYAR G++ ++ F + D+ISWN++I G A H
Sbjct: 431 RQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIH 490
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
G + ALE+F+ M+ +P++ TFV VL+ACS +GLVD+G +F+ M +Y + P+ H
Sbjct: 491 GQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEH 550
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM 534
Y C+ DLLGR G + E + + + I+ + VWG+LL A R N+I + E A ER+
Sbjct: 551 YGCMTDLLGREGDLREVLQFIESM---PIDPTSRVWGSLLTASRNQNDIDIAEYAAERIF 607
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
+LE +N+G Y++L+ MY GR ED +R+ MKE G+++ S ++++ F +GD
Sbjct: 608 QLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGD 667
Query: 595 SSHPKFHRLRYLLNLLHTEIE 615
SH + + + N+L +IE
Sbjct: 668 MSHSQSRTIHEVSNILSRKIE 688
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 139/333 (41%), Gaps = 38/333 (11%)
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
S +++V G + A++ + D + NVMI G + L L + M E
Sbjct: 42 GSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLED 101
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G PD TF V+ C+ L LD GR H IK+ N+++ YA+ G ++ A
Sbjct: 102 GARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDA 161
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR-LTDFKPDDITFVGVLSACSY 448
F +P+ DI++WN+++ G +G AL F+ M + + D + + L+AC
Sbjct: 162 ERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCL 221
Query: 449 AGLVDQGR-----------------------YYFDCMKNKYFLQPRSAHYTCVVD----- 480
QG+ Y C + Y RS T +
Sbjct: 222 EVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAY---ARSVFATMPLRTVVTW 278
Query: 481 --LLGRFGL---IDEAMNLLNEIRADGIEVSPTVWGALLGAC-RIHNNIKVGEIAGERVM 534
++G + L DEA + ++RA+G++V LL AC + +++ + G V
Sbjct: 279 NCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVR 338
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ + L EMY G+ E +++IF ++
Sbjct: 339 RQFLPHVVLETALLEMYGKVGKVESSEKIFGKI 371
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 82/209 (39%), Gaps = 60/209 (28%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R+ + ++ +FDKM +D ++WN MI GY +G A+ +F++M YN G
Sbjct: 458 RSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEM------KYN----G 507
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
L +++ T+ S+++ +GL+DE F+ M
Sbjct: 508 LQPNES-----------------TFVSVLTACSVSGLVDEGWMHFNLM------------ 538
Query: 122 GALVNCQRMDLAESYFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV-QAW 179
+E G + + M + L REG + E + + MP + W
Sbjct: 539 ---------------LQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVW 583
Query: 180 NLMIAGYLDNGCVGV----AEDLFQKMHD 204
++ + + + AE +FQ HD
Sbjct: 584 GSLLTASRNQNDIDIAEYAAERIFQLEHD 612
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 190/642 (29%), Positives = 314/642 (48%), Gaps = 60/642 (9%)
Query: 24 WNVMIRGYFKNGFLDNAMCLFNQM------PER--------------------------- 50
+N +IRGY +G + A+ LF +M P++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 51 ------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALR 104
D+F N+++ + + A++VFD M R+VV+W SMI GY +A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 105 VFHGMPLKDVVSWN-----LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV--- 156
+F M + V+ N VI A + ++ E + + + +MV+ LV
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 157 -REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWK 211
+ I A++LFD+ A ++ N M + Y+ G A +F M D D S
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI----RNGLVKEAHSYLEKYPYS 267
I+ R I S + ++W++I + LI + A ++
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
+ +W +++ GY E GEV +A + FE M +++ WN +I GL + L EE ++ F M+
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 328 -ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
+ G + D T S+ + C L LDL + I+ K + ++ M++RCG+
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
+SA+ F+S+ D+ +W + I +A G AE+A+ELF+ M KPD + FVG L+AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
S+ GLV QG+ F M + + P HY C+VDLLGR GL++EA+ L+ ++ +E +
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM---PMEPN 638
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
+W +LL ACR+ N+++ A E++ L P +G Y++L+ +Y S GR D ++
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 567 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
MKE G++K PG S IQI H F SGD SHP+ + +L+
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLD 740
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 217/484 (44%), Gaps = 61/484 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNT-----VIA 60
+ A+ +FD+M +R+ V+W MI GY + F +A+ LF +M + T N+ VI+
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244
Query: 61 GLMQSDNVQGAKEVF-----DGMEVRDVVT------------------------------ 85
+ ++++ ++V+ G+EV D++
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQRMD---LAESYFKEMG 141
N+M S YV GL EAL VF+ M V + ++ A+ +C ++ +S +
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 142 ARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
SW + N L+ + R A ++FD+M K V WN ++AGY++NG V A +
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM--PETCEKTWNSIISVLIRNG--- 252
F+ M ++++ SW +I+GLV + AI F M E +++S+ G
Sbjct: 425 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 253 ---LVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
L K + Y+EK ++ T ++ + G+ SA+ +F +T RDV+ W I
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
+ E ++ F M E G PD F LT CS + G++I +K+
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 369 FTTVS-NAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYHGYAEKALELFE 425
V M+ + R G ++ A+ +P+ +D+I WNS++ G E A E
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMAAYAAE 663
Query: 426 RMRL 429
++++
Sbjct: 664 KIQV 667
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 158/357 (44%), Gaps = 39/357 (10%)
Query: 254 VKEAHSYLEKYPYSN-IASWTNVIVGYFEMGEVGS---AIKVFELMTTRDVT-VWNVMIF 308
+K H L K N +++ T ++ E+G S A +VFE + ++N +I
Sbjct: 48 LKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIR 107
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
G + L E + F++M SG SPD TF L+ C+ G QIH +K+ +
Sbjct: 108 GYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAK 167
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM- 427
V N+++ YA CG + SA F + +++SW S+ICG A +A+ A++LF RM
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
R + P+ +T V V+SAC+ ++ G + ++N ++ + +VD+ +
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG-IEVNDLMVSALVDMYMKCNA 286
Query: 488 IDEAMNLLNEIRADGIEVSPTV------WGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
ID A L +E A +++ + G A + N + + +R+ L +S
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 542 GVYL--------------------------ILTEMYLSCGRREDAKRIFAQMKENGV 572
L L +MY+ C R++ A RIF +M V
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 21/283 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ R A +FD+M + VTWN ++ GY +NG +D A F MPE+++ ++NT+I+
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 61 GLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFH-----GMP 110
GL+Q + A EVF M+ + D VT S+ S G +D A +++ G+
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ 502
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
L DV ++ C + A S F + RDV++WT + + G A +LFD
Sbjct: 503 L-DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDD 561
Query: 171 MPAKDVQAWNLMIAGYL----DNGCVGVAEDLFQ---KMH--DRDLTSWKQLINGLVNSR 221
M + ++ + G L G V +++F K+H + + +++ L +
Sbjct: 562 MIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAG 621
Query: 222 RIDAAISYFKQMP-ETCEKTWNSIISVLIRNGLVKEAHSYLEK 263
++ A+ + MP E + WNS+++ G V+ A EK
Sbjct: 622 LLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 136/376 (36%), Gaps = 93/376 (24%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER-DMF 53
M+ I A+ LFD+ + N M Y + G A+ +FN M P+R M
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 54 TY--------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVR 81
+ N +I M+ A +FD M +
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM- 140
VVTWNS+++GYV NG +D A F MP K++VSWN +I LV + A F M
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 141 ----------------------GARDVASW-----------------TIMVNGLVREGRI 161
GA D+A W T +V+ R G
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
A +F+ + +DV AW I G A +LF M ++ L G + +
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 222 RIDAAISYFKQM-----------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NI 269
+ K++ PE + + ++ +L R GL++EA +E P N
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPE--DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 270 ASWTNVIVGYFEMGEV 285
W +++ G V
Sbjct: 640 VIWNSLLAACRVQGNV 655
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 198/611 (32%), Positives = 310/611 (50%), Gaps = 55/611 (9%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR---DVVTWNSMISGYVCNGLIDEALRV 105
E ++F N +++ + + A++VFD M R D+V+WNS+++ Y+ G A+++
Sbjct: 158 EWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKM 217
Query: 106 FHGMP-----LKDVVSWNLVIGALVNC---QRMDLAESYFKEMGA-RDVASWTIMVNGLV 156
F M D VS V+ A + R Y G DV +V+
Sbjct: 218 FERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYA 277
Query: 157 REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQ 212
+ G + EA K+F++M KDV +WN M+ GY G A LF+K+ + ++ +W
Sbjct: 278 KCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSA 337
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV--------KEAHSYLEKY 264
+I G A+ F+QM C N + V + +G KE H + K+
Sbjct: 338 VIAGYAQRGLGFEALDVFRQM-RLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKW 396
Query: 265 --------PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD--VTVWNVMIFGLGEND 314
P ++ +I Y + +A +F+L+ +D V W V+I G ++
Sbjct: 397 ILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHG 456
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTI------CSDLPTLDLGRQIHAQAIKIARNQ 368
E L+ F QM + PDN + TI C+ L L GRQIHA + RN+
Sbjct: 457 EANEALELFSQMLQ----PDNFVMPNAFTISCALMACARLGALRFGRQIHAYVL---RNR 509
Query: 369 FTT----VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
F + V+N +I MY++ G++ +A + F ++ + +SW S++ G HG E+AL++F
Sbjct: 510 FESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIF 569
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
M+ PD +TFV VL ACS++G+VDQG YF+ M + + P + HY C+VDLL R
Sbjct: 570 YEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSR 629
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G +DEAM L IR ++ +P VW ALL ACR++ N+++GE A +++ELE N G Y
Sbjct: 630 AGRLDEAMEL---IRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSY 686
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
+L+ +Y + +D RI MK G+KK PGCSW+Q G F +GD SHP ++
Sbjct: 687 TLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIY 746
Query: 605 YLLNLLHTEIE 615
LL L I+
Sbjct: 747 DLLRDLMQRIK 757
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/473 (23%), Positives = 189/473 (39%), Gaps = 105/473 (22%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
++EA +F++M +D V+WN M+ GY + G D+A+ LF ++ E ++ T++ VIAG
Sbjct: 282 MEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAG 341
Query: 62 LMQSDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNGL-----------IDEALRVF 106
Q A +VF M + +VVT S++SG G I L +
Sbjct: 342 YAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLD 401
Query: 107 HGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD--VASWTIMVNGLVREGRIVEA 164
P D++ N +I C+ A + F + +D V +WT+++ G + G EA
Sbjct: 402 ENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEA 461
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
+LF +M D N ++ C +A + + + I+ V R +
Sbjct: 462 LELFSQMLQPD----NFVMPNAFTISCALMACARLGALR------FGRQIHAYVLRNRFE 511
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE 284
+A+ + N +I + ++G V A + N SWT+++ GY
Sbjct: 512 SAMLFVA----------NCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGY----- 556
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
G + GEE L+ F +M++ G PD TF VL
Sbjct: 557 --------------------------GMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYA 590
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
CS H+ + N F ++ +F VP + +
Sbjct: 591 CS-----------HSGMVDQGINYFNGMNK-----------------DFGVVPGAE--HY 620
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
++ L+ G ++A+EL M + KP +V +LSAC V+ G Y
Sbjct: 621 ACMVDLLSRAGRLDEAMELIRGMPM---KPTPAVWVALLSACRVYANVELGEY 670
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 152/357 (42%), Gaps = 38/357 (10%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTV--WNVMIFGLGENDLGEEGLKFFVQMKESG 330
T++I Y A+ V + TV WN +I E+ L+ + +M+ G
Sbjct: 62 THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 121
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG---NIQ 387
PD+ TF VL C ++P+ G +HA V N +++MY RCG N +
Sbjct: 122 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 181
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSAC 446
E + D++SWNSI+ G + +A+++FERM +PD ++ V VL AC
Sbjct: 182 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 241
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHY------TCVVDLLGRFGLIDEAMNLLNEIRA 500
+ G +G K + RS + VVD+ + G+++EA + ++
Sbjct: 242 ASVGAWSRG-------KQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKV 294
Query: 501 DGIEVSPTVWGALLGA----CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
+ W A++ R + + + E E +EL N + + Y G
Sbjct: 295 KDV----VSWNAMVTGYSQIGRFDDALGLFEKIREEKIEL---NVVTWSAVIAGYAQRGL 347
Query: 557 REDAKRIFAQMKENGVKKEPG-CSWIQINDG---GHVFLSGDSSHPKFHRLRYLLNL 609
+A +F QM+ G EP + + + G L G +H H ++++LNL
Sbjct: 348 GFEALDVFRQMRLCG--SEPNVVTLVSLLSGCALAGTLLHGKETH--CHAIKWILNL 400
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 182/622 (29%), Positives = 316/622 (50%), Gaps = 68/622 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ ++ LF+ + + W +IR Y +G ++ F M ++ + V +++S
Sbjct: 56 LHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKS 115
Query: 66 DNV---QGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ E G +R D+ T N++++ Y ++E+ R
Sbjct: 116 CALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGR------------- 162
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
QR+ E F EM R + T+ V + E + RK+F+ MP KD+
Sbjct: 163 ----------QRLGAGE-VFDEMTERTRSVRTVSV---LSEDSV---RKIFEMMPEKDLV 205
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
+WN +IAG NG + ++M +L ++ ++ + IS K+
Sbjct: 206 SWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKE----- 260
Query: 238 EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
I IR GL ++I +++I Y + V + +VF L+T
Sbjct: 261 ------IHGCSIRQGL------------DADIYVASSLIDMYAKCTRVADSCRVFTLLTE 302
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
RD WN +I G +N L +EGL+FF QM + P + +F+S++ C+ L TL LG+Q+
Sbjct: 303 RDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQL 362
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H + ++ ++++++ MYA+CGNI++A F + + D++SW ++I G A HG A
Sbjct: 363 HGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQA 422
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
A+ELFE+M KP+ + F+ VL+ACS+ GLVD+ YF+ M + + P HY
Sbjct: 423 PDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAA 482
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGERVME 535
V DLLGR G ++EA + + G+ + PT +W LL ACR+H NI + E R++E
Sbjct: 483 VSDLLGRAGRLEEAYDFIC-----GMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILE 537
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
++PNN+G Y++L +Y + R ++A + A M+ G++K P CSWI++ + + F++GD
Sbjct: 538 VDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDE 597
Query: 596 SHPKFHRLRYLLNLLHTEIERE 617
SHP + ++R + +L +E+E
Sbjct: 598 SHPCYEKIREAMEVLVELMEKE 619
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 154/396 (38%), Gaps = 70/396 (17%)
Query: 243 SIISVLIRNGL-------VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
+++ L+RN L ++ H+ + K+ S++ + + ++ Y + + ++++F +
Sbjct: 7 ALVKALLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTI 66
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
W +I + L + L F+ M SG PD+ F SVL C+ L L+LG
Sbjct: 67 HFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGE 126
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYAR-------------CGNIQSALLE---------- 392
+H I++ + NA++ MY++ G + + E
Sbjct: 127 SLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSV 186
Query: 393 ---------FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
F +P D++SWN+II G A +G E+ L + M + KPD T VL
Sbjct: 187 LSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVL 246
Query: 444 S---------------ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG----- 483
CS +D Y + + Y R A V LL
Sbjct: 247 PLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGI 306
Query: 484 ----------RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGER 532
+ GL DE + ++ I+ + +++ AC + +G ++ G
Sbjct: 307 SWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYI 366
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
N + L +MY CG AK+IF +M+
Sbjct: 367 TRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMR 402
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 48/208 (23%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PE--------- 49
R+ ++ +F + +RD ++WN +I G +NG D + F QM P+
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 50 -------------------RDMFTYNTVIAGLM-----QSDNVQGAKEVFDGMEVRDVVT 85
R+ F N IA + + N++ AK++FD M +RD+V+
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEMG 141
W +MI G +G +A+ +F M + + V++ V+ A + +D A YF M
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMT 468
Query: 142 -----ARDVASWTIMVNGLVREGRIVEA 164
A V + + + L R GR+ EA
Sbjct: 469 RDFGIAPGVEHYAAVSDLLGRAGRLEEA 496
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 155/442 (35%), Positives = 252/442 (57%), Gaps = 7/442 (1%)
Query: 173 AKDVQAWNLMIAGYLDNGCVGV--AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
+ D+ N +I Y G +GV A LF+KM +RD SW ++ GLV + + A F
Sbjct: 149 SSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLF 208
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+MP+ +WN+++ R + +A EK P N SW+ +++GY + G++ A
Sbjct: 209 DEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARV 268
Query: 291 VFELMT--TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+F+ M ++V W ++I G E L +E + QM SG D A S+L C++
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
L LG +IH+ + V NA++ MYA+CGN++ A F+ +P D++SWN+++
Sbjct: 329 GLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTML 388
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
GL HG+ ++A+ELF RMR +PD +TF+ VL +C++AGL+D+G YF M+ Y L
Sbjct: 389 HGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDL 448
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
P+ HY C+VDLLGR G + EA+ ++ + +E + +WGALLGACR+HN + + +
Sbjct: 449 VPQVEHYGCLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGALLGACRMHNEVDIAKE 505
Query: 529 AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGH 588
+ +++L+P + G Y +L+ +Y + E I ++MK GV+K G S +++ DG H
Sbjct: 506 VLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIH 565
Query: 589 VFLSGDSSHPKFHRLRYLLNLL 610
F D SHPK ++ +L L
Sbjct: 566 EFTVFDKSHPKSDQIYQMLGSL 587
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 210/439 (47%), Gaps = 50/439 (11%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC 127
V+ A ++F+ M RD V+WNSM+ G V G + +A R+F MP +D++SWN ++ C
Sbjct: 170 VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARC 229
Query: 128 QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM--PAKDVQAWNLMIAG 185
+ M A F++M R+ SW+ MV G + G + AR +FDKM PAK+V W ++IAG
Sbjct: 230 REMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAG 289
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
Y + G + A+ L +M + +GL + DAA SI+
Sbjct: 290 YAEKGLLKEADRLVDQM----------VASGL----KFDAAAVI-------------SIL 322
Query: 246 SVLIRNGLVK---EAHSYLEKYPYSNIASWTNVIVGYFEM----GEVGSAIKVFELMTTR 298
+ +GL+ HS L++ SN+ S V+ +M G + A VF + +
Sbjct: 323 AACTESGLLSLGMRIHSILKR---SNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK 379
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
D+ WN M+ GLG + G+E ++ F +M+ G PD TF +VL C+ +D G
Sbjct: 380 DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYF 439
Query: 359 AQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHG 415
K+ + V + ++ + R G ++ A+ ++P+ +++ W +++ H
Sbjct: 440 YSMEKV-YDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHN 498
Query: 416 YAEKALELFERM-RLTDFKPDDITFVGVLSACS--YAGLVDQGRYYFDCMKNKYFLQPRS 472
+ A E+ + + +L P + + + + A + + G+ D MK+ +P
Sbjct: 499 EVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVAD----IRSKMKSMGVEKPSG 554
Query: 473 AHYTCVVDLLGRFGLIDEA 491
A + D + F + D++
Sbjct: 555 ASSVELEDGIHEFTVFDKS 573
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 168/345 (48%), Gaps = 51/345 (14%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++A LF+KM +RDTV+WN M+ G K G L +A LF++MP+RD+ ++NT++ G +
Sbjct: 170 VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARC 229
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL--KDVVSWNLVI-- 121
+ A E+F+ M R+ V+W++M+ GY G ++ A +F MPL K+VV+W ++I
Sbjct: 230 REMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAG 289
Query: 122 ----GALVNCQRM-----------DLA----------ESYFKEMGAR--------DVASW 148
G L R+ D A ES +G R ++ S
Sbjct: 290 YAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSN 349
Query: 149 TIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD 204
++N L+ + G + +A +F+ +P KD+ +WN M+ G +G A +LF +M
Sbjct: 350 AYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRR 409
Query: 205 R----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCE-----KTWNSIISVLIRNGLVK 255
D ++ ++ ++ ID I YF M + + + + ++ +L R G +K
Sbjct: 410 EGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLK 469
Query: 256 EAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
EA ++ P N+ W ++ EV A +V + + D
Sbjct: 470 EAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLD 514
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 146/360 (40%), Gaps = 64/360 (17%)
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A++VF + +V + N +I +N + F +M+ G DN T+ +L CS
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC------------------------ 383
L + + +H K+ + V NA+I Y+RC
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 384 ---------GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
G ++ A F +P D+ISWN+++ G A KA ELFE+M +
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP----ER 245
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
+ +++ ++ S AG ++ R FD M +T ++ GL+ EA L
Sbjct: 246 NTVSWSTMVMGYSKAGDMEMARVMFDKMP---LPAKNVVTWTIIIAGYAEKGLLKEADRL 302
Query: 495 LNEIRADGIEVSPTVWGALLGAC----------RIHNNIKVGEIAGERVMELEPNNSGVY 544
++++ A G++ ++L AC RIH+ +K + +N+ V
Sbjct: 303 VDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG---------SNAYVL 353
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
L +MY CG + A +F N + K+ SW + G V G + F R+R
Sbjct: 354 NALLDMYAKCGNLKKAFDVF-----NDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMR 408
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 176/413 (42%), Gaps = 65/413 (15%)
Query: 156 VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
VR V +R++F++ + NL L A+ + + +H+ DL +LI+
Sbjct: 7 VRAPSWVSSRRIFEERLQDLPKCANLNQVKQLH------AQIIRRNLHE-DLHIAPKLIS 59
Query: 216 GLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG----------------------- 252
L R+ + A+ F Q+ E NS+I +N
Sbjct: 60 ALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFT 119
Query: 253 ---------------LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVG--SAIKVFEL 294
+VK H+++EK S+ N ++ Y G +G A+K+FE
Sbjct: 120 YPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEK 179
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
M+ RD WN M+ GL + + + F +M P D ++ ++L + +
Sbjct: 180 MSERDTVSWNSMLGGLVKAGELRDARRLFDEM----PQRDLISWNTMLDGYARCREMSKA 235
Query: 355 RQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGL 411
++ + + RN TVS + M+ Y++ G+++ A + F +P+ ++++W II G
Sbjct: 236 FELFEKMPE--RN---TVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGY 290
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
A G ++A L ++M + K D + +L+AC+ +GL+ G +K + L
Sbjct: 291 AEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILK-RSNLGSN 349
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
+ ++D+ + G + +A ++ N+I + W +L +H + K
Sbjct: 350 AYVLNALLDMYAKCGNLKKAFDVFNDIPKKDL----VSWNTMLHGLGVHGHGK 398
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 347 DLP---TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
DLP L+ +Q+HAQ I+ ++ ++ +I+ + C A+ F+ V ++
Sbjct: 25 DLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHL 84
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
NS+I A + +A +F M+ D+ T+ +L ACS G+ + +K
Sbjct: 85 CNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-------GQSWLPVVK 137
Query: 464 ------NKYFLQPRSAHYTCVVDLLGRFG--LIDEAMNLLNEIRADGIEVSPTVWGALLG 515
K L ++D R G + +AM L ++ E W ++LG
Sbjct: 138 MMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS----ERDTVSWNSMLG 193
Query: 516 ACRIHNNIKVGEIAGERVM--ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
+K GE+ R + E+ + + + + Y C A +F +M E
Sbjct: 194 GL-----VKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPE 244
>gi|449527015|ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 191/679 (28%), Positives = 320/679 (47%), Gaps = 115/679 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ + AQ LF++MP R V+WN+MI GY K G A+ L ++M ++ T +
Sbjct: 48 VRDGHLDLAQTLFNEMPVRSVVSWNIMISGYSKFGKYSEALNLASEMHCNNVKLNETTFS 107
Query: 61 GLMQS---------------------------------------DNVQGAKEVFDGMEVR 81
L+ +++ GAK+VFD + +
Sbjct: 108 SLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDISGAKQVFDELHDK 167
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV----NCQR-MDLA--- 133
+ + W+ ++ GYV L+D+AL +F +P +DVV+W +I A NC+R ++L
Sbjct: 168 NDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYARSEHNCKRGLELFCSM 227
Query: 134 -------------ESYFKEMGARDVASWTIMVNGLVRE--------------------GR 160
+S + G SW +V+G++ +
Sbjct: 228 RMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEA 287
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
I A+ ++D M ++A N ++ G + G + AE++F K+ +++ S+ ++ G S
Sbjct: 288 IDSAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLREKNPVSYNLMLKGYATS 347
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
RI+ + F++M + N++ISV RNG
Sbjct: 348 GRIEGSKRLFERMTHKTTSSLNTMISVYSRNG---------------------------- 379
Query: 281 EMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
E+ A K+FE + + D WN MI G +N E LK ++ M + +TF+
Sbjct: 380 ---EIDKAFKLFESVKSEGDPVTWNSMISGYIQNHQHEGALKLYITMCRTSVERSRSTFS 436
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
++ C+ L + LG+ +H AI+ A + V ++I MYA+CG+I A F+SV +
Sbjct: 437 ALFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDAQTSFASVCLP 496
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
++ ++ ++I G +HG +A +F+ M P+ T +G+LSACS AG+V +G F
Sbjct: 497 NVAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSCAGMVKEGMTVF 556
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
M+ Y + P HY CVVDLLGR G + EA IR IE +WGALL AC
Sbjct: 557 HSMEKCYGVIPTLEHYACVVDLLGRSGRLYEAEAF---IRCMPIEADRVIWGALLNACWF 613
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
++++GE ++V+ L+P Y+IL+ +Y G+ + + ++ VKK GCS
Sbjct: 614 WMDLELGESVAKKVLSLDPKAISAYIILSNIYAKLGKWVEKINVRRKLMSLKVKKIRGCS 673
Query: 580 WIQINDGGHVFLSGDSSHP 598
WI +N+ VF +GD SHP
Sbjct: 674 WIDVNNKTCVFSAGDRSHP 692
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/498 (21%), Positives = 211/498 (42%), Gaps = 83/498 (16%)
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
+++S N+ I V +DLA++ F EM R V SW IM++G + G+ EA L +M
Sbjct: 36 NIISTNIYISRHVRDGHLDLAQTLFNEMPVRSVVSWNIMISGYSKFGKYSEALNLASEMH 95
Query: 173 AKDVQ----AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV----NSRRID 224
+V+ ++ +++ +GC + + L ++++ + LV N I
Sbjct: 96 CNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDIS 155
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE 284
A F ++ + + W+ ++ ++ L+ +A K P ++ +WT +I Y
Sbjct: 156 GAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAY----- 210
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP-SPDNATFTSVLT 343
E++ + GL+ F M+ +G P+ TF SV+
Sbjct: 211 ------------------------ARSEHNC-KRGLELFCSMRMNGEVEPNEFTFDSVVR 245
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
C + L G+ +H K + +V +A+I Y +C I SA + S+ + +
Sbjct: 246 ACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDSAKAVYDSMERPCLKA 305
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
NS++ GL + G A E+F ++R + + +++ +L + +G ++ + F+ M
Sbjct: 306 SNSLLEGLIFAGRINDAEEIFCKLR----EKNPVSYNLMLKGYATSGRIEGSKRLFERMT 361
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG--------------------- 502
+K ++ ++ + R G ID+A L ++++G
Sbjct: 362 HK-----TTSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTWNSMISGYIQNHQHEGA 416
Query: 503 -----------IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTE 549
+E S + + AL AC I++G+ + E +S VY+ L +
Sbjct: 417 LKLYITMCRTSVERSRSTFSALFQACTCLEYIQLGQALHVHAIR-EAFDSNVYVGTSLID 475
Query: 550 MYLSCGRREDAKRIFAQM 567
MY CG DA+ FA +
Sbjct: 476 MYAKCGSIYDAQTSFASV 493
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 139/334 (41%), Gaps = 41/334 (12%)
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
SNI S I + G + A +F M R V WN+MI G + E L +M
Sbjct: 35 SNIISTNIYISRHVRDGHLDLAQTLFNEMPVRSVVSWNIMISGYSKFGKYSEALNLASEM 94
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA----- 381
+ + TF+S+L+IC+ G+Q H +K F V +A++ YA
Sbjct: 95 HCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDI 154
Query: 382 --------------------------RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+C + AL F +P D+++W ++I A
Sbjct: 155 SGAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYARSE 214
Query: 416 Y-AEKALELFERMRLT-DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSA 473
+ ++ LELF MR+ + +P++ TF V+ AC + G+ + KY +
Sbjct: 215 HNCKRGLELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGIL-TKYGFHFDHS 273
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV 533
+ ++ + ID A + + + ++ S ++ L+ A RI++ A E
Sbjct: 274 VCSALILFYCQCEAIDSAKAVYDSMERPCLKASNSLLEGLIFAGRIND-------AEEIF 326
Query: 534 MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+L N Y ++ + Y + GR E +KR+F +M
Sbjct: 327 CKLREKNPVSYNLMLKGYATSGRIEGSKRLFERM 360
>gi|356509350|ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Glycine max]
Length = 678
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 178/631 (28%), Positives = 306/631 (48%), Gaps = 55/631 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R +Q+A +LFD+MPQ ++ +WN +++ + +G +A+ LFN MP + F++N V++
Sbjct: 48 RCRNLQDASHLFDEMPQTNSFSWNTLVQAHLNSGHTHSALHLFNAMPHKTHFSWNMVVSA 107
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL-------KDV 114
+S ++Q A +F+ M ++ + WNS+I Y +G +AL +F M L +D
Sbjct: 108 FAKSGHLQLAHSLFNAMPSKNHLVWNSIIHSYSRHGHPGKALFLFKSMNLDPSQIVYRDA 167
Query: 115 VSWNLVIGAL-----VNCQRMDLAESYFKEMG---------------------------- 141
+GA +NC + A + MG
Sbjct: 168 FVLATALGACADSLALNCGKQVHARVFVDGMGLELDRVLCSSLINLYGKCGDLDSAARIV 227
Query: 142 --ARDVASWTI--MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
RDV +++ +++G GR+ EAR +FD WN +I+GY+ NG A +
Sbjct: 228 SFVRDVDEFSLSALISGYANAGRMREARSVFDSKVDPCAVLWNSIISGYVSNGEEVEAVN 287
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK---TWNSIISVLIRNGLV 254
LF M + + ++++ + KQM K T + +++ + +
Sbjct: 288 LFSAMLRNGVQGDASAVANILSAASGLLVVELVKQMHVYACKAGVTHDIVVASSLLDAYS 347
Query: 255 K-----EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
K EA + + +I Y G + A +F M ++ + WN ++ G
Sbjct: 348 KCQSPCEACKLFSELKEYDTILLNTMITVYSNCGRIEDAKLIFNTMPSKTLISWNSILVG 407
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
L +N E L F QM + D +F SV++ C+ +L+LG Q+ +AI I
Sbjct: 408 LTQNACPSEALNIFSQMNKLDLKMDRFSFASVISACACRSSLELGEQVFGKAITIGLESD 467
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
+S +++ Y +CG ++ F + D +SWN+++ G A +GY +AL LF M
Sbjct: 468 QIISTSLVDFYCKCGFVEIGRKVFDGMVKTDEVSWNTMLMGYATNGYGIEALTLFCEMTY 527
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
P ITF GVLSAC ++GLV++GR F MK+ Y + P H++C+VDL R G +
Sbjct: 528 GGVWPSAITFTGVLSACDHSGLVEEGRNLFHTMKHSYNINPGIEHFSCMVDLFARAGYFE 587
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
EAM+L+ E+ + +W ++L C H N +G++A E++++LEP N+G Y+ L+
Sbjct: 588 EAMDLIEEMP---FQADANMWLSVLRGCIAHGNKTIGKMAAEQIIQLEPENTGAYIQLSN 644
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
+ S G E + + M++ +K PGCSW
Sbjct: 645 ILASSGDWEGSALVRELMRDKHFQKIPGCSW 675
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 22/230 (9%)
Query: 350 TLDLGRQIHAQAIKIA-RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
TL GRQ+H +K N V+N ++ +Y+RC N+Q A F +P + SWN+++
Sbjct: 15 TLREGRQLHVAFLKTGILNSSVAVANRLLQLYSRCRNLQDASHLFDEMPQTNSFSWNTLV 74
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFV--GVLSACSYAGLVDQGRYYFDCMKNKY 466
G+ AL LF M P F V+SA + +G + F+ M +K
Sbjct: 75 QAHLNSGHTHSALHLFNAM------PHKTHFSWNMVVSAFAKSGHLQLAHSLFNAMPSKN 128
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV---SPTVWGALLGACRIHNNI 523
L + ++ R G +A+ L + D ++ V LGAC +
Sbjct: 129 HLV-----WNSIIHSYSRHGHPGKALFLFKSMNLDPSQIVYRDAFVLATALGACADSLAL 183
Query: 524 KVGEIAGERV----MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
G+ RV M LE + + L +Y CG + A RI + +++
Sbjct: 184 NCGKQVHARVFVDGMGLELDRV-LCSSLINLYGKCGDLDSAARIVSFVRD 232
>gi|359475162|ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Vitis vinifera]
Length = 670
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 198/648 (30%), Positives = 319/648 (49%), Gaps = 63/648 (9%)
Query: 23 TWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
T N +I Y K+GFL A LF++MPER++FT+N +I +++ N++ A+E+FD +D
Sbjct: 25 TSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAIIWAYIKTQNLKQARELFDSAPSKD 84
Query: 83 VVTWNSMISGYV-CNGLIDEALRVFHGM-PLKDVVSWN-LVIGALVNCQRMDLAESYFKE 139
+VT+NSM+SGY+ +G AL++F M L D + + ++N ESY K+
Sbjct: 85 LVTYNSMLSGYINTDGYETNALKLFIEMQSLNDETRIDEFSLTRMLNLSAKLSMESYGKQ 144
Query: 140 M----------------------------------------GARDVASWTIMVNGLVREG 159
+ G D+ S MV REG
Sbjct: 145 LHSYMVKTANNISGFAVSSLIDMYSKCGCFREVCQVFDGCAGVLDLVSKNAMVAACCREG 204
Query: 160 RIVEARKLF-DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
+ LF + DV +WN +I+GY+ NGC A LF M + ++ + I GL+
Sbjct: 205 ELEMGVNLFWRDLELNDVVSWNTLISGYVQNGCEEDALKLFVHMEENEVRWNEHTIAGLL 264
Query: 219 NSRRIDAAISYFKQMPET------CEKTWNSIIS-----VLIRNGLVKEAHSYLEKYPYS 267
++ A + K E E +N IS V + G +K A
Sbjct: 265 SA---CAGLRSLKLGKEVHGWVLKYELGFNPFISSGLVDVYCKCGNMKYAELVYATIGTG 321
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
N S T++IVG+ G +G A ++F+ +T + +W + G ++ E + + +
Sbjct: 322 NAFSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWTALFTGYVKSQQCEAVFELLSEFR 381
Query: 328 -ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
+ PD SVL C+ L+ G+QIHA ++I + +AM+ MY++ GNI
Sbjct: 382 VKEAMVPDALILISVLGACAIQAALNPGKQIHAYVLRIGIELDEKLVSAMVDMYSKSGNI 441
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
+ A F V D + +N + G A+HG+ +A++ FE M +PD +TFV +LSAC
Sbjct: 442 KYAEKIFQRVTNRDAVIYNIMTAGYAHHGHENQAIQQFEEMLERGVRPDAVTFVALLSAC 501
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
+ GLV+ G YF M + Y + P HY C++DL GR +++A+ + I IE
Sbjct: 502 RHCGLVELGEKYFASMTD-YNILPEIDHYACMIDLYGRANQLEKAVAFMKRI---PIEPD 557
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
+ GA L ACRI+ N K+ A E+++ +E +N Y+ L +Y + G+ + RI +
Sbjct: 558 AVILGAFLNACRINRNTKLAREAEEKILRIEGDNGARYVQLANVYAAEGKWVEMGRIRRK 617
Query: 567 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
M+EN +KK GCSW+ + + H+F SGDSSH + +L +L E+
Sbjct: 618 MRENEIKKFAGCSWVYVENRVHIFTSGDSSHSSAEAIYSILLILTAEL 665
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 175/393 (44%), Gaps = 41/393 (10%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLF-NQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM 78
D V+ N M+ + G L+ + LF + D+ ++NT+I+G +Q+ + A ++F M
Sbjct: 189 DLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYVQNGCEEDALKLFVHM 248
Query: 79 EVRDVVTWNS-MISGYV--CNGLIDEAL-RVFHGMPLKDVVSWNLVIGA-LVN----CQR 129
E + V WN I+G + C GL L + HG LK + +N I + LV+ C
Sbjct: 249 E-ENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFISSGLVDVYCKCGN 307
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
M AE + +G + S T M+ G +G + EAR+LFD + K W + GY+ +
Sbjct: 308 MKYAELVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWTALFTGYVKS 367
Query: 190 -GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL 248
C V E L + + ++ ++ + I AA++ KQ+
Sbjct: 368 QQCEAVFELLSEFRVKEAMVPDALILISVLGACAIQAALNPGKQI--------------- 412
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
H+Y+ + + +V Y + G + A K+F+ +T RD ++N+M
Sbjct: 413 ---------HAYVLRIGIELDEKLVSAMVDMYSKSGNIKYAEKIFQRVTNRDAVIYNIMT 463
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
G + + ++ F +M E G PD TF ++L+ C ++LG + A N
Sbjct: 464 AGYAHHGHENQAIQQFEEMLERGVRPDAVTFVALLSACRHCGLVELGEKYFASMTDY--N 521
Query: 368 QFTTVSN--AMITMYARCGNIQSALLEFSSVPI 398
+ + MI +Y R ++ A+ +PI
Sbjct: 522 ILPEIDHYACMIDLYGRANQLEKAVAFMKRIPI 554
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
++ I+ A+ +F ++ RD V +N+M GY +G + A+ F +M ER D T+
Sbjct: 437 KSGNIKYAEKIFQRVTNRDAVIYNIMTAGYAHHGHENQAIQQFEEMLERGVRPDAVTFVA 496
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVT----WNSMISGYVCNGLIDEALRVFHGMPLK- 112
+++ V+ ++ F M +++ + MI Y +++A+ +P++
Sbjct: 497 LLSACRHCGLVELGEKYFASMTDYNILPEIDHYACMIDLYGRANQLEKAVAFMKRIPIEP 556
Query: 113 DVVSWNLVIGALVNCQRMDL-------AESYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
D V ++GA +N R++ AE + + A + + N EG+ VE
Sbjct: 557 DAV----ILGAFLNACRINRNTKLAREAEEKILRIEGDNGARYVQLANVYAAEGKWVEMG 612
Query: 166 KLFDKMPAKDVQAW 179
++ KM +++ +
Sbjct: 613 RIRRKMRENEIKKF 626
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 100/254 (39%), Gaps = 40/254 (15%)
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG--- 410
G + HA AIK SN +I +Y++ G + A F +P ++ +WN+II
Sbjct: 7 GFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAIIWAYIK 66
Query: 411 -------------------LAYH----------GYAEKALELFERMR-LTD-FKPDDITF 439
+ Y+ GY AL+LF M+ L D + D+ +
Sbjct: 67 TQNLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDETRIDEFSL 126
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+L+ + + G+ M K + ++D+ + G E + +
Sbjct: 127 TRMLNLSAKLSMESYGKQLHSYMV-KTANNISGFAVSSLIDMYSKCGCFREVCQVFDGCA 185
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRED 559
VS A++ AC +++G R +LE N+ + L Y+ G ED
Sbjct: 186 GVLDLVSKN---AMVAACCREGELEMGVNLFWR--DLELNDVVSWNTLISGYVQNGCEED 240
Query: 560 AKRIFAQMKENGVK 573
A ++F M+EN V+
Sbjct: 241 ALKLFVHMEENEVR 254
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 196/615 (31%), Positives = 309/615 (50%), Gaps = 54/615 (8%)
Query: 17 PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIA-----GLMQSDN 67
P R V+WN ++ Y ++G M +F+++ E +T TV+ GL +S
Sbjct: 223 PVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQ 282
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC 127
+ G+E D V N +I Y ++A VF + DVV +L+I
Sbjct: 283 AVHGLVIKRGLET-DRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCF--- 338
Query: 128 QRMDLAESYF------KEMGARD----------VASWTIMVNGLVREGRIVEARKLFDKM 171
R D+A F +MG + VAS T VN L R + F +
Sbjct: 339 DRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVN-LCRSIHAHIVKSGFSRT 397
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
+ ++ Y+ G V A F M D+ SW L++G + + + FK
Sbjct: 398 KG----VCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFK 453
Query: 232 QMPETCEK------TWNSIISVL-----IRNGLVKEAHSYLEKYPYSNIASWTNVIVG-Y 279
++ CE T+ I+ +R G + H+ + K + + +++ Y
Sbjct: 454 EL--ICEGVLANKYTYVGILRCCTSLMDLRFGC--QVHACVLKSGFQGDYDVSKMLLDMY 509
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G +A VF+ + RDV W V++ + D GE+ ++ F M P++AT
Sbjct: 510 VQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLA 569
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
+ L++CSDL L G Q+H+ IK N + VS+A++ MY +CGN+ A + F H
Sbjct: 570 TSLSVCSDLACLGSGLQLHSYTIKSGWNS-SVVSSALVDMYVKCGNLADAEMLFDESDTH 628
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
D++ WN+IICG A HG+ KALE F+ M PD+ITFVGVLSACS+AGL+D+GR YF
Sbjct: 629 DLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYF 688
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
+ + Y + P HY C+VD+L + G + EA +L+NE+ + ++W +LGACR+
Sbjct: 689 KLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMP---LTPDASLWKTILGACRM 745
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
H NI++ E A E++ E +P++ ++L+ +Y R D ++ + + + GVKKEPGCS
Sbjct: 746 HGNIEIAERAAEKLFESQPDDISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCS 805
Query: 580 WIQINDGGHVFLSGD 594
WI+IN HVFLS D
Sbjct: 806 WIEINGKLHVFLSQD 820
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 201/485 (41%), Gaps = 38/485 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ R+ +A+++FD MP RD V W M+ G A+ LF +M E + +A
Sbjct: 107 KCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAA 166
Query: 62 LMQSDNVQ---GAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+++ V G V+ D +S++ YV G +D A R P++
Sbjct: 167 ALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRS 226
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM--------GARDVASWTI-------MVNGLVRE 158
VSWN AL+N D Y K M +++ +T+ M GL +
Sbjct: 227 DVSWN----ALLNEYARD--GDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKS 280
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G+ V + + V N +I Y A ++F ++ + D+ +I+
Sbjct: 281 GQAVHGLVIKRGLETDRVLN-NCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFD 339
Query: 219 NSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNG---LVKEAHSYLEKYPYSNIAS 271
A F QM + K T+ + V R G L + H+++ K +S
Sbjct: 340 RHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKG 399
Query: 272 WTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
+ IVG Y + G V AI F+LM D+ WN ++ G + E GL+ F ++ G
Sbjct: 400 VCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEG 459
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
+ T+ +L C+ L L G Q+HA +K VS ++ MY + G +A
Sbjct: 460 VLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNAR 519
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
L F + D+ SW ++ A EKA+E F M + +P+D T LS CS
Sbjct: 520 LVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLA 579
Query: 451 LVDQG 455
+ G
Sbjct: 580 CLGSG 584
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 155/391 (39%), Gaps = 47/391 (12%)
Query: 104 RVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVE 163
R+ P D + ++ C R+ A S F M RDV +WT MV+ + G
Sbjct: 85 RLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGA 144
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR--------DLTSWKQLIN 215
A +LF +M + V +A L VG ++H + D L+
Sbjct: 145 ALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVE 204
Query: 216 GLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS--NIASWT 273
V+ +D A P + +WN++++ R+G + +K S I+ +T
Sbjct: 205 AYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYT 264
Query: 274 --NVIVGYFEMGEVGS-----------------------------------AIKVFELMT 296
V+ E+G S A +VF +
Sbjct: 265 LPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARID 324
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
DV ++MI +D+ E F+QM + G P+ TF + + S ++L R
Sbjct: 325 EPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRS 384
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
IHA +K ++ V +A++ MY + G +Q A+L F + DI SWN+++ G
Sbjct: 385 IHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNN 444
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACS 447
E L +F+ + + T+VG+L C+
Sbjct: 445 CEHGLRIFKELICEGVLANKYTYVGILRCCT 475
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G + A VF+ M RDV W M+ + L+ F +M E G P+
Sbjct: 105 YCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFAL 164
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+ L C+ L Q+HAQA+K+ VS++++ Y CG + A P+
Sbjct: 165 AAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPV 224
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+SWN+++ A G K + +F+++ + + T VL C GL G+
Sbjct: 225 RSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQ 282
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 134/337 (39%), Gaps = 55/337 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ +Q+A FD M D +WN ++ G++ ++ + +F ++ +
Sbjct: 409 VKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYV 468
Query: 61 GLM---------------------------------------QSDNVQGAKEVFDGMEVR 81
G++ Q+ A+ VFD ++ R
Sbjct: 469 GILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKER 528
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGM------PLKDVVSWNLVIGALVNCQRMDLA-E 134
DV +W ++S Y ++A+ F M P ++ +L + + + C L
Sbjct: 529 DVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLH 588
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
SY + G + +V+ V+ G + +A LFD+ D+ WN +I GY +G
Sbjct: 589 SYTIKSGWNSSVVSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYK 648
Query: 195 AEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT-----WNSII 245
A + FQ+M D D ++ +++ ++ +D YFK + T + ++
Sbjct: 649 ALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMV 708
Query: 246 SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
+L + G + EA S + + P + AS I+G M
Sbjct: 709 DILAKAGKLAEAESLINEMPLTPDASLWKTILGACRM 745
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 108/271 (39%), Gaps = 39/271 (14%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
++ + L C+ L G+ +HA+ ++ + ++++ MY +CG + A F +
Sbjct: 62 SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA---GLVD 453
P D+++W +++ + G A AL LF M P+ L AC+ G
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTP 181
Query: 454 QGRYYFDCMKNKYFLQPR------SAHYTC-VVDLLGRFGLIDEAMN-------LLNEIR 499
Q + +K + P A+ +C VD+ R L+D + LLNE
Sbjct: 182 Q--VHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAER-ALLDSPVRSDVSWNALLNEYA 238
Query: 500 AD----------------GIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEPNNS 541
D G E+S +L C K G+ V++ LE +
Sbjct: 239 RDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRV 298
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ L EMY C EDA +FA++ E V
Sbjct: 299 -LNNCLIEMYSKCLSAEDAYEVFARIDEPDV 328
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 86/226 (38%), Gaps = 57/226 (25%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ + +A+ LFD+ D V WN +I GY ++G A+ F +M
Sbjct: 610 VKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQEM------------- 656
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
D V D +T+ ++S GL+DE R F + + V
Sbjct: 657 --------------IDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLL--------SSV 694
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP-AKDVQAW 179
G + + MV+ L + G++ EA L ++MP D W
Sbjct: 695 YGITPTLEH------------------YACMVDILAKAGKLAEAESLINEMPLTPDASLW 736
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDR---DLTSWKQLINGLVNSRR 222
++ +G + +AE +K+ + D++S L N + +R
Sbjct: 737 KTILGACRMHGNIEIAERAAEKLFESQPDDISSCILLSNIYADLKR 782
>gi|145335647|ref|NP_172798.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|110741720|dbj|BAE98806.1| hypothetical protein [Arabidopsis thaliana]
gi|332190892|gb|AEE29013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 474
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 243/427 (56%), Gaps = 9/427 (2%)
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI 249
G + A +F +M ++++ W +ING + ++ + +A YF PE WN++IS I
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
G + EA S ++ P ++ SW V+ GY +G++ + +VF+ M R+V WN +I G
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 310 LGENDLGEEGLKFFVQMKESGPS-PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
+N E L F +M + G P++AT T VL+ C+ L D G+ +H + N+
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK 221
Query: 369 F-TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
V NA+I MY +CG I+ A+ F + D+ISWN++I GLA HG+ +AL LF M
Sbjct: 222 VDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEM 281
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
+ + PD +TFVGVL AC + GLV+ G YF+ M + + P H CVVDLL R G
Sbjct: 282 KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGF 341
Query: 488 IDEAMNLLNE--IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL 545
+ +A+ +N+ ++AD + +W LLGA +++ + +GE+A E +++LEP N ++
Sbjct: 342 LTQAVEFINKMPVKADAV-----IWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFV 396
Query: 546 ILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRY 605
+L+ +Y GR +DA R+ M++ G KKE G SWI+ +DG F S HP+ L+
Sbjct: 397 MLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQR 456
Query: 606 LLNLLHT 612
+L L +
Sbjct: 457 ILRELKS 463
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 194/425 (45%), Gaps = 48/425 (11%)
Query: 92 GYVC-NGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTI 150
G +C G+I A +VF M K+VV W +I + + + A YF RD+ W
Sbjct: 36 GMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNT 95
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
M++G + G ++EAR LFD+MP +DV +WN ++ GY + G + E +F M +R++ SW
Sbjct: 96 MISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSW 155
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA--------HSYLE 262
LI G + R+ + FK+M + N L+ + K H Y E
Sbjct: 156 NGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGE 215
Query: 263 KYPYSNI-ASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
Y+ + + N ++ Y + G + A++VF+ + RD+ WN MI GL + G E L
Sbjct: 216 TLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEAL 275
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F +MK SG SPD TF VL C + ++ G N+M T
Sbjct: 276 NLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG---------------LAYFNSMFT-- 318
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+FS +P +I ++ L+ G+ +A+E +M + K D + +
Sbjct: 319 -----------DFSIMP--EIEHCGCVVDLLSRAGFLTQAVEFINKMPV---KADAVIWA 362
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS-AHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+L A VD G + + L+PR+ A++ + ++ G G D+A L +R
Sbjct: 363 TLLGASKVYKKVDIGEVALEELIK---LEPRNPANFVMLSNIYGDAGRFDDAARLKVAMR 419
Query: 500 ADGIE 504
G +
Sbjct: 420 DTGFK 424
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 164/376 (43%), Gaps = 43/376 (11%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
N + A+ FD P+RD V WN MI GY + G + A LF+QMP RD+ ++NTV+ G
Sbjct: 72 NKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGY 131
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
+++ + VFD M R+V +WN +I GY NG + E L F M + V
Sbjct: 132 ANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSV------- 184
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
+ N M L S ++GA D W + + G + K+ DV N +
Sbjct: 185 -VPNDATMTLVLSACAKLGAFDFGKW------VHKYGETLGYNKV-------DVNVKNAL 230
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----E 238
I Y G + +A ++F+ + RDL SW +INGL A++ F +M + +
Sbjct: 231 IDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDK 290
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKY-----PYSNIASWTNVIVGYFEMGEVGSAIKVFE 293
T+ ++ GLV++ +Y I V+ G + A++
Sbjct: 291 VTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFIN 350
Query: 294 LMTTR-DVTVWNVMIFG---LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
M + D +W ++ + D+GE L+ ++++ P A F + I
Sbjct: 351 KMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNP----ANFVMLSNIYG--- 403
Query: 350 TLDLGRQIHAQAIKIA 365
D GR A +K+A
Sbjct: 404 --DAGRFDDAARLKVA 417
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 189/620 (30%), Positives = 323/620 (52%), Gaps = 42/620 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYN--------T 57
+++ + +FD+M +RD V+WN +I + +GF A+ LF +M R F N
Sbjct: 58 LKDVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLP 117
Query: 58 VIAGLMQSDNVQGAK----EVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
V AGL D V G + V G++ + V N+++ Y G + ++ RVF + ++
Sbjct: 118 VCAGL--EDGVTGRQIHCYVVKTGLDSQ-VTVGNALVDVYGKCGYVKDSRRVFDEISERN 174
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
VSWN +I +L +R A F+ M V ++ + ++ ++ KLFD
Sbjct: 175 GVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLP---VLVELKLFDFGKE 231
Query: 174 -----------KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
D+ N +I Y +G A ++F ++ ++++ SW ++ +R
Sbjct: 232 IHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRL 291
Query: 223 IDAAISYFKQMPETCE----KTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNV 275
AA+ +QM E T+ +++ R G + KE H+ + S +N
Sbjct: 292 ELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNA 351
Query: 276 IVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+ Y + G + A +VF++ + RD +N++I G + E L+ F++M G D
Sbjct: 352 LTDMYAKCGCLNLARRVFKI-SLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLD 410
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
++ V++ C++L L G+++H A++ + ++NA++ Y +CG I A F
Sbjct: 411 VVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFR 470
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+P D SWNS+I G G A+ LFE M+ + D ++++ VLSACS+ GLV++
Sbjct: 471 QIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEE 530
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
G+ YF+ M+ + ++P HY C+VDLLGR GLI+EA+ L+ + IE VWGALL
Sbjct: 531 GKKYFEHMQVQN-IKPTQMHYACMVDLLGRAGLIEEAVKLIESLP---IEPDANVWGALL 586
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
GACRIH I++ A E + +L+P +SG Y +L+ MY G+ ++A ++ MK G KK
Sbjct: 587 GACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKK 646
Query: 575 EPGCSWIQINDGGHVFLSGD 594
PGCSW+QI++ H F++G+
Sbjct: 647 NPGCSWVQIDNQVHAFVAGE 666
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 139/548 (25%), Positives = 243/548 (44%), Gaps = 76/548 (13%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+ D+F NT++ ++ K VFD M RDVV+WNS+I + +G EA+ +F
Sbjct: 39 DSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCE 98
Query: 109 MPLKDVVSWNLV--IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARK 166
M L+ N+V + L C ++ + R + + + GL +
Sbjct: 99 MNLRSGFRPNMVSIVSVLPVCAGLE------DGVTGRQIHCYVVK-TGLDSQ-------- 143
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
V N ++ Y G V + +F ++ +R+ SW +I L R A
Sbjct: 144 ---------VTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDA 194
Query: 227 ISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEKYPY-SNIASWTNVIVG 278
+ F+ M + K T++S++ VL+ L KE H + ++ S+I +I
Sbjct: 195 LEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDM 254
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G A VF + +++ WN M+ +N L + QM+ G P++ TF
Sbjct: 255 YAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTF 314
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
T+VL C+ + L G++IHA+AI+ + VSNA+ MYA+CG + A F + +
Sbjct: 315 TNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISL 373
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-- 456
D +S+N +I G + ++L LF M + K D ++++GV+SAC+ + QG+
Sbjct: 374 RDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEV 433
Query: 457 ---------------------YYFDC----MKNKYFLQPRS---AHYTCVVDLLGRFGLI 488
+Y C + K F Q S A + ++ G G +
Sbjct: 434 HGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGEL 493
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE--RVMELEPNNSGVYLI 546
A+NL ++ DG+E + A+L AC ++ G+ E +V ++P
Sbjct: 494 TIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKP-------- 545
Query: 547 LTEMYLSC 554
T+M+ +C
Sbjct: 546 -TQMHYAC 552
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 142/319 (44%), Gaps = 56/319 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKN----------------GFLDNAMCLFN 45
++ R +A N+F+++ +++ V+WN M+ + +N G + N++ N
Sbjct: 257 KSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTN 316
Query: 46 QMP-----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
+P D+F N + + + A+ VF + +RD
Sbjct: 317 VLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFK-ISLRD 375
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFK 138
V++N +I GY E+LR+F M +K DVVS+ VI A N + +
Sbjct: 376 EVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHG 435
Query: 139 EMGARDVASWTIMVNGL----VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ + + + N L ++ GRI A K+F ++P++D +WN MI GY G + +
Sbjct: 436 LAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTI 495
Query: 195 AEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIIS 246
A +LF+ M + D S+ +++ + ++ YF+ M + + + ++
Sbjct: 496 AINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYACMVD 555
Query: 247 VLIRNGLVKEAHSYLEKYP 265
+L R GL++EA +E P
Sbjct: 556 LLGRAGLIEEAVKLIESLP 574
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 10/188 (5%)
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G D+ TF VL C+D ++ GR+IH K+ + V N ++ Y CG ++
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL-TDFKPDDITFVGVLSACSY 448
F + D++SWNS+I + HG+ +A+ LF M L + F+P+ ++ V VL C
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVC-- 119
Query: 449 AGLVD--QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
AGL D GR C K L + +VD+ G+ G + ++ + +EI E +
Sbjct: 120 AGLEDGVTGR-QIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEIS----ERN 174
Query: 507 PTVWGALL 514
W A++
Sbjct: 175 GVSWNAII 182
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
++ RI A +F ++P RDT +WN MI GY G L A+ LF M E D +Y
Sbjct: 457 IKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYI 516
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V++ V+ K+ F+ M+V+++ + + M+ GLI+EA+++ +P++
Sbjct: 517 AVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIE 576
Query: 113 -DVVSWNLVIGALVNCQRMDL----AESYFKEMGARDVASWTIMVNGLVREGRIVEA--- 164
D W ++GA ++L AE FK + + ++++ N G+ EA
Sbjct: 577 PDANVWGALLGACRIHGYIELAHWAAEHLFK-LKPQHSGYYSVLSNMYAEAGKWDEANQV 635
Query: 165 RKLFDKMPAK 174
RKL AK
Sbjct: 636 RKLMKSRGAK 645
>gi|345505208|gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
Length = 615
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 174/525 (33%), Positives = 279/525 (53%), Gaps = 17/525 (3%)
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV--NCQRMDLAESYF 137
V D WN++I + +AL +F M LK+ VS + +LV C R+ +
Sbjct: 85 VEDPFLWNAVIKSHSHGVEPRKALLLFFLM-LKNGVSVDKFSLSLVLKACSRLGFVKEGM 143
Query: 138 KEMG-ARDVASWT------IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
+ G R W+ ++ ++ G + AR++FD+M +D ++N MI GY+ G
Sbjct: 144 QXHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYVKCG 203
Query: 191 CVGVAEDLFQKM--HDRDLTSWKQLINGLVN-SRRIDAAISYFKQMPETCEKTWNSIISV 247
+ A +LF M ++L SW +ING + +D A + F +MPE +WNS+I
Sbjct: 204 LIESARELFDLMPSEKKNLISWNSMINGYAQRADGVDIASNLFDEMPEKDLISWNSLIDG 263
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
+++G +++A +K P ++ +W ++ GY ++G V A +F+ M RDV +N M+
Sbjct: 264 YVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQMPQRDVVAYNSMM 323
Query: 308 FGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
G +N E + F M KES SPD T VL+ + L L +H ++
Sbjct: 324 AGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYTVEKKF 383
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+ A+I MY++CG+IQ A+ F + I WN++I GLA HG E A ++ +
Sbjct: 384 LLGGKLGVALIDMYSKCGSIQQAMGVFERIENKSIDHWNAMIGGLAIHGLGESAFDMLLQ 443
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
+ KPDDITFVGVL+ACS++GLV +G F+ MK K+ ++PR HY C+VD+L R G
Sbjct: 444 IERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMKRKHKIEPRLQHYGCMVDILSRSG 503
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
I+ A NL+ E+ IE + +W L AC H + GE+ + ++ N Y++
Sbjct: 504 RIELAKNLIEEM---PIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVL 560
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
L+ MY S G ++ +R+ MKE ++K PGCSWI+++ H F
Sbjct: 561 LSNMYASLGMWKEVRRVRTMMKERKIQKIPGCSWIELDGSVHEFF 605
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 208/420 (49%), Gaps = 32/420 (7%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGLMQSDNVQGAKEVF 75
D + +++++ + GF+ M + + D+F N +I ++ + A++VF
Sbjct: 122 DKFSLSLVLKACSRLGFVKEGMQXHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVF 181
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWNLVI-GALVNCQRMDL 132
D M RD V++NSMI GYV GLI+ A +F MP K+++SWN +I G +D+
Sbjct: 182 DRMSQRDSVSYNSMIDGYVKCGLIESARELFDLMPSEKKNLISWNSMINGYAQRADGVDI 241
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A + F EM +D+ SW +++G V+ GRI +A+ LFDKMP +DV W M+ GY G V
Sbjct: 242 ASNLFDEMPEKDLISWNSLIDGYVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFV 301
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSIISV 247
A+ LF +M RD+ ++ ++ G V +R AI F M + E T ++S
Sbjct: 302 HQAKSLFDQMPQRDVVAYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSA 361
Query: 248 LIRNGLVKEA---HSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+ + G + +A H Y +EK +I Y + G + A+ VFE + + + W
Sbjct: 362 IAQLGRLSKAMDMHLYTVEKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERIENKSIDHW 421
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLGRQ 356
N MI GL + LGE +Q++ PD+ TF VL CS L +L ++
Sbjct: 422 NAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMKR 481
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYH 414
H ++ M+ + +R G I+ A L+E + +D+I W + + ++H
Sbjct: 482 KHKIEPRLQH------YGCMVDILSRSGRIELAKNLIEEMPIEPNDVI-WRTFLTACSHH 534
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 191/397 (48%), Gaps = 25/397 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDMFTYNTVIAGLMQ-S 65
A+ +FD+M QRD+V++N MI GY K G +++A LF+ MP ++++ ++N++I G Q +
Sbjct: 177 ARQVFDRMSQRDSVSYNSMIDGYVKCGLIESARELFDLMPSEKKNLISWNSMINGYAQRA 236
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D V A +FD M +D+++WNS+I GYV +G I++A +F MP +DVV+W ++
Sbjct: 237 DGVDIASNLFDEMPEKDLISWNSLIDGYVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYA 296
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP-----AKDVQAWN 180
+ A+S F +M RDV ++ M+ G V+ +EA +F+ M + D
Sbjct: 297 KLGFVHQAKSLFDQMPQRDVVAYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLV 356
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN----SRRIDAAISYFKQMPET 236
++++ G + A D+ ++ +L L++ I A+ F+++
Sbjct: 357 IVLSAIAQLGRLSKAMDMHLYTVEKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERIENK 416
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYFEMGEVGSAIKVF 292
WN++I L +GL + A L + +I ++ V+ G V + F
Sbjct: 417 SIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCF 476
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEG-LKFFVQMKESGP-SPDNATFTSVLTICSDLPT 350
ELM + + +G + L G ++ + E P P++ + + LT CS
Sbjct: 477 ELMKRKHKIEPRLQHYGCMVDILSRSGRIELAKNLIEEMPIEPNDVIWRTFLTACSHHKE 536
Query: 351 LDLGRQIHAQAIKIA---RNQFTTVSNAMITMYARCG 384
+ G + I A + + +SN MYA G
Sbjct: 537 FETGELVAKHLILQAGYNPSSYVLLSN----MYASLG 569
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 143/302 (47%), Gaps = 41/302 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+++ RI++A++LFDKMP+RD VTW M+ GY K GF+ A LF+QMP+RD+ YN+++A
Sbjct: 265 VKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQMPQRDVVAYNSMMA 324
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G +Q+ A ++F+ ME ++ DE V V+S
Sbjct: 325 GYVQNRYHMEAIDIFNDMEKESHLS-------------PDETTLVI-------VLSAIAQ 364
Query: 121 IGALVNCQRMDL--AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+G L M L E F G VA +++ + G I +A +F+++ K +
Sbjct: 365 LGRLSKAMDMHLYTVEKKFLLGGKLGVA----LIDMYSKCGSIQQAMGVFERIENKSIDH 420
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMP 234
WN MI G +G A D+ ++ R D ++ ++N +S + + F+ M
Sbjct: 421 WNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMK 480
Query: 235 -----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVG-----YFEMG 283
E + + ++ +L R+G ++ A + +E+ P N W + FE G
Sbjct: 481 RKHKIEPRLQHYGCMVDILSRSGRIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETG 540
Query: 284 EV 285
E+
Sbjct: 541 EL 542
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 197/609 (32%), Positives = 312/609 (51%), Gaps = 40/609 (6%)
Query: 16 MPQRDTV-TWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGLMQSDNVQG 70
M R T WN +IRGY G + + ++NQM D T+ V+ + V+
Sbjct: 1 MHHRTTAFLWNTLIRGYSIAG-VGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRK 59
Query: 71 AKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL- 124
+EV G E DV N+++S Y G + +A RVF MP KD+VSWN +IG
Sbjct: 60 GREVHGSVVKLGFE-SDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFS 118
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLV---------REGRIVEARKLFDKMPAKD 175
VN A F+ M + +I ++ + + GR V + + + D
Sbjct: 119 VNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLES-D 177
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
+ N +I Y +G A ++F K+ +++ SW +I +R A+ +QM +
Sbjct: 178 IFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQD 237
Query: 236 TCE----KTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGS 287
E T+ +++ R GLV KE H+ + +N + Y + G +
Sbjct: 238 YGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKL 297
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A VF+ + RD +N++I G + E L F +M+ G DN +F L+ C++
Sbjct: 298 ARNVFD-TSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACAN 356
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
L + G++IH ++ + V+N+++ Y +CG I A F + D+ SWN++
Sbjct: 357 LTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTM 416
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
I G G + A++LFE MR D + D ++F+ VLSACS+ GL+++GR YFD +K +
Sbjct: 417 ILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARG- 475
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP--TVWGALLGACRIHNNIKV 525
++P HY C+VDLLGR GL++EA L+ G+ + P +WGALLGACRI+ N+++
Sbjct: 476 IEPTQMHYACMVDLLGRAGLMEEAAELIK-----GLPIVPDANIWGALLGACRIYGNLEL 530
Query: 526 GEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
A E + EL+P +SG Y +L+ MY GR ++A RI MK GVKK PGCSW+QI +
Sbjct: 531 AAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWVQIGE 590
Query: 586 GGHVFLSGD 594
H F+ G+
Sbjct: 591 QAHAFVVGE 599
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 215/473 (45%), Gaps = 45/473 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGF-----LDNAMCLFNQMPERDMFTYNTVIA 60
+++A +FD+MP++D V+WN MI + NG+ LD + ++ + + T ++ +
Sbjct: 92 LRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLP 151
Query: 61 GLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
L++ + + +EV G +R D+ NS+I Y +G EA VF+ + K+VV
Sbjct: 152 VLVELEFFKAGREV-HGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVV 210
Query: 116 SWNLVIGALVNCQRMDLAESYFKEM-GARDVASWTIMVN--------GLVREGRIVEARK 166
SWN +I + +A ++M ++ + N GLVR G+ + AR
Sbjct: 211 SWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARS 270
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ A D+ N + Y +G + +A ++F RD S+ LI G + +
Sbjct: 271 IHMGC-AFDLFVSNALTDMYAKSGHLKLARNVFDT-SLRDEVSYNILIVGHSQTSDCSES 328
Query: 227 ISYFKQMPETCEKTWN-SIISVL--------IRNGLVKEAHSY-LEKYPYSNIASWTNVI 276
+S F +M K N S + L I+ G KE H + L K + ++ +++
Sbjct: 329 LSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQG--KEIHGFLLRKLFHIHLFVANSLL 386
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G +G A +F+ MT +DV WN MI G G + + F M++ D+
Sbjct: 387 DFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSV 446
Query: 337 TFTSVLTICSDLPTLDLGR----QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
+F +VL+ CS L+ GR ++ A+ I+ + + M+ + R G ++ A
Sbjct: 447 SFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYA----CMVDLLGRAGLMEEAAEL 502
Query: 393 FSSVPI-HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+PI D W +++ +G E A E L + KP+ + +LS
Sbjct: 503 IKGLPIVPDANIWGALLGACRIYGNLELAAWAAE--HLFELKPEHSGYYTLLS 553
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 12/186 (6%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVI 59
RI A+N+FD+M +D +WN MI GY G LD A+ LF M E D ++ V+
Sbjct: 393 GRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVL 452
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEALRVFHGMPL-KDV 114
+ ++ ++ FD ++ R + + + M+ GL++EA + G+P+ D
Sbjct: 453 SACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDA 512
Query: 115 VSWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
W ++GA ++L A + E+ +T++ N GR EA ++ + M
Sbjct: 513 NIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELM 572
Query: 172 PAKDVQ 177
++ V+
Sbjct: 573 KSRGVK 578
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 196/665 (29%), Positives = 319/665 (47%), Gaps = 85/665 (12%)
Query: 6 IQEAQNLFDKMPQ-RDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTV-- 58
++ A+ +FD+MPQ D W ++ GY K G L + LF +M D +T + V
Sbjct: 145 LENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLK 204
Query: 59 -IAGL--------------------------------MQSDNVQGAKEVFDGMEVRDVVT 85
IAGL +S+ + A VFDGM RDV++
Sbjct: 205 CIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVIS 264
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLK-DVVSWNLVIGALVNCQRMDL------AESYFK 138
WNSMISG NGL D+A+ +F M L+ + + ++ L C + L Y
Sbjct: 265 WNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSV 324
Query: 139 EMGARDVASWT-IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+ G S ++++ K+F M K+V +W MI Y G
Sbjct: 325 KTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAG 384
Query: 198 LFQKMHDRDLTSWKQLINGLVNSR----RIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
LFQ+M GL +R I +A+ F + L+++G
Sbjct: 385 LFQEM-------------GLEGTRPDIFAITSALHAFAG-------------NELLKHG- 417
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
K H Y + + + TN ++ Y + G + A +F+ + ++D+ WN +I G
Sbjct: 418 -KSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSR 476
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N+L E F +M P+ T T +L + L +L+ GR++HA A++ + V
Sbjct: 477 NNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFV 535
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+NA+I MY +CG + A F + ++ISW ++ G HG A+ LFE+MR++
Sbjct: 536 ANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGI 595
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
PD +F +L ACS++GL D+G +FD M+ ++ ++PR HYTC+VDLL G + EA
Sbjct: 596 APDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAY 655
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
++ + IE ++W +LL CRIH N+K+ E ERV ELEP N+G Y++L +Y
Sbjct: 656 EFIDSM---PIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYA 712
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
R E +++ ++ G+++ GCSWI+ HVF++ + +HP+ R+ LN +
Sbjct: 713 EAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAK 772
Query: 613 EIERE 617
++ E
Sbjct: 773 RMQEE 777
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 214/484 (44%), Gaps = 59/484 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
++ R ++A +FD MP RD ++WN MI G NG D A+ LF +M E D T +
Sbjct: 243 KSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLS 302
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMIS-GYVCNGLID---------EALRVFH 107
V+ + +F G V IS + N L+D ++F
Sbjct: 303 VLPACAE------LHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFR 356
Query: 108 GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMV-----NGLVRE 158
M K+VVSW +I + D F+EMG D+ + T + N L++
Sbjct: 357 NMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKH 416
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G+ V + + M K + N ++ Y+ G + A+ +F + +D+ SW LI G
Sbjct: 417 GKSVHGYAIRNGME-KVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYS 475
Query: 219 NSRRIDAAISYFKQM-----PE----TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
+ + A S F +M P TC + +S L R +E H+Y + Y
Sbjct: 476 RNNLANEAFSLFTEMLLQLRPNAVTMTCILPAAASLSSLERG---REMHAYALRRGYLED 532
Query: 270 ASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
N ++ Y + G + A ++F+ ++ +++ W +M+ G G + G + + F QM+
Sbjct: 533 DFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRV 592
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLG-------RQIHAQAIKIARNQFTTVSNAMITMYA 381
SG +PD A+F+++L CS D G R+ H I+ +T M+ +
Sbjct: 593 SGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEH--KIEPRLKHYT----CMVDLLI 646
Query: 382 RCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
GN++ A S+PI D W S++ G H + A E+ E R+ + +P++ +
Sbjct: 647 NTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAE--RVFELEPENTGYY 704
Query: 441 GVLS 444
+L+
Sbjct: 705 VLLA 708
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 202/744 (27%), Positives = 337/744 (45%), Gaps = 129/744 (17%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF------------NQMPE--- 49
R + +FD+MP R WN MI Y NG +A+ L+ + P
Sbjct: 94 RAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLK 153
Query: 50 -----RDM-------------------FTYNTVIAGLMQSDNVQGAKEVFDGMEVR-DVV 84
RD+ F N +++ ++D++ A+ +FDG + + D V
Sbjct: 154 ACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAV 213
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPL--------------------------------- 111
WNS++S Y +G E L +F M +
Sbjct: 214 LWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASV 273
Query: 112 -------KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEA 164
++ N +I C +M AE ++M DV +W ++ G V+ EA
Sbjct: 274 LKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEA 333
Query: 165 RKLFDKMPA---------------------------------------KDVQAWNLMIAG 185
+ F M A ++Q N +I
Sbjct: 334 LEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDM 393
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF----KQMPETCEKTW 241
Y F +MHD+DL SW +I G + A+ F K+ E E
Sbjct: 394 YSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL 453
Query: 242 NSII---SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
SI+ SVL +VKE H ++ + + ++ Y + +G A +VFE + +
Sbjct: 454 GSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGK 513
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
DV W MI N E ++ F +M E+G S D+ +L+ + L L+ GR+IH
Sbjct: 514 DVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIH 573
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
++ +++ A++ MYA CG++QSA F + ++ + S+I HG +
Sbjct: 574 CYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGK 633
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
A+ELF++MR + PD I+F+ +L ACS+AGL+D+GR + M+++Y L+P HY C+
Sbjct: 634 AAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCL 693
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
VD+LGR + EA + ++ E + VW ALL ACR H+ ++GEIA +R++ELEP
Sbjct: 694 VDMLGRANCVVEAFEFVKMMKT---EPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEP 750
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
N G ++++ ++ GR D +++ A+MK +G++K PGCSWI+++ H F + D SHP
Sbjct: 751 KNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHP 810
Query: 599 KFHRLRYLLNLLHTEIEREILFDA 622
+ + L+ + ++ERE+ + A
Sbjct: 811 ESKEIYEKLSEVTRKLEREVGYVA 834
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 172/537 (32%), Positives = 273/537 (50%), Gaps = 33/537 (6%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+D F + + N VF+G+ V WN+ I GY N + + +F
Sbjct: 54 HQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIR 113
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
M D V +L+ ++ K G ++ G+ G V
Sbjct: 114 MKRSDAVPDKFTYPSLI--------KACSKVCGVKE---------GVAFHGSAVRCGV-- 154
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
DV +I Y G + A +F +M +R++ SW +I G + + A
Sbjct: 155 ----GGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARK 210
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
F +MPE +WN+IIS ++ G ++ A ++ P+ N+ S+T +I GY + G++ SA
Sbjct: 211 LFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASA 270
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
VFE RDV W+ +I G +N E +K F++M PD S+++ CS +
Sbjct: 271 RFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQM 330
Query: 349 PTLDLGR----QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
+L+L + + +I + R V A+I M A+CG++ A F +P D+IS+
Sbjct: 331 GSLELAKWVDDYVRKSSIDVHRAH---VIAALIDMNAKCGSMDRATKLFEEMPKRDLISY 387
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
S++ GL+ HG +A+ LF RM PDD+ F +L+ACS AGLVD+G YYF+ MK
Sbjct: 388 CSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKT 447
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
Y + P HY C+VDLLGR G + EA LL + +E WGALLGAC++H +I+
Sbjct: 448 DYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSM---PVEPHAGAWGALLGACKLHCDIE 504
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
+GE+ +++ ELEP N+G Y++L+ +Y + + D + +M+E G++K PGCSWI
Sbjct: 505 LGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 200/453 (44%), Gaps = 79/453 (17%)
Query: 11 NLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLMQSD 66
++F+ + TV WN I+GY +N + + LF +M D FTY ++I +
Sbjct: 78 SVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVC 137
Query: 67 NVQ-----------------------------------GAKEVFDGMEVRDVVTWNSMIS 91
V+ A++VFD M R+VV+W +MI+
Sbjct: 138 GVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIA 197
Query: 92 GYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIM 151
GY + EA ++F MP K+ VSWN +I V C + A F EM R+V S+T M
Sbjct: 198 GYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTM 257
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
++G + G + AR +F++ P +DV AW+ +I+GY+ NG A +F +M R++ +
Sbjct: 258 IDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDE 317
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
++ L+++ ++ K + + K+ SI V AH
Sbjct: 318 FIMVSLMSACSQMGSLELAKWVDDYVRKS--SID--------VHRAH------------- 354
Query: 272 WTNVIVGYFEM----GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
VI +M G + A K+FE M RD+ + M+ GL + G + + F +M
Sbjct: 355 ---VIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRML 411
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-----AMITMYAR 382
G +PD+ FT +LT CS +D G + + ++ V + M+ + R
Sbjct: 412 NEGLTPDDVAFTVILTACSRAGLVDEG----CYYFESMKTDYSIVPSPDHYACMVDLLGR 467
Query: 383 CGNIQSALLEFSSVPIHDII-SWNSIICGLAYH 414
G ++ A S+P+ +W +++ H
Sbjct: 468 AGRLKEAYELLKSMPVEPHAGAWGALLGACKLH 500
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 163/320 (50%), Gaps = 43/320 (13%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDN 67
EA+ LFD+MP+++ V+WN +I GY K G L +A +F++MP R++ ++ T+I G +S +
Sbjct: 207 EARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGD 266
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC 127
+ A+ VF+ RDVV W+++ISGYV NG +EA+++F M ++V ++ +L+
Sbjct: 267 MASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLM-- 324
Query: 128 QRMDLAESYFKEMGARDVASW------------------TIMVNGLVREGRIVEARKLFD 169
S +MG+ ++A W +++ + G + A KLF+
Sbjct: 325 -------SACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFE 377
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDA 225
+MP +D+ ++ M+ G +GC A LF +M + LT ++ ++ + +D
Sbjct: 378 EMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDE 437
Query: 226 AISYFKQMPE-----TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY- 279
YF+ M + ++ +L R G +KEA+ L+ P A ++G
Sbjct: 438 GCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGAC 497
Query: 280 -----FEMGEVGSAIKVFEL 294
E+GEV A ++FEL
Sbjct: 498 KLHCDIELGEV-VADQLFEL 516
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 116/272 (42%), Gaps = 30/272 (11%)
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
++ +++L C+ TL+ Q+HA+ I+ +Q + + +T+ N F+
Sbjct: 25 TSSISTLLKACTTTSTLE---QVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFN 81
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
V + WN+ I G + + + LF RM+ +D PD T+ ++ ACS V +
Sbjct: 82 GVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKE 141
Query: 455 GRYYFDC-----MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
G + + F+ T ++DL G+ G I A + +E+ E +
Sbjct: 142 GVAFHGSAVRCGVGGDVFVM------TSLIDLYGKCGEILCARKVFDEMG----ERNVVS 191
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGV-YLILTEMYLSCGRREDAKRIFAQMK 568
W A++ +++ + ++ + P + V + + Y+ CG A+++F +M
Sbjct: 192 WTAMIAGYASFSDL----VEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMP 247
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
V S+ + DG SGD + +F
Sbjct: 248 HRNV-----VSFTTMIDG--YAKSGDMASARF 272
>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 611
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 186/604 (30%), Positives = 299/604 (49%), Gaps = 66/604 (10%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS-- 65
AQ LFDKMPQ + W + Y ++G D + + M D+ N V ++++
Sbjct: 48 SAQRLFDKMPQPNVYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACT 107
Query: 66 ------DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+ K+V ++ NS+I YV G A VF M +D+ SWN
Sbjct: 108 QLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNS 167
Query: 120 VIGA------------LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
+I L+NC R+D E DV +W +++ + GR EA ++
Sbjct: 168 MISGYVSNGLADLAVELLNCMRLDGFEP--------DVVTWNTLMDAYCQMGRFDEAWEV 219
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS--WKQLINGLVNSRRIDA 225
++ ++ +W +I+ Y G ++ +FQ M R++ S L + LV+ R I A
Sbjct: 220 LKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGA 279
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI---ASWTNVIVGYFEM 282
+R+G KE H Y K + + ++ ++ Y +
Sbjct: 280 -----------------------LRSG--KEIHGYGTKMETNTVFYSSAGAALLTMYAKC 314
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G + AI VFELM D+ WN MI G E DLG++ ++ F +M+ D T +++L
Sbjct: 315 GRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTIL 374
Query: 343 TICSDLPTLDLGRQIHAQAIK-IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
+C L G IHA K I + TV NA+I MY +CG ++SA F S+P D+
Sbjct: 375 PVCD----LQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDV 430
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
+SWN++I G HG+ + AL+L + M L+ P+ TF VLSACS++GLVD+G F
Sbjct: 431 VSWNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRS 490
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
M Y + PR HY+C+VD+L R G +A+ ++++ +E ++WGALL ACR +
Sbjct: 491 MTEDYSITPRMEHYSCIVDMLARAGQFADAVTFIHKM---PLEPDKSIWGALLAACRAYQ 547
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
N+ G +A E+++ +EP +G Y+ L+ +Y GR +DA R+ +++ G+ K G S I
Sbjct: 548 NLDFGRLAAEQLIRMEPKCAGHYVTLSNIYARAGRWDDAGRVRKEIEGKGLVKPSGQSLI 607
Query: 582 QIND 585
+ D
Sbjct: 608 ETRD 611
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 140/522 (26%), Positives = 233/522 (44%), Gaps = 81/522 (15%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTV 58
NAR A+ +F++M +RD +WN MI GY NG D A+ L N M E D+ T+NT+
Sbjct: 146 NAR--SARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTL 203
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
+ Q A EV +E ++++W ++IS Y G D +LRVF M +++VVS +
Sbjct: 204 MDAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPD 263
Query: 119 L--VIGALVNCQRMDLAES------YFKEMGARDV---ASWTIMVNGLVREGRIVEARKL 167
L + LV+C+ + S Y +M V ++ ++ + GRI +A +
Sbjct: 264 LDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINV 323
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
F+ M D+ WN MI G+++ A + F++M D+ + + I+ ++
Sbjct: 324 FELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTIL--------- 374
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGS 287
C+ + + I +R + S + W VI Y + G V S
Sbjct: 375 -------PVCDLQYGNPIHAYVRKSITLS----------SVVTVWNAVIHMYCKCGCVRS 417
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A +F M +DV WN MI G G + G+ LK +M SG P++ TFTSVL+ CS
Sbjct: 418 AYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSH 477
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
+D G ++ +S ++S P + ++ I
Sbjct: 478 SGLVDEGFRL----------------------------FRSMTEDYSITPRME--HYSCI 507
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
+ LA G A+ +M L +PD + +L+AC +D GR + +
Sbjct: 508 VDMLARAGQFADAVTFIHKMPL---EPDKSIWGALLAACRAYQNLDFGRLAAEQLIR--- 561
Query: 468 LQPRSA-HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
++P+ A HY + ++ R G D+A + EI G+ V P+
Sbjct: 562 MEPKCAGHYVTLSNIYARAGRWDDAGRVRKEIEGKGL-VKPS 602
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 103/262 (39%), Gaps = 43/262 (16%)
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
+L +CS+L +L G+QIH Q + + +I MYA C ++ SA F +P +
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY------------ 448
+ +W +I HG +K ++ + M+ +D PD+ F VL AC+
Sbjct: 61 VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHK 120
Query: 449 -----------------------AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRF 485
G R F+ M+ + S V +
Sbjct: 121 DVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSN----- 175
Query: 486 GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL 545
GL D A+ LLN +R DG E W L+ A + + + A E + ++E N +
Sbjct: 176 GLADLAVELLNCMRLDGFEPDVVTWNTLMDA---YCQMGRFDEAWEVLKQIEQPNIISWT 232
Query: 546 ILTEMYLSCGRREDAKRIFAQM 567
L Y G + + R+F M
Sbjct: 233 TLISSYSKIGEHDMSLRVFQDM 254
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 198/653 (30%), Positives = 308/653 (47%), Gaps = 63/653 (9%)
Query: 23 TWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME--- 79
T N +I GY K G + A +F + +RD ++NT+IAG + N + A E M+
Sbjct: 36 TANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYG 95
Query: 80 -VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-----DVVSWNLVIGALVNCQRMDLA 133
D ++ S++ G C G ++ +V H M +K +V + + ++ C+R++ A
Sbjct: 96 FAVDGYSFGSILKGVACVGYVEVGQQV-HSMMVKMGYEGNVFAGSALLDMYAKCERVEDA 154
Query: 134 ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP--------------------- 172
FK + R+ +W +++G + G A L D M
Sbjct: 155 FEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDP 214
Query: 173 ------------------AKDVQAWNLMIAGYLDNGCVGVAEDLFQ-KMHDRDLTSWKQL 213
A D N +I Y + G + AE +F + RDL +W +
Sbjct: 215 DLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSM 274
Query: 214 INGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLI---RNGLVKEAHSYLEKYPY 266
+ + + + + A F +M E T+ S+IS G K H + K
Sbjct: 275 LAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGL 334
Query: 267 SNIASWTNVIVGYFEMGEVGS---AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
+ +N ++ + S A+ +FE + +D WN ++ G ++ L E+ LKFF
Sbjct: 335 EFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFF 394
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
M+ D+ F++VL CSDL TL LG+Q+H +K V++++I MY++C
Sbjct: 395 ENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKC 454
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G I+ A F + P I+WNS+I G A HG + AL+LF M+ K D ITFV VL
Sbjct: 455 GVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVL 514
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
+ACS+ GLV++G + M++ Y + PR HY C++DLLGR G +DEA L I A
Sbjct: 515 TACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKAL---IEAMPF 571
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI 563
E VW LLGACR +I++ ++ELEP Y++L+ M+ R + I
Sbjct: 572 EPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASI 631
Query: 564 FAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
MKE GVKK PG SWI++ + F + D SHP + L L EI R
Sbjct: 632 KRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELMEEIRR 684
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/494 (22%), Positives = 199/494 (40%), Gaps = 97/494 (19%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP---------------- 48
R+++A +F + R++VTWN +I GY + G A L + M
Sbjct: 150 RVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLT 209
Query: 49 -----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDG-MEVRDVV 84
D N +I + +++ A+ VFDG +E RD+V
Sbjct: 210 LLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLV 269
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESYFKEM 140
TWNSM++ Y+ N +EA ++F M + D+ ++ VI A +S
Sbjct: 270 TWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKS----- 324
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE--DL 198
++GLV + R L +P N +IA YL + + E ++
Sbjct: 325 -----------LHGLVIK------RGLEFLVPIS-----NSLIAMYLKSHSKSMDEALNI 362
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN------- 251
F+ + ++D SW ++ G S + A+ +F+ M + S ++R+
Sbjct: 363 FESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATL 422
Query: 252 GLVKEAHSYLEKY---PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
L ++ H + K P +AS ++I Y + G + A K F+ WN +IF
Sbjct: 423 QLGQQVHVLVLKSGFEPNGFVAS--SLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIF 480
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
G ++ G+ L F MK+ D+ TF +VLT CS + ++ G +K +
Sbjct: 481 GYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSF----LKSMESD 536
Query: 369 FTTVSN-----AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALE 422
+ MI + R G + A ++P D + W +++ G E A +
Sbjct: 537 YGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQ 596
Query: 423 LFERMRLTDFKPDD 436
+ L + +P++
Sbjct: 597 VAS--HLLELEPEE 608
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%)
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
++I + N+I GY + GE+ A K+F + RD WN MI G E L+F M
Sbjct: 32 ASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSM 91
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
K G + D +F S+L + + +++G+Q+H+ +K+ +A++ MYA+C +
Sbjct: 92 KRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERV 151
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
+ A F S+ I + ++WN++I G A G A L + M L + DD TF
Sbjct: 152 EDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTF 204
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%)
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H AIK +N +I+ YA+CG I+ A F D +SWN++I G G
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
E ALE + M+ F D +F +L + G V+ G+
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQ 120
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 162/461 (35%), Positives = 254/461 (55%), Gaps = 28/461 (6%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G +V AR LFDKM +DV +W+ MI Y+ LF R + SW +I G +
Sbjct: 158 GSLVSARLLFDKMSERDVVSWSTMIRAYIT---------LFYGFSQRSIVSWTAMIAGYI 208
Query: 219 NSRRIDAAISYFKQMPETCEKTWN---SIISVLIRNGLV------KEAHSYLEKYPYS-N 268
++ F +M E E + +++S++I G V K H+Y+ + + +
Sbjct: 209 RCNDLEEGERLFVRMIE--ENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMS 266
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+A T ++ Y + GE+ SA +F+ M +DV W MI + + + + FVQM++
Sbjct: 267 LALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRD 326
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
+G P+ T S+L++C+ LD+G+ HA K + A+I MYA+CG+I
Sbjct: 327 NGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISG 386
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A FS DI +WN ++ G HGY EKAL+LF M KP+DITF+G L ACS+
Sbjct: 387 AQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSH 446
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP- 507
AGLV +G+ F+ M + + L P+ HY C+VDLLGR GL+DEA ++ + + V+P
Sbjct: 447 AGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMI-----ESMPVTPN 501
Query: 508 -TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
+WGA+L AC+IH N +GE+A ++ LEP N G ++++ +Y + R D +
Sbjct: 502 IAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKA 561
Query: 567 MKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
+K+ G+KKEPG S I++N H F GD++HP ++ +L
Sbjct: 562 VKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEML 602
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 188/414 (45%), Gaps = 60/414 (14%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D N +++ Y + G L +A LF++M ERD+ +++T+I + +F G
Sbjct: 143 DVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYIT---------LFYGFS 193
Query: 80 VRDVVTWNSMISGYV-CNGLIDEALRVFHGMPLKDVVSWNLVIGAL-VNC------QRMD 131
R +V+W +MI+GY+ CN L +E R+F M ++V ++ + +L ++C Q
Sbjct: 194 QRSIVSWTAMIAGYIRCNDL-EEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGK 252
Query: 132 LAESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
+Y G +A T +V+ + G I AR +FD M KDV W MI+ Y
Sbjct: 253 RLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQAN 312
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
C+ A LF +M D NG+ + E T S++S+
Sbjct: 313 CIDYAFQLFVQMRD----------NGVRPN-----------------ELTMVSLLSLCAV 345
Query: 251 NGLV---KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVM 306
NG + K H+Y++K ++ T +I Y + G++ A ++F RD+ WNVM
Sbjct: 346 NGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVM 405
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
+ G G + GE+ LK F +M+ G P++ TF L CS + G+ + + I
Sbjct: 406 MAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMI---- 461
Query: 367 NQFTTVSN-----AMITMYARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYH 414
+ F V M+ + R G + A S+P+ +I W +++ H
Sbjct: 462 HDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIH 515
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 133/325 (40%), Gaps = 78/325 (24%)
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L + M++ D+ SVL CS + +G++IH ++K V NA++
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICG--LAYHGYAEKAL--------------- 421
MY+ CG++ SA L F + D++SW+++I ++G++++++
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 422 -----ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG--------------------- 455
LF RM + P+DIT + ++ +C + G V G
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272
Query: 456 --------------RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
R FD MKNK + +T ++ + ID A L ++R +
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMT-----WTAMISAYAQANCIDYAFQLFVQMRDN 327
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL------ILTEMYLSCG 555
G+ + +LL C ++ + +G+ + + GV + L +MY CG
Sbjct: 328 GVRPNELTMVSLLSLCAVNGALDMGKWFHAYI-----DKQGVEVDVILKTALIDMYAKCG 382
Query: 556 RREDAKRIFAQMKENGVKKEPGCSW 580
A+R+F++ + + C+W
Sbjct: 383 DISGAQRLFSEAIDRDI-----CTW 402
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 139/347 (40%), Gaps = 87/347 (25%)
Query: 9 AQNLFDKMPQRDTVTWNVMIR----------------------GYFKNGFLDNAMCLFNQ 46
A+ LFDKM +RD V+W+ MIR GY + L+ LF +
Sbjct: 163 ARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVR 222
Query: 47 MPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWN----------SMISGYVCN 96
M E ++F + + L+ S GA ++ G + + N +++ Y
Sbjct: 223 MIEENVFPNDITMLSLIISCGFVGAVQL--GKRLHAYILRNGFGMSLALATALVDMYGKC 280
Query: 97 GLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM---------------- 140
G I A +F M KDV++W +I A +D A F +M
Sbjct: 281 GEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLL 340
Query: 141 ------GARDVASW-----------------TIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
GA D+ W T +++ + G I A++LF + +D+
Sbjct: 341 SLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDIC 400
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMH-----DRDLTSWKQL----INGLVNSRR--IDAA 226
WN+M+AGY +G A LF +M D+T L GLV + +
Sbjct: 401 TWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKM 460
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASW 272
I F +P+ + + ++ +L R GL+ EA+ +E P + NIA W
Sbjct: 461 IHDFGLVPKV--EHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIW 505
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 93/233 (39%), Gaps = 49/233 (21%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------- 48
+ I+ A+ +FD M +D +TW MI Y + +D A LF QM
Sbjct: 279 KCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVS 338
Query: 49 --------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
E D+ +I + ++ GA+ +F RD
Sbjct: 339 LLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRD 398
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQRMDLA-------E 134
+ TWN M++GY +G ++AL++F M V ++ IGAL C L E
Sbjct: 399 ICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFE 458
Query: 135 SYFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMP-AKDVQAWNLMIAG 185
+ G V + MV+ L R G + EA K+ + MP ++ W M+A
Sbjct: 459 KMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I AQ LF + RD TWNVM+ GY +G+ + A+ LF +M + + G + +
Sbjct: 384 ISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHA 443
Query: 66 DNVQG----AKEVFDGM-----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL-KDVV 115
+ G K +F+ M V V + M+ GL+DEA ++ MP+ ++
Sbjct: 444 CSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIA 503
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGA 142
W ++ A + ++ E +E+ A
Sbjct: 504 IWGAMLAACKIHKNSNMGELAARELLA 530
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 202/640 (31%), Positives = 324/640 (50%), Gaps = 36/640 (5%)
Query: 8 EAQNLFDKMPQRDTVT-WNVMIRGYFKNGFLDNAMCLFNQM---P--ERDMFTYNTVIAG 61
A+ +FD M ++ WN ++ GY KN A+ LF ++ P + D +TY +V
Sbjct: 56 HAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKA 115
Query: 62 LMQSDNVQGAKEVFDGM----EVRDVVTWNSMISGY-VCNGLIDEALRVFHGMPLKDVVS 116
K + + + D+V +S++ Y CN ++A+ +F+ MP KDV
Sbjct: 116 CGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAF-EKAIWLFNEMPEKDVAC 174
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE-GRIVEARK-------LF 168
WN VI A YF M ++ + + R+++ + L
Sbjct: 175 WNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELI 234
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+ D + ++ Y G + +A ++F++M + + +W +I+G I + I
Sbjct: 235 NSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQ 294
Query: 229 YFKQMPETCEK----TWNSIISVLIRNGLVKEA---HSY-LEKYPYSNIASWTNVIVGYF 280
FK+M K T +S+I V R+ + E H Y + ++ ++++ YF
Sbjct: 295 LFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYF 354
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G+V A K+F+L+ V WNVMI G E L F +M++S D TFTS
Sbjct: 355 KCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTS 414
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
VLT CS L L+ G++IH I+ + V A++ MYA+CG + A F +P D
Sbjct: 415 VLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRD 474
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
++SW S+I HG+A ALELF M ++ KPD + F+ +LSAC +AGLVD+G YYF+
Sbjct: 475 LVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFN 534
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN---EIRADGIEVSPTVWGALLGAC 517
M N Y + PR HY+C++DLLGR G + EA +L EIR D +E+ T L AC
Sbjct: 535 QMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIR-DDVELLST----LFSAC 589
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
R+H NI +G +++ +P++S Y++L+ MY S + ++ + + ++MKE G+KK PG
Sbjct: 590 RLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPG 649
Query: 578 CSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
CSWI+IN F D+SH + L+ L +E E
Sbjct: 650 CSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMEDE 689
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 140/322 (43%), Gaps = 60/322 (18%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------P------- 48
+ ++ A +F++MP++ V WN MI GY G + + + LF +M P
Sbjct: 254 KCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSS 313
Query: 49 --------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
+ D+F ++++ + V+ A+++F +
Sbjct: 314 LIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSK 373
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESYFK 138
VV+WN MISGYV G + EAL +F M D +++ V+ A ++ +
Sbjct: 374 VVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHN 433
Query: 139 EMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ + + + +++ L+ + G + EA +F +P +D+ +W MI Y +G
Sbjct: 434 LIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYG 493
Query: 195 AEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQM-------PETCEKTWNS 243
A +LF +M D ++ +++ ++ +D YF QM P + ++
Sbjct: 494 ALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRV--EHYSC 551
Query: 244 IISVLIRNGLVKEAHSYLEKYP 265
+I +L R G + EA+ L++ P
Sbjct: 552 LIDLLGRAGRLHEAYEILQQNP 573
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 191/658 (29%), Positives = 317/658 (48%), Gaps = 75/658 (11%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------------------- 47
+A+ +FD M +RD V WNVM+ GY K G + +A+ LF M
Sbjct: 199 DARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSA 258
Query: 48 PERDMF-------------------TYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
E D+F NT+++ + + ++F M D+VTWN
Sbjct: 259 TESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNG 318
Query: 89 MISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNC----QRMDLAESYFKEM 140
MISG V NG +D+AL +F M D V+ ++ AL + Q +L +
Sbjct: 319 MISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNC 378
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
DV + +V+ + + A+ ++D A DV + MI+GY+ NG A +F+
Sbjct: 379 VHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFR 438
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
+ ++ + I ++ + AA+ L +E HSY
Sbjct: 439 YLLEQGIRPNAVAIASVLPACASMAAMK------------------------LGQELHSY 474
Query: 261 LEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
K Y + ++ Y + G + + +F ++ +D WN MI +N EE
Sbjct: 475 ALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEA 534
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
L F +M G N T +SVL+ C+ LP + G++IH IK +A+I M
Sbjct: 535 LNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDM 594
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y +CGN++ A F S+P + +SWNSII +G ++++ L M+ FK D +TF
Sbjct: 595 YGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTF 654
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+ ++SAC++AG V +G F CM +Y + PR H+ C+VDL R G +D+AM L+ ++
Sbjct: 655 LALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDM- 713
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRED 559
+ +WGALL ACR+H N+++ EIA + + +L+P+NSG Y++++ + GR +
Sbjct: 714 --PFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDG 771
Query: 560 AKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
++ MK+ V+K PG SW+ +N+ H+F++ D SHP + L + E+ E
Sbjct: 772 VSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREE 829
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 177/442 (40%), Gaps = 75/442 (16%)
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE---TCEKTWNSIISVLIRNGLVKEAH 258
+H D +L+ V +RR A++ F +P C WN +I L G + A
Sbjct: 70 LHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSAL 129
Query: 259 SYLEKY------PYSNIASWTNVI-----VGYFEMGE----------------VGSAI-- 289
+ K P + ++ V+ +G +G VGSA+
Sbjct: 130 LFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIK 189
Query: 290 ------------KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
+VF+ M RD +WNVM+ G + ++ F M+ SG P+ AT
Sbjct: 190 MYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFAT 249
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
L++ + L G Q+H A+K V+N +++MYA+C + F +P
Sbjct: 250 LACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP 309
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR- 456
D+++WN +I G +G+ ++AL LF M+ + +PD +T V +L A + +QG+
Sbjct: 310 RDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKE 369
Query: 457 ----------------------YYFDC----MKNKYFLQPRSAHYTCVVDLLGRF---GL 487
YF C M + ++ ++ + G+
Sbjct: 370 LHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGM 429
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLI 546
EA+ + + GI + ++L AC +K+G E+ + V
Sbjct: 430 SQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESA 489
Query: 547 LTEMYLSCGRREDAKRIFAQMK 568
L +MY CGR + + IF+++
Sbjct: 490 LMDMYAKCGRLDLSHYIFSKIS 511
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 158/382 (41%), Gaps = 92/382 (24%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------------- 50
+ + LF MP+ D VTWN MI G +NGF+D A+ LF M +
Sbjct: 298 LDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPA 357
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
D+F + ++ + V+ A+ V+D + DVV
Sbjct: 358 LTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIG 417
Query: 87 NSMISGYVCNGLIDEALRVF----------------------------------HGMPLK 112
++MISGYV NG+ EA+++F H LK
Sbjct: 418 STMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALK 477
Query: 113 DVVSWNLVI-GALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
+ + AL++ C R+DL+ F ++ A+D +W M++ + G EA L
Sbjct: 478 NAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNL 537
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK-MHD--------RDLTSWKQLINGLV 218
F +M + V+ N+ I+ L + C + + K +H DL + LI+
Sbjct: 538 FREMCMEGVKYSNVTISSVL-SACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYG 596
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL----EKYPYSNIASWTN 274
++ A F+ MPE E +WNSII+ GLVKE+ S L E+ ++ ++
Sbjct: 597 KCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLA 656
Query: 275 VIVGYFEMGEVGSAIKVFELMT 296
++ G+V +++F MT
Sbjct: 657 LVSACAHAGQVQEGLRLFRCMT 678
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 24/246 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ R+ + +F K+ +D VTWN MI + +NG + A+ LF +M + N I+
Sbjct: 496 KCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISS 555
Query: 62 LMQSDNVQGAKEVFDGMEVRDVV----------TWNSMISGYVCNGLIDEALRVFHGMPL 111
++ + ++ G E+ VV +++I Y G ++ A RVF MP
Sbjct: 556 VLSA--CASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPE 613
Query: 112 KDVVSWNLVIGA-----LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARK 166
K+ VSWN +I + LV + + L +E D ++ +V+ G++ E +
Sbjct: 614 KNEVSWNSIIASYGAYGLVK-ESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLR 672
Query: 167 LFDKMP-----AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR-DLTSWKQLINGLVNS 220
LF M A ++ + M+ Y G + A +L M + D W L++
Sbjct: 673 LFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVH 732
Query: 221 RRIDAA 226
R ++ A
Sbjct: 733 RNVELA 738
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 7/130 (5%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF-TTVSNAMITMYARCGNIQSALL 391
PD +VL C L LG Q+H +A+ + T + ++ MY + A+
Sbjct: 38 PDR-RLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA 96
Query: 392 EFSSVP---IHDIISWNSIICGLAYHGYAEKALELFERM--RLTDFKPDDITFVGVLSAC 446
FSS+P + WN +I GL G AL + +M + PD TF V+ +C
Sbjct: 97 VFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSC 156
Query: 447 SYAGLVDQGR 456
+ G + GR
Sbjct: 157 AALGAIALGR 166
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 191/658 (29%), Positives = 317/658 (48%), Gaps = 75/658 (11%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------------------- 47
+A+ +FD M +RD V WNVM+ GY K G + +A+ LF M
Sbjct: 199 DARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSA 258
Query: 48 PERDMF-------------------TYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
E D+F NT+++ + + ++F M D+VTWN
Sbjct: 259 TESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNG 318
Query: 89 MISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNC----QRMDLAESYFKEM 140
MISG V NG +D+AL +F M D V+ ++ AL + Q +L +
Sbjct: 319 MISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNC 378
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
DV + +V+ + + A+ ++D A DV + MI+GY+ NG A +F+
Sbjct: 379 VHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFR 438
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
+ ++ + I ++ + AA+ L +E HSY
Sbjct: 439 YLLEQGIRPNAVAIASVLPACASMAAMK------------------------LGQELHSY 474
Query: 261 LEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
K Y + ++ Y + G + + +F ++ +D WN MI +N EE
Sbjct: 475 ALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEA 534
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
L F +M G N T +SVL+ C+ LP + G++IH IK +A+I M
Sbjct: 535 LNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDM 594
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y +CGN++ A F S+P + +SWNSII +G ++++ L M+ FK D +TF
Sbjct: 595 YGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTF 654
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+ ++SAC++AG V +G F CM +Y + PR H+ C+VDL R G +D+AM L+ ++
Sbjct: 655 LALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMP 714
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRED 559
+ +WGALL ACR+H N+++ EIA + + +L+P+NSG Y++++ + GR +
Sbjct: 715 ---FKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDG 771
Query: 560 AKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
++ MK+ V+K PG SW+ +N+ H+F++ D SHP + L + E+ E
Sbjct: 772 VSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREE 829
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 177/442 (40%), Gaps = 75/442 (16%)
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE---TCEKTWNSIISVLIRNGLVKEAH 258
+H D +L+ V +RR A++ F +P C WN +I L G + A
Sbjct: 70 LHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSAL 129
Query: 259 SYLEKY------PYSNIASWTNVI-----VGYFEMGE----------------VGSAI-- 289
+ K P + ++ V+ +G +G VGSA+
Sbjct: 130 LFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIK 189
Query: 290 ------------KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
+VF+ M RD +WNVM+ G + ++ F M+ SG P+ AT
Sbjct: 190 MYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFAT 249
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
L++ + L G Q+H A+K V+N +++MYA+C + F +P
Sbjct: 250 LACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP 309
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR- 456
D+++WN +I G +G+ ++AL LF M+ + +PD +T V +L A + +QG+
Sbjct: 310 RDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKE 369
Query: 457 ----------------------YYFDC----MKNKYFLQPRSAHYTCVVDLLGRF---GL 487
YF C M + ++ ++ + G+
Sbjct: 370 LHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGM 429
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLI 546
EA+ + + GI + ++L AC +K+G E+ + V
Sbjct: 430 SQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESA 489
Query: 547 LTEMYLSCGRREDAKRIFAQMK 568
L +MY CGR + + IF+++
Sbjct: 490 LMDMYAKCGRLDLSHYIFSKIS 511
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 158/382 (41%), Gaps = 92/382 (24%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------------- 50
+ + LF MP+ D VTWN MI G +NGF+D A+ LF M +
Sbjct: 298 LDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPA 357
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
D+F + ++ + V+ A+ V+D + DVV
Sbjct: 358 LTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIG 417
Query: 87 NSMISGYVCNGLIDEALRVF----------------------------------HGMPLK 112
++MISGYV NG+ EA+++F H LK
Sbjct: 418 STMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALK 477
Query: 113 DVVSWNLVI-GALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
+ + AL++ C R+DL+ F ++ A+D +W M++ + G EA L
Sbjct: 478 NAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNL 537
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK-MHD--------RDLTSWKQLINGLV 218
F +M + V+ N+ I+ L + C + + K +H DL + LI+
Sbjct: 538 FREMCMEGVKYSNVTISSVL-SACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYG 596
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL----EKYPYSNIASWTN 274
++ A F+ MPE E +WNSII+ GLVKE+ S L E+ ++ ++
Sbjct: 597 KCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLA 656
Query: 275 VIVGYFEMGEVGSAIKVFELMT 296
++ G+V +++F MT
Sbjct: 657 LVSACAHAGQVQEGLRLFRCMT 678
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 24/246 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ R+ + +F K+ +D VTWN MI + +NG + A+ LF +M + N I+
Sbjct: 496 KCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISS 555
Query: 62 LMQSDNVQGAKEVFDGMEVRDVV----------TWNSMISGYVCNGLIDEALRVFHGMPL 111
++ + ++ G E+ VV +++I Y G ++ A RVF MP
Sbjct: 556 VLSA--CASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPE 613
Query: 112 KDVVSWNLVIGA-----LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARK 166
K+ VSWN +I + LV + + L +E D ++ +V+ G++ E +
Sbjct: 614 KNEVSWNSIIASYGAYGLVK-ESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLR 672
Query: 167 LFDKMP-----AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR-DLTSWKQLINGLVNS 220
LF M A ++ + M+ Y G + A +L M + D W L++
Sbjct: 673 LFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVH 732
Query: 221 RRIDAA 226
R ++ A
Sbjct: 733 RNVELA 738
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 7/130 (5%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF-TTVSNAMITMYARCGNIQSALL 391
PD +VL C L LG Q+H +A+ + T + ++ MY + A+
Sbjct: 38 PDR-RLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA 96
Query: 392 EFSSVP---IHDIISWNSIICGLAYHGYAEKALELFERM--RLTDFKPDDITFVGVLSAC 446
FSS+P + WN +I GL G AL + +M + PD TF V+ +C
Sbjct: 97 VFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSC 156
Query: 447 SYAGLVDQGR 456
+ G + GR
Sbjct: 157 AALGAIALGR 166
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 270/470 (57%), Gaps = 13/470 (2%)
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL 213
G ++EG++V L D+ N ++ Y G + A LF +M RD+ SW +
Sbjct: 88 GKLKEGKLVHFHVLNSNFK-HDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSM 146
Query: 214 INGLVNSRRIDAAISYFKQM----PETCEKTWNSIISV---LIRNGLVKEAHSYLEKYP- 265
I G + R A+ F +M E E T +S++ + ++ H+ KY
Sbjct: 147 ITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGC 206
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
+SN+ ++++ Y G +G A+ VF+ + ++ WN +I G GEE L FV+
Sbjct: 207 HSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVR 266
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ G P T++++L+ CS + L+ G+ +HA +K ++ V N ++ MYA+ G+
Sbjct: 267 MQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGS 326
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
I+ A F + D++S NS++ G A HG ++A + F+ M +P+DITF+ VL+A
Sbjct: 327 IRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTA 386
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
CS+A L+D+G++YF M+ KY ++P+ +HY +VDLLGR GL+D+A + + E+ IE
Sbjct: 387 CSHARLLDEGKHYFGLMR-KYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEM---PIEP 442
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
+ +WGALLGA ++H N ++G A +RV EL+P+ G + +L +Y S GR ED ++
Sbjct: 443 TVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRK 502
Query: 566 QMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
MK++GVKKEP CSW+++ + HVF++ D +HP+ ++ + L+ +I+
Sbjct: 503 IMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIK 552
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 179/419 (42%), Gaps = 46/419 (10%)
Query: 18 QRDTVTWNVMIR-----GYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAK 72
+ D +N +++ G K G L + L N + D+ N+++ + +++GA+
Sbjct: 71 EPDRTLYNTLLKRCTQLGKLKEGKLVHFHVL-NSNFKHDLVIQNSLLFMYARCGSLEGAR 129
Query: 73 EVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDL 132
+FD M RD+V+W SMI+GY N +AL +F M + +LV C
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189
Query: 133 AESYFKEMGA--------RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
+ + +++ A +V + +V+ R G + EA +FDK+ K+ +WN +IA
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIA 249
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI 244
GY G A LF +M ++ E T++++
Sbjct: 250 GYARKGEGEEALALFVRMQ---------------------------REGYRPTEFTYSAL 282
Query: 245 ISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDV 300
+S G +++ H++L K + N ++ Y + G + A KVF+ + DV
Sbjct: 283 LSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDV 342
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
N M+ G ++ LG+E + F +M G P++ TF SVLT CS LD G+
Sbjct: 343 VSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGL 402
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAE 418
K + ++ + R G + A +PI ++ W +++ H E
Sbjct: 403 MRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTE 461
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 159/355 (44%), Gaps = 64/355 (18%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
R ++ A+ LFD+MP RD V+W MI GY +N +A+ LF +M E + FT ++
Sbjct: 121 RCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSS 180
Query: 58 VI--AGLMQSDN---------------------------------VQGAKEVFDGMEVRD 82
++ G M S N + A VFD + ++
Sbjct: 181 LVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKN 240
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV-NCQRMDLAESYFKEMG 141
V+WN++I+GY G +EAL +F M + AL+ +C M E K +
Sbjct: 241 EVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQ-GKWLH 299
Query: 142 ARDVASWTIMV----NGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
A + S +V N L+ + G I +A K+FDK+ DV + N M+ GY +G
Sbjct: 300 AHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGK 359
Query: 194 VAEDLFQKM-----HDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSI 244
A F +M D+T + ++ ++R +D YF M E + +I
Sbjct: 360 EAAQQFDEMIRFGIEPNDIT-FLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATI 418
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM---GEVG--SAIKVFEL 294
+ +L R GL+ +A S++E+ P + ++G +M E+G +A +VFEL
Sbjct: 419 VDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFEL 473
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 33/267 (12%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD + ++L C+ L L G+ +H + + N+++ MYARCG+++ A
Sbjct: 72 PDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRL 131
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F +P D++SW S+I G A + A AL LF RM +P++ T ++ C Y
Sbjct: 132 FDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASY 191
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI-------------- 498
+ GR C KY + +VD+ R G + EAM + +++
Sbjct: 192 NCGRQIHACCW-KYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAG 250
Query: 499 ---RADGIEV------------SPT--VWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
+ +G E PT + ALL +C ++ G+ +M+
Sbjct: 251 YARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLV 310
Query: 542 G-VYLILTEMYLSCGRREDAKRIFAQM 567
G V L MY G DA+++F ++
Sbjct: 311 GYVGNTLLHMYAKSGSIRDAEKVFDKL 337
>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 185/649 (28%), Positives = 317/649 (48%), Gaps = 88/649 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER---------- 50
M++ R+ +A +LFD+MP+++ V W I G +NG + A +F M E
Sbjct: 53 MKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACN 112
Query: 51 -------------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D + + +I + ++ A+EVF ME
Sbjct: 113 AALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRME 172
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRM---DLAES 135
DVV + S++S NG + A+ V M + + + + + L C RM +
Sbjct: 173 APDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRMIGEQIHGY 232
Query: 136 YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
K MG++ V + T +++ R G A +F+ + +K+V +W M+ + +G + A
Sbjct: 233 MLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDA 292
Query: 196 EDLFQKMHDRDLTSWK---QLINGLVNS----RRIDAAISYFKQMPETCEKTWNSIISVL 248
+F +M + + + G S R+I + M + + N+++S+
Sbjct: 293 LRVFSEMISEAVEPNEFAFSIALGACGSVCLGRQIHCSAIKCNLMTDI--RVSNALLSMY 350
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
R+G V E + L K ++ SWT I F+
Sbjct: 351 GRSGFVSEVEAVLGKIENPDLVSWTAAISANFQ--------------------------- 383
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
N E+ + +QM G +P++ F+S L+ C+DL LD GRQ+H A+K+ +
Sbjct: 384 ----NGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDF 439
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
NA+I MY++CG I SA L F + +HD++SWNS+I GLA HG A LE F M
Sbjct: 440 KVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMC 499
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
+ ++PDD TF+ VL C++AGLV +G +F M ++Y L P +HY C++D+LGR G
Sbjct: 500 SSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRF 559
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
DEA++++ + E +W LL +C++H N+ +G++A +++MEL +S Y++++
Sbjct: 560 DEALHMIKNM---PFEPDVLIWKTLLASCKLHKNLDIGKLATDKLMELSERDSASYVLMS 616
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
+Y +DA+R+ +M E GVKK+ G SWI++ + F++ D+SH
Sbjct: 617 NLYAMHEEWQDAERVRRRMDEIGVKKDAGWSWIEVKNEVSTFVARDTSH 665
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 168/416 (40%), Gaps = 80/416 (19%)
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT--- 208
++ L++ GR+ +A LFD+MP K+V AW I+G NG A +F M + +
Sbjct: 49 LDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAAND 108
Query: 209 ------------------SWKQLINGL-----------VNSRRID---------AAISYF 230
S + ++ L + S I+ AA F
Sbjct: 109 FACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVF 168
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEA--------------------------------- 257
++M + S++S L RNG + A
Sbjct: 169 RRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRMIGEQ 228
Query: 258 -HSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
H Y+ K S ++ + T +I Y G+ A VFE + +++V W M+ +
Sbjct: 229 IHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGR 288
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
E+ L+ F +M P+ F+ L C ++ LGRQIH AIK VSNA
Sbjct: 289 LEDALRVFSEMISEAVEPNEFAFSIALGACG---SVCLGRQIHCSAIKCNLMTDIRVSNA 345
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
+++MY R G + + D++SW + I +G++EKA+ L +M F P+
Sbjct: 346 LLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPN 405
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
D F LS+C+ L+DQGR C+ K + ++++ + G I A
Sbjct: 406 DYAFSSGLSSCADLALLDQGR-QLHCLALKLGCDFKVCTGNALINMYSKCGQIGSA 460
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 197/660 (29%), Positives = 327/660 (49%), Gaps = 76/660 (11%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM 78
+D + ++ G+ + G +D+A +F QM +R+ T N ++ GL + + A ++F
Sbjct: 283 KDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFK-- 340
Query: 79 EVRDVVTWNS-----MISGYVCNGLIDEALRV---FHGMPLKDVVS--WNLVIGALVN-- 126
E++D+V N+ ++S + + E R H +++ + W L+ ALVN
Sbjct: 341 EMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLY 400
Query: 127 --CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM------PAK---- 174
C +D A S F+ M ++D SW +++GL R EA F M P+K
Sbjct: 401 AKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVI 460
Query: 175 -----------------------------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
DV N ++ Y + C+ + +F M +
Sbjct: 461 STLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEY 520
Query: 206 DLTSWKQLINGLVNSR-RIDAAISYFKQMPETCEKTWNSIISVLIRNGLV--------KE 256
D SW I L S + AI YF +M + K N + + I + + ++
Sbjct: 521 DQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKP-NRVTFINILSAVSSLSLLELGRQ 579
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV-FELMTTR-DVTVWNVMIFGLGEND 314
H+ + K+ ++ + N ++ ++ E ++ F M+ R D WN MI G N
Sbjct: 580 IHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNG 639
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
+ + + M + G D+ T +VL+ C+ + TL+ G ++HA AI+ V +
Sbjct: 640 ILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGS 699
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
A++ MYA+CG I A F +P+ +I SWNS+I G A HG+ KAL+LF +M+ P
Sbjct: 700 ALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLP 759
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
D +TFVGVLSACS+ GLVD+G +F M Y L PR H++C+VDLLGR G + L
Sbjct: 760 DHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAG---DVKKL 816
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHN--NIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
I+ + + +W +LGAC N N ++G A + ++ELEP N+ Y++L+ M+
Sbjct: 817 EEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHA 876
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK----FHRLRYLLN 608
+ G+ ED + M+ VKKE GCSW+ + DG HVF++GD +HP+ + +L+ ++N
Sbjct: 877 AGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMN 936
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 231/485 (47%), Gaps = 48/485 (9%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + AQ LFD+MPQ++ V+W+ ++ GY +NG D A LF + + + I
Sbjct: 85 VRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIG 144
Query: 61 GLMQSDNVQGAKEVFDGMEVR----------DVVTWNSMISGYV-CNGLIDEALRVFHGM 109
+++ G + GME+ D+V N ++S Y C+ ID+A RVF +
Sbjct: 145 SALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEI 204
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA--RDVASWTIMVNGLVREGRIVEARKL 167
+K SWN +I V C+R D A S FK + R+ N + A L
Sbjct: 205 KMKTSASWNSIIS--VYCRRGD-AISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSL 261
Query: 168 FD-------KMPA--------KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
D +M A KD+ + +++G+ G + A+ +F++M DR+ +
Sbjct: 262 VDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNG 321
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL--------IRNGLVK--EAHSYLE 262
L+ GL + + A FK+M + E +S +L ++ G K E H+YL
Sbjct: 322 LMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLI 381
Query: 263 KYPYSNIASWT---NVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
+ ++ W N +V Y + + +A +F+LM ++D WN +I GL N+ EE
Sbjct: 382 RNALVDV--WILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEE 439
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
+ F M+ +G P + S L+ C+ L + LG+QIH + IK + +VSNA++T
Sbjct: 440 AVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLT 499
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY-HGYAEKALELFERMRLTDFKPDDI 437
+YA ++ F +P +D +SWNS I LA +A++ F M +KP+ +
Sbjct: 500 LYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRV 559
Query: 438 TFVGV 442
TF+ +
Sbjct: 560 TFINI 564
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 184/417 (44%), Gaps = 66/417 (15%)
Query: 103 LRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIV 162
L+++ DV N ++ V + A+ F EM +++ SW+ +V+G + G
Sbjct: 63 LQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPD 122
Query: 163 EARKLF----------------------------------------DKMP-AKDVQAWNL 181
EA LF K P A D+ N+
Sbjct: 123 EACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNV 182
Query: 182 MIAGYLD-NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA--AISYFKQMPETC- 237
+++ Y + + A +F+++ + SW +I+ V RR DA A F M
Sbjct: 183 LMSMYSHCSASIDDARRVFEEIKMKTSASWNSIIS--VYCRRGDAISAFKLFSSMQREAT 240
Query: 238 -------EKTWNSIISV---LIRNG--LVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGE 284
E T+ S+++V L+ G L+++ + +EK + ++ + ++ G+ G
Sbjct: 241 ELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGL 300
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+ SA +FE M R+ N ++ GL GEE K F +MK+ + +++ +L+
Sbjct: 301 IDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDL-VEINASSYAVLLSA 359
Query: 345 CSDLPTLDLGR----QIHAQAIKIAR-NQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
++ L G+ ++HA I+ A + + + NA++ +YA+C I +A F +P
Sbjct: 360 FTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSK 419
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
D +SWNSII GL ++ E+A+ F MR P + + LS+C+ G + G+
Sbjct: 420 DTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQ 476
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 148/346 (42%), Gaps = 55/346 (15%)
Query: 272 WTNVIVGYF-EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
W N +V F G + SA K+F+ M +++ W+ ++ G +N + +E F + +G
Sbjct: 76 WCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAG 135
Query: 331 PSPDNATFTSVLTICSDLPT--LDLGRQIHAQAIKIARNQFTTVSNAMITMYARC-GNIQ 387
P++ S L C +L L LG +IH K +SN +++MY+ C +I
Sbjct: 136 LLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASID 195
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT----DFKPDDITFVGVL 443
A F + + SWNSII G A A +LF M+ + +P++ TF ++
Sbjct: 196 DARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLV 255
Query: 444 S-ACSYAGLVDQGRYYFDCM----KNKYFLQPRSAHYTCVVDLLGRFGLID--------- 489
+ ACS LVD G + M + F++ + +V R+GLID
Sbjct: 256 TVACS---LVDCGLTLLEQMLARIEKSSFVKDLYVG-SALVSGFARYGLIDSAKMIFEQM 311
Query: 490 ----------------------EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
EA + E++ D +E++ + + LL A +N+K G+
Sbjct: 312 DDRNAVTMNGLMVGLARQHQGEEAAKIFKEMK-DLVEINASSYAVLLSAFTEFSNLKEGK 370
Query: 528 IAGERVMELEPNNSGVYL------ILTEMYLSCGRREDAKRIFAQM 567
G+ V N+ V + L +Y C ++A+ IF M
Sbjct: 371 RKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLM 416
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
D T++ Q+H Q K N ++ ++ R GN+ SA F +P +++SW+
Sbjct: 51 DSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSC 110
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
++ G A +G ++A LF + P+ L AC G
Sbjct: 111 LVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELG 154
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 197/659 (29%), Positives = 322/659 (48%), Gaps = 74/659 (11%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM 78
RD + ++ G+ + G +D A +F QM +R+ T N ++ GL + + A +VF
Sbjct: 384 RDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFK-- 441
Query: 79 EVRDVVTWNS-----MISGYVCNGLIDEALRV---FHGMPLKD-VVSWNLVIG-ALVN-- 126
E++D+V NS ++S + + E R H + +V + IG ALVN
Sbjct: 442 EMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMY 501
Query: 127 --CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
C +D A S F+ M ++D SW M++GL R EA F M + N +
Sbjct: 502 GKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVI 561
Query: 185 GYLDNGCVGVAEDLFQKMH--------DRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
L + L +++H D D++ L+ + I+ F QMPE
Sbjct: 562 STLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEY 621
Query: 237 CEKTWNSIISVLIRN---------------------------------------GLVKEA 257
+ +WNS I L + GL +
Sbjct: 622 DQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQI 681
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV-FELMTTR-DVTVWNVMIFGLGENDL 315
H+ + KY ++ + N ++ ++ E ++ F M+ R D WN MI G + +
Sbjct: 682 HALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGI 741
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
+ + M + G D TF +VL+ C+ + TL+ G ++HA A++ V +A
Sbjct: 742 LHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSA 801
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
++ MYA+CG I A F +P+ +I SWNS+I G A HG+ +KAL++F RM+ PD
Sbjct: 802 LVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPD 861
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
+TFVGVLSACS+ GLVD+G +F M Y L PR H++C+VDLLGR G + + + +
Sbjct: 862 HVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFI 921
Query: 496 NEIRADGIEVSPTVWGALLGACRIHN--NIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
+ D + +W +LGAC N N ++G+ A + ++ELEP N+ Y++L+ M+ +
Sbjct: 922 KTMPMDP---NILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAA 978
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK----FHRLRYLLN 608
G ED M++ VKK+ GCSW+ + DG H+F++GD +HP+ + +L+ L+N
Sbjct: 979 GGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMN 1037
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 167/641 (26%), Positives = 292/641 (45%), Gaps = 78/641 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R + A+ LFD+MPQ++ V+W+ +I GY +N D A LF + + + +
Sbjct: 186 VRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVG 245
Query: 61 GLMQSDNVQGAKEVFDGME----------VRDVVTWNSMISGYV-CNGLIDEALRVFHGM 109
+++ G+ + GM+ V D++ N ++S Y C+G ID+A RVF +
Sbjct: 246 SALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEI 305
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFK----------EMGAR----DVASWTIMVNGL 155
++ V+WN +I V C+R D A S FK E+ R + S L
Sbjct: 306 KFRNSVTWNSIIS--VYCRRGD-AVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSL 362
Query: 156 VREGRIVEARKLFDKMPA---KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
G ++ + L + +D+ + ++ G+ G + A+ +F++M+DR+ +
Sbjct: 363 ADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNG 422
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL--------IRNGLVK--EAHSYLE 262
L+ GL + + A FK+M + E S++ +L ++ G K E H+YL
Sbjct: 423 LMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLF 482
Query: 263 KYPY--SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+ + I+ ++ Y + + +A VF+LM ++D WN MI GL N+ EE +
Sbjct: 483 RSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAV 542
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F MK +G P N + S L+ CS L L LGRQIH + K + +VSNA++T+Y
Sbjct: 543 SCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLY 602
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLA-YHGYAEKALELFERMRLTDFKPDDITF 439
A +I F +P +D +SWNS I LA Y +AL+ F M ++P+ +TF
Sbjct: 603 AETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTF 662
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRF-------------- 485
+ +L+A S ++ G + + KY + +A ++ G+
Sbjct: 663 INILAAVSSFSVLGLG-HQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMS 721
Query: 486 ------------------GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG- 526
G++ +AM+L+ + G ++ + +L AC ++ G
Sbjct: 722 ERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGM 781
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
E+ V ++ V L +MY CG+ + A R F M
Sbjct: 782 EVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELM 822
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 204/433 (47%), Gaps = 32/433 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYN-TVIAGLMQ 64
I A ++F MP +DTV+WN MI G N + A+ F+ M M N +VI+ L
Sbjct: 507 IDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSS 566
Query: 65 SDNV-------QGAKEVFD-GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
++ Q E F G+++ DV N++++ Y I+E +VF MP D VS
Sbjct: 567 CSSLGWLTLGRQIHGEGFKWGLDL-DVSVSNALLTLYAETDSINECQKVFFQMPEYDQVS 625
Query: 117 WNLVIGALVNCQRMDL-AESYFKEM---GARDVASWTIMVNGLVREGRIV----EARKLF 168
WN IGAL + L A YF EM G R I + V ++ + L
Sbjct: 626 WNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALI 685
Query: 169 DKMPAKDVQAW-NLMIAGYLDNGCVGVAEDLFQKMHD-RDLTSWKQLINGLVNSRRIDAA 226
K D A N ++A Y + E +F +M + RD SW +I+G ++S + A
Sbjct: 686 LKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKA 745
Query: 227 ISYFKQMPETCEK----TWNSIISVLIRNGLVK---EAHS-YLEKYPYSNIASWTNVIVG 278
+ M + +K T+ +++S ++ E H+ + S++ + ++
Sbjct: 746 MDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDM 805
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G++ A + FELM R++ WN MI G + G++ LK F +MK+ G SPD+ TF
Sbjct: 806 YAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTF 865
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSV 396
VL+ CS + +D G + H +++ + + M+ + R G+++ ++
Sbjct: 866 VGVLSACSHVGLVDEGYK-HFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTM 924
Query: 397 PIH-DIISWNSII 408
P+ +I+ W +++
Sbjct: 925 PMDPNILIWRTVL 937
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 183/410 (44%), Gaps = 45/410 (10%)
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYL---DNGCVG------VAEDLFQKMHDRDLTSWK 211
IV R L D++P K NL G L N CV +A LF ++ ++ +++
Sbjct: 73 IVAWRLLKDRLPTK----INLQRRGSLRDATNTCVAGCDFPEMASHLFMRLLNKYNSTYT 128
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
L + + ++ S F + KT +S+ H L K +++
Sbjct: 129 FLRHYTFSHSQLQQLDSEFDRY-----KTSSSLYDA-------NHLHLQLYKTGFTDDVF 176
Query: 272 WTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
+ N ++ Y +G + SA K+F+ M +++ W+ +I G +N + +E F + SG
Sbjct: 177 FCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSG 236
Query: 331 PSPDNATFTSVLTICSDLPT--LDLGRQIHAQAIKIARNQFTTVSNAMITMYARC-GNIQ 387
P++ S L C + + LG QIHA K+ +SN +++MY+ C G+I
Sbjct: 237 LLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSID 296
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT----DFKPDDITFVG-V 442
A F + + ++WNSII G A A +LF M++ + +P++ T V
Sbjct: 297 DAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLV 356
Query: 443 LSACSYAGLVDQGRYYFDCMKNKY----FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
+ACS L D G + M + FL+ + +V+ R+GL+D A + ++
Sbjct: 357 TAACS---LADCGLVLLEQMLTRIEKSGFLRDLYVG-SALVNGFARYGLMDCAKMIFKQM 412
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
+ T+ G ++G R H + ++ E +E N+ + ++L+
Sbjct: 413 YDRN---AVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLS 459
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 134/297 (45%), Gaps = 38/297 (12%)
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
DV ++N VR G +V ARKLFD+MP K++ +W+ +I+GY N +M
Sbjct: 174 DVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQN-----------RMP 222
Query: 204 DRDLTSWKQLING--LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
D + +K +I+ L N + +A+ +Q T K L + H+++
Sbjct: 223 DEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIK-------------LGMQIHAFI 269
Query: 262 EKYPYSNIASWTNVIVGYFE--MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
K P + +NV++ + G + A +VF+ + R+ WN +I
Sbjct: 270 CKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSA 329
Query: 320 LKFFVQMKESGPS----PDNATFTSVLTICSDLPTLDLGRQIHAQAI-KIARNQFTT--- 371
K F M+ G P+ T S++T L D G + Q + +I ++ F
Sbjct: 330 FKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLA--DCGLVLLEQMLTRIEKSGFLRDLY 387
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
V +A++ +AR G + A + F + + ++ N ++ GLA E+A ++F+ M+
Sbjct: 388 VGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMK 444
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 22/193 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ +I A F+ MP R+ +WN MI GY ++G A+ +F +M + D T+
Sbjct: 808 KCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVG 867
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
V++ V + F M +V + I + C G + + MP
Sbjct: 868 VLSACSHVGLVDEGYKHFKSMG--EVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMP 925
Query: 111 L-KDVVSWNLVIGAL--VNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGR---I 161
+ +++ W V+GA N + +L + K E+ ++ ++ ++ N G +
Sbjct: 926 MDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDV 985
Query: 162 VEARKLFDKMPAK 174
VEAR K K
Sbjct: 986 VEARLAMRKAAVK 998
>gi|144923518|gb|ABP02616.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 501
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 246/441 (55%), Gaps = 3/441 (0%)
Query: 3 NARIQEAQNL-FDKMPQRDT--VTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVI 59
N R + N F RDT V I + +NG A+ +F+ MP +++F++N ++
Sbjct: 6 NLRGKHLHNFCFPVQKARDTYIVKCTNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLML 65
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
G +++ + A+ +FD M +D V+WN M+SGYV +G +DEA VF MP KD +SWN
Sbjct: 66 TGYVKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNG 125
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++ V R++ A F+ ++ SW ++ G V+ + +AR+LFD MP ++ +W
Sbjct: 126 LLAVYVQNGRLEEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISW 185
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N MI+GY +G + A LF++ RD+ +W ++ V S +D A F +MP E
Sbjct: 186 NTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREM 245
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+N +I+ ++ + A E P N+ SW +I GY + G++ A ++F++MT RD
Sbjct: 246 AYNVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRD 305
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
W +I G + E+ + V+MK G S + +TF L+ C+ + L LG+Q+H
Sbjct: 306 CVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHG 365
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
QA+K + V NA++ MY +CG+I A F + + DIISWN+++ G A HG+ +
Sbjct: 366 QAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQ 425
Query: 420 ALELFERMRLTDFKPDDITFV 440
AL +F+ M+ FKPD+IT +
Sbjct: 426 ALLVFDSMKTAGFKPDEITML 446
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 191/379 (50%), Gaps = 45/379 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N R+ +A+NLFD MPQ+D V+WNVM+ GY ++G +D A +F+ MP +D ++N ++A
Sbjct: 69 VKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLA 128
Query: 61 GLMQSDNVQ-------------------------------GAKEVFDGMEVRDVVTWNSM 89
+Q+ ++ A+ +FD M VR+ ++WN+M
Sbjct: 129 VYVQNGRLEEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTM 188
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
ISGY +G + +A R+F P++DV +W ++ A V +D A F EM + ++
Sbjct: 189 ISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYN 248
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+M+ G V+ ++ AR+LF+ MP ++V +WN +I+GY NG + A +LF M RD S
Sbjct: 249 VMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVS 308
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPE----------TCEKTWNSIISVLIRNGLVKEAHS 259
W +I G + + + +M C + + ++ L+ L K+ H
Sbjct: 309 WAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALV---LGKQVHG 365
Query: 260 YLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
K Y N N ++ Y + G +G A VFE M +D+ WN M+ G + G +
Sbjct: 366 QAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQ 425
Query: 319 GLKFFVQMKESGPSPDNAT 337
L F MK +G PD T
Sbjct: 426 ALLVFDSMKTAGFKPDEIT 444
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 193/400 (48%), Gaps = 47/400 (11%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC 127
VQ A++ + +V + IS ++ NG ALRVF MP K++ SWNL++ V
Sbjct: 19 VQKARDTY-------IVKCTNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKN 71
Query: 128 QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
+R+ A + F M +D SW +M++G VR G + EA+ +FD MP KD +WN ++A Y+
Sbjct: 72 RRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYV 131
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
NG + A LF+ D +L SW L+ G V + + A F MP +WN++IS
Sbjct: 132 QNGRLEEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISG 191
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
R+G + +A E+ P ++ +WT ++ Y + G + A +VF+ M + +NVMI
Sbjct: 192 YARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYNVMI 251
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
G +VQ K+ +D+ R++ +A+ RN
Sbjct: 252 AG-------------YVQYKK----------------------MDMARELF-EAMP-CRN 274
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
N +I+ Y + G+I A F + D +SW +II G A G+ EK + + +M
Sbjct: 275 --VGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKM 332
Query: 428 RLTDFKPDDITFVGVLSACS-YAGLVDQGRYYFDCMKNKY 466
+ + TF LS C+ A LV + + +K Y
Sbjct: 333 KRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGY 372
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 192/435 (44%), Gaps = 51/435 (11%)
Query: 137 FKEMGARD--VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
F ARD + T ++ +R G A ++FD MP K++ +WNLM+ GY+ N +
Sbjct: 17 FPVQKARDTYIVKCTNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVD 76
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A +LF M +D SW +++G V S +D A F MP +WN +++V ++NG +
Sbjct: 77 ARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRL 136
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+EA E + SW ++ GY + +G A ++F+ M R+ WN MI G +
Sbjct: 137 EEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDG 196
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
+ + F E P D T+T+++ LD R++ + + N
Sbjct: 197 DLLQARRLF----EESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEM----PGKREMAYN 248
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
MI Y + + A F ++P ++ SWN+II G +G +A ELF+ M +
Sbjct: 249 VMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMT----QR 304
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
D +++ ++ AG G Y ++ M++
Sbjct: 305 DCVSWAAII-----AGYAQTGHY-------------------------------EKVMHM 328
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLS 553
L +++ DG ++ + + L C + +G ++ G+ V N V L EMY
Sbjct: 329 LVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCK 388
Query: 554 CGRREDAKRIFAQMK 568
CG +A +F +M+
Sbjct: 389 CGSIGEAYDVFERMQ 403
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 153/481 (31%), Positives = 273/481 (56%), Gaps = 16/481 (3%)
Query: 148 WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL 207
W ++ + G +V+ARK+FD+MP +D+ +WN+M+ GY + G + A LF +M ++D
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDS 182
Query: 208 TSWKQLINGLVNSRRIDAAI---SYFKQMPETCEKTWNSIISV-------LIRNGLVKEA 257
SW ++ G V + + A+ S +++P + + I+V IR G KE
Sbjct: 183 YSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRG--KEI 240
Query: 258 HSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
H ++ + S+ W++++ Y + G + A +F+ + +DV W MI ++
Sbjct: 241 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW 300
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
EG F ++ S P+ TF VL C+DL T +LG+Q+H ++ + ++ S+++
Sbjct: 301 REGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSL 360
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+ MY +CGNI+SA P D++SW S+I G A +G ++AL+ F+ + + KPD
Sbjct: 361 VDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
+TFV VLSAC++AGLV++G +F + K+ L S HYTC+VDLL R G ++ ++++
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVIS 480
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
E+ ++ S +W ++LG C + NI + E A + + ++EP N Y+ + +Y + G+
Sbjct: 481 EM---PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGK 537
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
E+ ++ +M+E GV K PG SW +I HVF++ D+SHP ++++ L L +++
Sbjct: 538 WEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKE 597
Query: 617 E 617
E
Sbjct: 598 E 598
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 209/477 (43%), Gaps = 71/477 (14%)
Query: 36 FLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME----VRDVVTWNSMIS 91
L A+ L + + TY +I Q+ ++ K+V + + V +V WN ++
Sbjct: 69 LLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLR 128
Query: 92 GYV-CNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTI 150
Y C L+D A +VF MP +D+ SWN+++ ++ A F EM +D SWT
Sbjct: 129 MYAKCGSLVD-ARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTA 187
Query: 151 MVNGLVREGRIVEARKLFDKMP---------------------------AKDVQA----- 178
MV G V++ + EA L+ M K++
Sbjct: 188 MVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRA 247
Query: 179 --------WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
W+ ++ Y GC+ A ++F K+ ++D+ SW +I+ S R S F
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 231 KQMPETCEK----TWNSIISV---LIRNGLVKEAHSYLEKY---PYSNIASWTNVIVGYF 280
++ +CE+ T+ +++ L L K+ H Y+ + PYS +S +++ Y
Sbjct: 308 SELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASS--SLVDMYT 365
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G + SA V + D+ W +I G +N +E LK+F + +SG PD+ TF +
Sbjct: 366 KCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVN 425
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIH 399
VL+ C+ ++ G + + R T+ ++ + AR G + S +P+
Sbjct: 426 VLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMK 485
Query: 400 -DIISWNSIICGLAYHG----YAEKALELFERMRLTDFKPDD-ITFVGVLSACSYAG 450
W S++ G + +G E A ELF+ +P++ +T+V + + + AG
Sbjct: 486 PSKFLWASVLGGCSTYGNIDLAEEAAQELFK------IEPENPVTYVTMANIYAAAG 536
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 155/361 (42%), Gaps = 40/361 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVIA 60
++EA+ LFD+M ++D+ +W M+ GY K + A+ L++ M ++FT + +A
Sbjct: 167 LEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVA 226
Query: 61 GLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
++ KE+ G VR D V W+S++ Y G IDEA +F + KDVV
Sbjct: 227 AAAAVKCIRRGKEIH-GHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV 285
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
SW +I R S F E+ G++ + +L ++
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 176 VQ--------AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
+ A + ++ Y G + A+ + DL SW LI G + + D A+
Sbjct: 346 TRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEAL 405
Query: 228 SYFKQMPETCEK----TWNSIISVLIRNGLVKEA----HSYLEKYPYSNIASWTNVIV-- 277
YF + ++ K T+ +++S GLV++ +S EK+ S+ + +V
Sbjct: 406 KYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDL 465
Query: 278 ----GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL---GENDLGEEGLKFFVQMKESG 330
G FE ++ S I + ++ +W ++ G G DL EE + +++
Sbjct: 466 LARSGRFE--QLKSVISEMPMKPSK--FLWASVLGGCSTYGNIDLAEEAAQELFKIEPEN 521
Query: 331 P 331
P
Sbjct: 522 P 522
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
G++ L+ VQ+ P +T+ +++ +CS L+ G+++H + N
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
++ MYA+CG++ A F +P D+ SWN ++ G A G E+A +LF+ M D
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKD 181
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
I+ A+++ D P+ D V+W +I G +NG D A+ F+ + + D T+ V++
Sbjct: 370 IESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSA 429
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLK-D 113
+ V+ E F + + ++ S Y C +G ++ V MP+K
Sbjct: 430 CTHAGLVEKGLEFFYSITEKHRLSHTS--DHYTCLVDLLARSGRFEQLKSVISEMPMKPS 487
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM---GARDVASWTIMVNGLVREGRIVEARKLFDK 170
W V+G +DLAE +E+ + ++ M N G+ E K+ +
Sbjct: 488 KFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKR 547
Query: 171 M 171
M
Sbjct: 548 M 548
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 164/462 (35%), Positives = 270/462 (58%), Gaps = 33/462 (7%)
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+++N V+ + +A +LFD+MP ++V +W MI+ Y + C K+H + L
Sbjct: 53 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAY--SKC---------KIHQKAL-- 99
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV-LIRNGLVKEAHSYLEKYPYSN 268
+ L+ L + R + + + + C N + V ++ G++KE LE S+
Sbjct: 100 -ELLVLMLRDGVRPN--VYTYSSVLRAC----NGMSDVRMLHCGIIKEG---LE----SD 145
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ + +I + ++GE A+ VF+ M T D VWN +I G +N + L+ F +MK
Sbjct: 146 VYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKR 205
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
+G + AT TSVL C+ L L+LG Q H +K +Q ++NA++ MY +CG+++
Sbjct: 206 AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLED 263
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F+ + D+I+W+++I GLA +GY+++AL+LFE M+ + KP+ IT VGVL ACS+
Sbjct: 264 ARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSH 323
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
AGL++ G YYF MK Y + P HY C++DLLG+ G +D+A+ LLNE+ E
Sbjct: 324 AGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMEC---EPDAV 380
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
W LLGACR+ N+ + E A ++V+ L+P ++G Y +L+ +Y + + + + I +M+
Sbjct: 381 TWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMR 440
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
+ G+KKEPGCSWI++N H F+ GD SHP+ + LN L
Sbjct: 441 DIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQL 482
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 157/368 (42%), Gaps = 40/368 (10%)
Query: 52 MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
MF N +I ++ + + A ++FD M R+V++W +MIS Y + +AL + M L
Sbjct: 48 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM-L 106
Query: 112 KDVVSWNLVI--GALVNCQRMD----LAESYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
+D V N+ L C M L KE DV + +++ + G +A
Sbjct: 107 RDGVRPNVYTYSSVLRACNGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDAL 166
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
+FD+M D WN +I G+ N VA +LF++M + + + ++ +
Sbjct: 167 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA----- 221
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGE 284
C L+ G+ +AH ++ KY I + N +V Y + G
Sbjct: 222 -----------CTGL------ALLELGM--QAHVHIVKYDQDLILN--NALVDMYCKCGS 260
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+ A +VF M RDV W+ MI GL +N +E LK F MK SG P+ T VL
Sbjct: 261 LEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFA 320
Query: 345 CSDLPTLDLGRQIHAQAIKI-ARNQFTTVSNAMITMYARCGNIQSA---LLEFSSVPIHD 400
CS L+ G K+ N MI + + G + A L E P D
Sbjct: 321 CSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEP--D 378
Query: 401 IISWNSII 408
++W +++
Sbjct: 379 AVTWRTLL 386
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 151/349 (43%), Gaps = 39/349 (11%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF-----DGME 79
NV+I Y K L++A LF+QMP+R++ ++ T+I+ + Q A E+ DG+
Sbjct: 52 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVR 111
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-----DVVSWNLVIGALVNCQRMDLAE 134
+V T++S++ CNG+ D +R+ H +K DV + +I + A
Sbjct: 112 -PNVYTYSSVLRA--CNGMSD--VRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDAL 166
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
S F EM D W ++ G + R A +LF +M A + L C G+
Sbjct: 167 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL-RACTGL 225
Query: 195 A-EDLFQKMH------DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
A +L + H D+DL L++ ++ A F QM E TW+++IS
Sbjct: 226 ALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISG 285
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVG----------SAIKVFELMT 296
L +NG +EA E S IVG F G S K++ +
Sbjct: 286 LAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINP 345
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
R+ + MI LG+ ++ +K +M+ PD T+ ++L C
Sbjct: 346 GRE--HYGCMIDLLGKAGKLDDAVKLLNEME---CEPDAVTWRTLLGAC 389
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 14/256 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
+ +A LFD+MPQR+ ++W MI Y K A+ L M +++TY++V+
Sbjct: 64 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123
Query: 62 LMQSDNVQ--GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+V+ + +G+E DV +++I + G ++AL VF M D + WN
Sbjct: 124 CNGMSDVRMLHCGIIKEGLE-SDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 182
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA------ 173
+IG R D+A FK M + + ++R + +L +
Sbjct: 183 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD 242
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
+D+ N ++ Y G + A +F +M +RD+ +W +I+GL + A+ F+ M
Sbjct: 243 QDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELM 302
Query: 234 PETCEK-TWNSIISVL 248
+ K + +I+ VL
Sbjct: 303 KSSGTKPNYITIVGVL 318
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 50/277 (18%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------------ 48
++A ++FD+M D + WN +I G+ +N D A+ LF +M
Sbjct: 163 EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC 222
Query: 49 -------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
++D+ N ++ + +++ A+ VF+ M+ RDV+TW++M
Sbjct: 223 TGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTM 282
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMDLAES---YFKEMGA--- 142
ISG NG EAL++F M ++ ++G L C L E YF+ M
Sbjct: 283 ISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 342
Query: 143 --RDVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGVAEDLF 199
+ M++ L + G++ +A KL ++M + D W ++ + +AE
Sbjct: 343 INPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 402
Query: 200 QK---MHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
+K + D ++ L N NS++ D+ K+M
Sbjct: 403 KKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRM 439
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++A+ +F++M +RD +TW+ MI G +NG+ A+ LF M I G++ +
Sbjct: 261 LEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFA 320
Query: 66 DNVQGAKEVFDG----MEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLK-D 113
+ G E DG ++ + N Y C G +D+A+++ + M + D
Sbjct: 321 CSHAGLLE--DGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD 378
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGA---RDVASWTIMVN 153
V+W ++GA + M LAE K++ A D ++T++ N
Sbjct: 379 AVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSN 421
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 120/266 (45%), Gaps = 30/266 (11%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM 78
+D + N ++ Y K G L++A +FNQM ERD+ T++T+I+GL Q+ Q A ++F+ M
Sbjct: 243 QDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELM 302
Query: 79 EVRDVVTWNSMISG--YVCN--GLIDEALRVFHGM-------PLKDVVSWNLVIGALVNC 127
+ I G + C+ GL+++ F M P ++ + +I L
Sbjct: 303 KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGRE--HYGCMIDLLGKA 360
Query: 128 QRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPA---KDVQAWNLMI 183
++D A EM D +W ++ + +V A K+ A +D + ++
Sbjct: 361 GKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLS 420
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDL-----TSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
Y ++ E++ ++M D + SW ++ +++I A I + P+ E
Sbjct: 421 NIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEV------NKQIHAFIIGDESHPQIVE 474
Query: 239 --KTWNSIISVLIRNGLVKEAHSYLE 262
K N +I LI G V E + L+
Sbjct: 475 VNKKLNQLIHRLIGIGYVPETNFVLQ 500
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 198/611 (32%), Positives = 310/611 (50%), Gaps = 55/611 (9%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR---DVVTWNSMISGYVCNGLIDEALRV 105
E ++F N +++ + + A++VFD M R D+V+WNS+++ Y+ G A+++
Sbjct: 177 EWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKM 236
Query: 106 FHGMP-----LKDVVSWNLVIGALVNC---QRMDLAESYFKEMGA-RDVASWTIMVNGLV 156
F M D VS V+ A + R Y G DV +V+
Sbjct: 237 FERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYA 296
Query: 157 REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQ 212
+ G + EA K+F++M KDV +WN M+ GY G A LF+K+ + ++ +W
Sbjct: 297 KCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSA 356
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV--------KEAHSYLEKY 264
+I G A+ F+QM C N + V + +G KE H + K+
Sbjct: 357 VIAGYAQRGLGFEALDVFRQM-LLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKW 415
Query: 265 --------PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD--VTVWNVMIFGLGEND 314
P ++ +I Y + +A +F+L+ +D V W V+I G ++
Sbjct: 416 ILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHG 475
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTI------CSDLPTLDLGRQIHAQAIKIARNQ 368
E L+ F QM + PDN + TI C+ L L GRQIHA + RN+
Sbjct: 476 EANEALELFSQMLQ----PDNFVMPNAFTISCALMACARLGALRFGRQIHAYVL---RNR 528
Query: 369 FTT----VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
F + V+N +I MY++ G++ +A + F ++ + +SW S++ G HG E+AL++F
Sbjct: 529 FESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIF 588
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
M+ PD +TFV VL ACS++G+VDQG YF+ M + + P + HY C+VDLL R
Sbjct: 589 YEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSR 648
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G +DEAM L IR ++ +P VW ALL ACR++ N+++GE A +++ELE N G Y
Sbjct: 649 AGRLDEAMEL---IRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSY 705
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
+L+ +Y + +D RI MK G+KK PGCSW+Q G F +GD SHP ++
Sbjct: 706 TLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIY 765
Query: 605 YLLNLLHTEIE 615
LL L I+
Sbjct: 766 DLLRDLMQRIK 776
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 118/280 (42%), Gaps = 36/280 (12%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTV--WNVMIFGLGENDLGEEGLKFFVQMKESG 330
T++I Y A+ V + TV WN +I E+ L+ + +M+ G
Sbjct: 81 THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 140
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG---NIQ 387
PD+ TF VL C ++P+ G +HA V N +++MY RCG N +
Sbjct: 141 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 200
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSAC 446
E + D++SWNSI+ G + +A+++FERM +PD ++ V VL AC
Sbjct: 201 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 260
Query: 447 SYAGLVDQGR-----------------------YYFDC----MKNKYFLQPR---SAHYT 476
+ G +G+ Y C NK F + + +
Sbjct: 261 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWN 320
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
+V + G D+A+ L +IR + IE++ W A++
Sbjct: 321 AMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAG 360
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 188/473 (39%), Gaps = 105/473 (22%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
++EA +F++M +D V+WN M+ GY + G D+A+ LF ++ E ++ T++ VIAG
Sbjct: 301 MEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAG 360
Query: 62 LMQSDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNGL-----------IDEALRVF 106
Q A +VF M + +VVT S++SG G I L +
Sbjct: 361 YAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLD 420
Query: 107 HGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD--VASWTIMVNGLVREGRIVEA 164
P D++ N +I C+ A + F + +D V +WT+++ G + G EA
Sbjct: 421 ENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEA 480
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
+LF +M D N ++ C +A + + + I+ V R +
Sbjct: 481 LELFSQMLQPD----NFVMPNAFTISCALMACARLGALR------FGRQIHAYVLRNRFE 530
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE 284
+A+ + N +I + ++G V A + N SWT+++ GY
Sbjct: 531 SAMLFVA----------NCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGY----- 575
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
G + GEE L+ F +M++ PD TF VL
Sbjct: 576 --------------------------GMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYA 609
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
CS H+ + N F ++ +F VP + +
Sbjct: 610 CS-----------HSGMVDQGINYFNGMNK-----------------DFGVVPGAE--HY 639
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
++ L+ G ++A+EL M + KP +V +LSAC V+ G Y
Sbjct: 640 ACMVDLLSRAGRLDEAMELIRGMPM---KPTPAVWVALLSACRVYANVELGEY 689
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 181/560 (32%), Positives = 283/560 (50%), Gaps = 36/560 (6%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-LVIGALVN 126
+ A+ VFD M R+ V+W +M+SGY +EA +F M + + N V A+++
Sbjct: 174 ISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLS 233
Query: 127 CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
+ L + ++GLV + +V V N ++ Y
Sbjct: 234 AVSVPLGLLI------------GVQLHGLVLKDGLV-----------GFVSVENSLVTMY 270
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET----CEKTWN 242
C+ A +F +R+ +W +I G + D A + F QM E T+
Sbjct: 271 AKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFV 330
Query: 243 SIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVF-ELMTT 297
I++ G + K+AH + K + + +V Y + G G A F +L
Sbjct: 331 GILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDV 390
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
DV +W MI G +N EE L + +M + G P T TSVL C+ L L+ G+Q+
Sbjct: 391 DDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQL 450
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
HAQ +K +V A+ TMY++CGN++ +++ F +P DIISWNSII G + HG
Sbjct: 451 HAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRG 510
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
AL+LFE M+L PD ITF+ VL ACS+ GLVD+G +YF M Y L P+ HY C
Sbjct: 511 RDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYAC 570
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
+VD+L R G + EA + + I I+ +W +LGACR + VG AGE++MEL
Sbjct: 571 IVDILSRAGQLKEAKDFIESIT---IDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELG 627
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
+S Y++L+ +Y + + D +R+ M+ GV K+PGCSW+++N+ +VF+ G+ H
Sbjct: 628 TEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNNQVNVFVVGEQQH 687
Query: 598 PKFHRLRYLLNLLHTEIERE 617
P+ ++ L L ++ E
Sbjct: 688 PEAEKINVELIRLAKHMKDE 707
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 184/428 (42%), Gaps = 52/428 (12%)
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE---KTWNSIISVLIRNGLVKE----- 256
RD+ SW L+N L + + AA+S+F+ M + + T +S +V V
Sbjct: 82 RDVASWNSLLNPLSRHQPL-AALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGA 140
Query: 257 -AHSYLEKYPYS----NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
AH++ K P S N+ T ++ Y ++G + A +VF+ M R+ W M+ G
Sbjct: 141 VAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYA 200
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNA-TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
EE + F M + P N T+VL+ S L +G Q+H +K F
Sbjct: 201 TGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFV 260
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
+V N+++TMYA+ + +A+ F S + I+W+++I G A +G A+ A +F +M
Sbjct: 261 SVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSA 320
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN---------KYFLQPRSAHYTCVVDL 481
F P + TFVG+L+A S G + G+ M K L A C D
Sbjct: 321 GFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDA 380
Query: 482 LGRF----------------------GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
F G +EA+ L + + +G+ S ++L AC
Sbjct: 381 KDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACAC 440
Query: 520 HNNIKVGEIAGERVMELEPNNSG-VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
++ G+ ++++ G V L+ MY CG ED+ +F +M + +
Sbjct: 441 LAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDI-----I 495
Query: 579 SWIQINDG 586
SW I G
Sbjct: 496 SWNSIISG 503
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 174/377 (46%), Gaps = 30/377 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----P-ERDMFTYNTVIA 60
I +A+ +FD+MP R+ V+W M+ GY + A LF M P E++ F V++
Sbjct: 174 ISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLS 233
Query: 61 ------GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
GL+ + G + DG+ V V NS+++ Y +D A+ VF ++
Sbjct: 234 AVSVPLGLLIGVQLHGLV-LKDGL-VGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNS 291
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE----GRIV---EARKL 167
++W+ +I D A + F +M + + G++ G +V +A L
Sbjct: 292 ITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGL 351
Query: 168 FDKMP-AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD-RDLTSWKQLINGLVNSRRIDA 225
K+ + V + ++ Y GC G A+D F +++D D+ W +I G V + +
Sbjct: 352 MVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEE 411
Query: 226 AISYFKQM-PETCEKTWNSIISVLIRNGLV------KEAHSYLEKYPYSNIAS-WTNVIV 277
A+ + +M E ++ ++ SVL + K+ H+ + K + S T +
Sbjct: 412 ALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALST 471
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + G + ++ VF M RD+ WN +I G ++ G + L F +MK G +PD+ T
Sbjct: 472 MYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHIT 531
Query: 338 FTSVLTICSDLPTLDLG 354
F +VL CS + +D G
Sbjct: 532 FINVLCACSHMGLVDRG 548
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 48/200 (24%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQM-PERDMFTYNTVIAGL---------------- 62
D V W MI G+ +NG + A+ L+++M E M +Y TV + L
Sbjct: 392 DVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLH 451
Query: 63 ----------------------MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLID 100
+ N++ + VF M RD+++WNS+ISG+ +G
Sbjct: 452 AQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGR 511
Query: 101 EALRVFHGMPLKDVVSWNLV-IGALVNCQRMDLAES---YFKEMGA-----RDVASWTIM 151
+AL +F M L+ + ++ I L C M L + YF+ M + + +
Sbjct: 512 DALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACI 571
Query: 152 VNGLVREGRIVEARKLFDKM 171
V+ L R G++ EA+ + +
Sbjct: 572 VDILSRAGQLKEAKDFIESI 591
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 20/186 (10%)
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN--IQSALLEFSSVP--IHDI 401
S + T G +H A+K T VSN++IT Y + +A F+ +P + D+
Sbjct: 25 SSVRTRRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDV 84
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTD-FKPDDITFVGVLSACSYAGLVDQG--RYY 458
SWNS++ L+ H M TD P +F V +A + G +
Sbjct: 85 ASWNSLLNPLSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHA 144
Query: 459 FDCM------KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI-RADGIEVSPTVWG 511
F C N F+ T ++++ + G I +A + +++ + + + V G
Sbjct: 145 FACKLPSSSGSNNVFVS------TALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSG 198
Query: 512 ALLGAC 517
G C
Sbjct: 199 YATGKC 204
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 267/470 (56%), Gaps = 19/470 (4%)
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ARKLFD+M +DV +W ++ GY G A +F +M W + LV +
Sbjct: 184 DARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAG-GGWPNEVT-LVAAAS 241
Query: 223 IDAAISYFK--QMPETCE---------KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
I +M C N+++ + + G V A + P ++ S
Sbjct: 242 AAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYS 301
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
WT+++ Y + G++ +A K+F+ + R+ W+ M+ + +L EE ++ F M +G
Sbjct: 302 WTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGV 361
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT-VSNAMITMYARCGNIQSAL 390
P +AT SVL+ C+ L LD+GR ++ I + + T +SNA I M+A+CG++ +A
Sbjct: 362 EPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAAS 421
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F ++ +++SWN++I A HG +E+AL LF++ + PD+IT++GVLSACS++G
Sbjct: 422 RLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSG 481
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
LV +GRY+F MK Y ++PR+ HY C++DLLG+ GL++EA + + E W
Sbjct: 482 LVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAG---W 538
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
GALL ACR+H N+++G+ A ++++ L+P++SG+Y++++++Y S + K I M++
Sbjct: 539 GALLNACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIRTVMRDR 598
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN--LLHTEIEREI 618
GVKK PGCS I+++ H FL+ D SH + L LH+++E I
Sbjct: 599 GVKKNPGCSSIEVDGKFHEFLAADVSHAHSEDIYAALENIYLHSKLEGYI 648
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 179/411 (43%), Gaps = 39/411 (9%)
Query: 32 FKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMIS 91
FK GF+ + + N ++ S ++ A+++FD M RDVV+W +++
Sbjct: 157 FKRGFIG-----------QSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVD 205
Query: 92 GYVCNGLIDEALRVFHGMPLKDVVSW----NLVIGA-------LVNCQRMDLAESYFKEM 140
GY GL DEA RVF M + W LV A L+ RM E
Sbjct: 206 GYARGGLPDEAWRVFCRMVVAG-GGWPNEVTLVAAASAAGQIGLLGLGRM--VHQCVVES 262
Query: 141 GAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
G R V +V+ + G + A+++FD MP KDV +W M++ Y G + A LF
Sbjct: 263 GVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLF 322
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM----PETCEKTWNSIISVLIRNGLVK 255
+++ +R+ SW ++ + + A+ F M E + T S++S + G +
Sbjct: 323 KEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLD 382
Query: 256 EAHSYLEKYPYSNIASWT----NVIVGYF-EMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
+ Y S+ T N + F + G+VG+A ++F M ++V WN MI
Sbjct: 383 VGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAH 442
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+ EE L F + K G PD T+ VL+ CS + GR H + +KI
Sbjct: 443 ALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEGRY-HFKEMKIVYGIEP 501
Query: 371 TVSN--AMITMYARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYHGYAE 418
+ MI + + G ++ A S+P+ D W +++ HG E
Sbjct: 502 RAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGALLNACRMHGNVE 552
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 16/240 (6%)
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIAR-NQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
T V + + + IH A K Q V NA++ MYA ++ A F +
Sbjct: 134 TIVFAVKAATTSSSPAEAIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMA 193
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK-PDDITFVGVLSACSYAGLVDQGR 456
D++SW +++ G A G ++A +F RM + P+++T V SA GL+ GR
Sbjct: 194 DRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGR 253
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV-WGALLG 515
C+ + +VD+ G+ G + A + DG+ + W +++
Sbjct: 254 MVHQCVVESGVRMSVNLE-NALVDMFGKCGCVASAKEIF-----DGMPIKDVYSWTSMVS 307
Query: 516 ACRIHNNIKVGEI--AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
A K G++ AG+ E+ N+ + + Y E+A RIF M GV+
Sbjct: 308 A-----YAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVE 362
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 18/137 (13%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMF----TYNTVIAG 61
+ A LF M ++ V+WN MI + +G + A+ LF + +F TY V++
Sbjct: 417 VGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSA 476
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN-------GLIDEALRVFHGMPL-KD 113
S V + F M++ V Y C GL++EA V MP+ D
Sbjct: 477 CSHSGLVSEGRYHFKEMKI--VYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGAD 534
Query: 114 VVSWNLVIGALVNCQRM 130
W GAL+N RM
Sbjct: 535 EAGW----GALLNACRM 547
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 191/629 (30%), Positives = 311/629 (49%), Gaps = 61/629 (9%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D N ++ Y GFL++A LF++MPERD+ ++NT+I L + + A+ + M
Sbjct: 193 DVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMI 252
Query: 80 VRDVVTWN--SMISGYVCNGLID--EALRVFHGMPLK-----DVVSWNLVIGALVNCQRM 130
+R V+ N S+IS + ++ E R H +K V + N ++ A C +
Sbjct: 253 LRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSV 312
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM------------------- 171
F E ++ SW ++NGL +GR +A F M
Sbjct: 313 KALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVL 372
Query: 172 -------PAKDVQAW-------------NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
K++ + N +I Y +G A +F + R++ SW
Sbjct: 373 VELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWN 432
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCE----KTWNSIISVLIRNGLV---KEAHSYLEKY 264
+I +R AI + QM ET E T+ +++ R G + KE H+ +
Sbjct: 433 AMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRI 492
Query: 265 PYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
++ +N ++ Y + G + SA VF + +D +N++I G E D + L F
Sbjct: 493 GLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLF 551
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
+M+ G PD +F V++ C++L L G+++H A++ VSN+++ Y +C
Sbjct: 552 SEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKC 611
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G I A F+ + D+ SWN++I G G E A+ +FE MR + D ++++ VL
Sbjct: 612 GRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVL 671
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
SACS+ GLV++G YF M + L+P HYTC+VDLLGR G ++EA L+ ++ I
Sbjct: 672 SACSHGGLVERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQL---PI 727
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI 563
+WGALLGACRI+ N+++G A E + EL+P + G Y++L+ +Y GR ++A +I
Sbjct: 728 APDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKI 787
Query: 564 FAQMKENGVKKEPGCSWIQINDGGHVFLS 592
MK G KK PGCSW+QI D H F++
Sbjct: 788 RELMKSRGAKKNPGCSWVQIYDQVHAFVA 816
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 118/273 (43%), Gaps = 15/273 (5%)
Query: 255 KEAHSY--LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE--LMTTRDVTVWNVMIFGL 310
K+ H+ L + +++ ++I+ Y + GS +F R +WN +I
Sbjct: 74 KQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNCRTAFLWNTLIRAH 133
Query: 311 GENDLGE-EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
G +G + + +M G D+ TF VL +CSD + G ++H K+ +
Sbjct: 134 SIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTD 193
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG-YAEKALELFERMR 428
V N ++ +Y CG + A F +P D++SWN+II L+ +G Y E F +
Sbjct: 194 VYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMIL 253
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
+ KP+ ++ + +L A L D+ C K L + +VD G+ G
Sbjct: 254 RSVIKPNLVSVISLLPIS--AALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGS 311
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLG--ACR 518
+ + NE +E + W +++ AC+
Sbjct: 312 VKALWQVFNET----VEKNEVSWNSIINGLACK 340
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
+ RI A LF+++ +D +WN MI GY G L+ A+ +F M + D+ +Y
Sbjct: 610 KCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIA 669
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEALRVFHGMPL-K 112
V++ V+ + F M + + + + M+ G ++EA ++ +P+
Sbjct: 670 VLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAP 729
Query: 113 DVVSWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
D W ++GA ++L A + E+ + + ++ N GR EA K+ +
Sbjct: 730 DANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRE 789
Query: 170 KMPAKDVQ 177
M ++ +
Sbjct: 790 LMKSRGAK 797
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 186/642 (28%), Positives = 326/642 (50%), Gaps = 43/642 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYNTVI 59
+ EA +F + + ++ M++GY +N LD+A+ F +M P FTY +
Sbjct: 125 LHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKV 184
Query: 60 AGLMQSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
G + +++ KE+ + V +V +++ Y L++EA ++F MP +D+V
Sbjct: 185 CG--DNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLV 242
Query: 116 SWNLVIGALVNCQRMDLAESY---FKEMGARDVASWTIMV------NGLVREGRIVEA-- 164
WN +I A +E G R + + + G +R GR +
Sbjct: 243 CWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYS 302
Query: 165 -RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
R F+ V ++ Y G VG A +F +M + + SW +I+G V +
Sbjct: 303 MRAGFESF----VNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDP 358
Query: 224 DAAISYF-KQMPETCEKTWNSIISVL--------IRNGLVKEAHSYLEKYPY-SNIASWT 273
AA+ F K M E E T +++ L + G + H L++ S+++
Sbjct: 359 GAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQG--RFVHKLLDQLELGSDVSVMN 416
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++I Y + V A ++FE + + + WN MI G +N E + +F +M+ P
Sbjct: 417 SLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKP 476
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D+ T SV+ ++L L + IH I+ ++ V+ A++ MYA+CG + +A F
Sbjct: 477 DSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLF 536
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ + +WN++I G HG + ALELFE+M+ KP+++TF+ VLSACS++GLV+
Sbjct: 537 DMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVE 596
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+G YF MK Y L+P HY +VDLLGR ++EA + + ++ IE + +V+GA+
Sbjct: 597 EGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKM---PIEPAISVFGAM 653
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
LGACRIH N+++GE A R+ +L+P++ G +++L +Y + + R+ M++ G++
Sbjct: 654 LGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQ 713
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
K PG S +++ + H F SG +SHP+ ++ L L I+
Sbjct: 714 KTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIK 755
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 150/292 (51%), Gaps = 24/292 (8%)
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
+++ + G + A +FQ + D+ + ++ G + +D A+S+F C +
Sbjct: 115 LVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFF------CRMRY 168
Query: 242 NSIISVL---------------IRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEV 285
+ + V+ +R G KE H L + SN+ + T V+ Y + V
Sbjct: 169 DGVRPVVYNFTYLLKVCGDNADLRKG--KEIHCQLIVNGFASNVFAMTGVVNMYAKCRLV 226
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A K+F+ M RD+ WN +I G +N G+ L+ ++M+E G PD+ T S+L
Sbjct: 227 EEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAV 286
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
+D+ +L +GR IH +++ F VS A++ MY++CG++ +A L F + ++SWN
Sbjct: 287 ADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWN 346
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
S+I G +G A+E+F++M + ++T +G L AC+ G V+QGR+
Sbjct: 347 SMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRF 398
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 160/374 (42%), Gaps = 59/374 (15%)
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
T K + I ++I+NGL YS T ++ + + G + A +VF+ +
Sbjct: 88 TSMKELHQFIPLIIKNGL------------YSEHLFQTKLVSLFCKFGSLHEAARVFQPI 135
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+ +++ M+ G N ++ + FF +M+ G P FT +L +C D L G+
Sbjct: 136 EDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGK 195
Query: 356 QIHAQAI--KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
+IH Q I A N F ++ MYA+C ++ A F +P D++ WN+II G A
Sbjct: 196 EIHCQLIVNGFASNVFAM--TGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQ 253
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSAC--------------------------- 446
+G+ + ALEL RM+ +PD IT V +L A
Sbjct: 254 NGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNV 313
Query: 447 --------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
S G V R FD M K + + ++D + G AM + ++
Sbjct: 314 STALVDMYSKCGSVGTARLIFDRMTGKTVVS-----WNSMIDGYVQNGDPGAAMEIFQKM 368
Query: 499 RADGIEVSP-TVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGR 556
+ +E++ TV GA L AC +++ G + + +LE ++ V L MY C R
Sbjct: 369 MDEQVEMTNVTVMGA-LHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKR 427
Query: 557 REDAKRIFAQMKEN 570
+ A IF ++
Sbjct: 428 VDIAAEIFENLQHK 441
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 104/252 (41%), Gaps = 51/252 (20%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIA 60
R+ A +F+ + + V+WN MI GY +NG ++ A+ F +M + D FT +VI
Sbjct: 427 RVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIP 486
Query: 61 GLMQ-----------------------------------SDNVQGAKEVFDGMEVRDVVT 85
L + V A+++FD M+ R V T
Sbjct: 487 ALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTT 546
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNCQRMDLAESYFKEMGAR 143
WN+MI GY +GL AL +F M K+V+ N V + L C L E F+ G+
Sbjct: 547 WNAMIDGYGTHGLGKAALELFEKMK-KEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSM 605
Query: 144 D--------VASWTIMVNGLVREGRIVEARKLFDKMPAKD-VQAWNLMIAGYLDNGCVGV 194
+ + MV+ L R R+ EA KMP + + + M+ + V +
Sbjct: 606 KKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVEL 665
Query: 195 AEDLFQKMHDRD 206
E ++ D D
Sbjct: 666 GEKAANRIFDLD 677
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 193/629 (30%), Positives = 312/629 (49%), Gaps = 61/629 (9%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D N ++ Y GFL++A LF++MPERD+ ++NT+I L + + A+ + M
Sbjct: 44 DVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMI 103
Query: 80 VRDVVTWN--SMISGY-VCNGLIDEAL-RVFHGMPLK-----DVVSWNLVIGALVNCQRM 130
+R V+ N S+IS + L DE + R H +K V + N ++ A C +
Sbjct: 104 LRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSV 163
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM------------------- 171
F E ++ SW ++NGL +GR +A F M
Sbjct: 164 KALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVL 223
Query: 172 -------PAKDVQAW-------------NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
K++ + N +I Y +G A +F + R++ SW
Sbjct: 224 VELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWN 283
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCE----KTWNSIISVLIRNGLV---KEAHSYLEKY 264
+I +R AI + QM ET E T+ +++ R G + KE H+ +
Sbjct: 284 AMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRI 343
Query: 265 PYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
++ +N ++ Y + G + SA VF + +D +N++I G E D + L F
Sbjct: 344 GLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLF 402
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
+M+ G PD +F V++ C++L L G+++H A++ VSN+++ Y +C
Sbjct: 403 SEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKC 462
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G I A F+ + D+ SWN++I G G E A+ +FE MR + D ++++ VL
Sbjct: 463 GRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVL 522
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
SACS+ GLV++G YF M + L+P HYTC+VDLLGR G ++EA L+ ++ I
Sbjct: 523 SACSHGGLVERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLP---I 578
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI 563
+WGALLGACRI+ N+++G A E + EL+P + G Y++L+ +Y GR ++A +I
Sbjct: 579 APDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKI 638
Query: 564 FAQMKENGVKKEPGCSWIQINDGGHVFLS 592
MK G KK PGCSW+QI D H F++
Sbjct: 639 RELMKSRGAKKNPGCSWVQIYDQVHAFVA 667
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 148/571 (25%), Positives = 260/571 (45%), Gaps = 88/571 (15%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+ D++ NT++ + A+ +FD M RDVV+WN++I NG EA +
Sbjct: 42 DTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFW 101
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
M L+ V+ NLV ++++ + ++ + E R + +++ V GL +
Sbjct: 102 MILRSVIKPNLV--SVISL--LPISAALEDEEMTRRIHCYSVKV-GLDSQ---------- 146
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
V N ++ Y G V +F + +++ SW +INGL R A++
Sbjct: 147 -------VTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALN 199
Query: 229 YFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSY-LEKYPYSNIASWTNVIVGYF 280
F+ M + + T +SI+ VL+ KE H + + ++I ++I Y
Sbjct: 200 AFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYA 259
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G A +F + R++ WN MI N L E ++F +QM+E+G P+ TFT+
Sbjct: 260 KSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTN 319
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
VL C+ L L G++IHA ++I VSN++I MYA+CG + SA F++ D
Sbjct: 320 VLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT-SRKD 378
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR---- 456
+S+N +I G + ++L LF MRL KPD ++FVGV+SAC+ + QG+
Sbjct: 379 EVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHG 438
Query: 457 -------------------YYFDCMK--------NKYFLQPRSAHYTCVVDLLGRFGLID 489
+Y C + N+ + ++ T ++ G G ++
Sbjct: 439 VALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILG-YGMIGELE 497
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-----EIAGERVMELEPNNSGVY 544
A+++ +R D ++ + A+L AC ++ G E+ +R LEP
Sbjct: 498 TAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQR---LEP------ 548
Query: 545 LILTEMYLSC--------GRREDAKRIFAQM 567
TEM+ +C G E+A ++ Q+
Sbjct: 549 ---TEMHYTCMVDLLGRAGFVEEAAKLIQQL 576
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M G D+ TF VL +CSD + G ++H K+ + V N ++ +Y CG
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHG-YAEKALELFERMRLTDFKPDDITFVGVLS 444
+ A F +P D++SWN+II L+ +G Y E F + + KP+ ++ + +L
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 445 ACSYAGLVDQG-RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
A L D+ C K L + +VD G+ G + + NE +
Sbjct: 121 IS--AALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNET----V 174
Query: 504 EVSPTVWGALLG--ACR 518
E + W +++ AC+
Sbjct: 175 EKNEVSWNSIINGLACK 191
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
+ RI A LF+++ +D +WN MI GY G L+ A+ +F M + D+ +Y
Sbjct: 461 KCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIA 520
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEALRVFHGMPLK- 112
V++ V+ + F M + + + + M+ G ++EA ++ +P+
Sbjct: 521 VLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAP 580
Query: 113 DVVSWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
D W ++GA ++L A + E+ + + ++ N GR EA K+ +
Sbjct: 581 DANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRE 640
Query: 170 KMPAKDVQ 177
M ++ +
Sbjct: 641 LMKSRGAK 648
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 207/691 (29%), Positives = 330/691 (47%), Gaps = 110/691 (15%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM------------- 52
I + +FD++ RD V+WN I + + A+ F M +M
Sbjct: 144 IGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALA 203
Query: 53 ----------------------------FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
FT N ++A + V +K +F+ RD+V
Sbjct: 204 CSNLGVMHGLRLGKQLHGYSLRVGDQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMV 263
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFKEM 140
+WN+MIS + + EAL F M L+ D V+ V+ A + +R+D+ KE+
Sbjct: 264 SWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVG----KEI 319
Query: 141 GARDVASWTIMVNGLVREG--------RIVEA-RKLFDKMPAKDVQAWNLMIAGYLDNGC 191
A + + ++ N V R VE+ R++FD + + ++ WN MI+GY NG
Sbjct: 320 HAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGL 379
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET--CEKTWNSIISVLI 249
A LF +M + GL+ + A++ MP CE N
Sbjct: 380 DEKALILFIEMIK---------VAGLLPNTTTMASV-----MPACVHCEAFSNK------ 419
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+ H Y K + N ++ Y MG++ + +F+ M RD WN MI
Sbjct: 420 -----ESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMIT 474
Query: 309 GLGENDLGEEGLKFFVQMKE----------------SGP-SPDNATFTSVLTICSDLPTL 351
G + L +M+ GP P+ T +VL C+ L +
Sbjct: 475 GYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAI 534
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
G++IHA AI+ TV +A++ MYA+CG + + F+ +P ++I+WN +I
Sbjct: 535 AKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMAC 594
Query: 412 AYHGYAEKALELFERM-----RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
HG E+ALELF+ M R + KP+++TF+ V +ACS++GL+ +G F MK+ +
Sbjct: 595 GMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDH 654
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
++P S HY CVVDLLGR G ++EA L+N + A+ +V W +LLGACRIH N+++G
Sbjct: 655 GVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVG--AWSSLLGACRIHQNVELG 712
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
E+A + ++ LEPN + Y++L+ +Y S G A + M++ GVKKEPGCSWI+ D
Sbjct: 713 EVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDE 772
Query: 587 GHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
H F++GD SHP+ +L L L ++ +E
Sbjct: 773 VHKFMAGDVSHPQSEQLHGFLETLSEKMRKE 803
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 150/619 (24%), Positives = 262/619 (42%), Gaps = 89/619 (14%)
Query: 17 PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAGLMQSDNVQGAK 72
P R T +W +R ++ A+ + +M D F + V+ + +++ +
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 73 EVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC 127
++ G V N++++ Y G I + +VF + +D VSWN I AL
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 128 QRMDLAESYFK--EMGARDVASWTIMVNGL----------VREGRIVEARKLFDKMPAKD 175
++ + A F+ +M +++S+T++ L +R G+ + L ++ +
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSL--RVGDQK 230
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP- 234
N ++A Y G V ++ LF+ DRD+ SW +I+ S R A+++F+ M
Sbjct: 231 TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVL 290
Query: 235 ETCEKTWNSIISVLI------RNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEM 282
E E +I SVL R + KE H+Y+ + N N VG Y
Sbjct: 291 EGVELDGVTIASVLPACSHLERLDVGKEIHAYVLR----NNDLIENSFVGSALVDMYCNC 346
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSV 341
+V S +VF+ + R + +WN MI G N L E+ L F++M K +G P+ T SV
Sbjct: 347 RQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASV 406
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
+ C IH A+K+ + V NA++ MY+R G + + F S+ + D
Sbjct: 407 MPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDR 466
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTD-----------------FKPDDITFVGVLS 444
+SWN++I G G AL L M+ + +KP+ IT + VL
Sbjct: 467 VSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLP 526
Query: 445 ACSYAGLVDQGR-YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
C+ + +G+ + ++N L + +VD+ + G ++ + + NE+ +
Sbjct: 527 GCAALAAIAKGKEIHAYAIRN--MLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNV 584
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK-- 561
W L+ AC +H GE +EL N M GR +AK
Sbjct: 585 ----ITWNVLIMACGMHGK-------GEEALELFKN----------MVAEAGRGGEAKPN 623
Query: 562 -----RIFAQMKENGVKKE 575
+FA +G+ E
Sbjct: 624 EVTFITVFAACSHSGLISE 642
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 127/569 (22%), Positives = 227/569 (39%), Gaps = 116/569 (20%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI 59
R+ +++ LF+ RD V+WN MI + ++ A+ F M E D T +V+
Sbjct: 245 GRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVL 304
Query: 60 AG-----------------LMQSD-------------------NVQGAKEVFDGMEVRDV 83
L +D V+ + VFD + R +
Sbjct: 305 PACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRI 364
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMP-----LKDVVSWNLVIGALVNCQRMDLAES--- 135
WN+MISGY NGL ++AL +F M L + + V+ A V+C+ ES
Sbjct: 365 ELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHG 424
Query: 136 YFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
Y ++G + D +++ R G++ + +FD M +D +WN MI GY+ +G
Sbjct: 425 YAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSN 484
Query: 195 AEDLFQKMHDRDLT--SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A L +M + T K + AI+ +P + ++ + +
Sbjct: 485 ALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGC------AALAAIAKG- 537
Query: 253 LVKEAHSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
KE H+Y + S+I + ++ Y + G + + +VF M ++V WNV+I G
Sbjct: 538 --KEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACG 595
Query: 312 ENDLGEEGLKFFVQM-KESG----PSPDNATFTSVLTICSDLPTLDLG-----RQIHAQA 361
+ GEE L+ F M E+G P+ TF +V CS + G R H
Sbjct: 596 MHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHG 655
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH--DIISWNSIICGLAYHGYAEK 419
++ + + V + + R G ++ A +++P + +W+S++ H E
Sbjct: 656 VEPTSDHYACV----VDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVE- 710
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR-SAHYTCV 478
+G ++A KN L+P ++HY +
Sbjct: 711 --------------------LGEVAA-----------------KNLLHLEPNVASHYVLL 733
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
++ GL ++AM + +R G++ P
Sbjct: 734 SNIYSSAGLWNKAMEVRKNMRQMGVKKEP 762
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------- 48
R ++ ++ +FD M RD V+WN MI GY +G NA+ L ++M
Sbjct: 447 RMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDN 506
Query: 49 --------ERDMFTYNTVIAGLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCN 96
+ + T TV+ G + KE+ M D+ ++++ Y
Sbjct: 507 DDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKC 566
Query: 97 GLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
G ++ + RVF+ MP K+V++WN++I A + + A FK M A
Sbjct: 567 GCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVA 612
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 184/610 (30%), Positives = 313/610 (51%), Gaps = 43/610 (7%)
Query: 27 MIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVT- 85
+++ Y + G LD+A +F +MP+R+++++ +++ + + A +F+ +++ D+
Sbjct: 100 LLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLE 159
Query: 86 -WNSMISGYVCNGL-IDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
+ + +C GL + E R HG+ +K C M A F +
Sbjct: 160 FFVFPVVLKLCGGLRVLELGRQLHGVVIK-------------RCADMGSALKIFSGFSVK 206
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMP--AKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+V S+ M+ G G + +A++LFD+M KD +WN MI+GY DN A +F+
Sbjct: 207 NVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRD 266
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT------WNS-----IISVLIR 250
+ + G V + D A ++ E + WN+ ++ + +
Sbjct: 267 LLMEEGIEADSFTLGSVLAACADMA--SLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSK 324
Query: 251 NGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT----TRDVTVWNVM 306
+K A + + A+W +I GY ++ + + + M +V WN +
Sbjct: 325 CEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGI 384
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
I G EN E L+ F +M+ S PD T +L C+ L T+ G+Q+HA +I+
Sbjct: 385 ISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGY 444
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+ A++ MYA+CG+I+ A+ ++ + +++S N+++ A HG+ ++ + LF
Sbjct: 445 ELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRN 504
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
M F+PD +TF+ VLS+C +AG V+ G +FD M Y + P HYTC+VDLL R G
Sbjct: 505 MLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLM-TYYNVTPSLKHYTCIVDLLSRAG 563
Query: 487 LIDEAMNLLNEI--RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
+DEA L+ +I + D + +WGALLG C I N+++GEIA E ++ELEPNN+G Y
Sbjct: 564 RLDEAYELVKKIPRKPDSV-----MWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNY 618
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
++L +Y GR D R +K+ G+ K PGCSWI+ + HVFLS D SH K +
Sbjct: 619 VLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDIY 678
Query: 605 YLLNLLHTEI 614
L+ L+T +
Sbjct: 679 TTLDNLNTHM 688
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 132/582 (22%), Positives = 246/582 (42%), Gaps = 121/582 (20%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM------------- 52
+ +A +F KMPQR+ +W ++ + +G+ + A+ LF ++ D+
Sbjct: 110 LDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKL 169
Query: 53 ---------------------------------------FTYNTVIAGLMQSDNVQGAKE 73
+YNT+I G ++ NV+ AKE
Sbjct: 170 CGGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKE 229
Query: 74 VFDGMEV--RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMD 131
+FD ME+ +D ++WNSMISGY N L DEAL +F + +++ + + V D
Sbjct: 230 LFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACAD 289
Query: 132 LAE-SYFKEMGARDVA---SWTIMVNGLVRE-----GRIVEARKLFDKMPAKDVQAWNLM 182
+A KE+ A+ V W V G + E + A+ FD + +D WN++
Sbjct: 290 MASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVL 349
Query: 183 IAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
I+GY + ++L QKM + ++ +W +I+G V + + A+ F +M +
Sbjct: 350 ISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSL 409
Query: 239 KTWNSIISVL---------IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
+ + ++ I G AHS + Y ++ ++ Y + G + A+
Sbjct: 410 RPDIYTVGIILPACARLATIARGKQVHAHSIRQGYEL-DVHIGAALVDMYAKCGSIKHAM 468
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
+V+ ++ ++ N M+ + G+EG+ F M +G PD+ TF SVL+ C
Sbjct: 469 QVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSC---- 524
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
+HA A++ F ++T Y N+ +L ++ + D++S
Sbjct: 525 -------VHAGAVETGHEFFD-----LMTYY----NVTPSLKHYTCIV--DLLS------ 560
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
A + E +E ++ KPD + + +L C G V+ G + + L+
Sbjct: 561 ------RAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIE---LE 611
Query: 470 P-RSAHYTCVVDLL---GRFGLIDEAMNLLNEIRADGIEVSP 507
P + +Y + +L GR+ +D + I+ G+ SP
Sbjct: 612 PNNTGNYVLLANLYAYAGRWHDLDRTRQM---IKDRGMHKSP 650
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D++T+ S+L C TL+LG+Q+HA +K + V ++ MY R G + A L F
Sbjct: 61 DSSTYASLLESCR---TLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVF 117
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+P ++ SW +I+ HGY E+AL LFE+++L D + F VL C +++
Sbjct: 118 VKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLE 177
Query: 454 QGR 456
GR
Sbjct: 178 LGR 180
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 200/669 (29%), Positives = 320/669 (47%), Gaps = 80/669 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER----- 50
R A + A LF++ P + WN ++R YF G + LF+QM ER
Sbjct: 48 RYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYT 107
Query: 51 -------------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
DMF + +I + + A +VF
Sbjct: 108 VSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYP 167
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNCQRM---DLAE 134
+DVV W S+I+GY NG + AL F M + + VS + V + A C ++ +L
Sbjct: 168 KQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGR 227
Query: 135 SYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
S + R + + N ++ + G I A LF +MP KD+ +W+ M+A Y DNG
Sbjct: 228 SVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNG 287
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
A +LF +M D+ + +N + +A+ C + N +
Sbjct: 288 AETNALNLFNEMIDKRIE---------LNRVTVISAL-------RACASSSN------LE 325
Query: 251 NGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
G K H Y + +I T ++ Y + +AI +F M +DV W V+ G
Sbjct: 326 EG--KHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSG 383
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
E + + L F M G PD +L S+L + +HA K +
Sbjct: 384 YAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNN 443
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-R 428
+ ++I +YA+C +I +A F + D+++W+SII +HG E+AL+LF +M
Sbjct: 444 EFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSN 503
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
+D KP+D+TFV +LSACS+AGL+++G F M N+Y L P + HY +VDLLGR G +
Sbjct: 504 HSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGEL 563
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
D+A++++NE+ ++ P VWGALLGACRIH NIK+GE+A + L+PN++G Y +L+
Sbjct: 564 DKALDMINEM---PMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLS 620
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
+Y DA ++ +KEN KK G S ++I + H F++ D H + ++ +L
Sbjct: 621 NIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYGMLR 680
Query: 609 LLHTEIERE 617
L ++ E
Sbjct: 681 KLDARMKEE 689
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 145/342 (42%), Gaps = 49/342 (14%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T + V Y + A K+FE + V +WN ++ E L F QM +
Sbjct: 40 TKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAIT 99
Query: 333 ---PDNATFTSVLTICSDLPTLDLGRQIHA--QAIKIARNQFTTVSNAMITMYARCGNIQ 387
PDN T + L CS L L+LG+ IH + KI + F V +A+I +Y++CG +
Sbjct: 100 EERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMF--VGSALIELYSKCGQMN 157
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSAC 446
A+ F+ P D++ W SII G +G E AL F RM L PD +T V SAC
Sbjct: 158 DAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASAC 217
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI------------------ 488
+ + GR +K + F + +++L G+ G I
Sbjct: 218 AQLSDFNLGRSVHGFVKRRGF-DTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISW 276
Query: 489 -------------DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
A+NL NE+ IE++ + L AC +N++ G+ + +
Sbjct: 277 SSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLE----EGKHIHK 332
Query: 536 LEPN-----NSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
L N + V L +MY+ C ++A +F +M + V
Sbjct: 333 LAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDV 374
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
T CS + Q+H+Q +K+ + V + +YAR ++ A F P +
Sbjct: 13 TCCSKISI----PQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVY 68
Query: 403 SWNSIICGLAYHGYAEKALELFERMR---LTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
WN+++ G + L LF +M +T+ +PD+ T L +CS ++ G+
Sbjct: 69 LWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIH 128
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
+K K + +++L + G +++A+ + E
Sbjct: 129 GFLKKKKIDNDMFVG-SALIELYSKCGQMNDAVKVFTE 165
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 186/602 (30%), Positives = 320/602 (53%), Gaps = 30/602 (4%)
Query: 32 FKNGFLDNAMCLFNQMPERDMFTYNTVIAG---LMQSDNVQGAKEVFDGMEVRDVVTWNS 88
FK G +A + N + +F+ + +I+ L D + ++ +F ++ ++ WN+
Sbjct: 22 FKQGLQIHAQTIVNGL-HHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNT 80
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWN-LVIGALVN-CQRMDLAE------SYFKEM 140
MI GY + EA+ ++ M K + N L+N C R+ E S+ +
Sbjct: 81 MIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKH 140
Query: 141 G-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
G D+ +++ G + AR LFD+ +D+ ++N MI GY + A LF
Sbjct: 141 GFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLF 200
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIIS-VLIRN------- 251
+M + + + L + + + KQ+ K SI S +L+++
Sbjct: 201 GEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYA 260
Query: 252 --GLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
GL+ A S + A+W++++ GY GE+ A K+F M RDV W MI
Sbjct: 261 KCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMIS 320
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR-N 367
G + E L+ F +M+ G PD T +VL+ C+ L DLG++++ Q I+ N
Sbjct: 321 GYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFN 380
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVP--IHDIISWNSIICGLAYHGYAEKALELFE 425
Q T ++ A++ MYA+CG+I SAL F V + +NS+I GLA HG E A+ +F
Sbjct: 381 QNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFR 440
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRF 485
+ T KPD++TFVGVL AC ++GL+++G+ F+ M N Y ++P+ HY C+VDLLGR+
Sbjct: 441 ELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRY 500
Query: 486 GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL 545
G ++EA +L+ ++ E + +W ALL ACR H N+K+GEIAG++++E+E + Y+
Sbjct: 501 GCLEEAYDLVQKMP---FEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYV 557
Query: 546 ILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRY 605
+L+ + + E+A+++ M+++G++K PG S+I++ H F++ D SHP+ +
Sbjct: 558 LLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIEL 617
Query: 606 LL 607
+L
Sbjct: 618 ML 619
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 191/424 (45%), Gaps = 59/424 (13%)
Query: 18 QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
+ D N +I Y G L+ A LF++ RD+ +YNT+I G + + + A +F
Sbjct: 143 ESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGE 202
Query: 78 ME----VRDVVTWNSMISGYVCNGLIDEAL-RVFHGMPLKDVVSWN---LVIGALVN--- 126
M+ + D T+ ++ S VC+ L + + + H K++ S + L+ A+V+
Sbjct: 203 MQNSGILPDEFTFVALFS--VCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYA 260
Query: 127 -CQRMDLAESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
C +++AE F MG ++ A+W+ MV G R G I ARKLF+ M +DV +W MI+
Sbjct: 261 KCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMIS 320
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI 244
GY G A +LF++M + P+ E T ++
Sbjct: 321 GYSQAGQCSEALELFKEMEALGIK-------------------------PD--EVTLVAV 353
Query: 245 ISVLIRNGLV----KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRD 299
+S R G + H Y+E ++ T ++ Y + G + SA+++F +
Sbjct: 354 LSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNM 413
Query: 300 VT--VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
T V+N MI GL ++ LGE + F ++ +G PD TF VL C ++ G+++
Sbjct: 414 KTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKL 473
Query: 358 -----HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGL 411
+A IK + M+ + R G ++ A +P + + W +++
Sbjct: 474 FESMFNAYGIKPQMEHY----GCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSAC 529
Query: 412 AYHG 415
HG
Sbjct: 530 RTHG 533
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 149/313 (47%), Gaps = 26/313 (8%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTV--IAGL 62
A+ LFD+ RD V++N MI+GY + ++A+CLF +M D FT+ + + +
Sbjct: 165 ARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSV 224
Query: 63 MQSDNV--QGAKEVFDGMEVRD--VVTWNSMISGYVCNGLIDEALRVFHGMPL-KDVVSW 117
+ NV Q +V+ + D ++ ++++ Y GLI+ A RVF M K +W
Sbjct: 225 LNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAW 284
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
+ ++ C +++A F M RDV SWT M++G + G+ EA +LF +M A ++
Sbjct: 285 SSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIK 344
Query: 178 AWNLMIAGYLDN----GCVGVAEDLFQKMHDRDLTSWKQLINGLV-----NSRRIDAAIS 228
+ + L G + + L+ + + + + ++ V ID+A+
Sbjct: 345 PDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALE 404
Query: 229 YFKQMPETCEK--TWNSIISVLIRNGLVKEAHSYLEKYPYSNI----ASWTNVIVGYFEM 282
F+++ + + +NS+I+ L ++GL + A + + + + ++ V+
Sbjct: 405 IFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHS 464
Query: 283 GEVGSAIKVFELM 295
G + K+FE M
Sbjct: 465 GLIEEGKKLFESM 477
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 128/300 (42%), Gaps = 42/300 (14%)
Query: 6 IQEAQNLFDKM-PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
I A+ +F M + W+ M+ GY + G ++ A LFN M ERD+ ++ +I+G Q
Sbjct: 265 INIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQ 324
Query: 65 SDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
+ A E+F ME D VT +++S G D R++H V + N +
Sbjct: 325 AGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTI 384
Query: 121 IGALV-----NCQRMDLAESYFKEMGARDVASWTI--MVNGLVREGRIVEARKLFDKMPA 173
+ A V C +D A F+ +G + M+ GL + G A +F ++ +
Sbjct: 385 LTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELIS 444
Query: 174 KDVQAWNLMIAGYL-DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
++ + G L G G+ E+ K+L + N+ I + ++
Sbjct: 445 TGLKPDEVTFVGVLCACGHSGLIEE------------GKKLFESMFNAYGIKPQMEHYGC 492
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIV-----GYFEMGEVG 286
M + +L R G ++EA+ ++K P+ +N W ++ G ++GE+
Sbjct: 493 M-----------VDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIA 541
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 21/236 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
R I A+ LF+ M +RD ++W MI GY + G A+ LF +M + D T
Sbjct: 293 RCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVA 352
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN-----GLIDEALRVFH--GMP 110
V++ + K ++ V N++++ V + G ID AL +F G
Sbjct: 353 VLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKN 412
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARK 166
+K +N +I L + A + F+E+ + + + G++ G I E +K
Sbjct: 413 MKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKK 472
Query: 167 LFDKM-----PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM-HDRDLTSWKQLING 216
LF+ M ++ + M+ GC+ A DL QKM + + W+ L++
Sbjct: 473 LFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSA 528
>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 692
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 199/647 (30%), Positives = 319/647 (49%), Gaps = 65/647 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNA--MCLFNQMPERDMFTYNTVIAGLM 63
I +A+ +F+ + +D V+WN +I GY + G + + M LF +M + +G+
Sbjct: 61 IVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVF 120
Query: 64 QSDNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+ + E F G++ DV +S+I+ Y G + +A +VF +P ++
Sbjct: 121 TA--ASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERN 178
Query: 114 VVSWNLVIGALVNCQRM-----DLAESYFKEMGARDVASWT-----IMVNGLVREGRIVE 163
VSW +I +RM +L +E GA D +T + V LV G+ +
Sbjct: 179 TVSWATIISGYA-MERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIH 237
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
L + + + N ++ Y GC+ A F+ D+D +W +I G +
Sbjct: 238 CLALKNGLLSI-ASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDS 296
Query: 224 DAAISYFKQMP----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
A++ F M + E T+ +I+ G ++E + + YS A + I Y
Sbjct: 297 HEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGK---QIHGYSLKAGYECQI--Y 351
Query: 280 FEMG------EVGSAI---KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
F G + GS + K F+ + D+ +W +M+
Sbjct: 352 FRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTS------------------CRMQMER 393
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
P T SVL CS L L+ G+QIHAQ IK + + +A+ TMYA+CG+++
Sbjct: 394 IMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGN 453
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
L F +P DI++WN++I GL+ +G KALELFE +R KPD +TFV VLSACS+ G
Sbjct: 454 LVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMG 513
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
LV++G+ YF M +++ + PR HY C+VD+L R G + E I + I+ +W
Sbjct: 514 LVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAGKLHETKEF---IESATIDHGMCLW 570
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
LLGACR + N ++G AGE++MEL S Y++L+ +Y + GR +D +R+ MK
Sbjct: 571 RILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLR 630
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
GV KEPGCSWI++ HVF+ GD HP+ ++ L L ++ E
Sbjct: 631 GVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDE 677
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 163/391 (41%), Gaps = 42/391 (10%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA 146
NS+++ Y G I +A VF + KDVVSWN +I Q+ + S+ E+ R A
Sbjct: 49 NSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGY--SQKGTVGYSFVMELFQRMRA 106
Query: 147 SWTIMVNGLVREGRIVEAR---KLFDKMPAK----------DVQAWNLMIAGYLDNGCVG 193
T + NG G A + F + A DV + +I Y GC+
Sbjct: 107 ENT-LPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCML 165
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF----KQMPETCEKTWNSIISVLI 249
A +F + +R+ SW +I+G R A F ++ + + S++S L
Sbjct: 166 DARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALT 225
Query: 250 RNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNV 305
LV K+ H K +IAS N +V Y + G + A K FEL +D W+
Sbjct: 226 VPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSA 285
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
MI G + E L F M +G P TF V+ CSD+ L+ G+QIH ++K
Sbjct: 286 MITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAG 345
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
+ A+CG++ A F + DI+ W S
Sbjct: 346 YECQIYFRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTSC------------------ 387
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
RM++ P ++T VL ACS ++QG+
Sbjct: 388 RMQMERIMPHELTMASVLRACSSLAALEQGK 418
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 123/265 (46%), Gaps = 12/265 (4%)
Query: 255 KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
K H+ L + + TN +V Y + G + A VFE +T +DV WN +I G +
Sbjct: 30 KAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQK 89
Query: 314 DLGEEGLKF----FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
G G F F +M+ P+ TF+ V T S P G Q HA AIK +
Sbjct: 90 --GTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYD 147
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
V +++I MY + G + A F ++P + +SW +II G A A +A ELF MR
Sbjct: 148 VFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFLLMRR 207
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+ D + VLSA + LV G+ C+ K L ++ +V + G+ G +D
Sbjct: 208 EEGAHDKFIYTSVLSALTVPDLVHYGK-QIHCLALKNGLLSIASVGNALVTMYGKCGCLD 266
Query: 490 EAMNLLNEIRADGIEVSPTVWGALL 514
+A E+ D +++ W A++
Sbjct: 267 DAFKTF-ELSGDKDDIT---WSAMI 287
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P + +F +L C+ L G+ IHAQ ++ ++N+++ +YA+CG+I A L
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKA--LELFERMRLTDFKPDDITFVGVLSACS 447
F S+ D++SWN +I G + G + +ELF+RMR + P+ TF GV +A S
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAAS 124
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 175/560 (31%), Positives = 301/560 (53%), Gaps = 44/560 (7%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVN 126
A +VFD M R++VTW MI+ + G +A+ +F M L D +++ V+ A
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 127 CQRMDLAE---SYFKEMG-ARDVASWTIMVNGLVR---EGRIVEARKLFDKMPAKDVQAW 179
+ L + S +G A DV +V+ + +G + ++RK+F++MP +V +W
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 180 NLMIAGYLDNG-CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
+I Y +G C A +LF KM I+G + F + + C
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKM-----------ISGHIRPNHFS-----FSSVLKACG 172
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTT 297
+ ++ +SY K +++ N ++ Y G + A K F+++
Sbjct: 173 NLSDPYTG--------EQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFE 224
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
+++ +N ++ G +N EE F ++ ++G TF S+L+ + + + G QI
Sbjct: 225 KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQI 284
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H + +K + NA+I+MY+RCGNI++A F+ + ++ISW S+I G A HG+A
Sbjct: 285 HGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFA 344
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
+ALE+F +M T KP++IT+V VLSACS+ G++ +G+ +F+ M ++ + PR HY C
Sbjct: 345 TRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYAC 404
Query: 478 VVDLLGRFGLIDEAMNLLNE--IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
+VDLLGR GL+ EAM +N + AD + VW LLGACR+H N ++G A E ++E
Sbjct: 405 MVDLLGRSGLLVEAMEFINSMPLMADAL-----VWRTLLGACRVHGNTELGRHAAEMILE 459
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
EP++ Y++L+ ++ S G+ +D +I MKE + KE GCSWI++ + H F G++
Sbjct: 460 QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGET 519
Query: 596 SHPKFHRLRYLLNLLHTEIE 615
SHP+ ++ L+ L ++I+
Sbjct: 520 SHPQAWQIYQELDQLASKIK 539
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 210/472 (44%), Gaps = 60/472 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYNTVIA-- 60
A +FDKMP+R+ VTW +MI + + G +A+ LF M P+R FTY++V++
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDR--FTYSSVLSAC 66
Query: 61 ---GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGY---VCNGLIDEALRVFHGMPLKDV 114
GL+ ++ + G+ + DV S++ Y +G +D++ +VF MP +V
Sbjct: 67 TELGLLALGKQLHSRVIRLGLAL-DVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 125
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGR------IVEARKLF 168
+SW +I A D KE + + M++G +R + L
Sbjct: 126 MSWTAIITAYAQSGECD------KEA----IELFCKMISGHIRPNHFSFSSVLKACGNLS 175
Query: 169 DKMPAKDVQAW-------------NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
D + V ++ N +I+ Y +G + A F + +++L S+ +++
Sbjct: 176 DPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVD 235
Query: 216 GLVNSRRIDAAISYFKQMPET----CEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSN 268
G + + + A F ++ +T T+ S++S G + ++ H L K Y +
Sbjct: 236 GYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKS 295
Query: 269 IASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
N ++ Y G + +A +VF M R+V W MI G ++ L+ F +M
Sbjct: 296 NQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML 355
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGN 385
E+G P+ T+ +VL+ CS + + G Q H ++ + + M+ + R G
Sbjct: 356 ETGTKPNEITYVAVLSACSHVGMISEG-QKHFNSMYKEHGIVPRMEHYACMVDLLGRSGL 414
Query: 386 IQSALLEFSSVPI-HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+ A+ +S+P+ D + W +++ HG E E + + +PDD
Sbjct: 415 LVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAE--MILEQEPDD 464
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 107/233 (45%), Gaps = 49/233 (21%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
R+ R+++A+ FD + +++ V++N ++ GY KN + A LFN++ + + FT+ +
Sbjct: 208 RSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFAS 267
Query: 58 VIAGLM-----------------------------------QSDNVQGAKEVFDGMEVRD 82
+++G + N++ A +VF+ ME R+
Sbjct: 268 LLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRN 327
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAESYF- 137
V++W SMI+G+ +G AL +FH M + +++ V+ A + + + +F
Sbjct: 328 VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFN 387
Query: 138 ---KEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMP-AKDVQAWNLMIAG 185
KE G + + MV+ L R G +VEA + + MP D W ++
Sbjct: 388 SMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 440
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 158/361 (43%), Gaps = 32/361 (8%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDN-AMCLFNQMPE----RDMFTYNT 57
+ + +++ +F++MP+ + ++W +I Y ++G D A+ LF +M + F++++
Sbjct: 107 DGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSS 166
Query: 58 VIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V+ + ++V+ G+ + V NS+IS Y +G +++A + F + K
Sbjct: 167 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVG-NSLISMYARSGRMEDARKAFDILFEK 225
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVEARKLF 168
++VS+N ++ + + A F E+ + ++ +++G G + + ++
Sbjct: 226 NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIH 285
Query: 169 DKMPAKDVQA----WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
++ ++ N +I+ Y G + A +F +M DR++ SW +I G
Sbjct: 286 GRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFAT 345
Query: 225 AAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEK-YPYSNIASWTNVIVGY 279
A+ F +M ET K T+ +++S G++ E + Y I
Sbjct: 346 RALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACM 405
Query: 280 FE-MGEVGSAIKVFELMTT----RDVTVWNVMIFGL---GENDLGEEGLKFFVQMKESGP 331
+ +G G ++ E + + D VW ++ G +LG + ++ + P
Sbjct: 406 VDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDP 465
Query: 332 S 332
+
Sbjct: 466 A 466
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 214/750 (28%), Positives = 349/750 (46%), Gaps = 145/750 (19%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++A+ +FD M RD V WN M+ GY G + AM L +M ++ + + L+ +
Sbjct: 104 VEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLA 163
Query: 66 DNVQGAKEV-----------------------------------------FDGMEVRDVV 84
+GA E+ FD M VR++V
Sbjct: 164 --CEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLPLLFDLMVVRNIV 221
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNCQRM-------DLAES 135
+WN+MISGY G +AL +F M L D V ++ V + A+ C + + +
Sbjct: 222 SWNAMISGYYDVGDYFKALELFVQM-LVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQL 280
Query: 136 YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
K D+ ++N G + + +LF+ +P +D WN MI+ Y GC A
Sbjct: 281 AIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEA 340
Query: 196 EDLFQKMHDRD-----------LTSWKQLINGLVNSR-----------RIDAAI-----S 228
DLF +M L+ ++L +GL+ + RIDA++ S
Sbjct: 341 MDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLS 400
Query: 229 YFKQMP--ETCEK-----------TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNV 275
+ ++ E+ +K +WN++I L RN L +A E+ S I +
Sbjct: 401 MYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYT 460
Query: 276 IVG---------------------------------------YFEMGEVGSAIKVFELMT 296
I+ Y G+ +A +FE
Sbjct: 461 IISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCP 520
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
RD+ WN MI +N+ + L F +M S P++ T +VL+ + L TL G+
Sbjct: 521 DRDLISWNAMIASYVKNNQAHKALLLFHRMI-SEAEPNSVTIINVLSSFTHLATLPQGQS 579
Query: 357 IHAQAIKIARNQFT-----TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
+HA + R F+ +++NA ITMYARCG++QSA F ++P +IISWN++I G
Sbjct: 580 LHAY---VTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGY 636
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
+G A+ F +M F+P+ +TFV VLSACS++G ++ G F M + + P
Sbjct: 637 GMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPE 696
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
HY+C+VDLL R G IDEA ++ + IE +VW ALL +CR +++ K + E
Sbjct: 697 LVHYSCIVDLLARGGCIDEAREFIDSM---PIEPDASVWRALLSSCRAYSDAKQAKTIFE 753
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
++ +LEP N+G Y++L+ +Y + G + +RI +KE G++K PG SWI + + H F
Sbjct: 754 KLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFS 813
Query: 592 SGDSSHPKFHRLRYLLNLLHTEIEREILFD 621
+GD SHP+ ++ L++L + + RE +D
Sbjct: 814 AGDRSHPQSDKIYAKLSILLSSM-RETGYD 842
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 205/459 (44%), Gaps = 40/459 (8%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTV 58
N ++ + LF+ +P RD WN MI Y G + AM LF +M ++D T +
Sbjct: 303 NGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIM 362
Query: 59 I-------AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+ +GL++ ++ A + GM + D N+++S Y ++ ++F M
Sbjct: 363 LSMCEELASGLLKGKSLH-AHVIKSGMRI-DASLGNALLSMYTELNCVESVQKIFDRMKG 420
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA--SWTIMVNGLVRE-------GRIV 162
D++SWN +I AL A F+ M ++ S+TI+ E GR +
Sbjct: 421 VDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSI 480
Query: 163 EARKLFDKMPAKDVQAWNLMIAG-YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
+ K + Q +A Y++ G A DLF+ DRDL SW +I V +
Sbjct: 481 HGYVM--KHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNN 538
Query: 222 RIDAAISYFKQMPETCEKTWNSIISVL--------IRNGLVKEAHSYLEKYPYS---NIA 270
+ A+ F +M E +II+VL + G + H+Y+ + +S +++
Sbjct: 539 QAHKALLLFHRMISEAEPNSVTIINVLSSFTHLATLPQG--QSLHAYVTRRGFSLGLDLS 596
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
I Y G + SA +F+ + R++ WN MI G G N G + + F QM E G
Sbjct: 597 LANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDG 656
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQI-HAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
P+ TF SVL+ CS +++G Q+ H+ + ++ + AR G I A
Sbjct: 657 FRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEA 716
Query: 390 LLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERM 427
S+PI D W +++ + A++A +FE++
Sbjct: 717 REFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKL 755
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 138/530 (26%), Positives = 232/530 (43%), Gaps = 69/530 (13%)
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEA-LRVFHGMP----LKDVVSWNLVIGALVNCQRMDL 132
++++D WNS+I + N D+A L + M L + + LV+ A ++
Sbjct: 13 IQIKDPKHWNSVIK-HQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71
Query: 133 AESYFKEMGARD----VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD 188
+S + + D V T +V+ + G + +AR +FD M +DV WN M+ GY+
Sbjct: 72 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 131
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL 248
GC A L ++M +L NSR + A + + E + +
Sbjct: 132 WGCYEEAMLLVREMGRENLRP---------NSRTMVALLLACEGASEL--RLGRGVHGYC 180
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+RNG+ + P+ A ++G++ ++ +F+LM R++ WN MI
Sbjct: 181 LRNGM-------FDSNPHVATA-----LIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMIS 228
Query: 309 GLGENDLGE--EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
G D+G+ + L+ FVQM D T + C++L +L LG+QIH AIK
Sbjct: 229 GY--YDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEF 286
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+ + NA++ MY+ G+++S+ F SVP D WNS+I A G E+A++LF R
Sbjct: 287 VEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIR 346
Query: 427 MRLTDFKPDDITFVGVLSACS--YAGLVDQGRYYFDCMKNKYFLQPRSAH-----YT--- 476
M+ K D+ T V +LS C +GL+ + +K+ + + YT
Sbjct: 347 MQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELN 406
Query: 477 CV------------VDL---------LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
CV VD+ L R L +A L +R I+ + ++L
Sbjct: 407 CVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILA 466
Query: 516 ACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIF 564
AC + G VM+ N + L +MY++CG A+ +F
Sbjct: 467 ACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLF 516
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 174/413 (42%), Gaps = 50/413 (12%)
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA--- 257
K+ +D W +I N + A +S + QM N+ + ++++ + A
Sbjct: 12 KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71
Query: 258 ----HSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
H ++ ++ T V+ Y + G V A VF+ M+ RDV +WN M++G
Sbjct: 72 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 131
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR-NQFTT 371
EE + +M P++ T ++L C L LGR +H ++ +
Sbjct: 132 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 191
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
V+ A+I Y R +++ L F + + +I+SWN++I G G KALELF +M + +
Sbjct: 192 VATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE 250
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYY------FDCMKNKYFLQP-----------RSAH 474
K D +T + + AC+ G + G+ F+ +++ Y L S+H
Sbjct: 251 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 310
Query: 475 -------------YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
+ ++ FG +EAM+L ++++G++ +L C
Sbjct: 311 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCE--- 367
Query: 522 NIKVGEIAGERVMELEPNNSGVYL------ILTEMYLSCGRREDAKRIFAQMK 568
+ G + G + + SG+ + L MY E ++IF +MK
Sbjct: 368 ELASGLLKG-KSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMK 419
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 54/202 (26%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R +Q A+N+F +P+R+ ++WN MI GY NG +AM F+QM E D F N
Sbjct: 607 RCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLE-DGFRPNG---- 661
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
VT+ S++S +G I+ L++FH M V +N+
Sbjct: 662 ----------------------VTFVSVLSACSHSGFIEMGLQLFHSM----VQDFNVT- 694
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWN 180
++ ++ +V+ L R G I EAR+ D MP + D W
Sbjct: 695 ---------------------PELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWR 733
Query: 181 LMIAGYLDNGCVGVAEDLFQKM 202
+++ A+ +F+K+
Sbjct: 734 ALLSSCRAYSDAKQAKTIFEKL 755
>gi|222622248|gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
Length = 518
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 264/482 (54%), Gaps = 15/482 (3%)
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ----AWN 180
C MD A F+ + + + SW I++ G +EG +A ++ M + ++
Sbjct: 3 TKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYS 62
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
++A + V A +F K+ +T+W L++G + I F++M +
Sbjct: 63 NLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQP 122
Query: 241 WNSIISVLIRN----GLV---KEAHSYLEKYPYSN-IASWTNVIVGYFEMGEVGSAIKVF 292
+ ++V++ + G++ ++ HS ++ N + + ++ Y + G++G A +F
Sbjct: 123 DRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIF 182
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
MT RDV WN +I GL + L +E FF QM+E+G P +++ S++ CS L ++
Sbjct: 183 NKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIP 242
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
GRQIHAQ +K +Q V +A+I MYA+CGN+ A L F ++ + +I++WN +I G A
Sbjct: 243 HGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYA 302
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
+G +KA+ELFE M T+ KPD +TF+ VL+ CS++GLVD+ +F+ M+N Y + P +
Sbjct: 303 QNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLA 362
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
HYTC++D LGR G E L++++ P +W LL AC +H+N ++G+ A E
Sbjct: 363 EHYTCLIDALGRAGRFVEVEALIHKMPCKD---DPIIWEVLLAACVVHHNAELGKCAAEH 419
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLS 592
+ ++P N Y++L+ +Y S GR DA + A M GV K G SWI DG F+
Sbjct: 420 LFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMV 479
Query: 593 GD 594
D
Sbjct: 480 AD 481
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 173/367 (47%), Gaps = 49/367 (13%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIA 60
+ EA +F+ +P V+WN++I G+ + G A+ + + M E + TY+ ++A
Sbjct: 7 EMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLA 66
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
+++ +V A+ +FD + V TWN+++SGY + + +F M ++V
Sbjct: 67 SCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTT 126
Query: 121 IGA-LVNCQRMDLAESYFKEMGARDVASWTI---------MVNGLV----REGRIVEARK 166
+ L +C ++ + + R V S ++ + +GLV + G+I AR
Sbjct: 127 LAVILSSCSKLGILDF------GRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARS 180
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+F+KM +DV WN +I+G + A D F++M + NG++ +
Sbjct: 181 IFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRE----------NGIMPTE----- 225
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEV 285
S + M +C + + I +G ++ H+ + K Y N+ + +I Y + G +
Sbjct: 226 -SSYASMINSCSRLSS------IPHG--RQIHAQVMKDGYDQNVYVGSALIDMYAKCGNM 276
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A F+ M +++ WN MI G +N LG++ ++ F M + PD TF +VLT C
Sbjct: 277 DDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGC 336
Query: 346 SDLPTLD 352
S +D
Sbjct: 337 SHSGLVD 343
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 132/316 (41%), Gaps = 56/316 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER--------- 50
+ A+ +FDK+ + TWN ++ GY + + + LF +M P+R
Sbjct: 74 VHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSS 133
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
DMF + ++ + + A+ +F+ M RDVV W
Sbjct: 134 CSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCW 193
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMD-------LAESYFK 138
NS+ISG + L EA F M ++ +++N C R+ + K
Sbjct: 194 NSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMK 253
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+ ++V + +++ + G + +AR FD M K++ AWN MI GY NG A +L
Sbjct: 254 DGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVEL 313
Query: 199 FQKM----HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-----CEKTWNSIISVLI 249
F+ M D ++ ++ G +S +D A+++F M + + + +I L
Sbjct: 314 FEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALG 373
Query: 250 RNGLVKEAHSYLEKYP 265
R G E + + K P
Sbjct: 374 RAGRFVEVEALIHKMP 389
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 134/322 (41%), Gaps = 70/322 (21%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + E+ A+KVFE + + + WN++I G G+ + ++ M+E+G P+ T+
Sbjct: 2 YTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTY 61
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+++L C I A+ + AR F +S +T
Sbjct: 62 SNLLASC-----------IKARDVHSARAMFDKISRPSVT-------------------- 90
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
+WN+++ G + +ELF RM+ + +PD T +LS+CS G++D GR
Sbjct: 91 ----TWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQV 146
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLI------------------------------ 488
++ L + +VD+ + G I
Sbjct: 147 HSA-SVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSL 205
Query: 489 -DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL-- 545
EA + ++R +GI + + + +++ +C ++I G +VM+ + + VY+
Sbjct: 206 NKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMK-DGYDQNVYVGS 264
Query: 546 ILTEMYLSCGRREDAKRIFAQM 567
L +MY CG +DA+ F M
Sbjct: 265 ALIDMYAKCGNMDDARLFFDTM 286
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 53/252 (21%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ +I A+++F+KM +RD V WN +I G + A F QM E + + A
Sbjct: 171 KCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYAS 230
Query: 62 LMQS---------------------------------------DNVQGAKEVFDGMEVRD 82
++ S N+ A+ FD M +++
Sbjct: 231 MINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKN 290
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAESYFK 138
+V WN MI GY NGL D+A+ +F M D V++ V+ + +D A ++F
Sbjct: 291 IVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFN 350
Query: 139 EM----GARDVAS-WTIMVNGLVREGRIVEARKLFDKMPAKDVQ-AWNLMIAGYL--DNG 190
M G +A +T +++ L R GR VE L KMP KD W +++A + N
Sbjct: 351 SMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNA 410
Query: 191 CVG--VAEDLFQ 200
+G AE LF+
Sbjct: 411 ELGKCAAEHLFR 422
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MY +C + A+ F S+P I+SWN +I G G KA+E+ M+ F+P+++T
Sbjct: 1 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
+ +L++C A V R FD + +P + ++ + + + L +
Sbjct: 61 YSNLLASCIKARDVHSARAMFDKIS-----RPSVTTWNTLLSGYCQEEQHQDTIELFRRM 115
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
+ ++ T +L +C + G ++ V L N+ V L +MY CG+
Sbjct: 116 QHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQI 175
Query: 558 EDAKRIFAQMKENGV 572
A+ IF +M E V
Sbjct: 176 GIARSIFNKMTERDV 190
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 276/487 (56%), Gaps = 17/487 (3%)
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
G++D ++N + G+ + LF MP ++V ++N++I GYL G + A+ LF
Sbjct: 93 GSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFD 152
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSII--SVLIRNG 252
+M +R++ +W +I GL A+S FK+M P+ E T S++ +R+
Sbjct: 153 EMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPD--EFTLGSVLRGCAGLRSL 210
Query: 253 LV-KEAHSYLEK--YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
L +E H+ L K + S++ +++ Y + G + K+ + M R V WN +I G
Sbjct: 211 LAGQEVHACLLKCGFELSSVVG-SSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAG 269
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
+N EE L + MK +G PD TF SVL+ CS+L TL G+QIHA+ IK +
Sbjct: 270 KAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSV 329
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
V +++I+MY+R G ++ ++ F D++ W+S+I +HG E+ALELF +M
Sbjct: 330 LAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMED 389
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+ +++TF+ +L ACS++GL ++G YFD M KY L+PR HYTCVVDLLGR G ++
Sbjct: 390 LKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLE 449
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
EA + IR+ ++ +W LL AC++H ++ E E +++L+P ++ Y++L+
Sbjct: 450 EAEGM---IRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSN 506
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNL 609
++ S + +I M++ V+KEPG SW+++ + H F GD SHP++ + L
Sbjct: 507 IHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKE 566
Query: 610 LHTEIER 616
L +E+++
Sbjct: 567 LMSELKQ 573
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 188/427 (44%), Gaps = 49/427 (11%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM 78
+D N ++ Y K G +++ LF+ MP R++ ++N +I G +Q +++ A+++FD M
Sbjct: 95 KDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEM 154
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAE 134
R++ TWN+MI+G +AL +F M L D + V+ + + +
Sbjct: 155 SERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQ 214
Query: 135 SYFKEMGARDVASWTIMVNGL----VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
+ +++ + L ++ G + + KL MP + V AWN +IAG NG
Sbjct: 215 EVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNG 274
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV--- 247
C E++ + + + ++ P+ T+ S++S
Sbjct: 275 C---PEEVLNQYNMMKMAGFR----------------------PDKI--TFVSVLSACSE 307
Query: 248 LIRNGLVKEAHSYLEKYPYSNI-ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVM 306
L G ++ H+ + K S++ A +++I Y G + +IK F DV +W+ M
Sbjct: 308 LATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSM 367
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ-----IHAQA 361
I G + GEE L+ F QM++ + TF S+L CS + G + +
Sbjct: 368 IAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYK 427
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKA 420
+K +T V + + R G ++ A S+P+ D I W +++ H AE A
Sbjct: 428 LKPRIEHYTCV----VDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMA 483
Query: 421 LELFERM 427
+ E +
Sbjct: 484 ERISEEI 490
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 33/149 (22%)
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D + F+ +L C L +L G+Q+H+ I ++ +SN ++ Y++ G +S+L+ F
Sbjct: 61 DPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLF 120
Query: 394 SSVPIHDIIS-------------------------------WNSIICGLAYHGYAEKALE 422
S++P +++S WN++I GL + ++AL
Sbjct: 121 SNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALS 180
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGL 451
LF+ M F PD+ T VL C AGL
Sbjct: 181 LFKEMYGLGFLPDEFTLGSVLRGC--AGL 207
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 49/234 (20%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
+++ + + + L MP R V WN +I G +NG + + +N M D T+
Sbjct: 240 IKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFV 299
Query: 57 TV------IAGLMQSDNVQ------GAKEV-----------------------FDGMEVR 81
+V +A L Q + GA V F E
Sbjct: 300 SVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENF 359
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMP-LKDVVSWNLVIGALVNCQRMDLAES---YF 137
DVV W+SMI+ Y +G +EAL +FH M LK + + L C L E YF
Sbjct: 360 DVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYF 419
Query: 138 KEMGAR-----DVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAG 185
M + + +T +V+ L R GR+ EA + MP + D W ++A
Sbjct: 420 DLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAA 473
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 17/167 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R+ ++++ F D V W+ MI Y +G + A+ LF+QM + M
Sbjct: 342 RSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLS 401
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVT----WNSMISGYVC-------NGLIDEALRVFHGMP 110
L+ + + G KE G E D++ I Y C G ++EA + MP
Sbjct: 402 LLYACSHSGLKE--KGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMP 459
Query: 111 LK-DVVSWNLVIGALVNCQRMDLAESYFKE---MGARDVASWTIMVN 153
++ D + W ++ A + ++AE +E + D AS+ ++ N
Sbjct: 460 VQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSN 506
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 194/651 (29%), Positives = 318/651 (48%), Gaps = 62/651 (9%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGLMQ 64
A LFD+MP +DTVTWN MI GY ++G L A M R D +T+ +++ G+
Sbjct: 55 ACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAH 114
Query: 65 SDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+ ++V G E + V ++++ Y +++A VF GMP+++ VSWN
Sbjct: 115 ACRHDLGQQVHSLIVKIGYE-QSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNA 173
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVE---------------- 163
+I V ++G RD A W +++ + +EG VE
Sbjct: 174 LIDGFV-------------QVGDRDTAFW--LLDCMQKEGVRVEDGTFAPLLTLLDGDKF 218
Query: 164 ---ARKLFDKMPAKDVQAWNLM----IAGYLDNGCVGVAEDLFQ-KMHDRDLTSWKQLIN 215
+L K+ ++ +N + + Y + G + A+ +F + RDL +W ++
Sbjct: 219 YKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLV 278
Query: 216 GLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLI---RNGLVKEAHSYLEKYPYSN 268
+ + + A + F +M E T+ +IS K H+ + K
Sbjct: 279 AYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEE 338
Query: 269 IASWTNVIVG-YFEMG--EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
+ N ++ Y ++ + +A+ +F M ++D WN ++ G + E+ LK F
Sbjct: 339 SVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGH 398
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ S D+ +++VL CSDL L LG+QIH +K + V++++I MY++CG
Sbjct: 399 MRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGI 458
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
I+ A F I+WNSI+ A HG + AL+LF MR + K D +TFV VL+A
Sbjct: 459 IEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTA 518
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
CS+ GLV+QGR M++ Y + PR HY C VDL GR G ++EA L++ + +
Sbjct: 519 CSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDSM---PFQP 575
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
+ V LLGACR NI++ +++E+EP Y+IL+ MY R +D +
Sbjct: 576 NAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHLKRWDDKASVTR 635
Query: 566 QMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
M+E VKK PG SWI++ + H F + D SHP + +L L E++R
Sbjct: 636 LMRERKVKKVPGWSWIEVKNEVHAFKAEDRSHPYSEDVYQILGELMEEMKR 686
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 16/263 (6%)
Query: 267 SNIASWTNVIVGYFEM--GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
S+I N++ Y + G++ A K+F+ M +D WN MI G E+ +F
Sbjct: 32 SHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLK 91
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
MK G D TF S+L + DLG+Q+H+ +KI Q +A++ MYA+C
Sbjct: 92 SMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCE 151
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
++ A F +P+ + +SWN++I G G + A L + M+ + +D TF +L+
Sbjct: 152 RVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLT 211
Query: 445 ACSYAGLVDQGRYY-----FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
L+D ++Y C K+ L+ +A + GL+++A + +
Sbjct: 212 ------LLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFD--G 263
Query: 500 ADGIEVSPTVWGALLGACRIHNN 522
A G W ++L A +H+
Sbjct: 264 AVGTR-DLVTWNSMLVAYLVHDK 285
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 19/180 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYN 56
+ N ++ A NLF M +D V+WN ++ G+ + GF ++A+ LF M E D + Y+
Sbjct: 353 LNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYS 412
Query: 57 TVIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
V+ +Q +++ G + D V +S+I Y G+I++A + F
Sbjct: 413 AVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVA-SSLIFMYSKCGIIEDAWKCFEDTTK 471
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVN-----GLVREGRIV 162
+ ++WN ++ A + D+A F M R+V ++ ++ GLV +GR V
Sbjct: 472 ESSITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCV 531
>gi|302761102|ref|XP_002963973.1| hypothetical protein SELMODRAFT_81279 [Selaginella moellendorffii]
gi|300167702|gb|EFJ34306.1| hypothetical protein SELMODRAFT_81279 [Selaginella moellendorffii]
Length = 640
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 286/582 (49%), Gaps = 27/582 (4%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER---DMFTYNTV 58
R ++++ +FD ++ +W M+ Y NG LD A F MP++ D N +
Sbjct: 58 RCGSAEDSRWVFDATRAKNAHSWVSMLAAYAHNGHLDEAKRFFAAMPDKNRSDPVACNIL 117
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
I Q + AK +FD R VV++N++I + +G + A +FH MP + +VSWN
Sbjct: 118 IGVHSQCGEIGEAKRLFDQAPDRTVVSYNTLIQAFARSGHLIYAKWMFHSMPERSIVSWN 177
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+I A + + F R+V SW M+ G + +A LF M + V +
Sbjct: 178 SIISACGEHGLVQETKEIFDRAPQRNVISWNAMIQAYSSSGHLGDASALFQTMRERSVIS 237
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
W +MI GY +G + A F +M +R + +W +I+ S+ + AA F MPE
Sbjct: 238 WTVMIVGYAHSGELESASAAFDRMPERGVAAWNAIISAHGQSKNLTAAERLFDSMPERST 297
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
+WN+++ +L +G + A + P ++ SW + + E+G+V A+ +F M
Sbjct: 298 VSWNAMLQLLADSGEIDRAKELFARVPRRDVISWNTAVKLHAELGDVDGAMGLFHKMPQW 357
Query: 299 DVTVWNVMIFGLGE--------NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+ WN++ G + + G++ + M + S T++LT+ +
Sbjct: 358 NSISWNILFHACGSVEESKHLYDTMPVHGIESWTTMLSTSVSE-----TTILTVLAHNGH 412
Query: 351 LDLGRQ-IHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
L R+ H+ A + T V+ AM+ YA+ G+++ A F S+P +SWN+++
Sbjct: 413 LSAARECFHSMA------ETTIVAQTAMLAAYAQNGHVKEAKELFDSMPRTSFVSWNAMV 466
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
A +G+ +ALELF M L +PD++TF +L A S+ G+ D+G YF M Y +
Sbjct: 467 TAYAQNGHPREALELFHSMVLHGERPDEMTFSSILLASSHNGMADRGWSYFASMVPDYCV 526
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
+P H+ C+VD GR G + EAM L + E VW +LLGACR +++ G
Sbjct: 527 RPVRDHFYCMVDAFGRAGRLAEAMELAERM---PFEADVVVWRSLLGACRTSRDVETGAF 583
Query: 529 AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
++ E +P +S Y IL MY + G +++ ++ M++N
Sbjct: 584 VAHKLFEADPGDSVAYTILAGMYATAGMKDEEAKVMKLMEQN 625
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 195/625 (31%), Positives = 322/625 (51%), Gaps = 36/625 (5%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+I A LFD++ Q+D V WNVM+ GY K G D+ + F+ M D + N V +
Sbjct: 183 GKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLM-RMDQISPNAVTFDCV 241
Query: 64 QSDNVQGAKEVFD-GMEVRDVVTW----------NSMISGYVCNGLIDEALRVFHGMPLK 112
S V +K + D G+++ +V NS++S Y G D+A+++F M
Sbjct: 242 LS--VCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRA 299
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
D V+WN +I V M+ + +F EM + V I + L+ E + ++
Sbjct: 300 DTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIH 359
Query: 173 --------AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING-LVNSRRI 223
+ D+ + +I Y V +A+ +F + + D+ + +I+G L N I
Sbjct: 360 CYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNI 419
Query: 224 DAAISYFKQMPETC----EKTWNSIISV---LIRNGLVKEAHSYLEKYPYSNIASW-TNV 275
DA + F+ + + E T SI+ V L+ L +E H ++ K + N + V
Sbjct: 420 DA-LEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAV 478
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
I Y + G + A ++F ++ RD+ WN MI ++D + F QM SG D
Sbjct: 479 IDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDC 538
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
+ ++ L+ C++LP+ G+ IH IK + + +I MYA+CGN+++A+ F +
Sbjct: 539 VSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDT 598
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSACSYAGLVDQ 454
+ +I+SWNSII HG + +L LF M + +PD ITF+ ++S C + G VD+
Sbjct: 599 MKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDE 658
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
G +F M Y +QP+ HY CVVDL GR G + EA +++ VWG LL
Sbjct: 659 GVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEA---YETVKSMPFPPDAGVWGTLL 715
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
GA R+H N+++ ++A R+M+L+P NSG Y++++ + + G E ++ + MKE V+K
Sbjct: 716 GASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQK 775
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPK 599
PG SWI+IN H+F+SGD +HP+
Sbjct: 776 IPGYSWIEINKITHLFVSGDVNHPE 800
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 136/573 (23%), Positives = 231/573 (40%), Gaps = 93/573 (16%)
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
WNS+IS +V GL+++AL + M DV ++ ++ A V + E +
Sbjct: 102 WNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVS 161
Query: 142 ARDVASWTIMVNGLVRE----GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG------- 190
+ + + + L++ G+I A KLFD++ KD WN+M+ GY G
Sbjct: 162 SLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIK 221
Query: 191 ------------------CV------GVAEDLFQKMHDRDLTSWKQLINGLVNSR----- 221
CV + DL ++H + S + NS
Sbjct: 222 GFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYS 281
Query: 222 ---RIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA--------------------- 257
R D AI F+ M TWN +IS +++GL++E+
Sbjct: 282 KCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSS 341
Query: 258 -----------------HSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
H Y+ ++ S +I + +I YF+ V A K+F + D
Sbjct: 342 LLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVD 401
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
V V+ MI G N L + L+ F + + SP+ T S+L + L L LGR++H
Sbjct: 402 VVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHG 461
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
IK + + A+I MYA+CG + A F + DI+SWNS+I A
Sbjct: 462 FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSA 521
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A+++F +M ++ D ++ LSAC+ G+ M K+ L + ++
Sbjct: 522 AIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMI-KHSLALDVYSESTLI 580
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
D+ + G + AMN+ + ++ I W +++ A H +K ++E N
Sbjct: 581 DMYAKCGNLKAAMNVFDTMKEKNI----VSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGN 636
Query: 540 NSGVYLILTEMYLSC--GRREDAKRIFAQMKEN 570
L + L C G ++ R F M ++
Sbjct: 637 RPDQITFLEIISLCCHVGDVDEGVRFFRSMTQD 669
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 198/473 (41%), Gaps = 70/473 (14%)
Query: 155 LVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR--DLTSWKQ 212
L+R+G+ V A + +++ + D ++ Y G +F ++ R + W
Sbjct: 46 LLRQGKQVHAFVIVNRI-SGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNS 104
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW 272
+I+ V ++ A++++ +M S L++ + + +E + ++S
Sbjct: 105 IISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIE-FLSDTVSSL 163
Query: 273 ---------TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
+++I Y E G++ A K+F+ + +D +WNVM+ G + + +K F
Sbjct: 164 GMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGF 223
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
M+ SP+ TF VL++C+ +DLG Q+H + + ++ N++++MY++C
Sbjct: 224 SLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKC 283
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G A+ F + D ++WN +I G G E++L F M + PD ITF +L
Sbjct: 284 GRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLL 343
Query: 444 SACS--------------------------YAGLVDQGRYYFDC----MKNKYFLQPRSA 473
+ S + L+D YF C M K F Q S
Sbjct: 344 PSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDA---YFKCRGVSMAQKIFSQCNSV 400
Query: 474 HYTCVVDLLGRF---GLIDEAMNLL----------NEIRADGIEVSPTVWGALLGACRIH 520
++ + GL +A+ + NEI + + P + G L
Sbjct: 401 DVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITL--VSILPVIGGLL------- 451
Query: 521 NNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+K+G E+ G + + N + + +MY CGR A IF ++ + +
Sbjct: 452 -ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDI 503
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 115/293 (39%), Gaps = 46/293 (15%)
Query: 321 KFFVQMKESGPSPDNATF---------TSVLTICSDLPTLDLGRQIHAQAI--KIARNQF 369
K FV K+S P ++ F + +L CS+L L G+Q+HA I +I+ + +
Sbjct: 8 KRFVPYKKSLPLRNSYRFLEETLPRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSY 67
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVP--IHDIISWNSIICGLAYHGYAEKALELFERM 427
T ++ MYA CG+ + F + + I WNSII G +AL + +M
Sbjct: 68 T--DERILGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKM 125
Query: 428 RLTDFKPDDITFVGVLSAC----SYAGL-----------VDQGRYYFDCMKNKYF----- 467
PD TF ++ AC ++ G+ +D + + Y
Sbjct: 126 LCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKI 185
Query: 468 ----------LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
LQ + +++ + G D + + +R D I + + +L C
Sbjct: 186 DVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVC 245
Query: 518 RIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
I +G ++ G V+ + L MY CGR +DA ++F M
Sbjct: 246 ASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSR 298
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 317/638 (49%), Gaps = 55/638 (8%)
Query: 6 IQEAQNLFDKMPQR---DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTV 58
+ +AQ +F+ P + + WN ++R +G+ + A+ ++ +M + D FT+ V
Sbjct: 82 VSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLV 141
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWN-----SMISGYVCNGLIDEALRVFHGMPLKD 113
I + + + V G V WN ++ Y G +D+A +VF M ++
Sbjct: 142 IRACALMGSRKLCRSV-HGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRS 200
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLFD 169
VSWN ++ A F+ MG+ ++ +WT +++ R G+ VE +LF
Sbjct: 201 CVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFG 260
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ--LINGLVNSRRIDAAI 227
+M + + A +A L V V DL ++ + +I+G V
Sbjct: 261 RMRMRGIGATAEALAVVLS---VSV-----------DLAAFDEGKVIHGYV--------- 297
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGS 287
K E NS+I + ++G V A + NI SW +I Y ++G
Sbjct: 298 --VKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDE 355
Query: 288 AIKVFELMTTRD--------VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
A +F + D V W+ +I G GEE L+ F +M+ + ++ T
Sbjct: 356 AFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIA 415
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
SVL++C++L L LGR+IH ++ + V N +I MY + G+ + L F +
Sbjct: 416 SVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENK 475
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
D+ISWN+++ G HG E A+ F++M F+PD +TFV VLSACS+AGLV +GR F
Sbjct: 476 DLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELF 535
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
D M ++ ++P+ HY C+VDLLGR GL+ EA + +++ +E + VWGALL +CR+
Sbjct: 536 DKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKV---VKSMPVEPNACVWGALLNSCRM 592
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
H N +V E ++ L +G Y++L+ +Y + GR ED+ ++ K G+KK PG S
Sbjct: 593 HKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQS 652
Query: 580 WIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
WIQ+ ++F +G++ H + + +L L ++E E
Sbjct: 653 WIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVE 690
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 191/445 (42%), Gaps = 53/445 (11%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
R+ +A+ +F++M R V+WN M+ GY N A +F M AGL
Sbjct: 184 GRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGS----------AGLE 233
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNL 119
++VTW S++S + G E + +F M ++ + + +
Sbjct: 234 P-----------------NLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAV 276
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKD 175
V+ V+ D + + ++ + N L+ + G + AR LF ++ K+
Sbjct: 277 VLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKN 336
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRD--------LTSWKQLINGLVNSRRIDAAI 227
+ +WN +I+ Y D G A +F ++ D + SW +I G + + + A+
Sbjct: 337 IVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEAL 396
Query: 228 SYFKQMPETCEK----TWNSIISV---LIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGY 279
F++M K T S++SV L L +E H ++ + NI +I Y
Sbjct: 397 ELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMY 456
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G VFE + +D+ WN M+ G G + LGE ++ F QM + G PD TF
Sbjct: 457 TKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFV 516
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA-MITMYARCGNIQSALLEFSSVPI 398
+VL+ CS + GR++ + IK R + A M+ + R G +Q A S+P+
Sbjct: 517 AVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPV 576
Query: 399 H-DIISWNSIICGLAYHGYAEKALE 422
+ W +++ H E A E
Sbjct: 577 EPNACVWGALLNSCRMHKNTEVAEE 601
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 127/299 (42%), Gaps = 7/299 (2%)
Query: 275 VIVGYFEMGEVGSAIKVFELMTTR---DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
V+ Y G V A +VFE+ ++ +WN ++ + EE L+ + +M++ G
Sbjct: 72 VVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGV 131
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
S D TF V+ C+ + + L R +H +++ V N ++ MY + G + A
Sbjct: 132 SADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARK 191
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F + + +SWN+++ G A + A E+F M +P+ +T+ +LS+ + G
Sbjct: 192 VFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQ 251
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
+ F M+ + A V+ + DE + + G E V
Sbjct: 252 HVETMELFGRMRMRGIGATAEA-LAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKN 310
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
+L+ H N+ I +E++ N + L Y G ++A IF Q+++
Sbjct: 311 SLICLYGKHGNVNAARIL---FLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKT 366
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 333 PDNAT---FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
P+N F +L CS L +QIH+Q I ++ ++ ++++YA G + A
Sbjct: 29 PNNDVLDFFNDLLQQCSKS---HLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDA 85
Query: 390 LLEFSSVPIH---DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
F PI +++ WNSI+ HGY E+ALE++ RMR D TF V+ AC
Sbjct: 86 QRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRAC 145
Query: 447 SYAG 450
+ G
Sbjct: 146 ALMG 149
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 18/141 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
++ +E +F+K+ +D ++WN M+ GY +G +NA+ F+QM E D T+
Sbjct: 458 KSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVA 517
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
V++ + V +E+FD M +++ M Y C GL+ EA +V MP
Sbjct: 518 VLSACSHAGLVAEGRELFDKM-IKEFRVEPQM-EHYACMVDLLGRAGLLQEASKVVKSMP 575
Query: 111 LK-DVVSWNLVIGALVNCQRM 130
++ + W GAL+N RM
Sbjct: 576 VEPNACVW----GALLNSCRM 592
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 190/632 (30%), Positives = 301/632 (47%), Gaps = 87/632 (13%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVI 59
R+ A+ F+ M RD V+WN +I GY + G L+ + LF +M E + T+N +I
Sbjct: 234 GRLSCARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILI 293
Query: 60 AGLMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
QS A E+ ME V DV TW SMISG+ N +AL +F M L +
Sbjct: 294 NSYSQSGKCDDAMELMKKMESFRIVPDVFTWTSMISGFAQNNRRSQALELFREMLLAGIE 353
Query: 116 SWNLVIGALVNC--------QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
+ + + ++ + M+L K D+ +++ + G + +AR++
Sbjct: 354 PNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRV 413
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRD----LTSWKQLINGLVNSRRI 223
FD + KDV WN MI GY G G A DLF KMH+ D + +W +I+G + +
Sbjct: 414 FDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGDE 473
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMG 283
D A+ F +M ++GL+K + ASW ++I GY + G
Sbjct: 474 DQAMDLFHRME---------------KDGLIKR-----------DTASWNSLIAGYLQNG 507
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
A+ +F QM+ P++ T S+L
Sbjct: 508 HKNKALGIFR-------------------------------QMQSFCIRPNSVTMLSILP 536
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
C++L ++IH ++ +V+N +I YA+ GNI A F + DIIS
Sbjct: 537 ACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQGISSKDIIS 596
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
WNS+I G HG ++ AL+LF++M KP TF+ ++ A S +G+VD+G+ F M
Sbjct: 597 WNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMM 656
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
Y + P H++ ++DLLGR G + EA+ + ++ IE +W ALL A +IH NI
Sbjct: 657 EDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDM---AIEPDSCIWAALLTASKIHGNI 713
Query: 524 KVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQI 583
+ AGE ++ELEP+N ++ + +MY G+ ED ++ K + K+ GCSWI+
Sbjct: 714 GLAIRAGECLLELEPSNFSIHQQILQMYALSGKFEDVSKLRKSEKRSETKQPLGCSWIEA 773
Query: 584 NDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+ H F++ D S P F + LH+ IE
Sbjct: 774 KNIVHTFVADDRSRPYF-------DFLHSWIE 798
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 164/323 (50%), Gaps = 31/323 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERD----MFTYNT 57
++ +++A+ +FD + ++D TWN MI GY + G+ A LF +M E D + T+N
Sbjct: 403 KSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNA 462
Query: 58 VIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
+I+G +Q+ + A ++F DG+ RD +WNS+I+GY+ NG ++AL +F M
Sbjct: 463 MISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSF 522
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGA----RDVASWTIMVNGLV----REGRIVEA 164
+ ++ + +++ +A KE+ R++ S + N L+ + G IV A
Sbjct: 523 CIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYA 582
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNS 220
+ +F + +KD+ +WN +IAGY+ +GC A DLF +M + ++ +I S
Sbjct: 583 QTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLS 642
Query: 221 RRIDAAISYFKQMPETCE-----KTWNSIISVLIRNGLVKEAHSYLEKY---PYSNIASW 272
+D F M E + + +++I +L R+G + EA ++E P S I W
Sbjct: 643 GMVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCI--W 700
Query: 273 TNVIVGYFEMGEVGSAIKVFELM 295
++ G +G AI+ E +
Sbjct: 701 AALLTASKIHGNIGLAIRAGECL 723
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 148/323 (45%), Gaps = 26/323 (8%)
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
R GL++E + ++E T ++ Y + G +G A KVF M R++ W+ MI
Sbjct: 110 RIGLLEEMNPFVE----------TKLVSMYAKCGSLGEARKVFGEMRERNLYAWSAMIGA 159
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
+ E ++ F M E G PD +L C + + G+ IH+ I+ N
Sbjct: 160 YSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFN 219
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
VSN+++ +YA+CG + A F ++ D +SWNSII G G EK+ +LFE+M+
Sbjct: 220 IRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQE 279
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+P +T+ ++++ S +G D M++ + + P +T ++ +
Sbjct: 280 EGIEPGLVTWNILINSYSQSGKCDDAMELMKKMES-FRIVPDVFTWTSMISGFAQNNRRS 338
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI--- 546
+A+ L E+ GIE + + + AC +K G MEL + +
Sbjct: 339 QALELFREMLLAGIEPNGVTVTSGISACASLKALKKG-------MELHSVAVKIGCVEDL 391
Query: 547 -----LTEMYLSCGRREDAKRIF 564
L +MY G EDA+R+F
Sbjct: 392 LVGNSLIDMYSKSGELEDARRVF 414
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
+ + G + T+ +L C D + +LGR++HA+ I + V +++MYA+CG+
Sbjct: 76 IAQGGSNVKPNTYMQLLQSCIDQGSAELGRKLHAR-IGLLEEMNPFVETKLVSMYAKCGS 134
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+ A F + ++ +W+++I + + ++ F M PD+ +L A
Sbjct: 135 LGEARKVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQA 194
Query: 446 CSYAGLVDQGR 456
C G + G+
Sbjct: 195 CGNCGDAETGK 205
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%)
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
L + G + +A+ L+ I G V P + LL +C + ++G R+ LE N
Sbjct: 60 LCKNGRLADAIACLDAIAQGGSNVKPNTYMQLLQSCIDQGSAELGRKLHARIGLLEEMNP 119
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKE 569
V L MY CG +A+++F +M+E
Sbjct: 120 FVETKLVSMYAKCGSLGEARKVFGEMRE 147
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/481 (32%), Positives = 274/481 (56%), Gaps = 16/481 (3%)
Query: 148 WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL 207
W ++ + G +V+ARK+FD+MP +DV +WN+M+ GY + G + A +LF +M +RD
Sbjct: 125 WNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDS 184
Query: 208 TSWKQLINGLVNSRRIDAAI---SYFKQMPETCEKTWNSIISV-------LIRNGLVKEA 257
SW ++ G V + + A+ S +++P + + +V IR G KE
Sbjct: 185 YSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRG--KEI 242
Query: 258 HSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
H ++ + S+ W++++ Y + G + A +F+ + +DV W MI ++
Sbjct: 243 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRW 302
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
EG F ++ S P+ TF+ VL C+DL T +LGRQ+H ++ + ++ S+++
Sbjct: 303 REGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSL 362
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
I MY +CGNI+SA P D++S S+I G A +G ++AL+ F+ + + KPD
Sbjct: 363 IDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDH 422
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
+TFV VLSAC++AGLV++G +F + K+ L S HYTC+VDLL R G ++ ++L+
Sbjct: 423 VTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLS 482
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
E+ ++ S +W ++LG C + NI + E A + + ++EP N Y+ + +Y + G+
Sbjct: 483 EM---PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGK 539
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
E+ ++ +M+E G+ K+PG SW +I HVF++ D+SHP ++++ L L +++
Sbjct: 540 WEEEGKMRKRMQEIGITKKPGSSWTEIKRKRHVFIAADTSHPMYNQIIEFLGELRKKMKE 599
Query: 617 E 617
E
Sbjct: 600 E 600
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 212/479 (44%), Gaps = 75/479 (15%)
Query: 36 FLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME----VRDVVTWNSMIS 91
L A+ L + + TY +I Q+ ++ K+V + + V +V WN ++
Sbjct: 71 LLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILG 130
Query: 92 GYV-CNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTI 150
Y C L+D A +VF MP +DV SWN+++ ++ A + F EM RD SWT
Sbjct: 131 MYAKCGSLVD-ARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTA 189
Query: 151 MVNGLVREGRIVEARKLFDKMP---------------------------AKDVQA----- 178
MV G V++ + EA L+ M K++
Sbjct: 190 MVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRA 249
Query: 179 --------WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
W+ ++ Y GC+ A ++F K+ D+D+ SW +I+ S R S F
Sbjct: 250 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLF 309
Query: 231 KQMPETCEK----TWNSIISV---LIRNGLVKEAHSYLEKY---PYSNIASWTNVIVGYF 280
++ +CE+ T++ +++ L L ++ H Y+ + PYS +S ++I Y
Sbjct: 310 SELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASS--SLIDMYT 367
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G + SA V + D+ +I G +N +E LK+F + +SG PD+ TF +
Sbjct: 368 KCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVN 427
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN---AMITMYARCGNIQSALLEFSSVP 397
VL+ C+ ++ G + + ++ T S+ ++ + AR G + S +P
Sbjct: 428 VLSACTHAGLVEKGLEFFYSITE--KHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMP 485
Query: 398 IH-DIISWNSIICGLAYHG----YAEKALELFERMRLTDFKPDD-ITFVGVLSACSYAG 450
+ W S++ G + +G E A ELF+ +P++ +T+V + + + AG
Sbjct: 486 MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK------IEPENPVTYVTMANIYAAAG 538
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 158/365 (43%), Gaps = 48/365 (13%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVIA 60
++EA+NLFD+MP+RD+ +W M+ GY K + A+ L++ M + ++FT ++ +A
Sbjct: 169 LEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVA 228
Query: 61 GLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
++ KE+ G VR D V W+S++ Y G IDEA +F + KDVV
Sbjct: 229 AAAAIKCIRRGKEIH-GHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVV 287
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE---------GRIVEA-- 164
SW +I R S F E+ +G++ GR V
Sbjct: 288 SWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYM 347
Query: 165 -RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
R FD A + +I Y G + A + DL S LI G + +
Sbjct: 348 TRVGFDPYSF----ASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKP 403
Query: 224 DAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEA----HSYLEKYPYSNIASWTNV 275
D A+ YF + ++ K T+ +++S GLV++ +S EK+ ++ +
Sbjct: 404 DEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTC 463
Query: 276 IV------GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL---GENDLGEEGLKFFVQM 326
+V G FE ++ S + + ++ +W ++ G G DL EE + ++
Sbjct: 464 LVDLLARSGRFE--QLKSVLSEMPMKPSK--FLWASVLGGCSTYGNIDLAEEAAQELFKI 519
Query: 327 KESGP 331
+ P
Sbjct: 520 EPENP 524
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 33/215 (15%)
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
G++ L+ VQ+ P +T+ +++ +CS L+ G+++H + N
Sbjct: 68 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 127
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-------- 427
++ MYA+CG++ A F +P D+ SWN ++ G A G E+A LF+ M
Sbjct: 128 ILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSW 187
Query: 428 ------------------------RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
R+ + KP+ T ++A + + +G+ +
Sbjct: 188 TAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIV 247
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
+ L ++ ++D+ G+ G IDEA N+ ++I
Sbjct: 248 -RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI 281
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
I+ A+++ D P+ D V+ +I GY +NG D A+ F+ + + D T+ V++
Sbjct: 372 IESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSA 431
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLK-D 113
+ V+ E F + + +T S Y C +G ++ V MP+K
Sbjct: 432 CTHAGLVEKGLEFFYSITEKHDLTHTS--DHYTCLVDLLARSGRFEQLKSVLSEMPMKPS 489
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM---GARDVASWTIMVNGLVREGRIVEARKLFDK 170
W V+G +DLAE +E+ + ++ M N G+ E K+ +
Sbjct: 490 KFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKR 549
Query: 171 M 171
M
Sbjct: 550 M 550
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/543 (30%), Positives = 280/543 (51%), Gaps = 53/543 (9%)
Query: 99 IDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE 158
+D A + + + K + + +L +G L++ + A + + R +++ +
Sbjct: 10 LDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANR-------LIDFYSKC 62
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
I A K+F +P K+ +WN++I+ Y +G A +L +M +L S+ LI+GL
Sbjct: 63 DSIQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLG 122
Query: 219 NSRRIDAAISYFKQMPETC------EKTWNSII--------------------------S 246
+ +++ FK M + C E T S++ +
Sbjct: 123 HHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSN 182
Query: 247 VLIRNGLVKE---------AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
++I N L+ + S + P ++ SWT+++ Y + + A +F M
Sbjct: 183 IIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQE 242
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
++ W +I G +N G+E L F QM+E G P TF SVL+ C+DL + G++I
Sbjct: 243 KNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEI 302
Query: 358 HAQAIKIARNQFTT---VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
H I+ + + NA+I MY +CG ++SA F + DI+SWNS+I G A +
Sbjct: 303 HGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQN 362
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
G+ E++L +FERM D +P+ +TF+G+LSAC + GLV +G D M+ Y + PRS H
Sbjct: 363 GHGEESLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDH 422
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM 534
Y ++DLLGR ++EAM L+ RA +WGALLGACRIH N+ + A E +
Sbjct: 423 YAIMIDLLGRNNRLEEAMGLIK--RAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLF 480
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
+LEP N+ Y+++ +Y + R ++A+++ M E G++KE CSWI++ + H F++ +
Sbjct: 481 QLEPGNAARYVMVYNIYAAASRWDEARQVRRLMMERGLRKEAACSWIEVRNTRHQFVAKE 540
Query: 595 SSH 597
SH
Sbjct: 541 RSH 543
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 172/367 (46%), Gaps = 40/367 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
IQ A +F +P ++T +WN++I Y ++G + A L +QMP+ ++ +YN++I+GL
Sbjct: 65 IQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHH 124
Query: 66 DNVQGAKEVFDGMEVR------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+ + VF M + D T S++ G E LR HG + ++ N+
Sbjct: 125 GFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLG-APELLRQVHGAAIIIGLNSNI 183
Query: 120 VIG-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
+IG AL++ C D++ S F M RDV SWT MV + R+ +A LF +M K
Sbjct: 184 IIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEK 243
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
+ +W +IAG+ NG A LF++M + I + F +
Sbjct: 244 NTVSWTALIAGFAQNGRGDEALHLFEQMREEG----------------IPPSAFTFASVL 287
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEKYP----YSNIASWTNVIVGYFEMGEVGSAIK 290
C LI G KE H ++ + + NI +I Y + G++ SA
Sbjct: 288 SACADL------ALIARG--KEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATT 339
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+F+ M +D+ WN +I G +N GEE L F +M E+ P++ TF +L+ C
Sbjct: 340 LFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSACCHTGL 399
Query: 351 LDLGRQI 357
+ G +I
Sbjct: 400 VSEGLRI 406
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 133/267 (49%), Gaps = 22/267 (8%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
+ + N +I Y K G D + +F++MPERD+ ++ +++A Q+ ++ A +F M+
Sbjct: 182 NIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQ 241
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDLAESYFK 138
++ V+W ++I+G+ NG DEAL +F M + + ++++ C + L + K
Sbjct: 242 EKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALI-ARGK 300
Query: 139 EMGARDVASWTI-------MVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
E+ + S I ++N L+ + G++ A LF M KD+ +WN +I G+
Sbjct: 301 EIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFA 360
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS---- 243
NG + +F++M + D+ GL+++ +S ++ ++ EK +
Sbjct: 361 QNGHGEESLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRS 420
Query: 244 -----IISVLIRNGLVKEAHSYLEKYP 265
+I +L RN ++EA +++ P
Sbjct: 421 DHYAIMIDLLGRNNRLEEAMGLIKRAP 447
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 57/254 (22%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------------- 50
+R+++A LF +M +++TV+W +I G+ +NG D A+ LF QM E
Sbjct: 228 SRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVL 287
Query: 51 -----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
++F N +I + ++ A +F GM +
Sbjct: 288 SACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEK 347
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNC-------QRMDLA 133
D+V+WNS+I+G+ NG +E+L VF M D+ ++ +G L C + + +
Sbjct: 348 DIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRIL 407
Query: 134 ESYFKEMGARDVAS-WTIMVNGLVREGRIVEARKLFDKMP--AKDVQAWNLMIAGYLDNG 190
+S K+ G + + IM++ L R R+ EA L + P + V W ++ +G
Sbjct: 408 DSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHG 467
Query: 191 CVGV----AEDLFQ 200
+ + AE LFQ
Sbjct: 468 NMDLARRAAEVLFQ 481
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 120/282 (42%), Gaps = 51/282 (18%)
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
S P + ++S+++ C L LG+ +H+ IK A T ++N +I Y++C +IQS
Sbjct: 8 SSLDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQS 67
Query: 389 ALLEFSSVPIHDIISW-------------------------------NSIICGLAYHGYA 417
A F +P+ + SW NS+I GL +HG+
Sbjct: 68 AHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFR 127
Query: 418 EKALELFERM--RLTDFKPDDITFVGVLSACSYAGLVD-----QGRYYFDCMKNKYFLQP 470
+++L +F+ M + ++ D+ T V ++ +C+ G + G + + +
Sbjct: 128 KESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIG- 186
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
++D G+ G D + ++ + + + ++ A A R+ E A
Sbjct: 187 -----NALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRL-------EDAH 234
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+++ N+ + L + GR ++A +F QM+E G+
Sbjct: 235 WLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGI 276
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 204/645 (31%), Positives = 332/645 (51%), Gaps = 78/645 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNT 57
++A I +A+ LFD + + + TW +I GY K G ++ LF+QM E D + ++
Sbjct: 188 KHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSS 247
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYV-----CNGLIDEALRVFHGMPLK 112
V++ + ++G K++ + +V SM++G++ C+ + ++F M K
Sbjct: 248 VLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHK-VQLGRKLFDRMVDK 306
Query: 113 DVVSWNLVI-GALVNCQRMDLAESYFKEMG--------------------------ARDV 145
+VVSW VI G + N D A F EM R V
Sbjct: 307 NVVSWTTVIAGCMQNSFHRD-ALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQV 365
Query: 146 ASWTIMVN----GLVREGRI---------VEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
++ I VN V+ G I +ARK+F+ M A D+ ++N MI GY +
Sbjct: 366 HAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKL 425
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A DLF++M L+S LI V+ + A++ + + N I ++I+ G
Sbjct: 426 CEALDLFREMR-LSLSSPTLLI--FVSLLGVSASLYHLE--------LSNQIHGLIIKYG 474
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+ L+++ S + I Y + VG A VFE + +D+ VW M G +
Sbjct: 475 VS------LDEFAGSAL------IDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQ 522
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
EE LK + ++ S P+ TF +V+T S++ +L G+Q H Q IK+ + V
Sbjct: 523 QSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFV 582
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+N ++ MYA+ G+I+ A F S D WNS+I A HG AEKAL++FE M +
Sbjct: 583 ANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGL 642
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
KP+ +TFVGVLSACS+ GL+D G +FD M +++ ++P HY C+V LLGR G + EA
Sbjct: 643 KPNYVTFVGVLSACSHTGLLDLGFDHFDSM-SQFGIEPGIEHYVCMVSLLGRAGKLYEAK 701
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
+ ++ I+ + VW +LL ACR+ N+++G A E + P +SG Y++L+ ++
Sbjct: 702 EFIEKM---PIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFA 758
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
S G + +R+ +M +GV KEPGCSWI++N+ H F++ D++H
Sbjct: 759 SKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAKDTAH 803
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 226/516 (43%), Gaps = 36/516 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVIA 60
+ A LFD M ++ VTW+ M+ Y + A+ LF Q + + + +V+
Sbjct: 90 VNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVR 149
Query: 61 GLMQSDNVQGAKE----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
Q + A + V G V+DV S+I Y + ID+A +F G+ +K +
Sbjct: 150 ACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFT 209
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGA----------RDVASWTIMVNGLVREGRIVEARK 166
W +I R ++ F +M V S +M+ L G+ +
Sbjct: 210 WTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFL-EGGKQIHCYV 268
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
L + DV N I Y V + LF +M D+++ SW +I G + + A
Sbjct: 269 LRSGI-VMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDA 327
Query: 227 ISYFKQM------PET--CEKTWNSIIS-VLIRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
+ F +M P+ C NS S V + G ++ H+Y K N N ++
Sbjct: 328 LDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKG--RQVHAYAIKVNIDNDDFVKNGLI 385
Query: 278 G-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + + A KVF LM D+ +N MI G D E L F +M+ S SP
Sbjct: 386 DMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLL 445
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
F S+L + + L L+L QIH IK + +A+I +Y++C + A L F +
Sbjct: 446 IFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEI 505
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
DI+ W ++ G E++L+L++ ++++ KP++ TF V++A S + G+
Sbjct: 506 QDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQ 565
Query: 457 YYFD-CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
+ + +K + P A+ +VD+ + G I+EA
Sbjct: 566 QFHNQVIKMGFDDDPFVAN--TLVDMYAKSGSIEEA 599
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 191/406 (47%), Gaps = 36/406 (8%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-- 106
+ D+F NT++ + + V A ++FD M +++VTW+SM+S Y + EAL +F
Sbjct: 71 KHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQ 130
Query: 107 -----HGMP----LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR 157
+ P L VV G L + + K +DV T +++ +
Sbjct: 131 FMRSCNEKPNEYILASVVRACTQFGGLN--PALQIHGLVVKGGYVQDVYVCTSLIDFYTK 188
Query: 158 EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL 217
I +AR LFD + K W +IAGY G V+ LF +M + + K +++ +
Sbjct: 189 HACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSV 248
Query: 218 VNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
+++ + + KQ I ++R+G+V + ++ I
Sbjct: 249 LSACLMLKFLEGGKQ-----------IHCYVLRSGIVMD------------VSMVNGFID 285
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
YF+ +V K+F+ M ++V W +I G +N + L FV+M G +PD
Sbjct: 286 FYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFG 345
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
TSVL C L L+ GRQ+HA AIK+ + V N +I MYA+C ++ A F+ +
Sbjct: 346 CTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMA 405
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
D++S+N++I G + +AL+LF MRL+ P + FV +L
Sbjct: 406 AIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLL 451
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 128/291 (43%), Gaps = 9/291 (3%)
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
D+ N ++ Y V A LF M ++L +W +++ + A+ F Q
Sbjct: 73 DIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFM 132
Query: 235 ETC-EKTWNSIISVLIR-----NGL--VKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEV 285
+C EK I++ ++R GL + H + K Y ++ T++I Y + +
Sbjct: 133 RSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACI 192
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A +F+ + + W +I G + + LK F QMKE PD +SVL+ C
Sbjct: 193 DDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSAC 252
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
L L+ G+QIH ++ ++ N I Y +C +Q F + +++SW
Sbjct: 253 LMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWT 312
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
++I G + + AL+LF M + PD VL++C +++GR
Sbjct: 313 TVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGR 363
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 187/677 (27%), Positives = 326/677 (48%), Gaps = 85/677 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ R E+ +F +P++++V+W+ +I G +N L A+ F +M + + ++ A
Sbjct: 227 KGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYAS 286
Query: 62 LMQS---------------------------------------DNVQGAKEVFDGMEVRD 82
+++S DN+Q A+ +FD E +
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 346
Query: 83 VVTWNSMISGYVCNGLIDEALRVFH-----GMPLKDVV------SWNLVIGALVNCQRMD 131
++N+MI+GY +AL +FH G+ ++ + LV G Q
Sbjct: 347 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 406
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
LA K + DV ++ + + EA ++FD+M +D +WN +IA + NG
Sbjct: 407 LA---IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN--------S 243
LF M R + G + ++ Y ++ + K+ S
Sbjct: 464 GYETLFLFVSML-RSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCS 522
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV--- 300
+I + + G+++EA ++ F+ V ++ E M + +
Sbjct: 523 LIDMYSKCGMIEEAEKIHSRF---------------FQRANVSGTMEELEKMHNKRLQEM 567
Query: 301 -TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
WN +I G + E+ F +M E G +PD T+ +VL C++L + LG+QIHA
Sbjct: 568 CVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHA 627
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
Q IK + + ++ MY++CG++ + L F D ++WN++ICG A+HG E+
Sbjct: 628 QVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEE 687
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A++LFERM L + KP+ +TF+ +L AC++ GL+D+G YF MK Y L P+ HY+ +V
Sbjct: 688 AIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMV 747
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH-NNIKVGEIAGERVMELEP 538
D+LG+ G + A+ L+ E+ E +W LLG C IH NN++V E A ++ L+P
Sbjct: 748 DILGKSGKVKRALELIREM---PFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDP 804
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+S Y +L+ +Y G E + M+ +KKEPGCSW+++ D HVFL GD +HP
Sbjct: 805 QDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHP 864
Query: 599 KFHRLRYLLNLLHTEIE 615
++ + L L+++E++
Sbjct: 865 RWEEIYEELGLIYSEMK 881
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 138/563 (24%), Positives = 256/563 (45%), Gaps = 57/563 (10%)
Query: 21 TVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
T N +++ Y + +A +F++MP RD+ ++N +I G +S+++ A F+ M V
Sbjct: 83 TFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPV 142
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLA--- 133
RDVV+WNSM+SGY+ NG +++ VF M + D ++ +++ + L
Sbjct: 143 RDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI 202
Query: 134 ESYFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
+G DV + + +++ + R VE+ ++F +P K+ +W+ +IAG + N +
Sbjct: 203 HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLL 262
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
+A F++M Q +N V+ S + + +C +R G
Sbjct: 263 SLALKFFKEM---------QKVNAGVSQ-------SIYASVLRSCAALSE------LRLG 300
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
AH+ + I T + Y + + A +F+ + +N MI G +
Sbjct: 301 GQLHAHALKSDFAADGIVR-TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 359
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
+ G + L F ++ SG D + + V C+ + L G QI+ AIK + + V
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+NA I MY +C + A F + D +SWN+II +G + L LF M +
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 479
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
+PD+ TF +L AC+ L + +K+ + S+ ++D+ + G+I+EA
Sbjct: 480 EPDEFTFGSILKACTGGSLGYGMEIHSSIVKSG--MASNSSVGCSLIDMYSKCGMIEEAE 537
Query: 493 NLLNEI--RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTE 549
+ + RA+ V G + ++HN +R+ E+ + NS +
Sbjct: 538 KIHSRFFQRAN-------VSGTMEELEKMHN---------KRLQEMCVSWNS-----IIS 576
Query: 550 MYLSCGRREDAKRIFAQMKENGV 572
Y+ + EDA+ +F +M E G+
Sbjct: 577 GYVMKEQSEDAQMLFTRMMEMGI 599
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 144/555 (25%), Positives = 237/555 (42%), Gaps = 58/555 (10%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGLM 63
+A + F+ MP RD V+WN M+ GY +NG ++ +F M E D T+ ++
Sbjct: 132 KANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCS 191
Query: 64 QSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
++ ++ G+ VR DVV ++++ Y E+LRVF G+P K+ VSW+
Sbjct: 192 FLEDTSLGMQI-HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWS 250
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA----K 174
+I V + LA +FKEM + + ++R + +L ++ A
Sbjct: 251 AIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS 310
Query: 175 DVQAWNLMIAGYLD--NGCVGV--AEDLFQKMHDRDLTSWKQLINGLVNSRR-IDAAISY 229
D A ++ LD C + A+ LF + + S+ +I G A + +
Sbjct: 311 DFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLF 370
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWT-NVIVG------YFEM 282
+ M S+ V LVK L+ Y + +S + +V V Y +
Sbjct: 371 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKC 430
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
+ A +VF+ M RD WN +I +N G E L FV M S PD TF S+L
Sbjct: 431 QALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 490
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA------LLEFSSV 396
C+ +L G +IH+ +K ++V ++I MY++CG I+ A + ++V
Sbjct: 491 KACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV 549
Query: 397 P--------IHD------IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
+H+ +SWNSII G +E A LF RM PD T+ V
Sbjct: 550 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATV 609
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC--VVDLLGRFG-LIDEAMNLLNEIR 499
L C+ G+ + K + +S Y C +VD+ + G L D + +R
Sbjct: 610 LDTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLR 666
Query: 500 ADGIEVSPTVWGALL 514
D + W A++
Sbjct: 667 RDFV-----TWNAMI 676
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/307 (18%), Positives = 118/307 (38%), Gaps = 62/307 (20%)
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
+F S F+ V C+ L+LG+Q HA I T V N ++ +
Sbjct: 33 FSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQV 92
Query: 380 YARCGNIQSALLEFSSVPIHD-------------------------------IISWNSII 408
Y + SA + F +P+ D ++SWNS++
Sbjct: 93 YTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSML 152
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY-------------------- 448
G +G + K++E+F M + D TF +L CS+
Sbjct: 153 SGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCD 212
Query: 449 ------AGLVD---QGRYYFDCMKN-KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
+ L+D +G+ + + ++ + + S ++ ++ + L+ A+ E+
Sbjct: 213 TDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM 272
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT-EMYLSCGRR 557
+ VS +++ ++L +C + +++G ++ + G+ T +MY C
Sbjct: 273 QKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNM 332
Query: 558 EDAKRIF 564
+DA+ +F
Sbjct: 333 QDAQILF 339
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 188/646 (29%), Positives = 325/646 (50%), Gaps = 41/646 (6%)
Query: 11 NLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYN-TVIAGLMQSDNVQ 69
+FD++ +R+ V+WN +I + A+ F M + D+ + T+++ + N
Sbjct: 150 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFP 209
Query: 70 GAKEVFDGMEVR---------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
+ + G +V + N++++ Y G + + + +D+V+WN V
Sbjct: 210 MPEGLLMGKQVHAYGLRKGELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTV 269
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNG---------LVREGRIVEARKLFDKM 171
+ +L ++ A Y +EM V ++ ++R G+ + A L +
Sbjct: 270 LSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGS 329
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
++ + ++ Y + V +F M DR + W +I G + + A+ F
Sbjct: 330 LDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFI 389
Query: 232 QMPETCEKTWNS-----IISVLIRNGLV--KEA-HSYLEKYPYSNIASWTNVIVG-YFEM 282
+M E+ NS ++ +R+G KEA H ++ K N ++ Y +
Sbjct: 390 EMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRL 449
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK--ESGPS-------- 332
G++ A ++F M RD+ WN +I G ++ E+ L +M+ E S
Sbjct: 450 GKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSL 509
Query: 333 -PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
P++ T ++L C+ L L G++IHA AIK V +A++ MYA+CG +Q +
Sbjct: 510 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 569
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F +PI ++I+WN I+ HG ++ A+++ M + KP+++TF+ V +ACS++G+
Sbjct: 570 VFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGM 629
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
V++G F MK Y ++P S HY CVVDLLGR G + EA L+N I + + W
Sbjct: 630 VNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAG--AWS 687
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
+LLGACRIHNN+++GEIA + +++LEPN + Y++L +Y S G A + MK G
Sbjct: 688 SLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQG 747
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
V+KEPGCSWI+ D H F++GDSSHP+ +LR L L + +E
Sbjct: 748 VRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKE 793
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 137/599 (22%), Positives = 265/599 (44%), Gaps = 68/599 (11%)
Query: 24 WNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGLMQSDNVQGAKEVFD--- 76
W ++R ++ L A+ + M + D F + ++ + ++ K++
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 77 --GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAE 134
G V V N++++ Y G +VF + ++ VSWN +I +L + ++ ++A
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 135 SYFKEMGARDV--ASWTIMVNGL------VREGRIVEARKLFDKMPAKDVQAW--NLMIA 184
F+ M DV +S+T++ L + EG ++ + + ++ ++ N ++A
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIINTLVA 240
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWNS 243
Y G + ++ L RDL +W +++ L + + A+ Y ++M E E +
Sbjct: 241 MYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFT 300
Query: 244 IISVL--------IRNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEMGEVGSAI 289
I SVL +R G KE H+Y K N + N VG Y +V S
Sbjct: 301 ISSVLPACSHLEMLRTG--KELHAYALK----NGSLDENSFVGSALVDMYCNCKQVLSGC 354
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES-GPSPDNATFTSVLTICSDL 348
+VF+ M R + +WN MI G +N+ EE L F++M+ES G ++ T V+ C
Sbjct: 355 RVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRS 414
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
IH +K ++ V NA++ MY+R G I A F + D+++WN+II
Sbjct: 415 GAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTII 474
Query: 409 CGLAYHGYAEKALELFERMRLTD-----------FKPDDITFVGVLSACSYAGLVDQGR- 456
G + E AL + +M++ + KP+ IT + +L +C+ + +G+
Sbjct: 475 TGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKE 534
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
+ +KN L A + +VD+ + G + + + ++I + W ++ A
Sbjct: 535 IHAYAIKNN--LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNV----ITWNVIVMA 588
Query: 517 CRIHNNIK--VGEIAGERVMELEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKEN 570
+H N + + + V ++PN + ++ +C G + +IF MK++
Sbjct: 589 YGMHGNSQDAIDMLRMMMVQGVKPNE----VTFISVFAACSHSGMVNEGLKIFYNMKKD 643
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PER---- 50
R +I A+ +F KM RD VTWN +I GY + ++A+ + ++M ER
Sbjct: 448 RLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRV 507
Query: 51 ----DMFTYNTVIAGLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEA 102
+ T T++ + KE+ DV ++++ Y G + +
Sbjct: 508 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMS 567
Query: 103 LRVFHGMPLKDVVSWNLVIGA 123
+VF +P+++V++WN+++ A
Sbjct: 568 RKVFDQIPIRNVITWNVIVMA 588
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 75/183 (40%), Gaps = 57/183 (31%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+Q ++ +FD++P R+ +TWNV++ Y +G +A+ + M
Sbjct: 564 LQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMM------------------ 605
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
VQG K + VT+ S+ + +G+++E L++F+ M
Sbjct: 606 -MVQGVKP--------NEVTFISVFAACSHSGMVNEGLKIFYNMK--------------- 641
Query: 126 NCQRMDLAESYFKEMGARDVAS-WTIMVNGLVREGRIVEARKLFDKMPAK--DVQAWNLM 182
K+ G + + +V+ L R GR+ EA +L + +P AW+ +
Sbjct: 642 ------------KDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSL 689
Query: 183 IAG 185
+
Sbjct: 690 LGA 692
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 175/560 (31%), Positives = 301/560 (53%), Gaps = 44/560 (7%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVN 126
A +VFD M R++VTW MI+ + G +A+ +F M L D +++ V+ A
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 127 CQRMDLAE---SYFKEMG-ARDVASWTIMVNGLVR---EGRIVEARKLFDKMPAKDVQAW 179
+ L + S +G A DV +V+ + +G + ++RK+F++MP +V +W
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 180 NLMIAGYLDNG-CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
+I Y +G C A +LF KM I+G + F + + C
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKM-----------ISGHIRPNHFS-----FSSVLKACG 167
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTT 297
+ ++ +SY K +++ N ++ Y G + A K F+++
Sbjct: 168 NLSDPYTG--------EQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFE 219
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
+++ +N ++ G +N EE F ++ ++G TF S+L+ + + + G QI
Sbjct: 220 KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQI 279
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H + +K + NA+I+MY+RCGNI++A F+ + ++ISW S+I G A HG+A
Sbjct: 280 HGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFA 339
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
+ALE+F +M T KP++IT+V VLSACS+ G++ +G+ +F+ M ++ + PR HY C
Sbjct: 340 TRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYAC 399
Query: 478 VVDLLGRFGLIDEAMNLLNE--IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
+VDLLGR GL+ EAM +N + AD + VW LLGACR+H N ++G A E ++E
Sbjct: 400 MVDLLGRSGLLVEAMEFINSMPLMADAL-----VWRTLLGACRVHGNTELGRHAAEMILE 454
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
EP++ Y++L+ ++ S G+ +D +I MKE + KE GCSWI++ + H F G++
Sbjct: 455 QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGET 514
Query: 596 SHPKFHRLRYLLNLLHTEIE 615
SHP+ ++ L+ L ++I+
Sbjct: 515 SHPQAWQIYQELDQLASKIK 534
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 210/472 (44%), Gaps = 60/472 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYNTVIA-- 60
A +FDKMP+R+ VTW +MI + + G +A+ LF M P+R FTY++V++
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDR--FTYSSVLSAC 61
Query: 61 ---GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGY---VCNGLIDEALRVFHGMPLKDV 114
GL+ ++ + G+ + DV S++ Y +G +D++ +VF MP +V
Sbjct: 62 TELGLLALGKQLHSRVIRLGLAL-DVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 120
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGR------IVEARKLF 168
+SW +I A D KE + + M++G +R + L
Sbjct: 121 MSWTAIITAYAQSGECD------KEA----IELFCKMISGHIRPNHFSFSSVLKACGNLS 170
Query: 169 DKMPAKDVQAW-------------NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
D + V ++ N +I+ Y +G + A F + +++L S+ +++
Sbjct: 171 DPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVD 230
Query: 216 GLVNSRRIDAAISYFKQMPET----CEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSN 268
G + + + A F ++ +T T+ S++S G + ++ H L K Y +
Sbjct: 231 GYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKS 290
Query: 269 IASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
N ++ Y G + +A +VF M R+V W MI G ++ L+ F +M
Sbjct: 291 NQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKML 350
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGN 385
E+G P+ T+ +VL+ CS + + G Q H ++ + + M+ + R G
Sbjct: 351 ETGTKPNEITYVAVLSACSHVGMISEG-QKHFNSMYKEHGIVPRMEHYACMVDLLGRSGL 409
Query: 386 IQSALLEFSSVPI-HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+ A+ +S+P+ D + W +++ HG E E + + +PDD
Sbjct: 410 LVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAE--MILEQEPDD 459
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 107/233 (45%), Gaps = 49/233 (21%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
R+ R+++A+ FD + +++ V++N ++ GY KN + A LFN++ + + FT+ +
Sbjct: 203 RSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFAS 262
Query: 58 VIAGLM-----------------------------------QSDNVQGAKEVFDGMEVRD 82
+++G + N++ A +VF+ ME R+
Sbjct: 263 LLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRN 322
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAESYF- 137
V++W SMI+G+ +G AL +FH M + +++ V+ A + + + +F
Sbjct: 323 VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFN 382
Query: 138 ---KEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMP-AKDVQAWNLMIAG 185
KE G + + MV+ L R G +VEA + + MP D W ++
Sbjct: 383 SMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 435
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 158/361 (43%), Gaps = 32/361 (8%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDN-AMCLFNQMPE----RDMFTYNT 57
+ + +++ +F++MP+ + ++W +I Y ++G D A+ LF +M + F++++
Sbjct: 102 DGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSS 161
Query: 58 VIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V+ + ++V+ G+ + V NS+IS Y +G +++A + F + K
Sbjct: 162 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVG-NSLISMYARSGRMEDARKAFDILFEK 220
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVEARKLF 168
++VS+N ++ + + A F E+ + ++ +++G G + + ++
Sbjct: 221 NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIH 280
Query: 169 DKMPAKDVQA----WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
++ ++ N +I+ Y G + A +F +M DR++ SW +I G
Sbjct: 281 GRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFAT 340
Query: 225 AAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEK-YPYSNIASWTNVIVGY 279
A+ F +M ET K T+ +++S G++ E + Y I
Sbjct: 341 RALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACM 400
Query: 280 FE-MGEVGSAIKVFELMTT----RDVTVWNVMIFGL---GENDLGEEGLKFFVQMKESGP 331
+ +G G ++ E + + D VW ++ G +LG + ++ + P
Sbjct: 401 VDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDP 460
Query: 332 S 332
+
Sbjct: 461 A 461
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 256/449 (57%), Gaps = 10/449 (2%)
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
D+ AWN+++ Y+ + + A LF +M +R+ S+ LI G S R AI F ++
Sbjct: 72 DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131
Query: 235 ETCEKTWNSIISVLIRNG------LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGS 287
+ SVL L + H ++ K + +N ++ Y + G + +
Sbjct: 132 REVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMEN 191
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
++++F R+ WN +I G + GE+ L+ F+ M E T++S L C+
Sbjct: 192 SMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACAS 251
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
L L+ G QIH+ +K ++ V+NA+I MYA+CG+I+ A L F + D +SWN++
Sbjct: 252 LAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAM 311
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
I G + HG +AL +F++M+ T+ KPD +TFVGVLSAC+ AGL+DQG+ YF M +
Sbjct: 312 ISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHG 371
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
++P HYTC+V LLGR G +D+A+ L++EI + S VW ALLGAC IHN+I++G
Sbjct: 372 IEPCIEHYTCMVWLLGRGGHLDKAVKLIDEI---PFQPSVMVWRALLGACVIHNDIELGR 428
Query: 528 IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGG 587
I+ +RV+E+EP + +++L+ MY + R ++ + MK GVKKEPG SWI+
Sbjct: 429 ISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTV 488
Query: 588 HVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
H F GD+SHP+ + +L LH + ++
Sbjct: 489 HSFTVGDTSHPEVRVINGMLEWLHMKTKK 517
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 120/282 (42%), Gaps = 52/282 (18%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-------------- 49
R++ + LF + P R+ VTWN +I G+ + G + A+ LF M E
Sbjct: 187 GRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSAL 246
Query: 50 -------------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
+D+ N +I + +++ A+ VFD M +D V
Sbjct: 247 RACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEV 306
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL----VIGALVNCQRMDLAESYFKEM 140
+WN+MISGY +GL EALR+F M +V L V+ A N +D ++YF M
Sbjct: 307 SWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSM 366
Query: 141 GARD-----VASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGV 194
+ +T MV L R G + +A KL D++P + V W ++ + + + +
Sbjct: 367 IQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIEL 426
Query: 195 AEDLFQK---MHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
Q+ M +D + L N ++R D S K M
Sbjct: 427 GRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNM 468
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 153/348 (43%), Gaps = 62/348 (17%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF----------------------- 44
+A LFD+MP+R+T+++ +I+GY ++ A+ LF
Sbjct: 91 DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVLPNQFTFASVLQACAT 150
Query: 45 -------NQMP--------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
NQ+ D+F N ++ + ++ + E+F R+ VTWN++
Sbjct: 151 MEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTV 210
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI-GALVNCQRMDLAES-------YFKEMG 141
I G+V G ++ALR+F M V + + AL C + E K
Sbjct: 211 IVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTF 270
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+D+ +++ + G I +AR +FD M +D +WN MI+GY +G A +F K
Sbjct: 271 DKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDK 330
Query: 202 MHDR----DLTSWKQLINGLVNSRRIDAAISYFKQM-----PETCEKTWNSIISVLIRNG 252
M + D ++ +++ N+ +D +YF M E C + + ++ +L R G
Sbjct: 331 MQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGG 390
Query: 253 LVKEAHSYLEKYPYS-NIASW-----TNVIVGYFEMGEVGSAIKVFEL 294
+ +A +++ P+ ++ W VI E+G + SA +V E+
Sbjct: 391 HLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRI-SAQRVLEM 437
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/646 (29%), Positives = 336/646 (52%), Gaps = 38/646 (5%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIA 60
++ +AQ++FD+M R+T+TW +I+G+ + +++ + +M E + T + ++
Sbjct: 128 KLGDAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQ 187
Query: 61 G------LMQSDNVQG--AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
L++ + + G K FD DV S+IS Y G + A +V+ + K
Sbjct: 188 ACDSLENLVRGEQIHGFVIKRGFD----EDVFVGTSLISMYSRCGDLGAAEKVYSNLAYK 243
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR--EGRI-VEARKLFD 169
DV N +I + A F + + ++ G I VE ++
Sbjct: 244 DVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLH 303
Query: 170 KMPAK-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
M K ++ N +++ Y+ +G + AE F M +R+L SW L++G V +
Sbjct: 304 GMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGK 363
Query: 225 AAISYFKQMPE-------TCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVI 276
A+ F Q+ E C T S GL + H ++ K Y +++ T +I
Sbjct: 364 KALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALI 423
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG-LGENDLGEEGLKFFVQMKESGPSPDN 335
Y + ++ SA VF + +++ +N ++ G +G ++ E+ + F Q++ + PD+
Sbjct: 424 DLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIGADE--EDAMALFSQLRLADIKPDS 481
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
TF +L++ +D L G+ +HA IK +V NA+ITMYA+CG+I A F S
Sbjct: 482 VTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYS 541
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+ D ISWN++I A HG KAL LFE M+ +F PD+IT + VL ACSY+GL+++G
Sbjct: 542 MNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEG 601
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
F+ M++KY ++P H+ C+VDLLGR G + EAM+ +N G SP +W L+
Sbjct: 602 FCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSG---SPLLWRTLVH 658
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
C++H ++ G+IA + +++L P +G Y++++ +Y G +A R+ M + V KE
Sbjct: 659 VCKLHGDLNFGQIASKHLLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKE 718
Query: 576 PGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILFD 621
G SWI+I++ H F++ D HP+ + L+LL +E+++ ++++
Sbjct: 719 AGSSWIEIDNKVHQFVASDKDHPESKEIYAKLDLLKSEMKQNMIYN 764
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 134/548 (24%), Positives = 241/548 (43%), Gaps = 61/548 (11%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+ D F N ++ + + + A+ VFD M VR+ +TW ++I G++ ++ R+
Sbjct: 110 QNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIARE 169
Query: 109 M----PLKDVVSWNLVIGA---LVNCQRMDLAESYFKEMG-ARDVASWTIMVNGLVREGR 160
M + + ++++ A L N R + + + G DV T +++ R G
Sbjct: 170 MYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGD 229
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ A K++ + KDV+ N MI+ Y GC A +F + L ++++
Sbjct: 230 LGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISA 289
Query: 221 RRIDAAISYFKQMPETCEK--------TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW 272
D + + + C K N+I+SV +++G+++EA N+ SW
Sbjct: 290 CNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSW 349
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T ++ GY + G G++ L+ F Q+ E G
Sbjct: 350 TALLSGYVKNGN-------------------------------GKKALEGFSQILELGVG 378
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
D+ F ++L CS+ L LG QIH +K+ +V A+I +YA+C ++SA L
Sbjct: 379 FDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLV 438
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEK-ALELFERMRLTDFKPDDITFVGVLS-ACSYAG 450
F S+ +I+S+N+I+ G Y G E+ A+ LF ++RL D KPD +TF +LS + A
Sbjct: 439 FHSLLDKNIVSFNAILSG--YIGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQAC 496
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
LV + +K + P + V+ + + G I +A L + + W
Sbjct: 497 LVKGKCLHAYIIKTGFEANPSVGN--AVITMYAKCGSIGDACQLFYSMNY----LDSISW 550
Query: 511 GALLGACRIHNNIKVGEIAGERVMELE--PNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
A++ A +H + I E + + E P+ + +L S G E+ +F M+
Sbjct: 551 NAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYS-GLLEEGFCLFNDME 609
Query: 569 EN-GVKKE 575
G+K E
Sbjct: 610 SKYGIKPE 617
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 6/212 (2%)
Query: 241 WNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMT 296
W ++ + I +G L + H++L K Y N A N +V Y + ++G A VF+ M
Sbjct: 81 WPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEML 140
Query: 297 TRDVTVWNVMIFG-LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
R+ W +I G L ND+ E + +M G + T + +L C L L G
Sbjct: 141 VRNTITWTTLIKGHLQVNDV-ESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGE 199
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
QIH IK ++ V ++I+MY+RCG++ +A +S++ D+ N +I G
Sbjct: 200 QIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAG 259
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACS 447
EKA+ +F + + +P+D TF V+SAC+
Sbjct: 260 CGEKAIGVFLHLLGSGLEPNDYTFTNVISACN 291
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 124/281 (44%), Gaps = 29/281 (10%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+++ ++EA+ F M +R+ V+W ++ GY KNG A+ F+Q+ E D +
Sbjct: 326 VKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFA 385
Query: 57 TVIAGLMQSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
T++ G + N+ ++ + V DV ++I Y + A VFH + K
Sbjct: 386 TLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDK 445
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR---------EGRIVE 163
++VS+N ++ + D A + F ++ D+ ++ L+ +G+ +
Sbjct: 446 NIVSFNAILSGYIGADEED-AMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLH 504
Query: 164 A---RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
A + F+ P+ N +I Y G +G A LF M+ D SW +I+
Sbjct: 505 AYIIKTGFEANPS----VGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALH 560
Query: 221 RRIDAAISYFKQMPE----TCEKTWNSIISVLIRNGLVKEA 257
+ A+ F++M + E T S++ +GL++E
Sbjct: 561 GQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEG 601
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 197/638 (30%), Positives = 325/638 (50%), Gaps = 33/638 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------DMFTYNTVI 59
+ EA LFDKMP+++ ++WN +IRG+ +NGF A F + E D+ T T++
Sbjct: 261 LDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLL 320
Query: 60 AGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
NV V GM V+ +++ N++I Y G + EA +F + K V
Sbjct: 321 PVCSGEGNVD-VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSV 379
Query: 115 VSWNLVIGALVN----CQRMDLAESYFKEMGARDVASWTIM--VNGLVREGRIVEARKLF 168
VSWN +IGA + DL + E +V TI+ + + E ++ R L
Sbjct: 380 VSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALH 439
Query: 169 DKMPAKDVQAWNLM----IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV-NSRRI 223
Q L+ IA Y G + AE +F M+ + ++SW +I G N I
Sbjct: 440 GYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPI 499
Query: 224 DAAISYFKQMPETCEKTWNSIISVLI---RNGLV---KEAHSYLEKYPYS-NIASWTNVI 276
A YF+ SI+S+L+ R GL+ KE H ++ + N +++
Sbjct: 500 KALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLL 559
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
YF + FE M ++ WN M+ G +N+L E L F QM G PD
Sbjct: 560 SLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEI 619
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
S+L CS L L LG+++H A+K + + V+ +++ MYA+ G + + F+ +
Sbjct: 620 AIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRL 679
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
++ SWN +I G HG KA+ELFE M+ +D +PD TF+GVL AC +AGLV +G
Sbjct: 680 NGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGL 739
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
Y M+ Y L+P HY CV+D+LGR G ++EA+N +NE+ E +W +LL +
Sbjct: 740 NYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPE---EPDAKIWSSLLSS 796
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
+ ++++GE E+++ LE N + Y++L+ +Y + G+ + + + +MK+ ++K+
Sbjct: 797 SITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDV 856
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
GCSWI++ + F++G++S+P +R + N L +I
Sbjct: 857 GCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQI 894
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 128/546 (23%), Positives = 237/546 (43%), Gaps = 42/546 (7%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-----ERDMFTYNTVIAGL 62
E++ +FD++ ++ WN ++ GY +N D A+ F ++ + D FT+ +I
Sbjct: 161 ESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKAC 220
Query: 63 MQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
++ K V GM V+ D+ N+MI+ Y G +DEA+ +F MP ++++SW
Sbjct: 221 TGKCDIHLGKSV-HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISW 279
Query: 118 NLVIGALVNCQRMDLAESYFKEMGAR------DVASWTIMVNGLVREGRIVEARKLFDKM 171
N +I A F+ + DVA+ ++ EG V+ + M
Sbjct: 280 NSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGN-VDVGMVIHGM 338
Query: 172 PAK-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
K ++ N +I Y GC+ A LF+K+ ++ + SW +I +
Sbjct: 339 AVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFET 398
Query: 227 ISYFKQM------PETCEKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNV-I 276
++M E E T +++ + ++ H Y ++ + N I
Sbjct: 399 FDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFI 458
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A VF M T+ V+ WN +I G +N + L F+ +M G PD+
Sbjct: 459 AAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDF 518
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ S+L C L L G++IH ++ + N F VS ++++Y C F
Sbjct: 519 SIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVS--LLSLYFHCSKPFYGRTYFE 576
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
++ + + WN+++ G + + +AL LF +M +PD+I +L ACS +
Sbjct: 577 TMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGL 636
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
G+ C K L + ++D+ + G + + + N R +G EV+ W ++
Sbjct: 637 GK-EVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFN--RLNGKEVAS--WNVMI 691
Query: 515 GACRIH 520
+H
Sbjct: 692 TGFGVH 697
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 8/247 (3%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGP 331
T +I Y G + VF+ + +++ WN ++ G N+L +E + F+++ +
Sbjct: 147 TRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEF 206
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
PDN TF ++ C+ + LG+ +H A+K+ V NAMI +Y +CG + A+
Sbjct: 207 QPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVE 266
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT--DFKPDDITFVGVLSACSYA 449
F +P ++ISWNS+I G + +G+ +A F + + PD T V +L CS
Sbjct: 267 LFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGE 326
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
G VD G M K L ++D+ + G + EA L +I +
Sbjct: 327 GNVDVGMVIHG-MAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSV----VS 381
Query: 510 WGALLGA 516
W +++GA
Sbjct: 382 WNSMIGA 388
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFT---TVSNAMITMYARCGNIQSALLEFSSVP 397
+L C +++GR++ + +QF+ ++ +ITMY+ CG + L F +
Sbjct: 113 LLQKCGQYKNVEIGRKL--DEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLL 170
Query: 398 IHDIISWNSIICGLAYHGYAEKALELF-ERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
++ WN+++ G + ++A+ F E + +T+F+PD+ TF ++ AC+ + G+
Sbjct: 171 NKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGK 230
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
M K L ++ L G+ G +DEA+ L +++
Sbjct: 231 SVHG-MAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKM 271
>gi|302142753|emb|CBI19956.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 253/450 (56%), Gaps = 18/450 (4%)
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
T +V + G +V++RK+FD MP ++ WN MI GYL NG A LF+KM R
Sbjct: 4 TSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAV 63
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEK--TWNSIISVLIRNGLVKEAHSYLEKYPY 266
+W ++I+G S + A +F +P TW ++ RN ++ A E P
Sbjct: 64 TWIEMIDGFARSGDTETARRFFDDVPSELRNVVTWTVMVDGYARNAEMEAAREVFEGMPQ 123
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
N +W+++I GY + G V A +F+ + R++ WN +I G +N EE L+ F +M
Sbjct: 124 RNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKM 183
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIH----AQAIKIARNQFTTVSNAMITMYAR 382
+ G PD T SVL+ CS L LD G++IH + IK+ NQF V N ++ MYA+
Sbjct: 184 QAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKL--NQF--VLNGLVDMYAK 239
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CG++ +A L F + + WNS+I G A HG +++ALE F RM + PD+ITF+ V
Sbjct: 240 CGDLANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSV 299
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
LSAC++ G V+ G F M+ KY L HY C++DLLGR G I EA +L+ +
Sbjct: 300 LSACAHGGFVNAGLEIFSRME-KYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMP--- 355
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN-NSGV---YLILTEMYLSCGRRE 558
++ + VWGALLGACR+H ++++ + E +++++ N +SG Y++L+ +Y + R E
Sbjct: 356 VKPNDVVWGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWE 415
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGH 588
A+++ +M G +K GCS I + H
Sbjct: 416 KAEKMRMEMANKGFQKTSGCSSIMPGNNTH 445
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 194/434 (44%), Gaps = 67/434 (15%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ +++ +FD MP+R+ VTWN MI GY NG +A+ LF +M R T+ +I G +S
Sbjct: 16 VVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIEMIDGFARS 75
Query: 66 DNVQGAKEVFDGM--EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
+ + A+ FD + E+R+VVTW M+ GY N ++ A VF GMP
Sbjct: 76 GDTETARRFFDDVPSELRNVVTWTVMVDGYARNAEMEAAREVFEGMP------------- 122
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
R+ +W+ M++G ++G + EAR +FD++P +++ WN +I
Sbjct: 123 ------------------QRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLI 164
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS 243
+GY NG A + F KM E E T S
Sbjct: 165 SGYAQNGFSEEALEAFGKMQAEGF---------------------------EPDEVTIAS 197
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM----GEVGSAIKVFELMTTRD 299
++S + GL+ + I V+ G +M G++ +A +FE M R+
Sbjct: 198 VLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRN 257
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
WN MI G + +E L+FF +M++S PD TF SVL+ C+ ++ G +I +
Sbjct: 258 RACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEIFS 317
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYHGYA 417
+ K +I + R G I+ A +P+ +D++ W +++ H
Sbjct: 318 RMEKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVV-WGALLGACRVHLDM 376
Query: 418 EKALELFERMRLTD 431
E A + E + D
Sbjct: 377 EMADRVVEEIVKVD 390
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 148/282 (52%), Gaps = 18/282 (6%)
Query: 2 RNARIQEAQNLFDKMPQ--RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVI 59
R+ + A+ FD +P R+ VTW VM+ GY +N ++ A +F MP+R+ F ++++I
Sbjct: 74 RSGDTETARRFFDDVPSELRNVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMI 133
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVV 115
+G + NV+ A+ +FD + VR++V WNS+ISGY NG +EAL F M + D V
Sbjct: 134 SGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEV 193
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKM 171
+ V+ A +D + M + + ++NGLV + G + AR +F+ M
Sbjct: 194 TIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGM 253
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAI 227
++ WN MI+G+ +G A + F +M D D ++ +++ + ++A +
Sbjct: 254 AHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGL 313
Query: 228 SYFKQMPE----TCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
F +M + T K + +I +L R G +KEA+ +++ P
Sbjct: 314 EIFSRMEKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMP 355
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
+ +++ MYA+CGN+ + F +P + ++WN++ICG +G ++ A+ LFE+M +
Sbjct: 2 IGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIR- 60
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+T++ ++ + +G + R +FD
Sbjct: 61 ---TAVTWIEMIDGFARSGDTETARRFFD 86
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 187/603 (31%), Positives = 306/603 (50%), Gaps = 43/603 (7%)
Query: 36 FLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC 95
+LD ++ + + ++F++N I G +S+N KE F + + M+ C
Sbjct: 102 YLDYSVKILKGIENPNIFSWNVTIRGFSESEN---PKESF--------LLYKQMLRHGCC 150
Query: 96 NGLIDE-----ALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTI 150
D +V + L + ++++G ++ R++L S+ AS
Sbjct: 151 ESRPDHFTYPVLFKVCADLRLSSL--GHMILGHVLKL-RLELV-SHVHNASIHMFASCGD 206
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
M N ARK+FD+ P +D+ +WN +I GY G A +++ M +
Sbjct: 207 MEN----------ARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPD 256
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTW--------NSIISVLIRNGLVKEAHSYLE 262
+ GLV+S + ++ K+ E ++ N+++ + + G + EA +
Sbjct: 257 DVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFD 316
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
I SWT +I GY G + + K+F+ M +DV +WN MI G + G++ L
Sbjct: 317 NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALAL 376
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F +M+ S PD T L+ CS L LD+G IH K + + + +++ MYA+
Sbjct: 377 FQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAK 436
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CGNI AL F + + +++ +II GLA HG A A+ F M PD+ITF+G+
Sbjct: 437 CGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGL 496
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
LSAC + G++ GR YF MK+++ L P+ HY+ +VDLLGR GL++EA L+ +
Sbjct: 497 LSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM---P 553
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
+E VWGALL CR+H N+++GE A ++++EL+P++SG+Y++L MY EDAKR
Sbjct: 554 MEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKR 613
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL--HTEIEREILF 620
M E GV+K PGCS I++N F+ D S P+ ++ L+ L H +LF
Sbjct: 614 ARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMRSSLSVLF 673
Query: 621 DAY 623
Y
Sbjct: 674 SEY 676
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 217/480 (45%), Gaps = 74/480 (15%)
Query: 23 TWNVMIRGYFKNGFLDNAMCLFNQM-------PERDMFTY-------------------- 55
+WNV IRG+ ++ + L+ QM D FTY
Sbjct: 120 SWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMIL 179
Query: 56 ---------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLID 100
N I +++ A++VFD VRD+V+WN +I+GY G +
Sbjct: 180 GHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAE 239
Query: 101 EALRVFHGMPLKDVVSWNL-VIGALVNCQRM-DLAE-----SYFKEMGARDVASWTI-MV 152
+A+ V+ M + V ++ +IG + +C + DL Y KE G R TI +V
Sbjct: 240 KAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLR----MTIPLV 295
Query: 153 NGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
N L+ + G I EAR++FD + + + +W MI+GY G + V+ LF M ++D+
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEA---HSYL 261
W +I G V ++R A++ F++M + K T +S + G + H Y+
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 262 EKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
EKY S N+A T+++ Y + G + A+ VF + TR+ + +I GL + +
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 475
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ-AIKIARNQFTTVSNAMITM 379
+F +M ++G +PD TF +L+ C + GR +Q + N + M+ +
Sbjct: 476 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDL 535
Query: 380 YARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERM--RLTDFKPDD 436
R G ++ A S+P+ D W +++ G HG +EL E+ +L + P D
Sbjct: 536 LGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHG----NVELGEKAAKKLLELDPSD 591
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 173/418 (41%), Gaps = 95/418 (22%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ A+ +FD+ P RD V+WN +I GY K G + A+ ++ M + + + GL+ S
Sbjct: 207 MENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSS 266
Query: 66 DNVQG---------------------------------------AKEVFDGMEVRDVVTW 86
++ G A+ +FD +E R +V+W
Sbjct: 267 CSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSW 326
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM------ 140
+MISGY GL+D + ++F M KDVV WN +IG V +R A + F+EM
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK 386
Query: 141 ----------------GARDVASW-----------------TIMVNGLVREGRIVEARKL 167
GA DV W T +V+ + G I EA +
Sbjct: 387 PDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSV 446
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRI 223
F + ++ + +I G +G A F +M D D ++ L++ + I
Sbjct: 447 FHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMI 506
Query: 224 DAAISYFKQMPETCE-----KTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIV 277
YF QM K ++ ++ +L R GL++EA +E P ++ A W ++
Sbjct: 507 QTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLF 566
Query: 278 GY-----FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
G E+GE +A K+ EL D ++ ++ GE ++ E+ + M E G
Sbjct: 567 GCRMHGNVELGE-KAAKKLLEL-DPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERG 622
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 184/666 (27%), Positives = 332/666 (49%), Gaps = 61/666 (9%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ LFD+MP ++ ++ N MI GY K+G L A LF+ M +R + T+ +I G Q +
Sbjct: 61 ARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRF 120
Query: 69 QGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-----DVVSWNL 119
A +F M V D +T +++SG+ ++E +V HG +K ++ N
Sbjct: 121 LEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQV-HGHVVKVGYDSTLMVCNS 179
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++ + + + LA FK M +D ++ ++ G +EG +A LF KM +
Sbjct: 180 LLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPS 239
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTS---WKQLI-NGLVN----SRRIDAAISYFK 231
A L G + Q++H + W + N L++ RI A F
Sbjct: 240 EFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFY 299
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYL----------EKYPYSNIAS---------- 271
+MPE ++N +I+ NG V+E+ ++P++ + S
Sbjct: 300 EMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEM 359
Query: 272 -------------WTNVIVG------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+ V+VG Y + + G A ++F + + W +I G +
Sbjct: 360 GRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQ 419
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
L E+GLK FV+M + D+AT+ S+L C++L +L LG+Q+H++ I+
Sbjct: 420 KGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFS 479
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+A++ MYA+CG+I+ AL F +P+ + +SWN++I A +G AL FE+M +
Sbjct: 480 GSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGL 539
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
+P+ ++F+ +L ACS+ GLV++G YF+ M Y L+PR HY +VD+L R G DEA
Sbjct: 540 QPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAE 599
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP-NNSGVYLILTEMY 551
L+ + + E+ +W ++L +CRIH N ++ A +++ ++ ++ Y+ ++ +Y
Sbjct: 600 KLMARMPFEPDEI---MWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIY 656
Query: 552 LSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLH 611
+ G + ++ ++E G++K P SW++I HVF + D+SHP+ + L+ L
Sbjct: 657 AAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELE 716
Query: 612 TEIERE 617
++E +
Sbjct: 717 KQMEEQ 722
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 165/383 (43%), Gaps = 43/383 (11%)
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
+ +DA++ P TC +N + ++ G + A ++ P+ N+ S +I+GY
Sbjct: 27 QHVDASMIKTGFDPNTCR--FNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYL 84
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G + +A +F+ M R V W ++I G +++ E F M G PD+ T +
Sbjct: 85 KSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLAT 144
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
+L+ ++ +++ Q+H +K+ + V N+++ Y + ++ A F + D
Sbjct: 145 LLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKD 204
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR---- 456
+++N+++ G + G+ A+ LF +M+ F+P + TF VL+A ++ G+
Sbjct: 205 NVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHS 264
Query: 457 ------YYFDCMKNKYFLQPRSAH--------------------YTCVVDLLGRFGLIDE 490
+ ++ L S H Y ++ G ++E
Sbjct: 265 FVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEE 324
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE------IAGERVMELEPNNSGVY 544
++ L E++ + + LL N+++G I + + E+ NS
Sbjct: 325 SLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNS--- 381
Query: 545 LILTEMYLSCGRREDAKRIFAQM 567
L +MY C + +A RIFA +
Sbjct: 382 --LVDMYAKCDKFGEANRIFADL 402
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 187/677 (27%), Positives = 326/677 (48%), Gaps = 85/677 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ R E+ +F +P++++V+W+ +I G +N L A+ F +M + + ++ A
Sbjct: 185 KGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYAS 244
Query: 62 LMQS---------------------------------------DNVQGAKEVFDGMEVRD 82
+++S DN+Q A+ +FD E +
Sbjct: 245 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 304
Query: 83 VVTWNSMISGYVCNGLIDEALRVFH-----GMPLKDVV------SWNLVIGALVNCQRMD 131
++N+MI+GY +AL +FH G+ ++ + LV G Q
Sbjct: 305 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 364
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
LA K + DV ++ + + EA ++FD+M +D +WN +IA + NG
Sbjct: 365 LA---IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 421
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN--------S 243
LF M R + G + ++ Y ++ + K+ S
Sbjct: 422 GYETLFLFVSML-RSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCS 480
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV--- 300
+I + + G+++EA ++ F+ V ++ E M + +
Sbjct: 481 LIDMYSKCGMIEEAEKIHSRF---------------FQRANVSGTMEELEKMHNKRLQEM 525
Query: 301 -TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
WN +I G + E+ F +M E G +PD T+ +VL C++L + LG+QIHA
Sbjct: 526 CVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHA 585
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
Q IK + + ++ MY++CG++ + L F D ++WN++ICG A+HG E+
Sbjct: 586 QVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEE 645
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A++LFERM L + KP+ +TF+ +L AC++ GL+D+G YF MK Y L P+ HY+ +V
Sbjct: 646 AIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMV 705
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH-NNIKVGEIAGERVMELEP 538
D+LG+ G + A+ L+ E+ E +W LLG C IH NN++V E A ++ L+P
Sbjct: 706 DILGKSGKVKRALELIREM---PFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDP 762
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+S Y +L+ +Y G E + M+ +KKEPGCSW+++ D HVFL GD +HP
Sbjct: 763 QDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHP 822
Query: 599 KFHRLRYLLNLLHTEIE 615
++ + L L+++E++
Sbjct: 823 RWEEIYEELGLIYSEMK 839
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 138/563 (24%), Positives = 256/563 (45%), Gaps = 57/563 (10%)
Query: 21 TVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
T N +++ Y + +A +F++MP RD+ ++N +I G +S+++ A F+ M V
Sbjct: 41 TFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPV 100
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLA--- 133
RDVV+WNSM+SGY+ NG +++ VF M + D ++ +++ + L
Sbjct: 101 RDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI 160
Query: 134 ESYFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
+G DV + + +++ + R VE+ ++F +P K+ +W+ +IAG + N +
Sbjct: 161 HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLL 220
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
+A F++M Q +N V+ S + + +C +R G
Sbjct: 221 SLALKFFKEM---------QKVNAGVSQ-------SIYASVLRSCAALSE------LRLG 258
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
AH+ + I T + Y + + A +F+ + +N MI G +
Sbjct: 259 GQLHAHALKSDFAADGIVR-TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 317
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
+ G + L F ++ SG D + + V C+ + L G QI+ AIK + + V
Sbjct: 318 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 377
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+NA I MY +C + A F + D +SWN+II +G + L LF M +
Sbjct: 378 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 437
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
+PD+ TF +L AC+ L + +K+ + S+ ++D+ + G+I+EA
Sbjct: 438 EPDEFTFGSILKACTGGSLGYGMEIHSSIVKSG--MASNSSVGCSLIDMYSKCGMIEEAE 495
Query: 493 NLLNEI--RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTE 549
+ + RA+ V G + ++HN +R+ E+ + NS +
Sbjct: 496 KIHSRFFQRAN-------VSGTMEELEKMHN---------KRLQEMCVSWNS-----IIS 534
Query: 550 MYLSCGRREDAKRIFAQMKENGV 572
Y+ + EDA+ +F +M E G+
Sbjct: 535 GYVMKEQSEDAQMLFTRMMEMGI 557
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 144/555 (25%), Positives = 237/555 (42%), Gaps = 58/555 (10%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGLM 63
+A + F+ MP RD V+WN M+ GY +NG ++ +F M E D T+ ++
Sbjct: 90 KANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCS 149
Query: 64 QSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
++ ++ G+ VR DVV ++++ Y E+LRVF G+P K+ VSW+
Sbjct: 150 FLEDTSLGMQI-HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWS 208
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA----K 174
+I V + LA +FKEM + + ++R + +L ++ A
Sbjct: 209 AIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS 268
Query: 175 DVQAWNLMIAGYLD--NGCVGV--AEDLFQKMHDRDLTSWKQLINGLVNSRR-IDAAISY 229
D A ++ LD C + A+ LF + + S+ +I G A + +
Sbjct: 269 DFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLF 328
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWT-NVIVG------YFEM 282
+ M S+ V LVK L+ Y + +S + +V V Y +
Sbjct: 329 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKC 388
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
+ A +VF+ M RD WN +I +N G E L FV M S PD TF S+L
Sbjct: 389 QALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 448
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA------LLEFSSV 396
C+ +L G +IH+ +K ++V ++I MY++CG I+ A + ++V
Sbjct: 449 KACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV 507
Query: 397 P--------IHD------IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
+H+ +SWNSII G +E A LF RM PD T+ V
Sbjct: 508 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATV 567
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC--VVDLLGRFG-LIDEAMNLLNEIR 499
L C+ G+ + K + +S Y C +VD+ + G L D + +R
Sbjct: 568 LDTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLR 624
Query: 500 ADGIEVSPTVWGALL 514
D + W A++
Sbjct: 625 RDFV-----TWNAMI 634
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/282 (18%), Positives = 112/282 (39%), Gaps = 62/282 (21%)
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD---- 400
C+ L+LG+Q HA I T V N ++ +Y + SA + F +P+ D
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 401 ---------------------------IISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
++SWNS++ G +G + K++E+F M +
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 434 PDDITFVGVLSACSY--------------------------AGLVD---QGRYYFDCMKN 464
D TF +L CS+ + L+D +G+ + + ++
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 465 -KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI 523
+ + S ++ ++ + L+ A+ E++ VS +++ ++L +C + +
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 524 KVGEIAGERVMELEPNNSGVYLILT-EMYLSCGRREDAKRIF 564
++G ++ + G+ T +MY C +DA+ +F
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILF 297
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 193/648 (29%), Positives = 324/648 (50%), Gaps = 38/648 (5%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGL 62
+A+N+FD +++ V WN M+ G+ +N + A+ +F M + D FT+ +++
Sbjct: 377 SDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGAC 436
Query: 63 MQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ K+V + M++ V N+ + Y G I +A +F +P KD +SW
Sbjct: 437 TYLSSFYLGKQVHCVTIKNCMDISLFVA-NATLDMYSKYGAIGDAKALFSLIPYKDSISW 495
Query: 118 NLVIGALVNCQRMDLAESYFKEMG----ARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
N + L + A K M D S++ +N R E K +
Sbjct: 496 NALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINA-CSNIRATETGKQIHCLAI 554
Query: 174 K-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
K + + +I Y +G V + +F ++ + LI G V + D AI
Sbjct: 555 KYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQ 614
Query: 229 YFKQMPETCEK----TWNSIISVL---IRNGLVKEAHSYLEKYP--YSNIASWTNVIVGY 279
F+Q+ + K T++SI+S + + + K+ H Y K Y + ++ Y
Sbjct: 615 LFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIY 674
Query: 280 FEMGEVGSAIKVF-ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ + A K+ E+ +++ W +I G +N G+ L F +M+ D ATF
Sbjct: 675 LKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATF 734
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP- 397
SVL CSD+ G++IH K + T ++A+I MY++CG++ S+ F +
Sbjct: 735 ASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKN 794
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
DI+ WNS+I G A +GYA++AL LF++M KPD++TF+GVL AC+++GL+ +GR+
Sbjct: 795 KQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRH 854
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI--RADGIEVSPTVWGALLG 515
+F M+ Y L PR HY C +DLLGR G + EA ++++ R DG+ VW L
Sbjct: 855 FFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGV-----VWATYLA 909
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
ACR+H + + G+IA +++ELEP S Y++L+ ++ + G +AK M+E GV K
Sbjct: 910 ACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKF 969
Query: 576 PGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILFDAY 623
PGCSWI + + +FL D HP R+ +L L ++++ D Y
Sbjct: 970 PGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKKDNDIDEY 1017
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 156/607 (25%), Positives = 259/607 (42%), Gaps = 102/607 (16%)
Query: 33 KNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISG 92
K+GF + C + DM+ + +V A+ VFDG+ D + W+SMI+
Sbjct: 186 KSGFSSSVFC---EAALVDMYA---------KCGDVPNARRVFDGIACPDTICWSSMIAC 233
Query: 93 YVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV 152
Y G EAL +F RMD K A D + ++
Sbjct: 234 YHRVGCYQEALALF---------------------SRMD------KMGSAPDQVTLVTII 266
Query: 153 NGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
+ L GR+ A L KMP AWN +I+G+ +G L+ +D+ SW
Sbjct: 267 STLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY-----KDMRSW-- 319
Query: 213 LINGLVNSRRIDAA-ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
GL +R A+ +S M E +V+ +GL +N+
Sbjct: 320 ---GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVM--HGLD------------ANVFV 362
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
+++I Y + G A VF+L +++ +WN M+ G +N+L EE ++ F M
Sbjct: 363 GSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTL 422
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
D TF S+L C+ L + LG+Q+H IK + V+NA + MY++ G I A
Sbjct: 423 QTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKA 482
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
FS +P D ISWN++ GLA + E+A+ + +RMRL PDD++F ++ACS
Sbjct: 483 LFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRA 542
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI----------------------- 488
+ G+ C+ KY + A + ++DL + G +
Sbjct: 543 TETGK-QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIA 601
Query: 489 --------DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEP 538
DEA+ L ++ DG++ S + ++L C N +G+ ++ +
Sbjct: 602 GFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLY 661
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+++ + + L +YL EDA ++ +M ++ E W I G GD S
Sbjct: 662 DDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFE----WTAIISGYAQNGYGDHSLV 717
Query: 599 KFHRLRY 605
F R+R+
Sbjct: 718 SFWRMRH 724
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 212/454 (46%), Gaps = 35/454 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAG 61
+ A+ +FD + DT+ W+ MI Y + G A+ LF++M + D T T+I+
Sbjct: 209 VPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIIST 268
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
L S + A + M V WN++ISG+ +GL L ++ KD+ SW L
Sbjct: 269 LASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY-----KDMRSWGLWP 323
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
S F M S + V EG+ + A + + A +V +
Sbjct: 324 -----------TRSTFASM-----LSAAANMKAFV-EGQQMHAAAVMHGLDA-NVFVGSS 365
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETC 237
+I Y GC A+++F ++++ W ++ G V + + AI F+ M +T
Sbjct: 366 LINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTD 425
Query: 238 EKTWNSII---SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFE 293
E T+ SI+ + L L K+ H K N + Y + G +G A +F
Sbjct: 426 EFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFS 485
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
L+ +D WN + GL +N EE + +M+ G +PD+ +F++ + CS++ +
Sbjct: 486 LIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATET 545
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
G+QIH AIK V +++I +Y++ G+++S+ F+ V I+ N++I G
Sbjct: 546 GKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQ 605
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
+ ++A++LF+++ KP +TF +LS CS
Sbjct: 606 NNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 639
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 130/551 (23%), Positives = 230/551 (41%), Gaps = 83/551 (15%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYN 56
+ R+ A L KMP TV WN +I G+ ++G N + L+ M P R F
Sbjct: 272 SGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASM 331
Query: 57 TVIAGLMQS-----------------DNV----------------QGAKEVFDGMEVRDV 83
A M++ NV AK VFD +++
Sbjct: 332 LSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNI 391
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYFKE 139
V WN+M++G+V N L +EA+R+F M D ++ ++GA L +
Sbjct: 392 VMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQ-VHC 450
Query: 140 MGARDVASWTIMVNGLV-----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ ++ ++ V + G I +A+ LF +P KD +WN + G N
Sbjct: 451 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 510
Query: 195 AEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
A + ++M +T S+ IN N R + T I + I+
Sbjct: 511 AVCMLKRMRLHGITPDDVSFSTAINACSNIRATE---------------TGKQIHCLAIK 555
Query: 251 NGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
G+ SN A +++I Y + G+V S+ K+F + + N +I G
Sbjct: 556 YGIC------------SNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGF 603
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA-RNQF 369
+N+ +E ++ F Q+ + G P + TF+S+L+ CS +G+Q+H +K
Sbjct: 604 VQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDD 663
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMR 428
T + ++ +Y + ++ A + +P H ++ W +II G A +GY + +L F RMR
Sbjct: 664 TLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMR 723
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
+ + D+ TF VL ACS G+ + F +A + ++D+ + G +
Sbjct: 724 HCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETA-TSALIDMYSKCGDV 782
Query: 489 DEAMNLLNEIR 499
+ E++
Sbjct: 783 ISSFEAFKELK 793
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 6/237 (2%)
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
+G PD VL+ CS + L GRQ+H +K + A++ MYA+CG++ +
Sbjct: 152 AGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPN 211
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F + D I W+S+I G ++AL LF RM PD +T V ++S +
Sbjct: 212 ARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS 271
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
+G +D M P + + V+ + GL + L ++R+ G+ + +
Sbjct: 272 SGRLDHATALLKKMPT-----PSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRS 326
Query: 509 VWGALL-GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ ++L A + ++ ++ VM N V L +Y CG DAK +F
Sbjct: 327 TFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF 383
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/531 (32%), Positives = 274/531 (51%), Gaps = 15/531 (2%)
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV-NCQRMDLAESYFKE 139
+D+ +I+ + + A+ VF+ +P +V +N +I A N L + F +
Sbjct: 51 QDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNTSHPSLPFNAFFQ 110
Query: 140 MGAR----DVASWTIMVNGLVREGRIVEARKLFDKMPA----KDVQAWNLMIAGYLDNGC 191
M D ++ ++ + R + + D+ N +I Y G
Sbjct: 111 MQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGS 170
Query: 192 VGV--AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI 249
G+ A LF M +RD+ +W +I GLV ++ A F +MPE +WN+++
Sbjct: 171 AGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPERDMVSWNTMLDGYA 230
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
+ G + A E+ P NI SW+ ++ GY + G++ A +F+ ++V +W +I G
Sbjct: 231 KAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAG 290
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
E E + + +M+E+G PD+ S+L C++ L LG++IHA +
Sbjct: 291 YAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLGLGKRIHASMRRWRFRCG 350
Query: 370 TTVSNAMITMYARCGNIQSALLEFSS-VPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
T V NA I MYA+CG + +A FS + D++SWNS+I G A HG+ EKALELF RM
Sbjct: 351 TKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMV 410
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
F+PD TFVG+L AC++AGLV++GR YF M+ Y + P+ HY C++DLLGR G +
Sbjct: 411 PEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHL 470
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
EA LL R+ +E + + G LL ACR+HN++ E++ ++EP + G Y +L+
Sbjct: 471 KEAFTLL---RSMPMEPNAIILGTLLNACRMHNDVDFARAVCEQLFKVEPTDPGNYSLLS 527
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
+Y G + + QM G +K G S I++ + H F D SHPK
Sbjct: 528 NIYAQAGDWMNVANVRLQMMNTGGQKPSGASSIEVEEEVHEFTVFDQSHPK 578
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 175/372 (47%), Gaps = 47/372 (12%)
Query: 51 DMFTYNTVIAGLMQ--SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
D+F N++I + S + GA +F M+ RDVVTWNSMI G V G ++ A ++F
Sbjct: 154 DIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDE 213
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
MP +D+VSWN ++ MD A F+ M R++ SW+ MV G + G + AR LF
Sbjct: 214 MPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLF 273
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
D+ PAK+V W +IAGY + G V A +L+ KM + L R D +
Sbjct: 274 DRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGL-------------RPDDGFLI 320
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFEMGE 284
SI++ +G++ K H+ + ++ + N + Y + G
Sbjct: 321 --------------SILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGC 366
Query: 285 VGSAIKVFE-LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
+ +A VF +M +DV WN MI G + GE+ L+ F +M G PD TF +L
Sbjct: 367 LDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLC 426
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLEFSSVPI 398
C+ ++ GR+ K+ + V M+ + R G+++ A S+P+
Sbjct: 427 ACTHAGLVNEGRKYFYSMEKV----YGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPM 482
Query: 399 HDIISWNSIICG 410
N+II G
Sbjct: 483 EP----NAIILG 490
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 175/386 (45%), Gaps = 24/386 (6%)
Query: 20 DTVTWNVMIRGYFKNGF--LDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
D N +I Y + G LD AM LF M ERD+ T+N++I GL++ ++GA ++FD
Sbjct: 154 DIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDE 213
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF 137
M RD+V+WN+M+ GY G +D A +F MP +++VSW+ ++ MD+A F
Sbjct: 214 MPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLF 273
Query: 138 KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN----LMIAGYLDNGCVG 193
A++V WT ++ G +G + EA +L+ KM ++ + ++A ++G +G
Sbjct: 274 DRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLG 333
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRR----IDAAISYFK-QMPETCEKTWNSIISVL 248
+ + + M +++N ++ +DAA F M + +WNS+I
Sbjct: 334 LGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGF 393
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF----EMGEVGSAIKVFELMTTRDVTVWN 304
+G ++A + T VG G V K F M V
Sbjct: 394 AMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQ 453
Query: 305 VMIFGLGENDLGEEG-LKFFVQMKESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
V +G + LG G LK + S P P+ ++L C +D R + Q
Sbjct: 454 VEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNACRMHNDVDFARAVCEQLF 513
Query: 363 KIARN---QFTTVSNAMITMYARCGN 385
K+ ++ +SN +YA+ G+
Sbjct: 514 KVEPTDPGNYSLLSN----IYAQAGD 535
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 136/275 (49%), Gaps = 19/275 (6%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
+A + A +LF M +RD VTWN MI G + G L+ A LF++MPERDM ++NT++ G
Sbjct: 170 SAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPERDMVSWNTMLDGY 229
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
++ + A E+F+ M R++V+W++M+ GY G +D A +F P K+VV W +I
Sbjct: 230 AKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIA 289
Query: 123 ALVNCQRMDLAESYF---KEMGARDVASWTIMV------NGLVREGRIVEA--RKLFDKM 171
+ A + +E G R + I + +G++ G+ + A R+ +
Sbjct: 290 GYAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLGLGKRIHASMRRWRFRC 349
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQK-MHDRDLTSWKQLINGLVNSRRIDAAISYF 230
K + A+ I Y GC+ A D+F M +D+ SW +I G + A+ F
Sbjct: 350 GTKVLNAF---IDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELF 406
Query: 231 KQM-PETCEK---TWNSIISVLIRNGLVKEAHSYL 261
+M PE E T+ ++ GLV E Y
Sbjct: 407 SRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYF 441
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 145/290 (50%), Gaps = 32/290 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R ++ A LFD+MP+RD V+WN M+ GY K G +D A LF +MP+R++ +++T++
Sbjct: 199 VRCGELEGACKLFDEMPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVC 258
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-L 119
G + ++ A+ +FD ++VV W ++I+GY G + EA ++ M + +
Sbjct: 259 GYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGF 318
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVAS---W-----TIMVNGLV----REGRIVEARKL 167
+I L C AES +G R AS W T ++N + + G + A +
Sbjct: 319 LISILAAC-----AESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDV 373
Query: 168 FDKMPA-KDVQAWNLMIAGYLDNGCVGVAEDLFQKM----HDRDLTSWKQLINGLVNSRR 222
F M A KDV +WN MI G+ +G A +LF +M + D ++ L+ ++
Sbjct: 374 FSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGL 433
Query: 223 IDAAISYFKQM-------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
++ YF M P+ + + ++ +L R G +KEA + L P
Sbjct: 434 VNEGRKYFYSMEKVYGIVPQV--EHYGCMMDLLGRGGHLKEAFTLLRSMP 481
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/658 (28%), Positives = 318/658 (48%), Gaps = 90/658 (13%)
Query: 43 LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME-VRDVVTWNSMISGYVCNGLIDE 101
L + +RD N+++ + V A+ VFDGM +RD+V+W +M S NG
Sbjct: 75 LRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERG 134
Query: 102 ALRVFHGMPLKDVVSWNLVIGALVN--------CQRMDLAESYFKEMG--ARDVASWTIM 151
+L + M ++ + A + C + +MG DVA + +
Sbjct: 135 SLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGTDVAVGSAL 194
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
++ L R G + ARK+FD + K V W L+I+ Y+ C A +LF + +
Sbjct: 195 IDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDR 254
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEK---TWNSIISVLIRNGLVKE--------AHSY 260
++ ++++ ++ Q+ + ++ +S + + K A+
Sbjct: 255 YTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKV 314
Query: 261 LEKYPYSNIASWTNVIVGYFEMG-EVGSAIKVFELMTTRDV------------------- 300
E+ P +++ SWT +I GY + G + + +F M +
Sbjct: 315 FERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISD 374
Query: 301 --------------------TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP------- 333
TV N ++ E+ EE + F Q+ E P
Sbjct: 375 HDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRD 434
Query: 334 --------------DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
++TF S+++ + + L G+Q+HA ++K VSN++++M
Sbjct: 435 FPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSM 494
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y+RCG ++ A F+ + ++ISW S+I GLA HGYAE+AL LF M LT KP+D+T+
Sbjct: 495 YSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTY 554
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE-- 497
+ VLSACS+ GLV +G+ YF M+ + L PR HY C+VDLL R G++ EA+ +NE
Sbjct: 555 IAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMP 614
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
++AD + VW LLGACR H+NI+VGEI + V+ELEP + Y++L+ +Y G
Sbjct: 615 LKADAL-----VWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLW 669
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
++ RI + M++N + KE G SW+++ + H F +GD+SHP+ + L+ L +I+
Sbjct: 670 DEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIK 727
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 351 LDLGRQIHAQAIK-IARNQFTTVSNAMITMYARCGNIQSALLEFSSVP-IHDIISWNSII 408
L LGR +H + ++ ++ V+N+++T+Y+RCG + SA F + + DI+SW ++
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
LA +G +L L M + P+ T AC
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHAC 161
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 195/695 (28%), Positives = 336/695 (48%), Gaps = 89/695 (12%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------------------- 47
+A ++ +++ V WN+++R + + G LD A+ + +M
Sbjct: 100 SDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKAC 159
Query: 48 ---P-----------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGME---VRDVV 84
P E ++F N ++A +S +++ A VFD + + DV+
Sbjct: 160 GELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVI 219
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPL----------KDVVSWNLVIGALVNCQRMDLAE 134
+WNS+++ +V AL +F M D++S ++ A + + + +
Sbjct: 220 SWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTK 279
Query: 135 ---SYFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
SY G D +++ + G + +A +F+ M KDV +WN M+ GY +G
Sbjct: 280 EIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSG 339
Query: 191 CVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQM----PETCEKTWN 242
G A +LF+ M D+ +W +I G A+ F+QM E T
Sbjct: 340 KFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTII 399
Query: 243 SIISVLIRNGLVK---EAHSY------LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE 293
S++S G + E H+Y L +V + + ++ S + F+
Sbjct: 400 SLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFK 459
Query: 294 LMTT---------RDVTVWNVMIFGLGENDLGEEGLKFFVQM--KESGPSPDNATFTSVL 342
T R+V W VMI G + + LK F +M K +P+ T + +L
Sbjct: 460 AARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCIL 519
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTT--VSNAMITMYARCGNIQSALLEFSSVPIHD 400
C+ L +L +G+QIHA + + + V+N +I MY++CG++ +A F S+P +
Sbjct: 520 MACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRN 579
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+SW S++ G HG ++AL++F++M+ F PDDI+F+ +L ACS++G+VDQG YFD
Sbjct: 580 EVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFD 639
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
M++ Y + + HY CV+DLL R G +D+A + E+ +E S +W ALL ACR+H
Sbjct: 640 IMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEM---PMEPSAAIWVALLSACRVH 696
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
+N+++ E A +++ ++ N G Y +++ +Y + R +D RI MK++G+KK PGCSW
Sbjct: 697 SNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSW 756
Query: 581 IQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+Q G F GD SHP + LL L I+
Sbjct: 757 VQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIK 791
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 120/518 (23%), Positives = 225/518 (43%), Gaps = 60/518 (11%)
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEAL----RVFHGMPLKD 113
V+A + A V + + V WN ++ ++ G +D A+ R+ D
Sbjct: 89 VVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPD 148
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFD 169
+ + A ++ + S + N LV R G + +A +FD
Sbjct: 149 HFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFD 208
Query: 170 KMPAK---DVQAWNLMIAGYLDNGCVGVAEDLFQKM----HDRDLTSWKQLINGLVNSRR 222
++ K DV +WN ++A ++ A DLF +M H++ +I+ +VN
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIIS-IVN--- 264
Query: 223 IDAAISYFKQMPETCEK--------------TWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
I A + K +P+T E N++I + G +K+A + + +
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTR----DVTVWNVMIFGLGENDLGEEGLKFFV 324
+ SW ++ GY + G+ G+A ++F+ M DV W+ +I G + G+E L F
Sbjct: 325 VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK------------IARNQFTTV 372
QM G P++ T S+L+ C+ L L G + HA ++K + V
Sbjct: 385 QMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVV 444
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHD--IISWNSIICGLAYHGYAEKALELFERMRLT 430
NA+I MY++C + ++A F+S+P + +++W +I G A +G + AL+LF M
Sbjct: 445 HNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISK 504
Query: 431 DF--KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT--CVVDLLGRFG 486
+ P+ T +L AC++ + G+ ++ S ++ C++D+ + G
Sbjct: 505 PYAVAPNAYTISCILMACAHLSSLRMGK-QIHAYVTRHHEYESSVYFVANCLIDMYSKCG 563
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
+D A N+ + + EVS W +++ +H K
Sbjct: 564 DVDTARNVFDSMPKRN-EVS---WTSMMSGYGMHGRGK 597
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 180/448 (40%), Gaps = 88/448 (19%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+++A N+F+ M +D V+WN M+ GY ++G A LF M + D+ T++ VIAG
Sbjct: 310 MKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAG 369
Query: 62 LMQSDNVQGAKEVFDGMEV----RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD---- 113
Q Q A + F M + + VT S++S G + + + H LK
Sbjct: 370 YAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMET-HAYSLKKCLLS 428
Query: 114 -------------VVSWNLVIGALVNCQRMDLAESYFKEMG--ARDVASWTIMVNGLVRE 158
+V N +I C+ A + F + R+V +WT+M+ G +
Sbjct: 429 LDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQY 488
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G +A KLF +M +K + + Y + C+ L H L KQ+ +
Sbjct: 489 GDSNDALKLFSEMISK---PYAVAPNAYTIS-CI-----LMACAHLSSLRMGKQIHAYVT 539
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
++++ YF N +I + + G V A + + P N SWT+++ G
Sbjct: 540 RHHEYESSV-YF---------VANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSG 589
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y G + G+E L F +M+++G PD+ +F
Sbjct: 590 Y-------------------------------GMHGRGKEALDIFDKMQKAGFVPDDISF 618
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA-----MITMYARCGNIQSALLEF 393
+L CS +D G I R+ + +++A +I + AR G + A
Sbjct: 619 LVLLYACSHSGMVDQGLDY----FDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTI 674
Query: 394 SSVPIHDIIS-WNSIICGLAYHGYAEKA 420
+P+ + W +++ H E A
Sbjct: 675 QEMPMEPSAAIWVALLSACRVHSNVELA 702
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 125/298 (41%), Gaps = 32/298 (10%)
Query: 224 DAAISYFKQMPETCEK--TWNSIISVLIRNGLVKEAHSYLE-------KYPYSNIASW-T 273
D + ++F + + C T I +I GL+ S L + Y + S T
Sbjct: 28 DVSPTHFASLLKECRSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGT 87
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
V+ Y G A+ V E + WN+++ E + + +M +G P
Sbjct: 88 GVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKP 147
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMYARCGNIQSAL 390
D+ T L C +LP+ G H I N F + V NA++ MY+R G+++ A
Sbjct: 148 DHFTLPYALKACGELPSYRSGSAFHGL---ICCNGFESNVFVCNALVAMYSRSGSLEDAS 204
Query: 391 LEFSSVP---IHDIISWNSIICGLAYHGYAEKALELFERM------RLTDFKPDDITFVG 441
L F + I D+ISWNSI+ AL+LF M + T+ + D I+ V
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264
Query: 442 VLSAC-SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC--VVDLLGRFGLIDEAMNLLN 496
+L AC S L + ++N F + C ++D + G + +A+N+ N
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADA----FVCNALIDTYAKCGSMKDAVNVFN 318
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+ A+N+FD MP+R+ V+W M+ GY +G A+ +F++M + D ++ ++
Sbjct: 565 VDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYA 624
Query: 62 LMQSDNVQGAKEVFDGME-----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
S V + FD M + + +I +G +D+A + MP++ +
Sbjct: 625 CSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAA 684
Query: 117 -WNLVIGALVNCQRMDLAESYFKE---MGARDVASWTIMVNGLVREGR---IVEARKLFD 169
W ++ A ++LAE + M A + S+T++ N R + R+L
Sbjct: 685 IWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMK 744
Query: 170 K 170
K
Sbjct: 745 K 745
>gi|297604972|ref|NP_001056430.2| Os05g0581300 [Oryza sativa Japonica Group]
gi|255676606|dbj|BAF18344.2| Os05g0581300 [Oryza sativa Japonica Group]
Length = 704
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 202/656 (30%), Positives = 310/656 (47%), Gaps = 54/656 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PERDMFT 54
R++R+ +A LFD MP+RD V + ++ G+ G AM LF+++ D F
Sbjct: 13 RSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRLRASSPPLAPADPFV 72
Query: 55 YNTVIAGLMQSDNVQ-----GAKEVFD--GMEVRDVVTWNSMISGYVCNGLIDEALRVFH 107
+ V + + + + F V V ++ Y G + AL+VF
Sbjct: 73 LSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKAGCLGLALKVFD 132
Query: 108 GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV---------ASWTIMVNGLVRE 158
MP K+VVSW ++ +L R A F EM A V A GL+
Sbjct: 133 EMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAGLLSR 192
Query: 159 GRIVEA--RKL-FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
GR V A KL D P N + Y V A +M RD+ +W +I+
Sbjct: 193 GREVHAFCAKLGLDSTP----YVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVIS 248
Query: 216 GLVNSRRIDAAISYFKQM--------PETCEKTWNSIISVLIRNGLV---KEAHSYLEKY 264
V + R AI F +M E T+ ++I+ V ++ H+ +
Sbjct: 249 AYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARK 308
Query: 265 PYSNIASWTNVIVGYF--EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
++ S N +V + G + +A VF +DV W+ +I G + L E+
Sbjct: 309 GFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFAL 368
Query: 323 FVQMKE-SG-PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F +M+ SG P P+ T S+L++C+ +LD GRQ+H A+ + +A+I MY
Sbjct: 369 FREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMY 428
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+ G++ A + FS D++SW ++I G A HG+++KALELF+ M KPD +TF+
Sbjct: 429 GKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFI 488
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
GVL+AC +AG V+ G Y + M Y L P HY CVVDLLGR G I+EA L+ +I A
Sbjct: 489 GVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIGKIAA 548
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
+ E VW +LL AC + G+ A ER ME EP +G ++ + +Y S G+ +A
Sbjct: 549 N--ERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMANLYASKGQWHEA 606
Query: 561 KRIFAQMKENGVKKEPGCSWIQINDGGH-----VFLSGDSSHPKFHRLRYLLNLLH 611
+ MK+ GV K G W I GG VF++ D +HP+ + +L L++
Sbjct: 607 AQERHMMKQKGVVK--GAGWSSITVGGEGRRVGVFVASDRTHPQDSAIYRMLELIY 660
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 197/684 (28%), Positives = 328/684 (47%), Gaps = 97/684 (14%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMI---------------------RGYFKNGFLDNAMCL- 43
+ +A +FD++ +RD V+WN +I G+ + F +M L
Sbjct: 63 LGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALA 122
Query: 44 FNQMPERD-------------------MFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
+ + +RD F+ N ++A + + AK + E RD+V
Sbjct: 123 CSNLRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLV 182
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA-LVNCQRMDLAESYFKEMGAR 143
TWNSMIS + N EAL M L+ V + + L C +DL
Sbjct: 183 TWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDL----------- 231
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
+R G+ + A L ++ + ++ Y + G V +F +
Sbjct: 232 ------------LRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVL 279
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSIISVLIR-NGLVKEA 257
DR + W +I G S + A+ F +M T +SI+ +R G+ ++
Sbjct: 280 DRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKE 339
Query: 258 --HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
H Y+ K N ++ Y MG++ ++ ++F+ M RD+ WN +I
Sbjct: 340 GIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICG 399
Query: 315 LGEEGLKFFVQM----------------KESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
+ L +M K+ P++ T +VL C+ L L G++IH
Sbjct: 400 RSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIH 459
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
A AI+ TV +A++ MYA+CG + A F +PI ++I+WN II HG +
Sbjct: 460 AYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGK 519
Query: 419 KALELFERM-----RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSA 473
++LELFE M + + KP ++TF+ + ++CS++G+VD+G F MKN++ ++P
Sbjct: 520 ESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPD 579
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV 533
HY C+VDL+GR G ++EA L+N + + +V W +LLGACRI++NI++GEIA E +
Sbjct: 580 HYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVG--AWSSLLGACRIYHNIEIGEIAAENL 637
Query: 534 MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSG 593
++L+P+ + Y++L+ +Y S G + A + +MK GVKKEPGCSWI+ D H FL+G
Sbjct: 638 LQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAG 697
Query: 594 DSSHPKFHRLRYLLNLLHTEIERE 617
D SHP+ +L L L +++E
Sbjct: 698 DLSHPQSEKLHDFLETLSERLKKE 721
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 126/261 (48%), Gaps = 15/261 (5%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETCE 238
N ++ Y G +G A +F ++ +RD SW +I+ L + AI F+ M E E
Sbjct: 51 NTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFE 110
Query: 239 KTWNSIISVLI-------RNG--LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
+ +++S+ + R+G L K+ H + + S ++ Y ++G + A
Sbjct: 111 PSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAK 170
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
+ L RD+ WN MI +N+ E L F M G PD TF SVL CS L
Sbjct: 171 SLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLD 230
Query: 350 TLDLGRQIHAQAIK---IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
L G++IHA A++ + N F V +A++ MY CG ++S L F SV I WN+
Sbjct: 231 LLRTGKEIHAYALRTDDVIENSF--VGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNA 288
Query: 407 IICGLAYHGYAEKALELFERM 427
+I G A + EKAL LF M
Sbjct: 289 MIAGYAQSEHDEKALMLFIEM 309
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 124/575 (21%), Positives = 221/575 (38%), Gaps = 129/575 (22%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI 59
R+ +A++L RD VTWN MI + +N A+ M + D T+ +V+
Sbjct: 164 GRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVL 223
Query: 60 AGLMQSDNVQGAKE------------------------------------VFDGMEVRDV 83
D ++ KE VFD + R +
Sbjct: 224 PACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKI 283
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMP-----LKDVVSWNLVIGALVNCQRMDLAESYFK 138
WN+MI+GY + ++AL +F M + + + ++ A V C+ + E
Sbjct: 284 GLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHG 343
Query: 139 EMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ R + + + N L+ R G I ++++FD M +D+ +WN +I Y+ G
Sbjct: 344 YVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYV---ICGR 400
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
+ D +H+ K +G N KQ+P NSI + + G
Sbjct: 401 SSDALLLLHEMQRIEEKSTYDGDYNDE---------KQVPFKP----NSITLMTVLPGCA 447
Query: 255 --------KEAHSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV 305
KE H+Y + S + + ++ Y + G + A +VF+ M R+V WNV
Sbjct: 448 SLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNV 507
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGP-----SPDNATFTSVLTICSDLPTLDLGRQI--- 357
+I G + G+E L+ F M G P TF ++ CS +D G +
Sbjct: 508 IIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHK 567
Query: 358 --HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP--IHDIISWNSIICGLAY 413
+ I+ A + + + + + R G ++ A +++P + +W+S+
Sbjct: 568 MKNEHGIEPAPDHYACI----VDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSL------ 617
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR-S 472
L AC ++ G +N LQP +
Sbjct: 618 -----------------------------LGACRIYHNIEIGEI---AAENLLQLQPDVA 645
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
+HY + ++ GL D+AMNL ++A G++ P
Sbjct: 646 SHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEP 680
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 9/211 (4%)
Query: 253 LVKEAHSYLEKYPYSNIASWT--NVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
L K+ H+++ K+ Y + +S T N +V Y + G +G A KVF+ +T RD WN +I
Sbjct: 28 LGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISA 87
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD---LGRQIHAQAIKIAR 366
L + E +K F M G P + T S+ CS+L D LG+QIH + +
Sbjct: 88 LCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFR--K 145
Query: 367 NQFTTVS-NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
+ T S NA++ MYA+ G + A D+++WNS+I + + +AL
Sbjct: 146 GHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLR 205
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
M L KPD +TF VL ACS+ L+ G+
Sbjct: 206 LMVLEGVKPDGVTFASVLPACSHLDLLRTGK 236
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 120/278 (43%), Gaps = 42/278 (15%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT--TVSNAMITMYARC 383
M SG SPDN F +VL + + L LG+QIHA K F+ T+ N ++ MY +C
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G + A F + D +SWNSII L E A++ F M + F+P T V +
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 444 SACS----YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL---- 495
ACS GL + + C + ++ R+ ++ + + G +D+A +LL
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKGHW---RTFSNNALMAMYAKLGRLDDAKSLLVLFE 177
Query: 496 ----------------NE-----------IRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
NE + +G++ + ++L AC + ++ G+
Sbjct: 178 DRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKE 237
Query: 529 AGERVMELEP--NNSGVYLILTEMYLSCGRREDAKRIF 564
+ + NS V L +MY +CG+ E + +F
Sbjct: 238 IHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVF 275
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 125/322 (38%), Gaps = 89/322 (27%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM---PERDMF----- 53
R I+ ++ +FD M RD V+WN +I Y G +A+ L ++M E+ +
Sbjct: 366 RMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYN 425
Query: 54 ------------TYNTVIAGLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNG 97
T TV+ G + KE+ + V ++++ Y G
Sbjct: 426 DEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCG 485
Query: 98 LIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR 157
++ A RVF MP+++V++WN++ IM G+
Sbjct: 486 CLNLARRVFDQMPIRNVITWNVI-----------------------------IMAYGMHG 516
Query: 158 EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL 217
+G+ E+ +LF+ M A+ + G V E ++ L
Sbjct: 517 KGK--ESLELFEDMVAEGAKG-----------GEVKPTE-----------VTFIALFASC 552
Query: 218 VNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYP--YSNIA 270
+S +D +S F +M E + I+ ++ R G V+EA+ + P + +
Sbjct: 553 SHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVG 612
Query: 271 SWTNV-----IVGYFEMGEVGS 287
+W+++ I E+GE+ +
Sbjct: 613 AWSSLLGACRIYHNIEIGEIAA 634
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 187/636 (29%), Positives = 315/636 (49%), Gaps = 51/636 (8%)
Query: 6 IQEAQNLFDKMPQR---DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTV 58
+ +AQ +F+ P + + WN ++R +G+ + A+ ++ +M + D FT+ V
Sbjct: 82 VSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLV 141
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWN-----SMISGYVCNGLIDEALRVFHGMPLKD 113
I + + + V G V WN ++ Y G +D+A +VF M ++
Sbjct: 142 IRACALMGSRKLCRSV-HGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRS 200
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLFD 169
VSWN ++ A F+ MG+ ++ +WT +++ R G+ VE +LF
Sbjct: 201 CVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFG 260
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+M + + A +A L V V F + ++I+G V
Sbjct: 261 RMRMRGIGATAEALAVVLS---VSVDLAAFDE---------GKVIHGYV----------- 297
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
K E NS+I + ++G V A + NI SW +I Y ++G A
Sbjct: 298 VKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAF 357
Query: 290 KVFELMTTRD--------VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
+F + D V W+ +I G GEE L+ F +M+ + ++ T SV
Sbjct: 358 AIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASV 417
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L++C++L L LGR+IH ++ + V N +I MY + G+ + L F + D+
Sbjct: 418 LSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDL 477
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
ISWN+++ G HG E A+ F++M F+PD +TFV VLSACS+AGLV +GR FD
Sbjct: 478 ISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDK 537
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
M ++ ++P+ HY C+VDLLGR GL+ EA + +++ +E + VWGALL +CR+H
Sbjct: 538 MIKEFRVEPQMEHYACMVDLLGRAGLLQEASKV---VKSMPVEPNACVWGALLNSCRMHK 594
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
N +V E ++ L +G Y++L+ +Y + GR ED+ ++ K G+KK PG SWI
Sbjct: 595 NTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWI 654
Query: 582 QINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
Q+ ++F +G++ H + + +L L ++E E
Sbjct: 655 QVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVE 690
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 191/445 (42%), Gaps = 53/445 (11%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
R+ +A+ +F++M R V+WN M+ GY N A +F M AGL
Sbjct: 184 GRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGS----------AGLE 233
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNL 119
++VTW S++S + G E + +F M ++ + + +
Sbjct: 234 P-----------------NLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAV 276
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKD 175
V+ V+ D + + ++ + N L+ + G + AR LF ++ K+
Sbjct: 277 VLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKN 336
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRD--------LTSWKQLINGLVNSRRIDAAI 227
+ +WN +I+ Y D G A +F ++ D + SW +I G + + + A+
Sbjct: 337 IVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEAL 396
Query: 228 SYFKQMPETCEK----TWNSIISV---LIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGY 279
F++M K T S++SV L L +E H ++ + NI +I Y
Sbjct: 397 ELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMY 456
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G VFE + +D+ WN M+ G G + LGE ++ F QM + G PD TF
Sbjct: 457 TKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFV 516
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA-MITMYARCGNIQSALLEFSSVPI 398
+VL+ CS + GR++ + IK R + A M+ + R G +Q A S+P+
Sbjct: 517 AVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPV 576
Query: 399 H-DIISWNSIICGLAYHGYAEKALE 422
+ W +++ H E A E
Sbjct: 577 EPNACVWGALLNSCRMHKNTEVAEE 601
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 127/299 (42%), Gaps = 7/299 (2%)
Query: 275 VIVGYFEMGEVGSAIKVFELMTTR---DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
V+ Y G V A +VFE+ ++ +WN ++ + EE L+ + +M++ G
Sbjct: 72 VVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGV 131
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
S D TF V+ C+ + + L R +H +++ V N ++ MY + G + A
Sbjct: 132 SADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARK 191
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F + + +SWN+++ G A + A E+F M +P+ +T+ +LS+ + G
Sbjct: 192 VFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQ 251
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
+ F M+ + A V+ + DE + + G E V
Sbjct: 252 HVETMELFGRMRMRGIGATAEA-LAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKN 310
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
+L+ H N+ I +E++ N + L Y G ++A IF Q+++
Sbjct: 311 SLICLYGKHGNVNAARIL---FLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKT 366
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F +L CS L +QIH+Q I ++ ++ ++++YA G + A F P
Sbjct: 37 FNDLLQQCSKS---HLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSP 93
Query: 398 IH---DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
I +++ WNSI+ HGY E+ALE++ RMR D TF V+ AC+ G
Sbjct: 94 IECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMG 149
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 18/141 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
++ +E +F+K+ +D ++WN M+ GY +G +NA+ F+QM E D T+
Sbjct: 458 KSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVA 517
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
V++ + V +E+FD M +++ M Y C GL+ EA +V MP
Sbjct: 518 VLSACSHAGLVAEGRELFDKM-IKEFRVEPQM-EHYACMVDLLGRAGLLQEASKVVKSMP 575
Query: 111 LK-DVVSWNLVIGALVNCQRM 130
++ + W GAL+N RM
Sbjct: 576 VEPNACVW----GALLNSCRM 592
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/574 (31%), Positives = 293/574 (51%), Gaps = 39/574 (6%)
Query: 53 FTYNT-VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-- 109
F NT +I + ++ VFD + +++ WN+++S Y N L ++A+ +F +
Sbjct: 141 FVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELIS 200
Query: 110 ---PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIV 162
D + VI A + L + D+ S + N L+ + G +
Sbjct: 201 VTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVE 260
Query: 163 EA-RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL-TSWKQLINGLVNS 220
EA +++FD M K V +WN ++ GY N A DL+ +M D L W + + L+
Sbjct: 261 EAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 320
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
R+ ++ Y ++ I +RNGL + P+ I+ ++ Y
Sbjct: 321 SRM-KSLHYGEE-----------IHGFALRNGLAVD--------PFIGIS----LLSLYI 356
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
G+ +A +F+ M R + WNVMI G +N L +E + F QM G P
Sbjct: 357 CCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMC 416
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
V CS L L LG+++H A+K + VS+++I MYA+ G I + F + D
Sbjct: 417 VCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKD 476
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+ SWN II G HG ++ALELFE+M KPDD TF G+L ACS+AGLV+ G YF+
Sbjct: 477 VASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFN 536
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
M N + ++P+ HYTCVVD+LGR G ID+A+ L+ E+ D +W +LL +CRIH
Sbjct: 537 QMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD---PDSRIWSSLLSSCRIH 593
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
N+ +GE +++ELEP Y++++ ++ G+ +D +R+ +MK+ G++K+ GCSW
Sbjct: 594 GNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSW 653
Query: 581 IQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
I++ H FL GD P+ +R L +I
Sbjct: 654 IEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKI 687
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 139/557 (24%), Positives = 233/557 (41%), Gaps = 101/557 (18%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVI-- 59
+++ +FDK+ +++ WN ++ Y +N ++AM +F+++ + D FT VI
Sbjct: 158 SDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKA 217
Query: 60 -AGLMQ-----------------SDNVQG----------------AKEVFDGMEVRDVVT 85
AGL+ SD G K VFD M+ + V +
Sbjct: 218 CAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSS 277
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMDLAESYFKEMG--- 141
WN+++ GY N +AL ++ M + W + L+ C RM + Y +E+
Sbjct: 278 WNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMK-SLHYGEEIHGFA 336
Query: 142 -----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
A D +++ + G+ A+ LFD M + + +WN+MIAGY NG A
Sbjct: 337 LRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAI 396
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
+LF++M + ++ I C S +S L L KE
Sbjct: 397 NLFRQMLSDGIQPYEIAI---------------------MCVCGACSQLSAL---RLGKE 432
Query: 257 AHSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
H + L+ + +I +++I Y + G +G + ++F+ + +DV WNV+I G G +
Sbjct: 433 LHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGR 492
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR-----NQFT 370
G+E L+ F +M G PD+ TFT +L CS ++ G + Q + + +T
Sbjct: 493 GKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYT 552
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHG-------YAEKALE 422
V + M R G I AL +P D W+S++ HG A K LE
Sbjct: 553 CV----VDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLE 608
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
L KP++ + L A S G D R MK+ + + V +
Sbjct: 609 LEPE------KPENYVLISNLFAGS--GKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKV 660
Query: 483 GRFGLIDEAMNLLNEIR 499
F + DE + L E+R
Sbjct: 661 HNFLIGDEMLPELEEVR 677
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 154/344 (44%), Gaps = 58/344 (16%)
Query: 6 IQEA-QNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVI- 59
++EA + +FD M + +WN ++ GY +N A+ L+ QM + D FT +++
Sbjct: 259 VEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLL 318
Query: 60 -----AGLMQSDNVQG-----------------------------AKEVFDGMEVRDVVT 85
L + + G A+ +FDGME R +V+
Sbjct: 319 ACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVS 378
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI----GALVNCQRMDLAESY----F 137
WN MI+GY NGL DEA+ +F M + + + I GA + L +
Sbjct: 379 WNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFAL 438
Query: 138 KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
K D+ + +++ + G I ++++FD++ KDV +WN++IAGY +G A +
Sbjct: 439 KAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALE 498
Query: 198 LFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQM-----PETCEKTWNSIISVL 248
LF+KM L ++ ++ ++ ++ + YF QM E + + ++ +L
Sbjct: 499 LFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDML 558
Query: 249 IRNGLVKEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKV 291
R G + +A +E+ P + W++++ G +G KV
Sbjct: 559 GRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKV 602
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 197/638 (30%), Positives = 325/638 (50%), Gaps = 33/638 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------DMFTYNTVI 59
+ EA LFDKMP+++ ++WN +IRG+ +NGF A F + E D+ T T++
Sbjct: 261 LDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLL 320
Query: 60 AGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
NV V GM V+ +++ N++I Y G + EA +F + K V
Sbjct: 321 PVCSGEGNVD-VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSV 379
Query: 115 VSWNLVIGALVN----CQRMDLAESYFKEMGARDVASWTIM--VNGLVREGRIVEARKLF 168
VSWN +IGA + DL + E +V TI+ + + E ++ R L
Sbjct: 380 VSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALH 439
Query: 169 DKMPAKDVQAWNLM----IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV-NSRRI 223
Q L+ IA Y G + AE +F M+ + ++SW +I G N I
Sbjct: 440 GYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPI 499
Query: 224 DAAISYFKQMPETCEKTWNSIISVLI---RNGLV---KEAHSYLEKYPYS-NIASWTNVI 276
A YF+ SI+S+L+ R GL+ KE H ++ + N +++
Sbjct: 500 KALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLL 559
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
YF + FE M ++ WN M+ G +N+L E L F QM G PD
Sbjct: 560 SLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEI 619
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
S+L CS L L LG+++H A+K + + V+ +++ MYA+ G + + F+ +
Sbjct: 620 AIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRL 679
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
++ SWN +I G HG KA+ELFE M+ +D +PD TF+GVL AC +AGLV +G
Sbjct: 680 NGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGL 739
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
Y M+ Y L+P HY CV+D+LGR G ++EA+N +NE+ E +W +LL +
Sbjct: 740 NYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPE---EPDAKIWSSLLSS 796
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
+ ++++GE E+++ LE N + Y++L+ +Y + G+ + + + +MK+ ++K+
Sbjct: 797 SITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDV 856
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
GCSWI++ + F++G++S+P +R + N L +I
Sbjct: 857 GCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQI 894
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 128/546 (23%), Positives = 236/546 (43%), Gaps = 42/546 (7%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-----ERDMFTYNTVIAGL 62
E++ +FD++ ++ WN ++ GY +N D A+ F ++ + D FT+ +I
Sbjct: 161 ESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKAC 220
Query: 63 MQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
++ K V GM V+ D+ N+MI+ Y G +DEA+ +F MP ++++SW
Sbjct: 221 TGKCDIHLGKSV-HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISW 279
Query: 118 NLVIGALVNCQRMDLAESYFKEMGAR------DVASWTIMVNGLVREGRIVEARKLFDKM 171
N +I A F+ + DVA+ ++ EG V+ + M
Sbjct: 280 NSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGN-VDVGMVIHGM 338
Query: 172 PAK-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
K ++ N +I Y GC+ A LF+K+ ++ + SW +I +
Sbjct: 339 AVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFET 398
Query: 227 ISYFKQM------PETCEKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNV-I 276
++M E E T +++ + ++ H Y ++ + N I
Sbjct: 399 FDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFI 458
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A VF M T+ V+ WN +I G +N + L F+ +M G PD+
Sbjct: 459 AAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDF 518
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ S+L C L L G++IH ++ + N F VS ++++Y C F
Sbjct: 519 SIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVS--LLSLYFHCSKPFYGRTYFE 576
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+ + + WN+++ G + + +AL LF +M +PD+I +L ACS +
Sbjct: 577 RMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGL 636
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
G+ C K L + ++D+ + G + + + N R +G EV+ W ++
Sbjct: 637 GK-EVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFN--RLNGKEVAS--WNVMI 691
Query: 515 GACRIH 520
+H
Sbjct: 692 TGFGVH 697
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 8/247 (3%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGP 331
T +I Y G + VF+ + +++ WN ++ G N+L +E + F+++ +
Sbjct: 147 TRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEF 206
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
PDN TF ++ C+ + LG+ +H A+K+ V NAMI +Y +CG + A+
Sbjct: 207 QPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVE 266
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT--DFKPDDITFVGVLSACSYA 449
F +P ++ISWNS+I G + +G+ +A F + + PD T V +L CS
Sbjct: 267 LFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGE 326
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
G VD G M K L ++D+ + G + EA L +I +
Sbjct: 327 GNVDVGMVIHG-MAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSV----VS 381
Query: 510 WGALLGA 516
W +++GA
Sbjct: 382 WNSMIGA 388
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFT---TVSNAMITMYARCGNIQSALLEFSSVP 397
+L C +++GR++ + +QF+ ++ +ITMY+ CG + L F +
Sbjct: 113 LLQKCGQYKNVEIGRKL--DEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLL 170
Query: 398 IHDIISWNSIICGLAYHGYAEKALELF-ERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
++ WN+++ G + ++A+ F E + +T+F+PD+ TF ++ AC+ + G+
Sbjct: 171 NKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGK 230
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
M K L ++ L G+ G +DEA+ L +++
Sbjct: 231 SVHG-MAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKM 271
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 258/465 (55%), Gaps = 11/465 (2%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
G I EA F+ MP +++ + N++I G++ +G + A +F +M +R++ +W +++GL+
Sbjct: 6 GEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLI 65
Query: 219 NSRRIDAAISYFKQMPETC----EKTWNSII---SVLIRNGLVKEAHSYLEKYPYS-NIA 270
+ + F++M E E T S++ + L + K+ H+Y+ KY Y N+
Sbjct: 66 QFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLV 125
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
+++ Y + G +G KV + M R+V WN +I G +N E L + MK SG
Sbjct: 126 VGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSG 185
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
PD T SV++ ++L TL G+QIHA+AIK N V +++I+MY++CG ++ ++
Sbjct: 186 LRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSM 245
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
D + W+S+I +HG E+A+ LFE+M +D+TF+ +L ACS+ G
Sbjct: 246 KALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNG 305
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVW 510
L ++G +F M KY L+PR HYTCVVDLLGR G +DEA + IR+ +E +W
Sbjct: 306 LKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAM---IRSMPLEADVVIW 362
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
LL ACRIH N + E ++ L P +S Y++L+ ++ S R +D ++ M++
Sbjct: 363 KTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDR 422
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
VKKEPG SW+++ + F GD SHP + L L E++
Sbjct: 423 NVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELMEEMK 467
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 138/307 (44%), Gaps = 62/307 (20%)
Query: 279 YFEMGEV-------------------------------GSAIKVFELMTTRDVTVWNVMI 307
YF+MGE+ SAIKVF+ M R+V WN M+
Sbjct: 2 YFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMV 61
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
GL + + E GL F +M E G PD T SVL C+ L G+Q+HA +K
Sbjct: 62 SGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYE 121
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
V +++ MY + G++ ++ I ++++WN++I G A +G+ E L+L+ M
Sbjct: 122 FNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMM 181
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYF-------------------------DCM 462
+++ +PD IT V V+S+ + + QG+ C+
Sbjct: 182 KMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCL 241
Query: 463 KN--KYFL---QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
++ K L P S ++ ++ G G +EA++L ++ +G+ + + +LL AC
Sbjct: 242 EDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYAC 301
Query: 518 RIHNNIK 524
HN +K
Sbjct: 302 S-HNGLK 307
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 184/426 (43%), Gaps = 46/426 (10%)
Query: 31 YFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMI 90
YFK G + A+ FN MP R++ ++N +I G +Q ++ A +VFD M R+V TWN+M+
Sbjct: 2 YFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMV 61
Query: 91 SGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV-NCQRMDLA------ESYFKEMGAR 143
SG + + L +F M + +G+++ C + + +Y + G
Sbjct: 62 SGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYE 121
Query: 144 -DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
++ + + + ++ G + E K+ M ++V AWN +IAG NG DL+ M
Sbjct: 122 FNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMM 181
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETCEKTWNSIISVLIRNGLVKEAHSYL 261
L K + +++S A + +Q+ E + NS ++VL
Sbjct: 182 KMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVL------------- 228
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
+++I Y + G + ++K D +W+ MI G + GEE +
Sbjct: 229 -----------SSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVH 277
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR-----QIHAQAIKIARNQFTTVSNAM 376
F QM++ G ++ TF S+L CS + G + +K +T V
Sbjct: 278 LFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCV---- 333
Query: 377 ITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFER-MRLTDFKP 434
+ + R G + A S+P+ D++ W +++ H A+ A E +RL
Sbjct: 334 VDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLN--PQ 391
Query: 435 DDITFV 440
D T+V
Sbjct: 392 DSATYV 397
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 143/335 (42%), Gaps = 61/335 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYN 56
+++ + A +FD+M +R+ TWN M+ G + F +N + LF +M E D FT
Sbjct: 34 VQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLG 93
Query: 57 TVI---AGL--------------------------------MQSDNVQGAKEVFDGMEVR 81
+V+ AGL M+S ++ ++V M +R
Sbjct: 94 SVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIR 153
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLK----------DVVSWNLVIGALVNCQRMD 131
+VV WN++I+G NG + L +++ M + V+S + + L Q++
Sbjct: 154 NVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIH 213
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
AE+ K VA + +++ + G + ++ K D W+ MIA Y +G
Sbjct: 214 -AEA-IKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGR 271
Query: 192 VGVAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMPETCE-----KTWN 242
A LF++M L ++ L+ ++ + + +FK M E + +
Sbjct: 272 GEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYT 331
Query: 243 SIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVI 276
++ +L R+G + EA + + P +++ W ++
Sbjct: 332 CVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLL 366
>gi|222635245|gb|EEE65377.1| hypothetical protein OsJ_20684 [Oryza sativa Japonica Group]
Length = 769
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/481 (34%), Positives = 260/481 (54%), Gaps = 28/481 (5%)
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPA-----KDVQAWNLMIAGYLDNGCVGV 194
M A+D AS + MV+G + G + EA +L K + K V A+N +I Y G
Sbjct: 1 MPAKDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSD 60
Query: 195 AEDLF--------------QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
A+ LF +K +R++ SW ++ + + + +A + F +MP+ +
Sbjct: 61 AKRLFDMIPKGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVS 120
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
WN++IS + +KE+ + P + SW +I G+ + GE A F+ M R
Sbjct: 121 WNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGT 180
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
WN MI G +N +K F +M E G PD TF+SVL C+ +P L LG QIH Q
Sbjct: 181 ISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPMLGLGAQIH-Q 239
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEK 419
++ + T +SNA+ITMY+RCG + A F + D++SWN++I +HG A K
Sbjct: 240 LVEKSFVPDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATK 299
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
AL+LF+ MR P ITFV +LSAC AGLV +GR FD M ++Y + R HY +V
Sbjct: 300 ALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVFDTMVHEYGIVARIEHYAALV 359
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSP--TVWGALLGACRIHNNIKVGEIAGERVMELE 537
+L+GR G +D+A+ ++N + ++P +VWGA LGAC N + ++A + + +
Sbjct: 360 NLIGRHGQLDDALEVIN-----SMPMAPDRSVWGAFLGACTAKKNEPLAQMAAKELSTIN 414
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
P++S Y+++ ++ G+ A + +M+ G+ K+PG SWI + HVF+SGD+ H
Sbjct: 415 PDSSAPYVLIHNLHAHEGKWGSAAVVREEMERQGIYKQPGYSWIDLEGKMHVFISGDTWH 474
Query: 598 P 598
P
Sbjct: 475 P 475
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 185/409 (45%), Gaps = 55/409 (13%)
Query: 16 MPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVIAGLMQSDNVQG 70
MP +D+ + + M+ G+ KNG L A L + ++ + YNT+I Q+
Sbjct: 1 MPAKDSASLSTMVSGFTKNGMLHEAEELLTKRLSVTDMDKAVDAYNTLIVAYGQAGRFSD 60
Query: 71 AKEVFD---------------GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
AK +FD G E R+VV+WNSM+ Y+ G + A +F+ MP KD+V
Sbjct: 61 AKRLFDMIPKGQYQHNMLKRKGFE-RNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLV 119
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
SWN +I M +E F EM D SW +++ G +++G AR FD+MP +
Sbjct: 120 SWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERG 179
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
+WN MI+GY NG + LF KM L G + R F +
Sbjct: 180 TISWNTMISGYEKNGNYISSVKLFSKM----------LEVGEIPDRHT------FSSVLA 223
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
C + I +L GL + H +EK + A +I Y G + A +F+ M
Sbjct: 224 AC-----ASIPML---GLGAQIHQLVEKSFVPDTAISNALITMYSRCGALNDAEAIFKQM 275
Query: 296 -TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
T +D+ WN +I + + L+ F +M+ + P + TF S+L+ C + + G
Sbjct: 276 HTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEG 335
Query: 355 R-----QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
R +H I +AR + A++ + R G + AL +S+P+
Sbjct: 336 RMVFDTMVHEYGI-VARIEHYA---ALVNLIGRHGQLDDALEVINSMPM 380
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 140/317 (44%), Gaps = 49/317 (15%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ LF++MP +D V+WN MI GY + + + LF +MP+ D ++N +I G MQ
Sbjct: 106 ARALFNEMPDKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEA 165
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGAL 124
+ A+ FD M R ++WN+MISGY NG ++++F M + D +++ V+ A
Sbjct: 166 EHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAAC 225
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
+ + L + +L +K D N +I
Sbjct: 226 ASIPMLGLG----------------------------AQIHQLVEKSFVPDTAISNALIT 257
Query: 185 GYLDNGCVGVAEDLFQKMH-DRDLTSWKQLINGLVNSRRIDAAISYFKQMPET----CEK 239
Y G + AE +F++MH +DL SW LI + R A+ FK+M
Sbjct: 258 MYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHI 317
Query: 240 TWNSIISVLIRNGLVKEA--------HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
T+ S++S + GLV E H Y + A+ N+I + G++ A++V
Sbjct: 318 TFVSLLSACVNAGLVSEGRMVFDTMVHEYGIVARIEHYAALVNLIGRH---GQLDDALEV 374
Query: 292 FELMT-TRDVTVWNVMI 307
M D +VW +
Sbjct: 375 INSMPMAPDRSVWGAFL 391
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 133/259 (51%), Gaps = 20/259 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++E++ LF +MP DTV+WN++I+G+ + G ++A F++MPER ++NT+I+G ++
Sbjct: 134 MKESEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDRMPERGTISWNTMISGYEKN 193
Query: 66 DNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
N + ++F M E+ D T++S+++ ++ ++ H + K V +
Sbjct: 194 GNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPMLGLGAQI-HQLVEKSFVPDTAIS 252
Query: 122 GALVN----CQRMDLAESYFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
AL+ C ++ AE+ FK+M +D+ SW ++ GR +A +LF +M V
Sbjct: 253 NALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGCYEHHGRATKALQLFKEMRRAKV 312
Query: 177 QAWNL----MIAGYLDNGCVGVAEDLFQKM-HDRDLTS----WKQLINGLVNSRRIDAAI 227
++ +++ ++ G V +F M H+ + + + L+N + ++D A+
Sbjct: 313 MPTHITFVSLLSACVNAGLVSEGRMVFDTMVHEYGIVARIEHYAALVNLIGRHGQLDDAL 372
Query: 228 SYFKQMPETCEKT-WNSII 245
MP +++ W + +
Sbjct: 373 EVINSMPMAPDRSVWGAFL 391
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYN 56
M+ + A+ FD+MP+R T++WN MI GY KNG +++ LF++M E D T++
Sbjct: 160 MQKGEAEHARGFFDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFS 219
Query: 57 TVIAGLMQSDNVQGAKEVFDGME---VRDVVTWNSMISGYVCNGLIDEALRVFHGMPL-K 112
+V+A + ++ +E V D N++I+ Y G +++A +F M K
Sbjct: 220 SVLAACASIPMLGLGAQIHQLVEKSFVPDTAISNALITMYSRCGALNDAEAIFKQMHTKK 279
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTI----MVNGLVREGRIVEARKLF 168
D+VSWN +IG + R A FKEM V I +++ V G + E R +F
Sbjct: 280 DLVSWNALIGCYEHHGRATKALQLFKEMRRAKVMPTHITFVSLLSACVNAGLVSEGRMVF 339
Query: 169 DKM 171
D M
Sbjct: 340 DTM 342
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 189/627 (30%), Positives = 316/627 (50%), Gaps = 37/627 (5%)
Query: 11 NLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF------NQMPERDMFTYNTVIAGLMQ 64
++F P D ++ M++ Y + G + + LF N P+ ++ Y +AG +
Sbjct: 55 SIFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG--K 112
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
S N+ A + G + D N+++ Y NG +D A +F M + + WN +I
Sbjct: 113 SGNLFHAYVLKLG-HIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGC 171
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
A F M AR++ +WT MV G + G + AR+ FD+MP + V +WN M +
Sbjct: 172 WKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQS 231
Query: 185 GYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
Y C A +LF +M + D T+W I+ + A S + + +
Sbjct: 232 AYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQK-HIV 290
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYS------NIASWTNVIVGYFEMGEVGSAIKVFEL 294
NS + + + K + + + + N +W +I Y +G++ A ++F+
Sbjct: 291 LNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDN 350
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES-GPSPDNATFTSVLTICSDLPTLDL 353
M RDV WN MI G +N ++ F +M PD T SVL+ C + L L
Sbjct: 351 MPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKL 410
Query: 354 GRQI----HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
+ + IK+ + F N++I MY++CG++ A F ++ D++S+N++I
Sbjct: 411 SYWVLDIVREKNIKLGISGF----NSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLIS 466
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
G A +G+ ++A++L M +PD +T++GVL+ACS+AGL+++G+ F ++
Sbjct: 467 GFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----A 521
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
P HY C+VDLLGR G +DEA L I++ ++ V+G+LL A RIH + +GE+A
Sbjct: 522 PTVDHYACMVDLLGRAGELDEAKML---IQSMPMKPHAGVYGSLLNASRIHKRVGLGELA 578
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
++ ELEP N G Y++L+ +Y S GR ED KR+ MK+ G+KK G SW++ H
Sbjct: 579 ASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHK 638
Query: 590 FLSGDSSHPKFHRLRYLLNLLHTEIER 616
F GD SH + + LL L +++R
Sbjct: 639 FTVGDRSHEQSKDIYKLLAELERKMKR 665
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 210/443 (47%), Gaps = 78/443 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N ++ A+NLF++M +R WN MI G +K+G A+ LFN MP R++ T+ +++ G
Sbjct: 142 KNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTSMVTG 201
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSW 117
+ +++ A+ FD M R VV+WN+M S Y EAL +FH M D +W
Sbjct: 202 YAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTW 261
Query: 118 --------------------------NLVIGALVNCQRMDL---------AESYFKEMGA 142
++V+ + V +D+ A + F E+G+
Sbjct: 262 VVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGS 321
Query: 143 -RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
R+ +W IM++ R G++ AR+LFD MP +DV +WN MIAGY NG ++ +LF++
Sbjct: 322 QRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKE 381
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M IS P+ E T S++S G +K ++ L
Sbjct: 382 M------------------------ISCMDIQPD--EVTIASVLSACGHIGALKLSYWVL 415
Query: 262 ----EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
EK I+ + ++I Y + G V A ++F+ M TRDV +N +I G N G+
Sbjct: 416 DIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGK 475
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--A 375
E +K + M+E G PD+ T+ VLT CS L+ G+ + Q TV +
Sbjct: 476 EAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSI------QAPTVDHYAC 529
Query: 376 MITMYARCGNIQSALLEFSSVPI 398
M+ + R G + A + S+P+
Sbjct: 530 MVDLLGRAGELDEAKMLIQSMPM 552
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 189/627 (30%), Positives = 316/627 (50%), Gaps = 37/627 (5%)
Query: 11 NLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF------NQMPERDMFTYNTVIAGLMQ 64
++F P D ++ M++ Y + G + + LF N P+ ++ Y +AG +
Sbjct: 55 SIFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG--K 112
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
S N+ A + G + D N+++ Y NG +D A +F M + + WN +I
Sbjct: 113 SGNMFHAYVLKLG-HIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGC 171
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
A F M AR++ +WT MV G + G + AR+ FD+MP + V +WN M +
Sbjct: 172 WKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQS 231
Query: 185 GYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
Y C A +LF +M + D T+W I+ + A S + + +
Sbjct: 232 AYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQK-HIV 290
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYS------NIASWTNVIVGYFEMGEVGSAIKVFEL 294
NS + + + K + + + + N +W +I Y +G++ A ++F+
Sbjct: 291 LNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDN 350
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES-GPSPDNATFTSVLTICSDLPTLDL 353
M RDV WN MI G +N ++ F +M PD T SVL+ C + L L
Sbjct: 351 MPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKL 410
Query: 354 GRQI----HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
+ + IK+ + F N++I MY++CG++ A F ++ D++S+N++I
Sbjct: 411 SYWVLDIVREKNIKLGISGF----NSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLIS 466
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
G A +G+ ++A++L M +PD +T++GVL+ACS+AGL+++G+ F ++
Sbjct: 467 GFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----A 521
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
P HY C+VDLLGR G +DEA L I++ ++ V+G+LL A RIH + +GE+A
Sbjct: 522 PTVDHYACMVDLLGRAGELDEAKML---IQSMPMKPHAGVYGSLLNASRIHKRVGLGELA 578
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
++ ELEP N G Y++L+ +Y S GR ED KR+ MK+ G+KK G SW++ H
Sbjct: 579 ASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHK 638
Query: 590 FLSGDSSHPKFHRLRYLLNLLHTEIER 616
F GD SH + + LL L +++R
Sbjct: 639 FTVGDRSHEQSKDIYKLLAELERKMKR 665
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 210/443 (47%), Gaps = 78/443 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N ++ A+NLF++M +R WN MI G +K+G A+ LFN MP R++ T+ +++ G
Sbjct: 142 KNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTSMVTG 201
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSW 117
+ +++ A+ FD M R VV+WN+M S Y EAL +FH M D +W
Sbjct: 202 YAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTW 261
Query: 118 --------------------------NLVIGALVNCQRMDL---------AESYFKEMGA 142
++V+ + V +D+ A + F E+G+
Sbjct: 262 VVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGS 321
Query: 143 -RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
R+ +W IM++ R G++ AR+LFD MP +DV +WN MIAGY NG ++ +LF++
Sbjct: 322 QRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKE 381
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M IS P+ E T S++S G +K ++ L
Sbjct: 382 M------------------------ISCMDIQPD--EVTIASVLSACGHIGALKLSYWVL 415
Query: 262 ----EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
EK I+ + ++I Y + G V A ++F+ M TRDV +N +I G N G+
Sbjct: 416 DIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGK 475
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--A 375
E +K + M+E G PD+ T+ VLT CS L+ G+ + Q TV +
Sbjct: 476 EAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSI------QAPTVDHYAC 529
Query: 376 MITMYARCGNIQSALLEFSSVPI 398
M+ + R G + A + S+P+
Sbjct: 530 MVDLLGRAGELDEAKMLIQSMPM 552
>gi|302760807|ref|XP_002963826.1| hypothetical protein SELMODRAFT_79356 [Selaginella moellendorffii]
gi|300169094|gb|EFJ35697.1| hypothetical protein SELMODRAFT_79356 [Selaginella moellendorffii]
Length = 535
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/507 (31%), Positives = 258/507 (50%), Gaps = 8/507 (1%)
Query: 67 NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN 126
NVQ A++ FD M ++D V+W M+S Y G I++A +F +P K + N ++ A
Sbjct: 15 NVQEARKFFDSMPLQDSVSWTIMVSAYAQGGHIEQAKNLFESLPWKSLACENAMLQAYSL 74
Query: 127 CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
++ A+ F M RDV SWT M+ + G +A+ LFD+ K++ +W M+ Y
Sbjct: 75 NGDLENAKLVFDRMTKRDVVSWTTMIGAYAQNGYAFDAKSLFDRFERKNIISWTAMVHAY 134
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIIS 246
N +A ++F++M D+ SW L++ ++ +++A F++MP WNSII+
Sbjct: 135 SQNKSFDLAREMFERMPQHDVFSWNILLSAYAHNGHLESAKIAFERMPSRDVVAWNSIIA 194
Query: 247 VLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVM 306
+ G ++EA P N A+W +I + + A +F+ M +RDV W +
Sbjct: 195 FFSQKGKLEEAKELFHLMPEPNTAAWNVMIQANAQAWHLDVAKGLFDQMPSRDVISWTTL 254
Query: 307 IFGLGE----NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
+ + + E + F M G SPD+ T+ ++ CS + + G A +
Sbjct: 255 MNSYADMSNLDGCQESAMDVFRLMDLHGVSPDSVTYIAIFDACSRIANAEEGSAFIASIV 314
Query: 363 KIARNQFT-TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
Q + V NA +TMY R G A F +P+ D +SWN+++ A +G+ E AL
Sbjct: 315 HPGILQDSVVVGNAALTMYGRSGLAAGAWSVFQQMPVRDSVSWNAMLTAFARNGHGEAAL 374
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
++F M L PD ITFV VLSACS+AGL+ + R YF + Y L P HY C+ DL
Sbjct: 375 DVFLAMELEGLVPDIITFVNVLSACSHAGLLHRARGYFHSISRDYGLTPIYDHYVCLTDL 434
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
L R G + EA L+N + E + W ALLGACR H +++ G A ++ + +
Sbjct: 435 LARSGRLVEAEELVNSM---PFEPNYEAWMALLGACRSHGDVRRGNRAAGFFVQADVDAE 491
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMK 568
Y++L+ +Y G ++D I M+
Sbjct: 492 SPYILLSHLYAEAGSKDDVLVIRKAMR 518
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 145/532 (27%), Positives = 246/532 (46%), Gaps = 61/532 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ I++A+NLF+ +P + N M++ Y NG L+NA +F++M +RD+ ++ T+I
Sbjct: 43 QGGHIEQAKNLFESLPWKSLACENAMLQAYSLNGDLENAKLVFDRMTKRDVVSWTTMIGA 102
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
Q+ AK +FD E +++++W +M+ Y N D A +F MP DV SWN+++
Sbjct: 103 YAQNGYAFDAKSLFDRFERKNIISWTAMVHAYSQNKSFDLAREMFERMPQHDVFSWNILL 162
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
A + ++ A+ F+ M +RDV +W ++ ++G++ EA++LF MP + AWN+
Sbjct: 163 SAYAHNGHLESAKIAFERMPSRDVVAWNSIIAFFSQKGKLEEAKELFHLMPEPNTAAWNV 222
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID----AAISYFKQM---- 233
MI + VA+ LF +M RD+ SW L+N + +D +A+ F+ M
Sbjct: 223 MIQANAQAWHLDVAKGLFDQMPSRDVISWTTLMNSYADMSNLDGCQESAMDVFRLMDLHG 282
Query: 234 --PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEMGEV 285
P++ T+ +I R +E +++ + I +V+VG Y G
Sbjct: 283 VSPDSV--TYIAIFDACSRIANAEEGSAFIASIVHPGILQ-DSVVVGNAALTMYGRSGLA 339
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A VF+ M RD WN M+ N GE L F+ M+ G PD TF +VL+ C
Sbjct: 340 AGAWSVFQQMPVRDSVSWNAMLTAFARNGHGEAALDVFLAMELEGLVPDIITFVNVLSAC 399
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
S HA + AR F ++S ++ PI+D +
Sbjct: 400 S-----------HAGLLHRARGYFHSISR-----------------DYGLTPIYD--HYV 429
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNK 465
+ LA G +A EL M F+P+ ++ +L AC G V +G
Sbjct: 430 CLTDLLARSGRLVEAEELVNSM---PFEPNYEAWMALLGACRSHGDVRRGN-----RAAG 481
Query: 466 YFLQP---RSAHYTCVVDLLGRFGLIDEAMNLLNEI-RADGIEVSPTVWGAL 513
+F+Q + Y + L G D+ + + + R ++ SP + G L
Sbjct: 482 FFVQADVDAESPYILLSHLYAEAGSKDDVLVIRKAMRRKTKLDQSPVILGGL 533
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 178/612 (29%), Positives = 302/612 (49%), Gaps = 54/612 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I A+ +F ++ + +WN MI GY K + A+ F QMPERD ++NT+I+
Sbjct: 44 IYAAEQVFLRIEKPSLFSWNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHH 103
Query: 66 DNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEA------LRVFHGMPLKDVV 115
+ F M ++ + +T+ S++S C + D R+ P DV+
Sbjct: 104 GLHIQSLGTFVEMWIQGCQPNSMTYASVLSA--CANIYDFQWGKHLHARIVRVEPFLDVL 161
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
N ++ C +D ++ F + +V +WT +++G+ G E +F +M
Sbjct: 162 VGNGLVDMYAKCGLIDASKRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDC 221
Query: 176 VQAWNLMIAGYL----DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN----SRRIDAAI 227
V N ++A L + + E L + S + N ++ + A
Sbjct: 222 VIMDNFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKAS 281
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGS 287
F+ M +W ++I+ +G V+ A Y + P N+ SW
Sbjct: 282 LAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISW--------------- 326
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
N M+ +N EEGLK ++ M PD TF +++ CS+
Sbjct: 327 ----------------NAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSE 370
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
L LG QI +QA+K+ +V N+ IT+Y+RCG I+ A F S+ ++ISWNSI
Sbjct: 371 LAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSI 430
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
+ G A +G K +E+F+ M + KPD IT++ +LS CS++GLV + +Y+F+ M +
Sbjct: 431 MGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTKDFG 490
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
+ H+ C+VDL GR GL+ A+++++++ + + ++WGALL ACRIH++ ++ E
Sbjct: 491 ISVTLEHFVCMVDLFGRAGLLKLALDMIDQMP---FKPNASIWGALLSACRIHHDTEMAE 547
Query: 528 IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGG 587
+A + ++EL N Y++L Y S GR E + MKE V+K+PGCSWI++ +
Sbjct: 548 LAMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKRVQKDPGCSWIEVCNRV 607
Query: 588 HVFLSGDSSHPK 599
HVF + D+SHP+
Sbjct: 608 HVFTANDTSHPQ 619
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 111/295 (37%), Gaps = 72/295 (24%)
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS---------------- 388
CS + + + Q+H + K + N++I MY +C I +
Sbjct: 3 CSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFSW 62
Query: 389 ---------------ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
A+ F +P D +SWN+II ++HG ++L F M + +
Sbjct: 63 NCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQ 122
Query: 434 PDDITFVGVLSACS---------------------------------YA--GLVDQGRYY 458
P+ +T+ VLSAC+ YA GL+D +
Sbjct: 123 PNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRV 182
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F+ ++ + +T ++ + FG +E ++ ++R D + + + +LG C
Sbjct: 183 FNTLR-----EHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCE 237
Query: 519 IHNNIKVGE-IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
NI +GE + G V ++ V MY CG E A F M + V
Sbjct: 238 GETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDV 292
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF----NQMPERDMFTYNT 57
+ ++ A++ F++MP+R+ ++WN M+ Y +N F + + L+ Q D T+ T
Sbjct: 304 HSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVT 363
Query: 58 VIAGLMQ-SDNVQGAKEVFDGMEV---RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+I + + + G + + ++V DV NS I+ Y G I+EA +F + K+
Sbjct: 364 MIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKN 423
Query: 114 VVSWNLVIGALV-NCQRMDLAESYFKEMGA---RDVASWTIMVNGLVREGRIVEARKLFD 169
++SWN ++G N + M + E + + A D ++ +++G G + EA+ F+
Sbjct: 424 LISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFN 483
Query: 170 KM 171
M
Sbjct: 484 SM 485
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 17/191 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
R RI+EAQNLFD + +++ ++WN ++ GY +NG + +F M + D TY
Sbjct: 405 RCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIA 464
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
+++G S V+ AK F+ M +D + + +VC GL+ AL + MP
Sbjct: 465 ILSGCSHSGLVKEAKYHFNSM-TKDFGI-SVTLEHFVCMVDLFGRAGLLKLALDMIDQMP 522
Query: 111 LKDVVS-WNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVNGLVREGRIVEARK 166
K S W ++ A ++AE K E+ + S+ ++ N GR+ +
Sbjct: 523 FKPNASIWGALLSACRIHHDTEMAELAMKNLLELNTENFESYILLANTYSSFGRLECVSE 582
Query: 167 LFDKMPAKDVQ 177
+ M K VQ
Sbjct: 583 VRQVMKEKRVQ 593
>gi|345505234|gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus sativus]
Length = 577
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 175/528 (33%), Positives = 279/528 (52%), Gaps = 21/528 (3%)
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAE 134
E++D WN++I + +AL +F M L D S +LV+ A C R+ A+
Sbjct: 54 EIKDPFLWNAVIKSHSHGADPRKALLLFCLMLENGVLVDKFSMSLVLKA---CSRLGFAK 110
Query: 135 SYFKEMGA-------RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
+ G D+ ++ ++ G + AR++FD+MP +D ++N MI GY+
Sbjct: 111 EGMQVHGFLIKSRTWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYV 170
Query: 188 DNGCVGVAEDLFQKM--HDRDLTSWKQLINGLVN-SRRIDAAISYFKQMPETCEKTWNSI 244
G V A +LF M R+L +W +I G + ++ A F +MPE +WNS+
Sbjct: 171 KCGLVESAGELFDLMPREKRNLITWNSMIGGYAQRADGVNVASKLFDEMPEKDLISWNSM 230
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
I +++G +++A + P ++ +W +I GY ++G V A +F+ M RDV +N
Sbjct: 231 IGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVHQAKTLFDQMPHRDVVAYN 290
Query: 305 VMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
M+ G +N E L+ F M KES SPD T VL+ + L L +H ++
Sbjct: 291 SMMSGFVQNRYHIEALEVFNHMEKESHLSPDETTLVIVLSAIAQLGRLTKAIDMHLYIVE 350
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
+ A+I MY++CG+IQ A+ F + I WN++I GLA HG E A ++
Sbjct: 351 KRFLLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDM 410
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
++ KPD ITFVGVL+ACS++GLV +G F+ M+ K+ ++PR HY C+VD+L
Sbjct: 411 LLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILA 470
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGV 543
R G I+ A NL+ E+ IE + +W L AC H + GE+ + ++ N
Sbjct: 471 RSGSIELAKNLIEEM---PIEPNDVIWRTFLNACSHHKEFETGELVAKHLILQAGYNPSS 527
Query: 544 YLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
Y++L+ MY S G +D +R+ MKE ++K PGCSWI+++ H FL
Sbjct: 528 YVLLSNMYASNGMWKDVRRVRTMMKEKKIEKLPGCSWIELDGRVHEFL 575
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 210/422 (49%), Gaps = 36/422 (8%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAM----CLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF 75
D + +++++ + GF M L D+F N +I ++ + A++VF
Sbjct: 92 DKFSMSLVLKACSRLGFAKEGMQVHGFLIKSRTWSDLFLQNCLIGLYLKCGCLGFARQVF 151
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL--KDVVSWNLVIGALVNCQRMD-- 131
D M RD V++NSMI GYV GL++ A +F MP +++++WN +IG QR D
Sbjct: 152 DRMPQRDSVSYNSMIDGYVKCGLVESAGELFDLMPREKRNLITWNSMIGGYA--QRADGV 209
Query: 132 -LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
+A F EM +D+ SW M+ G V+ GRI +A+ LFD MP +DV W +MI GY G
Sbjct: 210 NVASKLFDEMPEKDLISWNSMIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLG 269
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSII 245
V A+ LF +M RD+ ++ +++G V +R A+ F M + E T ++
Sbjct: 270 LVHQAKTLFDQMPHRDVVAYNSMMSGFVQNRYHIEALEVFNHMEKESHLSPDETTLVIVL 329
Query: 246 SVLIRNGLVKEA---HSYL-EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
S + + G + +A H Y+ EK + +I Y + G + A++VFE + ++ +
Sbjct: 330 SAIAQLGRLTKAIDMHLYIVEKRFLLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSID 389
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLG 354
WN MI GL + LGE +Q++ PD+ TF VL CS L +L
Sbjct: 390 HWNAMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELM 449
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLA 412
R+ H ++ M+ + AR G+I+ A L+E + +D+I W + + +
Sbjct: 450 RRKHKIEPRLQH------YGCMVDILARSGSIELAKNLIEEMPIEPNDVI-WRTFLNACS 502
Query: 413 YH 414
+H
Sbjct: 503 HH 504
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 195/397 (49%), Gaps = 25/397 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDMFTYNTVIAGLMQ-S 65
A+ +FD+MPQRD+V++N MI GY K G +++A LF+ MP +R++ T+N++I G Q +
Sbjct: 147 ARQVFDRMPQRDSVSYNSMIDGYVKCGLVESAGELFDLMPREKRNLITWNSMIGGYAQRA 206
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D V A ++FD M +D+++WNSMI GYV +G I++A +F MP +DVV+W ++I
Sbjct: 207 DGVNVASKLFDEMPEKDLISWNSMIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYG 266
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP-----AKDVQAWN 180
+ A++ F +M RDV ++ M++G V+ +EA ++F+ M + D
Sbjct: 267 KLGLVHQAKTLFDQMPHRDVVAYNSMMSGFVQNRYHIEALEVFNHMEKESHLSPDETTLV 326
Query: 181 LMIAGYLDNGCVGVAEDL-FQKMHDRDLTSWK---QLINGLVNSRRIDAAISYFKQMPET 236
++++ G + A D+ + R L S K LI+ I A+ F+ +
Sbjct: 327 IVLSAIAQLGRLTKAIDMHLYIVEKRFLLSGKLGVALIDMYSKCGSIQHAMRVFEGIESK 386
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYFEMGEVGSAIKVF 292
WN++I L +GL + A L + +I ++ V+ G V + F
Sbjct: 387 SIDHWNAMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCF 446
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEG-LKFFVQMKESGP-SPDNATFTSVLTICSDLPT 350
ELM + + +G + L G ++ + E P P++ + + L CS
Sbjct: 447 ELMRRKHKIEPRLQHYGCMVDILARSGSIELAKNLIEEMPIEPNDVIWRTFLNACSHHKE 506
Query: 351 LDLGRQIHAQAIKIA---RNQFTTVSNAMITMYARCG 384
+ G + I A + + +SN MYA G
Sbjct: 507 FETGELVAKHLILQAGYNPSSYVLLSN----MYASNG 539
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 193/648 (29%), Positives = 324/648 (50%), Gaps = 38/648 (5%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGL 62
+A+N+FD +++ V WN M+ G+ +N + A+ +F M + D FT+ +++
Sbjct: 387 SDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGAC 446
Query: 63 MQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ K+V + M++ V N+ + Y G I +A +F +P KD +SW
Sbjct: 447 TYLSSFYLGKQVHCVTIKNCMDISLFVA-NATLDMYSKYGAIGDAKALFSLIPYKDSISW 505
Query: 118 NLVIGALVNCQRMDLAESYFKEMG----ARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
N + L + A K M D S++ +N R E K +
Sbjct: 506 NALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINA-CSNIRATETGKQIHCLAI 564
Query: 174 K-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
K + + +I Y +G V + +F ++ + LI G V + D AI
Sbjct: 565 KYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQ 624
Query: 229 YFKQMPETCEK----TWNSIISVL---IRNGLVKEAHSYLEKYP--YSNIASWTNVIVGY 279
F+Q+ + K T++SI+S + + + K+ H Y K Y + ++ Y
Sbjct: 625 LFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIY 684
Query: 280 FEMGEVGSAIKVF-ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ + A K+ E+ +++ W +I G +N G+ L F +M+ D ATF
Sbjct: 685 LKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATF 744
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP- 397
SVL CSD+ G++IH K + T ++A+I MY++CG++ S+ F +
Sbjct: 745 ASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKN 804
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
DI+ WNS+I G A +GYA++AL LF++M KPD++TF+GVL AC+++GL+ +GR+
Sbjct: 805 KQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRH 864
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI--RADGIEVSPTVWGALLG 515
+F M+ Y L PR HY C +DLLGR G + EA ++++ R DG+ VW L
Sbjct: 865 FFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGV-----VWATYLA 919
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
ACR+H + + G+IA +++ELEP S Y++L+ ++ + G +AK M+E GV K
Sbjct: 920 ACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKF 979
Query: 576 PGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILFDAY 623
PGCSWI + + +FL D HP R+ +L L ++++ D Y
Sbjct: 980 PGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKKDNDIDEY 1027
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 156/607 (25%), Positives = 259/607 (42%), Gaps = 102/607 (16%)
Query: 33 KNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISG 92
K+GF + C + DM+ + +V A+ VFDG+ D + W+SMI+
Sbjct: 196 KSGFSSSVFC---EAALVDMYA---------KCGDVPNARRVFDGIACPDTICWSSMIAC 243
Query: 93 YVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV 152
Y G EAL +F RMD K A D + ++
Sbjct: 244 YHRVGCYQEALALF---------------------SRMD------KMGSAPDQVTLVTII 276
Query: 153 NGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
+ L GR+ A L KMP AWN +I+G+ +G L+ +D+ SW
Sbjct: 277 STLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY-----KDMRSW-- 329
Query: 213 LINGLVNSRRIDAA-ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
GL +R A+ +S M E +V+ +GL +N+
Sbjct: 330 ---GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVM--HGLD------------ANVFV 372
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
+++I Y + G A VF+L +++ +WN M+ G +N+L EE ++ F M
Sbjct: 373 GSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTL 432
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
D TF S+L C+ L + LG+Q+H IK + V+NA + MY++ G I A
Sbjct: 433 QTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKA 492
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
FS +P D ISWN++ GLA + E+A+ + +RMRL PDD++F ++ACS
Sbjct: 493 LFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRA 552
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI----------------------- 488
+ G+ C+ KY + A + ++DL + G +
Sbjct: 553 TETGK-QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIA 611
Query: 489 --------DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEP 538
DEA+ L ++ DG++ S + ++L C N +G+ ++ +
Sbjct: 612 GFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLY 671
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+++ + + L +YL EDA ++ +M ++ E W I G GD S
Sbjct: 672 DDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFE----WTAIISGYAQNGYGDHSLV 727
Query: 599 KFHRLRY 605
F R+R+
Sbjct: 728 SFWRMRH 734
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 212/454 (46%), Gaps = 35/454 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAG 61
+ A+ +FD + DT+ W+ MI Y + G A+ LF++M + D T T+I+
Sbjct: 219 VPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIIST 278
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
L S + A + M V WN++ISG+ +GL L ++ KD+ SW L
Sbjct: 279 LASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY-----KDMRSWGLWP 333
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
S F M S + V EG+ + A + + A +V +
Sbjct: 334 -----------TRSTFASM-----LSAAANMKAFV-EGQQMHAAAVMHGLDA-NVFVGSS 375
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETC 237
+I Y GC A+++F ++++ W ++ G V + + AI F+ M +T
Sbjct: 376 LINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTD 435
Query: 238 EKTWNSII---SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFE 293
E T+ SI+ + L L K+ H K N + Y + G +G A +F
Sbjct: 436 EFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFS 495
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
L+ +D WN + GL +N EE + +M+ G +PD+ +F++ + CS++ +
Sbjct: 496 LIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATET 555
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
G+QIH AIK V +++I +Y++ G+++S+ F+ V I+ N++I G
Sbjct: 556 GKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQ 615
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
+ ++A++LF+++ KP +TF +LS CS
Sbjct: 616 NNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 649
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 130/551 (23%), Positives = 230/551 (41%), Gaps = 83/551 (15%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYN 56
+ R+ A L KMP TV WN +I G+ ++G N + L+ M P R F
Sbjct: 282 SGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASM 341
Query: 57 TVIAGLMQS-----------------DNV----------------QGAKEVFDGMEVRDV 83
A M++ NV AK VFD +++
Sbjct: 342 LSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNI 401
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYFKE 139
V WN+M++G+V N L +EA+R+F M D ++ ++GA L +
Sbjct: 402 VMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQ-VHC 460
Query: 140 MGARDVASWTIMVNGLV-----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ ++ ++ V + G I +A+ LF +P KD +WN + G N
Sbjct: 461 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 520
Query: 195 AEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
A + ++M +T S+ IN N R + T I + I+
Sbjct: 521 AVCMLKRMRLHGITPDDVSFSTAINACSNIRATE---------------TGKQIHCLAIK 565
Query: 251 NGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
G+ SN A +++I Y + G+V S+ K+F + + N +I G
Sbjct: 566 YGIC------------SNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGF 613
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA-RNQF 369
+N+ +E ++ F Q+ + G P + TF+S+L+ CS +G+Q+H +K
Sbjct: 614 VQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDD 673
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMR 428
T + ++ +Y + ++ A + +P H ++ W +II G A +GY + +L F RMR
Sbjct: 674 TLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMR 733
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
+ + D+ TF VL ACS G+ + F +A + ++D+ + G +
Sbjct: 734 HCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETA-TSALIDMYSKCGDV 792
Query: 489 DEAMNLLNEIR 499
+ E++
Sbjct: 793 ISSFEAFKELK 803
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 6/237 (2%)
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
+G PD VL+ CS + L GRQ+H +K + A++ MYA+CG++ +
Sbjct: 162 AGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPN 221
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F + D I W+S+I G ++AL LF RM PD +T V ++S +
Sbjct: 222 ARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS 281
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
+G +D M P + + V+ + GL + L ++R+ G+ + +
Sbjct: 282 SGRLDHATALLKKMPT-----PSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRS 336
Query: 509 VWGALL-GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ ++L A + ++ ++ VM N V L +Y CG DAK +F
Sbjct: 337 TFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF 393
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/624 (29%), Positives = 310/624 (49%), Gaps = 41/624 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNG----FLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
A++LFD++P +N +IR Y G ++P+ + +T+ V+
Sbjct: 82 ARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSA 141
Query: 65 SDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN- 118
+++ A+ V G+ D+ +++ Y A VF MP +DVV+WN
Sbjct: 142 LLDLRSARAVHCHAARAGLHA-DLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNA 200
Query: 119 LVIGALVNCQRMDLAESYF--KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
++ G ++ + D ++ A + ++ ++ L + G + + R + A V
Sbjct: 201 MLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGRAVH----AYSV 256
Query: 177 QAWNL------------MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
+A +L ++ Y G + A +F+ M R+ +W L+ G V R+
Sbjct: 257 RACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRML 316
Query: 225 AAISYFKQMPET--CEKTWNSIISVLIRNG------LVKEAHSYLEKYP-YSNIASWTNV 275
A S FK M C + S+ S L L K+ H+ L K ++++ + ++
Sbjct: 317 EAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSL 376
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ Y + G + A +F+ M +D ++ ++ G +N +E + F +M+ PD
Sbjct: 377 LSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDV 436
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
AT S++ CS L L G+ H I T++ NA+I MYA+CG I + F
Sbjct: 437 ATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDV 496
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+P DI+SWN++I G HG ++A LF M+ +PDD+TF+ ++SACS++GLV +G
Sbjct: 497 MPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEG 556
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
+ +F M +KY + PR HY +VDLL R G +DEA I+ ++ VWGALLG
Sbjct: 557 KRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQF---IQGMPLKADVRVWGALLG 613
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
ACR+H NI +G+ + +L P +G +++L+ ++ + GR ++A + KE G KK
Sbjct: 614 ACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKS 673
Query: 576 PGCSWIQINDGGHVFLSGDSSHPK 599
PGCSWI+IN H F+ GD SH +
Sbjct: 674 PGCSWIEINGSLHAFIGGDRSHAQ 697
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 193/445 (43%), Gaps = 34/445 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNG-FLDNAMCLFNQMPERDMFTYNTVIA 60
+ A + A +F +MP RD V WN M+ GY +G + D CL M + +T++A
Sbjct: 176 KCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLL-LMQDDHAPNASTLVA 234
Query: 61 --GLMQSDNVQGAKEVFDGMEVR---------DVVTWNSMISGYVCNGLIDEALRVFHGM 109
L+ VR V+ +++ Y G + A RVF M
Sbjct: 235 LLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAM 294
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA--SWTIMVNGLVREGRIVE--AR 165
+++ V+W+ ++G V C RM A S FK+M A+ + S T + + L + +
Sbjct: 295 AVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLG 354
Query: 166 KLFDKMPAK-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
K + AK D+ A N +++ Y G + A LF +M +D S+ L++G V +
Sbjct: 355 KQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQN 414
Query: 221 RRIDAAISYFKQMPETCE-----KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNV 275
+ D A F++M + C T S+I ++ IAS T++
Sbjct: 415 GKADEAFRVFRKM-QACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSI 473
Query: 276 ----IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
I Y + G + + ++F++M RD+ WN MI G G + LG+E F+ MK
Sbjct: 474 CNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQAC 533
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQ-IHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
PD+ TF +++ CS + G++ H A K M+ + AR G + A
Sbjct: 534 EPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAY 593
Query: 391 LEFSSVPIH-DIISWNSIICGLAYH 414
+P+ D+ W +++ H
Sbjct: 594 QFIQGMPLKADVRVWGALLGACRVH 618
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF----NQMPERDMFTYNT 57
+ RI ++ +FD MP RD V+WN MI GY +G A LF +Q E D T+
Sbjct: 483 KCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFIC 542
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVT-----WNSMISGYVCNGLIDEALRVFHGMPLK 112
+I+ S V K F M + +T + M+ G +DEA + GMPLK
Sbjct: 543 LISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLK 602
Query: 113 -DVVSWNLVIGALVNCQRMDLAE---SYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
DV W ++GA + +DL + S +++G ++ ++ N GR EA ++
Sbjct: 603 ADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEV 661
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 178/575 (30%), Positives = 305/575 (53%), Gaps = 40/575 (6%)
Query: 54 TYNTVIAGL--MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-- 109
+ N +IA + M S V A VF DV+TWNSM+ +V + + AL+ + M
Sbjct: 12 SLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLE 71
Query: 110 PLKDVVSWNLVIGALVNCQRM-------DLAESYFKEMGARDVASWTIMVNGLVREGRIV 162
++V L C + L K M D+ T ++N G +
Sbjct: 72 RSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLK 131
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
AR LF++M ++ W MI+GY+ N C A L++KM + + + + LV
Sbjct: 132 SARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLV---- 187
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFE 281
+A + K + G+ + HS++ + A + +V Y +
Sbjct: 188 --SACAELKDL------------------GVGMKLHSHIREMDMKICAVLGSALVNMYAK 227
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE-SGPSPDNATFTS 340
G++ +A +VF+ ++ +DV W+ +IFG +N+ E L+ F ++ S P+ T +
Sbjct: 228 CGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILA 287
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
V++ C+ L L+ GR +H + + +++N++I M+++CG+I +A F S+ D
Sbjct: 288 VISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKD 347
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+ISWNS++ G A HG +AL F M+ TD +PD+ITF+GVL+ACS+AGLV +G+ F
Sbjct: 348 LISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFY 407
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
++ Y ++ +S HY C+VDLL R GL+ EA IR ++ +WG++LGACR++
Sbjct: 408 EIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREF---IRVMPLQPDGAIWGSMLGACRVY 464
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
NN+++GE A +++LEP N GVY++L+ +Y + K++ M E G++K PGCS
Sbjct: 465 NNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSS 524
Query: 581 IQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+ I++ H FL+GD SHP+ + +L + +++
Sbjct: 525 VVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLK 559
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 174/398 (43%), Gaps = 72/398 (18%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVIAG-- 61
A ++F + D +TWN M+R + + A+ + +M ER D FT+ +++ G
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 62 ------------------LMQSD---------------NVQGAKEVFDGMEVRDVVTWNS 88
++ SD +++ A+ +F+ M R+ V W S
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 89 MISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLA---ESYFKEMG 141
MISGY+ N +EAL ++ M D V+ ++ A + + + S+ +EM
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 142 ARDVASW-TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
+ A + +VN + G + AR++FDK+ KDV AW+ +I GY+ N A LF+
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
++ N N I A IS Q+ + W H Y
Sbjct: 271 EVAGGS--------NMRPNEVTILAVISACAQLGDLETGRW---------------VHDY 307
Query: 261 LEKYPYSNIASWTNVIVGYF-EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+ + + S N ++ F + G++ +A ++F+ M+ +D+ WN M+ G + LG E
Sbjct: 308 ITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREA 367
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
L F M+ + PD TF VLT CS + G+++
Sbjct: 368 LAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKL 405
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 132/317 (41%), Gaps = 57/317 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
++ A+ LF++M R+ V W MI GY KN + A+ L+ +M E D T T+++
Sbjct: 130 LKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSA 189
Query: 62 LMQ-----------------------------------SDNVQGAKEVFDGMEVRDVVTW 86
+ +++ A++VFD + +DV W
Sbjct: 190 CAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAW 249
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWN--LVIGALVNCQRMDLAES-------YF 137
+++I GYV N EAL++F + + N ++ + C ++ E+
Sbjct: 250 SALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYIT 309
Query: 138 KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+ V+ +++ + G I A+++FD M KD+ +WN M+ G+ +G A
Sbjct: 310 RTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALA 369
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE---------KTWNSIISVL 248
F+ M DL + G++ + + K++ E + + ++ +L
Sbjct: 370 QFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLL 429
Query: 249 IRNGLVKEAHSYLEKYP 265
R GL+ EA ++ P
Sbjct: 430 CRAGLLAEAREFIRVMP 446
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/667 (27%), Positives = 333/667 (49%), Gaps = 85/667 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PER-------- 50
+++A +F+KMP+ D V+WN MI G+ K+ ++ F M P R
Sbjct: 160 VEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSIL 219
Query: 51 -------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD--- 82
+ + +++I M+ +++ A+ +F+ + +D
Sbjct: 220 SCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVR 279
Query: 83 --VVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNC-QRMDLAES--- 135
V WN MISGYV NG +AL +F M + + ++ ++ C + +D+A
Sbjct: 280 RNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQI 339
Query: 136 ---YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
FK ++ T +++ ++ G + K+F + ++ W+ +I+ +GC
Sbjct: 340 HGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCP 399
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA---AISYFKQMPETCEKTWNSIISVLI 249
A +LF + D GL +S + A A S PE + I +
Sbjct: 400 TKALELFYEFKMED---------GLADSGILVAVLRACSSLTLKPEGMQ-----IHGLAT 445
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
+ G V S++ + ++ Y + ++G + KVF ++ +D+ WN +I G
Sbjct: 446 KMGFV------------SDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISG 493
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
+++ +E LK F M+ P+ T +L++C+ L + L +++H I+
Sbjct: 494 YAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGST 553
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
VSN++I YA+CG+I S+L F +P + +SWNSII G+ H ++ + LF++M
Sbjct: 554 VLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVA 613
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+ KPD +TF +LSACS+AG VD+G YF M + L+P+ YTC+VDLLGR G ++
Sbjct: 614 SGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLN 673
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
+A +L I A +WG+LLG+C+ H + + EI + +L P++ G ++L
Sbjct: 674 QAYDL---IMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLAN 730
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNL 609
+Y + G+ + ++ +++K+ G+KK+PGCSWI++++ H+F++GD SH + + +
Sbjct: 731 LYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHIFIAGDRSHSQSDEIYAAVES 790
Query: 610 LHTEIER 616
L TEI+R
Sbjct: 791 LTTEIKR 797
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 201/474 (42%), Gaps = 87/474 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDT-----VTWNVMIRGYFKNGFLDNAMCLFNQM-------- 47
M+ I+ A+N+F+ + +D+ V WNVMI GY NG A+ LF +M
Sbjct: 257 MKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPD 316
Query: 48 -----------PERDMFTYNTVIAGLM----QSDNVQGAKEVFD----------GMEV-- 80
E + I GL+ +N++ + D G+++
Sbjct: 317 YSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFR 376
Query: 81 ----RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD-VVSWNLVIGALVNCQRMDLAES 135
+++ W+++IS +G +AL +F+ ++D + +++ L C + L
Sbjct: 377 RSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPE 436
Query: 136 YFK------EMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD 188
+ +MG DV + +V+ + + ++K+F ++ KD+ +WN +I+GY
Sbjct: 437 GMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQ 496
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL 248
+ C A F+ M ++ N+ I +S + SV+
Sbjct: 497 DECADEALKAFRDMQLEEIRP---------NTVTIACILSVCAHL------------SVM 535
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTN-VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
L KE H YL + + +N +I Y + G++ S++ FE M R+ WN +I
Sbjct: 536 T---LCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSII 592
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI----- 362
G+G + +E + F +M SG PD+ TFT++L+ CS +D G + +
Sbjct: 593 LGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNL 652
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP-IHDIISWNSIICGLAYHG 415
K Q+T M+ + R G++ A ++P D W S++ HG
Sbjct: 653 KPQLEQYT----CMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHG 702
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 255 KEAHSYLEKYPYSNIASWTN-VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
++ H ++ K + S N ++ Y++ G V A+++FE M D+ WN MI G ++
Sbjct: 129 RQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKS 188
Query: 314 DLGEEGLKFFVQMK-ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
L FF M E G P+ S + CS L +L GR+IH +K + +
Sbjct: 189 MDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYL 248
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIIS-----WNSIICGLAYHGYAEKALELFERM 427
+++I MY +CG+I++A F+S+ D + WN +I G +G +AL LF +M
Sbjct: 249 VSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKM 308
Query: 428 RLTDFKPDDITFVGVLSACS 447
+ KPD T V + S CS
Sbjct: 309 MVWGIKPDYSTMVSLFSLCS 328
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 128/286 (44%), Gaps = 20/286 (6%)
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFEL 294
+T KT + I +++I V + + +K+ Y+ I W++ + + I+ F
Sbjct: 22 QTPSKTPHHISNLVIVTSPVSCSLRF-QKFNYNPIQKWSS--------KPLSTKIQTF-- 70
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN-ATFTSVLTICSDLPTLDL 353
V+ N +I E+ ++ + +++M + G + F ++ L +
Sbjct: 71 ---VSVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYK 127
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
GRQIH +K+ +V N+++TMY +CG ++ A+ F +P D++SWN++I G
Sbjct: 128 GRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQK 187
Query: 414 HGYAEKALELFERMRLTDFK--PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
++L F M + +F P+ + V + +CS + GR + K L
Sbjct: 188 SMDYTRSLMFFRSM-VWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVV-KSGLDVE 245
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEI-RADGIEVSPTVWGALLGA 516
+ ++++ + G I A N+ N I D + + +W ++
Sbjct: 246 EYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISG 291
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 193/648 (29%), Positives = 324/648 (50%), Gaps = 38/648 (5%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGL 62
+A+N+FD +++ V WN M+ G+ +N + A+ +F M + D FT+ +++
Sbjct: 377 SDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGAC 436
Query: 63 MQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ K+V + M++ V N+ + Y G I +A +F +P KD +SW
Sbjct: 437 TYLSSFYLGKQVHCVTIKNCMDISLFVA-NATLDMYSKYGAIGDAKALFSLIPYKDSISW 495
Query: 118 NLVIGALVNCQRMDLAESYFKEMG----ARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
N + L + A K M D S++ +N R E K +
Sbjct: 496 NALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINA-CSNIRATETGKQIHCLAI 554
Query: 174 K-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
K + + +I Y +G V + +F ++ + LI G V + D AI
Sbjct: 555 KYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQ 614
Query: 229 YFKQMPETCEK----TWNSIISVL---IRNGLVKEAHSYLEKYP--YSNIASWTNVIVGY 279
F+Q+ + K T++SI+S + + + K+ H Y K Y + ++ Y
Sbjct: 615 LFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIY 674
Query: 280 FEMGEVGSAIKVF-ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ + A K+ E+ +++ W +I G +N G+ L F +M+ D ATF
Sbjct: 675 LKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATF 734
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP- 397
SVL CSD+ G++IH K + T ++A+I MY++CG++ S+ F +
Sbjct: 735 ASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKN 794
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
DI+ WNS+I G A +GYA++AL LF++M KPD++TF+GVL AC+++GL+ +GR+
Sbjct: 795 KQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRH 854
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI--RADGIEVSPTVWGALLG 515
+F M+ Y L PR HY C +DLLGR G + EA ++++ R DG+ VW L
Sbjct: 855 FFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGV-----VWATYLA 909
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
ACR+H + + G+IA +++ELEP S Y++L+ ++ + G +AK M+E GV K
Sbjct: 910 ACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKF 969
Query: 576 PGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILFDAY 623
PGCSWI + + +FL D HP R+ +L L ++++ D Y
Sbjct: 970 PGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKKDNDIDEY 1017
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 156/607 (25%), Positives = 259/607 (42%), Gaps = 102/607 (16%)
Query: 33 KNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISG 92
K+GF + C + DM+ + +V A+ VFDG+ D + W+SMI+
Sbjct: 186 KSGFSSSVFC---EAALVDMYA---------KCGDVPNARRVFDGIACPDTICWSSMIAC 233
Query: 93 YVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV 152
Y G EAL +F RMD K A D + ++
Sbjct: 234 YHRVGCYQEALALF---------------------SRMD------KMGSAPDQVTLVTII 266
Query: 153 NGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
+ L GR+ A L KMP AWN +I+G+ +G L+ +D+ SW
Sbjct: 267 STLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY-----KDMRSW-- 319
Query: 213 LINGLVNSRRIDAA-ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
GL +R A+ +S M E +V+ +GL +N+
Sbjct: 320 ---GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVM--HGLD------------ANVFV 362
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
+++I Y + G A VF+L +++ +WN M+ G +N+L EE ++ F M
Sbjct: 363 GSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTL 422
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
D TF S+L C+ L + LG+Q+H IK + V+NA + MY++ G I A
Sbjct: 423 QTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKA 482
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
FS +P D ISWN++ GLA + E+A+ + +RMRL PDD++F ++ACS
Sbjct: 483 LFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRA 542
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI----------------------- 488
+ G+ C+ KY + A + ++DL + G +
Sbjct: 543 TETGK-QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIA 601
Query: 489 --------DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEP 538
DEA+ L ++ DG++ S + ++L C N +G+ ++ +
Sbjct: 602 GFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLY 661
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+++ + + L +YL EDA ++ +M ++ E W I G GD S
Sbjct: 662 DDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFE----WTAIISGYAQNGYGDHSLV 717
Query: 599 KFHRLRY 605
F R+R+
Sbjct: 718 SFWRMRH 724
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 212/454 (46%), Gaps = 35/454 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAG 61
+ A+ +FD + DT+ W+ MI Y + G A+ LF++M + D T T+I+
Sbjct: 209 VPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIIST 268
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
L S + A + M V WN++ISG+ +GL L ++ KD+ SW L
Sbjct: 269 LASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLY-----KDMRSWGLWP 323
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
S F M S + V EG+ + A + + A +V +
Sbjct: 324 -----------TRSTFASM-----LSAAANMKAFV-EGQQMHAAAVMHGLDA-NVFVGSS 365
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETC 237
+I Y GC A+++F ++++ W ++ G V + + AI F+ M +T
Sbjct: 366 LINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTD 425
Query: 238 EKTWNSII---SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFE 293
E T+ SI+ + L L K+ H K N + Y + G +G A +F
Sbjct: 426 EFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFS 485
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
L+ +D WN + GL +N EE + +M+ G +PD+ +F++ + CS++ +
Sbjct: 486 LIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATET 545
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
G+QIH AIK V +++I +Y++ G+++S+ F+ V I+ N++I G
Sbjct: 546 GKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQ 605
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
+ ++A++LF+++ KP +TF +LS CS
Sbjct: 606 NNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 639
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 130/551 (23%), Positives = 230/551 (41%), Gaps = 83/551 (15%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYN 56
+ R+ A L KMP TV WN +I G+ ++G N + L+ M P R F
Sbjct: 272 SGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASM 331
Query: 57 TVIAGLMQS-----------------DNV----------------QGAKEVFDGMEVRDV 83
A M++ NV AK VFD +++
Sbjct: 332 LSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNI 391
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYFKE 139
V WN+M++G+V N L +EA+R+F M D ++ ++GA L +
Sbjct: 392 VMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQ-VHC 450
Query: 140 MGARDVASWTIMVNGLV-----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ ++ ++ V + G I +A+ LF +P KD +WN + G N
Sbjct: 451 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 510
Query: 195 AEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR 250
A + ++M +T S+ IN N R + T I + I+
Sbjct: 511 AVCMLKRMRLHGITPDDVSFSTAINACSNIRATE---------------TGKQIHCLAIK 555
Query: 251 NGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
G+ SN A +++I Y + G+V S+ K+F + + N +I G
Sbjct: 556 YGIC------------SNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGF 603
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA-RNQF 369
+N+ +E ++ F Q+ + G P + TF+S+L+ CS +G+Q+H +K
Sbjct: 604 VQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDD 663
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMR 428
T + ++ +Y + ++ A + +P H ++ W +II G A +GY + +L F RMR
Sbjct: 664 TLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMR 723
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
+ + D+ TF VL ACS G+ + F +A + ++D+ + G +
Sbjct: 724 HCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETA-TSALIDMYSKCGDV 782
Query: 489 DEAMNLLNEIR 499
+ E++
Sbjct: 783 ISSFEAFKELK 793
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 6/237 (2%)
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
+G PD VL+ CS + L GRQ+H +K + A++ MYA+CG++ +
Sbjct: 152 AGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPN 211
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F + D I W+S+I G ++AL LF RM PD +T V ++S +
Sbjct: 212 ARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS 271
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
+G +D M P + + V+ + GL + L ++R+ G+ + +
Sbjct: 272 SGRLDHATALLKKMPT-----PSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRS 326
Query: 509 VWGALL-GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ ++L A + ++ ++ VM N V L +Y CG DAK +F
Sbjct: 327 TFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF 383
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 184/640 (28%), Positives = 315/640 (49%), Gaps = 38/640 (5%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYNTVIAGL 62
A+ +FD++P D +N +IR Y G A+ L+ M P + +T+ V+
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK--YTFPFVLKAC 110
Query: 63 MQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+++ + + G+ D+ ++I Y+ A VF MP++DVV+W
Sbjct: 111 SALVDLRAGRTIHAHAAAAGLHT-DLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAW 169
Query: 118 NLVIGALVNCQRMDLAESYFKEM----GARDVASWTIMV------NGLVREGRIVEARKL 167
N ++ N A ++ +M G R AS + + +G + +G + A L
Sbjct: 170 NAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCL 229
Query: 168 FDKMPAKDVQAW--NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
+ + Q ++ Y + A +F M R+ +W LI G V R+
Sbjct: 230 RACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTE 289
Query: 226 AISYFKQM--PETCEKTWNSIISVLIRNGLVKEAHSYLEKYP-------YSNIASWTNVI 276
A + FK M C + S+ S L + + H + + ++++ + +++
Sbjct: 290 AFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLL 349
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A F+ + +D + ++ G +N EE F +M+ PD A
Sbjct: 350 SMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIA 409
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T S++ CS L L G+ H I T++ N++I MYA+CG I + F +
Sbjct: 410 TMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKM 469
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
P D++SWN++I G HG ++A LF M+ F PDD+TF+ +++ACS++GLV +G+
Sbjct: 470 PARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGK 529
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
++FD M +KY + PR HY C+VDLL R GL+DEA I++ ++ VWGALLGA
Sbjct: 530 HWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQF---IQSMPLKADVRVWGALLGA 586
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
CRIH NI +G+ + +L P +G +++L+ ++ + GR ++A + K G KK P
Sbjct: 587 CRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSP 646
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
G SWI+IN H F+ GD SHP + + L+ + +I++
Sbjct: 647 GYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKK 686
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 204/467 (43%), Gaps = 75/467 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYN-TVI 59
+R AR A+N+F KMP RD V WN M+ GY +G +A+ M + N + +
Sbjct: 146 IRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTL 205
Query: 60 AGLMQSDNVQGAKEVFDGMEVR-------------DVVTWNSMISGYV-CNGLIDEALRV 105
L+ GA +F G + V+ +++ Y C L+ A RV
Sbjct: 206 VSLLPLLAQHGA--LFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLV-YACRV 262
Query: 106 FHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM--------GARDVASWTIMVNGLVR 157
FHGMP+++ V+W+ +IG V C RM A + FK+M A VAS + L
Sbjct: 263 FHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLAD 322
Query: 158 EGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
+ L K D+ A N +++ Y G + A F ++ +D S+ L++G
Sbjct: 323 LHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSG 382
Query: 217 LVNSRRIDAAISYFKQMPETC--EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTN 274
V + + + A FK+M + C E +++S++ A S+L + + +
Sbjct: 383 CVQNGKAEEAFLVFKKM-QACNMEPDIATMVSLI-------PACSHLAALQHGKCSHGSV 434
Query: 275 VIVG--------------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+I G Y + G++ + +VF+ M RDV WN MI G G + LG+E
Sbjct: 435 IIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEAT 494
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN------ 374
F+ MK G +PD+ TF ++ CS H+ + ++ F T+++
Sbjct: 495 TLFLGMKNQGFAPDDVTFICLIAACS-----------HSGLVTEGKHWFDTMTHKYGILP 543
Query: 375 ------AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYH 414
M+ + AR G + A S+P+ D+ W +++ H
Sbjct: 544 RMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIH 590
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 205/493 (41%), Gaps = 86/493 (17%)
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFK 138
EV+D W + ++ G + A +VF +P D ++N +I A A ++
Sbjct: 30 EVKDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYR 89
Query: 139 EM--------------------------GAR-------------DVASWTIMVNGLVREG 159
M R D+ T +++ +R
Sbjct: 90 SMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCA 149
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
R AR +F KMP +DV AWN M+AGY ++G A M D GL
Sbjct: 150 RFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDH---------GGL-- 198
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA---HSY-----LEKYPYSNIAS 271
R +A+ T S++ +L ++G + + H+Y LE+ +
Sbjct: 199 --RPNAS-------------TLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNE-EQVLI 242
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
T ++ Y + ++ A +VF M R+ W+ +I G D E F M G
Sbjct: 243 GTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGL 302
Query: 332 SPDNAT-FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
+AT S L +C+ L L +G Q+HA K + T SN++++MYA+ G I A
Sbjct: 303 CFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEAT 362
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
+ F + + D IS+ +++ G +G AE+A +F++M+ + +PD T V ++ ACS+
Sbjct: 363 MFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLA 422
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYT---CVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
+ G+ C ++ + + ++D+ + G ID + + +++ A +
Sbjct: 423 ALQHGK----CSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDV---- 474
Query: 508 TVWGALLGACRIH 520
W ++ IH
Sbjct: 475 VSWNTMIAGYGIH 487
>gi|357490817|ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517031|gb|AES98654.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 206/680 (30%), Positives = 328/680 (48%), Gaps = 74/680 (10%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PE------------- 49
A+ +F++M R+ TW+ MI G +N + LF M P+
Sbjct: 136 ARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGK 195
Query: 50 -RDMFT-------------------YNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
RD+ T N+++A + + AK++FD M+ RD V WN+M
Sbjct: 196 CRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAM 255
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEMG---- 141
ISG+ NG I +A + F M V V+WN++I DLA ++M
Sbjct: 256 ISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGI 315
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY------LDNGCVGVA 195
A DV +WT M++G ++GRI A L +M V+A N+ IA L + +G+
Sbjct: 316 APDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLE 375
Query: 196 -EDLFQKMHDRD-LTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
+ KM+ D + LI+ + AA F M E +WNSII + G
Sbjct: 376 IHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGF 435
Query: 254 VKEAHSYLEKYPYS----NIASWTNVIVGYFEMGEVGSAIKVFELM-----TTRDVTVWN 304
+AH K S NI +W +I GY + G A+ +F+ + T R+ WN
Sbjct: 436 CGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWN 495
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
+I G ++ ++ L+ F M+ P++ T S+L +C++L ++IH A++
Sbjct: 496 SLISGFVQSGQKDKALQIFRNMQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRR 555
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
+VSN +I YA+ GN+ + F+ + D +SWNS++ HG +E AL+LF
Sbjct: 556 ILVSELSVSNLLIDSYAKSGNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLF 615
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
+MR +P+ TF +L A +AG+VD+G+ F C+ Y ++ HY+ +V LLGR
Sbjct: 616 YQMRKQGLQPNRGTFASILLAYGHAGMVDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGR 675
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G + EA++ I++ IE + +VWGALL ACRIH N V +AG+R++E EP N+
Sbjct: 676 SGKLAEALDF---IQSMPIEPNSSVWGALLTACRIHRNFGVAVLAGKRMLEFEPGNNITR 732
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
+L++ Y CG+ F E V K G SWI+ N+ H F+ GD S+P +L
Sbjct: 733 HLLSQAYSLCGK-------FEPEGEKAVNKPIGQSWIERNNVVHTFVVGDQSNPYLDKLH 785
Query: 605 YLLNLLHTEIEREILFDAYY 624
L + ++ + + Y
Sbjct: 786 SWLKRVAVNVKTHVSDNELY 805
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 137/537 (25%), Positives = 214/537 (39%), Gaps = 108/537 (20%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRG-----YFKNGFLDNAMCLFNQMPERDMFTYNTV 58
R E L M R + W+ +R Y K G +D A +F+ M ERD +N +
Sbjct: 196 CRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAM 255
Query: 59 IAGLMQSDNVQGAKEVFDGME--------------------------------------- 79
I+G Q+ + A++ FD M+
Sbjct: 256 ISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGI 315
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV------------------------- 114
DV TW SMISG+ G I AL + M L V
Sbjct: 316 APDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLE 375
Query: 115 -----VSWNLVIGALV---------NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGR 160
V NLV LV C + A+ F M RDV SW ++ G + G
Sbjct: 376 IHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGF 435
Query: 161 IVEARKLFDKMPAKD----VQAWNLMIAGYLDNGCVGVAEDLFQKMH-----DRDLTSWK 211
+A +LF KM D + WN+MI GY+ +G A DLF+ + R+ SW
Sbjct: 436 CGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWN 495
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNS--IISV------LIRNGLVKEAHSYLEK 263
LI+G V S + D A+ F+ M + C NS I+S+ L+ + VKE H + +
Sbjct: 496 SLISGFVQSGQKDKALQIFRNM-QFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVR 554
Query: 264 YPYSNIASWTNVIV-GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ S +N+++ Y + G + + +F ++ +D WN M+ + E L
Sbjct: 555 RILVSELSVSNLLIDSYAKSGNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDL 614
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMITMY 380
F QM++ G P+ TF S+L +D G+ + + K + R S AM+ +
Sbjct: 615 FYQMRKQGLQPNRGTFASILLAYGHAGMVDEGKSVFSCITKDYLVRQGMEHYS-AMVYLL 673
Query: 381 ARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
R G + AL S+PI S W +++ H + + R+ +F+P +
Sbjct: 674 GRSGKLAEALDFIQSMPIEPNSSVWGALLTACRIH--RNFGVAVLAGKRMLEFEPGN 728
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 200/468 (42%), Gaps = 50/468 (10%)
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD---- 204
T +V+ + G + ARK+F++M +++ W+ MI G N G LF M
Sbjct: 121 TKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVL 180
Query: 205 ----------------RDLTSWKQLINGLVNSR--------------------RIDAAIS 228
RDL + + LI+ +V R +D A
Sbjct: 181 PDEFLLPKVLQACGKCRDLETGR-LIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKK 239
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY----SNIASWTNVIVGYFEMGE 284
F M E WN++IS +NG + +A Y + ++ +W +I Y ++G
Sbjct: 240 IFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGH 299
Query: 285 VGSAIKVFELM----TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
AI + M DV W MI G + L +M +G +N T S
Sbjct: 300 CDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIAS 359
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
+ C+ L +L +G +IH+ A+K+ V N++I MY +CG++++A F + D
Sbjct: 360 AASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERD 419
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+ SWNSII G G+ KA ELF +M+ +D P+ IT+ +++ +G DQ F
Sbjct: 420 VYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFK 479
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC-RI 519
++ + +A + ++ + G D+A+ + ++ I + ++L C +
Sbjct: 480 SIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNSVTILSILPVCANL 539
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ KV EI V + + V +L + Y G +K IF ++
Sbjct: 540 VASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNIFNEL 587
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 143/321 (44%), Gaps = 6/321 (1%)
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
KE HS + N T ++ Y + G +G A KVF M+ R++ W+ MI G N
Sbjct: 103 KELHSRIGLVENVNPFVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNK 162
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
E + F M G PD VL C L+ GR IH+ I+ + N
Sbjct: 163 SWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRN 222
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
+++ +YA+CG + A F + D ++WN++I G +G +A + F+ M+ +P
Sbjct: 223 SIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEP 282
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNK--YFLQPRSAHYTCVVDLLGRFGLIDEAM 492
+T+ ++S + G D D M+ + + P +T ++ + G I A+
Sbjct: 283 SLVTWNILISCYNQLGHCDLA---IDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHAL 339
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMY 551
+LL E+ G+E + + AC ++ +G EI V +N V L +MY
Sbjct: 340 DLLKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMY 399
Query: 552 LSCGRREDAKRIFAQMKENGV 572
CG + A+ IF M E V
Sbjct: 400 CKCGDLKAAQHIFDMMSERDV 420
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 94/235 (40%), Gaps = 41/235 (17%)
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
E + + E G T+ ++L C D + +G+++H++ I + N V +
Sbjct: 65 SEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELHSR-IGLVENVNPFVETKL 123
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
++MYA+CG + A F+ + + ++ +W+++I G + + + + LF M PD+
Sbjct: 124 VSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDE 183
Query: 437 ITFVGVLSACS---------------------------------YA--GLVDQGRYYFDC 461
VL AC YA G +D + FDC
Sbjct: 184 FLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDC 243
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
M + S + ++ + G I +A + ++ DG+E S W L+
Sbjct: 244 MDER-----DSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISC 293
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
++ + ++N+F+++ +D V+WN M+ Y +G ++A+ LF QM ++ + T+ +
Sbjct: 573 KSGNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFAS 632
Query: 58 VIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++ + V K VF D + + + +++M+ +G + EAL MP++
Sbjct: 633 ILLAYGHAGMVDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIE 692
Query: 113 DVVSWNLVIGALVNCQRM 130
S V GAL+ R+
Sbjct: 693 PNSS---VWGALLTACRI 707
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 486 GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL 545
G + EA+ +L+ + G V P + LL +C + I +G+ R+ +E N V
Sbjct: 62 GSLSEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELHSRIGLVENVNPFVET 121
Query: 546 ILTEMYLSCGRREDAKRIFAQM 567
L MY CG A+++F +M
Sbjct: 122 KLVSMYAKCGLLGMARKVFNEM 143
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/446 (35%), Positives = 247/446 (55%), Gaps = 38/446 (8%)
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM----PETCEKTWNSIIS------- 246
+F + ++ S+ +I+ V SR D A Y+ QM E T++S++
Sbjct: 101 VFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESG 160
Query: 247 ---------------VLIRNGLVKE---------AHSYLEKYPYSNIASWTNVIVGYFEM 282
+ +R GLV A +K P ++ S T ++ Y +M
Sbjct: 161 KVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKM 220
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
GE+ A +FE M RDV WNVMI G ++ + E LK F +M + P+ T +VL
Sbjct: 221 GELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVL 280
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
+ C L L+ GR IH+ V A+I MY++CG+++ A L F + D++
Sbjct: 281 SACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVV 340
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
+WNS+I G A HG+++ AL+LFE M T KP DITF+G+LSAC + GLV++GR +F M
Sbjct: 341 AWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLM 400
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
++KY ++P+ HY C+V+LLGR G ++EA L+ + I P +WG LLG CR+H N
Sbjct: 401 RDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMT---IAADPVLWGTLLGCCRLHVN 457
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
IK+GE + +++ + NSG Y++L+ MY + G E ++ MKE+G++KE GCS I+
Sbjct: 458 IKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIE 517
Query: 583 INDGGHVFLSGDSSHPKFHRLRYLLN 608
+++ H F++G+ HPK + +LN
Sbjct: 518 VDNKVHEFVAGERKHPKSKEIYVMLN 543
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 183/397 (46%), Gaps = 51/397 (12%)
Query: 29 RGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
R Y G LD ++ +FN E ++F+++ +I +QS +FD R ++
Sbjct: 87 RSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQS-------RLFD----RAFGYYSQ 135
Query: 89 MIS-GYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVAS 147
M+S G N ++ + S +L G +++CQ + L +G+ D+
Sbjct: 136 MLSCGVEPNAFTFSSV----------LKSCSLESGKVLHCQAIKLG------LGS-DLYV 178
Query: 148 WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL 207
T +V+ R G +V AR+LFDKMP + + + M+ Y G + A LF+ M +RD+
Sbjct: 179 RTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDV 238
Query: 208 TSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVLIRNGLVKEA---H 258
W +I G S + ++ F++M P E T +++S + G ++ H
Sbjct: 239 VCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPN--EVTVLAVLSACGQLGALESGRWIH 296
Query: 259 SYLE-KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
SY+E K N+ T +I Y + G + A VF+ + +DV WN MI G + +
Sbjct: 297 SYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQ 356
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--- 374
L+ F +M E+G P + TF +L+ C ++ GR ++ R+++
Sbjct: 357 HALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSF----FRLMRDKYGIEPKIEH 412
Query: 375 --AMITMYARCGNIQSALLEFSSVPI-HDIISWNSII 408
M+ + R G+++ A ++ I D + W +++
Sbjct: 413 YGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLL 449
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 36/252 (14%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y +G + ++ VF +V ++ +I ++ L + ++ QM G P+ TF
Sbjct: 89 YAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTF 148
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP- 397
+SVL CS L+ G+ +H QAIK+ V ++ +YAR G++ A F +P
Sbjct: 149 SSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPE 204
Query: 398 ------------------------------IHDIISWNSIICGLAYHGYAEKALELFERM 427
D++ WN +I G A G ++L+LF RM
Sbjct: 205 RSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRM 264
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
+ P+++T + VLSAC G ++ GR+ ++NK +Q T ++D+ + G
Sbjct: 265 LVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENK-GIQINVHVGTALIDMYSKCGS 323
Query: 488 IDEAMNLLNEIR 499
+++A + + IR
Sbjct: 324 LEDARLVFDRIR 335
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 48/278 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R + A+ LFDKMP+R V+ M+ Y K G LD A LF M ERD+ +N
Sbjct: 188 RGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNV---- 243
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-V 120
MI GY +G+ +E+L++F M + + + V
Sbjct: 244 ---------------------------MIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTV 276
Query: 121 IGALVNCQRMDLAE------SYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPA 173
+ L C ++ E SY + G + +V T +++ + G + +AR +FD++
Sbjct: 277 LAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRD 336
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKM----HDRDLTSWKQLINGLVNSRRIDAAISY 229
KDV AWN MI GY +G A LF++M H ++ +++ + ++ S+
Sbjct: 337 KDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSF 396
Query: 230 FKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLE 262
F+ M E + + ++++L R G ++EA+ ++
Sbjct: 397 FRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVK 434
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++A+ +FD++ +D V WN MI GY +GF +A+ LF +M E + G++ +
Sbjct: 324 LEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSA 383
Query: 66 DN----VQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPL-KD 113
V+ + F M RD I Y C G ++EA + M + D
Sbjct: 384 CGHGGLVEEGRSFFRLM--RDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAAD 441
Query: 114 VVSWNLVIGALVNCQRMDL 132
V W G L+ C R+ +
Sbjct: 442 PVLW----GTLLGCCRLHV 456
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 193/641 (30%), Positives = 320/641 (49%), Gaps = 40/641 (6%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLD---NAMCLFNQ--MPERDMFTYNTV 58
+ +A +FD + +D V+WN +I + + + M LF Q M + +
Sbjct: 59 SHFSKANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHT 118
Query: 59 IAGLMQ-----SDNVQGAKEVFDGMEV---RDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
+ G+ SD+ G + ++ DV +S+++ Y GL+ EA +F MP
Sbjct: 119 LTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMP 178
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVAS------WTIMVNGL-----VREG 159
++ VSW +I + + D A FK M + +T +++ L V G
Sbjct: 179 ERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTG 238
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
R V + + + + V N ++ Y+ G + A F+ +++ +W ++ G
Sbjct: 239 RQVHSLAMKNGLVCI-VSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQ 297
Query: 220 SRRIDAAISYFKQMPETCE-KTWNSIISVL--------IRNGLVKEAHSYLEKYPYS-NI 269
D A+ F M ++ E + +++ V+ I G ++ H Y K Y +
Sbjct: 298 FGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEG--RQMHGYSLKLGYELQL 355
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
+ ++ Y + G + A K FE + DV +W +I G +N E L + +M+
Sbjct: 356 YVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLG 415
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G P++ T SVL CS+L LD G+Q+HA IK + + +A+ MYA+CG++
Sbjct: 416 GVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDG 475
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F +P D+ISWN++I GL+ +G + LELFE+M L KPD++TFV +LSACS+
Sbjct: 476 YRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHM 535
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
GLVD+G YF M +++ + P HY C+VD+L R G + EA I + ++ +
Sbjct: 536 GLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEF---IESATVDHGLCL 592
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
W LL A + H + +G AGE++MEL S Y++L+ +Y + G+ ED +R+ MK
Sbjct: 593 WRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKA 652
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
GV KEPGCSWI++ HVF+ GD+ HP+ +R L LL
Sbjct: 653 RGVTKEPGCSWIELKSLTHVFVVGDNMHPQIDEIRLGLKLL 693
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 177/393 (45%), Gaps = 23/393 (5%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA 146
NS+I+ Y +A VF + KDVVSWN +I A Q + +A
Sbjct: 49 NSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMA 108
Query: 147 SWTIMVNGLVREGRIVEARKLFDKMPAK-------------DVQAWNLMIAGYLDNGCVG 193
TI+ N G A L D + DV A + ++ Y G V
Sbjct: 109 HKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVF 168
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISV 247
A DLF +M +R+ SW +I+G + D A FK M E + S++S
Sbjct: 169 EARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSA 228
Query: 248 LIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVW 303
L LV ++ HS K I S N +V Y + G + A+K FEL ++ W
Sbjct: 229 LTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITW 288
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
+ M+ G + ++ LK F M +SG P T V+ CSD + GRQ+H ++K
Sbjct: 289 SAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLK 348
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
+ V +A++ MYA+CG+I A F + D++ W SII G +G E AL L
Sbjct: 349 LGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNL 408
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+ +M+L P+D+T VL ACS +DQG+
Sbjct: 409 YGKMQLGGVIPNDLTMASVLKACSNLAALDQGK 441
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 209/467 (44%), Gaps = 55/467 (11%)
Query: 156 VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
+R+GR + AR L Q N +I Y A +F ++++D+ SW LIN
Sbjct: 26 LRKGRALHARILVTG-SFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLIN 84
Query: 216 GLVNSRRIDAAI---SYFKQM---PETCEKTWNSIISVLIRNGLV------KEAHSYLEK 263
+ ++ F+Q+ +T +++ V + ++AH+ K
Sbjct: 85 AFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVK 144
Query: 264 YPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
S ++ + ++++ Y + G V A +F+ M R+ W MI G +L +E +
Sbjct: 145 TACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFEL 204
Query: 323 FVQMK--ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F M+ E G + + FTSVL+ + ++ GRQ+H+ A+K +V+NA++TMY
Sbjct: 205 FKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMY 264
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+CG+++ AL F + I+W++++ G A G ++KAL+LF M + P + T V
Sbjct: 265 VKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLV 324
Query: 441 GVLSACSYAGLVDQGR---------------YYFDCMKNKY---------------FLQP 470
GV++ACS A + +GR Y + + Y QP
Sbjct: 325 GVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQP 384
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
+T ++ + G + A+NL +++ G+ + ++L AC + G+
Sbjct: 385 DVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMH 444
Query: 531 ERVME----LE-PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+++ LE P S L+ MY CG +D RIF +M V
Sbjct: 445 AGIIKYNFSLEIPIGSA----LSAMYAKCGSLDDGYRIFWRMPARDV 487
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 106/271 (39%), Gaps = 56/271 (20%)
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
L C+ L GR +HA+ + T ++N++I +YA+C + A L F S+ D
Sbjct: 16 ALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKD 75
Query: 401 IISWNSIICGLAY---HGYAEKALELFERMRLTD--FKPDDITFVGVL------------ 443
++SWN +I + H + + LF ++ + P+ T GV
Sbjct: 76 VVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAG 135
Query: 444 ---------SACSY--------------AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
+ACS+ GLV + R FD M + + + ++
Sbjct: 136 RQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPER-----NAVSWATMIS 190
Query: 481 LLGRFGLIDEAMNLLNEIRAD--GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
L DEA L +R + G + V+ ++L A + + G +V L
Sbjct: 191 GYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNT----GRQVHSLAM 246
Query: 539 NNSGVYLI-----LTEMYLSCGRREDAKRIF 564
N V ++ L MY+ CG EDA + F
Sbjct: 247 KNGLVCIVSVANALVTMYVKCGSLEDALKTF 277
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 204/674 (30%), Positives = 320/674 (47%), Gaps = 93/674 (13%)
Query: 8 EAQNLFDKMP---QRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVI 59
+A+ FD++P +RD VTWN MI + +NG A+ LF M P + T+ +V+
Sbjct: 60 DAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVL 119
Query: 60 -----AGLMQSDNVQG--------------------------------AKEVF----DGM 78
AGL+ ++V+ A EVF D
Sbjct: 120 DSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEE 179
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDL--AES 135
+VT ++MIS NG E+LR+F+ M L+ + + +++N C + + A +
Sbjct: 180 PSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATA 239
Query: 136 YFKEMG------ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
+ E RD T ++ R + AR FD + + DV +WN M A YL +
Sbjct: 240 FVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQH 299
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR--IDAAISYFKQMPETCEKTWNSIISV 247
A LF++M L+ G+ S I A + P+T I S+
Sbjct: 300 HRPREALVLFERM----------LLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSL 349
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM--TTRDVTVWNV 305
L GL + A + Y + G + A VFE + T RD WN
Sbjct: 350 LEEAGL------------EGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNS 397
Query: 306 MIFGLGENDLGEEGLKFFVQMK-ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
M+ G + LG+E + F M+ E P+ TF +VL + ++ GR+IHA+ +
Sbjct: 398 MLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSN 457
Query: 365 ARNQFTTVSNAMITMYARCGNIQ--SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
T + NA++ MYA+CG++ A+ + SS D+I+W S++ G A +G AE+AL+
Sbjct: 458 GFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALK 517
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
LF M+ +P+ ITF+ L+AC++ G ++QG M + + P S H++C+VDLL
Sbjct: 518 LFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLL 577
Query: 483 GRFGLIDEAMNLLNEI-RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
GR G +DEA LL +AD I W ALL AC+ ++ GE ER+M+L+P +
Sbjct: 578 GRCGRLDEAEKLLERTSQADVI-----TWMALLDACKNSKELERGERCAERIMQLDPEVA 632
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFH 601
Y++L MY + GR +A I M + G++ +PGCS +++N H F +GD SHPK
Sbjct: 633 SSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSE 692
Query: 602 RLRYLLNLLHTEIE 615
+ L LH I+
Sbjct: 693 EIYLELERLHWSIK 706
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 225/506 (44%), Gaps = 63/506 (12%)
Query: 43 LFNQMPERDMFTYNTVIAGLMQS-----DNVQGAKEVFDGM---EVRDVVTWNSMISGYV 94
+ +Q+ +RD F N+V+ + S ++ AK+ FD + RDVVTWN+MIS ++
Sbjct: 29 IHSQISDRD-FEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFL 87
Query: 95 CNGLIDEALRVFH-----GMPLKDVVSWNLVIGALVNCQRMDLAES---YFKEMGA---R 143
NG EAL++F G P + V++ V+ + V + L + + + +GA R
Sbjct: 88 RNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIER 147
Query: 144 DVASWTIMVNGLVREGRIVEARKLF----DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
+ T +V+ + G + +A ++F D+ P+ + + MI+ NG + LF
Sbjct: 148 EAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLF 207
Query: 200 QKMHDRDLTSWKQLINGLVNSRRI----DAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
M+ + ++N+ + A +Q E T ++++
Sbjct: 208 YAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSATRDNVLG--------- 258
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
T ++ Y ++ A F+ + + DV WN M ++
Sbjct: 259 -----------------TTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHR 301
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD---LGRQIHAQAIKIARNQFTTV 372
E L F +M G P ATF + LT C+ P +G++I + + T V
Sbjct: 302 PREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAV 361
Query: 373 SNAMITMYARCGNIQS--ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
+NA + MYA+CG++ A+ E S D I+WNS++ +HG ++A ELF+ M
Sbjct: 362 ANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAE 421
Query: 431 DF-KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
KP+ +TFV VL A + + QGR + + F + + ++++ + G +D
Sbjct: 422 KLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGF-ESDTVIQNALLNMYAKCGSLD 480
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLG 515
+A + ++ ++ +V W +L+
Sbjct: 481 DAQAIFDKSSSNQEDV--IAWTSLVA 504
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P+ +++ CS L L GR+IH+Q + + + NA+I+MY++CG++ A
Sbjct: 5 PNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQA 64
Query: 393 FSSVP---IHDIISWNSIICGLAYHGYAEKALELFERMRLTDF-KPDDITFVGVLSACSY 448
F +P D+++WN++I +G A +AL+LF M P+ +TFV VL +C
Sbjct: 65 FDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVE 124
Query: 449 AGLVD-------QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
AGL+ GR ++ + F++ T +VD G+ G +D+A + +
Sbjct: 125 AGLLSLEDVRAIHGRIVGAGIEREAFVR------TALVDSYGKLGSLDDAWEVFLRKSDE 178
Query: 502 GIEVSPTVWGALLGAC 517
S A++ AC
Sbjct: 179 EPSTSLVTCSAMISAC 194
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 195/641 (30%), Positives = 327/641 (51%), Gaps = 36/641 (5%)
Query: 4 ARIQEAQNLFDKMPQR-DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
+R EA +LF K+ R + V WNVMI G+ +NG + ++ L++ + V A
Sbjct: 191 SRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENC---KLVSASF 247
Query: 63 MQSDNVQGAKEVFD-GMEVR-DVVTWNSMISGYVC---------NGLIDEALRVFHGMPL 111
+ EV D G +V DV+ N YVC +G +++A +VF +
Sbjct: 248 TGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLD 307
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEM--GARDVASWTIM-------VNGLVREGRIV 162
K+V N +I A + R A + +M G V S+TI V G GR V
Sbjct: 308 KEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTV 367
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
A + M + +V + ++ Y G A+ +F M +RD+ +W +I G +RR
Sbjct: 368 HAEVIKRSMQS-NVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRR 426
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE-------AHSY-LEKYPYSNIASWTN 274
A+ F+ M + K + +++ +I GL E H + +++ S++ +
Sbjct: 427 FKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACS 486
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ Y + G SA VF M +++ WN MI N L E + Q+ + G D
Sbjct: 487 LVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLD 546
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ + T+VL S + L G+ +HA I++ V NA+I MY +CG ++ A L F
Sbjct: 547 SVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFE 606
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
++P ++++WNS+I G HG E+A+ LF+ M+ ++ PD++TF+ ++++CS++G+V++
Sbjct: 607 NMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEE 666
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
G F M+ +Y ++PR HY VVDLLGR G +D+A + IR I+ +VW LL
Sbjct: 667 GLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSF---IRGMPIDADRSVWLCLL 723
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
ACR H N+++GE+ + ++++EP Y+ L +Y + A + A MK G+KK
Sbjct: 724 FACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKK 783
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
PGCSWI++ + VF SGDSS + + L+ L + +E
Sbjct: 784 SPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNME 824
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 220/484 (45%), Gaps = 61/484 (12%)
Query: 9 AQNLFDKMPQR-----DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-------------- 49
A +FDKM + D WN +I GYFK G + + F +M E
Sbjct: 109 ALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELSWYMAGRQIHGYI 168
Query: 50 -RDMFT----YNTVIAGLMQS-DNVQGAKEVFDGMEVR-DVVTWNSMISGYVCNGLIDEA 102
R+MF T + G+ S A +F +E R ++V WN MI G+V NG+ +++
Sbjct: 169 IRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKS 228
Query: 103 LRVFHGMPLKD--VVSWNLVIGALVNCQRMDLAE-------SYFKEMGARDVASWTIMVN 153
L ++ ++ +VS + GA C ++ + K D T ++
Sbjct: 229 LELYSLAKNENCKLVSASFT-GAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLT 287
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL 213
+ G + +A+K+FD++ K+V+ N MI+ ++ NG A L+ KM +
Sbjct: 288 MYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETP----- 342
Query: 214 INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS-YLEKYPYSNIASW 272
V+S I + +S C SV+ + H+ +++ SN+A
Sbjct: 343 ----VDSFTISSLLS-------GC--------SVVGSYDFGRTVHAEVIKRSMQSNVAIQ 383
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+ ++ Y++ G A VF M RDV W MI G +N ++ L F M++ G
Sbjct: 384 SALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVK 443
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
D+ TSV++ L ++LG IH AIK V+ +++ MY++ G +SA +
Sbjct: 444 ADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMV 503
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
FSS+P ++++WNS+I +++G E ++ L ++ F D ++ VL A S +
Sbjct: 504 FSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAAL 563
Query: 453 DQGR 456
+G+
Sbjct: 564 LKGK 567
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 132/613 (21%), Positives = 241/613 (39%), Gaps = 98/613 (15%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
N I+ + G A+ L ++ P + FT+ +++ N+ + + +
Sbjct: 24 NSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVT 83
Query: 81 ----RDVVTWNSMISGYVCNGLIDEALRVFHGM-----PLKDVVSWNLVIGALVNCQRMD 131
D S+I+ YV GL+ AL+VF M D+ WN VI +
Sbjct: 84 MGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFE 143
Query: 132 LAESYFKE-------MGARDVASW-------------TIMVNGLVREGRIVEARKLFDKM 171
+ F M R + + T ++ R +EA LF K+
Sbjct: 144 EGLAQFCRMQELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKL 203
Query: 172 PAK-DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
+ ++ AWN+MI G+++NG + +L+ + + G + + +
Sbjct: 204 ENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFG 263
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+Q+ C+ V+ N + PY T+++ Y + G V A K
Sbjct: 264 RQV--HCD--------VIKMN---------FQDDPY----VCTSLLTMYAKSGSVEDAKK 300
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
VF+ + ++V + N MI N + L + +MK D+ T +S+L+ CS + +
Sbjct: 301 VFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGS 360
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
D GR +HA+ IK + + +A++TMY +CG+ + A F ++ D+++W S+I G
Sbjct: 361 YDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAG 420
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLS-------------------------- 444
+ + AL+LF M K D V+S
Sbjct: 421 FCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESD 480
Query: 445 ---ACSYA------GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
ACS G + F M NK + + ++ GL + ++NLL
Sbjct: 481 VFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVA-----WNSMISCYSWNGLPEMSINLL 535
Query: 496 NEIRADGIEV-SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
+I G + S ++ L+ + +K + ++ P++ V L +MY+ C
Sbjct: 536 PQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKC 595
Query: 555 GRREDAKRIFAQM 567
G + A+ IF M
Sbjct: 596 GCLKYAQLIFENM 608
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 163/387 (42%), Gaps = 77/387 (19%)
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
F + +TC N I +V L+ PY IA T++I Y + G +GSA+
Sbjct: 58 FPSLLKTCASLSNLYHGRTIHASIVTMG---LQSDPY--IA--TSLINMYVKCGLLGSAL 110
Query: 290 KVFELMTTR-----DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+VF+ M+ D+TVWN +I G + EEGL F +M+E
Sbjct: 111 QVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQE---------------- 154
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIH-D 400
L GRQIH I RN F + A+I MY+ C A F + +
Sbjct: 155 ---LSWYMAGRQIHGY---IIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSN 208
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-YYF 459
I++WN +I G +G EK+LEL+ + + K +F G +ACS+ ++D GR +
Sbjct: 209 IVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHC 268
Query: 460 DCMKNKYFLQPRSAHYTC--VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
D +K + P Y C ++ + + G +++A + +++ +E+ + A +G
Sbjct: 269 DVIKMNFQDDP----YVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNG 324
Query: 518 R------IHNNIKVGE--------------------------IAGERVMELEPNNSGVYL 545
R ++N +K GE + E + +N +
Sbjct: 325 RAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQS 384
Query: 546 ILTEMYLSCGRREDAKRIFAQMKENGV 572
L MY CG EDA +F MKE V
Sbjct: 385 ALLTMYYKCGSTEDADSVFYTMKERDV 411
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 178/413 (43%), Gaps = 64/413 (15%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
++ +++A+ +FD++ ++ N MI + NG +A+ L+N+M D FT ++
Sbjct: 291 KSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISS 350
Query: 58 VIAGL--------------------MQSD---------------NVQGAKEVFDGMEVRD 82
+++G MQS+ + + A VF M+ RD
Sbjct: 351 LLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERD 410
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV-------NCQRMDLAES 135
VV W SMI+G+ N +AL +F M + V + + V+ +++ N + L
Sbjct: 411 VVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHG 470
Query: 136 YFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ + G DV +V+ + G A +F MP K++ AWN MI+ Y NG +
Sbjct: 471 FAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEM 530
Query: 195 AEDLFQKM--HDRDLTSWKQLINGLVNSRRIDA--------AISYFKQMPETCEKTWNSI 244
+ +L ++ H L S + LV + A A Q+P + N++
Sbjct: 531 SINLLPQILQHGFYLDS-VSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQ-VENAL 588
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM----TTRDV 300
I + ++ G +K A E P N+ +W ++I GY G A+++F+ M T D
Sbjct: 589 IDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDE 648
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMK-ESGPSPDNATFTSVLTICSDLPTLD 352
+ +I + + EEGL F M+ E G P + SV+ + LD
Sbjct: 649 VTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLD 701
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 125/311 (40%), Gaps = 36/311 (11%)
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
K + L T N I L + + L+ + S + TF S+L C+ L
Sbjct: 10 KFYSLRQTEVSPSINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLS 69
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF-------SSVPIHDII 402
L GR IHA + + ++ ++I MY +CG + SAL F S P DI
Sbjct: 70 NLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAP--DIT 127
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTD----------------FKPD---DITFVGVL 443
WN +I G +G+ E+ L F RM+ F+ D + +G+
Sbjct: 128 VWNPVIDGYFKYGHFEEGLAQFCRMQELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMY 187
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
S+CS + F ++N+ + + ++ G+ ++++ L + + +
Sbjct: 188 SSCSRPM---EAWSLFGKLENRSNI----VAWNVMIGGFVENGMWEKSLELYSLAKNENC 240
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGRREDAKR 562
++ + AC + G V+++ ++ V L MY G EDAK+
Sbjct: 241 KLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKK 300
Query: 563 IFAQMKENGVK 573
+F Q+ + V+
Sbjct: 301 VFDQVLDKEVE 311
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 239/428 (55%), Gaps = 6/428 (1%)
Query: 175 DVQAWNLMIAGYLDNGCVGV--AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
D+ N +I Y G G+ A LF M +RD+ +W +I GLV + A F +
Sbjct: 154 DIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDE 213
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
MP+ +WN+++ + G + A E+ P+ NI SW+ ++ GY + G++ A +F
Sbjct: 214 MPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGDMDMARMLF 273
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ ++V +W +I G E L E + + +M+E+G PD+ S+L C++ L
Sbjct: 274 DRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFLLSILAACAESGMLG 333
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS-VPIHDIISWNSIICGL 411
LG++IHA + V NA I MYA+CG + +A FS + D++SWNS+I G
Sbjct: 334 LGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGF 393
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
A HG+ EKALELF M F+PD TFVG+L AC++AGLV++GR YF M+ Y + P+
Sbjct: 394 AMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQ 453
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
HY C++DLLGR G + EA LL R+ +E + + G LL ACR+HN++ + E
Sbjct: 454 VEHYGCMMDLLGRGGHLKEAFMLL---RSMPMEPNAIILGTLLNACRMHNDVDLARAVCE 510
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
++ +LEP++ G Y +L+ +Y G + + QMK G +K G S I++ + H F
Sbjct: 511 QLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSIEVEEEVHEFT 570
Query: 592 SGDSSHPK 599
D SHPK
Sbjct: 571 VFDQSHPK 578
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 174/369 (47%), Gaps = 41/369 (11%)
Query: 51 DMFTYNTVIAGLMQSDN--VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
D+F N++I + N + GA +F ME RDVVTWNSMI G V G + A ++F
Sbjct: 154 DIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDE 213
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
MP +D+VSWN ++ MD A F+ M R++ SW+ MV G + G + AR LF
Sbjct: 214 MPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGDMDMARMLF 273
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
D+ P K+V W +IAGY + G A +L+ KM + + R D
Sbjct: 274 DRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGM--------------RPDDG-- 317
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGS 287
+ + C ++ +L GL K H+ + ++ + A N + Y + G + +
Sbjct: 318 FLLSILAACAES-----GML---GLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDA 369
Query: 288 AIKVFE-LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A VF +M +DV WN MI G + GE+ L+ F M + G PD TF +L C+
Sbjct: 370 AFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACT 429
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLEFSSVPIHDI 401
++ GR+ K+ + V M+ + R G+++ A + S+P+
Sbjct: 430 HAGLVNEGRKYFYSMEKV----YGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEP- 484
Query: 402 ISWNSIICG 410
N+II G
Sbjct: 485 ---NAIILG 490
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 174/386 (45%), Gaps = 24/386 (6%)
Query: 20 DTVTWNVMIRGYFK--NGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
D N +I Y + N LD AM LF M ERD+ T+N++I GL++ +QGA ++FD
Sbjct: 154 DIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDE 213
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF 137
M RD+V+WN+M+ GY G +D A +F MP +++VSW+ ++ MD+A F
Sbjct: 214 MPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGDMDMARMLF 273
Query: 138 KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN----LMIAGYLDNGCVG 193
++V WT ++ G +G EA +L+ KM ++ + ++A ++G +G
Sbjct: 274 DRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFLLSILAACAESGMLG 333
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRR----IDAAISYFK-QMPETCEKTWNSIISVL 248
+ + + M +++N ++ +DAA F M + +WNS+I
Sbjct: 334 LGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGF 393
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF----EMGEVGSAIKVFELMTTRDVTVWN 304
+G ++A T VG G V K F M V
Sbjct: 394 AMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQ 453
Query: 305 VMIFGLGENDLGEEG-LKFFVQMKESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
V +G + LG G LK + S P P+ ++L C +DL R + Q
Sbjct: 454 VEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNACRMHNDVDLARAVCEQLF 513
Query: 363 KIARN---QFTTVSNAMITMYARCGN 385
K+ + ++ +SN +YA+ G+
Sbjct: 514 KLEPSDPGNYSLLSN----IYAQAGD 535
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 137/277 (49%), Gaps = 23/277 (8%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
NA + A +LF M +RD VTWN MI G + G L A LF++MP+RDM ++NT++ G
Sbjct: 170 NAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEMPDRDMVSWNTMLDGY 229
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI- 121
++ + A E+F+ M R++V+W++M+ GY G +D A +F P+K+VV W +I
Sbjct: 230 AKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIA 289
Query: 122 GALVNCQRMDLAESYFK--EMGARDVASWTIMV------NGLVREGRIVEA--RKLFDKM 171
G + E Y K E G R + + + +G++ G+ + A R+ +
Sbjct: 290 GYAEKGLAREATELYGKMEEAGMRPDDGFLLSILAACAESGMLGLGKRIHASMRRWRFRC 349
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQK-MHDRDLTSWKQLINGLVNSRRIDAAISYF 230
AK + A+ I Y GC+ A D+F M +D+ SW +I G + A+ F
Sbjct: 350 GAKVLNAF---IDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELF 406
Query: 231 KQM------PETCEKTWNSIISVLIRNGLVKEAHSYL 261
M P+T T+ ++ GLV E Y
Sbjct: 407 SWMVQEGFEPDT--YTFVGLLCACTHAGLVNEGRKYF 441
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 140/294 (47%), Gaps = 40/294 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R +Q A LFD+MP RD V+WN M+ GY K G +D A LF +MP R++ +++T++
Sbjct: 199 VRCGELQGACKLFDEMPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVC 258
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVV 115
G + ++ A+ +FD V++VV W ++I+GY GL EA ++ GM D
Sbjct: 259 GYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDD-- 316
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVAS---WTI---------MVNGLVREGRIVE 163
++ L C AES +G R AS W ++ + G +
Sbjct: 317 --GFLLSILAAC-----AESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDA 369
Query: 164 ARKLFDKMPA-KDVQAWNLMIAGYLDNGCVGVAEDLF----QKMHDRDLTSWKQLINGLV 218
A +F M A KDV +WN MI G+ +G A +LF Q+ + D ++ L+
Sbjct: 370 AFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACT 429
Query: 219 NSRRIDAAISYFKQM-------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
++ ++ YF M P+ + + ++ +L R G +KEA L P
Sbjct: 430 HAGLVNEGRKYFYSMEKVYGIVPQV--EHYGCMMDLLGRGGHLKEAFMLLRSMP 481
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 133/331 (40%), Gaps = 68/331 (20%)
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF--FVQMKESGPSPDNATFTSV 341
+ SA+ VF + +V ++N +I N L F F QM+++G PDN T+ +
Sbjct: 68 HLASAVNVFNHVPHPNVHLYNSIIRAHAHNS-SHRSLPFNAFFQMQKNGLFPDNFTYPFL 126
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN---------------- 385
L CS +L L R IHA KI V N++I Y+RCGN
Sbjct: 127 LKACSGPSSLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEER 186
Query: 386 -----------------IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
+Q A F +P D++SWN+++ G A G + A ELFERM
Sbjct: 187 DVVTWNSMIGGLVRCGELQGACKLFDEMPDRDMVSWNTMLDGYAKAGEMDTAFELFERMP 246
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFD-CMKNKYFLQPRSAHYTCVVDLLGRFGL 487
+ +++ ++ S G +D R FD C L +T ++ GL
Sbjct: 247 WRNI----VSWSTMVCGYSKGGDMDMARMLFDRCPVKNVVL------WTTIIAGYAEKGL 296
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGAC----------RIHNNIKVGEI-AGERVMEL 536
EA L ++ G+ ++L AC RIH +++ G +V+
Sbjct: 297 AREATELYGKMEEAGMRPDDGFLLSILAACAESGMLGLGKRIHASMRRWRFRCGAKVLN- 355
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+MY CG + A +F+ M
Sbjct: 356 ---------AFIDMYAKCGCLDAAFDVFSGM 377
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 267/485 (55%), Gaps = 33/485 (6%)
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
S ++EM A ++ + + + RK+F+ MP KD+ +WN +IAG NG G
Sbjct: 227 SEYREMEACNLGQ---QIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGE 283
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
+ ++M +L ++ ++ + IS K+ I IR GL
Sbjct: 284 TLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKE-----------IHGCSIRQGL- 331
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+A Y+ A T V+ Y +VF L+T RD WN +I G +N
Sbjct: 332 -DAEVYVASSLIDMYAKCTRVVDSY----------RVFTLLTERDGISWNSIIAGCVQNG 380
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
L +EGLKFF QM + P + +F+S++ C+ L TL LG+Q+H + ++ +++
Sbjct: 381 LFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIAS 440
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
+++ MYA+CGNI++A F + + D++SW ++I G A HG+A A+ELFE+M+ +P
Sbjct: 441 SLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEP 500
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
+ + F+ VL+ACS+AGLVD+ YF+ M + + P HY V DLLGR G ++EA +
Sbjct: 501 NYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDF 560
Query: 495 LNEIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
+ G+ + PT VW LL ACR+H N+ + E R++E++P N+G Y++L +Y
Sbjct: 561 IC-----GMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYS 615
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
+ R ++A + A ++ G++K P CSWI++ + + F++GD SHP + ++R + +L
Sbjct: 616 AARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLME 675
Query: 613 EIERE 617
+E+E
Sbjct: 676 LMEKE 680
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 170/397 (42%), Gaps = 57/397 (14%)
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
I + S +V +++F+ M +D+V+WN++I+G NGL E L + M ++ +
Sbjct: 241 IKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDS 300
Query: 119 LVIGALVNCQRMDLAESYFKEMGA--------RDVASWTIMVNGLVREGRIVEARKLFDK 170
+ +++ ++ S KE+ +V + +++ + R+V++ ++F
Sbjct: 301 FTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTL 360
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
+ +D +WN +IAG + NG + D L ++Q++ + + + S+
Sbjct: 361 LTERDGISWNSIIAGCVQNG-----------LFDEGLKFFRQMLMAKIKPK----SYSFS 405
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAI 289
MP L L K+ H Y+ + + NI ++++ Y + G + +A
Sbjct: 406 SIMPACAH---------LTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAR 456
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS--- 346
++F+ M RD+ W MI G + + ++ F QMK G P+ F +VLT CS
Sbjct: 457 QIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAG 516
Query: 347 ---------DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+ TLD G I + VS+ + R G ++ A +P
Sbjct: 517 LVDEAWKYFNSMTLDFG-------IAPGVEHYAAVSD----LLGRAGRLEEAYDFICGMP 565
Query: 398 IHDIIS-WNSIICGLAYHGYAEKALELFERMRLTDFK 433
I S W +++ H + A ++ R+ D K
Sbjct: 566 IGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPK 602
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 145/328 (44%), Gaps = 57/328 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
+ + +F+ MP++D V+WN +I G +NG + + +M + D FT ++V+
Sbjct: 250 VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPL 309
Query: 62 LMQSDNVQGAKE-----------------------------------VFDGMEVRDVVTW 86
+ ++ ++ KE VF + RD ++W
Sbjct: 310 IAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISW 369
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAES---YFKE 139
NS+I+G V NGL DE L+ F M + + S++ ++ A + + L + Y
Sbjct: 370 NSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 429
Query: 140 MG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
G ++ + +V+ + G I AR++FD+M +D+ +W MI G +G A +L
Sbjct: 430 NGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIEL 489
Query: 199 FQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLI 249
F++M + + ++ ++ ++ +D A YF M + + ++ +L
Sbjct: 490 FEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLG 549
Query: 250 RNGLVKEAHSYLEKYPYSNIAS-WTNVI 276
R G ++EA+ ++ P S W ++
Sbjct: 550 RAGRLEEAYDFICGMPIGPTGSVWATLL 577
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 49/251 (19%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PE--------- 49
R+ ++ +F + +RD ++WN +I G +NG D + F QM P+
Sbjct: 350 RVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMP 409
Query: 50 -------------------RDMFTYNTVIAGLM-----QSDNVQGAKEVFDGMEVRDVVT 85
R+ F N IA + + N++ A+++FD M +RD+V+
Sbjct: 410 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVS 469
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEMG 141
W +MI G +G +A+ +F M + + V++ V+ A + +D A YF M
Sbjct: 470 WTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMT 529
Query: 142 -----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV-QAWNLMIAGYLDNGCVGVA 195
A V + + + L R GR+ EA MP W +++ + V +A
Sbjct: 530 LDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMA 589
Query: 196 EDLFQKMHDRD 206
E + ++ + D
Sbjct: 590 EKVANRILEVD 600
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 156/379 (41%), Gaps = 47/379 (12%)
Query: 243 SIISVLIRNGL-------VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
++++ L+RN L ++ H+ + K+ S++ + + ++ Y + + ++++F +
Sbjct: 9 ALVNSLLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTL 68
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
W +I + L + L F+ M SG PD+ F SVL C+ L L+LG
Sbjct: 69 HFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGE 128
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYA-----------RCGNIQ---------------SA 389
+H I++ + NA++ MY+ R G Q S
Sbjct: 129 SLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASV 188
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG-VLSACSY 448
L+ + DI ++N + + + + LE+ + R ++++ + +G + S+
Sbjct: 189 LVGNQGRKVSDIEAFNYDVSCRSRE-FEAQVLEIDYKPR-SEYREMEACNLGQQIKDISH 246
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
+ VD R F+ M K + + ++ R GL E + ++ E+ ++
Sbjct: 247 SMSVDSVRKIFEMMPEKDLVS-----WNTIIAGNARNGLYGETLTMVREMGGANLKPDSF 301
Query: 509 VWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
++L + +I G EI G + + V L +MY C R D+ R+F +
Sbjct: 302 TLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLL 361
Query: 568 KENGVKKEPGCSWIQINDG 586
E G SW I G
Sbjct: 362 TE-----RDGISWNSIIAG 375
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
P+ A S+L + + +Q+HAQ +K + + ++++Y+ + +L
Sbjct: 4 PTSTEALVNSLLRNPLSIKSRSQAQQLHAQVLKF-QASSLCNLSLLLSIYSHINLLHDSL 62
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
F+++ ++W S+I HG K+L F M + PD F VL AC+
Sbjct: 63 RLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACA 119
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 195/652 (29%), Positives = 318/652 (48%), Gaps = 56/652 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
+ +A LFD M RD+V+W+VM+ G+ K G N F ++ D +T VI
Sbjct: 129 LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRA 188
Query: 62 LMQSDNVQ--------------GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFH 107
N+Q A+ +FD M+ RD+VTW MI GY G +E+L +F
Sbjct: 189 CRDLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 248
Query: 108 GMPLKDVVSWNLVIGALV-NCQRMD------LAESYFKEMGAR-DVASWTIMVNGLVREG 159
M + VV + + +V C ++ + + Y + + DV T M++ + G
Sbjct: 249 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 308
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLIN 215
+ AR++FD+M K+V +W+ MIA Y +G A DLF+ M D + L+
Sbjct: 309 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 368
Query: 216 GLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK---------EAHSYLEKYPY 266
+N R + Q + ++++ N LV +A+ +
Sbjct: 369 ACINCRNLTQVRQVHAQ-----ASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCV 423
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
+ SW+ ++ G+ ++G+ + F + N + G E L F +M
Sbjct: 424 RDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGN---ANESLVLFDKM 480
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF---TTVSNAMITMYARC 383
+E G PD +V+ C+ L + R I I R +F + AMI M+A+C
Sbjct: 481 REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY---IQRKKFQLDVILGTAMIDMHAKC 537
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G ++SA F + ++ISW+++I YHG KAL+LF M + P+ IT V +L
Sbjct: 538 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLL 597
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
ACS+AGLV++G +F M Y ++ HYTCVVDLLGR G +DEA+ L+ + +
Sbjct: 598 YACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMT---V 654
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI 563
E +WGA LGACR H ++ + E A ++EL+P N G Y++L+ +Y + GR ED +
Sbjct: 655 EKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKT 714
Query: 564 FAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
M + +KK PG +WI++++ H F GD++HP+ + +L L ++E
Sbjct: 715 RDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLE 766
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 143/609 (23%), Positives = 256/609 (42%), Gaps = 101/609 (16%)
Query: 27 MIRGYFKNGFLDNAMCLFNQMPERDMFTY------NTVIAGLMQSDNVQGAKEVFDGMEV 80
++ + F ++ L N+ E F + I+ L+ N+ ++V V
Sbjct: 47 IVESIIETQFRQTSLNLHNREEESSKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQASV 106
Query: 81 R----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL------VNC--- 127
++V N +I Y +D+A +F GM ++D VSW++++G +NC
Sbjct: 107 HGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGT 166
Query: 128 --------QRMDLAESYFKEMGARDVASWTI-MVNGLVREGRIVEARKLFDKMPAKDVQA 178
R D F RD+ + + +V+ V+ I +AR LFDKM +D+
Sbjct: 167 FRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVT 226
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
W +MI GY + G + LF+KM + G+V + + + C
Sbjct: 227 WTVMIGGYAECGKANESLVLFEKMRE----------EGVVPDKVAMVTVVF------ACA 270
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
K + + + ++ + Y+++ + ++ T +I Y + G V SA ++F+ M
Sbjct: 271 K-----LGAMHKARIIDD---YIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEE 322
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
++V W+ MI G + G + L F M SG PD T S+L C + L RQ+
Sbjct: 323 KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQV 382
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII--------- 408
HAQA Q V+N ++ Y+ + A F + + D +SW+ ++
Sbjct: 383 HAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDY 442
Query: 409 ------------CG-------LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
CG L + G A ++L LF++MR PD + V V+ AC+
Sbjct: 443 MNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKL 502
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
G + + R D ++ K F Q T ++D+ + G ++ A + + + E +
Sbjct: 503 GAMHKARTIDDYIQRKKF-QLDVILGTAMIDMHAKCGCVESAREIFDRME----EKNVIS 557
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPN--NSGVY---LILTEMYLSC---GRREDAK 561
W A++ A H G + ++L P SG+ + L + +C G E+
Sbjct: 558 WSAMIAAYGYHGQ-------GRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGL 610
Query: 562 RIFAQMKEN 570
R F+ M E+
Sbjct: 611 RFFSLMWED 619
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 33/255 (12%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+ S L C +L + RQ+HAQA + V+N +I Y+ + A F +
Sbjct: 84 YISALVNCRNLTQV---RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMC 140
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS-----YAGLV 452
+ D +SW+ ++ G A G F + +PD+ T V+ AC LV
Sbjct: 141 VRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALV 200
Query: 453 D---------QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
D R+ FD M+ + + +T ++ G +E++ L ++R +G+
Sbjct: 201 DMYVKCREIEDARFLFDKMQERDLVT-----WTVMIGGYAECGKANESLVLFEKMREEGV 255
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYLIL----TEMYLSCGRR 557
++ AC K+G + R+++ ++ + +IL +MY CG
Sbjct: 256 VPDKVAMVTVVFAC-----AKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCV 310
Query: 558 EDAKRIFAQMKENGV 572
E A+ IF +M+E V
Sbjct: 311 ESAREIFDRMEEKNV 325
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 184/640 (28%), Positives = 315/640 (49%), Gaps = 38/640 (5%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYNTVIAGL 62
A+ +FD++P D +N +IR Y G A+ L+ M P + +T+ V+
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK--YTFPFVLKAC 110
Query: 63 MQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+++ + + G+ D+ ++I Y+ A VF MP++DVV+W
Sbjct: 111 SALVDLRAGRTIHAHAAAAGLHT-DLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAW 169
Query: 118 NLVIGALVNCQRMDLAESYFKEM----GARDVASWTIMV------NGLVREGRIVEARKL 167
N ++ N A ++ +M G R AS + + +G + +G + A L
Sbjct: 170 NAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCL 229
Query: 168 FDKMPAKDVQAW--NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
+ + Q ++ Y + A +F M R+ +W LI G V R+
Sbjct: 230 RACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTE 289
Query: 226 AISYFKQM--PETCEKTWNSIISVLIRNGLVKEAHSYLEKYP-------YSNIASWTNVI 276
A + FK M C + S+ S L + + H + + ++++ + +++
Sbjct: 290 AFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLL 349
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A F+ + +D + ++ G +N EE F +M+ PD A
Sbjct: 350 SMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIA 409
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T S++ CS L L G+ H I T++ N++I MYA+CG I + F +
Sbjct: 410 TMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKM 469
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
P D++SWN++I G HG ++A LF M+ F PDD+TF+ +++ACS++GLV +G+
Sbjct: 470 PARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGK 529
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
++FD M +KY + PR HY C+VDLL R GL+DEA I++ ++ VWGALLGA
Sbjct: 530 HWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQF---IQSMPLKADVRVWGALLGA 586
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
CRIH NI +G+ + +L P +G +++L+ ++ + GR ++A + K G KK P
Sbjct: 587 CRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSP 646
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
G SWI+IN H F+ GD SHP + + L+ + +I++
Sbjct: 647 GYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKK 686
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 204/467 (43%), Gaps = 75/467 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYN-TVI 59
+R AR A+N+F KMP RD V WN M+ GY +G +A+ M + N + +
Sbjct: 146 IRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTL 205
Query: 60 AGLMQSDNVQGAKEVFDGMEVR-------------DVVTWNSMISGYV-CNGLIDEALRV 105
L+ GA +F G + V+ +++ Y C L+ A RV
Sbjct: 206 VSLLPLLAQHGA--LFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLV-YACRV 262
Query: 106 FHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM--------GARDVASWTIMVNGLVR 157
FHGMP+++ V+W+ +IG V C RM A + FK+M A VAS + L
Sbjct: 263 FHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLAD 322
Query: 158 EGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
+ L K D+ A N +++ Y G + A F ++ +D S+ L++G
Sbjct: 323 LHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSG 382
Query: 217 LVNSRRIDAAISYFKQMPETC--EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTN 274
V + + + A FK+M + C E +++S++ A S+L + + +
Sbjct: 383 CVQNGKAEEAFLVFKKM-QACNMEPDIATMVSLI-------PACSHLAALQHGKCSHGSV 434
Query: 275 VIVG--------------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+I G Y + G++ + +VF+ M RDV WN MI G G + LG+E
Sbjct: 435 IIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEAT 494
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN------ 374
F+ MK G +PD+ TF ++ CS H+ + ++ F T+++
Sbjct: 495 TLFLGMKNQGFAPDDVTFICLIAACS-----------HSGLVTEGKHWFDTMTHKYGILP 543
Query: 375 ------AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYH 414
M+ + AR G + A S+P+ D+ W +++ H
Sbjct: 544 RMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIH 590
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 204/493 (41%), Gaps = 86/493 (17%)
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFK 138
EV+D W + ++ G + A +VF +P D ++N +I A A ++
Sbjct: 30 EVKDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYR 89
Query: 139 EMGARDVAS---------------------------------------WTIMVNGLVREG 159
M VA T +++ +R
Sbjct: 90 SMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCA 149
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
R AR +F KMP +DV AWN M+AGY ++G A M D GL
Sbjct: 150 RFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDH---------GGL-- 198
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA---HSY-----LEKYPYSNIAS 271
R +A+ T S++ +L ++G + + H+Y LE+ +
Sbjct: 199 --RPNAS-------------TLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNE-EQVLI 242
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
T ++ Y + ++ A +VF M R+ W+ +I G D E F M G
Sbjct: 243 GTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGL 302
Query: 332 SPDNAT-FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
+AT S L +C+ L L +G Q+HA K + T SN++++MYA+ G I A
Sbjct: 303 CFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEAT 362
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
+ F + + D IS+ +++ G +G AE+A +F++M+ + +PD T V ++ ACS+
Sbjct: 363 MFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLA 422
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYT---CVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
+ G+ C ++ + + ++D+ + G ID + + +++ A +
Sbjct: 423 ALQHGK----CSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDV---- 474
Query: 508 TVWGALLGACRIH 520
W ++ IH
Sbjct: 475 VSWNTMIAGYGIH 487
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 178/593 (30%), Positives = 309/593 (52%), Gaps = 47/593 (7%)
Query: 37 LDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN 96
LD + + N + ++F++N VI G ++S+N Q + +V + M++ C
Sbjct: 103 LDYCIKILNNLQNPNVFSWNAVIRGCVESENPQ-----------KGLVLYKRMLTRAGCR 151
Query: 97 GLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA-------RDVASWT 149
D +++ + C + L+ F+ +G +D+ +
Sbjct: 152 ---------------PDNYTYSFLFKV---CANLVLSYMGFEILGQVLKMGFDKDMYLYN 193
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+++ LV G A K+FD+ +D+ +WN +I GY+ A ++Q+M +
Sbjct: 194 GIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKP 253
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTW--------NSIISVLIRNGLVKEAHSYL 261
+ + G+V++ ++ +++ E++ N+++ + ++ G ++
Sbjct: 254 DEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLF 313
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
+ + SWT +IVGY + G + A K+F M ++V WN MI + +L E L+
Sbjct: 314 DNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALE 373
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F +M+ S PD T L+ CS L LD G H K + + A+I MYA
Sbjct: 374 LFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYA 433
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CGN+ AL F+ +P + ++W +II GLA +G A+ F +M + PD+ITF+G
Sbjct: 434 KCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLG 493
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
VL+AC + GLV++GR YFD MK+++ L P+ HY+C+V+LLGR GL++EA L I+
Sbjct: 494 VLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEEL---IKTM 550
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
+E VWGAL AC IH N+ +GE A ++++L+P++SG+Y++L MY G+ E+A+
Sbjct: 551 PMEADAMVWGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYREAGKWEEAQ 610
Query: 562 RIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
I M E GV+K PG S I++N + F+ D SHP+ ++ NL++ I
Sbjct: 611 NIRKMMMERGVEKTPGSSSIEVNGIINEFIVRDKSHPQSEQIYECFNLINKTI 663
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 212/501 (42%), Gaps = 78/501 (15%)
Query: 6 IQEAQNL------FDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------- 50
I E++NL + + + +WN +IRG ++ + L+ +M R
Sbjct: 97 ISESRNLDYCIKILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYT 156
Query: 51 -------------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
DM+ YN +I L+ A +VFD
Sbjct: 157 YSFLFKVCANLVLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGC 216
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAES 135
VRD+V+WNS+I+GYV EA+ ++ M + D V+ V+ A + + L
Sbjct: 217 VRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGRE 276
Query: 136 YFKEMGARDVASWTIMVNGL----VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
+ + + +VN L V+ G + + LFD M K V +W MI GY NG
Sbjct: 277 IHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGL 336
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISV 247
+ +A LF M ++++ +W +I V + A+ F++M + K T +S
Sbjct: 337 LDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSA 396
Query: 248 LIRNGLVKEA---HSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+ G + H+Y++K+ S ++A T +I Y + G + A++VF M R+ W
Sbjct: 397 CSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTW 456
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
+I GL + + +F +M +SG PD TF VLT C ++ GR+ Q
Sbjct: 457 TAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQ--- 513
Query: 364 IARNQFTTVS-----NAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYA 417
+++F + M+ + R G ++ A ++P+ D + W ++ H
Sbjct: 514 -MKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIH--- 569
Query: 418 EKALELFERM--RLTDFKPDD 436
+ L + ER +L D P D
Sbjct: 570 -RNLLIGERAASKLLDLDPHD 589
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 22/232 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N + A LF MP+++ V WN MI + A+ LF +M +M +
Sbjct: 333 KNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLH 392
Query: 62 LMQSDNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+ + + GA + GM DV ++I Y G + +AL+VF+ MP
Sbjct: 393 CLSACSQLGALDT--GMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPR 450
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEM----GARDVASWTIMVNGLVREGRIVEARKL 167
++ ++W +IG L ++ A YF +M D ++ ++ G + E RK
Sbjct: 451 RNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKY 510
Query: 168 FDKMPAK-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMH-DRDLTSWKQL 213
FD+M ++ + ++ M+ G + AE+L + M + D W L
Sbjct: 511 FDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGAL 562
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 259/482 (53%), Gaps = 28/482 (5%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLI 214
G + AR+LFD +P V +WN+M GY C + L+ +M +R D ++ L
Sbjct: 62 GDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLF 121
Query: 215 NGLVNSRRI----DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
G S + + K ++ N++I++ GL+ A + S++
Sbjct: 122 KGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVV 181
Query: 271 -----------------SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
SWT ++ G+ G+V +A K F M RD W MI G
Sbjct: 182 TWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRL 241
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
+ +E L F +M+ S PD T SVLT C+ L L+LG I K T V
Sbjct: 242 NCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVG 301
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
NA+I MY +CGN++ AL F+++P D +W +++ GLA +G E+AL +F +M
Sbjct: 302 NALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVT 361
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
PD++T+VGVLSAC++ G+VD+G+ +F M ++ ++P AHY C+VDLLG+ G + EA
Sbjct: 362 PDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHE 421
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
++ + ++ + VWGALLGACRIH + ++ E A E+++ELEPNN VY++ +Y +
Sbjct: 422 IIKNM---PMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAA 478
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
C + + + + M + G+KK PGCS I++N H F++GD SHP+ + LN + ++
Sbjct: 479 CNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSD 538
Query: 614 IE 615
++
Sbjct: 539 LK 540
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 199/445 (44%), Gaps = 63/445 (14%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGLMQ 64
A+ LFD +P+ +WN+M +GY + + L+ +M ER D +TY + G +
Sbjct: 67 ARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTR 126
Query: 65 SDNVQGAKE-----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
S +Q +E V G++ +V N++I+ Y GLID A +F DVV+WN
Sbjct: 127 SVALQLGRELHCHVVKYGLD-SNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNA 185
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
+I + +DV SWT +V G V G++ ARK F KMP +D +W
Sbjct: 186 MISGYNRIK--------------KDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSW 231
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
MI GYL C A LF++M + P+ E
Sbjct: 232 TAMIDGYLRLNCYKEALMLFREMQTSKIK-------------------------PD--EF 264
Query: 240 TWNSIISVLIRNGLVKEAH---SYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELM 295
T S+++ + G ++ +Y++K N N ++ YF+ G V A+ +F +
Sbjct: 265 TMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTL 324
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
RD W M+ GL N GEE L F QM ++ +PD T+ VL+ C+ +D G+
Sbjct: 325 PQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGK 384
Query: 356 QIHAQAIKIARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGL 411
+ A AR+ M+ + + G+++ A ++P+ + I W +++
Sbjct: 385 KFFASM--TARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGAC 442
Query: 412 AYHGYAEKALELFERMRLTDFKPDD 436
H AE A E ++ + +P++
Sbjct: 443 RIHKDAEMAERAIE--QILELEPNN 465
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 54/238 (22%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-------------- 48
++ A+ F KMP+RD V+W MI GY + A+ LF +M
Sbjct: 210 TGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSV 269
Query: 49 -------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDV 83
+ D F N +I + NV+ A +F+ + RD
Sbjct: 270 LTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDK 329
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLK-----DVVSWNLVIGALVNCQRMDLAESYFK 138
TW +M+ G NG +EAL +F M LK D V++ V+ A + +D + +F
Sbjct: 330 FTWTAMVVGLAINGCGEEALNMFSQM-LKASVTPDEVTYVGVLSACTHTGMVDEGKKFFA 388
Query: 139 EMGAR-----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
M AR ++A + MV+ L + G + EA ++ MP K N ++ G L C
Sbjct: 389 SMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKP----NSIVWGALLGAC 442
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 297/584 (50%), Gaps = 41/584 (7%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEAL---RVFH 107
D+F N +I + ++ A+ +FD +E +DVV+W++MI Y +GL+DEAL R H
Sbjct: 158 DVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMH 217
Query: 108 GMPLKD----VVSWNLVIGALVNCQRMDLAESYF---KEMGARDVASWTIMVNGLVREGR 160
M +K ++S V+ L + + +Y + G V T +++ V+
Sbjct: 218 VMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCEN 277
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ AR++FD + + +W MIA Y+ + LF KM + + + LV
Sbjct: 278 LAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKE 337
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
A+ K + + +RNG ++ T I Y
Sbjct: 338 CGTAGALELGKLLH-----------AFTLRNGFTL------------SLVLATAFIDMYG 374
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G+V SA VF+ ++D+ +W+ MI +N+ +E FV M G P+ T S
Sbjct: 375 KCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVS 434
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
+L IC+ +L++G+ IH+ K + + + MYA CG+I +A F+ D
Sbjct: 435 LLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRD 494
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
I WN++I G A HG+ E ALELFE M P+DITF+G L ACS++GL+ +G+ F
Sbjct: 495 ISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFH 554
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
M +++ P+ HY C+VDLLGR GL+DEA L I++ + + V+G+ L AC++H
Sbjct: 555 KMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHEL---IKSMPMRPNIAVFGSFLAACKLH 611
Query: 521 NNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSW 580
NIK+GE A ++ + LEP+ SG ++++ +Y S R D I MK+ G+ KEPG S
Sbjct: 612 KNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSS 671
Query: 581 IQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILFDAYY 624
I++N H F+ GD HP ++ +++ + RE L DA Y
Sbjct: 672 IEVNGLLHEFIMGDREHPDAKKVYEMIDEM-----REKLEDAGY 710
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 193/462 (41%), Gaps = 84/462 (18%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PERDMFTYNTVIAG 61
A+ LFDK+ +D V+W+ MIR Y ++G LD A+ L M E M + V+A
Sbjct: 178 ARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAE 237
Query: 62 L----------------------------------MQSDNVQGAKEVFDGMEVRDVVTWN 87
L ++ +N+ A+ VFDG+ +++W
Sbjct: 238 LADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWT 297
Query: 88 SMISGYV-CNGLIDEALRVF-----HGMPLKDVVSWNLV--IGALVNCQRMDLAESYFKE 139
+MI+ Y+ CN L +E +R+F GM ++ +LV G + L ++
Sbjct: 298 AMIAAYIHCNNL-NEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLR 356
Query: 140 MG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
G + T ++ + G + AR +FD +KD+ W+ MI+ Y N C+ A D+
Sbjct: 357 NGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDI 416
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG---LVK 255
F M + E+T S++ + + G + K
Sbjct: 417 FVHMTGCGI---------------------------RPNERTMVSLLMICAKAGSLEMGK 449
Query: 256 EAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
HSY++K ++ T+ + Y G++ +A ++F T RD+++WN MI G +
Sbjct: 450 WIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHG 509
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI-HAQAIKIARNQFTTVS 373
GE L+ F +M+ G +P++ TF L CS L G+++ H +
Sbjct: 510 HGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHY 569
Query: 374 NAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYH 414
M+ + R G + A S+P+ +I + S + H
Sbjct: 570 GCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLH 611
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 72/146 (49%)
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+ + + + +I +N+ + K + M+ + DN SVL C +P+ LG++
Sbjct: 86 SSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQE 145
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
+H +K + V NA+I MY+ G++ A L F + D++SW+++I G
Sbjct: 146 VHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGL 205
Query: 417 AEKALELFERMRLTDFKPDDITFVGV 442
++AL+L M + KP +I + +
Sbjct: 206 LDEALDLLRDMHVMRVKPSEIGMISI 231
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 82/217 (37%), Gaps = 48/217 (22%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-------ER-------- 50
++ A+++FD +D + W+ MI Y +N +D A +F M ER
Sbjct: 379 VRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMI 438
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
DM + + ++ A +F RD+ W
Sbjct: 439 CAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMW 498
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQRMDLAE-------SYFK 138
N+MISG+ +G + AL +F M V ++ IGAL C L +
Sbjct: 499 NAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVH 558
Query: 139 EMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
E G V + MV+ L R G + EA +L MP +
Sbjct: 559 EFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMR 595
>gi|224120036|ref|XP_002318226.1| predicted protein [Populus trichocarpa]
gi|222858899|gb|EEE96446.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 173/502 (34%), Positives = 262/502 (52%), Gaps = 24/502 (4%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
++V WN+MI GY NG E +R+F MP + + N ++N E + G
Sbjct: 18 EIVIWNAMIRGYAFNGPFQECIRMFDEMPQRGLKPHNFTYPYVIN----SCCELEWYGRG 73
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFD---KMPAK-DVQAWNLMIAGYLDNGCVGVAED 197
R I+ +G E A LF+ KMPA DV G N + A
Sbjct: 74 KR--VHCEIVKSGF--ESSYAVANSLFNMYLKMPASFDV--------GLASNCKLDYARK 121
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
+F M R + W Q+I VN + +A F MPE +WNS+I + G V A
Sbjct: 122 IFDDMCVRPVELWNQMIGKYVNIGDVKSARELFDIMPERDIVSWNSMILGYAKGGKVANA 181
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
EK P N+ SWT++I Y + ++ +A FE M R+V WN MI ++
Sbjct: 182 RGLFEKMPEKNVISWTSMIGAYADTDDLETARSFFETMPQRNVVSWNSMISSYAKHGKFV 241
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E L FVQM+ G +PD TF SVL+ CS+L L+ G+ IH + +++++ V A+
Sbjct: 242 ESLNLFVQMQSEGVTPDGYTFVSVLSACSNLGDLEFGKYIHYLSGDLSQSE-VMVGTALT 300
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
MYA+CG++ A F + D+ WN II LA HG +E+A+++F MR T KP+D
Sbjct: 301 EMYAQCGDVDKAFAVFIKIGKRDVFCWNVIIKALALHGRSEEAIKIFLLMRKTGLKPNDF 360
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
TF L ACS+ GLV++G F+ M+ Y + P+ HY C++D+L R G ++EAM L+ +
Sbjct: 361 TFTSALFACSHGGLVEEGHIIFNSMEKDYKIIPKITHYGCLIDMLCRNGQLEEAMLLVED 420
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
+ + +WGALLG CR+ ++K+ E E+ E+E N SGVY++L+ ++ S G+
Sbjct: 421 MP---FQPDVAIWGALLGGCRVTGDLKLAEKVVEKATEMETNESGVYVLLSNIHASAGQW 477
Query: 558 EDAKRIFAQMKENGVKKEPGCS 579
+A +M E + K+ G S
Sbjct: 478 IEAADARKKMDEKKISKKTGSS 499
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 199/444 (44%), Gaps = 33/444 (7%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLMQSDNVQGAKEVF 75
+ V WN MIRGY NG + +F++MP+R + FTY VI + + K V
Sbjct: 18 EIVIWNAMIRGYAFNGPFQECIRMFDEMPQRGLKPHNFTYPYVINSCCELEWYGRGKRVH 77
Query: 76 -----DGMEVRDVVTWNSMIS-----------GYVCNGLIDEALRVFHGMPLKDVVSWNL 119
G E V NS+ + G N +D A ++F M ++ V WN
Sbjct: 78 CEIVKSGFESSYAVA-NSLFNMYLKMPASFDVGLASNCKLDYARKIFDDMCVRPVELWNQ 136
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
+IG VN + A F M RD+ SW M+ G + G++ AR LF+KMP K+V +W
Sbjct: 137 MIGKYVNIGDVKSARELFDIMPERDIVSWNSMILGYAKGGKVANARGLFEKMPEKNVISW 196
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETCE 238
MI Y D + A F+ M R++ SW +I+ + +++ F QM E
Sbjct: 197 TSMIGAYADTDDLETARSFFETMPQRNVVSWNSMISSYAKHGKFVESLNLFVQMQSEGVT 256
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEMGEVGSAIKVF 292
+ +SVL + + + S S + V+VG Y + G+V A VF
Sbjct: 257 PDGYTFVSVLSACSNLGDLEFGKYIHYLSGDLSQSEVMVGTALTEMYAQCGDVDKAFAVF 316
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ RDV WNV+I L + EE +K F+ M+++G P++ TFTS L CS ++
Sbjct: 317 IKIGKRDVFCWNVIIKALALHGRSEEAIKIFLLMRKTGLKPNDFTFTSALFACSHGGLVE 376
Query: 353 LGRQIHAQAIKIAR-NQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICG 410
G I K + T +I M R G ++ A+L +P D+ W +++ G
Sbjct: 377 EGHIIFNSMEKDYKIIPKITHYGCLIDMLCRNGQLEEAMLLVEDMPFQPDVAIWGALLGG 436
Query: 411 LAYHG---YAEKALELFERMRLTD 431
G AEK +E M +
Sbjct: 437 CRVTGDLKLAEKVVEKATEMETNE 460
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 154/310 (49%), Gaps = 21/310 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ A+ LFD MP+RD V+WN MI GY K G + NA LF +MPE+++ ++ ++I +
Sbjct: 147 VKSARELFDIMPERDIVSWNSMILGYAKGGKVANARGLFEKMPEKNVISWTSMIGAYADT 206
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGAL 124
D+++ A+ F+ M R+VV+WNSMIS Y +G E+L +F M + V + L
Sbjct: 207 DDLETARSFFETMPQRNVVSWNSMISSYAKHGKFVESLNLFVQMQSEGVTPDGYTFVSVL 266
Query: 125 VNCQRM-DLAESYFKEMGARDVASWTIMVNGLVRE-----GRIVEARKLFDKMPAKDVQA 178
C + DL + + D++ +MV + E G + +A +F K+ +DV
Sbjct: 267 SACSNLGDLEFGKYIHYLSGDLSQSEVMVGTALTEMYAQCGDVDKAFAVFIKIGKRDVFC 326
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHD-----RDLTSWKQLI----NGLVNSRRI--DAAI 227
WN++I +G A +F M D T L GLV I ++
Sbjct: 327 WNVIIKALALHGRSEEAIKIFLLMRKTGLKPNDFTFTSALFACSHGGLVEEGHIIFNSME 386
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVG 286
+K +P+ + +I +L RNG ++EA +E P+ ++A W ++ G G++
Sbjct: 387 KDYKIIPKITH--YGCLIDMLCRNGQLEEAMLLVEDMPFQPDVAIWGALLGGCRVTGDLK 444
Query: 287 SAIKVFELMT 296
A KV E T
Sbjct: 445 LAEKVVEKAT 454
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 169/374 (45%), Gaps = 62/374 (16%)
Query: 11 NLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQG 70
N++ KMP V G N LD A +F+ M R + +N +I + +V+
Sbjct: 97 NMYLKMPASFDV-------GLASNCKLDYARKIFDDMCVRPVELWNQMIGKYVNIGDVKS 149
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
A+E+FD M RD+V+WNSMI GY G + A +F MP K+V+SW +IGA + +
Sbjct: 150 ARELFDIMPERDIVSWNSMILGYAKGGKVANARGLFEKMPEKNVISWTSMIGAYADTDDL 209
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK---------------- 174
+ A S+F+ M R+V SW M++ + G+ VE+ LF +M ++
Sbjct: 210 ETARSFFETMPQRNVVSWNSMISSYAKHGKFVESLNLFVQMQSEGVTPDGYTFVSVLSAC 269
Query: 175 -----------------DVQAWNLMIAG-----YLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
D+ +M+ Y G V A +F K+ RD+ W
Sbjct: 270 SNLGDLEFGKYIHYLSGDLSQSEVMVGTALTEMYAQCGDVDKAFAVFIKIGKRDVFCWNV 329
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAH---SYLEKYP 265
+I L R + AI F M +T K T+ S + GLV+E H + +EK
Sbjct: 330 IIKALALHGRSEEAIKIFLLMRKTGLKPNDFTFTSALFACSHGGLVEEGHIIFNSMEK-D 388
Query: 266 YSNIASWTN---VIVGYFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGL---GENDLGEE 318
Y I T+ +I G++ A+ + E M + DV +W ++ G G+ L E+
Sbjct: 389 YKIIPKITHYGCLIDMLCRNGQLEEAMLLVEDMPFQPDVAIWGALLGGCRVTGDLKLAEK 448
Query: 319 GLKFFVQMK--ESG 330
++ +M+ ESG
Sbjct: 449 VVEKATEMETNESG 462
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 136/319 (42%), Gaps = 51/319 (15%)
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
++ ++ +WN MI G N +E ++ F +M + G P N T+ V+ C +L G+
Sbjct: 15 SSAEIVIWNAMIRGYAFNGPFQECIRMFDEMPQRGLKPHNFTYPYVINSCCELEWYGRGK 74
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYAR--------------------------------- 382
++H + +K V+N++ MY +
Sbjct: 75 RVHCEIVKSGFESSYAVANSLFNMYLKMPASFDVGLASNCKLDYARKIFDDMCVRPVELW 134
Query: 383 ---------CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
G+++SA F +P DI+SWNS+I G A G A LFE+M +
Sbjct: 135 NQMIGKYVNIGDVKSARELFDIMPERDIVSWNSMILGYAKGGKVANARGLFEKMP----E 190
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
+ I++ ++ A + ++ R +F+ M Q + ++ + G E++N
Sbjct: 191 KNVISWTSMIGAYADTDDLETARSFFETMP-----QRNVVSWNSMISSYAKHGKFVESLN 245
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
L +++++G+ + ++L AC +++ G+ +L + V LTEMY
Sbjct: 246 LFVQMQSEGVTPDGYTFVSVLSACSNLGDLEFGKYIHYLSGDLSQSEVMVGTALTEMYAQ 305
Query: 554 CGRREDAKRIFAQMKENGV 572
CG + A +F ++ + V
Sbjct: 306 CGDVDKAFAVFIKIGKRDV 324
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/453 (36%), Positives = 247/453 (54%), Gaps = 39/453 (8%)
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
M D +WN +I G + G A FQKM RD+ + + ++NS F
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNS---------F 51
Query: 231 KQMPETCEKTWNSIISV---LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGS 287
M K + ISV +I+ G E Y N A +I Y + G++
Sbjct: 52 ASM-----KVMQNAISVHCLIIKTGF--------EAYKLVNNA----LIDMYAKQGKLDC 94
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
AI VF M +DV W ++ G N EE +K F +M+ SG PD SVL+ C++
Sbjct: 95 AIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAE 154
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
L +D G+QIHA +K +V N+++TMYA+CG+I A F ++P D+ISW ++
Sbjct: 155 LTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTAL 214
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
I G A +G + +L+ +++M T KPD ITF+G+L ACS+ GL+ GR YF+ M Y
Sbjct: 215 IVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYG 274
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
++P HY C++DLLGR G + EA LLN++ + VW ALL ACR+H +++GE
Sbjct: 275 IKPGPEHYACMIDLLGRSGKLAEAKGLLNQMV---VAPDAVVWKALLAACRVHKELELGE 331
Query: 528 IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGG 587
+A + + ELEP NS Y++L+ MY + G+ EDA RI M+ G+ KEPG SWI+ N
Sbjct: 332 MAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKEPGYSWIETNSKV 391
Query: 588 HVFLSGDSSHPKFHRLRYLLNLLHTEIEREILF 620
F+S D +HP L N ++++I+ I+
Sbjct: 392 STFMSEDRNHP-------LRNEIYSKIDEIIML 417
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 151/370 (40%), Gaps = 61/370 (16%)
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLA 133
ME D V+WNS+I G V G ++AL F M +D+ + V+ + + + M A
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 134 ESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
S + ++ ++ N L+ ++G++ A +F KM KDV +W ++ GY N
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW-------- 241
G A LF KM + + + ++++ + + +Q+ T K+
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
NS++++ + G + +A+ + P ++ SWT +IVGY
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGY---------------------- 218
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI---- 357
+N G+ L+F+ QM +G PD TF +L CS L GR
Sbjct: 219 ---------AQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAM 269
Query: 358 -HAQAIKIARNQFTTVSNAMITMYARCGNIQSAL-LEFSSVPIHDIISWNSIICGLAYHG 415
IK + MI + R G + A L V D + W +++ H
Sbjct: 270 DKVYGIKPGPEHYA----CMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVH- 324
Query: 416 YAEKALELFE 425
K LEL E
Sbjct: 325 ---KELELGE 331
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 144/342 (42%), Gaps = 73/342 (21%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLMQSDNVQGAKE-- 73
D V+WN +I G + GF ++A+ F +M RDM +T +V+ +Q A
Sbjct: 5 DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64
Query: 74 ---------------------------------VFDGMEVRDVVTWNSMISGYVCNGLID 100
VF M +DVV+W S+++GY NG +
Sbjct: 65 CLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYE 124
Query: 101 EALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV 156
EA+++F M + D ++ V+ A MD + + + S + N LV
Sbjct: 125 EAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLV 184
Query: 157 ----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM----HDRDLT 208
+ G IV+A + FD MP +DV +W +I GY NG + + +M D
Sbjct: 185 TMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYI 244
Query: 209 SWKQLI-----NGLVNSRRIDAAISYFKQMPETC-----EKTWNSIISVLIRNGLVKEAH 258
++ L+ NGL+ S R +YF+ M + + + +I +L R+G + EA
Sbjct: 245 TFIGLLFACSHNGLLGSGR-----AYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAK 299
Query: 259 SYLEKYPYS-NIASWTNVIVGY-----FEMGEVGSAIKVFEL 294
L + + + W ++ E+GE+ +A +FEL
Sbjct: 300 GLLNQMVVAPDAVVWKALLAACRVHKELELGEM-AAKNLFEL 340
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 93/236 (39%), Gaps = 55/236 (23%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------- 48
+ ++ A +F KM +D V+W ++ GY NG + A+ LF +M
Sbjct: 88 KQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVAS 147
Query: 49 --------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
E + N+++ + ++ A FD M RD
Sbjct: 148 VLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRD 207
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDL---AES 135
V++W ++I GY NG +L+ + M D +++ IG L C L +
Sbjct: 208 VISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITF---IGLLFACSHNGLLGSGRA 264
Query: 136 YFKEMG-----ARDVASWTIMVNGLVREGRIVEARKLFDKM-PAKDVQAWNLMIAG 185
YF+ M + M++ L R G++ EA+ L ++M A D W ++A
Sbjct: 265 YFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAA 320
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 64/147 (43%), Gaps = 14/147 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
I +A FD MP RD ++W +I GY +NG +++ ++QM + D T+ ++
Sbjct: 193 IVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFA 252
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPL-KD 113
+ + + F+ M+ V Y C +G + EA + + M + D
Sbjct: 253 CSHNGLLGSGRAYFEAMD--KVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPD 310
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM 140
V W ++ A + ++L E K +
Sbjct: 311 AVVWKALLAACRVHKELELGEMAAKNL 337
>gi|359474320|ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
Length = 580
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 251/436 (57%), Gaps = 6/436 (1%)
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
T +V+ + G + ARK+FD+M ++V +WN M+AGYL +G + VA+ +F ++ +D+
Sbjct: 147 TALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVI 206
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
SW +I+G + ++ A S F+QMPE +WN++IS + G + A S+ + P N
Sbjct: 207 SWNSMISGYARAGDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKN 266
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
SW +I GY + G+V SA ++F+ + +D+ ++N MI +N E L F M
Sbjct: 267 NVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLN 326
Query: 329 S--GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
PD T SV++ CS L L G I + ++ ++ A++ +YA+CG+I
Sbjct: 327 PYVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSI 386
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
A F + D++++ ++I G +G A A++LF+ M P+ ITF+G+L+A
Sbjct: 387 DKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAY 446
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
++AGLV++G F MK KY L P HY +VDL GR G + EA+ L I++ ++
Sbjct: 447 NHAGLVEEGYRCFTSMK-KYNLVPSVDHYGIMVDLFGRAGRLQEALEL---IKSMPMQPH 502
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
VWGALL ACR+HNN++ GEIA + ELEP+ +G +L+ +Y S R +D KR+
Sbjct: 503 AGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYRSLLSNIYASGERWDDVKRLRKV 562
Query: 567 MKENGVKKEPGCSWIQ 582
KE G K PGCSW++
Sbjct: 563 TKEKGFSKIPGCSWME 578
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 183/389 (47%), Gaps = 21/389 (5%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
A+++FD M R+VV+WNSM++GY+ +G + A RVF +P KDV+SWN +I M
Sbjct: 162 ARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDM 221
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
+ A S F++M R+ ASW M++G V G I AR FD MP K+ +W MI+GY G
Sbjct: 222 EKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCG 281
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSI 244
V A +LF ++ +DL + +I + R + A++ F M + E T S+
Sbjct: 282 DVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASV 341
Query: 245 ISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDV 300
IS + G ++ SY+ + ++ Y + G + A ++F + +D+
Sbjct: 342 ISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDL 401
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
+ MI G G N + +K F +M ++ P++ TF +LT + ++ G +
Sbjct: 402 VAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTS 461
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAE- 418
K M+ ++ R G +Q AL S+P+ W +++ H E
Sbjct: 462 MKKYNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEF 521
Query: 419 ---KALELFERMRLTDFKPDDITFVGVLS 444
A FE +PD + +LS
Sbjct: 522 GEIAAQHCFE------LEPDTTGYRSLLS 544
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 165/336 (49%), Gaps = 33/336 (9%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ +FD+M +R+ V+WN M+ GY K+G L A +F+++P++D+ ++N++I+G ++ ++
Sbjct: 162 ARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDM 221
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQ 128
+ A +F M R+ +WN+MISG+V G ID A F MP K+ VSW +I C
Sbjct: 222 EKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCG 281
Query: 129 RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM--PAKDVQAWNLMIAGY 186
+D A F ++G +D+ + M+ + R EA LF+ M P +VQ + +A
Sbjct: 282 DVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASV 341
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWNSII 245
+ + C ++ D W + SY +++ E +++
Sbjct: 342 I-SAC--------SQLGDLRFGPWIE---------------SYMRRLGIEMDGHLATALL 377
Query: 246 SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV 305
+ + G + +A+ ++ ++T +I+G G+ AIK+F+ M + ++
Sbjct: 378 DLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSI 437
Query: 306 MIFGL----GENDLGEEGLKFFVQMKESG--PSPDN 335
GL L EEG + F MK+ PS D+
Sbjct: 438 TFIGLLTAYNHAGLVEEGYRCFTSMKKYNLVPSVDH 473
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 178/372 (47%), Gaps = 41/372 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+++ + AQ +FD++PQ+D ++WN MI GY + G ++ A LF QMPER+ ++N +I+
Sbjct: 185 LKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKASSLFQQMPERNFASWNAMIS 244
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
G ++ ++ A+ FD M ++ V+W +MISGY G +D A +F + KD++ +N +
Sbjct: 245 GHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAM 304
Query: 121 IGALVNCQRMDLAESYFK------------EMGARDVASWTIMVNGLVREGRIVEA--RK 166
I R + A + F EM V S + G +R G +E+ R+
Sbjct: 305 IACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQL-GDLRFGPWIESYMRR 363
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL-VNSRRIDA 225
L +M D ++ Y G + A +LF + +DL ++ +I G +N + ID
Sbjct: 364 LGIEM---DGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAID- 419
Query: 226 AISYFKQMPETC----EKTWNSIISVLIRNGLVKEAH---SYLEKYPYSNIASWTNVIVG 278
AI F +M + T+ +++ GLV+E + + ++KY ++V
Sbjct: 420 AIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYNLVPSVDHYGIMVD 479
Query: 279 YFEMGEVGSAIKVFELMTTRDVT----VWNVMIFG--LGEN-DLGEEGLKFFVQMKESGP 331
F G G + EL+ + + VW ++ L N + GE + +++
Sbjct: 480 LF--GRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELE---- 533
Query: 332 SPDNATFTSVLT 343
PD + S+L+
Sbjct: 534 -PDTTGYRSLLS 544
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 125/343 (36%), Gaps = 67/343 (19%)
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
V + D W I ++ +E +VQM+ G P +S L C+ +
Sbjct: 61 VLHHSKSPDSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARIAY 120
Query: 351 LDLGRQIHAQAIKIARN---QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN-- 405
G IH Q K + V A++ Y + G+++ A F + +++SWN
Sbjct: 121 RMGGISIHGQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSM 180
Query: 406 -----------------------------SIICGLAYHGYAEKALELFERMRLTDFKPDD 436
S+I G A G EKA LF++M +F
Sbjct: 181 LAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKASSLFQQMPERNFA--- 237
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNK---YFLQPRSAHYTC--------VVDLLGRF 485
++ ++S G +D R +FD M K ++ S + C + D +G
Sbjct: 238 -SWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQVGGK 296
Query: 486 GLI---------------DEAMNLLNEIRADGIEVSP--TVWGALLGACRIHNNIKVGEI 528
L+ +EA+NL N + + V P +++ AC +++ G
Sbjct: 297 DLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQLGDLRFGPW 356
Query: 529 AGERVMELEPNNSG-VYLILTEMYLSCGRREDAKRIFAQMKEN 570
+ L G + L ++Y CG + A +F +++
Sbjct: 357 IESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKK 399
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 190/639 (29%), Positives = 322/639 (50%), Gaps = 29/639 (4%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
+++A LFD+M + D WNVMI+G+ G A+ +++M + D FTY VI
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 62 LMQSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ +++ K++ + V DV NS+IS Y+ G +A +VF MP +D+VSW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 118 NLVIGALVNCQRMDLAESYFKEM---GARDVASWTIMVNGLV------REGRIVEARKLF 168
N +I + + FKEM G + T+ G + G+ + +
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
++ DV ++ Y G V AE +F M R++ +W +I + R+ A
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 229 YFKQMPETCEKTWNSIISV-LIRNGLVKEA---HSYLEKYPY-SNIASWTNVIVGYFEMG 283
F++M E + I S+ L+ + E H Y + + ++ T +I Y E G
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECG 379
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
++ SA +F+ M ++V WN +I +N L+ F ++ +S PD+ T S+L
Sbjct: 380 QLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILP 439
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
++ +L GR+IHA +K T + N+++ MYA CG+++ A F+ + + D++S
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS 499
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
WNSII A HG+ ++ LF M + P+ TF +L+ACS +G+VD+G YF+ MK
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK 559
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLGACRIHN 521
+Y + P HY C++DL+GR G A L E + PT +WG+LL A R H
Sbjct: 560 REYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEE-----MPFVPTARIWGSLLNASRNHK 614
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
+I + E A E++ ++E +N+G Y++L MY GR ED RI M+ G+ + S +
Sbjct: 615 DITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTV 674
Query: 582 QINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILF 620
+ HVF +GD SH +++ +L+++ + E ++
Sbjct: 675 EAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIY 713
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 151/339 (44%), Gaps = 39/339 (11%)
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
N + T + G+ + + A+++F+ M D +WNVMI G L E ++F+ +M
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
+G D T+ V+ + + +L+ G++IHA IK+ V N++I++Y + G
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
A F +P DI+SWNS+I G G +L LF+ M FKPD + + L ACS
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 448 YAGLVDQGRYYFDCMKNKYFLQPRSAHY-TCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
+ G+ C + ++ T ++D+ ++G + A + N + I+ +
Sbjct: 243 HVYSPKMGK-EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM----IQRN 297
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVME---LEPNN-SGVYLI---------------- 546
W ++G + + + +++ E L+P+ + + L+
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAM 357
Query: 547 -------------LTEMYLSCGRREDAKRIFAQMKENGV 572
L +MY CG+ + A+ IF +M E V
Sbjct: 358 RRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNV 396
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 183/458 (39%), Gaps = 89/458 (19%)
Query: 158 EGRIVE-ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM----HDRDLTSWKQ 212
+ R++E A +LFD+M D WN+MI G+ G A + +M D ++
Sbjct: 76 DSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPF 135
Query: 213 L------INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
+ I+ L ++I A + + + NS+IS+ ++ G +A E+ P
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGFVSDV--YVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
+I SW ++I GY +G+ G L F +M
Sbjct: 194 RDIVSWNSMISGYLALGD-------------------------------GFSSLMLFKEM 222
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT----VSNAMITMYAR 382
+ G PD + S L CS + + +G++IH A+ R++ T V +++ MY++
Sbjct: 223 LKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAV---RSRIETGDVMVMTSILDMYSK 279
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD-FKPDDITFVG 441
G + A F+ + +I++WN +I A +G A F++M + +PD IT +
Sbjct: 280 YGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSIN 339
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID------------ 489
+L A + + +GR + FL P T ++D+ G G +
Sbjct: 340 LLPASA----ILEGRTIHGYAMRRGFL-PHMVLETALIDMYGECGQLKSAEVIFDRMAEK 394
Query: 490 -------------------EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIA 529
A+ L E+ + T ++L A ++ G EI
Sbjct: 395 NVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIH 454
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
V +N+ + L MY CG EDA++ F +
Sbjct: 455 AYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI 492
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 72/130 (55%), Gaps = 12/130 (9%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+++ A+ +FD+M +++ ++WN +I Y +NG +A+ LF ++ + + +T IA ++
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 64 QSDNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+ + + +G E+ + + NS++ Y G +++A + F+ + LKD
Sbjct: 439 PA--YAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKD 496
Query: 114 VVSWNLVIGA 123
VVSWN +I A
Sbjct: 497 VVSWNSIIMA 506
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 191/692 (27%), Positives = 330/692 (47%), Gaps = 100/692 (14%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNT--- 57
++ +++E + LF++MP RD V WN+M++ Y + GF + A+ L + +
Sbjct: 191 LKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLR 250
Query: 58 VIAGLMQSDNVQGAKEVF----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
++A + D+ G + F D V +++ N +S Y+ +G L+ F M D
Sbjct: 251 LLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESD 310
Query: 114 V----VSW-----------NLVIGALVNCQRMDL------------------------AE 134
V V++ +L +G V+C + L A
Sbjct: 311 VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFAR 370
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLF----------------------DKMP 172
+ F M RD+ SW ++ G+ + G VEA LF +P
Sbjct: 371 TVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP 430
Query: 173 -----AKDVQAWNL-------------MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLI 214
+K V + +I Y N C+ AE LF++ H+ DL +W ++
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMM 489
Query: 215 NGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN-GLV------KEAHSYLEKYPYS 267
G S + F M + E++ + ++ + + G + K+ H+Y K Y
Sbjct: 490 AGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY- 548
Query: 268 NIASW--TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
++ W + ++ Y + G++ +A F+ + D W MI G EN E F Q
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ G PD T ++ S L L+ GRQIHA A+K+ V +++ MYA+CG+
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
I A F + + +I +WN+++ GLA HG ++ L+LF++M+ KPD +TF+GVLSA
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
CS++GLV + + M Y ++P HY+C+ D LGR GL+ +A NL+ + +E
Sbjct: 729 CSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM---SMEA 785
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
S +++ LL ACR+ + + G+ +++ELEP +S Y++L+ MY + + ++ K
Sbjct: 786 SASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLART 845
Query: 566 QMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
MK + VKK+PG SWI++ + H+F+ D S+
Sbjct: 846 MMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSN 877
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 149/605 (24%), Positives = 246/605 (40%), Gaps = 105/605 (17%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGF-----LDNAMCLFNQMPERDMFTYNTVIAGLM 63
A+ +FDKMP RD V+WN ++ Y ++ + A LF + + ++T ++ ++
Sbjct: 93 ARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPML 152
Query: 64 QSDNVQG---AKEVFDGMEVRDVVTWNSMISGYVCN-----GLIDEALRVFHGMPLKDVV 115
+ G A E F G + + + ++G + N G + E +F MP +DVV
Sbjct: 153 KLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVV 212
Query: 116 SWNLVIGALVNC----QRMDLAESYFK------EMGAR----------DVASWTIMVNG- 154
WNL++ A + + +DL+ ++ E+ R D NG
Sbjct: 213 LWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGN 272
Query: 155 -----------------LVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+ G+ K F M DV+ + L +
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 198 LFQKMH--------DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI 249
L Q++H D LT LIN R+ A + F M E +WNS+I+ +
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 250 RNGL--------------------------VKEAHSYLEKYPYS----------NIASWT 273
+NGL +K A S E S N S +
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTR---DVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
V + +K E++ R D+ WN M+ G ++ G + LK F M + G
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
D+ T +V C L ++ G+Q+HA AIK + VS+ ++ MY +CG++ +A
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
F S+P+ D ++W ++I G +G E+A +F +MRL PD+ T + A S
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 451 LVDQGR-YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
++QGR + + +K P T +VD+ + G ID+A L I I T
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNI----TA 686
Query: 510 WGALL 514
W A+L
Sbjct: 687 WNAML 691
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 165/650 (25%), Positives = 269/650 (41%), Gaps = 131/650 (20%)
Query: 13 FDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS-----DN 67
F++ P+R + N +I Y K G L A +F++MP+RD+ ++N+++A QS +N
Sbjct: 68 FEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVEN 125
Query: 68 VQGAKEVFDGMEVRDVVTWNSMI----------SGYVCNGLIDEALRVFHGMPLKDVVSW 117
+Q A +F + +DVV + M SGYV A FHG K +
Sbjct: 126 IQQAFLLFRILR-QDVVYTSRMTLSPMLKLCLHSGYVW------ASESFHGYACKIGLDG 178
Query: 118 N-LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
+ V GALVN Y K G V+EG++ LF++MP +DV
Sbjct: 179 DEFVAGALVNI--------YLK--------------FGKVKEGKV-----LFEEMPYRDV 211
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMH--------------------DRDLTSWKQLING 216
WNLM+ YL+ G A DL H D D K NG
Sbjct: 212 VLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANG 271
Query: 217 ------------------LVNSRRIDAAISYFKQMPET---CEK-TWNSIISVLIRN--- 251
++S + A + F M E+ C++ T+ +++ ++
Sbjct: 272 NDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSL 331
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
L ++ H K + + +N ++ Y ++ + G A VF+ M+ RD+ WN +I G+
Sbjct: 332 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGI 391
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT-LDLGRQIHAQAIKIARNQF 369
+N L E + F+Q+ G PD T TSVL S LP L L +Q+H AIKI
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
+ VS A+I Y+R ++ A + F D+++WN+++ G K L+LF M
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGR-----------------------YYFDC--MKN 464
+ DD T V C + ++QG+ Y C M
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 465 KYFL-----QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
F P +T ++ G + A ++ +++R G+ L A
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 520 HNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
++ G ++L N+ V L +MY CG +DA +F +++
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIE 680
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
L LG+ HA+ + N + N +I+MY++CG++ A F +P D++SWNSI+
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 411 LAYHGYA-----EKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
A ++A LF +R +T +L C ++G V
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
>gi|222632692|gb|EEE64824.1| hypothetical protein OsJ_19680 [Oryza sativa Japonica Group]
Length = 688
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 201/644 (31%), Positives = 310/644 (48%), Gaps = 51/644 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM--PERDMFTYNTVI 59
R++R+ +A LFD MP+RD V + ++ G+ G AM LF+++ + + +
Sbjct: 37 RSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRLRASSPPLAPADPFV 96
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
L+ A F + + ++ +G C GL AL+VF MP K+VVSW
Sbjct: 97 LSLVFKSCAAAADARF----LPHAASLHAFAAG--CLGL---ALKVFDEMPHKNVVSWTT 147
Query: 120 VIGALVNCQRMDLAESYFKEMGARDV---------ASWTIMVNGLVREGRIVEA--RKL- 167
++ +L R A F EM A V A GL+ GR V A KL
Sbjct: 148 LVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAGLLSRGREVHAFCAKLG 207
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
D P N + Y V A +M RD+ +W +I+ V + R AI
Sbjct: 208 LDSTP----YVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVISAYVQTGRAKEAI 263
Query: 228 SYFKQM--------PETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVI 276
F +M E T+ ++I+ V ++ H+ + ++ S N +
Sbjct: 264 EAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACARSVANSL 323
Query: 277 VGYF--EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE-SG-PS 332
V + G + +A VF +DV W+ +I G + L E+ F +M+ SG P
Sbjct: 324 VTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHHSGCPR 383
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P+ T S+L++C+ +LD GRQ+H A+ + +A+I MY + G++ A +
Sbjct: 384 PNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLDADIV 443
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
FS D++SW ++I G A HG+++KALELF+ M KPD +TF+GVL+AC +AG V
Sbjct: 444 FSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNACCHAGEV 503
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+ G Y + M Y L P HY CVVDLLGR G I+EA L+ +I A+ E VW +
Sbjct: 504 ELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIGKIAAN--ERDGVVWTS 561
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LL AC + G+ A ER ME EP +G ++ + +Y S G+ +A + MK+ GV
Sbjct: 562 LLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMANLYASKGQWHEAAQERHMMKQKGV 621
Query: 573 KKEPGCSWIQINDGGH-----VFLSGDSSHPKFHRLRYLLNLLH 611
K G W I GG VF++ D +HP+ + +L L++
Sbjct: 622 VK--GAGWSSITVGGEGRRVGVFVASDRTHPQDSAIYRMLELIY 663
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 294/552 (53%), Gaps = 61/552 (11%)
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESY 136
R+V +N++I+G+V NGL + + + M + D ++ V+ A C+ M++ + +
Sbjct: 40 RNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGVMPDKFTFPCVVRAC--CEFMEVRKIH 97
Query: 137 ---FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
FK +V + +VN ++ +A K+F+++P
Sbjct: 98 GCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELP--------------------- 136
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET----CEKTWNSIISVLI 249
+RD+ W +ING ++ A+ FK+M E T SI+S+L
Sbjct: 137 ----------ERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILT 186
Query: 250 RNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNV 305
G + + H + K YS+ + +N ++ Y + A+ +FE++ +D+ WN
Sbjct: 187 SMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNS 246
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI--K 363
+I + D + L+ F +M S PD T T+VL CS L L GR+IH I
Sbjct: 247 IISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNG 306
Query: 364 IARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
+ +N+ ++NA++ MYA+CG +++A + F + D+ SWN +I G A HGY +A
Sbjct: 307 LGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEA 366
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L++F RM KPD +TFVGVLSACS+AG V QGR + M+ ++ + P HYTC++D
Sbjct: 367 LDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIID 426
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
+LGR G + EA +L I +E + +W ALLGACR+H N ++G + GE++ +LEP +
Sbjct: 427 MLGRAGHLGEAYDLAQRIP---LEDNLILWMALLGACRLHGNAELGNVVGEKITQLEPKH 483
Query: 541 --SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
SG Y++++ +Y GR E+A + MKE VKK PGCSWI++ DG +VF GD +H
Sbjct: 484 CGSGSYILMSSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIELKDGLYVFSMGDRTH- 542
Query: 599 KFHRLRYLLNLL 610
H L L+N L
Sbjct: 543 --HELNALINCL 552
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 125/560 (22%), Positives = 230/560 (41%), Gaps = 114/560 (20%)
Query: 2 RNARIQEAQNLF-DKMPQRDTVTWNVMIRGYFKNGFLDNAM------------------- 41
R +++EA +F D +R+ +N +I G+ NG +
Sbjct: 22 RCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGVMPDKFTFP 81
Query: 42 -----------------CLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
CLF E ++F + ++ ++ D + A++VF+ + RDVV
Sbjct: 82 CVVRACCEFMEVRKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELPERDVV 141
Query: 85 TWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNL--VIGALVNCQRMDLAESYF 137
WN+MI+GY G +++A+ VF G+ L + ++ ++ ++ +
Sbjct: 142 LWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIV 201
Query: 138 KEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
+MG + VA +++ + +A +F+ + KD+ +WN +I+ +
Sbjct: 202 TKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAH---------- 251
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
++ D D T +L ++ SR + I+ +P S ++ L+ +E
Sbjct: 252 ---EQCDDHDGT--LRLFGKMLGSRVLPDVITITAVLPAC------SHLAALMHG---RE 297
Query: 257 AHSY-----LEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
H Y L K + N I+ Y + G + +A +F+LM +DV WN+MI G
Sbjct: 298 IHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGY 357
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+ G E L F +M E+ PD TF VL+ CS HA + R+ T
Sbjct: 358 AMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACS-----------HAGFVHQGRSFLT 406
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
+ LEF +P I + II L G+ +A +L +R+ L
Sbjct: 407 RME-----------------LEFGVIPT--IEHYTCIIDMLGRAGHLGEAYDLAQRIPLE 447
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR---SAHYTCVVDLLGRFGL 487
D + I ++ +L AC G + G + + L+P+ S Y + L G G
Sbjct: 448 D---NLILWMALLGACRLHGNAELGNVVGEKITQ---LEPKHCGSGSYILMSSLYGVVGR 501
Query: 488 IDEAMNLLNEIRADGIEVSP 507
+EA+ + ++ ++ +P
Sbjct: 502 YEEALEVRRTMKEQNVKKTP 521
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 177/576 (30%), Positives = 297/576 (51%), Gaps = 20/576 (3%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
E D+F N +I + ++ +VF+GM R+VV+W S+I GY EA+ +F
Sbjct: 163 EEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFE 222
Query: 109 MPLKDV----VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGR 160
M + V+ VI A + +D+ E +G + +MVN LV + G
Sbjct: 223 MVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGA 282
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNG----CVGVAEDLFQKMHDRDLTSWKQLING 216
I A++LFD+ +++ +N +++ Y G + + +++ Q+ D + I+
Sbjct: 283 IDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISA 342
Query: 217 ---LVNSRRIDAAISY-FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW 272
LV+ Y + E + N II + ++ G + A + + SW
Sbjct: 343 SAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSW 402
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
++ G+ G+V SA +VF + R+ WN MI GL + L E+ ++ F +M+ G
Sbjct: 403 NSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIK 462
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
D T + + C L +L + +H K ++ A++ M+ARCG+ QSA+
Sbjct: 463 ADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQV 522
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F+ + D+ +W + I +A G E A LF +M + KPD + FV VL+ACS+ G V
Sbjct: 523 FNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQV 582
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+QG + F M++ + + P+ HY C+VDLLGR GL+ EA +L I++ +E + VWG+
Sbjct: 583 EQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAFDL---IKSMPMEPNDVVWGS 638
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LL ACR+H N+++ A ER+ EL P +GV+++L+ +Y S G+ D R+ ++E GV
Sbjct: 639 LLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGV 698
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
+K PG S +Q+N H F SGD SHP+ + +L
Sbjct: 699 RKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQ 734
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 200/484 (41%), Gaps = 64/484 (13%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-------------- 49
+ +F+ M +R+ V+W +I GY + A+ LF +M E
Sbjct: 180 GHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVI 239
Query: 50 ------RDM-------------------FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
RD+ N ++ M+ + AK +FD R++V
Sbjct: 240 SACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLV 299
Query: 85 TWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGA---LVNCQRMDLAESYF 137
+N+++S Y GL EAL + M P D V+ I A LV+ + Y
Sbjct: 300 LYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYV 359
Query: 138 KEMGARDVASW----TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
G + W ++++ ++ G+ A ++FD M K V +WN + AG++ NG V
Sbjct: 360 IRNG---LEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVE 416
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWNSIISVLIRNG 252
A ++F ++ +R+ W +I+GLV + AI F++M E + +++ + G
Sbjct: 417 SAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACG 476
Query: 253 ------LVKEAHSYLEKYPYSNIASWTNVIVGYF-EMGEVGSAIKVFELMTTRDVTVWNV 305
L K H+Y+EK +V F G+ SA++VF MT RDV+ W
Sbjct: 477 YLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTA 536
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
I + GE F QM G PD F VLT CS ++ G I +
Sbjct: 537 AIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHG 596
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYHGYAEKALEL 423
+ M+ + R G ++ A S+P+ +D++ W S++ H E A
Sbjct: 597 ISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVV-WGSLLAACRVHKNVEMATYA 655
Query: 424 FERM 427
ER+
Sbjct: 656 AERI 659
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 156/386 (40%), Gaps = 54/386 (13%)
Query: 234 PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGS---AI 289
P T + N + +K+ H + K I S T ++ E+ S A
Sbjct: 21 PMTKDSCLNESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYAR 80
Query: 290 KVFELM-----TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
K FEL + + + N +I G LG E + +V+M G +P++ TF VL+
Sbjct: 81 KAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSG 140
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
C+ + G Q+H +K+ + + N +I YA CG++ F + +++SW
Sbjct: 141 CTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSW 200
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS----------------- 447
S+ICG A ++A+ LF M +P +T V V+SAC+
Sbjct: 201 TSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGE 260
Query: 448 ------------------YAGLVDQGRYYFD-CMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
G +D + FD C+ L Y ++ R GL
Sbjct: 261 LGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVL------YNTILSNYARQGLA 314
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYLI 546
EA+ +L+E+ G + + A ++ G++ V+ LE +S + +
Sbjct: 315 REALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDS-IGNV 373
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGV 572
+ +MY+ CG+ E A R+F M V
Sbjct: 374 IIDMYMKCGKPEMACRVFDLMSNKTV 399
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 19/264 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ + + A +FD M + V+WN + G+ +NG +++A +FNQ+PER+ +NT+I+
Sbjct: 379 MKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMIS 438
Query: 61 GLMQSDNVQGAKEVFDGMEVR----DVVTWNSMIS--GYVCNGLIDEALRVF---HGMPL 111
GL+Q + A E+F M+ D VT + S GY+ + + + + +G+P
Sbjct: 439 GLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPC 498
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
D+ ++ C A F +M RDV++WT + + EG A LF++M
Sbjct: 499 -DMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQM 557
Query: 172 PAK----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS----WKQLINGLVNSRRI 223
+ DV + ++ G V +F M D ++ + +++ L + +
Sbjct: 558 LIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLL 617
Query: 224 DAAISYFKQMP-ETCEKTWNSIIS 246
A K MP E + W S+++
Sbjct: 618 REAFDLIKSMPMEPNDVVWGSLLA 641
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 160/446 (35%), Positives = 255/446 (57%), Gaps = 13/446 (2%)
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKT 240
+I Y G +G A +F ++ +DL SW +I+G R A+ F++M E +
Sbjct: 168 LITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPN 227
Query: 241 WNSIISVLIRNGLVKEAH--SYLEKYPYSNIASW-----TNVIVGYFEMGEVGSAIKVFE 293
S++SVL G + + +++E++ N + + +I Y + G++ SA ++F+
Sbjct: 228 EMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFD 287
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
M +D WN MI G +N + EE +K F M+ S +PD T +L+ C+ + LDL
Sbjct: 288 SMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDL 347
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
G+Q+ A + V A++ MYA+CG++ +A F +P + +SWN++I LA+
Sbjct: 348 GKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAF 407
Query: 414 HGYAEKALELFERM--RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
HG A++AL LF+ M P+DITFVGVLSAC +AGLVD+GR F M + + L P+
Sbjct: 408 HGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPK 467
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
HY+C+VDL R G ++EA + + + EV + GALLGAC+ NI + E +
Sbjct: 468 IEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEV---ILGALLGACQKRKNIDISERVMK 524
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
++ELEP+NSG Y+I +++Y + R +D+ R+ MK+ GV K PGCSWI IN H F
Sbjct: 525 LLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFH 584
Query: 592 SGDSSHPKFHRLRYLLNLLHTEIERE 617
+GD H ++ + +L+LL ++ RE
Sbjct: 585 AGDVLHQEWIEIHQILDLLIDDLRRE 610
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 155/303 (51%), Gaps = 14/303 (4%)
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++I Y G++G A KVF+ ++ +D+ WN MI G + E + F +M E+G P
Sbjct: 167 SLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQP 226
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAI--KIARNQFTTVSNAMITMYARCGNIQSALL 391
+ + SVL C +L L LG + + K+ N F + +A+I MY +CG++ SA
Sbjct: 227 NEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYF--MGSALIHMYGKCGDLVSARR 284
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F S+ D ++WN++I G A +G +E+A++LF+ MR++ PD IT +G+LSAC+ G
Sbjct: 285 IFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGA 344
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
+D G+ + ++ Q T +VD+ + G +D A + + EVS W
Sbjct: 345 LDLGK-QVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKN-EVS---WN 399
Query: 512 ALLGACRIHNNIKVGEIAGERVME----LEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
A++ A H + + +M + PN+ +L+ + G ++ +R+F M
Sbjct: 400 AMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSAC-VHAGLVDEGRRLFHMM 458
Query: 568 KEN 570
+
Sbjct: 459 SSS 461
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 139/318 (43%), Gaps = 53/318 (16%)
Query: 303 WNVMIFGLGEN-DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
+NVMI GL + L+F+ +MK G P+N T+ + CS+L ++ GR H
Sbjct: 94 FNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSV 153
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
I+ ++ VS+++ITMYARCG + A F + D++SWNS+I G + +A +A+
Sbjct: 154 IRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAV 213
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-------------------------- 455
LF M F+P++++ V VL AC G + G
Sbjct: 214 GLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMY 273
Query: 456 ---------RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
R FD MK K + ++ + G+ +EA+ L ++R
Sbjct: 274 GKCGDLVSARRIFDSMKKK-----DKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPD 328
Query: 507 PTVWGALLGACRIHNNIKVGE----IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
+L AC + +G+ A ER + ++ V L +MY CG ++A R
Sbjct: 329 QITLIGILSACASIGALDLGKQVEIYASERGFQ---DDVYVGTALVDMYAKCGSLDNAFR 385
Query: 563 IFAQMKENGVKKEPGCSW 580
+F G+ K+ SW
Sbjct: 386 VFY-----GMPKKNEVSW 398
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 152/353 (43%), Gaps = 36/353 (10%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+ D +++I + + A++VFD + +D+V+WNSMISGY EA+ +F
Sbjct: 159 DEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFRE 218
Query: 109 MP----LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT-IMVNGLV----REG 159
M + +S V+GA + L ++ +E + + M + L+ + G
Sbjct: 219 MMEAGFQPNEMSLVSVLGACGELGDLKLG-TWVEEFVVENKMTLNYFMGSALIHMYGKCG 277
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
+V AR++FD M KD WN MI GY NG A LFQ M + + G+++
Sbjct: 278 DLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILS 337
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
+ A+ KQ+ E+ ++ T ++ Y
Sbjct: 338 ACASIGALDLGKQVEIYAS-----------------------ERGFQDDVYVGTALVDMY 374
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP--SPDNAT 337
+ G + +A +VF M ++ WN MI L + +E L F M G SP++ T
Sbjct: 375 AKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDIT 434
Query: 338 FTSVLTICSDLPTLDLGRQI-HAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
F VL+ C +D GR++ H + + M+ +++R G+++ A
Sbjct: 435 FVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEA 487
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 143/322 (44%), Gaps = 58/322 (18%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----------- 50
R ++ +A+ +FD++ Q+D V+WN MI GY K A+ LF +M E
Sbjct: 174 RCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVS 233
Query: 51 ----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
+ F + +I + ++ A+ +FD M+ +D
Sbjct: 234 VLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKD 293
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQR---MDLA---ES 135
VTWN+MI+GY NG+ +EA+++F M + + +IG L C +DL E
Sbjct: 294 KVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEI 353
Query: 136 YFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
Y E G + DV T +V+ + G + A ++F MP K+ +WN MI+ +G
Sbjct: 354 YASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQE 413
Query: 195 AEDLFQKMHDRDLT------SWKQLINGLVNSRRIDAAISYFKQMPETCE-----KTWNS 243
A LF+ M + T ++ +++ V++ +D F M + + ++
Sbjct: 414 ALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSC 473
Query: 244 IISVLIRNGLVKEAHSYLEKYP 265
++ + R G ++EA ++ P
Sbjct: 474 MVDLFSRAGHLEEAWDFVMTMP 495
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 317/638 (49%), Gaps = 55/638 (8%)
Query: 6 IQEAQNLFDKMPQR---DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTV 58
+ +AQ +F+ P + + WN ++R +G+ + A+ ++ +M + D FT+ V
Sbjct: 920 VSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLV 979
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWN-----SMISGYVCNGLIDEALRVFHGMPLKD 113
I + + + V G V WN ++ Y G +D+A +VF M ++
Sbjct: 980 IRACALMGSRKLCRSVH-GHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRS 1038
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKLFD 169
VSWN ++ A F+ MG+ ++ +WT +++ R G+ VE +LF
Sbjct: 1039 CVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFG 1098
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ--LINGLVNSRRIDAAI 227
+M + + A +A L V V DL ++ + +I+G V
Sbjct: 1099 RMRMRGIGATAEALAVVLS---VSV-----------DLAAFDEGKVIHGYV--------- 1135
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGS 287
K E NS+I + ++G V A + NI SW +I Y ++G
Sbjct: 1136 --VKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDE 1193
Query: 288 AIKVFELMTTRD--------VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
A +F + D V W+ +I G GEE L+ F +M+ + ++ T
Sbjct: 1194 AFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIA 1253
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
SVL++C++L L LGR+IH ++ + V N +I MY + G+ + L F +
Sbjct: 1254 SVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENK 1313
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
D+ISWN+++ G HG E A+ F++M F+PD +TFV VLSACS+AGLV +GR F
Sbjct: 1314 DLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELF 1373
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
D M ++ ++P+ HY C+VDLLGR GL+ EA + +++ +E + VWGALL +CR+
Sbjct: 1374 DKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKV---VKSMPVEPNACVWGALLNSCRM 1430
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
H N +V E ++ L +G Y++L+ +Y + GR ED+ ++ K G+KK PG S
Sbjct: 1431 HKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQS 1490
Query: 580 WIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
WIQ+ ++F +G++ H + + +L L ++E E
Sbjct: 1491 WIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVE 1528
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 191/444 (43%), Gaps = 53/444 (11%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
R+ +A+ +F++M R V+WN M+ GY N A +F M AGL
Sbjct: 1023 RMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGS----------AGLEP 1072
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLV 120
++VTW S++S + G E + +F M ++ + + +V
Sbjct: 1073 -----------------NLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVV 1115
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDV 176
+ V+ D + + ++ + N L+ + G + AR LF ++ K++
Sbjct: 1116 LSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNI 1175
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMHDRD--------LTSWKQLINGLVNSRRIDAAIS 228
+WN +I+ Y D G A +F ++ D + SW +I G + + + A+
Sbjct: 1176 VSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALE 1235
Query: 229 YFKQMPETCEK----TWNSIISV---LIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYF 280
F++M K T S++SV L L +E H ++ + NI +I Y
Sbjct: 1236 LFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYT 1295
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G VFE + +D+ WN M+ G G + LGE ++ F QM + G PD TF +
Sbjct: 1296 KSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVA 1355
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA-MITMYARCGNIQSALLEFSSVPIH 399
VL+ CS + GR++ + IK R + A M+ + R G +Q A S+P+
Sbjct: 1356 VLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVE 1415
Query: 400 -DIISWNSIICGLAYHGYAEKALE 422
+ W +++ H E A E
Sbjct: 1416 PNACVWGALLNSCRMHKNTEVAEE 1439
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 127/299 (42%), Gaps = 7/299 (2%)
Query: 275 VIVGYFEMGEVGSAIKVFELMTTR---DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
V+ Y G V A +VFE+ ++ +WN ++ + EE L+ + +M++ G
Sbjct: 910 VVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGV 969
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
S D TF V+ C+ + + L R +H +++ V N ++ MY + G + A
Sbjct: 970 SADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARK 1029
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F + + +SWN+++ G A + A E+F M +P+ +T+ +LS+ + G
Sbjct: 1030 VFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQ 1089
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
+ F M+ + A V+ + DE + + G E V
Sbjct: 1090 HVETMELFGRMRMRGIGATAEA-LAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKN 1148
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
+L+ H N+ I +E++ N + L Y G ++A IF Q+++
Sbjct: 1149 SLICLYGKHGNVNAARIL---FLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKT 1204
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F +L CS L +QIH+Q I ++ ++ ++++YA G + A F P
Sbjct: 875 FNDLLQQCSKS---HLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSP 931
Query: 398 IH---DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
I +++ WNSI+ HGY E+ALE++ RMR D TF V+ AC+ G
Sbjct: 932 IECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMG 987
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 18/141 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
++ +E +F+K+ +D ++WN M+ GY +G +NA+ F+QM E D T+
Sbjct: 1296 KSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVA 1355
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
V++ + V +E+FD M +++ M Y C GL+ EA +V MP
Sbjct: 1356 VLSACSHAGLVAEGRELFDKM-IKEFRVEPQM-EHYACMVDLLGRAGLLQEASKVVKSMP 1413
Query: 111 LK-DVVSWNLVIGALVNCQRM 130
++ + W GAL+N RM
Sbjct: 1414 VEPNACVW----GALLNSCRM 1430
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 190/639 (29%), Positives = 322/639 (50%), Gaps = 37/639 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVI- 59
+ EA +FD MP+ + V+WN MI + +NGF ++ L +M D+ T T++
Sbjct: 197 VDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILP 256
Query: 60 --AGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
AG + D G G+ V+ +V+ N+M+ Y G ++EA F K
Sbjct: 257 VCAGEGEVDIGMG----IHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNK 312
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEM---GARDVASWTIMVNGLVREGRIVEARKLFD 169
+VVSWN +I A ++ A + +EM G A+ ++N L ++ R L +
Sbjct: 313 NVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKE 372
Query: 170 ------KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
+ + V+ N I Y G + AE +F + D+ ++SW LI G +
Sbjct: 373 LHGYSFRHCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDP 432
Query: 224 DAAISYFKQMPETCEKT-WNSIISVLIRNGLVK------EAHSY-LEKYPYSNIASWTNV 275
A+ QM + ++ W +I S+L+ +K E H Y L ++ T++
Sbjct: 433 RKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSL 492
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ Y G+ SA +F+ M +++ WN MI G +N L E L F + G
Sbjct: 493 LSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHE 552
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
SV CS L L LG++ H +K + + V ++I MYA+ G I+ + F
Sbjct: 553 IAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDG 612
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+ ++ SWN+II HG+ ++A+EL+ERM+ PD T++G+L AC +AGLV++G
Sbjct: 613 LKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEG 672
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
YF M+N ++P+ HY C++D+L R G +D+A+ L+NE+ E +W +LL
Sbjct: 673 LKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPE---EADNRIWSSLLR 729
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
+CR +++GE ++++ELEP+ + Y++L+ +Y G+ + +R+ MKE G++K+
Sbjct: 730 SCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKD 789
Query: 576 PGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
GCSWI++ + F+ GDS PK +R + L I
Sbjct: 790 AGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERI 828
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 134/546 (24%), Positives = 253/546 (46%), Gaps = 36/546 (6%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-----ERDMFTYNTVIAGL 62
+++ +FD M ++ + WN ++ GY +NG + + +F + + D FT+ +VI
Sbjct: 97 DSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKAC 156
Query: 63 MQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+V+ EV GM ++ DV N+++ Y G +DEA++VF MP ++VSW
Sbjct: 157 GGILDVR-LGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSW 215
Query: 118 NLVIGAL----VNCQRMDLAESYFKEMG-ARDVASWTIMVNGLVREGRI---VEARKLFD 169
N +I A + DL E G DV + ++ EG + + L
Sbjct: 216 NSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAV 275
Query: 170 KMP-AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
K+ +++V N M+ Y G + A+ F K +++++ SW +I+ ++ A +
Sbjct: 276 KLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFN 335
Query: 229 YFKQMPETCEKTWNSIISVL---------IRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
++M E+ + +++L ++ +KE H Y ++ + ++ I+ Y
Sbjct: 336 LLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVELSNAFILAY 395
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G + SA KVF + + V+ WN +I G +N + L QM SG PD T +
Sbjct: 396 AKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTIS 455
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
S+L C+ L +L G++IH ++ V ++++ Y CG SA + F +
Sbjct: 456 SLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDK 515
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
+++SWN++I G + +G ++L LF + + +I V V ACS + G+
Sbjct: 516 NLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAH 575
Query: 460 DCMKNKYFLQPRSAHYTC-VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
+ LQ A C ++D+ + G I E+ + + ++ + W A++ A
Sbjct: 576 GYVLKA--LQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNV----ASWNAIIVAHG 629
Query: 519 IHNNIK 524
IH + K
Sbjct: 630 IHGHGK 635
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 138/299 (46%), Gaps = 41/299 (13%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM-HDRDLT-------SW 210
G +++R +FD M K++ WN +++GY NG G +F + D D S
Sbjct: 93 GSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSV 152
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEK-TWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
+ G+++ R + +M + N+++ + + G V EA + P +N+
Sbjct: 153 IKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNL 212
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
SW ++I + E G +RD F L LGEEGL
Sbjct: 213 VSWNSMICAFSENG------------FSRDS-------FDLLMEMLGEEGLL-------- 245
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
PD T ++L +C+ +D+G IH A+K+ ++ V+NAM+ MY++CG + A
Sbjct: 246 ---PDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEA 302
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT--DFKPDDITFVGVLSAC 446
+ F +++SWN++I + G +A L + M++ + K +++T + VL AC
Sbjct: 303 QMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC 361
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 2/185 (1%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGP 331
T +I Y G + VF+ M T+++ WN ++ G N L + +K F+ + ++
Sbjct: 83 TRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDF 142
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
PDN TF SV+ C + + LG IH IK+ V NA++ MY +CG + A+
Sbjct: 143 QPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMK 202
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELF-ERMRLTDFKPDDITFVGVLSACSYAG 450
F +P +++SWNS+IC + +G++ + +L E + PD +T V +L C+ G
Sbjct: 203 VFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEG 262
Query: 451 LVDQG 455
VD G
Sbjct: 263 EVDIG 267
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 49/248 (19%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+ A+ LFD+M ++ V+WN MI GY +NG ++ LF + + ++ I +
Sbjct: 500 GKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVF 559
Query: 64 ----QSDNVQGAKE----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
Q ++ KE V ++ D S+I Y +G I E+ +VF G+ K+V
Sbjct: 560 GACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVA 619
Query: 116 SWNLV--------------------------------IGALVNCQRMDLAE---SYFKEM 140
SWN + IG L+ C L E YFKEM
Sbjct: 620 SWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEM 679
Query: 141 G-----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGV 194
+ + +++ L R GR+ +A +L ++MP + D + W+ ++ G + +
Sbjct: 680 QNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEI 739
Query: 195 AEDLFQKM 202
E + +K+
Sbjct: 740 GEKVAKKL 747
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 335 NATFTSV---------LTICSDLPTLDLGRQIHAQAIKIA--RNQFTTVSNAMITMYARC 383
NA F S+ L C + ++ GR++H RN + ++ +I MYA C
Sbjct: 34 NAAFISLQAKEAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYV-LNTRLIKMYAMC 92
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF-ERMRLTDFKPDDITFVGV 442
G+ + L F ++ ++I WN+++ G +G +++F + + TDF+PD+ TF V
Sbjct: 93 GSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSV 152
Query: 443 LSACSYAGLVD-QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
+ AC G++D + M K L +V + G+ G +DEAM + +
Sbjct: 153 IKAC--GGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFD 205
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 191/616 (31%), Positives = 314/616 (50%), Gaps = 36/616 (5%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------ERDMFTYNTVIAG 61
+A +FD+MP+RD V+WN +I +GF + A+ F M + D+ T +V+
Sbjct: 190 DAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPV 249
Query: 62 LMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
++++ A+ V G+ V N+++ Y G + +VF + ++V+S
Sbjct: 250 CAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVIS 309
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVN---------GLVREGRIVEARKL 167
WN +I + + A F+ M + ++ ++ GL + G V L
Sbjct: 310 WNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSL 369
Query: 168 FDKMPAK-DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
KM + DV N +I Y +G +A +F KM R++ SW +I +R A
Sbjct: 370 --KMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEA 427
Query: 227 ISYFKQMPETCEK----TWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG- 278
+ +QM E T+ +++ R G + KE H+ + + S +N +
Sbjct: 428 VELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDM 487
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G + A VF + + RD +N++I G + E L+ F +M+ G PD +F
Sbjct: 488 YSKCGCLNLAQNVFNI-SVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSF 546
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
V++ C++L + G++IH ++ + V+N+++ +Y RCG I A F +
Sbjct: 547 MGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQN 606
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
D+ SWN++I G G + A+ LFE M+ + D ++FV VLSACS+ GL+++GR Y
Sbjct: 607 KDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKY 666
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F M + ++P HY C+VDLLGR GL++EA +L IR I +WGALLGACR
Sbjct: 667 FKMMCD-LNIEPTHTHYACMVDLLGRAGLMEEAADL---IRGLSIIPDTNIWGALLGACR 722
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
IH NI++G A E + EL+P + G Y++L+ MY R ++A ++ MK G KK PGC
Sbjct: 723 IHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNPGC 782
Query: 579 SWIQINDGGHVFLSGD 594
SW+Q+ D H FL G+
Sbjct: 783 SWVQVGDLVHAFLVGE 798
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 162/607 (26%), Positives = 269/607 (44%), Gaps = 72/607 (11%)
Query: 18 QRDTVTWNVMIRGYFKNGFLD-----NAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAK 72
R WN +IR G D N M P D TY V+ V+ +
Sbjct: 100 SRSAFLWNTLIRANSIAGVFDGFGTYNTMVRAGVKP--DECTYPFVLKVCSDFVEVRKGR 157
Query: 73 EV--------FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
EV FDG DV N++++ Y GL +A++VF MP +D VSWN VIG
Sbjct: 158 EVHGVAFKLGFDG----DVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLC 213
Query: 125 VNCQRMDLAESYFKEM-----GARDVASWTIMVNGLVRE------GRIVEARKLFDKMPA 173
+ A +F+ M G + + V + E RIV L +
Sbjct: 214 SLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLG 273
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
V+ N ++ Y G ++ +F ++ +R++ SW +I + A+ F+ M
Sbjct: 274 GHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLM 333
Query: 234 PETCEK----TWNSIISVLIRNGLVK---EAHSYLEKYPYSNIASWTNVIVG-YFEMGEV 285
+ + T +S++ VL GL K E H + K + +N ++ Y + G
Sbjct: 334 IDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSS 393
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A +F M R++ WN MI N L E ++ QM+ G +P+N TFT+VL C
Sbjct: 394 RIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPAC 453
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
+ L L++G++IHA+ I++ + VSNA+ MY++CG + A F ++ + D +S+N
Sbjct: 454 ARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVF-NISVRDEVSYN 512
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR--------- 456
+I G + + ++L LF MRL +PD ++F+GV+SAC+ + QG+
Sbjct: 513 ILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRK 572
Query: 457 --------------YYFDC------MKNKYFLQPRS-AHYTCVVDLLGRFGLIDEAMNLL 495
Y C K Y +Q + A + ++ G G +D A+NL
Sbjct: 573 LFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLF 632
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL--EPNNSGVYLILTEMYLS 553
++ DG+E + A+L AC I+ G + + +L EP ++ Y + ++
Sbjct: 633 EAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDLNIEPTHTH-YACMVDLLGR 691
Query: 554 CGRREDA 560
G E+A
Sbjct: 692 AGLMEEA 698
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 255 KEAHSY--LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE--LMTTRDVTVWNVMIFGL 310
K+ H+Y L + +++ ++I+ Y G +++ +F+ + +R +WN +I
Sbjct: 54 KQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRA- 112
Query: 311 GENDLGE--EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
N + +G + M +G PD T+ VL +CSD + GR++H A K+ +
Sbjct: 113 --NSIAGVFDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDG 170
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
V N ++ Y CG A+ F +P D +SWN++I + HG+ E+AL F M
Sbjct: 171 DVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMV 230
Query: 429 LTD--FKPDDITFVGVLSACS 447
+PD +T V VL C+
Sbjct: 231 AAKPGIQPDLVTVVSVLPVCA 251
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 12/188 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
R RI A +F + +D +WN MI GY G LD A+ LF M E D ++
Sbjct: 590 RCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVA 649
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEALRVFHGMP-LK 112
V++ ++ ++ F M ++ + M+ GL++EA + G+ +
Sbjct: 650 VLSACSHGGLIEKGRKYFKMMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIP 709
Query: 113 DVVSWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
D W ++GA ++L A + E+ + + ++ N R EA K+ +
Sbjct: 710 DTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVRE 769
Query: 170 KMPAKDVQ 177
M ++ +
Sbjct: 770 LMKSRGAK 777
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 192/658 (29%), Positives = 325/658 (49%), Gaps = 91/658 (13%)
Query: 18 QRDTVTWNVMIRGYFKN----------------GFLDNAMC---LFNQMPERDMFTYNTV 58
+RD V+W+ +I Y N GF N C +F ++ + +
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 59 IAGLM------QSD----------------NVQGAKEVFDGMEVRDVVTWNSMISGYVCN 96
I G + +SD +++ A +VFD M R+VVTW MI+ +
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 97 GLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDLAES-------YFKEMGARDVA-- 146
G +A+ +F M L V + +V+ C M L K DV
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183
Query: 147 -SWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN-GCVGVAEDLFQKMHD 204
S M V +G + +ARK+FD+MP +V +W +I GY+ + GC A +LF +M
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEM-- 241
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETC---EKTWNSIISVLIRNGLVKEAHSYL 261
+ G V F + + C W L ++ ++ +
Sbjct: 242 ---------VQGQVKPNHFT-----FSSVLKACANLSDIW-----------LGEQVYALV 276
Query: 262 EKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
K ++I N ++ Y G + +A K F+++ +++ +N ++ ++ EE
Sbjct: 277 VKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAF 336
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
+ F +++ +G + TF S+L+ S + + G QIH++ +K + NA+I+MY
Sbjct: 337 ELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMY 396
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+RCGNI++A F+ + ++ISW S+I G A HG+A +ALE F +M P+++T++
Sbjct: 397 SRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYI 456
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI-- 498
VLSACS+ GL+ +G +F MK ++ + PR HY CVVDLLGR G ++EAM L+N +
Sbjct: 457 AVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPF 516
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
+AD + V LGACR+H N+ +G+ A E ++E +P++ Y++L+ ++ S G+ E
Sbjct: 517 KADAL-----VLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWE 571
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+ I +MKE + KE GCSWI++ + H F GD+SHP+ + L+ L +I+
Sbjct: 572 EVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKE 629
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 122/520 (23%), Positives = 213/520 (40%), Gaps = 135/520 (25%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYN 56
N ++ A +FD+MP R+ VTW +MI + + GF +A+ LF M P+R FT +
Sbjct: 92 NGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDR--FTLS 149
Query: 57 TVIAG----------------LMQS----------------------DNVQGAKEVFDGM 78
V++ +M+S +V A++VFD M
Sbjct: 150 GVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRM 209
Query: 79 EVRDVVTWNSMISGYVCNGLID-EALRVF----HGMPLKDVVSWNLVIGALVNCQRMDLA 133
V +V++W ++I+GYV +G D EA+ +F G + +++ V+ A N + L
Sbjct: 210 PVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLG 269
Query: 134 ESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
E + + +AS + N L+ R G + ARK FD + K++ ++N ++ Y +
Sbjct: 270 EQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKS 329
Query: 190 GCVGVAEDLFQKMHD----------RDLTSWKQLINGLVNSRRIDAAI--SYFKQMPETC 237
A +LF ++ L S I + +I + I S FK C
Sbjct: 330 LNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHIC 389
Query: 238 EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
N++IS+ R G ++ A + N+ SWT++I G+ + G A++ F
Sbjct: 390 ----NALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFH---- 441
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
+M E+G SP+ T+ +VL+ CS + + G +
Sbjct: 442 ---------------------------KMLEAGVSPNEVTYIAVLSACSHVGLISEGLK- 473
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H +++K+ E VP + + ++ L G+
Sbjct: 474 HFKSMKV---------------------------EHGIVPRME--HYACVVDLLGRSGHL 504
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
E+A+EL M FK D + L AC G +D G++
Sbjct: 505 EEAMELVNSM---PFKADALVLRTFLGACRVHGNMDLGKH 541
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 50/222 (22%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
R ++ A+ FD + +++ V++N ++ Y K+ + A LFN++ + FT+ +
Sbjct: 297 RCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFAS 356
Query: 58 VIAG----------------LMQS-------------------DNVQGAKEVFDGMEVRD 82
+++G +++S N++ A +VF+ M +
Sbjct: 357 LLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGN 416
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNCQRMDLAE---SYF 137
V++W SMI+G+ +G AL FH M L+ VS N V I L C + L +F
Sbjct: 417 VISWTSMITGFAKHGFATRALETFHKM-LEAGVSPNEVTYIAVLSACSHVGLISEGLKHF 475
Query: 138 KEMGARD-----VASWTIMVNGLVREGRIVEARKLFDKMPAK 174
K M + + +V+ L R G + EA +L + MP K
Sbjct: 476 KSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFK 517
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 17/190 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
R I+ A +F++M + ++W MI G+ K+GF A+ F++M E + TY
Sbjct: 398 RCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIA 457
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
V++ + + F M+V + + Y C +G ++EA+ + + MP
Sbjct: 458 VLSACSHVGLISEGLKHFKSMKVEHGIV--PRMEHYACVVDLLGRSGHLEEAMELVNSMP 515
Query: 111 LK-DVVSWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVREGRIVEARK 166
K D + +GA MDL A E D A++ ++ N G+ E +
Sbjct: 516 FKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAE 575
Query: 167 LFDKMPAKDV 176
+ KM +++
Sbjct: 576 IRKKMKERNL 585
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 196/635 (30%), Positives = 327/635 (51%), Gaps = 35/635 (5%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTY 55
+R + +A +F KM +R+ +WNV++ GY K G+ D A+CL+++M + D++T+
Sbjct: 140 VRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTF 199
Query: 56 NTVIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
V+ ++ +EV G E+ D+ N++I+ YV G + A +F MP
Sbjct: 200 PCVLRTCGGIPDLARGREVHVHVVRYGYEL-DIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 111 LKDVVSWNLVI-GALVNCQRMDLAESYFKEMGAR---DVASWTIMVN-----GLVREGRI 161
+D++SWN +I G N + + +F G D+ + T +++ G R GR
Sbjct: 259 RRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
+ A + A D+ N + YL G AE LF +M +D+ SW +I+G +
Sbjct: 319 IHAYVITTGF-AVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNF 377
Query: 222 RIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVK---EAHSY-LEKYPYSNIASWT 273
+ AI ++ M + K T +++S G + E H ++ S +
Sbjct: 378 LPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
N+I Y + + A+ +F + ++V W +I GL N+ E L FF QMK + P
Sbjct: 438 NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQP 496
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+ T T+ L C+ + L G++IHA ++ + NA++ MY RCG + A +F
Sbjct: 497 NAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQF 556
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+S D+ SWN ++ G + G +ELF+RM +PD+ITF+ +L C + +V
Sbjct: 557 NSQK-KDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVR 615
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
QG YF M+ +Y + P HY CVVDLLGR G + EA + ++ + P VWGAL
Sbjct: 616 QGLMYFSKME-EYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKM---PVTPDPAVWGAL 671
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
L ACRIH+NI +GE++ +R+ EL+ + G Y++L +Y CG+ + ++ MKENG+
Sbjct: 672 LNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLT 731
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLN 608
+ GCSW+++ H FLS D HP+ + +L+
Sbjct: 732 VDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLD 766
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 212/464 (45%), Gaps = 46/464 (9%)
Query: 90 ISGYVCNGLIDEALRVFHGM-PLKDVVSWNLVIGALVNCQRMDLAESYFK-------EMG 141
+ G NG ++EA+++ + M L+ V ++ + + C+ E K M
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+ V + VR G +V+A +F KM +++ +WN+++ GY G A L+ +
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M W + G + + F + TC I L R +E H ++
Sbjct: 186 M------LW---VGG------VKPDVYTFPCVLRTCGG-----IPDLARG---REVHVHV 222
Query: 262 EKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+Y Y +I +I Y + G+V SA +F+ M RD+ WN MI G EN +G EGL
Sbjct: 223 VRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGL 282
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
K F M+ PD T TSV++ C L LGR IHA I +V N++ MY
Sbjct: 283 KLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMY 342
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
G+ + A FS + DI+SW ++I G Y+ EKA++ + M KPD+IT
Sbjct: 343 LYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVA 402
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV----VDLLGRFGLIDEAMNLLN 496
VLSAC+ G +D G +K ++ R Y V +++ + ID+A+++ +
Sbjct: 403 AVLSACATLGDLDTGVEL-----HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV-MELEPN 539
I + W +++ R++N I ++ M L+PN
Sbjct: 458 NIPRKNV----ISWTSIIAGLRLNNRCFEALIFFRQMKMTLQPN 497
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 179/385 (46%), Gaps = 34/385 (8%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFH-----GMP 110
N +A ++ N+ A VF M R++ +WN ++ GY G DEA+ ++H G
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGV 192
Query: 111 LKDVVSWNLVI---GALVNCQRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARK 166
DV ++ V+ G + + R + G D+ ++ V+ G + AR
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
LFD+MP +D+ +WN MI+GY +NG LF M R L+ +D
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAM--RGLS--------------VDPD 296
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEV 285
+ + CE +L L ++ H+Y+ ++ +I+ ++ Y G
Sbjct: 297 LMTLTSVISACE--------LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSW 348
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A K+F M +D+ W MI G N L E+ + + M + PD T +VL+ C
Sbjct: 349 REAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSAC 408
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
+ L LD G ++H AIK + V+N +I MY++C I AL F ++P ++ISW
Sbjct: 409 ATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWT 468
Query: 406 SIICGLAYHGYAEKALELFERMRLT 430
SII GL + +AL F +M++T
Sbjct: 469 SIIAGLRLNNRCFEALIFFRQMKMT 493
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 126/298 (42%), Gaps = 42/298 (14%)
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
+ GL N EE +K M+E + D F +++ +C + G ++++ A+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+ + NA + M+ R GN+ A F + ++ SWN ++ G A GY ++A+ L+ R
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185
Query: 427 MR-LTDFKPDDITFVGVLSACSYAGLVDQGR-----------------------YYFDC- 461
M + KPD TF VL C + +GR Y C
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 462 -MKNKYFL---QPRSAHYTCVVDLLGRF--GLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
+K+ L PR + + G F G+ E + L +R ++ +++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVIS 305
Query: 516 ACRIHNNIKVGE------IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
AC + + ++G I +++ NS LT+MYL G +A+++F++M
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNS-----LTQMYLYAGSWREAEKLFSRM 358
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 195/641 (30%), Positives = 327/641 (51%), Gaps = 36/641 (5%)
Query: 4 ARIQEAQNLFDKMPQR-DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
+R EA +LF K+ R + V WNVMI G+ +NG + ++ L++ + V A
Sbjct: 596 SRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENC---KLVSASF 652
Query: 63 MQSDNVQGAKEVFD-GMEVR-DVVTWNSMISGYVC---------NGLIDEALRVFHGMPL 111
+ EV D G +V DV+ N YVC +G +++A +VF +
Sbjct: 653 TGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLD 712
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEM--GARDVASWTIM-------VNGLVREGRIV 162
K+V N +I A + R A + +M G V S+TI V G GR V
Sbjct: 713 KEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTV 772
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
A + M + +V + ++ Y G A+ +F M +RD+ +W +I G +RR
Sbjct: 773 HAEVIKRSMQS-NVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRR 831
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE-------AHSY-LEKYPYSNIASWTN 274
A+ F+ M + K + +++ +I GL E H + +++ S++ +
Sbjct: 832 FKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACS 891
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ Y + G SA VF M +++ WN MI N L E + Q+ + G D
Sbjct: 892 LVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLD 951
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ + T+VL S + L G+ +HA I++ V NA+I MY +CG ++ A L F
Sbjct: 952 SVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFE 1011
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
++P ++++WNS+I G HG E+A+ LF+ M+ ++ PD++TF+ ++++CS++G+V++
Sbjct: 1012 NMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEE 1071
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
G F M+ +Y ++PR HY VVDLLGR G +D+A + IR I+ +VW LL
Sbjct: 1072 GLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSF---IRGMPIDADRSVWLCLL 1128
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
ACR H N+++GE+ + ++++EP Y+ L +Y + A + A MK G+KK
Sbjct: 1129 FACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKK 1188
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
PGCSWI++ + VF SGDSS + + L+ L + +E
Sbjct: 1189 SPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNME 1229
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 220/503 (43%), Gaps = 80/503 (15%)
Query: 9 AQNLFDKMPQR-----DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-------------- 49
A +FDKM + D WN +I GYFK G + + F +M E
Sbjct: 495 ALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVL 554
Query: 50 --------------------RDMFT----YNTVIAGLMQS-DNVQGAKEVFDGMEVR-DV 83
R+MF T + G+ S A +F +E R ++
Sbjct: 555 GICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNI 614
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKD--VVSWNLVIGALVNCQRMDLAE------- 134
V WN MI G+V NG+ +++L ++ ++ +VS + GA C ++ +
Sbjct: 615 VAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFT-GAFTACSHGEVLDFGRQVHC 673
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
K D T ++ + G + +A+K+FD++ K+V+ N MI+ ++ NG
Sbjct: 674 DVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYD 733
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A L+ KM + V+S I + +S C SV+
Sbjct: 734 ALGLYNKMKAGETP---------VDSFTISSLLS-------GC--------SVVGSYDFG 769
Query: 255 KEAHS-YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
+ H+ +++ SN+A + ++ Y++ G A VF M RDV W MI G +N
Sbjct: 770 RTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQN 829
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
++ L F M++ G D+ TSV++ L ++LG IH AIK V+
Sbjct: 830 RRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVA 889
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
+++ MY++ G +SA + FSS+P ++++WNS+I +++G E ++ L ++ F
Sbjct: 890 CSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFY 949
Query: 434 PDDITFVGVLSACSYAGLVDQGR 456
D ++ VL A S + +G+
Sbjct: 950 LDSVSITTVLVAVSSVAALLKGK 972
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 173/387 (44%), Gaps = 58/387 (14%)
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
F + +TC N I +V L+ PY IA T++I Y + G +GSA+
Sbjct: 444 FPSLLKTCASLSNLYHGRTIHASIVTMG---LQSDPY--IA--TSLINMYVKCGLLGSAL 496
Query: 290 KVFELMT-----TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
+VF+ M+ D+TVWN +I G + EEGL F +M+E G PD + + VL I
Sbjct: 497 QVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGI 556
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIH-D 400
C+ L GRQIH I RN F + A+I MY+ C A F + +
Sbjct: 557 CNRLSWYMAGRQIHGY---IIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSN 613
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-YYF 459
I++WN +I G +G EK+LEL+ + + K +F G +ACS+ ++D GR +
Sbjct: 614 IVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHC 673
Query: 460 DCMKNKYFLQPRSAHYTC--VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
D +K + P Y C ++ + + G +++A + +++ +E+ + A +G
Sbjct: 674 DVIKMNFQDDP----YVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNG 729
Query: 518 R------IHNNIKVGE--------------------------IAGERVMELEPNNSGVYL 545
R ++N +K GE + E + +N +
Sbjct: 730 RAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQS 789
Query: 546 ILTEMYLSCGRREDAKRIFAQMKENGV 572
L MY CG EDA +F MKE V
Sbjct: 790 ALLTMYYKCGSTEDADSVFYTMKERDV 816
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 137/619 (22%), Positives = 249/619 (40%), Gaps = 97/619 (15%)
Query: 28 IRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLMQSDNVQGAKEVFDGMEV--- 80
I+ + G A+ L ++ P + FT+ +++ N+ + + +
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472
Query: 81 -RDVVTWNSMISGYVCNGLIDEALRVFHGM-----PLKDVVSWNLVIGALVNCQRMDLAE 134
D S+I+ YV GL+ AL+VF M D+ WN VI +
Sbjct: 473 QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 532
Query: 135 SYF---KEMGAR-DVASWTIMVNGLVR-----EGRIVEA---RKLFDKMPAKDVQAWNLM 182
+ F +E+G R D S +I++ R GR + R +F+ P
Sbjct: 533 AQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDP---------- 582
Query: 183 IAGYLDNGCVGV---------AEDLFQKMHDR-DLTSWKQLINGLVNSRRIDAAISYFKQ 232
YL+ +G+ A LF K+ +R ++ +W +I G V + + ++ +
Sbjct: 583 ---YLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSL 639
Query: 233 MP-ETCEKTWNSIISVLI--RNGLV----KEAHSYLEKYPYSNIA-SWTNVIVGYFEMGE 284
E C+ S +G V ++ H + K + + T+++ Y + G
Sbjct: 640 AKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGS 699
Query: 285 VGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
V A KVF+ + ++V + N MI N + L + +MK D+ T +S+L+
Sbjct: 700 VEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSG 759
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
CS + + D GR +HA+ IK + + +A++TMY +CG+ + A F ++ D+++W
Sbjct: 760 CSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAW 819
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS-------------------- 444
S+I G + + AL+LF M K D V+S
Sbjct: 820 GSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIK 879
Query: 445 ---------ACSYA------GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
ACS G + F M NK + + ++ GL +
Sbjct: 880 RGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVA-----WNSMISCYSWNGLPE 934
Query: 490 EAMNLLNEIRADGIEV-SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
++NLL +I G + S ++ L+ + +K + ++ P++ V L
Sbjct: 935 MSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALI 994
Query: 549 EMYLSCGRREDAKRIFAQM 567
+MY+ CG + A+ IF M
Sbjct: 995 DMYVKCGCLKYAQLIFENM 1013
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 177/412 (42%), Gaps = 62/412 (15%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
++ +++A+ +FD++ ++ N MI + NG +A+ L+N+M D FT ++
Sbjct: 696 KSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISS 755
Query: 58 VIAGL--------------------MQSD---------------NVQGAKEVFDGMEVRD 82
+++G MQS+ + + A VF M+ RD
Sbjct: 756 LLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERD 815
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV-------NCQRMDLAES 135
VV W SMI+G+ N +AL +F M + V + + V+ +++ N + L
Sbjct: 816 VVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHG 875
Query: 136 YFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ + G DV +V+ + G A +F MP K++ AWN MI+ Y NG +
Sbjct: 876 FAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEM 935
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK---------QMPETCEKTWNSII 245
+ +L ++ I ++ + AA+ K Q+P + N++I
Sbjct: 936 SINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQ-VENALI 994
Query: 246 SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM----TTRDVT 301
+ ++ G +K A E P N+ +W ++I GY G A+++F+ M T D
Sbjct: 995 DMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEV 1054
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMK-ESGPSPDNATFTSVLTICSDLPTLD 352
+ +I + + EEGL F M+ E G P + SV+ + LD
Sbjct: 1055 TFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLD 1106
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 184/570 (32%), Positives = 285/570 (50%), Gaps = 46/570 (8%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PLKD--------VV 115
V AK VFDGM R+ V+W +M+SGY +EA +F M PL+ +
Sbjct: 174 VSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLS 233
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
+ ++ +G L+ Q L K+ V+ +V + + A ++F ++
Sbjct: 234 AVSVPLGLLMGTQLHGLV---LKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERN 290
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
W+ MI GY NG A +F +MH T + G++N+
Sbjct: 291 SITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNA--------------- 335
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVF-E 293
C ++ K+ H + K + + +V Y + G +G A F +
Sbjct: 336 -CSDMGALVVG--------KQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQ 386
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
L DV +W MI G +N EE L + +M + G P T TSVL C+ L LDL
Sbjct: 387 LYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDL 446
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
G+Q+HAQ +K + +V A+ TMY++CGN++ +++ F +P D+ISWNSII +
Sbjct: 447 GKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQ 506
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSA 473
HG AL++FE M+L PD ITF+ +LSACS+ GLVD+G +YF M Y L P
Sbjct: 507 HGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLD 566
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV 533
HY C+VD+L R G + EA + ++ I I+ +W +LGACR + VG AGE++
Sbjct: 567 HYACMVDILSRAGQLKEAKDFIDSIT---IDHGTCLWRIVLGACRSLRDFDVGAYAGEQL 623
Query: 534 MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSG 593
MEL +S Y++L+ +Y + + D +R+ M+ GV K+ GCSW+++ + HVF+ G
Sbjct: 624 MELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDLGCSWVELYNRVHVFVVG 683
Query: 594 DSSHPKFHRLRYLLNLL--HTEIEREILFD 621
+ HP+ + L L H + E LFD
Sbjct: 684 EQQHPEAENINVELIRLAKHMKDEECFLFD 713
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 182/415 (43%), Gaps = 49/415 (11%)
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQM---PETCEKTWNSIISVLIRNGLVKEA---- 257
RD+ SW L+N L + +A+S+F+ M PE + +S + V A
Sbjct: 82 RDVASWNSLLNPLSRHHPV-SALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGA 140
Query: 258 --HSYLEKYPYS----NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
H+ K P S N+ T ++ Y ++G V A +VF+ M R+ W M+ G
Sbjct: 141 VTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYA 200
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT-LDLGRQIHAQAIKIARNQFT 370
EE + F M + P N T+ + +P L +G Q+H +K F
Sbjct: 201 TGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFV 260
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
+V N+++TMYA+ + +A+ F S + I+W+++I G A +G A A +F +M +
Sbjct: 261 SVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSS 320
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI-- 488
F P + TFVGVL+ACS G + G+ C+ K + + + +VD+ + G I
Sbjct: 321 GFTPTEFTFVGVLNACSDMGALVVGKQT-HCLMVKLGFETQVYVKSALVDMYAKCGCIGD 379
Query: 489 ------------------------------DEAMNLLNEIRADGIEVSPTVWGALLGACR 518
+EA+ L + + GI S ++L AC
Sbjct: 380 AKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACA 439
Query: 519 IHNNIKVGEIAGERVMELEPNNSG-VYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ +G+ ++++ + G V L+ MY CG ED+ +F +M + V
Sbjct: 440 CLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDV 494
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 196/434 (45%), Gaps = 34/434 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----P-ERDMFTYNTVIA 60
+ +A+ +FD M R+ V+W M+ GY + A LF M P E++ F V++
Sbjct: 174 VSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLS 233
Query: 61 ------GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
GL+ + G + DG+ V V NS+++ Y +D A+RVF ++
Sbjct: 234 AVSVPLGLLMGTQLHGLV-LKDGL-VGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNS 291
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVEARKLFDK 170
++W+ +I + A F +M + ++ ++N G +V ++
Sbjct: 292 ITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCL 351
Query: 171 MPA----KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD-RDLTSWKQLINGLVNSRRIDA 225
M V + ++ Y GC+G A+D F +++D D+ W +I G V + +
Sbjct: 352 MVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEE 411
Query: 226 AISYFKQM-PETCEKTWNSIISVLIRNG------LVKEAHSYLEKYPYSNIAS-WTNVIV 277
A+ + +M + ++ ++ SVL L K+ H+ + K +S S T +
Sbjct: 412 ALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALST 471
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
Y + G + ++ VF M RDV WN +I ++ G + L F +MK G +PD+ T
Sbjct: 472 MYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHIT 531
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSS 395
F ++L+ CS + +D G + +A+ N T+ + M+ + +R G ++ A S
Sbjct: 532 FINLLSACSHMGLVDRG-WFYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKEAKDFIDS 590
Query: 396 VPI-HDIISWNSII 408
+ I H W ++
Sbjct: 591 ITIDHGTCLWRIVL 604
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 160/446 (35%), Positives = 255/446 (57%), Gaps = 13/446 (2%)
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKT 240
+I Y G +G A +F ++ +DL SW +I+G R A+ F++M E +
Sbjct: 168 LITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPN 227
Query: 241 WNSIISVLIRNGLVKEAH--SYLEKYPYSNIASW-----TNVIVGYFEMGEVGSAIKVFE 293
S++SVL G + + +++E++ N + + +I Y + G++ SA ++F+
Sbjct: 228 EMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFD 287
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
M +D WN MI G +N + EE +K F M+ S +PD T +L+ C+ + LDL
Sbjct: 288 SMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDL 347
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
G+Q+ A + V A++ MYA+CG++ +A F +P + +SWN++I LA+
Sbjct: 348 GKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAF 407
Query: 414 HGYAEKALELFERM--RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
HG A++AL LF+ M P+DITFVGVLSAC +AGLVD+GR F M + + L P+
Sbjct: 408 HGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPK 467
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
HY+C+VDL R G ++EA + + + EV + GALLGAC+ NI + E +
Sbjct: 468 IEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEV---ILGALLGACQKRKNIDISERVMK 524
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
++ELEP+NSG Y+I +++Y + R +D+ R+ MK+ GV K PGCSWI IN H F
Sbjct: 525 LLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFH 584
Query: 592 SGDSSHPKFHRLRYLLNLLHTEIERE 617
+GD H ++ + +L+LL ++ RE
Sbjct: 585 AGDVLHQEWIEIHQILDLLIDDLRRE 610
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 156/303 (51%), Gaps = 14/303 (4%)
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++I Y G++G A KVF+ ++ +D+ WN MI G + E + F +M E+G P
Sbjct: 167 SLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQP 226
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAI--KIARNQFTTVSNAMITMYARCGNIQSALL 391
+ + SVL C +L L LG + + K+ N F + +A+I MY +CG++ SA
Sbjct: 227 NEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYF--MGSALIHMYGKCGDLVSARR 284
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F S+ D ++WN++I G A +G +E+A++LF+ MR++ PD IT +G+LSAC+ G
Sbjct: 285 IFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGA 344
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
+D G+ + ++ Q T +VD+ + G +D A + + + EVS W
Sbjct: 345 LDLGK-QVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGM-PNKNEVS---WN 399
Query: 512 ALLGACRIHNNIKVGEIAGERVME----LEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
A++ A H + + +M + PN+ +L+ + G ++ +R+F M
Sbjct: 400 AMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSAC-VHAGLVDEGRRLFHMM 458
Query: 568 KEN 570
+
Sbjct: 459 SSS 461
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 134/305 (43%), Gaps = 48/305 (15%)
Query: 303 WNVMIFGLGEN-DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
+NVMI GL + L+F+ +MK G P+N T+ + CS+L ++ GR H
Sbjct: 94 FNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSV 153
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
I+ ++ VS+++ITMYARCG + A F + D++SWNS+I G + +A +A+
Sbjct: 154 IRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAV 213
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-------------------------- 455
LF M F+P++++ V VL AC G + G
Sbjct: 214 GLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMY 273
Query: 456 ---------RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
R FD MK K + ++ + G+ +EA+ L ++R
Sbjct: 274 GKCGDLVSARRIFDSMKKK-----DKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPD 328
Query: 507 PTVWGALLGACRIHNNIKVGE----IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
+L AC + +G+ A ER + ++ V L +MY CG ++A R
Sbjct: 329 QITLIGILSACASIGALDLGKQVEIYASERGFQ---DDVYVGTALVDMYAKCGSLDNAFR 385
Query: 563 IFAQM 567
+F M
Sbjct: 386 VFYGM 390
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 152/353 (43%), Gaps = 36/353 (10%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+ D +++I + + A++VFD + +D+V+WNSMISGY EA+ +F
Sbjct: 159 DEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFRE 218
Query: 109 MP----LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT-IMVNGLV----REG 159
M + +S V+GA + L ++ +E + + M + L+ + G
Sbjct: 219 MMEAGFQPNEMSLVSVLGACGELGDLKLG-TWVEEFVVENKMTLNYFMGSALIHMYGKCG 277
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
+V AR++FD M KD WN MI GY NG A LFQ M + + G+++
Sbjct: 278 DLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILS 337
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
+ A+ KQ+ E+ ++ T ++ Y
Sbjct: 338 ACASIGALDLGKQVEIYAS-----------------------ERGFQDDVYVGTALVDMY 374
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP--SPDNAT 337
+ G + +A +VF M ++ WN MI L + +E L F M G SP++ T
Sbjct: 375 AKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDIT 434
Query: 338 FTSVLTICSDLPTLDLGRQI-HAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
F VL+ C +D GR++ H + + M+ +++R G+++ A
Sbjct: 435 FVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEA 487
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 143/322 (44%), Gaps = 58/322 (18%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----------- 50
R ++ +A+ +FD++ Q+D V+WN MI GY K A+ LF +M E
Sbjct: 174 RCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVS 233
Query: 51 ----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
+ F + +I + ++ A+ +FD M+ +D
Sbjct: 234 VLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKD 293
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQR---MDLA---ES 135
VTWN+MI+GY NG+ +EA+++F M + + +IG L C +DL E
Sbjct: 294 KVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEI 353
Query: 136 YFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
Y E G + DV T +V+ + G + A ++F MP K+ +WN MI+ +G
Sbjct: 354 YASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQE 413
Query: 195 AEDLFQKMHDRDLT------SWKQLINGLVNSRRIDAAISYFKQMPETCE-----KTWNS 243
A LF+ M + T ++ +++ V++ +D F M + + ++
Sbjct: 414 ALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSC 473
Query: 244 IISVLIRNGLVKEAHSYLEKYP 265
++ + R G ++EA ++ P
Sbjct: 474 MVDLFSRAGHLEEAWDFVMTMP 495
>gi|345505222|gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium sativum]
Length = 597
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 285/532 (53%), Gaps = 29/532 (5%)
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVNCQRMDLA 133
E D WN++I + +L +F +G+ + D S +LV+ A C R+
Sbjct: 66 ETEDPFLWNAVIKSHSHGTDPRRSLFLFCLMLENGVSV-DKFSLSLVLKA---CSRLGFV 121
Query: 134 ESYFKEMG-ARDVASWT------IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
++ G R W+ ++ ++ G + +R++FD+MP +D ++N MI GY
Sbjct: 122 KAGMXIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGYSRQVFDRMPQRDSVSYNSMIDGY 181
Query: 187 LDNGCVGVAEDLFQKMHD--RDLTSWKQLINGLVN-SRRIDAAISYFKQMPETCEKTWNS 243
+ G + A +LF M ++L SW LI+G S ++ A F +MPE +WNS
Sbjct: 182 VKCGLIESARELFDLMPKEMKNLISWNCLISGYAQTSDGVNIASKLFSEMPEKDLISWNS 241
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+I +++G +++A + P ++ +W +I GY ++G + A +F+ + RDV +
Sbjct: 242 MIDGYVKHGRIEDAKDLFDVMPRRDVITWATMIDGYAKLGFIHQAKTLFDQIPHRDVVAY 301
Query: 304 NVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
N M+ G +N E L+ F++M KES SPD T VL+ + L L +H
Sbjct: 302 NSMMAGYVQNKYHMEALELFIKMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMH---F 358
Query: 363 KIARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
I + QF + A+I MY++CG+IQ A+L F + +I WN+II GLA HG
Sbjct: 359 YIVKKQFFIGGKLGVALIDMYSKCGSIQHAMLVFKGLENKNIDHWNAIIGGLAIHGLGGP 418
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A ++ ++ KPDDITF+GVL+ACS++GLV +G F+ M+ K+ ++PR HY C+V
Sbjct: 419 AFDMLLQIERLSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMV 478
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
D+L R G I+ A L+ ++ IE + +W L AC H ++GE+ + ++
Sbjct: 479 DILSRSGSIELAKILIEKM---PIEPNDVIWRTFLTACSHHKEFEMGELVAKHLILQAGY 535
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
N Y++L+ MY SCG +D +R+ MKE ++K PGCSWI+++ H F
Sbjct: 536 NPSSYVLLSNMYASCGMWKDVRRVRTMMKERKIQKIPGCSWIELDGRVHEFF 587
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 210/420 (50%), Gaps = 32/420 (7%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGLMQSDNVQGAKEVF 75
D + +++++ + GF+ M + + + D+F N +I ++ + +++VF
Sbjct: 104 DKFSLSLVLKACSRLGFVKAGMXIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGYSRQVF 163
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWN-LVIGALVNCQRMDL 132
D M RD V++NSMI GYV GLI+ A +F MP +K+++SWN L+ G +++
Sbjct: 164 DRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPKEMKNLISWNCLISGYAQTSDGVNI 223
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A F EM +D+ SW M++G V+ GRI +A+ LFD MP +DV W MI GY G +
Sbjct: 224 ASKLFSEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDVMPRRDVITWATMIDGYAKLGFI 283
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSIISV 247
A+ LF ++ RD+ ++ ++ G V ++ A+ F +M + E T ++S
Sbjct: 284 HQAKTLFDQIPHRDVVAYNSMMAGYVQNKYHMEALELFIKMEKESHLSPDETTLVIVLSA 343
Query: 248 LIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVW 303
+ + G + +A H Y+ K + ++ Y + G + A+ VF+ + +++ W
Sbjct: 344 IAQLGRLSKAMDMHFYIVKKQFFIGGKLGVALIDMYSKCGSIQHAMLVFKGLENKNIDHW 403
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLGRQ 356
N +I GL + LG +Q++ PD+ TF VL CS L +L R+
Sbjct: 404 NAIIGGLAIHGLGGPAFDMLLQIERLSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRR 463
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYH 414
H ++ M+ + +R G+I+ A + +PI +D+I W + + ++H
Sbjct: 464 KHKIEPRLQH------YGCMVDILSRSGSIELAKILIEKMPIEPNDVI-WRTFLTACSHH 516
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 193/397 (48%), Gaps = 25/397 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTVIAGLMQ-S 65
++ +FD+MPQRD+V++N MI GY K G +++A LF+ MP+ +++ ++N +I+G Q S
Sbjct: 159 SRQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPKEMKNLISWNCLISGYAQTS 218
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D V A ++F M +D+++WNSMI GYV +G I++A +F MP +DV++W +I
Sbjct: 219 DGVNIASKLFSEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDVMPRRDVITWATMIDGYA 278
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP-----AKDVQAWN 180
+ A++ F ++ RDV ++ M+ G V+ +EA +LF KM + D
Sbjct: 279 KLGFIHQAKTLFDQIPHRDVVAYNSMMAGYVQNKYHMEALELFIKMEKESHLSPDETTLV 338
Query: 181 LMIAGYLDNGCVGVAEDL-FQKMHDRDLTSWK---QLINGLVNSRRIDAAISYFKQMPET 236
++++ G + A D+ F + + K LI+ I A+ FK +
Sbjct: 339 IVLSAIAQLGRLSKAMDMHFYIVKKQFFIGGKLGVALIDMYSKCGSIQHAMLVFKGLENK 398
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYFEMGEVGSAIKVF 292
WN+II L +GL A L + +I ++ V+ G V + F
Sbjct: 399 NIDHWNAIIGGLAIHGLGGPAFDMLLQIERLSIKPDDITFIGVLNACSHSGLVKEGLLCF 458
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEG-LKFFVQMKESGP-SPDNATFTSVLTICSDLPT 350
ELM + + +G + L G ++ + E P P++ + + LT CS
Sbjct: 459 ELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKILIEKMPIEPNDVIWRTFLTACSHHKE 518
Query: 351 LDLGRQIHAQAIKIA---RNQFTTVSNAMITMYARCG 384
++G + I A + + +SN MYA CG
Sbjct: 519 FEMGELVAKHLILQAGYNPSSYVLLSN----MYASCG 551
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 186/668 (27%), Positives = 326/668 (48%), Gaps = 81/668 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+++A+ +FD M + V+W MI GY +NG ++A+ ++ QM D T+ +VI
Sbjct: 210 MKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKA 269
Query: 62 L------------------------MQSDN-----------VQGAKEVFDGMEVRDVVTW 86
+ S N ++ A VF + +D+++W
Sbjct: 270 CYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISW 329
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-LVIGALVNCQRMDLAESYFKEMGA--- 142
+MI+GY+ G EAL +F + + N + G++ + L Y K++
Sbjct: 330 GTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCV 389
Query: 143 -----RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
R+V + + + + G + A+ F ++ D+ +WN +IA + DNG A D
Sbjct: 390 KFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAID 449
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
F++M LT +I+Y + TC +R ++
Sbjct: 450 FFRQMIHIGLTP---------------DSITYISLLC-TCGSP--------VRLNQGRQI 485
Query: 258 HSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVF-ELMTTRDVTVWNVMIFGLGENDL 315
HSY+ K + I +++ Y + + A+ VF ++ ++ WN ++ +
Sbjct: 486 HSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQ 545
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
E + + +M SG PD+ T T++L C++L +L +G Q+H +IK +V N
Sbjct: 546 EGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNG 605
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
+I MYA+CG+++ A F S DI+SW+S+I G A G +AL LF M +P+
Sbjct: 606 LIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPN 665
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
++T++G LSACS+ GLV++G + M+ ++ + P H++C+VDLL R G + EA
Sbjct: 666 EVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETF- 724
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
I+ G++ T W LL AC+ HNN+ + E +++L+P+NS ++L ++ S G
Sbjct: 725 --IQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAG 782
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
E+ ++ MK+ GV+K PG SWI++ D H+F S DSSHP+ R L+ + E+
Sbjct: 783 NWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQ----RNLIYTMLEELW 838
Query: 616 REILFDAY 623
++L D Y
Sbjct: 839 SQVLDDGY 846
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 187/416 (44%), Gaps = 22/416 (5%)
Query: 54 TYNTVIAGLMQSDNVQGAKEVFDGMEVRD----VVTWNSMISGYVCNGLIDEALRVFHGM 109
TY +++ ++ AK++ D + + ++ N MI+ Y G + +A +VF M
Sbjct: 161 TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTM 220
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
L +VVSW +I + + A + +M + +++ I L
Sbjct: 221 QLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGR 280
Query: 170 KMPAKDVQAW--------NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
++ A +++W N +I+ Y + G + A ++F ++ +DL SW +I G +
Sbjct: 281 QLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLG 340
Query: 222 RIDAAISYFKQMPETCEKTWNSII--------SVLIRNGLVKEAHSYLEKYPY-SNIASW 272
A+ F+ + N I S L+ K+ H K+ N+ +
Sbjct: 341 YRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAG 400
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
++ Y + G + SA F + D+ WN +I +N E + FF QM G +
Sbjct: 401 CSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLT 460
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD+ T+ S+L C L+ GRQIH+ +KI ++ TV N+++TMY +C ++ AL
Sbjct: 461 PDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNV 520
Query: 393 FSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
F + + +++SWN+I+ + L++ M + KPD IT +L C+
Sbjct: 521 FRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCA 576
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 173/371 (46%), Gaps = 25/371 (6%)
Query: 164 ARKLFDKMPAKDVQA----WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV- 218
A+K+ D + + Q N MI Y G + A +F M ++ SW +I+G
Sbjct: 178 AKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQ 237
Query: 219 NSRRIDAAISYFK-----QMPETCEKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIA 270
N + DA I Y + Q P+ + T+ S+I G L ++ H+++ K + +
Sbjct: 238 NGQANDAIIMYIQMTRSGQFPD--QLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHL 295
Query: 271 SWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
+ N ++ Y G++ A VF + T+D+ W MI G + E L F +
Sbjct: 296 TSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQ 355
Query: 330 GP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMITMYARCGNI 386
G P+ F SV + CS L L+ G+Q+H +K + RN F S + MYA+ G +
Sbjct: 356 GTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCS--LCDMYAKFGFL 413
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
SA + F + DI+SWN+II A +G A +A++ F +M PD IT++ +L C
Sbjct: 414 PSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTC 473
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
++QGR + F + + ++ + + + +A+N+ +I + VS
Sbjct: 474 GSPVRLNQGRQIHSYIVKIGFDKEITV-CNSLLTMYTKCSHLHDALNVFRDISRNANLVS 532
Query: 507 PTVWGALLGAC 517
W A+L AC
Sbjct: 533 ---WNAILSAC 540
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 192/445 (43%), Gaps = 40/445 (8%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+I+ A N+F ++P +D ++W MI GY + G+ A+ LF + + + N I G +
Sbjct: 309 GQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSV 368
Query: 64 QSD-----NVQGAKEVFDGMEV-----RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
S ++ K+V GM V R+V S+ Y G + A F + D
Sbjct: 369 FSACSSLLELEYGKQV-HGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPD 427
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM----GARDVASWTIMVNGLVREGRIVEARKLFD 169
+VSWN +I A + + A +F++M D ++ ++ R+ + R++
Sbjct: 428 IVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHS 487
Query: 170 KMPA----KDVQAWNLMIAGYLDNGCVGVAEDLFQKM-HDRDLTSWKQLINGLVNSRRID 224
+ K++ N ++ Y + A ++F+ + + +L SW +++ + ++
Sbjct: 488 YIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEG 547
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRN-------GLVKEAHSY-LEKYPYSNIASWTNVI 276
+K+M + K + I+ L+ G+ + H Y ++ +++ +I
Sbjct: 548 ETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLI 607
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + A VF+ D+ W+ +I G + LG E L F M G P+
Sbjct: 608 DMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEV 667
Query: 337 TFTSVLTICSDLPTLDLGRQIHA-----QAIKIARNQFTTVSNAMITMYARCGNIQSA-- 389
T+ L+ CS + ++ G +++ I R F+ + + + AR G + A
Sbjct: 668 TYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCI----VDLLARAGCLHEAET 723
Query: 390 LLEFSSVPIHDIISWNSIICGLAYH 414
++ S + DI +W +++ H
Sbjct: 724 FIQKSGLDA-DITAWKTLLAACKTH 747
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 108/218 (49%), Gaps = 5/218 (2%)
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
++++ + +IF ++ E F +K S + +T+TS++ C++ +LD ++
Sbjct: 121 SKELPTNSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKK 180
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
IH +K + N MI MY +CG+++ A F ++ + +++SW S+I G + +G
Sbjct: 181 IHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQ 240
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
A A+ ++ +M + PD +TF V+ AC AG +D GR + +F ++
Sbjct: 241 ANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQ-N 299
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
++ + FG I+ A N+ I + WG ++
Sbjct: 300 ALISMYTNFGQIEHASNVFTRIPTKDL----ISWGTMI 333
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 189/641 (29%), Positives = 319/641 (49%), Gaps = 41/641 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM------FTYNTVI 59
I EA +F+ + + ++ M++GY KN L+ A+ +M D+ FTY +
Sbjct: 97 INEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKV 156
Query: 60 AG----LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
G L + + G ++ +V +++ Y ID+A ++F MP +D+V
Sbjct: 157 CGDNADLKRGKEIHG--QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLV 214
Query: 116 SWNLVIGALVNC----QRMDLAESYFKEMGARDVASWTIMVN-----GLVREGRIVEARK 166
SWN +I + ++L E D + ++ GL+ G+ +
Sbjct: 215 SWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYA 274
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ AK V + Y G V A +F M + + SW +++G V + + A
Sbjct: 275 IRAGF-AKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKA 333
Query: 227 ISYFKQM-PETCEKTWNSIISVL--------IRNGLVKEAHSYLEKYPY-SNIASWTNVI 276
I+ F++M E + T +I+ L + G K H ++++ S+I+ ++I
Sbjct: 334 IAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG--KFVHKFVDQLNLGSDISVMNSLI 391
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + V A +F + R WN MI G +N E L F +MK G PD+
Sbjct: 392 SMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSF 451
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T SV+ ++L + IH I+ ++ V+ A++ MY++CG I A F +
Sbjct: 452 TMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMI 511
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+I+WN++I G HG AL+LF++M+ +P+DIT++ V+SACS++GLVD+G
Sbjct: 512 SDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGL 571
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP--TVWGALL 514
+F MK Y L+P HY +VDLLGR G I EA + + + + +SP TV+GA+L
Sbjct: 572 RHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFI-----ENMPISPGITVYGAML 626
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
GAC+IH NI+VGE A +++ EL P+ G +++L +Y S + + M++ G+KK
Sbjct: 627 GACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKK 686
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
PGCS +++ + H F SG ++HP+ R+ L L EI+
Sbjct: 687 TPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIK 727
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 160/367 (43%), Gaps = 57/367 (15%)
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
T K + II ++I+NGL E H + T ++ + + G + A +VFE +
Sbjct: 60 TSMKELHQIIPLVIKNGLYNE-HLF-----------QTKLVSLFSKYGSINEAARVFEPI 107
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+ +++ M+ G +N E L F +M+ P FT +L +C D L G+
Sbjct: 108 DDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGK 167
Query: 356 QIHAQAI--KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
+IH Q I A N F ++ MYA+C I A F +P D++SWN+II G +
Sbjct: 168 EIHGQLITNSFAANVFAMT--GVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQ 225
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL---------------------- 451
+G+A+KALEL RM+ +PD IT V VL A + GL
Sbjct: 226 NGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNI 285
Query: 452 -------------VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
V+ R FD M K + + ++D + G ++A+ + ++
Sbjct: 286 STALADMYSKCGSVETARLIFDGMDQKTVVS-----WNSMMDGYVQNGEPEKAIAVFEKM 340
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGRR 557
+GI+ + L AC +++ G+ + V +L ++ V L MY C R
Sbjct: 341 LEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRV 400
Query: 558 EDAKRIF 564
+ A IF
Sbjct: 401 DIASDIF 407
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 143/374 (38%), Gaps = 121/374 (32%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIA 60
+I +A +FD+MP+RD V+WN +I G+ +NGF A+ L +M + D T TV+
Sbjct: 197 QIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLP 256
Query: 61 G------LMQSDNVQG-----------------------------AKEVFDGMEVRDVVT 85
LM ++ G A+ +FDGM+ + VV+
Sbjct: 257 AAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVS 316
Query: 86 WNSMISGYVCNGLIDEALRVFHGM------PL---------------------------- 111
WNSM+ GYV NG ++A+ VF M P
Sbjct: 317 WNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVD 376
Query: 112 -----KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARK 166
D+ N +I C+R+D+A F + R SW M+ G + GR+ EA
Sbjct: 377 QLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALN 436
Query: 167 LFDKM----------------PA-----------------------KDVQAWNLMIAGYL 187
F +M PA K++ ++ Y
Sbjct: 437 CFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYS 496
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNS 243
G + +A LF + DR + +W +I+G AA+ F +M E + T+ S
Sbjct: 497 KCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLS 556
Query: 244 IISVLIRNGLVKEA 257
+IS +GLV E
Sbjct: 557 VISACSHSGLVDEG 570
>gi|297844244|ref|XP_002890003.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335845|gb|EFH66262.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 471
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 242/422 (57%), Gaps = 9/422 (2%)
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A +F +M ++++ W +ING + ++ + +A YF PE WN++++ I G +
Sbjct: 44 ANKVFCEMVEKNVVIWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMVAGYIEMGNM 103
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
EA S ++ P ++ SW V+ GY +G++ + +VF+ M R+V WN +I G +N
Sbjct: 104 MEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDEMLERNVFSWNGLIKGYAQNG 163
Query: 315 LGEEGLKFFVQMKESGPS-PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF-TTV 372
E L F +M + G P++AT T VL+ C+ L D G+++H + N+ V
Sbjct: 164 RVSEVLGSFKRMVDEGSVFPNDATLTLVLSACAKLGAFDFGKRVHKYGENLGYNKVDVNV 223
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
NA+I MY +CG I+ A+ F + D+ISWN++I GLA HG+ +AL+LF M+
Sbjct: 224 KNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALDLFHEMKNCGI 283
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
PD +TFVGVL AC + GLV+ G YF+ M + + P+ H CVVDLL R G + +A+
Sbjct: 284 SPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSITPQIEHCGCVVDLLSRAGFLTQAV 343
Query: 493 NLLNE--IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
+N+ ++AD + +W LLGA +++ + GE+A + +++LEP N +++L+ +
Sbjct: 344 EFINKMPVKADAV-----IWATLLGASKVYKKVDTGELALKELIKLEPRNPANFVMLSNI 398
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
Y GR +DA R+ M++ G KKE G SWI+ +DG F S HP+ L+ +L L
Sbjct: 399 YGDAGRFDDAARLKVAMRDTGFKKEAGISWIETDDGLVKFYSSGEKHPRTEELQRILGEL 458
Query: 611 HT 612
+
Sbjct: 459 KS 460
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 196/445 (44%), Gaps = 78/445 (17%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRM 130
A +VF M ++VV W SMI+GY+ N KD+VS
Sbjct: 44 ANKVFCEMVEKNVVIWTSMINGYLLN---------------KDLVS-------------- 74
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
A YF RD+ W MV G + G ++EAR LFD+MP +DV +WN ++ GY + G
Sbjct: 75 --ARRYFDLSPERDIVLWNTMVAGYIEMGNMMEARSLFDQMPCRDVMSWNTVLEGYANIG 132
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSII 245
+ E +F +M +R++ SW LI G + R+ + FK+M + + T ++
Sbjct: 133 DMEACERVFDEMLERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVFPNDATLTLVL 192
Query: 246 SVLIRNGLV---KEAHSYLEKYPYSNI-ASWTNVIVG-YFEMGEVGSAIKVFELMTTRDV 300
S + G K H Y E Y+ + + N ++ Y + G + A++VF+ + RD+
Sbjct: 193 SACAKLGAFDFGKRVHKYGENLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDL 252
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
WN MI GL + G E L F +MK G SPD TF VL C + ++ G
Sbjct: 253 ISWNTMINGLAAHGHGTEALDLFHEMKNCGISPDKVTFVGVLCACKHMGLVEDG------ 306
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
N+M T +FS P I ++ L+ G+ +A
Sbjct: 307 ---------LAYFNSMFT-------------DFSITP--QIEHCGCVVDLLSRAGFLTQA 342
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS-AHYTCVV 479
+E +M + K D + + +L A VD G +K L+PR+ A++ +
Sbjct: 343 VEFINKMPV---KADAVIWATLLGASKVYKKVDTGEL---ALKELIKLEPRNPANFVMLS 396
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIE 504
++ G G D+A L +R G +
Sbjct: 397 NIYGDAGRFDDAARLKVAMRDTGFK 421
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 136/284 (47%), Gaps = 23/284 (8%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
N + A+ FD P+RD V WN M+ GY + G + A LF+QMP RD+ ++NTV+ G
Sbjct: 69 NKDLVSARRYFDLSPERDIVLWNTMVAGYIEMGNMMEARSLFDQMPCRDVMSWNTVLEGY 128
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSW 117
+++ + VFD M R+V +WN +I GY NG + E L F G + +
Sbjct: 129 ANIGDMEACERVFDEMLERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVFPNDATL 188
Query: 118 NLVIGALVNCQRMDLAE---SYFKEMGAR--DVASWTIMVNGLVREGRIVEARKLFDKMP 172
LV+ A D + Y + +G DV +++ + G I A ++F +
Sbjct: 189 TLVLSACAKLGAFDFGKRVHKYGENLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK 248
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR----IDAAIS 228
+D+ +WN MI G +G A DLF +M + ++ K G++ + + ++ ++
Sbjct: 249 RRDLISWNTMINGLAAHGHGTEALDLFHEMKNCGISPDKVTFVGVLCACKHMGLVEDGLA 308
Query: 229 YFKQM-------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
YF M P+ + ++ +L R G + +A ++ K P
Sbjct: 309 YFNSMFTDFSITPQI--EHCGCVVDLLSRAGFLTQAVEFINKMP 350
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 173/384 (45%), Gaps = 40/384 (10%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A +F +M +++ V W MI GY N L +A F+ PERD+ +NT++AG ++ N+
Sbjct: 44 ANKVFCEMVEKNVVIWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMVAGYIEMGNM 103
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQ 128
A+ +FD M RDV++WN+++ GY G ++ RVF M ++V SWN +I
Sbjct: 104 MEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDEMLERNVFSWNGLIKGYAQNG 163
Query: 129 RMDLAESYFKEMGAR-----DVASWTIMVNGLVREGRIVEARKL--------FDKMPAKD 175
R+ FK M + A+ T++++ + G +++ ++K+ D
Sbjct: 164 RVSEVLGSFKRMVDEGSVFPNDATLTLVLSACAKLGAFDFGKRVHKYGENLGYNKV---D 220
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
V N +I Y G + +A ++F+ + RDL SW +INGL A+ F +M +
Sbjct: 221 VNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALDLFHEM-K 279
Query: 236 TC-----EKTWNSIISVLIRNGLVKEAHSYLEKY-----PYSNIASWTNVIVGYFEMGEV 285
C + T+ ++ GLV++ +Y I V+ G +
Sbjct: 280 NCGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSITPQIEHCGCVVDLLSRAGFL 339
Query: 286 GSAIKVFELMTTR-DVTVWNVMIFG---LGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
A++ M + D +W ++ + D GE LK ++++ P A F +
Sbjct: 340 TQAVEFINKMPVKADAVIWATLLGASKVYKKVDTGELALKELIKLEPRNP----ANFVML 395
Query: 342 LTICSDLPTLDLGRQIHAQAIKIA 365
I D GR A +K+A
Sbjct: 396 SNIYG-----DAGRFDDAARLKVA 414
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 181/667 (27%), Positives = 314/667 (47%), Gaps = 74/667 (11%)
Query: 20 DTVTW--NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
D +T+ N+ +R +G L A +F+QMP +++F+ N +++ S ++ A+ +F
Sbjct: 254 DVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLS 313
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN---CQRMDLAE 134
R+ TW M+ + G +AL +F M + V+ + + ++N C L
Sbjct: 314 SPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHP 373
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
K V +++ + G + AR++F +M KD +N M+ G G
Sbjct: 374 FAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQ 433
Query: 195 AEDLFQKM----------------HDRDLTSWKQLINGLVNSRRIDAAIS---------Y 229
A LF M H R ++ ++N VN+ +D
Sbjct: 434 ALQLFAAMRRAGYSRHPLHLLQYSHSRSRST--SVLNVFVNNSLLDFYSKCDCLDDMRRL 491
Query: 230 FKQMPETCEKTWNSIISVLIRNG-------LVKEAHSY---LEKYPYSNI----ASWTNV 275
F +MPE ++N II+ N L +E + PY+ + S +V
Sbjct: 492 FDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDV 551
Query: 276 IVG-------------------------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
+G Y + G + +A F + + W +I G
Sbjct: 552 HIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGY 611
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+N EE L+ F M+ +G PD ATF+S++ S L + LGRQ+H+ I+
Sbjct: 612 VQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSV 671
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
+ ++ MYA+CG + AL F +P + ISWN++I A++G A+ A+++FE M
Sbjct: 672 FSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHC 731
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
F PD +TF+ VL+ACS+ GL D+ YF MK++Y + P HY CV+D LGR G +
Sbjct: 732 GFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQ 791
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
+L E+ + P +W ++L +CRIH N ++ +A +++ +EP ++ Y+IL+ +
Sbjct: 792 VQKMLVEM---PFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNI 848
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
Y G+ EDA + M++ GV+KE G SW++I + F S D + P ++ L+ L
Sbjct: 849 YARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRL 908
Query: 611 HTEIERE 617
+ E++++
Sbjct: 909 YKEMDKQ 915
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 157/363 (43%), Gaps = 64/363 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT---- 57
+ + + LFD+MP+RD V++NV+I Y N + LF +M +R + Y T
Sbjct: 485 LDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSV 544
Query: 58 -----------------VIAGLMQSD--------------NVQGAKEVFDGMEVRDVVTW 86
V+ GL D + AK F + ++W
Sbjct: 545 AGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISW 604
Query: 87 NSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLA---ESYFKE 139
++I+GYV NG +EAL++F M D +++ +I A + + L SY
Sbjct: 605 TALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIR 664
Query: 140 MGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
G + V S +++V+ + G + EA + FD+MP ++ +WN +I+ Y G A +
Sbjct: 665 SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKM 724
Query: 199 FQKM----HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSIISVLI 249
F+ M + D ++ ++ ++ D + YF M ++ + +I L
Sbjct: 725 FEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLG 784
Query: 250 RNGLVKEAHSYLEKYPY-SNIASWTNV-----IVGYFEMGEVGSAIKVFELMTTRDVTVW 303
R G + L + P+ ++ WT++ I G E+ V +A K+F + T D T +
Sbjct: 785 RVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARV-AADKLFGMEPT-DATPY 842
Query: 304 NVM 306
++
Sbjct: 843 VIL 845
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 202/678 (29%), Positives = 320/678 (47%), Gaps = 89/678 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM--------PER--- 50
R A I A LF + P R WN ++R Y G + LF QM ER
Sbjct: 183 RYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDN 242
Query: 51 ---------------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDG 77
DMF + +I + + A +VF
Sbjct: 243 YSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFME 302
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI-----GALVNCQRMDL 132
DVV W S+ISGY +G + AL F M + + VS + V A L
Sbjct: 303 YPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKL 362
Query: 133 AESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLD 188
S + + + + + N L+ + G I A LF +M KD+ +W+ M+A Y D
Sbjct: 363 GRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYAD 422
Query: 189 NGCVGVAEDLFQKMHDRDL-TSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
NG DLF +M D+ + +W +++ L R A IS ++
Sbjct: 423 NGAETDVLDLFNEMLDKRIKPNWVTVVSVL----RACACISNLEE--------------- 463
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVM 306
G+ + H Y + + + ++ Y + A+ +F M +DV W V+
Sbjct: 464 ----GM--KIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVL 517
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--I 364
G +N + E + F M SG PD +LT S+L L +HA IK
Sbjct: 518 FSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGF 577
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
NQF + ++I +YA+C +I+ A F + D+++W+SII +HG E+AL+LF
Sbjct: 578 ENNQF--IGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLF 635
Query: 425 ERM-RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
+M +D KP+++TF+ +LSACS++GL+ +G FD M NKY L+P S HY +VDLLG
Sbjct: 636 YQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLG 695
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGV 543
R G +D A++++N + ++ P +WGALLGACRIH NIK+GE+A + + L+PN++G
Sbjct: 696 RMGELDMALDVINNM---PMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGY 752
Query: 544 YLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL 603
Y++L+ +Y A ++ +KE + K G S +++ + F++GD H + +
Sbjct: 753 YILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHI 812
Query: 604 RYLLNLLHTEIEREILFD 621
+L LH ++ RE+ FD
Sbjct: 813 YEILTKLHAKM-REVAFD 829
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 138/342 (40%), Gaps = 47/342 (13%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP- 331
T + V Y + A K+F+ R V +WN ++ E L F QM
Sbjct: 175 TKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSV 234
Query: 332 ----SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
PDN + + L C+ L L LG+ IH K+ + V +A+I +Y +CG +
Sbjct: 235 SIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMN 294
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD-FKPDDITFVGVLSAC 446
A+ F P D++ W SII G G E AL F RM +++ PD +T V V SAC
Sbjct: 295 DAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASAC 354
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI--- 503
+ GR +K K L + ++ L G+ G I A NL E+ I
Sbjct: 355 AQLSNFKLGRSVHGFVKRK-GLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISW 413
Query: 504 --------------------------EVSPTVW---GALLGACRIHNNI----KVGEIAG 530
+ P W ++L AC +N+ K+ E+A
Sbjct: 414 STMVACYADNGAETDVLDLFNEMLDKRIKPN-WVTVVSVLRACACISNLEEGMKIHELAV 472
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
E+E + V L +MY+ C E A +F +M + V
Sbjct: 473 NYGFEME---TTVSTALMDMYMKCFSPEKAVDLFNRMPKKDV 511
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 11/114 (9%)
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
T CS L Q+H+Q +K + + + +YAR +I A F P +
Sbjct: 148 TCCSKLSI----SQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVY 203
Query: 403 SWNSIICGLAYHGYAEKALELFERMR-----LTDFKPDDITFVGVLSACSYAGL 451
WN+++ + G + L LF +M + +PD+ + L +C AGL
Sbjct: 204 LWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSC--AGL 255
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 190/667 (28%), Positives = 324/667 (48%), Gaps = 82/667 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
R + A+ +FD+MP RD V+WN +I GY +G+ + A+ +++++ D FT ++
Sbjct: 153 RMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSS 212
Query: 58 VI---AGLMQSDNVQG--------------------------------AKEVFDGMEVRD 82
V+ A L+ QG A+ VFD M VRD
Sbjct: 213 VLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRD 272
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN----LVIGALVNCQRMDLAESYFK 138
VT+N+MI GY+ +++E++++F L+++ + V L C +
Sbjct: 273 SVTYNTMICGYLKLEMVEESVKMF----LENLDQFKPDILTVTSVLCACGHL-------- 320
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
RD++ + N ++R G ++E+ N++I Y G + A D+
Sbjct: 321 ----RDLSLAKYIYNYMLRAGFVLES------------TVKNILIDVYAKCGDMITARDV 364
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLV 254
F M +D SW +I+G + S + A+ FK M E+ T+ +IS+ R +
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADL 424
Query: 255 KEA---HSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
K HS ++ Y +++ +I Y + GEVG ++K+F M T D WN +I
Sbjct: 425 KFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISAC 484
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
GL+ QM+++ PD ATF L +C+ L LG++IH ++
Sbjct: 485 VRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL 544
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
+ NA+I MY++CG ++S+ F + D+++W +I +G EKALE F M +
Sbjct: 545 QIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKS 604
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
PD + F+ ++ ACS++GLV++G F+ MK Y + P HY CVVDLL R I +
Sbjct: 605 GIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK 664
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
A I+A IE ++W ++L ACR +++ E R++EL P++ G ++ +
Sbjct: 665 AEEF---IQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNA 721
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
Y + + + I +++ +KK PG SWI+I HVF SGD S P+ + L +L
Sbjct: 722 YAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEIL 781
Query: 611 HTEIERE 617
++ + +E
Sbjct: 782 YSLMAKE 788
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 223/506 (44%), Gaps = 88/506 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQ-----MPE------ 49
++ +R +A+ +FD+M RD+VT+N MI GY K ++ ++ +F + P+
Sbjct: 253 LKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFKPDILTVTS 312
Query: 50 --------RDM----FTYNTVI-AGLMQSDNVQG--------------AKEVFDGMEVRD 82
RD+ + YN ++ AG + V+ A++VF+ ME +D
Sbjct: 313 VLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKD 372
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESY-- 136
V+WNS+ISGY+ +G + EA+++F M + D +++ ++I + +
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHS 432
Query: 137 --FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
K D++ +++ + G + ++ K+F+ M D WN +I+ + G
Sbjct: 433 NGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFG---- 488
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
D + Q+ + ++ + ++ +P + + L L
Sbjct: 489 -----------DFATGLQVTTQMRKNKVVPDMATFLVTLP---------MCASLAAKRLG 528
Query: 255 KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
KE H L ++ Y + N ++ Y + G + S+ +VFE M+ RDV W MI+ G
Sbjct: 529 KEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMY 588
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
GE+ L+ FV M++SG PD+ F +++ CS ++ G + + +
Sbjct: 589 GEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEK----MKTHYKI-- 642
Query: 374 NAMITMYA-------RCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFE 425
+ MI YA R I A ++PI D W S++ G E A E
Sbjct: 643 DPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETA-ERVS 701
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGL 451
R R+ + PDD + +L++ +YA L
Sbjct: 702 R-RIIELNPDDPGY-SILASNAYAAL 725
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 99/172 (57%), Gaps = 1/172 (0%)
Query: 286 GSAIKVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
S++ VF ++ ++V +WN +I +N + L+F+ +++ES SPD TF SV+
Sbjct: 56 ASSLSVFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKA 115
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
C+ L ++G ++ Q +++ V NA++ MY+R G + A F +P+ D++SW
Sbjct: 116 CAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSW 175
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
NS+I G + HGY E+ALE++ +R + PD T VL A + +V QG+
Sbjct: 176 NSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQ 227
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 184/428 (42%), Gaps = 57/428 (13%)
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
PAK+V WN +I + NG A + + K+ + ++ K F
Sbjct: 67 PAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYT----------------FP 110
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
+ + C +++ + L+ + LE S++ ++ Y MG + A +V
Sbjct: 111 SVIKACAGLFDAEMGDLVYKQI-------LEMGFESDLYVGNALVDMYSRMGLLSRARQV 163
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F+ M RD+ WN +I G + EE L+ + +++ S PD+ T +SVL ++L +
Sbjct: 164 FDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVV 223
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
G+ +H +K N + V+N ++ MY + A F + + D +++N++ICG
Sbjct: 224 KQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGY 283
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
E+++++F L FKPD +T VL AC + + +Y ++ M F+
Sbjct: 284 LKLEMVEESVKMFLE-NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLES 342
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRA-DGIEVSPTVWGA-----LLGACRIHNNIKV 525
+ ++D+ + G + A ++ N + D + + + G L+ A ++ + +
Sbjct: 343 TVK-NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 526 GEIAGERVME------------------LEPN--NSGVYLILT------EMYLSCGRRED 559
E + + L N SG+Y+ L+ +MY CG D
Sbjct: 402 MEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGD 461
Query: 560 AKRIFAQM 567
+ +IF M
Sbjct: 462 SLKIFNSM 469
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 189/667 (28%), Positives = 320/667 (47%), Gaps = 72/667 (10%)
Query: 8 EAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFT-YNTVIAGLMQ 64
+A+++F+ M QR+ V+WN MI Y +NG A+ L+ +M + + T + T ++ L
Sbjct: 60 DARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGA 119
Query: 65 SDNVQGAKEV-----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
++ +E+ + G++ + N++++ Y G + +A R+F + +D SWN
Sbjct: 120 CSSLAQGREIHNRVFYSGLDSFQSLA-NALVTMYARFGSVGDAKRMFQSLQTRDETSWNA 178
Query: 120 VIGALVNCQRMDLAESYFKEMGA------------------------------------- 142
VI A A FKEM
Sbjct: 179 VILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238
Query: 143 -RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
D+ T ++N + G EAR++FDKM +D+ +WN+MI Y+ NG A +L+QK
Sbjct: 239 DSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQK 298
Query: 202 MHDRDLTSWKQL-------------INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL 248
+ D+ +K+ + L R + + I E T +++++
Sbjct: 299 L---DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVAT--ALVNMY 353
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMG---EVGSAIKVFELMTTRDVTVWNV 305
+ G ++EA + +W+ +I Y G + A KVF+ + +RD WN
Sbjct: 354 AKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNA 413
Query: 306 MIFGLGENDLGEEGLKFFVQMK-ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
MI +N +K F +M +G PD TF +VL C+ L L + +HAQ +
Sbjct: 414 MITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISES 473
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
V+N +I MYARCG+++ A F++ ++SW +++ + +G +AL+LF
Sbjct: 474 ELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLF 533
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
+ M L KPDD+T+ +L C++ G ++QG YF M + L P + H+ +VDLLGR
Sbjct: 534 QEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGR 593
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G + +A LL + E P W L ACRIH +++GE A ERV EL+P+++ Y
Sbjct: 594 SGRLFDAKELLESM---PFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPY 650
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
+ ++ +Y + G E + +M+E G+KK PG S+I+++ H F SG HP+ +
Sbjct: 651 IAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEIC 710
Query: 605 YLLNLLH 611
L LH
Sbjct: 711 EELTRLH 717
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 141/313 (45%), Gaps = 53/313 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++EA+ +F+ M RD V W+ +I Y NG+ +A
Sbjct: 359 LEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDA------------------------- 393
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP----LK-DVVSWNLV 120
+ A++VFD + RD + WN+MI+ YV NG A+++F M LK D V++ V
Sbjct: 394 ---RKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAV 450
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDV 176
+ A + R+ ++ ++ ++ S ++ N L+ R G + EA +LF K V
Sbjct: 451 LEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTV 510
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+W M+A + G A DLFQ+M D ++ ++ + ++ YF
Sbjct: 511 VSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTD 570
Query: 233 MPE-----TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIV-----GYFE 281
M E + +++ +L R+G + +A LE P+ + +W + G E
Sbjct: 571 MAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLE 630
Query: 282 MGEVGSAIKVFEL 294
+GE +A +V+EL
Sbjct: 631 LGE-AAAERVYEL 642
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 126/278 (45%), Gaps = 53/278 (19%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR-NQFTTVSNAMITMYARCGNIQSALL 391
PDN TF +VL CS + GR +H + I+ +R + T V NA+I+MY +C ++ A
Sbjct: 5 PDNVTFLTVLCSCSSCGDVAEGRALH-ERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 392 EFSSVP--IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F S+ +++SWN++I A +G++ +AL L+ RM L D +TFV VL ACS
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122
Query: 450 GLVDQGRYYFDCMKNKYF---LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
+ QGR + N+ F L + +V + RFG + +A + ++
Sbjct: 123 --LAQGRE----IHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTR----D 172
Query: 507 PTVWGALL----------GACRIHNNIK----------VGEIAGERVMELEPNNSGVY-- 544
T W A++ GA RI +K + I+G E+ P ++
Sbjct: 173 ETSWNAVILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAE 232
Query: 545 -------------LILTEMYLSCGRREDAKRIFAQMKE 569
L MY CG +A+ +F +MK+
Sbjct: 233 IVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKK 270
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/545 (32%), Positives = 286/545 (52%), Gaps = 53/545 (9%)
Query: 67 NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV------ 120
NV A+ VF + + N+M+ Y + + ALR + M K ++ N
Sbjct: 59 NVNYAELVFAQIHQPNSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLK 118
Query: 121 -IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKD 175
GA+ L + E R +VNGL+ R G AR +FD KD
Sbjct: 119 ACGAMCGLLEGGLVQG---EAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKD 175
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
+ +WN M+ GY+ G + A+++F +M +RD+ SW +I+G Y K+M E
Sbjct: 176 LVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDG------------YGKKMGE 223
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
V A + + P ++ SW ++I GY ++GE+ A ++F+ M
Sbjct: 224 ------------------VNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFDKM 265
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
++V W++MI G ++ +E L F QM G PD + ++ CS L LD GR
Sbjct: 266 LQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGR 325
Query: 356 QIHAQAIKIARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
IH + + RN+ V A++ MY +CG+ A F+S+P +++SWN +I GL
Sbjct: 326 WIH---LYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLG 382
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
+G+ ++ALE F +M + DD+ F+GVL ACS+A LV +G + F+ MK Y L+P+
Sbjct: 383 MNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKL 442
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
HY C+VDLLGR G +D+ N+ I++ ++ + +WG+LL ACRIH N+ + EI ER
Sbjct: 443 EHYGCLVDLLGRAGQLDQIQNI---IQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVER 499
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLS 592
+ EL+ ++SGVY++++ +Y G E RI MKE +KK+ G S I+++ F+S
Sbjct: 500 LAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVS 559
Query: 593 GDSSH 597
G+ SH
Sbjct: 560 GEKSH 564
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 141/473 (29%), Positives = 225/473 (47%), Gaps = 34/473 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ + A+ +F ++ Q ++ N M++ Y ++ + A+ + +M + D +TY
Sbjct: 56 KTLNVNYAELVFAQIHQPNSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPF 115
Query: 58 VI------AGLMQSDNVQG--AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
V+ GL++ VQG K F G DV N +IS Y G A VF G
Sbjct: 116 VLKACGAMCGLLEGGLVQGEAVKRGFGG----DVFVVNGLISMYCRCGETGWARAVFDGF 171
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE-GRIVEARKLF 168
KD+VSWN ++G V C M+ A++ F EM RDV SW+IM++G ++ G + AR F
Sbjct: 172 SEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFF 231
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
D MP +D+ +WN MI GY G + VA ++F KM +++ SW +I+G R A++
Sbjct: 232 DSMPTRDLVSWNSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALN 291
Query: 229 YFKQMPETCEKTWNSIISVL------IRNGLVKEA---HSYLEK-YPYSNIASWTNVIVG 278
F+QM C+ +SV+ + G + + H Y+++ +I T ++
Sbjct: 292 LFRQM--LCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDM 349
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G A ++F M R+V WNVMI GLG N G+E L+ F QM+ D+ F
Sbjct: 350 YLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLF 409
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVP 397
VL CS + G I Q + R + ++ + R G + S+P
Sbjct: 410 LGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMP 469
Query: 398 IH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
+ + W S++ H A + E RL + K DD + V VL + YA
Sbjct: 470 MKPNAALWGSLLLACRIHQNVTLAEIVVE--RLAELKADD-SGVYVLMSNIYA 519
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 205/674 (30%), Positives = 322/674 (47%), Gaps = 93/674 (13%)
Query: 8 EAQNLFDKMP---QRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVI 59
+A+ FD++P +RD VTWN MI + +NG A+ LF M P + T+ +V+
Sbjct: 194 DAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVL 253
Query: 60 -----AGLMQSDNVQ-------GA---KEVF----------------DGMEV-------- 80
AGL+ ++V+ GA +E F D EV
Sbjct: 254 DSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEE 313
Query: 81 --RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDL--AES 135
+VT ++MIS NG E+LR+F M L+ + + +++N C + + A +
Sbjct: 314 PSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATA 373
Query: 136 YFKEMG------ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
+ E RD T ++ R + AR FD + + DV +WN M A YL +
Sbjct: 374 FVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQH 433
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR--IDAAISYFKQMPETCEKTWNSIISV 247
A LF++M L+ G+ S I A + P+T I S+
Sbjct: 434 HRSREALVLFERM----------LLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSL 483
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT--RDVTVWNV 305
L GL + A + Y + G + A VFE ++ RD WN
Sbjct: 484 LEEAGL------------EGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNS 531
Query: 306 MIFGLGENDLGEEGLKFFVQMK-ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
M+ G + LG+E + F M+ E P+ TF +VL + ++ GR+IHA+ +
Sbjct: 532 MLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSN 591
Query: 365 ARNQFTTVSNAMITMYARCGNIQ--SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
T + NA++ MYA+CG++ A+ + SS D+I+W S+I G A +G AE+AL+
Sbjct: 592 GFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALK 651
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
LF M+ +P+ +TF+ L+AC++ G ++QG M + + P S H++C+VDLL
Sbjct: 652 LFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLL 711
Query: 483 GRFGLIDEAMNLLNEI-RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
GR G +DEA LL +AD I W ALL AC+ ++ GE ER+M+L+P +
Sbjct: 712 GRCGRLDEAEKLLERTSQADVI-----TWMALLDACKNSKELERGERCAERIMQLDPEVA 766
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFH 601
Y++L MY + GR +A I M + G++ +PGCS +++N H F +GD SHPK
Sbjct: 767 SSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSE 826
Query: 602 RLRYLLNLLHTEIE 615
+ L LH I+
Sbjct: 827 EIYLELERLHWSIK 840
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 134/553 (24%), Positives = 248/553 (44%), Gaps = 72/553 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNV-MIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVI 59
M + R +A LFD+M R + ++ G L + +Q+ +RD F N+V+
Sbjct: 120 MEHGRPDKAMELFDRMEVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRD-FEENSVL 178
Query: 60 AGLMQS-----DNVQGAKEVFDGM---EVRDVVTWNSMISGYVCNGLIDEALRVFH---- 107
+ S ++ AK+ FD + RDVVTWN+MIS ++ NG EAL++F
Sbjct: 179 GNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDR 238
Query: 108 -GMPLKDVVSWNLVIGALVNCQRMDLAES---YFKEMGA---RDVASWTIMVNGLVREGR 160
G P + V++ V+ + V + L + + + +GA R+ T +V+ + G
Sbjct: 239 DGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGS 298
Query: 161 IVEARKLF----DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
+ +A ++F D+ P+ + + MI+ NG W Q
Sbjct: 299 LDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNG-------------------WPQ---- 335
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL--VKEAHSYLEKYPYSNIASWTN 274
S R+ +F E + + +++SVL + V A +++ + +++ +
Sbjct: 336 --ESLRL-----FFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRD 388
Query: 275 VIVG------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
++G Y ++ A F+ + + DV WN M ++ E L F +M
Sbjct: 389 NVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLL 448
Query: 329 SGPSPDNATFTSVLTICSDLPTLD---LGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
G P ATF + LT C+ P +G++I + + T V+NA + MYA+CG+
Sbjct: 449 EGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGS 508
Query: 386 IQS--ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF-KPDDITFVGV 442
+ A+ E S D I+WNS++ +HG ++A ELF+ M KP+ +TFV V
Sbjct: 509 LADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAV 568
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
L A + + QGR + + F + + ++++ + G +D+A + ++ ++
Sbjct: 569 LDASTSRTSIAQGREIHARVVSNGF-ESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQ 627
Query: 503 IEVSPTVWGALLG 515
+V W +L+
Sbjct: 628 EDV--IAWTSLIA 638
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 128/536 (23%), Positives = 208/536 (38%), Gaps = 99/536 (18%)
Query: 145 VASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
V S T M+ + GR +A +LFD+M + + A ++ G + + ++
Sbjct: 109 VYSCTAMIRAWMEHGRPDKAMELFDRMEVRPNCHALIALVNACSCLGNLAAGRRIHSQIS 168
Query: 204 DRDLTSWKQLINGLVN-----SRRIDAAISYFKQMPETCEK---TWNSIISVLIRNGLVK 255
DRD L N L++ IDA F ++P ++ TWN++IS +RNG +
Sbjct: 169 DRDFEENSVLGNALISMYSKCGSLIDAK-QAFDRLPRASKRDVVTWNAMISAFLRNGSAR 227
Query: 256 EAHSYL-----EKYPYSNIASWTNV---------------------IVG----------- 278
EA + P N ++ +V IVG
Sbjct: 228 EALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRT 287
Query: 279 -----YFEMGEVGSAIKVF-----ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
Y ++G + A +VF E +T VT + MI +N +E L+ F M
Sbjct: 288 ALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTC-SAMISACWQNGWPQESLRLFFAMNL 346
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK-IARNQFTTVSNAMITMYARCGNIQ 387
G P T SVL CS L + QA++ ++ + + ++T YAR ++
Sbjct: 347 EGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLP 406
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
A F ++ D++SWN++ H + +AL LFERM L +P TF+ L+AC+
Sbjct: 407 RARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACA 466
Query: 448 Y-------------------AGLVDQG-------RYYFDCMK----NKYFLQPRSAHYTC 477
AGL Y C F + A C
Sbjct: 467 AYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDC 526
Query: 478 V-----VDLLGRFGLIDEAMNLLNEIRADG-IEVSPTVWGALLGACRIHNNIKVG-EIAG 530
+ + G GL EA L + A+ ++ + + A+L A +I G EI
Sbjct: 527 ITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHA 586
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
V +++ + L MY CG +DA+ IF + N +E +W + G
Sbjct: 587 RVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSN---QEDVIAWTSLIAG 639
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 126/258 (48%), Gaps = 26/258 (10%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN--VMIFGLGENDLGEEGLKFFVQMKESG 330
+++IV + + G + A E + R +V++ MI E+ ++ ++ F +M+
Sbjct: 84 SDLIVMHAKCGNLAEA----EALADRFASVYSCTAMIRAWMEHGRPDKAMELFDRME--- 136
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
P+ +++ CS L L GR+IH+Q + + + NA+I+MY++CG++ A
Sbjct: 137 VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 196
Query: 391 LEFSSVP---IHDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSAC 446
F +P D+++WN++I +G A +AL+LF M R P+ +TFV VL +C
Sbjct: 197 QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSC 256
Query: 447 SYAGLVD-------QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
AGL+ GR ++ + F++ T +VD G+ G +D+A +
Sbjct: 257 VEAGLLSLEDVRAIHGRIVGAGIEREAFVR------TALVDSYGKLGSLDDAWEVFLRKG 310
Query: 500 ADGIEVSPTVWGALLGAC 517
+ S A++ AC
Sbjct: 311 DEEPSTSLVTCSAMISAC 328
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 125/274 (45%), Gaps = 21/274 (7%)
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI--KIARN 367
LG DL + PS T+ +L C L L G+++HA + +I +
Sbjct: 22 LGVEDLTAAVSRIIADQGHCAPS----TYGCLLQACGRLRALKQGQRLHAHILSRRIDLH 77
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
+ +++ +I M+A+CGN+ A E + + S ++I HG +KA+ELF+RM
Sbjct: 78 NHSFLASDLIVMHAKCGNLAEA--EALADRFASVYSCTAMIRAWMEHGRPDKAMELFDRM 135
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
+ +P+ + +++ACS G + GR + ++ F + S ++ + + G
Sbjct: 136 ---EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDF-EENSVLGNALISMYSKCGS 191
Query: 488 IDEAMNLLNEI-RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE---PNNSGV 543
+ +A + + RA +V W A++ A + N + R M+ + P NS
Sbjct: 192 LIDAKQAFDRLPRASKRDV--VTWNAMISAF-LRNGSAREALQLFRDMDRDGAPPPNSVT 248
Query: 544 YLILTEMYLSCG--RREDAKRIFAQMKENGVKKE 575
++ + + + G ED + I ++ G+++E
Sbjct: 249 FVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIERE 282
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 168/458 (36%), Positives = 259/458 (56%), Gaps = 26/458 (5%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCE 238
N ++A Y G V ++ LF+ DRD+ SW +I+ S R A+++F+ M E E
Sbjct: 152 NALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVE 211
Query: 239 KTWNSIISVLI------RNGLVKEAHSYLEKYPYSNIASWTNVIVG------YFEMGEVG 286
+I SVL R + KE H+Y+ + N N VG Y +V
Sbjct: 212 LDGVTIASVLPACSHLERLDVGKEIHAYVLR----NNDLIENSFVGSALVDMYCNCRQVE 267
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTIC 345
S +VF+ + R + +WN MI G N L E+ L F++M K +G P+ T SV+ C
Sbjct: 268 SGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPAC 327
Query: 346 -SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
L + G++IHA AI+ TV +A++ MYA+CG + + F+ +P ++I+W
Sbjct: 328 VHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITW 387
Query: 405 NSIICGLAYHGYAEKALELFERM-----RLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
N +I HG E+ALELF+ M R + KP+++TF+ V +ACS++GL+ +G F
Sbjct: 388 NVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLF 447
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
MK+ + ++P S HY CVVDLLGR G ++EA L+N + A+ +V W +LLGACRI
Sbjct: 448 YRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVG--AWSSLLGACRI 505
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCS 579
H N+++GE+A + ++ LEPN + Y++L+ +Y S G A + M++ GVKKEPGCS
Sbjct: 506 HQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCS 565
Query: 580 WIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
WI+ D H F++GD SHP+ +L L L ++ +E
Sbjct: 566 WIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKE 603
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 204/482 (42%), Gaps = 95/482 (19%)
Query: 53 FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
FT N ++A + V +K +F+ RD+V+WN+MIS + + EAL F M L+
Sbjct: 149 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 208
Query: 113 ----DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREG--------R 160
D V+ V+ A + +R+D+ KE+ A + + ++ N V R
Sbjct: 209 GVELDGVTIASVLPACSHLERLDVG----KEIHAYVLRNNDLIENSFVGSALVDMYCNCR 264
Query: 161 IVEA-RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
VE+ R++FD + + ++ WN MI+GY NG A LF +M + GL+
Sbjct: 265 QVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIK---------VAGLLP 315
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY-LEKYPYSNIASWTNVIVG 278
+ A++ MP C + +I KE H+Y + S+I + ++
Sbjct: 316 NTTTMASV-----MP-ACVHSLAAIAK-------GKEIHAYAIRNMLASDITVGSALVDM 362
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESG----PSP 333
Y + G + + +VF M ++V WNV+I G + GEE L+ F M E+G P
Sbjct: 363 YAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKP 422
Query: 334 DNATFTSVLTICSDLPTLDLG-----RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
+ TF +V CS + G R H ++ + + V + + R G ++
Sbjct: 423 NEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACV----VDLLGRAGQLEE 478
Query: 389 ALLEFSSVPIH--DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
A +++P + +W+S++ H E +G ++A
Sbjct: 479 AYELVNTMPAEFDKVGAWSSLLGACRIHQNVE---------------------LGEVAA- 516
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPR-SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
KN L+P ++HY + ++ GL ++AM + +R G++
Sbjct: 517 ----------------KNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKK 560
Query: 506 SP 507
P
Sbjct: 561 EP 562
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 131/318 (41%), Gaps = 62/318 (19%)
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--------- 363
ND E + +++M SG PDN F +VL S L L G QIHA A+K
Sbjct: 71 NDF-REAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVT 129
Query: 364 --------------IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
I FT +NA++ MYA+ G + + F S D++SWN++I
Sbjct: 130 VANTLVNMYGKCGGIGDKTFT--NNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMIS 187
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR------------- 456
+ +AL F M L + D +T VL ACS+ +D G+
Sbjct: 188 SFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLI 247
Query: 457 -----------YYFDCMKNK-------YFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE- 497
Y +C + + + L R + ++ R GL ++A+ L E
Sbjct: 248 ENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEM 307
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVG---EIAGERVMELEPNNSGVYLILTEMYLSC 554
I+ G+ + T +++ AC +H+ + EI + + ++ V L +MY C
Sbjct: 308 IKVAGLLPNTTTMASVMPAC-VHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKC 366
Query: 555 GRREDAKRIFAQMKENGV 572
G ++R+F +M V
Sbjct: 367 GCLNLSRRVFNEMPNKNV 384
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 148/354 (41%), Gaps = 71/354 (20%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIA 60
R+ +++ LF+ RD V+WN MI + ++ A+ F M E D T +V+
Sbjct: 163 RVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLP 222
Query: 61 G-----------------LMQSD-------------------NVQGAKEVFDGMEVRDVV 84
L +D V+ + VFD + R +
Sbjct: 223 ACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIE 282
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMP-----LKDVVSWNLVIGALVN-----CQRMDLAE 134
WN+MISGY NGL ++AL +F M L + + V+ A V+ + ++
Sbjct: 283 LWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHA 342
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ M A D+ + +V+ + G + +R++F++MP K+V WN++I +G
Sbjct: 343 YAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEE 402
Query: 195 AEDLFQKM---------HDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKT 240
A +LF+ M + ++ + +S I ++ F +M E
Sbjct: 403 ALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDH 462
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYP--YSNIASWTNV-----IVGYFEMGEVGS 287
+ ++ +L R G ++EA+ + P + + +W+++ I E+GEV +
Sbjct: 463 YACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAA 516
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 191/642 (29%), Positives = 320/642 (49%), Gaps = 52/642 (8%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-----ERDMFTYNTVIAGLM 63
A+ FD + RD WN+MI GY + G+ + F+ + D T+ +V+
Sbjct: 105 ARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVL---- 160
Query: 64 QSDNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+ + V DG ++ DV S+I Y G + A +F MP +D
Sbjct: 161 -----KACRNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRD 215
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV-------NGLVREGRIVEARK 166
+ SWN +I CQ + E+ G R + S T++ G G + +
Sbjct: 216 MGSWNAMISGY--CQSGNAKEALTLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ + + ++ N +I Y + G + + +F +M+ RDL SW +I + + A
Sbjct: 274 IKHGLES-ELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRA 332
Query: 227 ISYFKQM------PETCEKTWNSIISVLIRNGLVKEAHSY----LEK-YPYSNIASWTNV 275
I F++M P+ T S+ S+L + G ++ S L K + +I V
Sbjct: 333 ILLFQEMRLSRIQPDCL--TLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP--SP 333
+V Y ++G V SA VF + +DV WN +I G +N E ++ + M+E G S
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISA 450
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+ T+ SVL CS L G ++H + +K V ++ MY +CG + AL F
Sbjct: 451 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLF 510
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+P + + WN++I +HG+ EKA+ LF+ M KPD ITFV +LSACS++GLVD
Sbjct: 511 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 570
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+G + F+ M+ Y + P HY C+VDL GR G ++ A+N I++ ++ ++WGAL
Sbjct: 571 EGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNF---IKSMPLQPDASIWGAL 627
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
L ACR+H N+ +G+IA E + E+EP + G +++L+ MY S G+ E I + G++
Sbjct: 628 LSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLR 687
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
K PG S +++++ VF +G+ +HP + + L LH +++
Sbjct: 688 KTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLK 729
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 211/468 (45%), Gaps = 47/468 (10%)
Query: 67 NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-----DVVSWNLVI 121
NV A+ FD + RDV WN MISGY G E +R F L D ++ V+
Sbjct: 101 NVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVL 160
Query: 122 GALVNCQRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
A N + + G DV +++ R G +V AR LFD+MP +D+ +WN
Sbjct: 161 KACRNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWN 220
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MI+GY +G A L + D + L++ + + +
Sbjct: 221 AMISGYCQSGNAKEALTLSDGLRAMDSVTVVSLLSACTEAGDFNRGV------------- 267
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
+I S I++GL E + +I Y E G + KVF+ M RD+
Sbjct: 268 --TIHSYSIKHGLESE------------LFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDL 313
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
WN +I N+ + F +M+ S PD T S+ +I S L + R + Q
Sbjct: 314 ISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSV--Q 371
Query: 361 AIKIARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
+ + F T+ NA++ MYA+ G + SA F+ +P D+ISWN+II G A +G+A
Sbjct: 372 GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFA 431
Query: 418 EKALELFERMRLT--DFKPDDITFVGVLSACSYAGLVDQG-RYYFDCMKNKYFLQPRSAH 474
+A+E++ M + + T+V VL ACS AG + QG + + +KN +L
Sbjct: 432 SEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVG- 490
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
T + D+ G+ G +D+A++L +I V+ W L+ H +
Sbjct: 491 -TSLADMYGKCGRLDDALSLFYQIP----RVNSVPWNTLIACHGFHGH 533
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/501 (22%), Positives = 209/501 (41%), Gaps = 93/501 (18%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------- 48
R + A+ LFD+MP RD +WN MI GY ++G A+ L + +
Sbjct: 197 RYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMDSVTVVSLLSA 256
Query: 49 ----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
E ++F N +I + +++ ++VFD M VRD+++W
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISW 316
Query: 87 NSMISGYVCNGLIDEALRVFHGM-------------PLKDVVSWNLVIGALVNCQRMDLA 133
NS+I Y N A+ +F M L ++S I A + Q L
Sbjct: 317 NSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLR 376
Query: 134 ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ +F E D+ +V + G + AR +F+ +P KDV +WN +I+GY NG
Sbjct: 377 KGWFLE----DITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFAS 432
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A +++ M + G +++ + TW S++ + G
Sbjct: 433 EAIEMYNIMEEE---------GGEISAN----------------QGTWVSVLPACSQAGA 467
Query: 254 VKEA---HSYLEKYP-YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
+++ H L K Y ++ T++ Y + G + A+ +F + + WN +I
Sbjct: 468 LRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIAC 527
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
G + GE+ + F +M + G PD+ TF ++L+ CS +D G ++ + +
Sbjct: 528 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGE----WCFEMMQTDY 583
Query: 370 TTVSN-----AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALEL 423
+ M+ +Y R G ++ AL S+P+ D W +++ HG + L
Sbjct: 584 GITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVD--LGK 641
Query: 424 FERMRLTDFKPDDITFVGVLS 444
L + +P+ + + +LS
Sbjct: 642 IASEHLFEVEPEHVGYHVLLS 662
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 192/434 (44%), Gaps = 70/434 (16%)
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK--QMPETCEKTWNS 243
YL N V +A F +H+RD+ +W +I+G + I F + + + +
Sbjct: 98 YLGN--VALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRT 155
Query: 244 IISVL-----IRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
SVL + +G + H K+ + ++ ++I Y G V +A +F+ M T
Sbjct: 156 FPSVLKACRNVTDG--NKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPT 213
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
RD+ WN MI G ++ +E L + + + D+ T S+L+ C++ + G I
Sbjct: 214 RDMGSWNAMISGYCQSGNAKEALT----LSDGLRAMDSVTVVSLLSACTEAGDFNRGVTI 269
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H+ +IK VSN +I +YA G+++ F + + D+ISWNSII +
Sbjct: 270 HSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329
Query: 418 EKALELFERMRLTDFKPDDITFV---------GVLSACS--------------------- 447
+A+ LF+ MRL+ +PD +T + G + AC
Sbjct: 330 LRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNA 389
Query: 448 ----YA--GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
YA GLVD R F+ + NK + + ++ + G EA+ + N + +
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPNKDVIS-----WNTIISGYAQNGFASEAIEMYNIMEEE 444
Query: 502 GIEVSPT--VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL------ILTEMYLS 553
G E+S W ++L AC ++ G R+++ +G+YL L +MY
Sbjct: 445 GGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLK-----NGLYLDVFVGTSLADMYGK 499
Query: 554 CGRREDAKRIFAQM 567
CGR +DA +F Q+
Sbjct: 500 CGRLDDALSLFYQI 513
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 9/221 (4%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF-VQMKESGPSPDNAT 337
Y +G V A F+ + RDV WN+MI G G E ++ F + M SG PD T
Sbjct: 96 YCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRT 155
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F SVL C ++ G +IH A+K V+ ++I +Y R G + +A + F +P
Sbjct: 156 FPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMP 212
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
D+ SWN++I G G A++AL L + +R D +T V +LSAC+ AG ++G
Sbjct: 213 TRDMGSWNAMISGYCQSGNAKEALTLSDGLRAM----DSVTVVSLLSACTEAGDFNRG-V 267
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
K+ L+ ++DL FG + + + + +
Sbjct: 268 TIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRM 308
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 8/160 (5%)
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
++ C++L + + +HA+ + Q +S ++ +Y GN+ A F +
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNR 115
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTD-FKPDDITFVGVLSACSYAGLVDQGRYY 458
D+ +WN +I G GY+ + + F L+ +PD TF VL AC + D + +
Sbjct: 116 DVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACR--NVTDGNKIH 173
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
C+ K+ ++ L R+G + A L +E+
Sbjct: 174 --CLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEM 211
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 181/584 (30%), Positives = 286/584 (48%), Gaps = 71/584 (12%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+ D+F ++ ++ + A +F M RD+V WN+M++GY +G+ A+
Sbjct: 42 QADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLS 101
Query: 109 MPLK---------DVVSWNLVI---GALVN-------CQRMDLAESYFKEMGARD-VASW 148
M ++ +V+ ++ GAL C R L + + D V
Sbjct: 102 MQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLG 161
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
T +++ + G ++ AR++FD MPA R+
Sbjct: 162 TALLDMYAKCGSLLYARRVFDAMPA-------------------------------RNEV 190
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPET--CEKTWNSIISVL--------IRNGLVKEAH 258
+W LI G V R+ A FK M C + SI S L +R G ++ H
Sbjct: 191 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMG--EQLH 248
Query: 259 SYLEKYP-YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ L K ++++ + +++ Y + G + AI +F+ M +D ++ ++ G +N E
Sbjct: 249 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 308
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E F +M+ PD AT S++ CS L L GR H I T++ NA+I
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 368
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
MYA+CG I + F+ +P DI+SWN++I G HG ++A LF M F PD +
Sbjct: 369 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 428
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
TF+ +LSACS++GLV +G+++F M + Y L PR HY C+VDLL R G +DEA +
Sbjct: 429 TFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 488
Query: 498 --IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
+RAD VW ALLGACR++ NI +G+ + EL P +G +++L+ +Y + G
Sbjct: 489 MPLRAD-----VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAG 543
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
R ++A + K G KK PGCSWI+IN H F+ GD SHP+
Sbjct: 544 RFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 587
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 172/386 (44%), Gaps = 43/386 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMC--LFNQMPERDMFTYNTV 58
++ A + +A ++F MP RD V WN M+ GY +G +A+ L QM + +
Sbjct: 56 VKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNAST 115
Query: 59 IAGLMQSDNVQGAKEVFDGMEVR--------------------DVVTWNSMISGYVCNGL 98
+ L+ QGA + G V V+ +++ Y G
Sbjct: 116 LVALLPLLAQQGA--LAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGS 173
Query: 99 IDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA--SWTIMVNGLV 156
+ A RVF MP ++ V+W+ +IG V C RM A FK M A+ + S T + + L
Sbjct: 174 LLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASAL- 232
Query: 157 REGRIVEARKLFDKMPA--------KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
R ++ ++ +++ A D+ A N +++ Y G + A LF +M +D
Sbjct: 233 RACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTV 292
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
S+ L++G V + R + A FK+M E T S+I ++
Sbjct: 293 SYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV 352
Query: 265 PYSNIASWTNV----IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+AS T++ I Y + G + + +VF +M +RD+ WN MI G G + LG+E
Sbjct: 353 IIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEAT 412
Query: 321 KFFVQMKESGPSPDNATFTSVLTICS 346
F++M G PD TF +L+ CS
Sbjct: 413 ALFLEMNNLGFPPDGVTFICLLSACS 438
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 152/327 (46%), Gaps = 60/327 (18%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM-FTYNTVIAGLMQS-- 65
A+ +FD MP R+ VTW+ +I G+ + A LF M + + F T IA +++
Sbjct: 177 ARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACA 236
Query: 66 --DNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
D+++ +++ G+ D+ NS++S Y GLID+A+ +F M +KD VS++
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHA-DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYS 295
Query: 119 LVIGALVNCQRMDLAESYFKEMGA-----------------------------------R 143
++ V R + A FK+M A R
Sbjct: 296 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 355
Query: 144 DVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
+AS T + N L+ + GRI +R++F+ MP++D+ +WN MIAGY +G A LF
Sbjct: 356 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALF 415
Query: 200 QKMHD----RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIR 250
+M++ D ++ L++ +S + +F M T + ++ +L R
Sbjct: 416 LEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR 475
Query: 251 NGLVKEAHSYLEKYPY-SNIASWTNVI 276
G + EA+ +++ P +++ W ++
Sbjct: 476 GGFLDEAYEFIQSMPLRADVRVWVALL 502
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
+P+N TF L CS L GR IH AI VS A++ MY +C + A
Sbjct: 7 APNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAH 66
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALE--LFERMRLTDFKPDDITFVGVLSACSYA 449
F+++P D+++WN+++ G A+HG A+ L +M++ +P+ T V +L +
Sbjct: 67 IFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQ 126
Query: 450 GLVDQG 455
G + QG
Sbjct: 127 GALAQG 132
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
+ RI ++ +F+ MP RD V+WN MI GY +G A LF +M D T+
Sbjct: 373 KCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC 432
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
+++ S V K F M +T + Y+C G +DEA MP
Sbjct: 433 LLSACSHSGLVIEGKHWFHVMGHGYGLT--PRMEHYICMVDLLSRGGFLDEAYEFIQSMP 490
Query: 111 LK-DVVSWNLVIGALVNCQRMDLAES---YFKEMGARDVASWTIMVNGLVREGRIVEARK 166
L+ DV W ++GA + +DL + +E+G ++ ++ N GR EA +
Sbjct: 491 LRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAE 550
Query: 167 L 167
+
Sbjct: 551 V 551
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 181/584 (30%), Positives = 286/584 (48%), Gaps = 71/584 (12%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+ D+F ++ ++ + A +F M RD+V WN+M++GY +G+ A+
Sbjct: 42 QADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLS 101
Query: 109 MPLK---------DVVSWNLVI---GALVN-------CQRMDLAESYFKEMGARD-VASW 148
M ++ +V+ ++ GAL C R L + + D V
Sbjct: 102 MQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLG 161
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
T +++ + G ++ AR++FD MPA R+
Sbjct: 162 TALLDMYAKCGSLLYARRVFDAMPA-------------------------------RNEV 190
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPET--CEKTWNSIISVL--------IRNGLVKEAH 258
+W LI G V R+ A FK M C + SI S L +R G ++ H
Sbjct: 191 TWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMG--EQLH 248
Query: 259 SYLEKYP-YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ L K ++++ + +++ Y + G + AI +F+ M +D ++ ++ G +N E
Sbjct: 249 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 308
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E F +M+ PD AT S++ CS L L GR H I T++ NA+I
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 368
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
MYA+CG I + F+ +P DI+SWN++I G HG ++A LF M F PD +
Sbjct: 369 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 428
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
TF+ +LSACS++GLV +G+++F M + Y L PR HY C+VDLL R G +DEA +
Sbjct: 429 TFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 488
Query: 498 --IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
+RAD VW ALLGACR++ NI +G+ + EL P +G +++L+ +Y + G
Sbjct: 489 MPLRAD-----VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAG 543
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
R ++A + K G KK PGCSWI+IN H F+ GD SHP+
Sbjct: 544 RFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 587
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 172/386 (44%), Gaps = 43/386 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMC--LFNQMPERDMFTYNTV 58
++ A + +A ++F MP RD V WN M+ GY +G +A+ L QM + +
Sbjct: 56 VKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNAST 115
Query: 59 IAGLMQSDNVQGAKEVFDGMEVR--------------------DVVTWNSMISGYVCNGL 98
+ L+ QGA + G V V+ +++ Y G
Sbjct: 116 LVALLPLLAQQGA--LAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGS 173
Query: 99 IDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA--SWTIMVNGLV 156
+ A RVF MP ++ V+W+ +IG V C RM A FK M A+ + S T + + L
Sbjct: 174 LLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASAL- 232
Query: 157 REGRIVEARKLFDKMPA--------KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
R ++ ++ +++ A D+ A N +++ Y G + A LF +M +D
Sbjct: 233 RACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTV 292
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
S+ L++G V + R + A FK+M E T S+I ++
Sbjct: 293 SYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV 352
Query: 265 PYSNIASWTNV----IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+AS T++ I Y + G + + +VF +M +RD+ WN MI G G + LG+E
Sbjct: 353 IIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEAT 412
Query: 321 KFFVQMKESGPSPDNATFTSVLTICS 346
F++M G PD TF +L+ CS
Sbjct: 413 ALFLEMNNLGFPPDGVTFICLLSACS 438
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 152/327 (46%), Gaps = 60/327 (18%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM-FTYNTVIAGLMQS-- 65
A+ +FD MP R+ VTW+ +I G+ + A LF M + + F T IA +++
Sbjct: 177 ARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACA 236
Query: 66 --DNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
D+++ +++ G+ D+ NS++S Y GLID+A+ +F M +KD VS++
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHA-DLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYS 295
Query: 119 LVIGALVNCQRMDLAESYFKEMGA-----------------------------------R 143
++ V R + A FK+M A R
Sbjct: 296 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 355
Query: 144 DVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
+AS T + N L+ + GRI +R++F+ MP++D+ +WN MIAGY +G A LF
Sbjct: 356 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALF 415
Query: 200 QKMHD----RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT-----WNSIISVLIR 250
+M++ D ++ L++ +S + +F M T + ++ +L R
Sbjct: 416 LEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR 475
Query: 251 NGLVKEAHSYLEKYPY-SNIASWTNVI 276
G + EA+ +++ P +++ W ++
Sbjct: 476 GGFLDEAYEFIQSMPLRADVRVWVALL 502
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
+P+N TF L CS L GR IH AI VS A++ MY +C + A
Sbjct: 7 APNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAH 66
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALE--LFERMRLTDFKPDDITFVGVLSACSYA 449
F+++P D+++WN+++ G A+HG A+ L +M++ +P+ T V +L +
Sbjct: 67 IFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQ 126
Query: 450 GLVDQG 455
G + QG
Sbjct: 127 GALAQG 132
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
+ RI ++ +F+ MP RD V+WN MI GY +G A LF +M D T+
Sbjct: 373 KCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC 432
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
+++ S V K F M +T + Y+C G +DEA MP
Sbjct: 433 LLSACSHSGLVIEGKHWFHVMGHGYGLT--PRMEHYICMVDLLSRGGFLDEAYEFIQSMP 490
Query: 111 LK-DVVSWNLVIGALVNCQRMDLAES---YFKEMGARDVASWTIMVNGLVREGRIVEARK 166
L+ DV W ++GA + +DL + +E+G ++ ++ N GR EA +
Sbjct: 491 LRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAE 550
Query: 167 L 167
+
Sbjct: 551 V 551
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 196/688 (28%), Positives = 317/688 (46%), Gaps = 132/688 (19%)
Query: 24 WNVMIRGYFKNGFLDNAMCL--FNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
+N I + + G L+NAM L Q E + TY +V+ G K + DG +V
Sbjct: 69 YNAKILHFCQLGDLENAMELVCMCQKSELETKTYGSVL------QLCAGLKSLTDGKKVH 122
Query: 82 DVVTWNS----------MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMD 131
++ NS ++S Y G + E RVF M K+V WN ++ D
Sbjct: 123 SIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG--D 180
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
ES + + IMV + R A +LFDK+ +DV +WN MI+GY+ NG
Sbjct: 181 FKES---------ICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGL 231
Query: 192 VGVAEDLFQKMH----DRDLTSWKQLINGLVNS-------------------RRI----- 223
++++M D DL + ++ G NS RRI
Sbjct: 232 TERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNT 291
Query: 224 -----------DAAISYFKQMPETCEKTWNSIISVLIRNGLV------------------ 254
D A+ F++M E +W S+I+ R+G
Sbjct: 292 LLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLD 351
Query: 255 --------------------KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFE 293
K+ H Y++ SN+ ++ Y + G + A VF
Sbjct: 352 VVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFS 411
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
M +D+ WN M+ L PD+ T +L C+ L L+
Sbjct: 412 TMVVKDIISWNTMVGEL---------------------KPDSRTMACILPACASLSALER 450
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
G++IH ++ + V+NA++ +Y +CG + A L F +P D++SW +I G
Sbjct: 451 GKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGM 510
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSA 473
HGY +A+ F MR +PD+++F+ +L ACS++GL++QG +F MKN + ++P+
Sbjct: 511 HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLE 570
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV 533
HY C+VDLL R G + +A + + I T+WGALL CRI+++I++ E ERV
Sbjct: 571 HYACMVDLLSRTGNLSKAYKFIETL---PIAPDATIWGALLCGCRIYHDIELAEKVAERV 627
Query: 534 MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSG 593
ELEP N+G Y++L +Y +RE+ KR+ ++ + G++K PGCSWI+I ++F+SG
Sbjct: 628 FELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSG 687
Query: 594 -DSSHPKFHRLRYLLNLLHTEIEREILF 620
+SSHP ++ LL + +++ E F
Sbjct: 688 NNSSHPHSKKIESLLKKMRRKMKEEGYF 715
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 136/527 (25%), Positives = 223/527 (42%), Gaps = 122/527 (23%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++E + +FD M +++ WN M+ Y K G ++CLF M E+ ++
Sbjct: 150 LKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG-----------IEG 198
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGAL 124
+ A E+FD + RDV++WNSMISGYV NGL + L ++ M + V +I L
Sbjct: 199 KRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 258
Query: 125 VNCQR--------------------------------------MDLAESYFKEMGARDVA 146
V C +D A F++MG R+V
Sbjct: 259 VGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 318
Query: 147 SWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI---------AGYLDNG------- 190
SWT M+ G R+G A L +M + V+ + I +G LDNG
Sbjct: 319 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 378
Query: 191 -----------CVGV------------AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
C + A +F M +D+ SW ++ L R A I
Sbjct: 379 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACI 438
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVG 286
+P + +S L R KE H Y+ + YS+ N +V Y + G +G
Sbjct: 439 -----LPAC------ASLSALERG---KEIHGYILRNGYSSDRHVANALVDLYVKCGVLG 484
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A +F+++ ++D+ W VMI G G + G E + F +M+++G PD +F S+L CS
Sbjct: 485 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 544
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLEFSSVPIH-D 400
L+ G + I +N F M+ + +R GN+ A ++PI D
Sbjct: 545 HSGLLEQGWRF----FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPD 600
Query: 401 IISWNSIICGLA-YHGYAEKALELFERM--RLTDFKPDDITFVGVLS 444
W +++CG YH +EL E++ R+ + +P++ + +L+
Sbjct: 601 ATIWGALLCGCRIYHD-----IELAEKVAERVFELEPENTGYYVLLA 642
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/638 (28%), Positives = 309/638 (48%), Gaps = 51/638 (7%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A N+ P D V + G K+G L +A+ LF++MP +++ + T I+G ++
Sbjct: 58 AVNVSHAAPPPDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRP 117
Query: 69 QGAKEVFDGMEVRDVVTWN---SMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
+ A +F M V + + H + ++ + + IG+ +
Sbjct: 118 EAAATMFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCL 177
Query: 126 -----NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ--- 177
C + AE F+ M A DV +T +V+ L R G + A + +M + +Q
Sbjct: 178 IELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNE 237
Query: 178 --------------------------------AWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
A +I Y G G A+ +F+ + +
Sbjct: 238 HTMTSMLAECPRGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESK 297
Query: 206 DLTSWKQLINGLVNSRRIDAAISYFKQM----PETCEKTWNSIISVLIRNGLVKEAH-SY 260
++ SW ++ + R+D A+ F +M + E ++ +S L ++ H S
Sbjct: 298 NVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSVCLGRQIHCSA 357
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+++ ++I ++ Y G V V + D+ W I +N E+ +
Sbjct: 358 IKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAV 417
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
+QM G +P++ F+S L+ C+DL L GRQ+H A+K+ + NA+I MY
Sbjct: 418 ALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMY 477
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
++CG I SA L F + HD++SWNS+I GLA HG A ALE F M +D++PDD TF+
Sbjct: 478 SKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFL 537
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
VL C++AGLV +G +F M ++Y L P +HY C++D+LGR G EA+ ++ +
Sbjct: 538 SVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENM-- 595
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
E +W LL +C++H N+ +G++A +++MEL +S Y++++ +Y DA
Sbjct: 596 -PFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDA 654
Query: 561 KRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+R+ +M E GVKK+ G SWI++ + + F++GD SHP
Sbjct: 655 ERVRRRMDEIGVKKDAGWSWIEVKNEVNTFVAGDMSHP 692
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/545 (32%), Positives = 285/545 (52%), Gaps = 53/545 (9%)
Query: 67 NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV------ 120
NV A+ VF + + N+M+ Y + + ALR + M K ++ N
Sbjct: 59 NVNYAELVFAQIHQPNSFICNTMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLK 118
Query: 121 -IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKD 175
GA+ L + E R +VNGL+ R G AR +FD KD
Sbjct: 119 ACGAMCGLLEGGLVQG---EAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKD 175
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
+ +WN M+ GY+ G + A+++F +M +RD+ SW +I+G Y K+M E
Sbjct: 176 LVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDG------------YGKKMGE 223
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
V A + + P ++ SW ++I GY ++GE+ A ++F+ M
Sbjct: 224 ------------------VNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFBKM 265
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
++V W++MI G + +E L F QM G PD + ++ CS L LD GR
Sbjct: 266 LQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGR 325
Query: 356 QIHAQAIKIARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
IH + + RN+ V A++ MY +CG+ A F+S+P +++SWN +I GL
Sbjct: 326 WIH---LYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLG 382
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
+G+ ++ALE F +M + DD+ F+GVL ACS+A LV +G + F+ MK Y L+P+
Sbjct: 383 MNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKL 442
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
HY C+VDLLGR G +D+ N+ I++ ++ + +WG+LL ACRIH N+ + EI ER
Sbjct: 443 EHYGCLVDLLGRAGQLDQIQNI---IQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVER 499
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLS 592
+ EL+ ++SGVY++++ +Y G E RI MKE +KK+ G S I+++ F+S
Sbjct: 500 LAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVS 559
Query: 593 GDSSH 597
G+ SH
Sbjct: 560 GEKSH 564
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 141/473 (29%), Positives = 225/473 (47%), Gaps = 34/473 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ + A+ +F ++ Q ++ N M++ Y ++ + A+ + +M ++ D +TY
Sbjct: 56 KTLNVNYAELVFAQIHQPNSFICNTMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPF 115
Query: 58 VI------AGLMQSDNVQG--AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
V+ GL++ VQG K F G DV N +IS Y G A VF G
Sbjct: 116 VLKACGAMCGLLEGGLVQGEAVKRGFGG----DVFVVNGLISMYCRCGETGWARAVFDGF 171
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE-GRIVEARKLF 168
KD+VSWN ++G V C M+ A++ F EM RDV SW+IM++G ++ G + AR F
Sbjct: 172 SEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFF 231
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
D MP +D+ +WN MI GY G + VA ++F KM +++ SW +I+G R A++
Sbjct: 232 DSMPTRDLVSWNSMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALN 291
Query: 229 YFKQMPETCEKTWNSIISVL------IRNGLVKEA---HSYLEK-YPYSNIASWTNVIVG 278
F+QM C+ +SV+ + G + + H Y+++ +I T ++
Sbjct: 292 LFRQM--LCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDM 349
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G A +F M R+V WNVMI GLG N G+E L+ F QM+ D+ F
Sbjct: 350 YLKCGSXDEARXIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLF 409
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVP 397
VL CS + G I Q + R + ++ + R G + S+P
Sbjct: 410 LGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMP 469
Query: 398 IH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
+ + W S++ H A + E RL + K DD + V VL + YA
Sbjct: 470 MKPNAALWGSLLLACRIHQNVTLAEIVVE--RLAELKADD-SGVYVLMSNIYA 519
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 184/649 (28%), Positives = 324/649 (49%), Gaps = 75/649 (11%)
Query: 16 MPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGLMQSD----- 66
MP R+TV++ +I+GY ++ LD + LF+++ E + F + T++ L+ +
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 67 ------------------------------NVQGAKEVFDGMEVRDVVTWNSMISGYVCN 96
+V A++ FD + +D+V+W M++ Y N
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 97 GLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESY----FKEMGARDVASW 148
++L++F M + + ++ V+ A + + + +S K D+
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
+++ + G + ++F++MP DV W+ MI+ Y + A +LF +M R
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMR-RAFV 239
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
Q F + ++C N L K+ H ++ K
Sbjct: 240 LPNQFT---------------FASVLQSCASIENL--------QLGKQVHCHVLKVGLDG 276
Query: 269 IASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
+N ++ Y + G + +++K+F + R+ WN MI G ++ G++ L + M
Sbjct: 277 NVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNML 336
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
E T++SVL C+ L ++LG QIH+ ++K ++ V NA+I MYA+CG+I+
Sbjct: 337 ECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIK 396
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
+A L F + D ISWN++I G + HG +AL+ F+ M+ T+ P+ +TFV +LSACS
Sbjct: 397 NARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACS 456
Query: 448 YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
AGL+D G+ YF M Y ++P HYTC+V LLGR G +D+A+ L+ EI +E +
Sbjct: 457 NAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEI---PLEPNV 513
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
VW ALLGAC IHN++ +G ++ +++++++P + +++L+ +Y R + M
Sbjct: 514 KVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFM 573
Query: 568 KENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
K GVKKEPG SWI+ H F GD+SHP + +L L+ + E+
Sbjct: 574 KNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEK 622
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 197/462 (42%), Gaps = 38/462 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
+ A+ FD + +D V+W M+ Y +N +++ LF +M + FT+ V+
Sbjct: 92 VNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKA 151
Query: 62 LMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+ + K V G ++ D+ ++ Y G ++ LRVF MP DV+
Sbjct: 152 CIGLEAFSVGKSV-HGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIP 210
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK-- 174
W+ +I + A F +M V +++ +E +L ++
Sbjct: 211 WSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVL 270
Query: 175 ------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+V N ++ Y G + + LF ++ +R+ +W +I G V S D A+S
Sbjct: 271 KVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALS 330
Query: 229 YFKQMPE----TCEKTWNSII---SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YF 280
+K M E E T++S++ + L L + HS K Y N ++ Y
Sbjct: 331 LYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYA 390
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G + +A VF++++ RD WN MI G + L E LK F M+E+ P+ TF S
Sbjct: 391 KCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVS 450
Query: 341 VLTICSDLPTLDLGRQ-----IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
+L+ CS+ LD+G+ + I+ +T M+ + R G++ A+
Sbjct: 451 ILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYT----CMVWLLGRSGHLDKAVKLIEE 506
Query: 396 VPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+P+ ++ W +++ H + L + ++ P D
Sbjct: 507 IPLEPNVKVWRALLGACVIHNDVD--LGIMSAQQILQIDPQD 546
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 51/234 (21%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE------------ 49
+ R+ + LF ++P R+ VTWN MI GY ++G D A+ L+ M E
Sbjct: 290 KCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSS 349
Query: 50 ---------------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
+D+ N +I + +++ A+ VFD + RD
Sbjct: 350 VLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERD 409
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL----VIGALVNCQRMDLAESYFK 138
++WN+MISGY +GL+ EAL+ F M + V L ++ A N +D+ ++YFK
Sbjct: 410 EISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFK 469
Query: 139 EMGARD------VASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAG 185
M +D + +T MV L R G + +A KL +++P + +V+ W ++
Sbjct: 470 SM-VQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGA 522
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 17/170 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAG 61
I+ A+ +FD + +RD ++WN MI GY +G + A+ F M E + T+ ++++
Sbjct: 395 IKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSA 454
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLK-D 113
+ + + F M V+D M Y C +G +D+A+++ +PL+ +
Sbjct: 455 CSNAGLLDIGQNYFKSM-VQDYGIEPCM-EHYTCMVWLLGRSGHLDKAVKLIEEIPLEPN 512
Query: 114 VVSWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVREGR 160
V W ++GA V +DL + ++ +D A+ ++ N R R
Sbjct: 513 VKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRR 562
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 191/646 (29%), Positives = 328/646 (50%), Gaps = 83/646 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVIA 60
+ + LF+K+ + D +NV+IRG+ NG +++ L+ + ++ D FTY I+
Sbjct: 62 VAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAIS 121
Query: 61 G-----------LMQSDNV------------------------QGAKEVFDGMEVRDVVT 85
L+ + ++ + A++VFD M RD V
Sbjct: 122 AASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVL 181
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV 145
WN+MISG+ N ++++RVF M L +S++ A V +L E Y MG + +
Sbjct: 182 WNTMISGFSRNSYFEDSIRVFVDM-LDVGLSFDSTTLATVLTAVAELQE-YRLGMGIQCL 239
Query: 146 ASW------TIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
AS ++ GL+ + G+ + R LFD++ D+ ++N MI+GY N A
Sbjct: 240 ASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESA 299
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
LF+++ L S ++ VNS + I + +P + I ++ ++ G++
Sbjct: 300 VTLFREL----LASGQR-----VNSSTLVGLIPVY--LPFNHLQLSRLIQNLSLKIGIIL 348
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
+ + T + Y + EV A ++F+ + + WN MI G +N L
Sbjct: 349 QP------------SVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGL 396
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA--QAIKIARNQFTTVS 373
+ + F +M SP+ T TS+L+ C+ L L +G+ +H ++ ++ N + VS
Sbjct: 397 TDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVY--VS 453
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
A++ MYA+CG+I A F + ++++WN++I G HG+ ++AL+LF M +
Sbjct: 454 TALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIP 513
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
P +TF+ +L ACS++GLV +G F M N Y QP S HY C+VD+LGR G + A+
Sbjct: 514 PTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALE 573
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
+ + +E P VWGALLGAC IH N ++ +A +R+ +L+P N G Y++L+ +Y +
Sbjct: 574 FIERM---PLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYST 630
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
A + +K+ + K PGC+ I+I+D +VF SGD SHP+
Sbjct: 631 DRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQ 676
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 215/491 (43%), Gaps = 77/491 (15%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVI 59
R + A+ +FD MP+RDTV WN MI G+ +N + ++++ +F M + D T TV+
Sbjct: 162 TRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVL 221
Query: 60 AGL--------------------MQSD----------------NVQGAKEVFDGMEVRDV 83
+ + SD + +G + +FD ++ D+
Sbjct: 222 TAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKG-RILFDQIDQPDL 280
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLK-DVVSWNLVIGALV------NCQRMDLAESY 136
+++N+MISGY N + A+ +F + V+ + ++G + + Q L ++
Sbjct: 281 ISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNL 340
Query: 137 FKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
++G + T + R + AR+LFD+ P K + +WN MI+GY NG A
Sbjct: 341 SLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRA 400
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
LFQ+M QL N + + +S Q+ W +GL+K
Sbjct: 401 ISLFQEM-------MPQLSP---NPVTVTSILSACAQLGALSIGKW--------VHGLIK 442
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
LE SN+ T ++ Y + G + A ++F+LM ++V WN MI G G +
Sbjct: 443 SER--LE----SNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGH 496
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI-HAQAIKIARNQFTTVSN 374
G+E LK F +M +SG P TF S+L CS + G +I H+ A +
Sbjct: 497 GKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYA 556
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELFERMRLTDFK 433
M+ + R G + +AL +P+ + W +++ H E A RL
Sbjct: 557 CMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMA--NVASKRLFQLD 614
Query: 434 PDDITFVGVLS 444
P+++ + +LS
Sbjct: 615 PENVGYYVLLS 625
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 197/460 (42%), Gaps = 54/460 (11%)
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
D++S T + + G + R+LF+K+ D+ +N++I G+ DNG +F H
Sbjct: 45 DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGL--PKSSIFLYTH 102
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEK 263
R T+ + ++ AIS ++ + R G++ AHS ++
Sbjct: 103 LRKKTNLRP------DNFTYAFAISAASRLEDE-------------RVGVLLHAHSIVDG 143
Query: 264 YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
SN+ + ++ YF+ A KVF++M RD +WN MI G N E+ ++ F
Sbjct: 144 VA-SNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
V M + G S D+ T +VLT ++L LG I A K + V +I++Y++C
Sbjct: 203 VDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKC 262
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G + F + D+IS+N++I G ++ E A+ LF + + + + T VG++
Sbjct: 263 GKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322
Query: 444 SACSYAGLVDQGRYYFD-CMKNKYFLQPRS-----------------------------A 473
+ R + +K LQP A
Sbjct: 323 PVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLA 382
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE-IAGER 532
+ ++ + GL D A++L E+ + +P ++L AC + +G+ + G
Sbjct: 383 SWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLI 441
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
E +N V L +MY CG +A+++F M + V
Sbjct: 442 KSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNV 481
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/579 (31%), Positives = 297/579 (51%), Gaps = 45/579 (7%)
Query: 52 MFTYNTVIAGLMQS----DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFH 107
+F + A L+QS +++ A++VFD V WN+MI Y G + EAL ++H
Sbjct: 35 IFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYH 94
Query: 108 GMPLK----DVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREG 159
M + D ++ +V+ A + E +++ + DV ++N + G
Sbjct: 95 RMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCG 154
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
++ EA ++FDKM +D+ W MI G NG A D++++MH + + ++ GL+
Sbjct: 155 KMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLI- 213
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL-EKYPYSNIASWTNVIVG 278
+ C +S + + I H Y+ K ++ T+++
Sbjct: 214 ---------------QACTTLGHSKMGLSI--------HGYMIRKDIIMDVIVQTSLVDM 250
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G + A VF M ++V W+ +I G +N L+ V M+ G PD+ +
Sbjct: 251 YAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSL 310
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-AMITMYARCGNIQSALLEFSSVP 397
SVL CS + L LG+ +H ++ R F VS+ A+I MY++CG++ A F +
Sbjct: 311 VSVLLACSQVGFLKLGKSVHGYIVR--RLHFDCVSSTAVIDMYSKCGSLSFARTVFDQIS 368
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
D ISWN+II HG E+AL LF +MR T+ KPD TF +LSA S++GLV++GRY
Sbjct: 369 FRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRY 428
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE-IRADGIEVSPTVWGALLGA 516
+F M N+Y +QP HY C+VDLL R G ++EA L+ I GI +W ALL
Sbjct: 429 WFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGI----AIWVALLSG 484
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEP 576
C H +GE+A ++V+EL P++ G+Y +++ + + R ++ + MK+ G+KK P
Sbjct: 485 CLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVP 544
Query: 577 GCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
G S +++N H FL D SH ++ + +L L E++
Sbjct: 545 GYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMK 583
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 217/473 (45%), Gaps = 53/473 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
R I+ A+ +FDK PQ WN MI Y + G + A+ L+++M D TY
Sbjct: 51 RLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTV 110
Query: 58 VIAGLMQSDNVQGAKEVF----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
V+ +S +++ +E + D DV ++++ Y G +DEA+RVF M +D
Sbjct: 111 VLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRD 170
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARK------- 166
+V W +I L + A +++M + V +++ GL++ + K
Sbjct: 171 LVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHG 230
Query: 167 -LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV------N 219
+ K DV ++ Y NG + +A +F++M +++ SW LI+G N
Sbjct: 231 YMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGN 290
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV------KEAHSYLEKYPYSNIASWT 273
+ ++ + F P++ S++SVL+ V K H Y+ + + + S T
Sbjct: 291 ALQLVVDMQSFGYKPDSV-----SLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVSST 345
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
VI Y + G + A VF+ ++ RD WN +I G + GEE L F+QM+E+ P
Sbjct: 346 AVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKP 405
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA-MITMYARCGNIQSA--L 390
D+ATF S+L+ S ++ GR + + + Q + A M+ + +R G ++ A L
Sbjct: 406 DHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQEL 465
Query: 391 LEFSSVPIHDIISWNSIICGLAYHG-------YAEKALELFERMRLTDFKPDD 436
+E S + I W +++ G HG A+K LEL PDD
Sbjct: 466 IE-SMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLEL---------NPDD 508
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 57/232 (24%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ +FD++ RD+++WN +I Y +G + A+ LF QM E NV
Sbjct: 360 ARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRE----------------TNV 403
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQ 128
+ D T+ S++S + +GL+++ F +VN
Sbjct: 404 K-----------PDHATFASLLSAFSHSGLVEKGRYWF---------------SIMVNEY 437
Query: 129 RMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYL 187
++ +E ++ MV+ L R GR+ EA++L + M + + W +++G L
Sbjct: 438 KIQPSEKHY-----------ACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCL 486
Query: 188 DNGCVGVAEDLFQK---MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET 236
++G + E +K ++ D + + N +RR D K M +T
Sbjct: 487 NHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKT 538
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 194/639 (30%), Positives = 300/639 (46%), Gaps = 83/639 (12%)
Query: 31 YFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR------DVV 84
Y K G + NA LF++M ER + +YN +I+G A +F E R D
Sbjct: 54 YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFS--EARMACLKLDKF 111
Query: 85 TWNSMISGYVCNGLIDEAL-RVFHGMPL-----KDVVSWNLVIGALVNCQRMDLAESYFK 138
++ ++S C + D AL +V HG+ + + V NL+I C+R+D A F+
Sbjct: 112 SYAGVLSA--CGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFE 169
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK------------------------ 174
D SW ++ G R G E KL KM
Sbjct: 170 SSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMV 229
Query: 175 -----------------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL 217
D+ ++ Y G +G A LF+ ++++ + +I G
Sbjct: 230 SYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGF 289
Query: 218 VNSRRIDAAISY-----FKQMPETCEK----TWNSIISVL-----IRNGLVKEAHSYLEK 263
+ + ID +Y F QM K T++SII + G K+ H+++ K
Sbjct: 290 IQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYG--KQIHAHICK 347
Query: 264 YPYSNIAS----WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+ NI S + +I Y +G +K F D+ W MI G +N E
Sbjct: 348 H---NIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESA 404
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
L F ++ SG PD T++L+ C+D+ G Q+H A+K V N+ I+M
Sbjct: 405 LALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISM 464
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
YA+ GN+ SA + F + D++SW+ +IC A HG+A+ A+ LFE M+ P+ ITF
Sbjct: 465 YAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITF 524
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+GVL+ACS+ GLV++G Y++ MK Y ++ H TC+VDLL R G + +A N I
Sbjct: 525 LGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNF---IL 581
Query: 500 ADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRED 559
G P +W LL CRI+ +I G+ E+++EL+P S Y++L +Y G
Sbjct: 582 NSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLP 641
Query: 560 AKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
A +I MK+ G++KEPG SWI++ + H F+ GD SHP
Sbjct: 642 ATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHP 680
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 167/375 (44%), Gaps = 35/375 (9%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIA 60
RI A+ LF+ + D V+WN +I GY + G + + L +M + FT + +
Sbjct: 160 RIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALK 219
Query: 61 GL-MQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
+ +N+ + G V+ D+V +++ Y G + +A+++F P ++V
Sbjct: 220 SCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNV 279
Query: 115 VSWNLVIGALVNCQRMDLAESY-----FKEMGARDVASWTIMVNGLVREGRIVEA----R 165
V +N +I + + +D +Y F +M + + + +++ +EA +
Sbjct: 280 VMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGK 339
Query: 166 KLFDKMPAKDVQAWNLMIAGYLD-NGCVGVAED---LFQKMHDRDLTSWKQLINGLVNSR 221
++ + ++Q+ + + ++ +G ED F D+ SW +I G +
Sbjct: 340 QIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNG 399
Query: 222 RIDAAISYFKQMPETCEKTWNSIISVLI---------RNGLVKEAHSYLEKYPYSNIASW 272
+ ++A++ F ++ + +K II+ ++ R+G ++ H Y K +A
Sbjct: 400 QFESALALFYELLASGKKPDEFIITTMLSACADVAAERSG--EQVHGYAVKTGIGTLAIV 457
Query: 273 TNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
N + Y + G + SA FE + DV W+VMI ++ ++ + F MK G
Sbjct: 458 QNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGI 517
Query: 332 SPDNATFTSVLTICS 346
P+ TF VLT CS
Sbjct: 518 HPNQITFLGVLTACS 532
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 33/264 (12%)
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D+ +T ++ S + G+ HA IK A N + N + +Y++ G + +A F
Sbjct: 8 DSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLF 67
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA---- 449
+ +IS+N +I G G+ KA+ LF R+ K D ++ GVLSAC
Sbjct: 68 DRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFA 127
Query: 450 -GLVDQGRYYFDCMKNKYFLQ----------PRSAH---------------YTCVVDLLG 483
G V G + + FL R H + ++
Sbjct: 128 LGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYA 187
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC--RIHNNIKVGE-IAGERVMELEPNN 540
R G +E + LL ++ G+ ++ G+ L +C ++N + G+ + G V + +
Sbjct: 188 RVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLD 247
Query: 541 SGVYLILTEMYLSCGRREDAKRIF 564
V L +MY G DA ++F
Sbjct: 248 IVVGTALLDMYAKTGYLGDAIQLF 271
>gi|9958072|gb|AAG09561.1|AC011810_20 Hypothetical protein [Arabidopsis thaliana]
Length = 421
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/415 (35%), Positives = 237/415 (57%), Gaps = 9/415 (2%)
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M ++++ W +ING + ++ + +A YF PE WN++IS I G + EA S
Sbjct: 1 MVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLF 60
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
++ P ++ SW V+ GY +G++ + +VF+ M R+V WN +I G +N E L
Sbjct: 61 DQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLG 120
Query: 322 FFVQMKESGPS-PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF-TTVSNAMITM 379
F +M + G P++AT T VL+ C+ L D G+ +H + N+ V NA+I M
Sbjct: 121 SFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDM 180
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y +CG I+ A+ F + D+ISWN++I GLA HG+ +AL LF M+ + PD +TF
Sbjct: 181 YGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTF 240
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE-- 497
VGVL AC + GLV+ G YF+ M + + P H CVVDLL R G + +A+ +N+
Sbjct: 241 VGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMP 300
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
++AD + +W LLGA +++ + +GE+A E +++LEP N +++L+ +Y GR
Sbjct: 301 VKADAV-----IWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRF 355
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
+DA R+ M++ G KKE G SWI+ +DG F S HP+ L+ +L L +
Sbjct: 356 DDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILRELKS 410
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 191/435 (43%), Gaps = 78/435 (17%)
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
++VV W SMI+GY+ N KD+VS A YF
Sbjct: 4 KNVVLWTSMINGYLLN---------------KDLVS----------------ARRYFDLS 32
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
RD+ W M++G + G ++EAR LFD+MP +DV +WN ++ GY + G + E +F
Sbjct: 33 PERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFD 92
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA--- 257
M +R++ SW LI G + R+ + FK+M + N L+ + K
Sbjct: 93 DMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFD 152
Query: 258 -----HSYLEKYPYSNI-ASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
H Y E Y+ + + N ++ Y + G + A++VF+ + RD+ WN MI GL
Sbjct: 153 FGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGL 212
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+ G E L F +MK SG SPD TF VL C + ++ G
Sbjct: 213 AAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG---------------L 257
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
N+M T +FS +P +I ++ L+ G+ +A+E +M +
Sbjct: 258 AYFNSMFT-------------DFSIMP--EIEHCGCVVDLLSRAGFLTQAVEFINKMPV- 301
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS-AHYTCVVDLLGRFGLID 489
K D + + +L A VD G + + L+PR+ A++ + ++ G G D
Sbjct: 302 --KADAVIWATLLGASKVYKKVDIGEVALEELIK---LEPRNPANFVMLSNIYGDAGRFD 356
Query: 490 EAMNLLNEIRADGIE 504
+A L +R G +
Sbjct: 357 DAARLKVAMRDTGFK 371
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 164/376 (43%), Gaps = 43/376 (11%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
N + A+ FD P+RD V WN MI GY + G + A LF+QMP RD+ ++NTV+ G
Sbjct: 19 NKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGY 78
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
+++ + VFD M R+V +WN +I GY NG + E L F M + V
Sbjct: 79 ANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSV------- 131
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
+ N M L S ++GA D W + + G + K+ DV N +
Sbjct: 132 -VPNDATMTLVLSACAKLGAFDFGKW------VHKYGETLGYNKV-------DVNVKNAL 177
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----E 238
I Y G + +A ++F+ + RDL SW +INGL A++ F +M + +
Sbjct: 178 IDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDK 237
Query: 239 KTWNSIISVLIRNGLVKEAHSYLEKY-----PYSNIASWTNVIVGYFEMGEVGSAIKVFE 293
T+ ++ GLV++ +Y I V+ G + A++
Sbjct: 238 VTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFIN 297
Query: 294 LMTTR-DVTVWNVMIFG---LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
M + D +W ++ + D+GE L+ ++++ P A F + I
Sbjct: 298 KMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNP----ANFVMLSNIYG--- 350
Query: 350 TLDLGRQIHAQAIKIA 365
D GR A +K+A
Sbjct: 351 --DAGRFDDAARLKVA 364
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 182/657 (27%), Positives = 313/657 (47%), Gaps = 93/657 (14%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-- 106
+RDM+ + +I + + GA+EVFDGM+ RD V WN M+ GYV G + A+ +F
Sbjct: 179 DRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRV 238
Query: 107 --------------------------------HGMPLK-----DVVSWNLVIGALVNCQR 129
H + +K +V N ++ CQ
Sbjct: 239 MRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQC 298
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA----- 184
++ A F M D+ +W M++G V+ G + +A +LF M +Q ++ +A
Sbjct: 299 LEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPA 358
Query: 185 --------------GYLDNGCVGV--------------------AEDLFQKMHDRDLTSW 210
GY+ C V A+++F D+
Sbjct: 359 LTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIG 418
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIIS---------VLIRNGLVKEAHSYL 261
+I+G V +R +AA+ F+ + K +++ +R G +E H Y+
Sbjct: 419 STMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIG--QELHGYV 476
Query: 262 EKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
K Y + ++ Y + G + + +F M+ +D WN MI +N EE L
Sbjct: 477 LKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEAL 536
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F QM G +N T +S+L+ C+ LP + G++IH IK +A+I MY
Sbjct: 537 DLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMY 596
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+CGN++ AL F +P + +SWNSII HG +++++L M+ FK D +TF+
Sbjct: 597 GKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFL 656
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
++SAC++AG V +G F CM +Y ++P+ H +C+VDL R G +D+AM + ++
Sbjct: 657 ALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMP- 715
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
+ +WGALL ACR+H N+++ EIA + + +L+P+N G Y++++ + GR +
Sbjct: 716 --FKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGV 773
Query: 561 KRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
++ MK+ V+K PG SW+ +N+ H+F++ D +HP + L L E+++E
Sbjct: 774 SKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLIIELKQE 830
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 163/382 (42%), Gaps = 92/382 (24%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------------- 50
++EA LF MP+ D VTWN MI G +NG +D+A+ LF M +
Sbjct: 299 LEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPA 358
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
D+F + ++ + +V+ A+ VFD + DVV
Sbjct: 359 LTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIG 418
Query: 87 NSMISGYVCNGLIDEALRVF----------------------------------HGMPLK 112
++MISGYV N + + A+++F HG LK
Sbjct: 419 STMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLK 478
Query: 113 DVVSWNLVI-GALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
+ + AL++ C R+DL+ F +M A+D +W M++ + G EA L
Sbjct: 479 NAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDL 538
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK-MHD--------RDLTSWKQLINGLV 218
F +M + V+ N+ I+ L + C G+ + K +H DL + LI+
Sbjct: 539 FRQMIMEGVKYNNVTISSIL-SACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYG 597
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL----EKYPYSNIASWTN 274
++ A+ F+ MPE E +WNSIIS +GLVKE+ L E+ ++ ++
Sbjct: 598 KCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLA 657
Query: 275 VIVGYFEMGEVGSAIKVFELMT 296
+I G+V +++F MT
Sbjct: 658 LISACAHAGQVQEGLRLFRCMT 679
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 115/301 (38%), Gaps = 35/301 (11%)
Query: 303 WNVMIFGLGENDLGEEGLKFFVQM--KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
WN +I G + F+V+M S P PD T V+ C+ L L LGR +H
Sbjct: 113 WNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRT 172
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
+ ++ V +A+I MYA G + A F + D + WN ++ G G A
Sbjct: 173 TRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASA 232
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
+ LF MR + P+ T LS C+ + G + KY L+P A +V
Sbjct: 233 VGLFRVMRASGCDPNFATLACFLSVCAAEADLLSG-VQLHTLAVKYGLEPEVAVANTLVS 291
Query: 481 LLGRF-------------------------------GLIDEAMNLLNEIRADGIEVSPTV 509
+ + GL+D+A+ L +++ G++
Sbjct: 292 MYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVT 351
Query: 510 WGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+LL A N K G EI G V + + L ++Y C A+ +F K
Sbjct: 352 LASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATK 411
Query: 569 E 569
Sbjct: 412 S 412
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 36/265 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ R+ + +F KM +D VTWN MI + +NG + A+ LF QM + N I+
Sbjct: 497 KCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISS 556
Query: 62 LMQSDNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
++ + G ++ G E+ D+ +++I Y G ++ ALRVF MP
Sbjct: 557 ILSA--CAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPE 614
Query: 112 KDVVSWNLVIGA-----LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARK 166
K+ VSWN +I A LV + +DL +E D ++ +++ G++ E +
Sbjct: 615 KNEVSWNSIISAYGAHGLVK-ESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLR 673
Query: 167 LFDKMPAK-----DVQAWNLMI-----AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
LF M + V+ + M+ AG LD +A+ F+ D W L++
Sbjct: 674 LFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKP----DAGIWGALLHA 729
Query: 217 LVNSRRID----AAISYFKQMPETC 237
R ++ A+ FK P C
Sbjct: 730 CRVHRNVELAEIASQELFKLDPHNC 754
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/645 (28%), Positives = 318/645 (49%), Gaps = 61/645 (9%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+R + A+ +F MP RDTVT+N +I G+ + ++A+ +F +M D T +
Sbjct: 189 LRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTIS 248
Query: 57 TVIAGLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
+++A ++Q ++ F D + S++ YV G ++ AL +F+
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRT 308
Query: 113 DVVSWNLVIGALVNCQRMDLAESY--FKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+VV WNL++ A Q DLA+S+ F +M + ++R L ++
Sbjct: 309 NVVLWNLILVAF--GQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQ 366
Query: 171 MPA--------KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ + D+ ++I Y G + A + + + ++D+ SW +I G V
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEY 426
Query: 223 IDAAISYFKQMPETCEKTWNSIISVL-----------IRNGLVKEAHSYLEKYPYSNIAS 271
A++ FK+M + C W I + +R GL A Y+ Y +++
Sbjct: 427 CKDALAAFKEM-QKC-GIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYS-GDVSI 483
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
W ++ Y G + A FE + +D WN ++ G ++ L EE LK F++M +SG
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGV 543
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
+ TF S L+ ++L + G+QIHA+ IK + T V NA+I++Y +CG+ + A +
Sbjct: 544 KHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKM 603
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
EFS + + +SWN+II + HG +AL+ F++M+
Sbjct: 604 EFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMK----------------------- 640
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
+G YF M +KY ++PR HY CV+D+ GR G +D A + E+ I VW
Sbjct: 641 -KEGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEM---PIAADAMVWR 696
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
LL AC++H NI+VGE+A + ++ELEP++S Y++L+ Y G+ + ++ M++ G
Sbjct: 697 TLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRG 756
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
V+KEPG SWI++ + H F GD HP ++ L +++ + +
Sbjct: 757 VRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAK 801
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/548 (23%), Positives = 250/548 (45%), Gaps = 39/548 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N + A+ +F+++ RD V+W M+ GY +NG + A+ L+ QM + V++
Sbjct: 89 KNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSS 148
Query: 62 LM------------QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
++ +S + QG K+ F + N++I+ Y+ G A RVF+ M
Sbjct: 149 VLSSCTKAELFAQGRSVHAQGYKQGF----CSETFVGNALITLYLRCGSFRLAERVFYDM 204
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE----GRIVEAR 165
P +D V++N +I C + A F+EM + ++ + ++ L+ G + +
Sbjct: 205 PHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGT 264
Query: 166 K----LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
+ LF + D ++ Y+ G V A +F + ++ W ++
Sbjct: 265 QLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQIN 324
Query: 222 RIDAAISYFKQMPETCEK----TWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTN 274
+ + F QM + T+ I+ G L ++ HS K + + +
Sbjct: 325 DLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSG 384
Query: 275 VIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
V++ Y + G + A +V E++ +DV W MI G +++ ++ L F +M++ G P
Sbjct: 385 VLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWP 444
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
DN S ++ C+ + + G QIHA+ + ++ NA++ +YARCG I+ A F
Sbjct: 445 DNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSF 504
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ D I+WN ++ G A G E+AL++F RM + K + TFV LSA + +
Sbjct: 505 EEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIK 564
Query: 454 QGRY-YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
QG+ + +K + + + ++ L G+ G ++A +E+ E + W
Sbjct: 565 QGKQIHARVIKTGHSFETEVGN--ALISLYGKCGSFEDAKMEFSEMS----ERNEVSWNT 618
Query: 513 LLGACRIH 520
++ +C H
Sbjct: 619 IITSCSQH 626
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 144/566 (25%), Positives = 247/566 (43%), Gaps = 76/566 (13%)
Query: 50 RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
+D N +I ++ V A+ VF+ + RD V+W +M+SGY NGL +EAL ++ M
Sbjct: 75 KDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQM 134
Query: 110 PLKDVVSWNLVIGA-LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
VV V+ + L +C + + L +GR V A+ +
Sbjct: 135 HRAGVVPTPYVLSSVLSSCTKAE-----------------------LFAQGRSVHAQG-Y 170
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+ + N +I YL G +AE +F M RD ++ LI+G + A+
Sbjct: 171 KQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALE 230
Query: 229 YFKQMPETCEK----TWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YF 280
F++M + T +S+++ G +++ HSYL K S+ ++ Y
Sbjct: 231 IFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYV 290
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE-NDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G+V +A+ +F L +V +WN+++ G+ NDL + + F QM+ +G P+ T+
Sbjct: 291 KCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKS-FELFCQMQTAGIRPNQFTYP 349
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
+L C+ +DLG QIH+ ++K VS +I MY++ G ++ A +
Sbjct: 350 CILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK 409
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS-----YAGLVDQ 454
D++SW S+I G H Y + AL F+ M+ PD+I +S C+ GL
Sbjct: 410 DVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIH 469
Query: 455 GRYY----------FDCMKNKYFLQPR---------------SAHYTCVVDLLGRFGLID 489
R Y ++ + N Y R + +V + GL +
Sbjct: 470 ARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHE 529
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM------ELEPNNSGV 543
EA+ + + G++ + + + L A IK G+ RV+ E E N+
Sbjct: 530 EALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA-- 587
Query: 544 YLILTEMYLSCGRREDAKRIFAQMKE 569
L +Y CG EDAK F++M E
Sbjct: 588 ---LISLYGKCGSFEDAKMEFSEMSE 610
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 149/325 (45%), Gaps = 31/325 (9%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G V A +VFE ++ RD W M+ G +N LGEE L + QM +G P
Sbjct: 87 YSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVL 146
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+SVL+ C+ GR +HAQ K T V NA+IT+Y RCG+ + A F +P
Sbjct: 147 SSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPH 206
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG--- 455
D +++N++I G A + E ALE+FE M+ + PD +T +L+AC+ G + +G
Sbjct: 207 RDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQL 266
Query: 456 -RYYFDC-MKNKYFLQPR---------SAHYTCVVDLLGR-------------FGLIDE- 490
Y F M + Y ++ V+ LG FG I++
Sbjct: 267 HSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDL 326
Query: 491 --AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE-IAGERVMELEPNNSGVYLIL 547
+ L +++ GI + + +L C I +GE I V ++ V +L
Sbjct: 327 AKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVL 386
Query: 548 TEMYLSCGRREDAKRIFAQMKENGV 572
+MY G E A+R+ +KE V
Sbjct: 387 IDMYSKYGWLEKARRVLEMLKEKDV 411
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 99/242 (40%), Gaps = 35/242 (14%)
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+IHA+AI + V N +I +Y++ G + A F + D +SW +++ G A +G
Sbjct: 63 EIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR------------------- 456
E+AL L+ +M P VLS+C+ A L QGR
Sbjct: 123 LGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGN 182
Query: 457 ----YYFDC-----MKNKYFLQPR--SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
Y C + ++ P + + ++ + + A+ + E+++ G+
Sbjct: 183 ALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSP 242
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI---LTEMYLSCGRREDAKR 562
+LL AC +++ G + + S Y++ L ++Y+ CG E A
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYL--FKAGMSSDYIMEGSLLDLYVKCGDVETALV 300
Query: 563 IF 564
IF
Sbjct: 301 IF 302
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/493 (32%), Positives = 264/493 (53%), Gaps = 10/493 (2%)
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM---GARDVASWTIMVNGLVREGRIVEARKLFDK 170
+VSWNL+I + QR + A + F ++ D + ++ G R G + E +++
Sbjct: 80 LVSWNLLIKCYIENQRSNDAIALFCKLLCDFVPDSFTLPCVLKGCARLGALQEGKQIHGL 139
Query: 171 MP----AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ D + +++ Y G + + +F +M D+D+ SW LI+G I+ A
Sbjct: 140 VLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 199
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVG 286
+ F++MPE +W +I L ++G ++ A ++ P N SW +I GY + G+
Sbjct: 200 LEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSN 259
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
+A ++F+ M R + WN MI G N + LK F M SP+ T ++ S
Sbjct: 260 TAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAAS 319
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
+ +L GR +H+ +K + +I MY++CG+++SAL F S+P + W S
Sbjct: 320 GMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTS 379
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
+I GL HG E+ LELF+ M T KP ITF+GVL+ACS+AG + YF M Y
Sbjct: 380 VIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDY 439
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
++P HY C++D+L R G ++EA + + + I+ + +W +LL R H NI++G
Sbjct: 440 GIKPSIEHYGCLIDVLCRAGHLEEAKDTIERM---PIKANKVIWTSLLSGSRKHGNIRMG 496
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
E A + +++L P+ +G Y+IL+ MY + G E +++ MK+ G+KK+PGCS I+
Sbjct: 497 EYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGS 556
Query: 587 GHVFLSGDSSHPK 599
H F+ GD SHP+
Sbjct: 557 IHEFIVGDKSHPQ 569
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/472 (28%), Positives = 229/472 (48%), Gaps = 26/472 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVIA 60
+Q A +LFD + + V+WN++I+ Y +N ++A+ LF ++ P D FT V+
Sbjct: 65 LQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFVP--DSFTLPCVLK 122
Query: 61 GLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
G + +Q K++ G+ ++ D +S++S Y G I+ +VF M KDVV
Sbjct: 123 GCARLGALQEGKQIH-GLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVV 181
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
SWN +I C ++LA F+EM +D SWTI+++GL + G++ AR +FD+MP ++
Sbjct: 182 SWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRN 241
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-P 234
+WN MI GY+ G A++LF +M +R L +W +I G +++ A+ F+ M
Sbjct: 242 SVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLR 301
Query: 235 ETCEKTWNSII------SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGS 287
E + +I+ S ++ G + HSY+ K + +++ Y + G V S
Sbjct: 302 EDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKS 361
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A++VF + + + W +I GLG + L E+ L+ F +M +G P TF VL CS
Sbjct: 362 ALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSH 421
Query: 348 LP-TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWN 405
D R +I + R G+++ A +PI + + W
Sbjct: 422 AGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWT 481
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC-SYAGLVDQGR 456
S++ G HG + + L D PD +LS + AGL ++ R
Sbjct: 482 SLLSGSRKHGNIR--MGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVR 531
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 157/302 (51%), Gaps = 18/302 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R I+ A +F++MP++D+ +W ++I G K+G L+ A +F++MP R+ ++N +I G
Sbjct: 192 RCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMING 251
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV-SWNLV 120
M++ + AKE+FD M R +VTWNSMI+GY N +AL++F M +D+ ++ +
Sbjct: 252 YMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTI 311
Query: 121 IGALVNCQRM------DLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPA 173
+GA+ M SY + G + D T+++ + G + A ++F +P
Sbjct: 312 LGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPK 371
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISY 229
K + W +I G +G V +LF +M L ++ ++N ++ + A Y
Sbjct: 372 KKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRY 431
Query: 230 FKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMG 283
FK M + + + +I VL R G ++EA +E+ P +N WT+++ G + G
Sbjct: 432 FKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHG 491
Query: 284 EV 285
+
Sbjct: 492 NI 493
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 15/216 (6%)
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYA--RCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
Q+HA +IK A +VS+ ++ +YA R N+Q A F + ++SWN +I
Sbjct: 33 QLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIE 92
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSA 473
+ + A+ LF ++ L DF PD T VL C+ G + +G+ + F +
Sbjct: 93 NQRSNDAIALFCKL-LCDFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFV 151
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI--AGE 531
+ +V + + G I+ + + + + W +L I + GEI A E
Sbjct: 152 -LSSLVSMYSKCGEIELCRKVFDRMEDKDV----VSWNSL-----IDGYARCGEIELALE 201
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
E+ +S + IL + G+ E A+ +F +M
Sbjct: 202 MFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRM 237
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 182/551 (33%), Positives = 291/551 (52%), Gaps = 27/551 (4%)
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP-LKDVVSWN-----LVIGALVNCQRMD 131
++ +V WN+MI V NGLI + + M L+ + N ++ ALV+ Q +
Sbjct: 49 LDCANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVK 108
Query: 132 LAESYFKEMGARDVASWTIMVNGL----VREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
E + A + L V G + + R++FD+M + W L+I Y+
Sbjct: 109 EGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYV 168
Query: 188 DNGCVGVAE---DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW--- 241
CV E +LF+ M + LT I+ +V++ + + K M EK+
Sbjct: 169 ---CVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEV 225
Query: 242 -----NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
+++IS G + A+ + ++ P NI W +I E + ++F+ M
Sbjct: 226 DAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMP 285
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
RDV WN MI G +E L +F +M+ SG SP+ T S L+ C+ LD G
Sbjct: 286 DRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAW 345
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
IHA K N+ ++ +++I MY++CG+I A+ F D+ +W SI+CGLA HG
Sbjct: 346 IHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGR 405
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
EKAL F +M+ +PDD+T VGVLSAC++AGL+DQG +YF M+ + L P+ HY
Sbjct: 406 GEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYG 465
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
C+VDLLGR G + EA +L I +E + +WGA L ACR+HNN+++GE+A R++ L
Sbjct: 466 CMVDLLGRMGCLKEAYDL---IMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGL 522
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSS 596
+P + ++L+ MY + + + + ++K+ G+KK PGCS I++N H FL GD+S
Sbjct: 523 DPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNS 582
Query: 597 HPKFHRLRYLL 607
HP + + ++
Sbjct: 583 HPCYTEINSMV 593
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 203/477 (42%), Gaps = 63/477 (13%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQM--------PERDMFTY---------------- 55
+ WN MIR +NG + L M P F Y
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 56 ---NTVIAGLMQSDNVQGA--------------KEVFDGMEVRDVVTWNSMISGYVCNGL 98
+ V G S+ V GA ++VFD M +V W +I YVC
Sbjct: 113 VHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTF 172
Query: 99 IDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESY--FKEMGARDVASW--TI 150
++AL +F M D+V+ + V+ A + +A++ F E +V ++ +
Sbjct: 173 PEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSST 232
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
+++ G + A + F + P K++ WN MI +++ + + + LFQ M DRD+ SW
Sbjct: 233 LISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSW 292
Query: 211 KQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIRNGLVKEA---HSYLEK 263
+I G + A+++F +M T S +S +G + H+Y++K
Sbjct: 293 NSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDK 352
Query: 264 YPYSNIASW-TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ S +++I Y + G++ A+++FE T RD+ W ++ GL + GE+ L +
Sbjct: 353 NDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHY 412
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMY 380
F +MKE+ PD+ T VL+ C+ LD G + Q+++ V + M+ +
Sbjct: 413 FSKMKEAQVQPDDVTMVGVLSACAHAGLLDQG-WWYFQSMEKVFGLVPKVEHYGCMVDLL 471
Query: 381 ARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
R G ++ A +P+ + I W + + H E E+ R RL P D
Sbjct: 472 GRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELG-EVAAR-RLLGLDPRD 526
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 132/310 (42%), Gaps = 53/310 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIA- 60
+ + + +FD+M Q V W ++IR Y F + A+ LF M E DM +TV++
Sbjct: 142 VGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSA 201
Query: 61 -GLMQSDNVQGAKEVF---DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
GL+ V A F G+EV D +++IS Y G +D A R F P+K++V
Sbjct: 202 CGLLGDLGVAKAMHCFIEKSGIEV-DAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVV 260
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP---- 172
WN +I V ++L + F+ M RDV SW M+ G R G+ EA F +M
Sbjct: 261 WNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGV 320
Query: 173 ------------------AKDVQAW-----------------NLMIAGYLDNGCVGVAED 197
A D AW + +I Y G + A
Sbjct: 321 SPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQ 380
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGL 253
+F++ RDL +W ++ GL R + A+ YF +M E + T ++S GL
Sbjct: 381 IFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGL 440
Query: 254 VKEAHSYLEK 263
+ + Y +
Sbjct: 441 LDQGWWYFQS 450
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 151/371 (40%), Gaps = 61/371 (16%)
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
VE ++ +V WN MI ++NG + L M GL
Sbjct: 40 VEDPSAASRLDCANVFVWNTMIRKQVENGLITRDPPLLYYMQ------------GLRAGL 87
Query: 222 RIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG 278
R + T+ ++ L+ VKE H+ + + ++ + ++G
Sbjct: 88 RPNG-------------HTFMYLLKALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLG 134
Query: 279 YF-EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
++ G VG +VF+ M + +W ++I E+ L+ F M+E G +PD
Sbjct: 135 FYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVA 194
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL------- 390
++V++ C L L + + +H K VS+ +I+ Y CG++ A
Sbjct: 195 ISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETP 254
Query: 391 -------------------LE-----FSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
LE F S+P D++SWNS+I G A G ++AL F
Sbjct: 255 MKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHE 314
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
M + P+ +T + LSAC+ G +D G + +K + + + ++D+ + G
Sbjct: 315 MEFSGVSPNALTLLSTLSACASHGALDTGA-WIHAYVDKNDMNRDGSLDSSLIDMYSKCG 373
Query: 487 LIDEAMNLLNE 497
ID+A+ + E
Sbjct: 374 DIDKAVQIFEE 384
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 187/652 (28%), Positives = 330/652 (50%), Gaps = 55/652 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
R A A+ +FD+MP R+ V+W +I + +NG +A+ LF+ M D F +
Sbjct: 98 RCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGS 157
Query: 58 VIAGLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+ + +V ++V D++ N++++ Y NGL+D+ +F + KD
Sbjct: 158 AVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKD 217
Query: 114 VVSWNLVIG----------ALVNCQRMDLAESY----------FKEMGARDVASWTI--M 151
++SW +I AL ++M + S+ F+ GA V SW
Sbjct: 218 LISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGA--VGSWEYGEQ 275
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
++GL + R+ R L+ D M A + + VA F ++ DL SW
Sbjct: 276 IHGLSIKYRL--DRDLYVGCSLSD------MYARFKNLDSARVA---FYRIEAPDLVSWN 324
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA-------HSYLEKY 264
++N + A+ F +M ++ + + L+ + ++A HSYL K
Sbjct: 325 SIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKL 384
Query: 265 PYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
S N ++ Y ++ SA+ VF + +DV WN ++ +++ EE LK F
Sbjct: 385 GLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLF 444
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
+ +S PS D + +VL+ ++L ++ +Q+HA A K +SN +I YA+C
Sbjct: 445 SLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKC 504
Query: 384 GNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
G++ A+ F + + D+ SW+S+I G A GYA++AL+LF RMR +P+ +TF+GV
Sbjct: 505 GSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGV 564
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
L+ACS G V++G YY+ M+ +Y + P H +C+VDLL R G + EA N ++++
Sbjct: 565 LTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMP--- 621
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
E +W LL A ++HN++++G+ A E ++ ++P++S Y++L +Y + G + R
Sbjct: 622 FEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFAR 681
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
+ M+ +GVKK PG SW+++ VF+ D SHP+ + +L L+ E+
Sbjct: 682 LKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEM 733
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 186/449 (41%), Gaps = 42/449 (9%)
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAES 135
D + V N +I+ Y D A +VF MP ++ VSW VI A V R A
Sbjct: 79 DAQLAGNTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALG 138
Query: 136 YFKEMGARDVASWTIMVNGLVRE---------GRIVEARKLFDKMPAKDVQAWNLMIAGY 186
F M A+ + VR GR V A L + D+ N ++ Y
Sbjct: 139 LFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSER-GSDLIVQNALVTMY 197
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII- 245
NG V LF+++ D+DL SW +I G A+ F++M N
Sbjct: 198 SKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHF 257
Query: 246 -SVLIRNGLV------KEAHSYLEKYPYSNIASWTNVIVG------YFEMGEVGSAIKVF 292
S G V ++ H KY ++ VG Y + SA F
Sbjct: 258 GSAFRACGAVGSWEYGEQIHGLSIKYRLDR-----DLYVGCSLSDMYARFKNLDSARVAF 312
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ D+ WN ++ L E L F +M++SG PD T +L C L
Sbjct: 313 YRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALY 372
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
GR IH+ +K+ + +V N++++MYARC ++ SA+ F + D+++WNSI+ A
Sbjct: 373 HGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACA 432
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN------KY 466
H + E+ L+LF + ++ D I+ VLSA + G YF+ +K K
Sbjct: 433 QHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELG-------YFEMVKQVHAYAFKA 485
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
L ++D + G +D+AM L
Sbjct: 486 GLVDDRMLSNTLIDTYAKCGSLDDAMRLF 514
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 145/356 (40%), Gaps = 32/356 (8%)
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+ LV + S + N ++I Y SA +VF+ M R+ W +I
Sbjct: 66 VHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIA 125
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
+N + L F M SG + D S + C++L + GRQ+HA A+K R
Sbjct: 126 AHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGS 185
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
V NA++TMY++ G + + F + D+ISW SII G A G+ +AL++F +M
Sbjct: 186 DLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMI 245
Query: 429 LT-DFKPDDITFVGVLSACSYAGLVDQGR--------------YYFDCMKNKYFLQ---- 469
+ P++ F AC G + G Y C + + +
Sbjct: 246 VEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNL 305
Query: 470 ------------PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
P + +V+ GL+ EA+ L +E+R G+ LL AC
Sbjct: 306 DSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCAC 365
Query: 518 RIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ + G + +++L + + V L MY C A +F ++K+ V
Sbjct: 366 VGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDV 421
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 24/191 (12%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAI---------KIARNQFTTVSNAMITMYARCGNIQS 388
+ ++++ CS L +L GR++H + ++A N T + N +ITMY RC S
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGN--TVLGNHLITMYGRCAAPDS 104
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F +P + +SW S+I +G A AL LF M + D + AC+
Sbjct: 105 ARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTE 164
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAH----YTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
G V GR + + L+ +V + + GL+D+ L I+ +
Sbjct: 165 LGDVGTGR-----QVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDL- 218
Query: 505 VSPTVWGALLG 515
WG+++
Sbjct: 219 ---ISWGSIIA 226
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 189/667 (28%), Positives = 320/667 (47%), Gaps = 72/667 (10%)
Query: 8 EAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFT-YNTVIAGLMQ 64
+A+++F+ M QR+ V+WN MI Y +NG A+ L+ +M + + T + T ++ L
Sbjct: 60 DARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGA 119
Query: 65 SDNVQGAKEV-----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
++ +E+ + G++ + N++++ Y G + +A R+F + +D SWN
Sbjct: 120 CSSLAQGREIHNRVFYSGLDSFQSLA-NALVTMYARFGSVGDAKRMFQSLQTRDETSWNA 178
Query: 120 VIGALVNCQRMDLAESYFKEMGA------------------------------------- 142
VI A A FKEM
Sbjct: 179 VILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238
Query: 143 -RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
D+ T ++N + G EAR++FDKM +D+ +WN+MI Y+ NG A +L+QK
Sbjct: 239 DTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQK 298
Query: 202 MHDRDLTSWKQL-------------INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL 248
+ D+ +K+ + L R + + I E T +++++
Sbjct: 299 L---DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVAT--ALVNMY 353
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMG---EVGSAIKVFELMTTRDVTVWNV 305
+ G ++EA + +W+ +I Y G + A KVF+ + +RD WN
Sbjct: 354 AKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNA 413
Query: 306 MIFGLGENDLGEEGLKFFVQMK-ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
MI +N +K F +M +G PD TF +VL C+ L L + +HAQ +
Sbjct: 414 MITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISES 473
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
V+N +I MYARCG+++ A F++ ++SW +++ + +G +AL+LF
Sbjct: 474 ELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLF 533
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
+ M L KPDD+T+ +L C++ G ++QG YF M + L P + H+ +VDLLGR
Sbjct: 534 QEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGR 593
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G + +A LL + E P W L ACRIH +++GE A ERV EL+P+++ Y
Sbjct: 594 SGRLFDAKELLESM---PFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPY 650
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
+ ++ +Y + G E + +M+E G+KK PG S+I+++ H F SG HP+ +
Sbjct: 651 IAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEIC 710
Query: 605 YLLNLLH 611
L LH
Sbjct: 711 EELTRLH 717
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 142/313 (45%), Gaps = 53/313 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++EA+ +F+ M RD V W+ +I Y NG+ +A
Sbjct: 359 LEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDA------------------------- 393
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP----LK-DVVSWNLV 120
+ A++VFD + RD ++WN+MI+ YV NG A+++F M LK D V++ V
Sbjct: 394 ---RKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAV 450
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDV 176
+ A + R+ ++ ++ ++ S ++ N L+ R G + EA +LF K V
Sbjct: 451 LEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTV 510
Query: 177 QAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+W M+A + G A DLFQ+M D ++ ++ + ++ YF
Sbjct: 511 VSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTD 570
Query: 233 MPE-----TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIV-----GYFE 281
M E + +++ +L R+G + +A LE P+ + +W + G E
Sbjct: 571 MAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLE 630
Query: 282 MGEVGSAIKVFEL 294
+GE +A +V+EL
Sbjct: 631 LGE-AAAERVYEL 642
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 126/278 (45%), Gaps = 53/278 (19%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR-NQFTTVSNAMITMYARCGNIQSALL 391
PDN TF +VL CS + GR +H + I+ +R + T V NA+I+MY +C ++ A
Sbjct: 5 PDNVTFLTVLCSCSSCGDVVEGRALH-ERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 392 EFSSVP--IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F S+ +++SWN++I A +G++ +AL L+ RM L D +TFV VL ACS
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122
Query: 450 GLVDQGRYYFDCMKNKYF---LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
+ QGR + N+ F L + +V + RFG + +A + ++
Sbjct: 123 --LAQGRE----IHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTR----D 172
Query: 507 PTVWGALL----------GACRIHNNIK----------VGEIAGERVMELEPNNSGVY-- 544
T W A++ GA RI +K + I+G E+ P ++
Sbjct: 173 ETSWNAVILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAE 232
Query: 545 -------------LILTEMYLSCGRREDAKRIFAQMKE 569
L MY CG +A+ +F +MK+
Sbjct: 233 IVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKK 270
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 175/559 (31%), Positives = 286/559 (51%), Gaps = 44/559 (7%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-LVIGALVN 126
+ A+ VFD M R+ V+W +M++GY EA +F M + + N V A+++
Sbjct: 169 IPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPLHKNEFVATAVLS 228
Query: 127 CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
+ L MG + V+GLV + +V V N ++ Y
Sbjct: 229 AISVPLG----LPMG--------VQVHGLVVKDGMV-----------GFVSVENSLVTMY 265
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-----PETCEKTW 241
GC+ A +F+ +R+ +W +I G + ++A+ F QM P T E T
Sbjct: 266 AKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPT-EFTL 324
Query: 242 NSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTT 297
+++ G + K+AH + K + + +V Y + G +G A + F +
Sbjct: 325 VGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSE 384
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
D+ +W M+ G +N E+ L + +M + G P+ T TS+L C+ L L+ G+Q+
Sbjct: 385 LDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQL 444
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H Q +K +V +A+ TMY++CGN++ ++ F +P D+I+WNSII G + +G
Sbjct: 445 HTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRG 504
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
A+ LFE M+L PD +TF+ VL ACS+ GLVD+G YF M Y L PR HY C
Sbjct: 505 NDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYAC 564
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
+VD+L R G++ EA + + I I+ +W +LGACR + VG AGE++M+L
Sbjct: 565 MVDILSRAGMLSEAKDFIESIT---IDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLG 621
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
+S Y++L+ +Y + + D +R+ MK GV K+PGCSW+++N HVF+ G+ H
Sbjct: 622 TGDSAAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFVVGEQQH 681
Query: 598 PKFHRLRYLLNLLHTEIER 616
P +++TE+ R
Sbjct: 682 PD-------AEIINTELRR 693
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 176/399 (44%), Gaps = 52/399 (13%)
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
T ++N + G I +A+ +FD+MP ++ +W M+AGY C A +LF++M
Sbjct: 157 TALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPL 216
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
+ + V S AIS +P + + +++++G+V
Sbjct: 217 HKNEFVATAVLS-----AISVPLGLPMGVQ-----VHGLVVKDGMV------------GF 254
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
++ +++ Y + G + +A VFE R+ W+ MI G +N E ++ F QM
Sbjct: 255 VSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHA 314
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
+G P T VL CSD+ TL G+Q H +K+ V +A++ MYA+CG I
Sbjct: 315 AGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGD 374
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F+ DI+ W +++ G +G E+AL L+ RM P+ +T +L AC+
Sbjct: 375 AKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAG 434
Query: 449 AGLVDQGR-----------------------YYFDC--MKNKYFLQPRSAH-----YTCV 478
++ G+ Y C +++ + R H + +
Sbjct: 435 LAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSI 494
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ + G ++A+NL E++ +G P + +L AC
Sbjct: 495 ISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCAC 533
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 176/384 (45%), Gaps = 28/384 (7%)
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQM--PETCEKTWNSIISVLIRNGLVKE------ 256
RD+ SW L+N L + R + AA+S+F+ M T + +S +
Sbjct: 80 RDVASWNSLLNPLSHHRPL-AALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAV 138
Query: 257 AHSYLEKYPY--SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
H+ K P SN+ T ++ Y ++G + A VF+ M R+ W M+ G
Sbjct: 139 VHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARK 198
Query: 315 LGEEGLKFFVQMKESGPSPDNA-TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
+E + F QM P N T+VL+ S L +G Q+H +K F +V
Sbjct: 199 CSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVE 258
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
N+++TMYA+ G + +A F S + I+W+++I G + +G AE A+ +F +M F
Sbjct: 259 NSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFP 318
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
P + T VGVL+ACS G + +G+ M K + + + +VD+ + G I +A
Sbjct: 319 PTEFTLVGVLNACSDVGTLMEGKQAHGLMV-KLGFEVQVYVKSALVDMYAKCGCIGDAKE 377
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY---LILTEM 550
N+ E+ +W A+ + +++ GE ++ + GV+ L +T +
Sbjct: 378 CFNQFS----ELDIVLWTAM-----VTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSL 428
Query: 551 YLSC---GRREDAKRIFAQMKENG 571
+C E K++ Q+ + G
Sbjct: 429 LRACAGLAALEPGKQLHTQILKFG 452
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 170/376 (45%), Gaps = 29/376 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----P-ERDMFTYNTVIA 60
I +AQ +FD+MP R+ V+W M+ GY A LF QM P ++ F V++
Sbjct: 169 IPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPLHKNEFVATAVLS 228
Query: 61 ------GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
GL V G V DGM V V NS+++ Y G +D A VF ++
Sbjct: 229 AISVPLGLPMGVQVHGLV-VKDGM-VGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNS 286
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE----GRIVEARKLFDK 170
++W+ +I + A F +M A + G++ G ++E ++
Sbjct: 287 ITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGL 346
Query: 171 MP--AKDVQAW--NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
M +VQ + + ++ Y GC+G A++ F + + D+ W ++ G V + + A
Sbjct: 347 MVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQA 406
Query: 227 ISYFKQMPETCEKTWNSIISVLIR--NGLV-----KEAHSYLEKYPYSNIASWTNVI-VG 278
+ + +M + I+ L+R GL K+ H+ + K+ + AS + +
Sbjct: 407 LMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTM 466
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G + + VF M RDV WN +I G +N G + + F +MK G +PD TF
Sbjct: 467 YSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTF 526
Query: 339 TSVLTICSDLPTLDLG 354
+VL CS + +D G
Sbjct: 527 INVLCACSHMGLVDRG 542
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 50/215 (23%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I +A+ F++ + D V W M+ G+ +NG + A+ L+ +M + +F I L+++
Sbjct: 372 IGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRA 431
Query: 66 ---------------------------------------DNVQGAKEVFDGMEVRDVVTW 86
N++ VF M RDV+ W
Sbjct: 432 CAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAW 491
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQRMDLAE---SYFKEMGA 142
NS+ISG+ NG ++A+ +F M L+ + I L C M L + +YF+ M
Sbjct: 492 NSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSM-I 550
Query: 143 RDVA------SWTIMVNGLVREGRIVEARKLFDKM 171
+D + MV+ L R G + EA+ + +
Sbjct: 551 KDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESI 585
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGN--IQSALLEFSSVP--IHDIISWNSIIC 409
G +HA A+K + VSN++IT Y+ + +A F+ +P D+ SWNS++
Sbjct: 31 GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLN 90
Query: 410 GLAYH 414
L++H
Sbjct: 91 PLSHH 95
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 199/644 (30%), Positives = 323/644 (50%), Gaps = 76/644 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ + EA+ +FD + + TVTW +I GY K G + ++ LFNQM E D++ VI+
Sbjct: 201 KRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISS 260
Query: 62 LMQS----DNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++ + + ++G K++ G +R DV N +I Y+ + ++F+ + K
Sbjct: 261 VLSACSMLEFLEGGKQI-HGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDK 319
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEM--------------------------GARDVA 146
DVVSW +I + A F EM R V
Sbjct: 320 DVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVH 379
Query: 147 SWTIMVN----GLVREGRI---------VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
++ I VN V+ G I ARK+FD + A +V ++N MI GY +
Sbjct: 380 AYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLV 439
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A DLF++M R S L+ + + C ++I+ G+
Sbjct: 440 EALDLFREM--RLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHC---------LIIKFGV 488
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
++ + + +I Y + VG A VFE + RD+ VWN M G +
Sbjct: 489 SLDSFA------------GSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQ 536
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
EE LK + ++ S P+ TF +V+ S++ +L G+Q H Q IK+ + V+
Sbjct: 537 LENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVT 596
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
N+++ MYA+CG+I+ + FSS DI WNS+I A HG A KALE+FERM + K
Sbjct: 597 NSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVK 656
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
P+ +TFVG+LSACS+AGL+D G ++F+ M +K+ ++P HY C+V LLGR G I EA
Sbjct: 657 PNYVTFVGLLSACSHAGLLDLGFHHFESM-SKFGIEPGIDHYACMVSLLGRAGKIYEAKE 715
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
+ ++ I+ + VW +LL ACR+ ++++G A E + +P +SG Y++L+ ++ S
Sbjct: 716 FVKKM---PIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFAS 772
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
G + + +M + V KEPG SWI++N+ H F++ D++H
Sbjct: 773 KGMWASVRMVREKMDMSRVVKEPGWSWIEVNNEVHRFIARDTAH 816
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 156/606 (25%), Positives = 274/606 (45%), Gaps = 53/606 (8%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVIAGL 62
+AQ LFD MP R+ VTW+ M+ Y ++G+ A+ LF + + + + +V+
Sbjct: 105 DAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRAC 164
Query: 63 MQSDNVQGAKE----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
Q N+ A + V G V+DV S+I Y G +DEA +F G+ +K V+W
Sbjct: 165 TQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWT 224
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVE------------ARK 166
+I R +++ F +M DV +++ ++ ++E R+
Sbjct: 225 AIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRR 284
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
FD DV N +I YL V LF ++ D+D+ SW +I G + + A
Sbjct: 285 GFD----MDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDA 340
Query: 227 ISYFKQM------PET--CEKTWNSIISV-LIRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
+ F +M P+ C NS S+ ++ G ++ H+Y K N N ++
Sbjct: 341 MDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKG--RQVHAYAIKVNIDNDDFVKNGLI 398
Query: 278 G-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + + +A KVF+L+ +V +N MI G D E L F +M+ S P
Sbjct: 399 DMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLL 458
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
TF S+L + S L L+L QIH IK + + +A+I +Y++C + A L F +
Sbjct: 459 TFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEI 518
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
DI+ WN++ G + E++L+L++ ++++ KP++ TF V++A S + G+
Sbjct: 519 YDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQ 578
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
+ + + K L +VD+ + G I+E+ + I W +++
Sbjct: 579 QFHNQVI-KMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDI----ACWNSMIST 633
Query: 517 CRIHNN-IKVGEIAGERVME-LEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKENG 571
H + K E+ +ME ++PN Y+ + +C G + F M + G
Sbjct: 634 YAQHGDAAKALEVFERMIMEGVKPN----YVTFVGLLSACSHAGLLDLGFHHFESMSKFG 689
Query: 572 VKKEPG 577
+ EPG
Sbjct: 690 I--EPG 693
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 198/428 (46%), Gaps = 41/428 (9%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N++ Y+K + F+Q D+F NT++ + + A+++FD M R++V
Sbjct: 63 NILTSHYYKKIHAHIVVLGFHQ---HDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLV 119
Query: 85 TWNSMISGYVCNGLIDEALRVF-----------HGMPLKDVVSWNLVIGALVNCQRMDLA 133
TW+SM+S Y +G EAL +F + L VV +G L Q + L
Sbjct: 120 TWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNL--SQALQLH 177
Query: 134 ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
K +DV T +++ + G + EAR +FD + K W +IAGY G
Sbjct: 178 GFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSE 237
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
V+ LF +M + D+ + +I+ ++++ M E E
Sbjct: 238 VSLKLFNQMREGDVYPDRYVISSVLSA----------CSMLEFLEGG------------- 274
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
K+ H Y+ + + S N I+ Y + +V + K+F + +DV W MI G +
Sbjct: 275 -KQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQ 333
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N + + FV+M G PD TSVL C L L GRQ+HA AIK+ + V
Sbjct: 334 NSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFV 393
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
N +I MYA+C ++ +A F V +++S+N++I G + +AL+LF MRL+
Sbjct: 394 KNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLS 453
Query: 433 KPDDITFV 440
P +TFV
Sbjct: 454 PPTLLTFV 461
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 137/291 (47%), Gaps = 9/291 (3%)
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV-NSRRIDAAISYFKQM 233
DV N ++ Y A+ LF M R+L +W +++ + ++A + + + M
Sbjct: 86 DVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFM 145
Query: 234 PETCEKTWNSIISVLIRN----GLVKEA---HSYLEKYPY-SNIASWTNVIVGYFEMGEV 285
EK I++ ++R G + +A H ++ K + ++ T++I Y + G V
Sbjct: 146 RSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYV 205
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A +F+ + + W +I G + E LK F QM+E PD +SVL+ C
Sbjct: 206 DEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSAC 265
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
S L L+ G+QIH ++ + +V N +I Y +C +++ F+ + D++SW
Sbjct: 266 SMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWT 325
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
++I G + + A++LF M +KPD VL++C + +GR
Sbjct: 326 TMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGR 376
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 133/321 (41%), Gaps = 36/321 (11%)
Query: 278 GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ-MKESGPSPDNA 336
Y +M A K+F+ M R++ W+ M+ ++ E L F + M+ P+
Sbjct: 96 AYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEY 155
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
SV+ C+ L L Q+H +K Q V ++I YA+ G + A L F +
Sbjct: 156 ILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGL 215
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+ ++W +II G A G +E +L+LF +MR D PD VLSACS ++ G+
Sbjct: 216 KVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGK 275
Query: 457 -----------------------YYFDCMKNKY-------FLQPRSAHYTCVVDLLGRFG 486
+Y C K K + +T ++ +
Sbjct: 276 QIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNS 335
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWG--ALLGACRIHNNIKVGEIAGERVMELEPNNSG-V 543
+AM+L E+ G + P +G ++L +C ++ G +++ +N V
Sbjct: 336 FHGDAMDLFVEMVRKGWK--PDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFV 393
Query: 544 YLILTEMYLSCGRREDAKRIF 564
L +MY C +A+++F
Sbjct: 394 KNGLIDMYAKCDSLTNARKVF 414
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 193/642 (30%), Positives = 325/642 (50%), Gaps = 29/642 (4%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
+++A LFD+M + DT WNVMI+G+ G A+ L+ +M + D FTY VI
Sbjct: 76 MEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIKS 135
Query: 62 LMQSDNVQGAKE----VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ +++ K+ V V DV NS+IS Y+ G +A +VF MP +D+VSW
Sbjct: 136 VTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSW 195
Query: 118 NLVIGALVNCQRMDLAESYFKEM---GARDVASWTIMVNGLVRE------GRIVEARKLF 168
N +I + + + FKEM G + T+ G G+ + +
Sbjct: 196 NSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVR 255
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
++ DV ++ Y G V AE +F+ + R++ +W LI + R+ A
Sbjct: 256 SRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFL 315
Query: 229 YFKQMPET--CEKTWNSIISVLIRNGLV--KEAHSYLEKYPY-SNIASWTNVIVGYFEMG 283
F++M E + ++I++L ++ + H Y + + +I T +I Y E G
Sbjct: 316 CFQKMSEQNGLQPDVITLINLLPACAILEGRTIHGYAMRRGFLPHIVLDTALIDMYGEWG 375
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
++ SA +F+ + +++ WN +I +N L+ F ++ +S PD+ T S+L
Sbjct: 376 QLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILP 435
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
++ +L GRQIHA +K T + N+++ MYA CG+++ A F+ V + D++S
Sbjct: 436 AYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVS 495
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
WNSII A HG+ ++ LF M + P+ TF +L+ACS +G+VD+G YF+ MK
Sbjct: 496 WNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMK 555
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLGACRIHN 521
+Y + P HY ++DL+GR G A + E + PT +WG+LL A R HN
Sbjct: 556 REYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIRE-----MPFLPTARIWGSLLNASRNHN 610
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
+I V E A E++ ++E +N+G Y++L MY R ED RI M+ G+ + S +
Sbjct: 611 DITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTV 670
Query: 582 QINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILFDAY 623
+ HV +GD SH + +++ +L+++ I E D+Y
Sbjct: 671 EAKSKTHVLTNGDRSHVETNKIYEVLDIVSRMIGEEEEEDSY 712
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 7/256 (2%)
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
N + T + G+ + G + A+++F+ M D VWNVMI G L E L+ + +M
Sbjct: 59 NDPALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMV 118
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
SG D+ T+ V+ + + +L+ G++IHA IK+ V N++I++Y + G
Sbjct: 119 FSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSW 178
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
A F +P DI+SWNS+I G ++L LF+ M FKPD + + L ACS
Sbjct: 179 DAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACS 238
Query: 448 YAGLVDQGRYYFDCMKNKYFLQPRSAHY-TCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
+ + G+ C + ++ T ++D+ ++G + A + I I+ +
Sbjct: 239 HVYSPNMGK-ELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCI----IQRN 293
Query: 507 PTVWGALLGACRIHNN 522
W L+G C N+
Sbjct: 294 IVAWNVLIG-CYARNS 308
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 164/383 (42%), Gaps = 60/383 (15%)
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM----HD 204
T + G G + +A +LFD+M D WN+MI G+ G A L+ +M
Sbjct: 64 TRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVK 123
Query: 205 RDLTSWKQL------INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
D ++ + I+ L ++I A + + + + NS+IS+ ++ G +A
Sbjct: 124 ADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDV--YVCNSLISLYMKLGCSWDAE 181
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
E+ P +I SW ++I GY + + G
Sbjct: 182 KVFEEMPERDIVSWNSMISGYLALED-------------------------------GFR 210
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT----VSN 374
L F +M + G PD + S L CS + + ++G+++H A+ R++ T V
Sbjct: 211 SLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAV---RSRIETGDVMVMT 267
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD-FK 433
+++ MY++ G + A F + +I++WN +I A + A F++M + +
Sbjct: 268 SILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQ 327
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
PD IT + +L AC+ + +GR + FL P T ++D+ G +G + A
Sbjct: 328 PDVITLINLLPACA----ILEGRTIHGYAMRRGFL-PHIVLDTALIDMYGEWGQLKSAEV 382
Query: 494 LLNEIRADGIEVSPTVWGALLGA 516
+ + I E + W +++ A
Sbjct: 383 IFDRI----AEKNLISWNSIIAA 401
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 88/180 (48%), Gaps = 12/180 (6%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
+++ A+ +FD++ +++ ++WN +I Y +NG +A+ LF ++ + + +T IA ++
Sbjct: 375 GQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASIL 434
Query: 64 Q--------SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
S+ Q + + + NS++ Y G +++A + F+ + LKDVV
Sbjct: 435 PAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVV 494
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNGLVREGRIVEARKLFDKM 171
SWN +I A ++ F EM A V +++ ++ G + E + F+ M
Sbjct: 495 SWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESM 554
>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 193/646 (29%), Positives = 312/646 (48%), Gaps = 80/646 (12%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGL 62
+ A LFDKM + + VT+N +I GY + LD M LF++ + D + +
Sbjct: 18 RSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGALTAC 77
Query: 63 MQSDNVQGAKEV-----------------------------------FDGMEVRDVVTWN 87
QS N+ K + FD + D V+WN
Sbjct: 78 SQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWN 137
Query: 88 SMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG-ALVNCQ------RM--DLAESYFK 138
S+I+GYV NG +E L + M + +G AL C +M + +
Sbjct: 138 SLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAI 197
Query: 139 EMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL-----DNGCV 192
++G DV T +++ + G + +A ++FD+M K+V +N M+AG L ++ C
Sbjct: 198 KLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCA 257
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A +LF +M + + L+ + I + KQ + +++ +NG
Sbjct: 258 YKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQ-----------VHALMCKNG 306
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
L+ + + I S +I Y +G + A+ F + + MIFG +
Sbjct: 307 LLSDEY----------IGSI--LIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQ 354
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N E L F ++ PD F+++++ C+++ L G QI A K+ ++FT
Sbjct: 355 NGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIF 414
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
N+ I MYA+ G++ +A L F + DI+SW+++IC A HG+A +AL FE M+
Sbjct: 415 QNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGI 474
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
+P+ F+GVL ACS+ GLV++G YFD M+ Y ++ H CVVDLLGR G + +A
Sbjct: 475 EPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAE 534
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
+L+ + G E P +W ALL ACRIH + + ++V+ELEP S Y++L +Y+
Sbjct: 535 SLILRL---GFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYM 591
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
G + A ++ M+E +KKEPG SWIQI D + F+SGD SH
Sbjct: 592 DAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHK 637
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 188/407 (46%), Gaps = 44/407 (10%)
Query: 67 NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFH-----GMPLKDVVSWNLVI 121
+ + A ++FD M ++VT+NS+ISGYV +D+ + +F G+ L +N
Sbjct: 16 DTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLD---KYNCA- 71
Query: 122 GALVNCQR---MDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAK 174
GAL C + + + + + S ++ N L+ + G++ AR LFD
Sbjct: 72 GALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL 131
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV-NSRRIDAAISYFKQM 233
D +WN +IAGY+ NG + QKMH NGL N+ + +A+
Sbjct: 132 DGVSWNSLIAGYVQNGKYEELLTILQKMHQ----------NGLAFNTYTLGSALKACSSN 181
Query: 234 PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE 293
C+ + I+ GL + ++ T ++ Y + G + AI++F+
Sbjct: 182 FNGCKMFGTMLHDHAIKLGL------------HLDVVVGTALLDMYAKTGSLDDAIQIFD 229
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEE-----GLKFFVQMKESGPSPDNATFTSVLTICSDL 348
M ++V ++N M+ GL + + E+ L F +MK G P T++S+L C +
Sbjct: 230 QMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIV 289
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
+Q+HA K + + +I +Y+ G++ ALL F+S+ I+ ++I
Sbjct: 290 EDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMI 349
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
G +G E AL LF + + KPD+ F ++S+C+ G++ G
Sbjct: 350 FGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSG 396
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 167/378 (44%), Gaps = 35/378 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ ++ A+ LFD + D V+WN +I GY +NG + + + +M + + +NT G
Sbjct: 114 KCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGL-AFNTYTLG 172
Query: 62 LMQ---SDNVQGAK---------EVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
S N G K + G+ + DVV +++ Y G +D+A+++F M
Sbjct: 173 SALKACSSNFNGCKMFGTMLHDHAIKLGLHL-DVVVGTALLDMYAKTGSLDDAIQIFDQM 231
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESY-----FKEMGARDVASWTIMVNGLVREGRIVEA 164
K+VV +N ++ L+ + ++ +Y F EM + + + L++ IVE
Sbjct: 232 VDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVED 291
Query: 165 RKLFDKMPA--------KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
K ++ A D +++I Y G + A F +H+ + +I G
Sbjct: 292 FKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFG 351
Query: 217 LVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW 272
+ + ++A+S F ++ EK +++I+S G+++ I+ +
Sbjct: 352 YLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRF 411
Query: 273 T----NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
T + I Y + G++ +A F+ M D+ W+ MI ++ E L+FF MK
Sbjct: 412 TIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKS 471
Query: 329 SGPSPDNATFTSVLTICS 346
G P++ F VL CS
Sbjct: 472 CGIEPNHFAFLGVLIACS 489
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 3/234 (1%)
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G+ SA K+F+ M+ ++ +N +I G + ++ + F + + G D L
Sbjct: 15 GDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGAL 74
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
T CS L G+ IH + ++N++I MY++CG + A + F D +
Sbjct: 75 TACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGV 134
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS--YAGLVDQGRYYFD 460
SWNS+I G +G E+ L + ++M + T L ACS + G G D
Sbjct: 135 SWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHD 194
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
K L T ++D+ + G +D+A+ + +++ + + + LL
Sbjct: 195 -HAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLL 247
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 35/225 (15%)
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CG+ +SA F + +I+++NS+I G +K + LF++ R K D G
Sbjct: 13 KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID------------ 489
L+ACS +G + G+ + Y L + ++D+ + G +D
Sbjct: 73 ALTACSQSGNLSAGKMIHGLIL-VYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL 131
Query: 490 -------------------EAMNLLNEIRADGIEVSPTVWGALLGACRIH-NNIKV-GEI 528
E + +L ++ +G+ + G+ L AC + N K+ G +
Sbjct: 132 DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTM 191
Query: 529 AGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ ++L + + V L +MY G +DA +IF QM + V
Sbjct: 192 LHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNV 236
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 125/289 (43%), Gaps = 31/289 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDN-----AMCLFNQMP----ERDM 52
+ + +A +FD+M ++ V +N M+ G + +++ A+ LF +M + M
Sbjct: 217 KTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSM 276
Query: 53 FTYNTVIAGLMQSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
FTY++++ + ++ + AK+V M + D + +I Y G + +AL F+
Sbjct: 277 FTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNS 336
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEM-----GARDVASWTIMVN----GLVREG 159
+ +V +I + + A S F E+ + TIM + G++R G
Sbjct: 337 IHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSG 396
Query: 160 RIVEARKLFDKMPAKDVQAW-NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
++ K+ + N I Y +G + A FQ+M + D+ SW +I
Sbjct: 397 EQIQGHA--TKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNA 454
Query: 219 NSRRIDAAISYFKQMPETC--EKTWNSIISVLI---RNGLVKEAHSYLE 262
A+ +F+ M ++C E + + VLI GLV+E Y +
Sbjct: 455 QHGHAMEALRFFELM-KSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFD 502
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 187/634 (29%), Positives = 313/634 (49%), Gaps = 28/634 (4%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
R+ +A +F +M +D ++W MI GY KNGF D A+ ++ M ++ + IA +
Sbjct: 347 GRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASAL 406
Query: 64 QSDNVQGAKEVFDGME--------VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+ G +V + +R VV N+++ Y + ID+A+ VF M KDVV
Sbjct: 407 AACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVV 466
Query: 116 SWNLVIGALVNCQRMDLAESYFKEM-GARDVASWTIMV-------NGLVREGRIVEARKL 167
SW+ +I R A YF+ M G S T + G +R G+ + A L
Sbjct: 467 SWSSMIAGFCFNHRSFDALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVL 526
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
+ ++ N ++ Y+ G A F ++D+ SW +++G V D A+
Sbjct: 527 RCGIGSEGYVP-NALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIAL 585
Query: 228 SYFKQMPETCEKTWNSIISVLI-----RNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFE 281
S F QM T + ++ R + + H + + N ++ Y +
Sbjct: 586 SLFNQMMYTSLGRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAK 645
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
+ AI+VF+ M +DV W+ MI G N + L +F M P++ TF +
Sbjct: 646 SKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML-GHVKPNSVTFIAA 704
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L+ C+ L G++IHA ++ V NA++ +Y +CG A +FS D+
Sbjct: 705 LSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDV 764
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
+SWN ++ G HG + AL LF +M PD++TFV ++ ACS AG+V QG F
Sbjct: 765 VSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHR 823
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
K+ + P HY C+VDLL R G + EA NL+N + I+ VWGALL CRIH
Sbjct: 824 RTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMP---IKPDAAVWGALLNGCRIHR 880
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
++++GE+A + ++ELEPN+ +++L ++Y G+ R+ M+E G++++ GCSW+
Sbjct: 881 HVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWV 940
Query: 582 QINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
++ H FL+ D SHP+ + +L+ ++ ++
Sbjct: 941 EVKGVTHAFLTDDESHPQIKEINVVLHGIYERMK 974
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 211/484 (43%), Gaps = 81/484 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTY- 55
+R I A +F KMP+RD +WNVM+ GY K GFL+ A+ L+ +M D++T+
Sbjct: 142 VRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFP 201
Query: 56 ----------------------------------NTVIAGLMQSDNVQGAKEVFDGMEVR 81
N ++ + ++ A++VFDGM +
Sbjct: 202 CVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMT 261
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF-KEM 140
D ++WN+MI+G+ N + L +F M L++ V NL+ V L+E F KEM
Sbjct: 262 DCISWNAMIAGHFENHECEAGLELFLTM-LENEVQPNLMTITSVTVASGMLSEVGFAKEM 320
Query: 141 G--------ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A DVA ++ GR+ +A K+F +M KD +W MI+GY NG
Sbjct: 321 HGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFP 380
Query: 193 GVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL 248
A +++ M + D + + R+D I ++ E + I V+
Sbjct: 381 DKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGI----KLHELAQNK-GFIRYVV 435
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+ N L LE Y S + AI+VF+ M +DV W+ MI
Sbjct: 436 VANAL-------LEMYAKSK---------------HIDKAIEVFKFMAEKDVVSWSSMIA 473
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
G N + L +F M P++ TF + L+ C+ L G++IHA ++
Sbjct: 474 GFCFNHRSFDALYYFRYML-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGS 532
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
V NA++ +Y +CG A +FS D++SWN ++ G HG + AL LF +M
Sbjct: 533 EGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMM 592
Query: 429 LTDF 432
T
Sbjct: 593 YTSL 596
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 195/411 (47%), Gaps = 36/411 (8%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL---- 111
N +++ L++ + A VF M RDV +WN M+ GY G ++EAL +++ M
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 112 KDVVSWNLVI---GALVNCQRMDLAESYFKEMGARD-VASWTIMVNGLVREGRIVEARKL 167
DV ++ V+ G + + + ++ G D V +V + G IV ARK+
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
FD M D +WN MIAG+ +N +LF M + ++
Sbjct: 255 FDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQ------------------- 295
Query: 228 SYFKQMPETCEKTWNSIISVLIRN-GLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEV 285
P T ++ S ++ G KE H + K ++ ++A ++I Y +G +
Sbjct: 296 ------PNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRM 349
Query: 286 GSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
G A K+F M T+D W MI G +N ++ L+ + M+ +PD+ T S L C
Sbjct: 350 GDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAAC 409
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWN 405
+ L LD+G ++H A ++ V+NA++ MYA+ +I A+ F + D++SW+
Sbjct: 410 ACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWS 469
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
S+I G ++ + AL F M L KP+ +TF+ LSAC+ G + G+
Sbjct: 470 SMIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGK 519
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 149/306 (48%), Gaps = 8/306 (2%)
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS-YF 230
P+ ++ N M++ + G + A +F KM +RD+ SW ++ G ++ A+ Y+
Sbjct: 127 PSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYY 186
Query: 231 KQMPETCEKTWNSIISVLIRNGLV------KEAHSYLEKYPYSNIASWTNVIVG-YFEMG 283
+ + + VL G + +E H+++ ++ + + N +V Y + G
Sbjct: 187 RMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCG 246
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
++ +A KVF+ M D WN MI G EN E GL+ F+ M E+ P+ T TSV
Sbjct: 247 DIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTV 306
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
L + +++H A+K N++I MY G + A FS + D +S
Sbjct: 307 ASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMS 366
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
W ++I G +G+ +KALE++ M L + PDD+T L+AC+ G +D G + +
Sbjct: 367 WTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQ 426
Query: 464 NKYFLQ 469
NK F++
Sbjct: 427 NKGFIR 432
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 328 ESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
ES P PD + ++ +C +D G + A+A + + NAM++M R G I
Sbjct: 88 ESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEI 147
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
A F+ +P D+ SWN ++ G G+ E+AL+L+ RM +PD TF VL C
Sbjct: 148 WHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTC 207
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 192/666 (28%), Positives = 324/666 (48%), Gaps = 84/666 (12%)
Query: 7 QEAQNLFDKM-PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYNT-- 57
++A ++F M RD ++W+ M+ + N A+ F M P F T
Sbjct: 118 EKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRA 177
Query: 58 -----------------VIAGLMQSDNVQG----------------AKEVFDGMEVRDVV 84
+ G +QSD G A +VF+ M R+ V
Sbjct: 178 CSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAV 237
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFKEM 140
TW MI+ + G EA+ +F M D + + VI A N + + L + +
Sbjct: 238 TWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQA 297
Query: 141 GAR----DVASWTIMVNGLVR---EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
D ++N + +G + ARK+FD++ +V +W MI GY+ G G
Sbjct: 298 IRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKG--G 355
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
E+ L G++ + I + F + C +R G
Sbjct: 356 YDEEALD------------LFRGMILTHVIPNHFT-FSSTLKACANL------AALRIG- 395
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
++ ++ K +S++ N ++ Y G + A K F+++ +++ +N +I +
Sbjct: 396 -EQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAK 454
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N EE L+ F ++++ G TF S+L+ + + T+ G QIHA+ IK +V
Sbjct: 455 NLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSV 514
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
NA+I+MY+RCGNI+SA F + ++ISW SII G A HG+A +ALELF +M
Sbjct: 515 CNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGV 574
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
+P+++T++ VLSACS+ GLV++G +F M ++ + PR HY C+VD+LGR G + EA+
Sbjct: 575 RPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAI 634
Query: 493 NLLNEI--RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
+N + +AD + VW LGACR+H N+++G+ A + ++E EP++ Y++L+ +
Sbjct: 635 QFINSMPYKADAL-----VWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNL 689
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
Y S + ++ I MKE + KE GCSW+++ + H F GD+SHPK + L L
Sbjct: 690 YASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNL 749
Query: 611 HTEIER 616
+I++
Sbjct: 750 SVKIKK 755
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 51/234 (21%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
R+ RI +A+ FD + +++ +++N +I Y KN + A+ LFN++ ++ M FT+ +
Sbjct: 423 RSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFAS 482
Query: 58 VIAG-----------------------LMQS------------DNVQGAKEVFDGMEVRD 82
+++G L QS N++ A +VF+ ME R+
Sbjct: 483 LLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRN 542
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNCQRMDLAE---SYF 137
V++W S+I+G+ +G +AL +FH M L++ V N V I L C + L +F
Sbjct: 543 VISWTSIITGFAKHGFATQALELFHKM-LEEGVRPNEVTYIAVLSACSHVGLVNEGWKHF 601
Query: 138 KEMGARD-----VASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAG 185
K M + + +V+ L R G + EA + + MP K D W +
Sbjct: 602 KSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGA 655
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 111/285 (38%), Gaps = 37/285 (12%)
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
M G PD T++ L C + D+G +H + + + N++I++Y++CG
Sbjct: 56 HMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCG 115
Query: 385 NIQSALLEFSSV-PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
+ A F + D+ISW++++ A + +AL F M + P++ F
Sbjct: 116 QWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAAT 175
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQP--------------------------------R 471
ACS A V G F + +LQ
Sbjct: 176 RACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERN 235
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAG 530
+ +T ++ L +FG EA++L ++ G E ++ AC + +G ++
Sbjct: 236 AVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHS 295
Query: 531 ERVMELEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKENGV 572
+ + + V L MY C G A++IF Q+ ++ V
Sbjct: 296 QAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV 340
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
R I+ A +F+ M R+ ++W +I G+ K+GF A+ LF++M E + TY
Sbjct: 524 RCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIA 583
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
V++ V + F M V + Y C +G + EA++ + MP
Sbjct: 584 VLSACSHVGLVNEGWKHFKSMYTEHGVI--PRMEHYACIVDILGRSGSLSEAIQFINSMP 641
Query: 111 LK-DVVSWNLVIGALVNCQRMDLAESYFK---EMGARDVASWTIMVN 153
K D + W +GA ++L + K E D A++ ++ N
Sbjct: 642 YKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSN 688
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 198/668 (29%), Positives = 319/668 (47%), Gaps = 79/668 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER----- 50
R A + A LF++ P + WN ++R YF G + LF+QM ER
Sbjct: 48 RYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYT 107
Query: 51 ------------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
DMF + +I + + A +VF
Sbjct: 108 VSIALKSCSGLQKLELGKMIHGFLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPK 167
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNCQRM---DLAES 135
DVV W S+I+GY NG + AL F M + + VS + V + A C ++ +L S
Sbjct: 168 PDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRS 227
Query: 136 YFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
+ R + + N ++ + G I A LF +MP KD+ +W+ M+A Y DNG
Sbjct: 228 VHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGA 287
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN 251
A +LF +M D+ + +N + +A+ C + N +
Sbjct: 288 ETNALNLFNEMIDKRIE---------LNRVTVISAL-------RACASSSN------LEE 325
Query: 252 GLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
G K+ H Y + +I T ++ Y + +AI++F M +DV W V+ G
Sbjct: 326 G--KQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGY 383
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
E + + L F M +G PD +L S+L + +HA K +
Sbjct: 384 AEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNE 443
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RL 429
+ ++I +YA+C +I +A F + D+++W+SII +HG E+AL+L +M
Sbjct: 444 FIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNH 503
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+D KP+D+TFV +LSACS+AGL+++G F M N+Y L P HY +VDLLGR G +D
Sbjct: 504 SDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELD 563
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
+A++++N + ++ P VWGALLGACRIH NIK+GE+A + L+PN++G Y +L+
Sbjct: 564 KALDMINNM---PMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSN 620
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNL 609
+Y DA ++ +KEN +KK G S ++I + H F++ D H + ++ +L
Sbjct: 621 IYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYEMLRK 680
Query: 610 LHTEIERE 617
L + E
Sbjct: 681 LDARMREE 688
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 145/341 (42%), Gaps = 48/341 (14%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
T + V Y + A K+FE + V +WN ++ E L F QM +
Sbjct: 40 TKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVT 99
Query: 333 ---PDNATFTSVLTICSDLPTLDLGRQIHA-QAIKIARNQFTTVSNAMITMYARCGNIQS 388
PDN T + L CS L L+LG+ IH KI + F V +A+I +Y++CG +
Sbjct: 100 EERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKIDSDMF--VGSALIELYSKCGQMND 157
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSACS 447
A+ F+ P D++ W SII G +G E AL F RM L PD +T V SAC+
Sbjct: 158 AVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACA 217
Query: 448 YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI------------------- 488
+ GR +K + F + +++L G+ G I
Sbjct: 218 QLSDFNLGRSVHGFVKRRGF-DTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWS 276
Query: 489 ------------DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
A+NL NE+ IE++ + L AC +N++ G+++ +L
Sbjct: 277 SMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLE----EGKQIHKL 332
Query: 537 EPN-----NSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
N + V L +MYL C E+A +F +M + V
Sbjct: 333 AVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDV 373
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
T CS + Q+H+Q +K+ + V + +YAR ++ A F P +
Sbjct: 13 TCCSKISI----TQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVY 68
Query: 403 SWNSIICGLAYHGYAEKALELFERMR---LTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
WN+++ G + L LF +M +T+ +PD+ T L +CS ++ G+
Sbjct: 69 LWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIH 128
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
+K K + + +++L + G +++A+ + E
Sbjct: 129 GFLKKK--IDSDMFVGSALIELYSKCGQMNDAVKVFTE 164
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 194/666 (29%), Positives = 324/666 (48%), Gaps = 84/666 (12%)
Query: 7 QEAQNLFDKM-PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYNT-- 57
++A ++F M RD ++W+ M+ + N A+ F M P F T
Sbjct: 118 EKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRA 177
Query: 58 -----------------VIAGLMQSDNVQG----------------AKEVFDGMEVRDVV 84
V G +QSD G A +VF+ M R+ V
Sbjct: 178 CSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAV 237
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFKEM 140
TW MI+ + G EA+ +F M L D + + VI A N + + L + +
Sbjct: 238 TWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQA 297
Query: 141 GAR----DVASWTIMVNGLVR---EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
D ++N + +G + ARK+FD++ +V +W MI GY+ G G
Sbjct: 298 IRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKG--G 355
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
E+ L G++ + I + F + C +R G
Sbjct: 356 YDEEALD------------LFRGMILTHVIPNHFT-FSSTLKACANL------AALRIG- 395
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
++ ++ K +S++ N ++ Y G + A K F+++ +++ +N +I +
Sbjct: 396 -EQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAK 454
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N EE L+ F ++++ G TF S+L+ + + T+ G QIHA+ IK +V
Sbjct: 455 NLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSV 514
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
NA+I+MY+RCGNI+SA F + ++ISW SII G A HG+A +ALELF +M
Sbjct: 515 CNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGV 574
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
+P+ +T++ VLSACS+ GLV++G +F M ++ + PR HY C+VD+LGR G + EA+
Sbjct: 575 RPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAI 634
Query: 493 NLLNEI--RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
+N + +AD + VW LGACR+H N+++G+ A + ++E EP++ Y++L+ +
Sbjct: 635 QFINSMPYKADAL-----VWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNL 689
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
Y S + ++ I MKE + KE GCSW+++ + H F GD+SHPK + L L
Sbjct: 690 YASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNL 749
Query: 611 HTEIER 616
+I++
Sbjct: 750 SVKIKK 755
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 130/287 (45%), Gaps = 54/287 (18%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
R+ RI +A+ FD + +++ +++N +I Y KN + A+ LFN++ ++ M FT+ +
Sbjct: 423 RSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFAS 482
Query: 58 VIAG-----------------------LMQS------------DNVQGAKEVFDGMEVRD 82
+++G L QS N++ A +VF+ ME R+
Sbjct: 483 LLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRN 542
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNCQRMDLAE---SYF 137
V++W S+I+G+ +G +AL +FH M L++ V NLV I L C + L +F
Sbjct: 543 VISWTSIITGFAKHGFATQALELFHKM-LEEGVRPNLVTYIAVLSACSHVGLVNEGWKHF 601
Query: 138 KEMGARD-----VASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGC 191
K M + + MV+ L R G + EA + + MP K D W + +G
Sbjct: 602 KSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGN 661
Query: 192 VGV---AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
+ + A + + D ++ L N ++ + D + K M E
Sbjct: 662 LELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKE 708
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 111/285 (38%), Gaps = 37/285 (12%)
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
M G PD T++ L C + D+G +H + + + N++I++Y++CG
Sbjct: 56 HMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCG 115
Query: 385 NIQSALLEFSSV-PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
+ A F + D+ISW++++ A + +AL F M + P++ F
Sbjct: 116 QWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAAT 175
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQP--------------------------------R 471
ACS A V G F + +LQ
Sbjct: 176 RACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERN 235
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAG 530
+ +T ++ L +FG EA++L E+ G E ++ AC + +G ++
Sbjct: 236 AVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHS 295
Query: 531 ERVMELEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKENGV 572
+ + + V L MY C G A++IF Q+ ++ V
Sbjct: 296 QAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV 340
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 256/455 (56%), Gaps = 12/455 (2%)
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
T +V+ R GR+ +AR++FD++ KD Q +N MIA Y++ G V +AE+LF+ M +R+
Sbjct: 143 TTLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAYMEAGEVELAEELFEVMPERNTH 202
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEKTW-NSIISVLIRNGLVKEAHSYLEKYPYS 267
+ +++ G +D+A F+ ++IS + G V +A S +
Sbjct: 203 TLMEMVGGYSARGDMDSAKHVFEMANGVVNMVLCTAMISGFAKTGSVDDARSVFDGMRQR 262
Query: 268 NIASWTNVIVG--YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
++A+W NV++G Y + G V A KVF+ M R+V W MI G + ++ +K F
Sbjct: 263 DVATW-NVMIGVMYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQAVKLFRD 321
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ SG D+AT +V++ C + LDLGR +HA + +V N++I MY++CG+
Sbjct: 322 MQISGVKADDATIATVVSSCGQMGALDLGRYVHAYCDVHGLGKGISVKNSLIDMYSKCGD 381
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT-DFKPDDITFVGVLS 444
I+ A F + D SW +I G A +G + +AL+LF +M + P++ITF+GVL+
Sbjct: 382 IKKAHEIFRGLVKRDDFSWTVMIMGFAVNGLSGEALDLFAQMEEEGEVMPNEITFLGVLT 441
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
+CS+ GLV+QG ++F M Y + PR HY C+VDLLGR L+ EA + E +
Sbjct: 442 SCSHGGLVEQGYHHFHRMSKVYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIEE-----MP 496
Query: 505 VSP--TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
++P +W +LL ACR + + E ERV ELEP+ G ++L+ +Y + R D +
Sbjct: 497 IAPDVAIWRSLLFACRARGEVGLAEYVAERVEELEPSRCGGNVLLSNVYATTSRWVDVNK 556
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
+ M + V K PGCS I++N H FLSGD +H
Sbjct: 557 VRTGMGRSRVSKRPGCSVIEVNGCAHEFLSGDETH 591
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 187/431 (43%), Gaps = 34/431 (7%)
Query: 11 NLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQG 70
++F Q D ++ Y + G LD+A +F+++ +D YNT+IA M++ V+
Sbjct: 129 HVFKNGFQTDERIATTLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAYMEAGEVEL 188
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFH-GMPLKDVVSWNLVIGALVNCQR 129
A+E+F+ M R+ T M+ GY G +D A VF + ++V +I
Sbjct: 189 AEELFEVMPERNTHTLMEMVGGYSARGDMDSAKHVFEMANGVVNMVLCTAMISGFAKTGS 248
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVE-ARKLFDKMPAKDVQAWNLMIAGYLD 188
+D A S F M RDVA+W +M+ + + +VE ARK+FD MP ++V W MI+GY
Sbjct: 249 VDDARSVFDGMRQRDVATWNVMIGVMYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQ 308
Query: 189 NGCVGVAEDLFQKMHDRDLTSWKQLINGL-VNSRRIDAAISYFKQMPETCEKTWNSIISV 247
G A LF+ M I+G+ + I +S QM
Sbjct: 309 VGKFKQAVKLFRDMQ----------ISGVKADDATIATVVSSCGQMGAL----------- 347
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVM 306
L + H+Y + + S N ++ Y + G++ A ++F + RD W VM
Sbjct: 348 ----DLGRYVHAYCDVHGLGKGISVKNSLIDMYSKCGDIKKAHEIFRGLVKRDDFSWTVM 403
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPS-PDNATFTSVLTICSDLPTLDLG-RQIHAQAIKI 364
I G N L E L F QM+E G P+ TF VLT CS ++ G H +
Sbjct: 404 IMGFAVNGLSGEALDLFAQMEEEGEVMPNEITFLGVLTSCSHGGLVEQGYHHFHRMSKVY 463
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALEL 423
M+ + R + A +PI D+ W S++ A E L
Sbjct: 464 GIAPRIEHYGCMVDLLGRAKLLAEAEQFIEEMPIAPDVAIWRSLL--FACRARGEVGLAE 521
Query: 424 FERMRLTDFKP 434
+ R+ + +P
Sbjct: 522 YVAERVEELEP 532
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 157/345 (45%), Gaps = 52/345 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-RDMFTYNTVI 59
M ++ A+ LF+ MP+R+T T M+ GY G +D+A +F +M +I
Sbjct: 181 MEAGEVELAEELFEVMPERNTHTLMEMVGGYSARGDMDSAKHVFEMANGVVNMVLCTAMI 240
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMIS-GYVCNGLIDEALRVFHGMPLKDVVSWN 118
+G ++ +V A+ VFDGM RDV TWN MI Y GL+++A +VF MP ++VV W
Sbjct: 241 SGFAKTGSVDDARSVFDGMRQRDVATWNVMIGVMYAKCGLVEDARKVFDAMPERNVVCWT 300
Query: 119 LVIGALVNCQRMDLAESYFK----------------------EMGARDVASWTIM---VN 153
+I + A F+ +MGA D+ + V+
Sbjct: 301 SMISGYTQVGKFKQAVKLFRDMQISGVKADDATIATVVSSCGQMGALDLGRYVHAYCDVH 360
Query: 154 GLVRE--------------GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
GL + G I +A ++F + +D +W +MI G+ NG G A DLF
Sbjct: 361 GLGKGISVKNSLIDMYSKCGDIKKAHEIFRGLVKRDDFSWTVMIMGFAVNGLSGEALDLF 420
Query: 200 QKMHDR-----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCE-----KTWNSIISVLI 249
+M + + ++ ++ + ++ +F +M + + + ++ +L
Sbjct: 421 AQMEEEGEVMPNEITFLGVLTSCSHGGLVEQGYHHFHRMSKVYGIAPRIEHYGCMVDLLG 480
Query: 250 RNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFE 293
R L+ EA ++E+ P + ++A W +++ GEVG A V E
Sbjct: 481 RAKLLAEAEQFIEEMPIAPDVAIWRSLLFACRARGEVGLAEYVAE 525
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 111/233 (47%), Gaps = 10/233 (4%)
Query: 227 ISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVG 286
+ FK +T E+ +++ + R G + +A ++ + + +I Y E GEV
Sbjct: 128 VHVFKNGFQTDERIATTLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAYMEAGEVE 187
Query: 287 SAIKVFELMTTRDVTVWNVMIFGL-GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTIC 345
A ++FE+M R+ M+ G D+ + K +M + + T++++
Sbjct: 188 LAEELFEVMPERNTHTLMEMVGGYSARGDM--DSAKHVFEM--ANGVVNMVLCTAMISGF 243
Query: 346 SDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI-TMYARCGNIQSALLEFSSVPIHDIISW 404
+ ++D R + R + N MI MYA+CG ++ A F ++P +++ W
Sbjct: 244 AKTGSVDDARSV----FDGMRQRDVATWNVMIGVMYAKCGLVEDARKVFDAMPERNVVCW 299
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
S+I G G ++A++LF M+++ K DD T V+S+C G +D GRY
Sbjct: 300 TSMISGYTQVGKFKQAVKLFRDMQISGVKADDATIATVVSSCGQMGALDLGRY 352
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 116/271 (42%), Gaps = 24/271 (8%)
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFT--SVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
G + + + + QM P TFT SVL + L G Q+H + + +N
Sbjct: 78 GSSAAARDAVALYAQMHRGCPGVRPLTFTVSSVLKAAARREMLREGEQVH---VHVFKNG 134
Query: 369 FTT---VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
F T ++ ++ +YARCG + A F + + D +N++I G E A ELFE
Sbjct: 135 FQTDERIATTLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAYMEAGEVELAEELFE 194
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRF 485
M + + T + ++ S G +D ++ F+ M N T ++ +
Sbjct: 195 VMP----ERNTHTLMEMVGGYSARGDMDSAKHVFE-MANGVV---NMVLCTAMISGFAKT 246
Query: 486 GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGV-Y 544
G +D+A ++ + +R + + G + C + + + +V + P + V +
Sbjct: 247 GSVDDARSVFDGMRQRDVATWNVMIGVMYAKCGLVEDAR-------KVFDAMPERNVVCW 299
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
+ Y G+ + A ++F M+ +GVK +
Sbjct: 300 TSMISGYTQVGKFKQAVKLFRDMQISGVKAD 330
>gi|334184919|ref|NP_182060.2| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
gi|218546767|sp|O22137.2|PP202_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g45350, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 4; Flags: Precursor
gi|330255448|gb|AEC10542.1| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
Length = 613
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 282/532 (53%), Gaps = 29/532 (5%)
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVNCQRMDLA 133
EV D WN++I + +AL + +G+ + D S +LV+ A C R+
Sbjct: 82 EVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSV-DKFSLSLVLKA---CSRLGFV 137
Query: 134 ES------YFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
+ + K+ G D+ ++ ++ G + +R++FD+MP +D ++N MI GY
Sbjct: 138 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
Query: 187 LDNGCVGVAEDLFQ--KMHDRDLTSWKQLINGLV-NSRRIDAAISYFKQMPETCEKTWNS 243
+ G + A +LF M ++L SW +I+G S +D A F MPE +WNS
Sbjct: 198 VKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNS 257
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+I +++G +++A + P ++ +W +I GY ++G V A +F+ M RDV +
Sbjct: 258 MIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAY 317
Query: 304 NVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
N M+ G +N E L+ F M KES PD+ T VL + L L +H +
Sbjct: 318 NSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMH---L 374
Query: 363 KIARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
I QF + A+I MY++CG+IQ A+L F + I WN++I GLA HG E
Sbjct: 375 YIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGES 434
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A ++ ++ KPDDITFVGVL+ACS++GLV +G F+ M+ K+ ++PR HY C+V
Sbjct: 435 AFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMV 494
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
D+L R G I+ A NL+ E+ +E + +W L AC H + GE+ + ++
Sbjct: 495 DILSRSGSIELAKNLIEEMP---VEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGY 551
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
N Y++L+ MY S G +D +R+ MKE ++K PGCSWI+++ H F
Sbjct: 552 NPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFF 603
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 208/420 (49%), Gaps = 32/420 (7%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGLMQSDNVQGAKEVF 75
D + +++++ + GF+ M + + + D+F N +I ++ + ++++F
Sbjct: 120 DKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMF 179
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWNLVI-GALVNCQRMDL 132
D M RD V++NSMI GYV GLI A +F MP +K+++SWN +I G +D+
Sbjct: 180 DRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDI 239
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A F +M +D+ SW M++G V+ GRI +A+ LFD MP +DV W MI GY G V
Sbjct: 240 ASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFV 299
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSIISV 247
A+ LF +M RD+ ++ ++ G V ++ A+ F M + + T ++
Sbjct: 300 HHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPA 359
Query: 248 LIRNGLVKEA---HSYL-EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+ + G + +A H Y+ EK Y +I Y + G + A+ VFE + + + W
Sbjct: 360 IAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHW 419
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLGRQ 356
N MI GL + LGE +Q++ PD+ TF VL CS L +L R+
Sbjct: 420 NAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRR 479
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYH 414
H ++ M+ + +R G+I+ A L+E V +D+I W + + ++H
Sbjct: 480 KHKIEPRLQH------YGCMVDILSRSGSIELAKNLIEEMPVEPNDVI-WRTFLTACSHH 532
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 190/397 (47%), Gaps = 25/397 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTVIAGLMQ-S 65
++ +FD+MP+RD+V++N MI GY K G + +A LF+ MP +++ ++N++I+G Q S
Sbjct: 175 SRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTS 234
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D V A ++F M +D+++WNSMI GYV +G I++A +F MP +DVV+W +I
Sbjct: 235 DGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYA 294
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK-----DVQAWN 180
+ A++ F +M RDV ++ M+ G V+ +EA ++F M + D
Sbjct: 295 KLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLV 354
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN----SRRIDAAISYFKQMPET 236
+++ G + A D+ + ++ +L L++ I A+ F+ +
Sbjct: 355 IVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK 414
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYFEMGEVGSAIKVF 292
WN++I L +GL + A L + ++ ++ V+ G V + F
Sbjct: 415 SIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCF 474
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEG-LKFFVQMKESGP-SPDNATFTSVLTICSDLPT 350
ELM + + +G + L G ++ + E P P++ + + LT CS
Sbjct: 475 ELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKE 534
Query: 351 LDLGRQIHAQAIKIA---RNQFTTVSNAMITMYARCG 384
+ G + I A + + +SN MYA G
Sbjct: 535 FETGELVAKHLILQAGYNPSSYVLLSN----MYASFG 567
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 59/138 (42%)
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F D +WN +I + L M E+G S D + + VL CS L +
Sbjct: 78 FSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 137
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
G QIH K + N +I +Y +CG + + F +P D +S+NS+I G
Sbjct: 138 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
Query: 412 AYHGYAEKALELFERMRL 429
G A ELF+ M +
Sbjct: 198 VKCGLIVSARELFDLMPM 215
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 190/628 (30%), Positives = 322/628 (51%), Gaps = 38/628 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+ +++A+ FD M R V+W +MI GY +NG ++A+ ++ QM D T+ +
Sbjct: 127 KCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGS 186
Query: 58 VIAGLMQSDNV----QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+I + ++ Q V ++ N++IS Y G I A VF + KD
Sbjct: 187 IIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKD 246
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFD 169
++SW +I A F++M + V + G V R E +
Sbjct: 247 LISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQ 306
Query: 170 KMPAK-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
M AK +V A + Y G + A+ F ++ DL SW +I L NS ++
Sbjct: 307 GMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSD-VN 365
Query: 225 AAISYFKQM------PETCEKTWNSII-----SVLIRNGLVKEAHSYLEKYPYSNIASWT 273
AI +F QM P+ + T+ +++ + + G+ + HSY+ K +A+
Sbjct: 366 EAIYFFCQMIHMGLMPD--DITFLNLLCACGSPMTLNQGM--QIHSYIIKMGLDKVAAVC 421
Query: 274 N-VIVGYFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
N ++ Y + + A VF+ ++ ++ WN ++ ++ E + F M S
Sbjct: 422 NSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSEN 481
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
PDN T T++L C++L +L++G Q+H ++K +VSN +I MYA+CG ++ A
Sbjct: 482 KPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARY 541
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F S DI+SW+S+I G A G ++AL LF MR +P+++T++GVLSACS+ GL
Sbjct: 542 VFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGL 601
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
V++G + ++ M+ + + P H +C+VDLL R G + EA N I+ G + T+W
Sbjct: 602 VEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENF---IKKTGFDPDITMWK 658
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
LL +C+ H N+ + E A E +++L+P+NS ++L+ ++ S G ++ R+ MK+ G
Sbjct: 659 TLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMG 718
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPK 599
V+K PG SWI++ D HVF S DSSHP+
Sbjct: 719 VQKVPGQSWIEVKDQIHVFFSEDSSHPQ 746
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 110/239 (46%), Gaps = 6/239 (2%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G + A K F+ M R V W +MI G +N + + ++QM SG PD TF
Sbjct: 125 YGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTF 184
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
S++ C +DLG Q+H IK + NA+I+MY + G I A F+ +
Sbjct: 185 GSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMIST 244
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
D+ISW S+I G GY +AL LF M R ++P++ F V SAC + GR
Sbjct: 245 KDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGR- 303
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
M K+ L + D+ +FG + A +I + + W A++ A
Sbjct: 304 QIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDL----VSWNAIIAA 358
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F +K S + +T+ +++ C+++ +L G++IH +K + N ++ MY
Sbjct: 67 FNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYG 126
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CG+++ A F ++ + ++SW +I G + +G A+ ++ +M + + PD +TF
Sbjct: 127 KCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGS 186
Query: 442 VLSACSYAGLVD-QGRYYFDCMKNKY--FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
++ AC AG +D G+ + +K+ Y L ++A ++ + +FG I A ++ I
Sbjct: 187 IIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNA----LISMYTKFGQIAHASDVFTMI 242
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 184/605 (30%), Positives = 313/605 (51%), Gaps = 36/605 (5%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYN-TVIAGLMQSDN 67
A+ +FD M Q + WN MIRGY +A+ +F +M R + N T+ A + S
Sbjct: 71 ARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAA 130
Query: 68 VQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
G K +G + DV + +++ Y ++EA +VF M +DVVSW
Sbjct: 131 FAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSW 190
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPA 173
+I A C D EM A + + + L+ + + E R +++++
Sbjct: 191 TSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK 250
Query: 174 ----KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
DV N +I+ Y GC+ A + FQ M R SW LI+G V + A+
Sbjct: 251 FGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRI 310
Query: 230 FKQM------PETCEKTWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-Y 279
F++M P+ T S++S + G +++ HSY++ TN ++ Y
Sbjct: 311 FEEMLLHGVTPDGI--TLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMY 368
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G++ +A +VF+ MT +DV W VM+ G + F +MK +
Sbjct: 369 AKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALV 428
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
S+L+ CS L LD GR+IH+ ++ + + +A++ MYA+CG I +A F +
Sbjct: 429 SLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHK 488
Query: 400 DIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
+SWN++I GLA +GY ++A+ELF++M L D KPD IT VL AC++ G+VD+G Y
Sbjct: 489 QTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRY 548
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F M + + P + HY C+VDLLGR G++DEA + + ++ IE +P +WG+LL ACR
Sbjct: 549 FYLMSSLGVV-PDTEHYGCIVDLLGRAGMLDEAFHFIKKMP---IEPNPVIWGSLLAACR 604
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
+H+ + +G++ G+ ++ + PN+ GV+++++ ++ + +D + + M G++K PG
Sbjct: 605 VHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGH 664
Query: 579 SWIQI 583
S +Q+
Sbjct: 665 SSVQV 669
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 189/436 (43%), Gaps = 28/436 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM-- 63
++EA +F++M +RD V+W MI + G D + + ++M + I L+
Sbjct: 172 VEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSA 231
Query: 64 --QSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
Q+ V + V++ G+E DV N++IS Y G + +AL F MP + S
Sbjct: 232 CGQTQAVDEGRWVYNQVGKFGIEA-DVDIRNALISMYTKCGCLSDALEAFQAMPARYTKS 290
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTI-MVNGLVREGRIVEARK-------LF 168
WN +I V A F+EM V I +V+ L ++ E RK +
Sbjct: 291 WNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIK 350
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
D D N +I Y G + AE +FQ M +D+ SW ++ G V + A +
Sbjct: 351 DNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFN 410
Query: 229 YFKQMP----ETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YF 280
F++M E S++S + G + +E HSY+E+ + + +V Y
Sbjct: 411 LFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYA 470
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE-SGPSPDNATFT 339
+ G + +A ++F M + WN MI GL N G+E ++ F QM E P PD T
Sbjct: 471 KCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLK 530
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
+VL C+ + +D G + + T ++ + R G + A +PI
Sbjct: 531 AVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIE 590
Query: 400 -DIISWNSIICGLAYH 414
+ + W S++ H
Sbjct: 591 PNPVIWGSLLAACRVH 606
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVIA 60
I A +F KM + T++WN MI G NG+ A+ LF+QM P+ D T V+
Sbjct: 475 IDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLG 534
Query: 61 GLMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-DVV 115
V F M V D + ++ G++DEA MP++ + V
Sbjct: 535 ACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPV 594
Query: 116 SWNLVIGALVNCQRMDLAE 134
W ++ A RMDL +
Sbjct: 595 IWGSLLAACRVHHRMDLGK 613
>gi|2583119|gb|AAB82628.1| hypothetical protein [Arabidopsis thaliana]
Length = 606
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 282/532 (53%), Gaps = 29/532 (5%)
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVNCQRMDLA 133
EV D WN++I + +AL + +G+ + D S +LV+ A C R+
Sbjct: 75 EVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSV-DKFSLSLVLKA---CSRLGFV 130
Query: 134 ES------YFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
+ + K+ G D+ ++ ++ G + +R++FD+MP +D ++N MI GY
Sbjct: 131 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 190
Query: 187 LDNGCVGVAEDLFQ--KMHDRDLTSWKQLINGLV-NSRRIDAAISYFKQMPETCEKTWNS 243
+ G + A +LF M ++L SW +I+G S +D A F MPE +WNS
Sbjct: 191 VKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNS 250
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+I +++G +++A + P ++ +W +I GY ++G V A +F+ M RDV +
Sbjct: 251 MIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAY 310
Query: 304 NVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
N M+ G +N E L+ F M KES PD+ T VL + L L +H +
Sbjct: 311 NSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMH---L 367
Query: 363 KIARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
I QF + A+I MY++CG+IQ A+L F + I WN++I GLA HG E
Sbjct: 368 YIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGES 427
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A ++ ++ KPDDITFVGVL+ACS++GLV +G F+ M+ K+ ++PR HY C+V
Sbjct: 428 AFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMV 487
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
D+L R G I+ A NL+ E+ +E + +W L AC H + GE+ + ++
Sbjct: 488 DILSRSGSIELAKNLIEEMP---VEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGY 544
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
N Y++L+ MY S G +D +R+ MKE ++K PGCSWI+++ H F
Sbjct: 545 NPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFF 596
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 208/420 (49%), Gaps = 32/420 (7%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGLMQSDNVQGAKEVF 75
D + +++++ + GF+ M + + + D+F N +I ++ + ++++F
Sbjct: 113 DKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMF 172
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWNLVI-GALVNCQRMDL 132
D M RD V++NSMI GYV GLI A +F MP +K+++SWN +I G +D+
Sbjct: 173 DRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDI 232
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A F +M +D+ SW M++G V+ GRI +A+ LFD MP +DV W MI GY G V
Sbjct: 233 ASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFV 292
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSIISV 247
A+ LF +M RD+ ++ ++ G V ++ A+ F M + + T ++
Sbjct: 293 HHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPA 352
Query: 248 LIRNGLVKEA---HSYL-EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+ + G + +A H Y+ EK Y +I Y + G + A+ VFE + + + W
Sbjct: 353 IAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHW 412
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLGRQ 356
N MI GL + LGE +Q++ PD+ TF VL CS L +L R+
Sbjct: 413 NAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRR 472
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYH 414
H ++ M+ + +R G+I+ A L+E V +D+I W + + ++H
Sbjct: 473 KHKIEPRLQH------YGCMVDILSRSGSIELAKNLIEEMPVEPNDVI-WRTFLTACSHH 525
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 190/397 (47%), Gaps = 25/397 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTVIAGLMQ-S 65
++ +FD+MP+RD+V++N MI GY K G + +A LF+ MP +++ ++N++I+G Q S
Sbjct: 168 SRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTS 227
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D V A ++F M +D+++WNSMI GYV +G I++A +F MP +DVV+W +I
Sbjct: 228 DGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYA 287
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK-----DVQAWN 180
+ A++ F +M RDV ++ M+ G V+ +EA ++F M + D
Sbjct: 288 KLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLV 347
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN----SRRIDAAISYFKQMPET 236
+++ G + A D+ + ++ +L L++ I A+ F+ +
Sbjct: 348 IVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK 407
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYFEMGEVGSAIKVF 292
WN++I L +GL + A L + ++ ++ V+ G V + F
Sbjct: 408 SIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCF 467
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEG-LKFFVQMKESGP-SPDNATFTSVLTICSDLPT 350
ELM + + +G + L G ++ + E P P++ + + LT CS
Sbjct: 468 ELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKE 527
Query: 351 LDLGRQIHAQAIKIA---RNQFTTVSNAMITMYARCG 384
+ G + I A + + +SN MYA G
Sbjct: 528 FETGELVAKHLILQAGYNPSSYVLLSN----MYASFG 560
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 59/138 (42%)
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F D +WN +I + L M E+G S D + + VL CS L +
Sbjct: 71 FSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 130
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
G QIH K + N +I +Y +CG + + F +P D +S+NS+I G
Sbjct: 131 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 190
Query: 412 AYHGYAEKALELFERMRL 429
G A ELF+ M +
Sbjct: 191 VKCGLIVSARELFDLMPM 208
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 191/646 (29%), Positives = 327/646 (50%), Gaps = 83/646 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVIA 60
+ + LF+K+ + D +NV+IRG+ NG +++ L+ + + D FTY I+
Sbjct: 62 VAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAIS 121
Query: 61 G-----------LMQSDNV------------------------QGAKEVFDGMEVRDVVT 85
L+ + ++ + A++VFD M RD V
Sbjct: 122 AASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVL 181
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV 145
WN+MISG+ N ++++RVF M L +S++ A V +L E Y MG + +
Sbjct: 182 WNTMISGFSRNSYFEDSIRVFVDM-LDVGLSFDSTTLATVLTAVAELQE-YRLGMGIQCL 239
Query: 146 ASW------TIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
AS ++ GL+ + G+ + R LFD++ D+ ++N MI+GY N A
Sbjct: 240 ASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESA 299
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
LF+++ L S ++ VNS + I + +P + I ++ ++ G++
Sbjct: 300 VTLFREL----LASGQR-----VNSSTLVGLIPVY--LPFNHLQLSRLIQNLSLKIGIIL 348
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
+ + T + Y + EV A ++F+ + + WN MI G +N L
Sbjct: 349 QP------------SVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGL 396
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA--QAIKIARNQFTTVS 373
+ + F +M SP+ T TS+L+ C+ L L +G+ +H ++ ++ N + VS
Sbjct: 397 TDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVY--VS 453
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
A++ MYA+CG+I A F + ++++WN++I G HG+ ++AL+LF M +
Sbjct: 454 TALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIP 513
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
P +TF+ +L ACS++GLV +G F M N Y QP S HY C+VD+LGR G + A+
Sbjct: 514 PTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALE 573
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
+ + +E P VWGALLGAC IH N ++ +A +R+ +L+P N G Y++L+ +Y +
Sbjct: 574 FIERM---PLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYST 630
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
A + +K+ + K PGC+ I+I+D +VF SGD SHP+
Sbjct: 631 DRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQ 676
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 215/491 (43%), Gaps = 77/491 (15%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVI 59
R + A+ +FD MP+RDTV WN MI G+ +N + ++++ +F M + D T TV+
Sbjct: 162 TRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVL 221
Query: 60 AGL--------------------MQSD----------------NVQGAKEVFDGMEVRDV 83
+ + SD + +G + +FD ++ D+
Sbjct: 222 TAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKG-RILFDQIDQPDL 280
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLK-DVVSWNLVIGALV------NCQRMDLAESY 136
+++N+MISGY N + A+ +F + V+ + ++G + + Q L ++
Sbjct: 281 ISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNL 340
Query: 137 FKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
++G + T + R + AR+LFD+ P K + +WN MI+GY NG A
Sbjct: 341 SLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRA 400
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
LFQ+M QL N + + +S Q+ W +GL+K
Sbjct: 401 ISLFQEM-------MPQLSP---NPVTVTSILSACAQLGALSIGKW--------VHGLIK 442
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
LE SN+ T ++ Y + G + A ++F+LM ++V WN MI G G +
Sbjct: 443 SER--LE----SNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGH 496
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI-HAQAIKIARNQFTTVSN 374
G+E LK F +M +SG P TF S+L CS + G +I H+ A +
Sbjct: 497 GKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYA 556
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELFERMRLTDFK 433
M+ + R G + +AL +P+ + W +++ H E A RL
Sbjct: 557 CMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMA--NVASKRLFQLD 614
Query: 434 PDDITFVGVLS 444
P+++ + +LS
Sbjct: 615 PENVGYYVLLS 625
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 197/460 (42%), Gaps = 54/460 (11%)
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
D++S T + + G + R+LF+K+ D+ +N++I G+ DNG +F H
Sbjct: 45 DLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGL--PKSSIFLYTH 102
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEK 263
R T+ + ++ AIS ++ + R G++ AHS ++
Sbjct: 103 LRKXTNLRP------DNFTYAFAISAASRLEDE-------------RVGVLLHAHSIVDG 143
Query: 264 YPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
SN+ + ++ YF+ A KVF++M RD +WN MI G N E+ ++ F
Sbjct: 144 VA-SNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
V M + G S D+ T +VLT ++L LG I A K + V +I++Y++C
Sbjct: 203 VDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKC 262
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G + F + D+IS+N++I G ++ E A+ LF + + + + T VG++
Sbjct: 263 GKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322
Query: 444 SACSYAGLVDQGRYYFD-CMKNKYFLQPRS-----------------------------A 473
+ R + +K LQP A
Sbjct: 323 PVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLA 382
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE-IAGER 532
+ ++ + GL D A++L E+ + +P ++L AC + +G+ + G
Sbjct: 383 SWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLI 441
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
E +N V L +MY CG +A+++F M + V
Sbjct: 442 KSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNV 481
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 188/665 (28%), Positives = 319/665 (47%), Gaps = 78/665 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
R + A+ +FD+MP RD V+WN +I GY +G+ + A+ +++++ D FT ++
Sbjct: 153 RMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSS 212
Query: 58 VIAG------LMQSDNVQG-----------------------------AKEVFDGMEVRD 82
V+ + Q + G A+ VFD M+VRD
Sbjct: 213 VLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRD 272
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL--VIGALVNCQRMDLAESYFKEM 140
V++N+MI GY+ +++E++R+F + D +L V L C +
Sbjct: 273 SVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHL---------- 320
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
RD++ + N +++ G ++E+ N++I Y G + A D+F
Sbjct: 321 --RDLSLAKYIYNYMLKAGFVLES------------TVRNILIDVYAKCGDMITARDVFN 366
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKE 256
M +D SW +I+G + S + A+ FK M E+ T+ +ISV R +K
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 257 AHSYLEKYPYSNIA---SWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
S I S +N ++ Y + GEVG ++K+F M T D WN +I
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
GL+ QM++S PD ATF L +C+ L LG++IH ++ +
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQI 546
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
NA+I MY++CG ++++ F + D+++W +I +G EKALE F M +
Sbjct: 547 GNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGI 606
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
PD + F+ ++ ACS++GLVD+G F+ MK Y + P HY CVVDLL R I +A
Sbjct: 607 VPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAE 666
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
I+A I+ ++W ++L ACR +++ E R++EL P++ G ++ + Y
Sbjct: 667 EF---IQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYA 723
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHT 612
+ + + I +K+ + K PG SWI++ HVF SGD S P+ + L +L++
Sbjct: 724 ALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYS 783
Query: 613 EIERE 617
+ +E
Sbjct: 784 LMAKE 788
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 219/494 (44%), Gaps = 73/494 (14%)
Query: 17 PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVI---AGL------- 62
P ++ WN +IR + KNG A+ + ++ E D +T+ +VI AGL
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 63 ----------MQSDNVQG---------------AKEVFDGMEVRDVVTWNSMISGYVCNG 97
+SD G A++VFD M VRD+V+WNS+ISGY +G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 98 LIDEALRVFHGMP----LKDVVSWNLVIGA----LVNCQRMDLAESYFKEMGARDVASWT 149
+EAL ++H + + D + + V+ A LV Q L K V
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+V ++ R +AR++FD+M +D ++N MI GYL V + +F L +
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-------LEN 299
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI 269
Q L+ + A + + + L K ++Y+ K +
Sbjct: 300 LDQFKPDLLTVSSVLRACGHLRDL------------------SLAKYIYNYMLKAGFVLE 341
Query: 270 ASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
++ N+++ Y + G++ +A VF M +D WN +I G ++ E +K F M
Sbjct: 342 STVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
D+ T+ ++++ + L L G+ +H+ IK +VSNA+I MYA+CG +
Sbjct: 402 MEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGD 461
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
+L FSS+ D ++WN++I G L++ +MR ++ PD TF+ L C+
Sbjct: 462 SLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCAS 521
Query: 449 AGLVDQGRYYFDCM 462
G+ C+
Sbjct: 522 LAAKRLGKEIHCCL 535
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 102/184 (55%), Gaps = 1/184 (0%)
Query: 274 NVIVGYFEMGEVGSAIKVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+I Y E S++ VF ++ ++V +WN +I +N L E L+F+ +++ES S
Sbjct: 44 KLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVS 103
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD TF SV+ C+ L ++G ++ Q + + V NA++ MY+R G + A
Sbjct: 104 PDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQV 163
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F +P+ D++SWNS+I G + HGY E+ALE++ ++ + PD T VL A +V
Sbjct: 164 FDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVV 223
Query: 453 DQGR 456
QG+
Sbjct: 224 KQGQ 227
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 146/327 (44%), Gaps = 42/327 (12%)
Query: 212 QLINGLVNSRRIDAAISYFKQM-PETCEKTWNSIISVLIRNGLVKEAHSYL--------- 261
+LI+ + R +++S F+++ P WNSII +NGL EA +
Sbjct: 44 KLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVS 103
Query: 262 -EKYPYSNIASW-----------------------TNVIVG------YFEMGEVGSAIKV 291
+KY + ++ +++ VG Y MG + A +V
Sbjct: 104 PDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQV 163
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F+ M RD+ WN +I G + EE L+ + ++K S PD+ T +SVL +L +
Sbjct: 164 FDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVV 223
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
G+ +H A+K N V+N ++ MY + A F + + D +S+N++ICG
Sbjct: 224 KQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGY 283
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
E+++ +F L FKPD +T VL AC + + +Y ++ M F+
Sbjct: 284 LKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLES 342
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEI 498
+ ++D+ + G + A ++ N +
Sbjct: 343 TVR-NILIDVYAKCGDMITARDVFNSM 368
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 195/638 (30%), Positives = 295/638 (46%), Gaps = 60/638 (9%)
Query: 34 NGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME----VRDVVTWNSM 89
+G L A LF++M RD T+NT+I+G + S ++ A E++ M+ + D T+ S+
Sbjct: 49 SGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSI 108
Query: 90 ISGYVCNGLIDEALRVFHGMPLK-----DVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
+ G C +D +V H + +K V + + ++ C+R+ A FK + R+
Sbjct: 109 LKGVACACRLDVGQQV-HSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRN 167
Query: 145 VASWTIMVNGLVREG---------RIVEAR------------------KLFDKMPAK--- 174
SW ++ G V EG R +E K F K+ +
Sbjct: 168 SVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHC 227
Query: 175 ---------DVQAWNLMIAGYLDNGCVGVAEDLFQ-KMHDRDLTSWKQLINGLVNSRRID 224
D N I Y G + AE +F + RDL +W ++ + R +
Sbjct: 228 KIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKE 287
Query: 225 AAISYFKQMP----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
A F M E T+ +IIS K H + K + N ++ +
Sbjct: 288 TAFKLFLDMQQFGFEPDIYTYTTIISACSHKDNGKSLHGLVIKRGLEQLVPICNAVIAMY 347
Query: 281 EMGEVGS---AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
S A+ VF M ++D WN ++ G + E LK FV M+ + D+
Sbjct: 348 LESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYA 407
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
F++VL CSDL TL LG+QIH +K V++++I MY++CG I+ A F
Sbjct: 408 FSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTA 467
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
I+WNSI+ A HG + AL LF +MR K D ITFV L+ACS+ GLV+QGRY
Sbjct: 468 KDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRY 527
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
M + Y + PR HY C VDL GR G +DEA L+ + D VW LLGAC
Sbjct: 528 LLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDP---DAMVWKTLLGAC 584
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
R +I++ ++ELEP Y+IL+ MY R ++ + M+E VKK PG
Sbjct: 585 RACGDIELAAQVASHLLELEPEEHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKVPG 644
Query: 578 CSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
SWI++ + H F++ D H F + +L L +I+
Sbjct: 645 WSWIEVKNEVHAFIADDRCHSHFEEIYQILEQLMEDIK 682
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 190/469 (40%), Gaps = 63/469 (13%)
Query: 113 DVVSWNLVIGALVNCQR--MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
D+ + N ++ C + A + F EM RD +W M++G V G + A +L+
Sbjct: 33 DIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKS 92
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH--------DRDLTSWKQLINGLVNSRR 222
M + + L D+ Q++H + + + L++ R
Sbjct: 93 MKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCER 152
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNG------------------------------ 252
+ A FK +P +WN++I+ + G
Sbjct: 153 VRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTL 212
Query: 253 --------LVKEAHSYLEKYPYSNIASWTN-VIVGYFEMGEVGSAIKVFE-LMTTRDVTV 302
L + H + K+ + N I Y + G + A +VF+ + +RD+
Sbjct: 213 LDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVT 272
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
WN M+ +D E K F+ M++ G PD T+T++++ CS D G+ +H I
Sbjct: 273 WNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSH---KDNGKSLHGLVI 329
Query: 363 KIARNQFTTVSNAMITMY--ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
K Q + NA+I MY + +++ AL F S+ D +SWNSI+ G + G++E A
Sbjct: 330 KRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENA 389
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L+LF MR D F VL +CS + G+ + K + + ++
Sbjct: 390 LKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQ-QIHVLTVKSGFESNDFVASSLIF 448
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
+ + G+I++A + D S W +++ A H G++A
Sbjct: 449 MYSKCGMIEDARKSFEKTAKD----SSITWNSIMFAYAQHGQ---GDVA 490
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 199/459 (43%), Gaps = 60/459 (13%)
Query: 173 AKDVQAWNLMIAGY--LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
+ D+ A N +++ Y +G + A +LF +M RD +W +I+G VNS + +A +
Sbjct: 31 SADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELY 90
Query: 231 KQ------MPETCEKTWNSI---ISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYF 280
K MP+ T+ SI ++ R + ++ HS + K Y ++ + + ++ Y
Sbjct: 91 KSMKSFGLMPDA--YTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYA 148
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ V A VF+ + R+ WN +I G + M+E G D+ TF+
Sbjct: 149 KCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSP 208
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS-SVPIH 399
+LT+ + L Q+H + IK TV NA IT Y++CG+++ A F +V
Sbjct: 209 LLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSR 268
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA-------GLV 452
D+++WNS++ H E A +LF M+ F+PD T+ ++SACS+ GLV
Sbjct: 269 DLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDNGKSLHGLV 328
Query: 453 ---------------------------DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRF 485
+ F M++K + ++ +
Sbjct: 329 IKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESK-----DRVSWNSILTGFSQT 383
Query: 486 GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVY 544
G + A+ L +R +++ + A+L +C +++G +I V +N V
Sbjct: 384 GHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVA 443
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQI 583
L MY CG EDA++ F + K+ +W I
Sbjct: 444 SSLIFMYSKCGMIEDARKSFEK-----TAKDSSITWNSI 477
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 208/473 (43%), Gaps = 42/473 (8%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIA 60
R+++A +F +P+R++V+WN +I G+ G D A L M E D T++ ++
Sbjct: 152 RVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLT 211
Query: 61 GLMQSDNVQ-----GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG-MPLKDV 114
L + + K + G++ + V N+ I+ Y G +++A RVF G + +D+
Sbjct: 212 LLDEKKFYKLTMQLHCKIIKHGVQFDNTVC-NATITSYSQCGSLEDAERVFDGAVGSRDL 270
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGA----RDVASWTIMV-------NGLVREGRIVE 163
V+WN ++ A + R + A F +M D+ ++T ++ NG G +++
Sbjct: 271 VTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDNGKSLHGLVIK 330
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV--AEDLFQKMHDRDLTSWKQLINGLVNSR 221
R L +P N +IA YL++ + A ++F M +D SW ++ G +
Sbjct: 331 -RGLEQLVP-----ICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTG 384
Query: 222 RIDAAISYFKQMPETCEKTWNSIISVLIRN-------GLVKEAHSYLEKYPY-SNIASWT 273
+ A+ F M + S ++R+ L ++ H K + SN +
Sbjct: 385 HSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVAS 444
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++I Y + G + A K FE WN ++F ++ G+ L F QM++
Sbjct: 445 SLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKM 504
Query: 334 DNATFTSVLTICSDLPTLDLGRQ-IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
D+ TF + LT CS + ++ GR + + A + + ++ R G + A
Sbjct: 505 DHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKAL 564
Query: 393 FSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
S+P D + W +++ G E A ++ L + +P++ +LS
Sbjct: 565 IESMPFDPDAMVWKTLLGACRACGDIELAAQVAS--HLLELEPEEHCTYVILS 615
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 358 HAQAIKIARNQFTTVSNAMITMYARC--GNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
H Q IK+ R+ +N +++ Y RC G + A F + D ++WN++I G G
Sbjct: 22 HCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSG 81
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
A EL++ M+ PD TF +L + A +D G+
Sbjct: 82 SLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQ 122
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 266/500 (53%), Gaps = 44/500 (8%)
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG---------------YLDNGCV-- 192
I + + G + A +LF + D WN MI G ++NGCV
Sbjct: 52 IYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRP 111
Query: 193 ----------------------GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
GV +F+ + + LI N + A + F
Sbjct: 112 DKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALF 171
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+ W+++ + R G + A ++ P ++ SW +I GY + GE+ SA K
Sbjct: 172 DGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARK 231
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+F+ + RDV WN MI G ++ L+ F +M+ G PD T S+L+ C+DL
Sbjct: 232 LFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGD 291
Query: 351 LDLGRQIHAQAIKIA-RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
LD G++IH ++ R+ + NA+I MYA+CG+I AL F + D+ +WNS++
Sbjct: 292 LDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLG 351
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
GLA+HG+AEK++ LF MR +PD+ITFVGVL ACS+AG V++GR YFD M+++Y ++
Sbjct: 352 GLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIE 411
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
P HY C+VDLLGR GL++EA + ++ ++ IE + VW LLGACRIH N+++G A
Sbjct: 412 PNIRHYGCMVDLLGRAGLLNEAFDFIDTMK---IEPNAIVWRTLLGACRIHGNVELGRRA 468
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
+++++ + SG Y++L+ +Y S G + +++ M ++GV+KE GCS I+ ++ +
Sbjct: 469 NMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIEGDNKALM 528
Query: 590 FLSGDSSHPKFHRLRYLLNL 609
DS PK + + L L
Sbjct: 529 HFLFDSK-PKLNSRKPFLEL 547
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 187/410 (45%), Gaps = 31/410 (7%)
Query: 34 NGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME---VR-DVVTWNSM 89
+G + A LF + E D F +NT+I G QS + A ++ ME VR D T+ +
Sbjct: 60 SGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFV 119
Query: 90 ISGYVCNGLIDEAL------RVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
+ C L + RVF + N +I NC + +A + F R
Sbjct: 120 LKA--CTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKR 177
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
DV +W+ + G R G + AR+LFD+MP KD+ +WN+MI GY G + A LF ++
Sbjct: 178 DVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVP 237
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLV---KE 256
RD+ +W +I G V A+ F++M E T S++S G + +
Sbjct: 238 KRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQR 297
Query: 257 AHSYLEKYPYSNIASWTN--VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
H + + + +++ +I Y + G + A++VF+ M +DV+ WN ++ GL +
Sbjct: 298 IHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHG 357
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
E+ + F +M++ PD TF VL CS ++ GRQ + R+++ N
Sbjct: 358 HAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQY----FDLMRDEYNIEPN 413
Query: 375 -----AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAE 418
M+ + R G + A ++ I + I W +++ HG E
Sbjct: 414 IRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVE 463
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 140/274 (51%), Gaps = 22/274 (8%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ LFD +RD V W+ + GY + G L A LF++MP +D+ ++N +I G + +
Sbjct: 167 ARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEM 226
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGAL 124
+ A+++FD + RDVVTWN+MI+GYV G +AL +F M L D V+ ++ A
Sbjct: 227 ESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSAC 286
Query: 125 VNCQRMDLAESY---FKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQ 177
+ +D + EMG RD++ ++ N L+ + G IV A ++F M KDV
Sbjct: 287 TDLGDLDAGQRIHCCISEMGFRDLS--VLLGNALIDMYAKCGSIVRALEVFQGMREKDVS 344
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHD----RDLTSWKQLINGLVNSRRIDAAISYFKQM 233
WN ++ G +G + LF +M D ++ ++ ++ R++ YF M
Sbjct: 345 TWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLM 404
Query: 234 P-----ETCEKTWNSIISVLIRNGLVKEAHSYLE 262
E + + ++ +L R GL+ EA +++
Sbjct: 405 RDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFID 438
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 179/424 (42%), Gaps = 74/424 (17%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-------------------- 48
A LF + + DT WN MIRG ++ NA+ L++QM
Sbjct: 66 AHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTR 125
Query: 49 -------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
E + F NT+I ++ A+ +FDG RDVV W+++
Sbjct: 126 LCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSAL 185
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
+GY G + A ++F MP+KD+VSWN++I M+ A F E+ RDV +W
Sbjct: 186 TAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWN 245
Query: 150 IMVNGLVREGRIVEARKLFDKMPA-----KDVQAWNLMIA----GYLDNG-----CVGVA 195
M+ G V G +A ++F++M + +V +L+ A G LD G C+
Sbjct: 246 AMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCI--- 302
Query: 196 EDLFQKMHDRDLTSW--KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
+M RDL+ LI+ I A+ F+ M E TWNS++ L +G
Sbjct: 303 ----SEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGH 358
Query: 254 V-KEAHSYLEKYPYS---NIASWTNVIVGYFEMGEVGSAIKVFELMTTR-----DVTVWN 304
K H + E + ++ V+V G V + F+LM ++ +
Sbjct: 359 AEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYG 418
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
M+ LG L E F MK P+ + ++L C ++LGR+ + Q +K+
Sbjct: 419 CMVDLLGRAGLLNEAFDFIDTMK---IEPNAIVWRTLLGACRIHGNVELGRRANMQLLKM 475
Query: 365 ARNQ 368
++
Sbjct: 476 RHDE 479
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 161/401 (40%), Gaps = 82/401 (20%)
Query: 239 KTWNSIISVLIRNGLVKEAH-SYLEKYPYSNIASWTNVIVGYFEM--GEVGSAIKVFELM 295
+ W S ++ G +K+ H S + K SN ++ +I G + A ++F +
Sbjct: 18 QLWRSCTTI----GTLKQIHASMIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHI 73
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
T D +WN MI G ++ + + QM+ PD TF VL C+ L + +G
Sbjct: 74 TEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGF 133
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGN--IQSALLE--------------------- 392
+H + ++ T V N +I +A CG+ + AL +
Sbjct: 134 GVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRG 193
Query: 393 --------FSSVPIHDIISWNSIICGLAYHGYAE-------------------------- 418
F +P+ D++SWN +I G A G E
Sbjct: 194 ELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVL 253
Query: 419 -----KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSA 473
+ALE+FE MR PD++T + +LSAC+ G +D G+ C+ F
Sbjct: 254 CGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVL 313
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK--VGEIAGE 531
++D+ + G I A+ + +R E + W ++LG H + + +
Sbjct: 314 LGNALIDMYAKCGSIVRALEVFQGMR----EKDVSTWNSVLGGLAFHGHAEKSIHLFTEM 369
Query: 532 RVMELEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKE 569
R +++ P+ + + ++C GR E+ ++ F M++
Sbjct: 370 RKLKIRPDE----ITFVGVLVACSHAGRVEEGRQYFDLMRD 406
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 103/214 (48%), Gaps = 44/214 (20%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R + A+ LFD+MP +D V+WNVMI GY K G +++A LF+++P+RD+ T+N +IAG
Sbjct: 191 RRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAG 250
Query: 62 LMQSDNVQGAKEVFDGM----EVRDVVTWNSMISG-------------YVC--------- 95
+ + Q A E+F+ M E+ D VT S++S + C
Sbjct: 251 YVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDL 310
Query: 96 -----NGLID---------EALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
N LID AL VF GM KDV +WN V+G L + + F EM
Sbjct: 311 SVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMR 370
Query: 142 ARDVASWTIMVNGLV----REGRIVEARKLFDKM 171
+ I G++ GR+ E R+ FD M
Sbjct: 371 KLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLM 404
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 185/591 (31%), Positives = 304/591 (51%), Gaps = 50/591 (8%)
Query: 51 DMFTYNTVIA--GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
D FT + ++A L +S ++Q A+ VF + T NS+I G L EAL +
Sbjct: 19 DPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQE 78
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
M ++ ++ +L R EG+ +
Sbjct: 79 MMVQGLIPDRYTFPSLFKSCRNS-------------------------SEGKQIHCHS-- 111
Query: 169 DKMP-AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
K+ A D A N ++ Y + GC+ A +F KM D+ + SW +I + + A+
Sbjct: 112 TKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAV 171
Query: 228 SYFKQMPET-----CEKTWNSIISVLIRN---GLVKEAHSYLEKYPYSNIASWTNVIVG- 278
F +M ++ E T ++++ R +VK H Y++++ + V++
Sbjct: 172 RLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDV 231
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G V A +F+ +++ WN+MI G E+ EE L F +M+ G D T
Sbjct: 232 YCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTM 291
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
S+L C+ L L+LG+ +HA K + + A++ MYA+CG+I++A+ F +P
Sbjct: 292 ASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPE 351
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
D+++W ++I GLA G AE AL+ F+ M + KPD ITFVGVL+ACS+AG VD+G +
Sbjct: 352 KDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISH 411
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F+ M + Y +QP HY +VD+LGR G I EA L I++ + V G LLGACR
Sbjct: 412 FNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEEL---IKSMPMAPDQFVLGGLLGACR 468
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
IH N++ E A ++++E++P +SG Y++L+ +Y S + E+AKR M E G++K PGC
Sbjct: 469 IHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGC 528
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI--------EREILFD 621
S I+++ H F+ GDSSH + + +L + +++ + E+LFD
Sbjct: 529 SQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFD 579
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 26/267 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+Q A++LFDK +++ +WN+MI G+ ++ + A+ LF +M + + +A L+ +
Sbjct: 238 VQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLA 297
Query: 66 DNVQGAKEVFDGMEVR--------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
GA E+ + DV +++ Y G I+ A++VFH MP KDV++W
Sbjct: 298 CTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTW 357
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMP- 172
+I L C + + A YF EM + V I G++ G + E F+ M
Sbjct: 358 TALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSD 417
Query: 173 AKDVQAWNLMIAGYLD----NGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI----D 224
+Q G +D G + AE+L + M + + ++ GL+ + RI +
Sbjct: 418 TYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSM---PMAPDQFVLGGLLGACRIHGNLE 474
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRN 251
AA KQ+ E ++S VL+ N
Sbjct: 475 AAERAAKQLLEI--DPYHSGTYVLLSN 499
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 137/314 (43%), Gaps = 57/314 (18%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE------------------- 49
A+ +FDKM + V+W MI + + + A+ LF++M +
Sbjct: 139 ARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACA 198
Query: 50 --RDM------------------FTYNTVIAGL-MQSDNVQGAKEVFDGMEVRDVVTWNS 88
RD+ NTV+ + + VQ A+++FD + +++ +WN
Sbjct: 199 RARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNI 258
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA-LVNCQRMDLAE------SYFKEMG 141
MI+G+V + +EAL +F M K + + + + L+ C + E +Y K+
Sbjct: 259 MINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQR 318
Query: 142 AR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
DVA T +V+ + G I A ++F +MP KDV W +I G G A F
Sbjct: 319 IDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFD 378
Query: 201 KMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPET-----CEKTWNSIISVLIRN 251
+MH + D ++ ++ ++ +D IS+F M +T + + ++ +L R
Sbjct: 379 EMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRA 438
Query: 252 GLVKEAHSYLEKYP 265
G + EA ++ P
Sbjct: 439 GRIAEAEELIKSMP 452
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 252/445 (56%), Gaps = 19/445 (4%)
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCE 238
G L++ +F +M +RD SW LI G +R A+S ++M P+T
Sbjct: 113 GGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTF- 171
Query: 239 KTWNSIISVL-----IRNGLVKEAHSYLEKYPYSN-IASWTNVIVGYFEMGEVGSAIKVF 292
T ++++ + I+ G+V H Y K + N + +++I Y ++ ++KVF
Sbjct: 172 -TLSTVLPIFAECADIKRGMV--VHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVF 228
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ + D +WN M+ G +N EE L F +M ++G P TF+S++ +L L
Sbjct: 229 DSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLR 288
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
LG+Q+HA I+ N +S+++I MY +CGN+ A F+ + DI+SW ++I G A
Sbjct: 289 LGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYA 348
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
HG +A LFERM L + KP+ ITF+ VL+ACS+AGLVD G YF+ M N+Y P
Sbjct: 349 LHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSL 408
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
H + D LGR G +DEA N ++E++ I+ + +VW LL ACR+H N + E ++
Sbjct: 409 EHCAALADTLGRAGDLDEAYNFISEMK---IKPTSSVWSTLLRACRVHKNTVLAEEVAKK 465
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLS 592
+ ELEP + G ++IL+ MY + GR +A ++ M+ G+KKEP CSWI++ + HVF++
Sbjct: 466 IFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIA 525
Query: 593 GDSSHPKFHRLRYLLNLLHTEIERE 617
D SHP + R+ LN+ ++ R+
Sbjct: 526 HDKSHPWYDRIIDALNVYSEQMIRQ 550
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 149/342 (43%), Gaps = 46/342 (13%)
Query: 30 GYFKNGFLDNAMC-LFNQMP--ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
G F + F NA+ L ++P T G ++S + ++VFD M RD V+W
Sbjct: 79 GSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSW 138
Query: 87 NSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNC---QRMDLAESYFKE 139
N++I G + EAL + M + D + + V+ C +R + Y +
Sbjct: 139 NTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIK 198
Query: 140 MG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
G DV + +++ ++ + K+FD D WN M+AGY NG V A +
Sbjct: 199 NGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGI 258
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV-----LIRNGL 253
F++M + A + + +P T++S+I L+R G
Sbjct: 259 FRRM--------------------LQAGV---RPVP----VTFSSLIPAFGNLSLLRLG- 290
Query: 254 VKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
K+ H+YL + ++ NI +++I Y + G V A +VF + + D+ W MI G
Sbjct: 291 -KQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYAL 349
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+ E F +M+ P++ TF +VLT CS +D G
Sbjct: 350 HGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNG 391
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 145/337 (43%), Gaps = 65/337 (19%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNV----------------MIRGYFKNGFLDNAMCLF 44
+ +A + + +FD+M +RD V+WN M+R +++GF+ + L
Sbjct: 115 LESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLS 174
Query: 45 NQMP-----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
+P + D+F +++I + + +VFD
Sbjct: 175 TVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDC 234
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYF 137
D V WNSM++GY NG ++EAL +F M V V+++ +I A N + L +
Sbjct: 235 DAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLH 294
Query: 138 KEM-GAR---DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ AR ++ + +++ + G + AR++F+ + + D+ +W MI GY +G
Sbjct: 295 AYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTT 354
Query: 194 VAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMP---------ETCEKT 240
A LF++M + ++ ++ ++ +D YF M E C
Sbjct: 355 EAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCA-- 412
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIAS-WTNVI 276
++ L R G + EA++++ + +S W+ ++
Sbjct: 413 --ALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLL 447
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 124/316 (39%), Gaps = 58/316 (18%)
Query: 318 EGLKFFVQMKES-GP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
+ F+QM+ S P S A+ + L C+ L L +HA AI+ +NA
Sbjct: 30 HAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANA 89
Query: 376 MITMYARC---------------GNIQSALLE-----FSSVPIHDIISWNSIICGLAYHG 415
++ + + G ++SA E F + D +SWN++I G A H
Sbjct: 90 LLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHK 149
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVL---SACS--YAGLVDQG--------------- 455
++AL + M F PD T VL + C+ G+V G
Sbjct: 150 RHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGS 209
Query: 456 ---RYYFDCMKNKYFLQPRSAHYTCVVDL-------LGRFGLIDEAMNLLNEIRADGIEV 505
Y +C + Y ++ + C L + G ++EA+ + + G+
Sbjct: 210 SLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRP 269
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIF 564
P + +L+ A + +++G+ ++ N N + L +MY CG + A+R+F
Sbjct: 270 VPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVF 329
Query: 565 AQMKENGVKKEPGCSW 580
NG++ SW
Sbjct: 330 -----NGIQSPDIVSW 340
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 182/549 (33%), Positives = 281/549 (51%), Gaps = 49/549 (8%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESYF 137
++V+W+++I G+ NG EAL + M + + V+ A Q ++L +
Sbjct: 10 NLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKEIH 69
Query: 138 KEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ S +VNGLV R + A K+F K+V ++N MI GY +NG V
Sbjct: 70 GYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVE 129
Query: 194 VAEDLFQKMH--DRDLTSWKQLING----LVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
A++LF +M +D SW +I+G L+ + AA F + E TWN +IS
Sbjct: 130 KAKELFDQMELVGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTATWNVLIS- 188
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
Y NI + + G FE +V WN +I
Sbjct: 189 -----------GYACCNQLENIQNLIQKMKG-----------DGFE----PNVYTWNGII 222
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
G EN E L+ F +M+ S PD T +L C+ L T+ G+Q+HA +I+
Sbjct: 223 SGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYE 282
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
+ A++ MYA+CG+I+ A+ ++ + +++S N+++ A HG+ ++ + LF M
Sbjct: 283 LDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNM 342
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
F+PD +TF+ VLS+C +AG V+ G +FD M Y + P HYTC+VDLL R G
Sbjct: 343 LGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLM-TYYNVTPSLKHYTCIVDLLSRAGR 401
Query: 488 IDEAMNLLNEI--RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL 545
+DEA L+ +I + D + +WGALLG C I N+++GEIA E ++ELEPNN+G Y+
Sbjct: 402 LDEAYELVKKIPRKPDSV-----MWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYV 456
Query: 546 ILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRY 605
+L +Y GR D R +K+ G+ K PGCSWI+ + HVFLS D SH K +
Sbjct: 457 LLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYT 516
Query: 606 LLNLLHTEI 614
L+ L+T +
Sbjct: 517 TLDNLNTHM 525
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 120/523 (22%), Positives = 231/523 (44%), Gaps = 84/523 (16%)
Query: 22 VTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
V+W+ +I G+ +NG+ A+ L +M E + T +V+ + N+ K
Sbjct: 12 VSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGK----- 66
Query: 78 MEVRDVVTWNSMISG-YVCNGLID---------EALRVFHGMPLKDVVSWNLVIGALVNC 127
E+ VT + +S +V NGL+D AL++F G +K+VVS+N +I
Sbjct: 67 -EIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCEN 125
Query: 128 QRMDLAESYFKEMG--ARDVASWTIMVNG----LVREGRIVEARKLFDKMPAKDVQAWNL 181
++ A+ F +M +D SW M++G L++ + A+ FD + +D WN+
Sbjct: 126 GNVEKAKELFDQMELVGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTATWNV 185
Query: 182 MIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
+I+GY + ++L QKM + ++ +W +I+G V + + A+ F +M +
Sbjct: 186 LISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSS 245
Query: 238 EKTWNSIISVL---------IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
+ + ++ I G AHS + Y ++ ++ Y + G + A
Sbjct: 246 LRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYEL-DVHIGAALVDMYAKCGSIKHA 304
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
++V+ ++ ++ N M+ + G+EG+ F M +G PD+ TF SVL+ C
Sbjct: 305 MQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSC--- 361
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
+HA A++ F ++T Y N+ +L ++ + D++S
Sbjct: 362 --------VHAGAVETGHEFFD-----LMTYY----NVTPSLKHYTCIV--DLLS----- 397
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
A + E +E ++ KPD + + +L C G V+ G + + L
Sbjct: 398 -------RAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIE---L 447
Query: 469 QP-RSAHYTCVVDLL---GRFGLIDEAMNLLNEIRADGIEVSP 507
+P + +Y + +L GR+ +D + I+ G+ SP
Sbjct: 448 EPNNTGNYVLLANLYAYAGRWHDLDRTRQM---IKDRGMHKSP 487
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 161/358 (44%), Gaps = 34/358 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDMFTYNTVI 59
R A + A +F ++ V++N MI GY +NG ++ A LF+QM +D ++N++I
Sbjct: 93 RCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMI 152
Query: 60 AG----LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP----L 111
+G L++ ++++ A+ FDG+ RD TWN +ISGY C ++ + M
Sbjct: 153 SGYADNLLKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFE 212
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEARKL 167
+V +WN +I V +LA F EM D+ + I++ R I +++
Sbjct: 213 PNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQV 272
Query: 168 FDKMPAK----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
+ DV ++ Y G + A ++ ++ + +L S ++
Sbjct: 273 HAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHG 332
Query: 224 DAAISYFKQM------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS----WT 273
D I+ F+ M P+ T+ S++S + G V+ H + + Y N+ +T
Sbjct: 333 DEGIALFRNMLGNGFRPD--HVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYT 390
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGL---GENDLGEEGLKFFVQMK 327
++ G + A ++ + + + D +W ++ G G +LGE + ++++
Sbjct: 391 CIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELE 448
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 166/503 (33%), Positives = 267/503 (53%), Gaps = 58/503 (11%)
Query: 151 MVNGLVREGRIVEARKLFDKMP--AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
+++ R G I ARK+FD++P + V WN M++GY G A+ LF M +R++
Sbjct: 136 VIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVI 195
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
+W ++ G + ++AA YF MPE +WN+++S +NGL +EA ++ +
Sbjct: 196 TWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAG 255
Query: 269 I----ASWTNVIVG-----------------------------------YFEMGEVGSAI 289
I +W VI Y + G++ SA
Sbjct: 256 IEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSAR 315
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP-SPDNATFTSVLTICSDL 348
K+F M R+V WN MI G +N ++ F +M + +PD T SV++ C L
Sbjct: 316 KLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHL 375
Query: 349 PTLDLG----RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
L+LG R + IK++ + NAMI MY+RCG+++ A F + D++S+
Sbjct: 376 GALELGNWVVRFLTENQIKLS----ISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSY 431
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
N++I G A HG+ +A+ L M+ +PD +TF+GVL+ACS+AGL+++GR F+ +K+
Sbjct: 432 NTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD 491
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
P HY C+VDLLGR G +++A + + +E V+G+LL A RIH ++
Sbjct: 492 -----PAIDHYACMVDLLGRVGELEDAKRTMERM---PMEPHAGVYGSLLNASRIHKQVE 543
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIN 584
+GE+A ++ ELEP+NSG +++L+ +Y S GR +D +RI MK+ GVKK G SW++
Sbjct: 544 LGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYG 603
Query: 585 DGGHVFLSGDSSHPKFHRLRYLL 607
H F+ D SH + + LL
Sbjct: 604 GKLHKFIVADRSHERSDDIYQLL 626
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 195/412 (47%), Gaps = 46/412 (11%)
Query: 2 RNARIQEAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVI 59
R I A+ +FD++P +R WN M+ GY+K A LF+ MPER++ T+ ++
Sbjct: 142 RLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMV 201
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVV 115
G + +++ A+ FD M R VV+WN+M+SGY NGL +EALR+F M D
Sbjct: 202 TGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDET 261
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVEARKLFDKM 171
+W VI A + LA S + + + + T +++ + G + ARKLF+ M
Sbjct: 262 TWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTM 321
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
P ++V WN MIAGY NG +A +LF++M I+ K
Sbjct: 322 PGRNVVTWNSMIAGYAQNGQSAMAIELFKEM------------------------ITAKK 357
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN-----IASWTNVIVGYFEMGEVG 286
P+ E T S+IS G + E +++ ++ N I+ +I Y G +
Sbjct: 358 LTPD--EVTMVSVISACGHLGAL-ELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSME 414
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A +VF+ M TRDV +N +I G + G E + MKE G PD TF VLT CS
Sbjct: 415 DAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACS 474
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
L+ GR++ A + + M+ + R G ++ A +P+
Sbjct: 475 HAGLLEEGRKVFESIKDPAIDHYA----CMVDLLGRVGELEDAKRTMERMPM 522
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 161/476 (33%), Positives = 258/476 (54%), Gaps = 35/476 (7%)
Query: 145 VASWTIMVNGLVR----EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
VA ++ N LV + AR LFD+MP +DV +W ++ GY G A +F
Sbjct: 172 VAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFC 231
Query: 201 KMHDRDLTSWKQLINGL-VNSRRIDAAISYFKQMP-----------------ETCEKTWN 242
+M + GL N + A +S QM N
Sbjct: 232 RM---------VVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLEN 282
Query: 243 SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
++I + + G A + ++ SWT ++ Y + G++ SA ++F+ M R+
Sbjct: 283 ALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVS 342
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
W+ MI + + EE ++ F M E G P NA SVL+ C+ L LDLGR I+ +
Sbjct: 343 WSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYV 402
Query: 363 KIARNQFTT-VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
+ T + NA I +YA+CG+ +A F+ + +++SWNS+I A HG +E+ L
Sbjct: 403 ISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVL 462
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
LFE+++ T PD+ITF+G+LSACS++GLV +GR YF MK Y ++P+S HY C++DL
Sbjct: 463 RLFEQLKGTCIVPDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSEHYACMIDL 522
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LG+ GL++EA + + +E WGALL ACR++ N+++GE A +++++L P +S
Sbjct: 523 LGKIGLLEEAFEV---AKGMPMETDEAGWGALLNACRMYGNVEIGEFAADKLVQLNPLDS 579
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
G+Y++++++Y S + + K + M+E GVKK PGCS I+++ H FL D SH
Sbjct: 580 GIYVLMSQIYASKNKWDQVKILRVLMRERGVKKNPGCSSIEVDGKFHEFLVADVSH 635
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 53/311 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF--------------------N 45
+ A+NLFD+MP RD V+W ++ GY + G D A +F +
Sbjct: 192 LAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRMVVAGGLQPNEVTLVAVVS 251
Query: 46 QMPERDMFTYNTVI------AGLMQSDNVQ--------------GAKEVFDGMEVRDVVT 85
M + + + ++ G+ +S N++ A+EVFD M V+DV +
Sbjct: 252 AMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASAREVFDSMAVKDVYS 311
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV 145
W +M++ Y G ++ A R+F MP ++ VSW+ +I A + + A FK M V
Sbjct: 312 WTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGV 371
Query: 146 ----ASWTIMVNGLVREGRIVEARKLFDK--MPAKDVQAWNL---MIAGYLDNGCVGVAE 196
A +++ + G + R ++D + K V NL I Y G A
Sbjct: 372 EPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAAS 431
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNG 252
LF +M +R++ SW +I + + + F+Q+ TC E T+ ++S +G
Sbjct: 432 KLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACSHSG 491
Query: 253 LVKEAHSYLEK 263
LV E Y ++
Sbjct: 492 LVSEGRRYFKE 502
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 175/434 (40%), Gaps = 57/434 (13%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ Y + L +A LF++MP+RD+ ++ T++ G + A VF M V +
Sbjct: 180 NALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRMVVAGGL 239
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQR--MDL---------A 133
N + V + + L F M + V +G VN + +D+ A
Sbjct: 240 QPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGG--VGRSVNLENALIDMFGKFGCAASA 297
Query: 134 ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
F M +DV SWT MVN + G + A +LFD MP ++ +W+ MIA Y
Sbjct: 298 REVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAY------- 350
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN----SIISVLI 249
+ + + A+ FK M E + N S++S
Sbjct: 351 ------------------------SQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACA 386
Query: 250 RNGLVKEAHSYLEKYPYSNIASWT----NVIVG-YFEMGEVGSAIKVFELMTTRDVTVWN 304
+ G + + Y S A T N + Y + G+ +A K+F M R+V WN
Sbjct: 387 QLGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAERNVVSWN 446
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
MI + EE L+ F Q+K + PD TF +L+ CS + GR+ + I
Sbjct: 447 SMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACSHSGLVSEGRRYFKEMKLI 506
Query: 365 ARNQFTTVSNA-MITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALE 422
+ + A MI + + G ++ A +P+ D W +++ +G E +
Sbjct: 507 YGIEPKSEHYACMIDLLGKIGLLEEAFEVAKGMPMETDEAGWGALLNACRMYGNVE--IG 564
Query: 423 LFERMRLTDFKPDD 436
F +L P D
Sbjct: 565 EFAADKLVQLNPLD 578
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 16/225 (7%)
Query: 354 GRQIHAQAIKIAR-NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
G +H A+K Q V NA++ YA ++ A F +P D++SW +++ G A
Sbjct: 159 GEGVHCVALKWGHVAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYA 218
Query: 413 YHGYAEKALELFERMRLT-DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
G A++A +F RM + +P+++T V V+SA GL+ GR + + + R
Sbjct: 219 RRGLADEAWRVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGV--GR 276
Query: 472 SAHY-TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI-A 529
S + ++D+ G+FG A + + + + W ++ A K G++ +
Sbjct: 277 SVNLENALIDMFGKFGCAASAREVFDSMAVKDV----YSWTTMVNA-----YAKCGDLES 327
Query: 530 GERVMELEPNNSGV-YLILTEMYLSCGRREDAKRIFAQMKENGVK 573
R+ + P + V + + Y + E+A R+F M E GV+
Sbjct: 328 AARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVE 372
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGLMQ 64
A LF +M +R+ V+WN MI + +G + + LF Q+ D T+ +++
Sbjct: 430 ASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACSH 489
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN-------GLIDEALRVFHGMPLK-DVVS 116
S V + F M++ + S Y C GL++EA V GMP++ D
Sbjct: 490 SGLVSEGRRYFKEMKLIYGIEPKS--EHYACMIDLLGKIGLLEEAFEVAKGMPMETDEAG 547
Query: 117 WNLVIGALVNCQRM 130
W GAL+N RM
Sbjct: 548 W----GALLNACRM 557
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 161/462 (34%), Positives = 252/462 (54%), Gaps = 30/462 (6%)
Query: 156 VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
+REG+ + AR + M +V N ++ Y G + + +F + RDL SW LI
Sbjct: 126 IREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQ 185
Query: 216 GLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN-------GLVKEAHSYLEKYPYSN 268
+ A+ F +M + + + V++ L ++ HSY+ Y
Sbjct: 186 AFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHY---- 241
Query: 269 IASWTNVIVG------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
I +V VG Y + ++ SA KVF+ M ++V WN MI GL E L
Sbjct: 242 IDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDT 301
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITM 379
F M++ G PD T VL C++L L++G+ +HA + RN V NA++ M
Sbjct: 302 FRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAY---MRRNHILADKFVGNALLDM 358
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
YA+CG+I A F S+ D+ S+ ++I GLA HG A A ++F M +P+++TF
Sbjct: 359 YAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTF 418
Query: 440 VGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+G+L ACS+ GLV +G+ YF M +KY L+P++ HY C++DLLGR GL+ EA ++++
Sbjct: 419 LGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHK-- 476
Query: 500 ADGIEVSPTVW--GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
+E+ P V+ GALLGACRIH N+ +GE +++ EL+P+ G Y+++T +Y S R
Sbjct: 477 ---MEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRW 533
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
+DA +I MK ++K PGCS I+++ H F GD SHP+
Sbjct: 534 KDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPR 575
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 181/441 (41%), Gaps = 32/441 (7%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGLMQSDNVQ-----GAKEVF 75
N +IR +N + M N+M E D FT V+ L ++ A+ +
Sbjct: 79 NAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARSIK 138
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAES 135
GM +V N+++ Y G I + +VF P +D+VSW +I A A
Sbjct: 139 TGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVE 198
Query: 136 YFKEMG----ARDVASWTIMVNGLVREGRIVEARKL------FDKMPAKDVQAWNLMIAG 185
F EM D + ++++ G + +K+ + M A DV N ++
Sbjct: 199 AFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKA-DVFVGNALLDM 257
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTW 241
YL + A +F +M +++ +W +I+GL R A+ F+ M + E T
Sbjct: 258 YLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTL 317
Query: 242 NSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTT 297
+++ G++ K H+Y+ + N ++ Y + G + A +VFE M
Sbjct: 318 VGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKR 377
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
RDV + MIFGL + + F +M G P+ TF +L CS + G++
Sbjct: 378 RDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKY 437
Query: 358 HAQ-AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHG 415
Q + K MI + R G ++ A + I D+ + +++ HG
Sbjct: 438 FFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHG 497
Query: 416 YAEKALELFERMRLTDFKPDD 436
+ + + +LT+ PD+
Sbjct: 498 NVDIGESVMQ--KLTELDPDE 516
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 134/315 (42%), Gaps = 57/315 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE---------------- 49
I + Q +FD+ P RD V+W +I+ + K G A+ F +M +
Sbjct: 162 IHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSA 221
Query: 50 ------------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVT 85
D+F N ++ ++ D++ A +VFD M V++VVT
Sbjct: 222 CSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVT 281
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFKEMG 141
WN+MISG G EAL F M K D V+ V+ + N +++ + M
Sbjct: 282 WNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMR 341
Query: 142 ARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+ + + N L+ + G I EA ++F+ M +DV ++ MI G +G A
Sbjct: 342 RNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQ 401
Query: 198 LFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE-----KTWNSIISVL 248
+F +M + + ++ L+ + + YF QM + + + + +I +L
Sbjct: 402 VFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLL 461
Query: 249 IRNGLVKEAHSYLEK 263
R GLVKEA + K
Sbjct: 462 GRAGLVKEAEEIIHK 476
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 126/309 (40%), Gaps = 39/309 (12%)
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
+++ N +I + N + ++F +M G PD T VL + + + G+QIHA
Sbjct: 75 LSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHA 134
Query: 360 QAIKIARNQFTT-VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
++IK F VSN ++ +Y+ CG+I F P D++SW ++I G
Sbjct: 135 RSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYS 194
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-------RYYFDCMKNKYFLQPR 471
+A+E F M + D T V VLSACS G ++ G R+Y D + +
Sbjct: 195 RAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNAL 254
Query: 472 SAHYTCVVDLLGRFGLID------------------------EAMNLLNEIRADGIEVSP 507
Y DL + + D EA++ ++ G++
Sbjct: 255 LDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDE 314
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELEPN----NSGVYLILTEMYLSCGRREDAKRI 563
+L +C N+ V EI + N + V L +MY CG ++A R+
Sbjct: 315 VTLVGVLNSC---ANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRV 371
Query: 564 FAQMKENGV 572
F MK V
Sbjct: 372 FESMKRRDV 380
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 102/248 (41%), Gaps = 18/248 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ A +FD+MP ++ VTWN MI G G A+ F M ++ + + G++ S
Sbjct: 264 LNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNS 323
Query: 66 DNVQGAKEVFDGME--------VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
G E+ + + D N+++ Y G IDEA RVF M +DV S+
Sbjct: 324 CANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSY 383
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPA 173
+I L + A F EM + + GL+ G + E +K F +M
Sbjct: 384 TAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSD 443
Query: 174 K-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR-DLTSWKQLINGLVNSRRIDAAI 227
K + + MI G V AE++ KM R D+ + L+ +D
Sbjct: 444 KYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGE 503
Query: 228 SYFKQMPE 235
S +++ E
Sbjct: 504 SVMQKLTE 511
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 162/435 (37%), Positives = 241/435 (55%), Gaps = 41/435 (9%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N ++ Y GC +A+ LF +M RD+ SW LI+G S
Sbjct: 166 NSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFS------------------- 206
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
G+V +A + N+ SW+ +I GY +G + A ++FE M R+
Sbjct: 207 ------------GMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRN 254
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMK-ESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
V WN MI G +N+ + ++ F QM+ E G +P++ T SVL+ C+ L LDLG+ IH
Sbjct: 255 VVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIH 314
Query: 359 AQAIKIARNQFTT---VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
I RN+ + NA+ MYA+CG + A F + D+ISW+ II GLA +G
Sbjct: 315 RF---IRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYG 371
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
YA +A F M +P+DI+F+G+L+AC++AGLVD+G YFD M Y + P+ HY
Sbjct: 372 YANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHY 431
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
CVVDLL R G +D+A +L+N + ++ + VWGALLG CRI+ + + GE R++E
Sbjct: 432 GCVVDLLSRAGRLDQAESLINSM---PMQPNVIVWGALLGGCRIYKDAERGERVVWRILE 488
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
L+ N+SG + L +Y S GR +DA +M++N K PGCSWI+IN+ + F GDS
Sbjct: 489 LDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDS 548
Query: 596 SHPKFHRLRYLLNLL 610
SHP+ R+ ++ L
Sbjct: 549 SHPQSLRIYSMIREL 563
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 151/289 (52%), Gaps = 19/289 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
AQ LFD+M RD V+WN +I GY +G +D A +F+ M E+++ +++T+I+G + N+
Sbjct: 181 AQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNL 240
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-----LVIGA 123
+ A+++F+ M +R+VV+WN+MI+GY N +A+ +F M + ++ N V+ A
Sbjct: 241 EEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSA 300
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGL----VREGRIVEARKLFDKMPAKDVQAW 179
+ +DL + + + + + N L + G ++EA+ +F +M +DV +W
Sbjct: 301 CAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISW 360
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMPE 235
+++I G G A + F +M + L S+ L+ ++ +D + YF MP+
Sbjct: 361 SIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQ 420
Query: 236 TCEKT-----WNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVG 278
T + ++ +L R G + +A S + P N+ W ++ G
Sbjct: 421 VYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGG 469
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 141/354 (39%), Gaps = 82/354 (23%)
Query: 206 DLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVLIRNGLVKEA-- 257
++ ++ L+ ISYF P E T+ S++ V E
Sbjct: 89 NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQK 148
Query: 258 -HSYLEKYP-YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
H ++ KY SN+ +++ YF++G A K+F+ M RDV WN +I G + +
Sbjct: 149 VHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGM 208
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-N 374
++ F M E VS +
Sbjct: 209 VDKARMVFDGMMEKN----------------------------------------LVSWS 228
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT-DFK 433
MI+ YAR GN++ A F ++P+ +++SWN++I G A + A+ELF +M+
Sbjct: 229 TMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLA 288
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF---------LQPRSAHYTCVVDLLGR 484
P+D+T V VLSAC++ G +D G++ ++ L A CV++ G
Sbjct: 289 PNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGV 348
Query: 485 F---------------------GLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
F G +EA N E+ DG+E + + LL AC
Sbjct: 349 FHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTAC 402
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 138/296 (46%), Gaps = 16/296 (5%)
Query: 283 GEVGSAIKVF-ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ--MKESGPSPDNATFT 339
G + ++ +F ++ ++ +N ++ +++ + +F + + P+PD TFT
Sbjct: 72 GNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFT 131
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
SVL C+ L + G+++H K V N+++ +Y + G A F + +
Sbjct: 132 SVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR 191
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
D++SWN++I G + G +KA +F+ M + + +++ ++S + G +++ R F
Sbjct: 192 DVVSWNTLISGYCFSGMVDKARMVFDGM----MEKNLVSWSTMISGYARVGNLEEARQLF 247
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD-GIEVSPTVWGALLGACR 518
+ M + + + ++ + +A+ L +++ + G+ + ++L AC
Sbjct: 248 ENMPMRNVVS-----WNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACA 302
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQMKENGV 572
+ +G+ R + G++L L +MY CG +AK +F +M E V
Sbjct: 303 HLGALDLGKWI-HRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDV 357
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 98/240 (40%), Gaps = 55/240 (22%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------- 48
R ++EA+ LF+ MP R+ V+WN MI GY +N +A+ LF QM
Sbjct: 236 RVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLV 295
Query: 49 ---------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
E +F N + + V AK VF M R
Sbjct: 296 SVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHER 355
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNCQRMDLAES---Y 136
DV++W+ +I G G +EA F M ++D + N + +G L C L + Y
Sbjct: 356 DVISWSIIIMGLAMYGYANEAFNFFAEM-IEDGLEPNDISFMGLLTACTHAGLVDKGLEY 414
Query: 137 FKEMG-----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
F M + + +V+ L R GR+ +A L + MP + N+++ G L GC
Sbjct: 415 FDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQP----NVIVWGALLGGC 470
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 292/566 (51%), Gaps = 52/566 (9%)
Query: 50 RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
D + N ++ + + +F ++ ++ WN+MI G V N D+A+ + M
Sbjct: 44 HDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLM 103
Query: 110 PLKDVVSWNLVIG-ALVNCQRM-DLAESYFKEMGAR------------DVASWTIMVNGL 155
+ + N L C R+ DL ++G + DV T +V
Sbjct: 104 RSEGFLPNNFTFPFVLKACARLLDL------QLGVKIHTLVVKGGFDCDVFVKTSLVCLY 157
Query: 156 VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
+ G + +A K+FD +P K+V +W +I+GY+ G A D+F+++ + +L
Sbjct: 158 AKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAP------ 211
Query: 216 GLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNV 275
+S I +S Q+ + W I ++ G+V+ N+ T++
Sbjct: 212 ---DSFTIVRVLSACTQLGDLNSGEW--IHKCIMEMGMVR------------NVFVGTSL 254
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ Y + G + A VF+ M +D+ W MI G N L +E + F+QM+ PD
Sbjct: 255 VDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDC 314
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF---TTVSNAMITMYARCGNIQSALLE 392
T VL+ C+ L L+LG + + RN+F + A+I +YA+CG++ A
Sbjct: 315 YTVVGVLSACARLGALELGEWVSGL---VDRNEFLYNPVLGTALIDLYAKCGSMSRAWEV 371
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F + D + WN+II GLA +GY + + LF ++ KPD TF+G+L C++AGLV
Sbjct: 372 FKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLV 431
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
D+GR YF+ M + L P HY C+VDLLGR GL+DEA L IR +E + VWGA
Sbjct: 432 DEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQL---IRNMPMEANAIVWGA 488
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LLGACRIH + ++ E+A ++++ELEP NSG Y++L+ +Y + + ++A ++ M E +
Sbjct: 489 LLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRI 548
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHP 598
+K PGCSWI+++ H FL GD HP
Sbjct: 549 QKPPGCSWIEVDGIVHEFLVGDKYHP 574
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 184/452 (40%), Gaps = 72/452 (15%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLMQSDN 67
LF ++ Q + WN MIRG N D+A+ + M FT+ V+ + +
Sbjct: 68 LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127
Query: 68 VQ-GAK---EVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
+Q G K V G DV S++ Y G +++A +VF +P K+VVSW +I
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISG 187
Query: 124 LVNCQR-------------MDLAESYF---------KEMGARDVASW---TIMVNGLVRE 158
+ + M+LA F ++G + W IM G+VR
Sbjct: 188 YIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRN 247
Query: 159 --------------GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD 204
G + +AR +FD MP KD+ +W MI GY NG A DLF +M
Sbjct: 248 VFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQR 307
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
++ + G++++ A+ W S GLV ++
Sbjct: 308 ENVKPDCYTVVGVLSACARLGALEL---------GEWVS--------GLVDR-----NEF 345
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
Y+ + T +I Y + G + A +VF+ M +D VWN +I GL N + F
Sbjct: 346 LYNPVLG-TALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFG 404
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK-IARNQFTTVSNAMITMYARC 383
Q+++ G PD TF +L C+ +D GR+ + + M+ + R
Sbjct: 405 QVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRA 464
Query: 384 GNIQSALLEFSSVPIH-DIISWNSIICGLAYH 414
G + A ++P+ + I W +++ H
Sbjct: 465 GLLDEAHQLIRNMPMEANAIVWGALLGACRIH 496
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 139/334 (41%), Gaps = 77/334 (23%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE---------------- 49
+++A +FD +P ++ V+W +I GY G A+ +F ++ E
Sbjct: 163 LEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSA 222
Query: 50 -----------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
R++F +++ + N++ A+ VFDGM +D+V+W
Sbjct: 223 CTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSW 282
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMDLAESYFKEMGARDV 145
+MI GY NGL EA+ +F M ++V V+G L C R +GA ++
Sbjct: 283 GAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACAR----------LGALEL 332
Query: 146 ASW-----------------TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD 188
W T +++ + G + A ++F M KD WN +I+G
Sbjct: 333 GEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAM 392
Query: 189 NGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT---- 240
NG V ++ LF ++ D ++ L+ G ++ +D YF M T
Sbjct: 393 NGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIE 452
Query: 241 -WNSIISVLIRNGLVKEAHSYLEKYPY-SNIASW 272
+ ++ +L R GL+ EAH + P +N W
Sbjct: 453 HYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVW 486
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 20/268 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ +++A+++FD MP++D V+W MI+GY NG A+ LF QM ++ + G
Sbjct: 260 KCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVG 319
Query: 62 LMQSDNVQGAKEV---FDGMEVRDVVTWN-----SMISGYVCNGLIDEALRVFHGMPLKD 113
++ + GA E+ G+ R+ +N ++I Y G + A VF GM KD
Sbjct: 320 VLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKD 379
Query: 114 VVSWNLVIGALVNCQRMDLAESYF---KEMGAR-DVASWTIMVNGLVREGRIVEARKLFD 169
V WN +I L + ++ F +++G + D ++ ++ G G + E R+ F+
Sbjct: 380 RVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFN 439
Query: 170 KM-----PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH-DRDLTSWKQLINGLVNSRRI 223
M ++ + M+ G + A L + M + + W L+ R
Sbjct: 440 SMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDT 499
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRN 251
A KQ+ E + WNS VL+ N
Sbjct: 500 QLAELALKQLIEL--EPWNSGNYVLLSN 525
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 164/466 (35%), Positives = 260/466 (55%), Gaps = 18/466 (3%)
Query: 156 VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
VREG+ V A + V +I Y C+G A +F +M +R++ SW +I+
Sbjct: 26 VREGQRVHAH-MIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMIS 84
Query: 216 GLVNSRRIDAAISYFKQM----PETCEKTWNSIISVLIRNG---LVKEAHSYLEKYPYSN 268
G A+ F QM E E T+ +++S L ++ HS++ K Y N
Sbjct: 85 GYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYEN 144
Query: 269 -IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
I ++++ Y + G + A VFE + RDV +I G + L EE L+ F +++
Sbjct: 145 HIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQ 204
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
G S + T+ S+LT S L LD G+Q+H+ ++ + + N++I MY++CGN+
Sbjct: 205 REGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLN 264
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD-FKPDDITFVGVLSAC 446
A F+++P+ +ISWN+++ G + HG + ++LF+ MR + KPD +TF+ VLS C
Sbjct: 265 YARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGC 324
Query: 447 SYAGLVDQGRYYFDCMKNKY-FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
S+ GL D+G FD M N ++ HY CV+DLLGR G ++EA L+ ++ E
Sbjct: 325 SHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKM---PFEP 381
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
+ +WG+LLGACR+H+N +GE G R++E+EP N+G Y+IL+ +Y S GR ED + +
Sbjct: 382 TAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRE 441
Query: 566 QMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK----FHRLRYLL 607
M E V KEPG SWI+++ H F + D SHP+ F ++R LL
Sbjct: 442 LMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELL 487
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 136/291 (46%), Gaps = 17/291 (5%)
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEA---HSYLEKYPY-SNIASWTNVIVGYFEMGEVGS 287
Q PE +N +++ + V+E H+++ K Y + T +I+ Y + +G
Sbjct: 4 QGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGC 63
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A VF+ M R+V W MI G + E L FVQM S P+ TF +VL+ C+
Sbjct: 64 ARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTG 123
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
+LGRQIH+ K V ++++ MYA+ G I A F +P D++S +I
Sbjct: 124 FSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAI 183
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR----YYFDCMK 463
I G A G E+ALELF R++ + +T+ +L+A S +D G+ + C
Sbjct: 184 ISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCEL 243
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
Y + S ++D+ + G ++ A + N + + W A+L
Sbjct: 244 PFYVVLQNS-----LIDMYSKCGNLNYARKIFNNMPVRTV----ISWNAML 285
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 148/329 (44%), Gaps = 60/329 (18%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLM- 63
A+++FD+M +R+ V+W MI GY + GF A+ LF QM D FT+ TV++
Sbjct: 64 ARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTG 123
Query: 64 ----------------------------------QSDNVQGAKEVFDGMEVRDVVTWNSM 89
++ + A+ VF+ + RDVV+ ++
Sbjct: 124 FSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAI 183
Query: 90 ISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD 144
ISGY GL +EAL +F GM + V++ ++ AL +D + + +
Sbjct: 184 ISGYAQLGLDEEALELFCRLQREGMS-SNYVTYASLLTALSGLAALDHGKQVHSHVLRCE 242
Query: 145 VASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
+ + ++ N L+ + G + ARK+F+ MP + V +WN M+ GY +G LF+
Sbjct: 243 LPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFK 302
Query: 201 KMHDR-----DLTSWKQLINGLVNSRRIDAAISYFKQMP------ETCEKTWNSIISVLI 249
M + D ++ +++G + D + F +M E + + +I +L
Sbjct: 303 LMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLG 362
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
R G V+EA ++K P+ A+ ++G
Sbjct: 363 RAGRVEEAFELIKKMPFEPTAAIWGSLLG 391
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 130/324 (40%), Gaps = 53/324 (16%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M GP + +L C + + G+++HA IK +S +I +Y +C
Sbjct: 1 MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+ A F + +++SW ++I G + G+A +AL LF +M +D +P++ TF VLS+
Sbjct: 61 LGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSS 120
Query: 446 CS-----------------------------------YAGLVDQGRYYFDCMKNKYFLQP 470
C+ AG + + R F+C+ + +
Sbjct: 121 CTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSC 180
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
T ++ + GL +EA+ L ++ +G+ + + +LL A + G+
Sbjct: 181 -----TAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVH 235
Query: 531 ERVMELE-PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
V+ E P + L +MY CG A++IF M V SW +
Sbjct: 236 SHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTV-----ISW-------NA 283
Query: 590 FLSGDSSHPKFHRLRYLLNLLHTE 613
L G S H K + L L+ E
Sbjct: 284 MLVGYSKHGKGIEVVKLFKLMREE 307
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 168/433 (38%), Gaps = 82/433 (18%)
Query: 31 YFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMI 90
Y K L A +F++M ER +VV+W +MI
Sbjct: 55 YTKCECLGCARHVFDEMRER-------------------------------NVVSWTAMI 83
Query: 91 SGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEMGARDVA 146
SGY G EAL +F M D ++ V+ + +L + R+
Sbjct: 84 SGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYE 143
Query: 147 SWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
+ + + L+ + GRI EAR +F+ +P +DV + +I+GY G A +LF ++
Sbjct: 144 NHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRL 203
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE---TCEKTW-----NSIISVLIRNGLV 254
++S L+ + AA+ + KQ+ CE + NS+I + + G +
Sbjct: 204 QREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNL 263
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
A P + SW ++VGY + G+ +K+F+LM
Sbjct: 264 NYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMR------------------ 305
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
+E+ PD+ TF +VL+ CS D G ++ + + + +
Sbjct: 306 ------------EENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEH 353
Query: 375 --AMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELFERMRLTD 431
+I + R G ++ A +P + W S++ H + + F RL +
Sbjct: 354 YGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVH--SNTNIGEFVGCRLLE 411
Query: 432 FKPDDITFVGVLS 444
+P++ +LS
Sbjct: 412 IEPENAGNYVILS 424
>gi|147798551|emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
Length = 690
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 180/532 (33%), Positives = 277/532 (52%), Gaps = 37/532 (6%)
Query: 86 WNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAESYFK--- 138
WN++I + EA +F+ M D S++LV+ A C R+ L + +
Sbjct: 146 WNAIIKSFSHGEDPXEAFXIFNLMLENGVCVDKFSFSLVLKA---CSRLGLIKEGMQIHG 202
Query: 139 EMGARDVASWTIMVNGL----VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+G ++ S + N L +R G + AR+LFD+M +D ++N MI GY+ +G V
Sbjct: 203 LLGXMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGYVKHGMVKS 262
Query: 195 AEDLFQ--KMHDRDLTSWKQLINGLVNSRR-IDAAISYFKQMPETCEKTWNSIISVLIRN 251
A +LF M ++L SW +I+G S + A F++MP+ +WNS+I ++
Sbjct: 263 ARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKC 322
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
G ++ AH P ++ SW N++ GY ++GE+ A +F+ M RDV N M+ G
Sbjct: 323 GKMENAHHLFNXMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYV 382
Query: 312 ENDLGEEGLKFFVQMKESGPS-PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+N E L FF M P NAT L+ + L D G +H I N F+
Sbjct: 383 QNGXLMEALXFFHDMLSXKELFPXNATLLITLSAIAQLGHFDEGVALHCY---IEDNGFS 439
Query: 371 ---TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
+ A+I MYA+CG+I +AL++ WN+IJ GLA HG E A ELF M
Sbjct: 440 LSEKLGXALIDMYAKCGSIDNALID----------HWNAIJXGLAIHGLGEVAFELFMEM 489
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
KPBDITF+GVL+AC++AGLV +G F M+ + ++P+ HY C+VD+LGR G
Sbjct: 490 EKLFVKPBDITFIGVLNACNHAGLVKEGLMXFXLMRXVHKVEPKLQHYGCMVDILGRAGH 549
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLIL 547
++E + ++ IE + VW LL ACR H N +GE + ++ ++ N Y++L
Sbjct: 550 VEEXKKFVEKM---PIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLL 606
Query: 548 TEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
+ +Y G D RI MK+ +KK PGCS I++ H F D SHP+
Sbjct: 607 SNIYAXFGMWNDVYRIRMMMKQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQ 658
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 190/411 (46%), Gaps = 59/411 (14%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFD--G 77
D N ++ Y + G L A LF++M RD ++N++I G ++ V+ A+E+FD
Sbjct: 212 DVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGYVKHGMVKSARELFDVMP 271
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRV----FHGMPLKDVVSWNLVIGALVNCQRMDLA 133
ME +++++WNSMISGY + +E LRV F MP +D++SWN +I V C +M+ A
Sbjct: 272 MEQKNLISWNSMISGYARS---EEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENA 328
Query: 134 ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
F M RDV SW MV+G + G I AR LFD+MP +DV + N M+AGY+ NG +
Sbjct: 329 HHLFNXMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGXLM 388
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A F D+ S K+L +AI+ E
Sbjct: 389 EALXFFH-----DMLSXKELFPXNATLLITLSAIAQLGHFDEGV---------------- 427
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
H Y+E +S ++ Y + G + +A+ + WN +J GL
Sbjct: 428 --ALHCYIEDNGFSLSEKLGXALIDMYAKCGSIDNAL----------IDHWNAIJXGLAI 475
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLGRQIHAQAIKIA 365
+ LGE + F++M++ PB+ TF VL C+ L L R +H K+
Sbjct: 476 HGLGEVAFELFMEMEKLFVKPBDITFIGVLNACNHAGLVKEGLMXFXLMRXVHKVEPKLQ 535
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYH 414
M+ + R G+++ +PI +D++ W +++ H
Sbjct: 536 H------YGCMVDILGRAGHVEEXKKFVEKMPIEPNDVV-WRTLLSACRNH 579
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 181/378 (47%), Gaps = 36/378 (9%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP--ERDMFTYNTVIAGLMQSD 66
A+ LFD+M RD+V++N MI GY K+G + +A LF+ MP ++++ ++N++I+G +S+
Sbjct: 232 ARQLFDRMMXRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSE 291
Query: 67 N-VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
++ A E+F+ M RD+++WNSMI G V G ++ A +F+ MP +DVVSW ++
Sbjct: 292 EGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNXMPKRDVVSWANMVDGYA 351
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF-DKMPAKDVQAWN--LM 182
+D+A F EM RDV S M+ G V+ G ++EA F D + K++ N L+
Sbjct: 352 KLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGXLMEALXFFHDMLSXKELFPXNATLL 411
Query: 183 IA-------GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
I G+ D G L + D + ++L L++ +I
Sbjct: 412 ITLSAIAQLGHFDEGVA-----LHCYIEDNGFSLSEKLGXALIDMYAKCGSID------N 460
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSY---LEK-YPYSNIASWTNVIVGYFEMGEVGSAIKV 291
WN+IJ L +GL + A +EK + B ++ V+ G V +
Sbjct: 461 ALIDHWNAIJXGLAIHGLGEVAFELFMEMEKLFVKPBDITFIGVLNACNHAGLVKEGLMX 520
Query: 292 FELM-----TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
F LM + + M+ LG EE KF +M P++ + ++L+ C
Sbjct: 521 FXLMRXVHKVEPKLQHYGCMVDILGRAGHVEEXKKFVEKMP---IEPNDVVWRTLLSACR 577
Query: 347 DLPTLDLGRQIHAQAIKI 364
+ +G + I +
Sbjct: 578 NHENFTIGEPVAKHLISV 595
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 42/285 (14%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ A LF++MP+RD ++WN MI G K G ++NA LFN MP+RD+ ++ ++ G +
Sbjct: 294 LRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNXMPKRDVVSWANMVDGYAKL 353
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-PLKDVVSWNLVI--- 121
+ A+ +FD M RDV++ N+M++GYV NG + EAL FH M K++ N +
Sbjct: 354 GEIDIARGLFDEMPERDVISCNAMMAGYVQNGXLMEALXFFHDMLSXKELFPXNATLLIT 413
Query: 122 ------------GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
G ++C D S +++G +++ + G I A
Sbjct: 414 LSAIAQLGHFDEGVALHCYIEDNGFSLSEKLG-------XALIDMYAKCGSIDNAL---- 462
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDA 225
+ WN +J G +G VA +LF +M B ++ ++N ++ +
Sbjct: 463 ------IDHWNAIJXGLAIHGLGEVAFELFMEMEKLFVKPBDITFIGVLNACNHAGLVKE 516
Query: 226 AISYFKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
+ F M E + + ++ +L R G V+E ++EK P
Sbjct: 517 GLMXFXLMRXVHKVEPKLQHYGCMVDILGRAGHVEEXKKFVEKMP 561
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 115/310 (37%), Gaps = 52/310 (16%)
Query: 236 TCEKTWNSIISVLI----RNGL--VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
T K WNS LI L V + HS L + N S T I+ F +
Sbjct: 62 TXHKPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLV 121
Query: 290 KVFE-LMTTR----------DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
+ L +R + +WN +I + E F M E+G D +F
Sbjct: 122 EFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPXEAFXIFNLMLENGVCVDKFSF 181
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+ VL CS L + G QIH + + N ++ +Y RCG + A F +
Sbjct: 182 SLVLKACSRLGLIKEGMQIHGLLGXMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMX 241
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDF-------------------------- 432
D +S+NS+I G HG + A ELF+ M +
Sbjct: 242 RDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELF 301
Query: 433 ----KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
K D I++ ++ C G ++ + F+ M + + + +VD + G I
Sbjct: 302 EEMPKRDLISWNSMIDGCVKCGKMENAHHLFNXMPKRDVVS-----WANMVDGYAKLGEI 356
Query: 489 DEAMNLLNEI 498
D A L +E+
Sbjct: 357 DIARGLFDEM 366
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 184/605 (30%), Positives = 312/605 (51%), Gaps = 36/605 (5%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYN-TVIAGLMQSDN 67
A+ +FD M Q + WN MIRGY +A+ +F +M R + N T+ A + S
Sbjct: 71 ARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAA 130
Query: 68 VQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
G K +G + DV + +++ Y + EA +VF M +DVVSW
Sbjct: 131 FAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSW 190
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPA 173
+I A C D EM A + + + L+ + + E R +++++
Sbjct: 191 TSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGK 250
Query: 174 ----KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
DV N +I+ Y GC+ A + FQ M R SW LI+G V + A+
Sbjct: 251 FGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRI 310
Query: 230 FKQM------PETCEKTWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-Y 279
F++M P+ T S++S + G +++ HSY++ TN ++ Y
Sbjct: 311 FEEMLLHGVTPDGI--TLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMY 368
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G++ +A +VF+ MT +DV W VM+ G + F +MK +
Sbjct: 369 AKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALV 428
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
S+L+ CS L LD GR+IH+ ++ + + +A++ MYA+CG I +A F +
Sbjct: 429 SLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHK 488
Query: 400 DIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
+SWN++I GLA +GY ++A+ELF++M L D KPD IT VL AC++ G+VD+G Y
Sbjct: 489 QTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRY 548
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F M + + P + HY C+VDLLGR G++DEA + + ++ IE +P +WG+LL ACR
Sbjct: 549 FYLMSSLGVV-PDTEHYGCIVDLLGRAGMLDEAFHFIKKMP---IEPNPVIWGSLLAACR 604
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
+H+ + +G++ G+ ++ + PN+ GV+++++ ++ + +D + + M G++K PG
Sbjct: 605 VHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGH 664
Query: 579 SWIQI 583
S +Q+
Sbjct: 665 SSVQV 669
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 189/436 (43%), Gaps = 28/436 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM-- 63
++EA +F++M +RD V+W MI + G D + + ++M + I L+
Sbjct: 172 VKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSA 231
Query: 64 --QSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
Q+ V + V++ G+E DV N++IS Y G + +AL F MP + S
Sbjct: 232 CGQTQAVDEGRWVYNQVGKFGIEA-DVDIRNALISMYTKCGCLSDALEAFQAMPARYTKS 290
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTI-MVNGLVREGRIVEARK-------LF 168
WN +I V A F+EM V I +V+ L ++ E RK +
Sbjct: 291 WNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIK 350
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
D D N +I Y G + AE +FQ M +D+ SW ++ G V + A +
Sbjct: 351 DNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFN 410
Query: 229 YFKQMP----ETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YF 280
F++M E S++S + G + +E HSY+E+ + + +V Y
Sbjct: 411 LFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYA 470
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE-SGPSPDNATFT 339
+ G + +A ++F M + WN MI GL N G+E ++ F QM E P PD T
Sbjct: 471 KCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLK 530
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
+VL C+ + +D G + + T ++ + R G + A +PI
Sbjct: 531 AVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIE 590
Query: 400 -DIISWNSIICGLAYH 414
+ + W S++ H
Sbjct: 591 PNPVIWGSLLAACRVH 606
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYNTVIA 60
I A +F KM + T++WN MI G NG+ A+ LF+QM P+ D T V+
Sbjct: 475 IDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLG 534
Query: 61 GLMQSDNVQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-DVV 115
V F M V D + ++ G++DEA MP++ + V
Sbjct: 535 ACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPV 594
Query: 116 SWNLVIGALVNCQRMDLAE 134
W ++ A RMDL +
Sbjct: 595 IWGSLLAACRVHHRMDLGK 613
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 198/652 (30%), Positives = 309/652 (47%), Gaps = 61/652 (9%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYN 56
+R + EA + + + + ++ + G L A L M DMF
Sbjct: 58 LRPLDVGEAMAMLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVAT 117
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+++ M+ Q A+ +FD M ++VVTW ++I+GY N + EAL VF M
Sbjct: 118 SLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYP 177
Query: 117 WNLVIGALVNC----QRMDLAESYFKEMGARDVASWTIMVNGLVR----EGRIVEARKLF 168
+ +GA++N DL S T + N L R G + A + F
Sbjct: 178 SHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAF 237
Query: 169 DKMPAKDVQAWNLMIAGYL-DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
+P K+V W MI+ D + LF M L++G++ +
Sbjct: 238 RMVPDKNVITWTTMISACAEDENYTELGLTLFLDM----------LMDGVLPN------- 280
Query: 228 SYFKQMPETCEKTWNSIISVL---IRNGLVKEAHSYLEKYP-YSNIASWTNVIVGYFEMG 283
E T S++S+ + L K+ ++ K +NI + + Y G
Sbjct: 281 ----------EFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKG 330
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGE------NDL-----GEEGLKFFVQMKESGPS 332
E A++ FE M + WN MI G + +DL G + LK F +K S
Sbjct: 331 ETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMK 390
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
PD TF+S+L++CS + L+ G QIHAQ IK V++A++ MY +CG I+ A
Sbjct: 391 PDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKA 450
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F + I +++W S+I G + HG ++A++LFE MR +P++ITFV VLSACSYAGL
Sbjct: 451 FVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLA 510
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
++ +YFD MK +Y ++P HY C+VD+ R G +D+A IR G E + +W +
Sbjct: 511 EKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAF---IRRTGFEPNEAIWSS 567
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
L+ CR H N+++ A +R++EL P Y++L MY+S R D R+ MK+ G+
Sbjct: 568 LVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRKLMKQEGL 627
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL-NLLHTEIEREILFDAY 623
SWI I D + F + D +H L LL NLL E + I ++ Y
Sbjct: 628 GVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLENLL--EKAKTIGYEPY 677
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 184/660 (27%), Positives = 315/660 (47%), Gaps = 84/660 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS--- 65
A+ +FD++PQ+ +W V++ G +NGF + + F ++ D+ ++ +Q+
Sbjct: 117 ARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIG 176
Query: 66 ------------------------------------DNVQGAKEVFDGMEVRDVVTWNSM 89
+ + +VF+ +E R+ V+WN+M
Sbjct: 177 VDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAM 236
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDV-------VSWNLVIGALVNCQRMDLAESYFKEMGA 142
ISG+V NGL EA F M +++ +S + IG L + ++ E+G
Sbjct: 237 ISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGM 296
Query: 143 R-DVASWTIMVNGLVREGRIVEARKLF-DKMPAKDVQ-AWNLMIAGYLDNGCVGVAEDLF 199
+ ++ T +++ + G + E+ +F V WN MI+G+ +G A LF
Sbjct: 297 QSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLF 356
Query: 200 QKMHD----RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
+M RD+ ++ +N + + R ++ VK
Sbjct: 357 LRMCQNNIKRDVYTYCSTLNSIADMRSLE----------------------------YVK 388
Query: 256 EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
+ H + K ++ ++ Y + GE+ + K+F+ + W ++ ++
Sbjct: 389 QLHGMIWKSGSIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSE 448
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
E+ L F QM+E G P+ TF+ VL C+ L +L+ G+Q+H+ K + V +
Sbjct: 449 WEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESV 508
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
+I MYA+CG+++ A+ F S+ D+ISW ++I G A HG A+ ALELF +M L P+
Sbjct: 509 LIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPN 568
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
TF+ +L ACS+ GLVD+G YF M+ +Y L P HY CVVD+LGR G + EA +
Sbjct: 569 SATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFI 628
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
++ IE VW LLGACR+H NI++ +IA ++V+ P++ ++L+ Y G
Sbjct: 629 MKMP---IEPDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAG 685
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
E + MK ++KE G SWI I H F SGD HP+ + LN+L +++
Sbjct: 686 NIEGGLNVRNMMKSQAMRKETGMSWICIGGKIHKFCSGDQYHPQKDDIYKTLNVLMEKVQ 745
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/542 (21%), Positives = 236/542 (43%), Gaps = 53/542 (9%)
Query: 46 QMPERDM-FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALR 104
Q+ E+ + N ++ + + A++VFD + + V +W ++ G NG + +
Sbjct: 91 QLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGID 150
Query: 105 VFHGMPLKDVV----SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV---- 156
F + D+V + + I A + + + E ++ R +S T + L+
Sbjct: 151 YFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYA 210
Query: 157 REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
+ GRI ++ K+F+ + ++ +WN MI+G++ NG A + F +M ++
Sbjct: 211 KLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRP------- 263
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-----SNIAS 271
+ IS K + + + E Y+ + + SNI
Sbjct: 264 -----NVACFISVSKAIGQLGD----------------VEKGRYINRIAFEIGMQSNIHV 302
Query: 272 WTNVIVGYFEMGEVGSAIKVF-ELMTTRDVTV-WNVMIFGLGENDLGEEGLKFFVQMKES 329
T +I + + G V + VF + V + WN MI G + GEE + F++M ++
Sbjct: 303 GTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQN 362
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
D T+ S L +D+ +L+ +Q+H K + + ++ NA++ YA+CG + +
Sbjct: 363 NIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWK-SGSIGVSLCNALMDAYAKCGELDAM 421
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F + + ISW +++ + E AL +F +MR F+P+ +TF GVL++C+
Sbjct: 422 RKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASL 481
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
++ G+ F + + + ++D+ + G + +A+ + ++ +
Sbjct: 482 CSLEYGQQVHSLTCKTGFARDKCVE-SVLIDMYAKCGSVRDAIKVFESLKDPDV----IS 536
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELE-PN-NSGVYLILTEMYLSCGRREDAKRIFAQM 567
W A++ H K + R MEL PN NS +L L G ++ R F M
Sbjct: 537 WTAMISGYAQHGMAK-DALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLM 595
Query: 568 KE 569
+E
Sbjct: 596 EE 597
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 165/369 (44%), Gaps = 44/369 (11%)
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFEL 294
E C K SI +I+ L++++ + + +++ Y + + GSA +VF+
Sbjct: 74 ERCLKKAKSIHGFVIKFQLIEKSLTVM----------LNQLVIAYSKCSDFGSARQVFDE 123
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+ + V W V++ G EN +G+ +FV++ PD ++ + C + ++ +G
Sbjct: 124 IPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVG 183
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
+HAQ I + T V+ +++ MYA+ G I + F+S+ + +SWN++I G +
Sbjct: 184 EMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSN 243
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
G +A F RM + +P+ F+ V A G V++GR Y + + + +Q
Sbjct: 244 GLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGR-YINRIAFEIGMQSNIHV 302
Query: 475 YTCVVDLLGRFGLIDEA------------MNLLNEIRADGIEVSPTVWGALLGACRI-HN 521
T ++D+ + G + E+ +NL G +S A+L R+ N
Sbjct: 303 GTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQN 362
Query: 522 NIK---------VGEIAGERVMEL---------EPNNSGVYLI--LTEMYLSCGRREDAK 561
NIK + IA R +E + + GV L L + Y CG + +
Sbjct: 363 NIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSIGVSLCNALMDAYAKCGELDAMR 422
Query: 562 RIFAQMKEN 570
++F +E+
Sbjct: 423 KLFDTWEES 431
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 117/515 (22%), Positives = 217/515 (42%), Gaps = 40/515 (7%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVI 59
RI ++ +F+ + R+ V+WN MI G+ NG A F +M ++ + +V
Sbjct: 213 GRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVS 272
Query: 60 AGLMQSDNVQGAKEV----FD-GMEVRDVVTWNSMISGYVCNGLIDEALRV----FHGMP 110
+ Q +V+ + + F+ GM+ ++ ++I + G + E+ V F G
Sbjct: 273 KAIGQLGDVEKGRYINRIAFEIGMQ-SNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCG 331
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMG----ARDVASWTIMVNGLVREGRIVEARK 166
+ + WN +I + A F M RDV ++ +N + + R +E K
Sbjct: 332 VN--LPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIA-DMRSLEYVK 388
Query: 167 LFDKMPAKD----VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
M K V N ++ Y G + LF + + SW L+ S
Sbjct: 389 QLHGMIWKSGSIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSE 448
Query: 223 IDAAISYFKQMPETC----EKTWNSII---SVLIRNGLVKEAHSYLEKYPYSNIASWTNV 275
+ A+S F QM E + T++ ++ + L ++ HS K ++ +V
Sbjct: 449 WEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESV 508
Query: 276 IVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ Y + G V AIKVFE + DV W MI G ++ + ++ L+ F +M+ P+P+
Sbjct: 509 LIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPN 568
Query: 335 NATFTSVLTICSDLPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+ATF +L CS +D G R H + ++ + R G + A
Sbjct: 569 SATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFI 628
Query: 394 SSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY--AG 450
+PI D W++++ HG + L ++ + PDD + +LS +Y AG
Sbjct: 629 MKMPIEPDEKVWSTLLGACRVHGNIQ--LAKIAAQKVLSYNPDDFAALVLLSN-TYREAG 685
Query: 451 LVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRF 485
++ G + MK++ + + C+ + +F
Sbjct: 686 NIEGGLNVRNMMKSQAMRKETGMSWICIGGKIHKF 720
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 66/208 (31%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
+ +++A +F+ + D ++W MI GY ++G +A+ LF +M P + T+
Sbjct: 515 KCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLC 574
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN--GLIDEALRVFHGMPLKDVV 115
++ + C+ GL+DE LR FH M
Sbjct: 575 LL---------------------------------FACSHGGLVDEGLRYFHLME----- 596
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK- 174
+R L ++ + +V+ L R GR+ EA K KMP +
Sbjct: 597 ------------ERYGLVP---------EIEHYACVVDILGRVGRLTEAWKFIMKMPIEP 635
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
D + W+ ++ +G + +A+ QK+
Sbjct: 636 DEKVWSTLLGACRVHGNIQLAKIAAQKV 663
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 188/641 (29%), Positives = 317/641 (49%), Gaps = 41/641 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM------FTYNTVI 59
I EA +F+ + + ++ M++GY KN L+ A+ +M D+ FTY +
Sbjct: 97 INEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKV 156
Query: 60 AG----LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
G L + + G ++ +V +++ Y ID+A ++F MP +D+V
Sbjct: 157 CGDNADLKRGKEIHG--QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLV 214
Query: 116 SWNLVIGALVNC----QRMDLAESYFKEMGARDVASWTIMVN-----GLVREGRIVEARK 166
SWN +I + ++L E D + ++ GL+ G+ +
Sbjct: 215 SWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYA 274
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+ AK V + Y G V A +F M + + SW +++G V + + A
Sbjct: 275 IRAGF-AKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKA 333
Query: 227 ISYFKQM-PETCEKTWNSIISVL--------IRNGLVKEAHSYLEKYPY-SNIASWTNVI 276
I+ F++M E + T +I+ L + G K H ++++ S+I+ ++I
Sbjct: 334 IAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG--KFVHKFVDQLNLGSDISVMNSLI 391
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + V A +F + R WN MI G +N E L F +MK G PD+
Sbjct: 392 SMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSF 451
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T SV+ ++L + IH I+ ++ V+ A++ MY++CG I A F +
Sbjct: 452 TMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMI 511
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+I+WN++I G HG AL+LF++M+ +P+DIT++ V+SACS++GLVD+G
Sbjct: 512 SDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGL 571
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP--TVWGALL 514
+F MK Y L+P HY +VDLLGR G I EA + + + + +SP TV+GA
Sbjct: 572 RHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFI-----ENMPISPGITVYGAXX 626
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
GAC+IH NI+VGE A +++ EL P+ G +++L +Y S + + M++ G+KK
Sbjct: 627 GACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKK 686
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
PGCS +++ + H F SG ++HP+ R+ L L EI+
Sbjct: 687 TPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIK 727
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 215/483 (44%), Gaps = 78/483 (16%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIA 60
+I +A +FD+MP+RD V+WN +I G+ +NGF A+ L +M + D T TV+
Sbjct: 197 QIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLP 256
Query: 61 G------LMQSDNVQG-----------------------------AKEVFDGMEVRDVVT 85
LM ++ G A+ +FDGM+ + VV+
Sbjct: 257 AAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVS 316
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI-GALVNC------QRMDLAESYFK 138
WNSM+ GYV NG ++A+ VF M + + + I AL C +R +
Sbjct: 317 WNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVD 376
Query: 139 EMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
++ D++ +++ + R+ A +F+ + + +WN MI GY NG V A +
Sbjct: 377 QLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALN 436
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
F +M + +S + + I ++ T W I ++IR+ L K
Sbjct: 437 CFSEMKSLGMKP---------DSFTMVSVIPALAELSVTRHAKW--IHGLIIRSCLDK-- 483
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
NI T ++ Y + G + A K+F++++ R V WN MI G G + LG
Sbjct: 484 ----------NIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGR 533
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--A 375
L F +MK+ P++ T+ SV++ CS +D G + H +++K ++ + A
Sbjct: 534 AALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-HFKSMKQDYGLEPSMDHYGA 592
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM--RLTDFK 433
M+ + R G I+ A ++PI I+ G K +E+ E+ +L +
Sbjct: 593 MVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGAC---KIHKNIEVGEKAAKKLFELN 649
Query: 434 PDD 436
PD+
Sbjct: 650 PDE 652
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 160/367 (43%), Gaps = 57/367 (15%)
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
T K + II ++I+NGL E H + T ++ + + G + A +VFE +
Sbjct: 60 TSMKELHQIIPLVIKNGLYNE-HLF-----------QTKLVSLFSKYGSINEAARVFEPI 107
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+ +++ M+ G +N E L F +M+ P FT +L +C D L G+
Sbjct: 108 DDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGK 167
Query: 356 QIHAQAI--KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
+IH Q I A N F ++ MYA+C I A F +P D++SWN+II G +
Sbjct: 168 EIHGQLITNSFAANVFAMT--GVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQ 225
Query: 414 HGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL---------------------- 451
+G+A+KALEL RM+ +PD IT V VL A + GL
Sbjct: 226 NGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNI 285
Query: 452 -------------VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
V+ R FD M K + + ++D + G ++A+ + ++
Sbjct: 286 STALADMYSKCGSVETARLIFDGMDQKTVVS-----WNSMMDGYVQNGEPEKAIAVFEKM 340
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGRR 557
+GI+ + L AC +++ G+ + V +L ++ V L MY C R
Sbjct: 341 LEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRV 400
Query: 558 EDAKRIF 564
+ A IF
Sbjct: 401 DIASDIF 407
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 190/632 (30%), Positives = 317/632 (50%), Gaps = 79/632 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
+ +++ A+ +F+ + +R+ V WN M+ G+ +NG M F+ M P+ D FT+ +
Sbjct: 356 KCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTS 415
Query: 58 VIAGLM-----------------------------------QSDNVQGAKEVFDGMEVRD 82
+ + +S ++ A++ F+ M++ D
Sbjct: 416 IFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHD 475
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAES--- 135
V+WN++I GYV DEA +F M L D VS ++ A N Q + +
Sbjct: 476 NVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHC 535
Query: 136 YFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
++G + + +++ V+ G ++ AR +F MP+++V + N +IAGY G +
Sbjct: 536 LLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGY-TMGHLEE 594
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A LFQ++ L + GL++ D A L
Sbjct: 595 AIHLFQEIQMVGLKPTEVTFAGLLDG--CDGAFML----------------------NLG 630
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGE---VGSAIKVFELMTTRDVTVWNVMIFGLG 311
++ H + K+ + + + V + M V S EL + + VW +I G
Sbjct: 631 RQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYA 690
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+ + E+ L+F+ M+ PD A F SVL C+ + +L G++IH+ N
Sbjct: 691 QQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEV 750
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYHGYAEKALELFERMRLT 430
+++I MYA+CG+++ +L F +P +++ISWNS+I GLA +GYAE+ALE+F++M
Sbjct: 751 TCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQ 810
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
PD++TF+GVLSACS+AG V +GR FD M N Y LQPR H C+VD+LGR+G ++E
Sbjct: 811 SIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNE 870
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
A +N++ G + P +W LLGACR H + G+ A +++MEL+P +S Y++L+ +
Sbjct: 871 AEEFINKL---GCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSSSSYVLLSSI 927
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
Y A + +MK GVKK PG SWI+
Sbjct: 928 YAESENWSGAVSLRREMKLKGVKKLPGYSWIE 959
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 165/644 (25%), Positives = 303/644 (47%), Gaps = 88/644 (13%)
Query: 5 RIQEAQNLFDKMPQR----------------------DTVTWNVMIRGYFKNGFLDNAMC 42
RIQ A NLFD+ P+ + NV++ Y K G +D A
Sbjct: 39 RIQ-AHNLFDEKPKPVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQK 97
Query: 43 LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM---EVR-DVVTWNSMISGYVCNGL 98
F+++ ++D+F +N+V++ + + F M EVR + T+ ++S C+GL
Sbjct: 98 AFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSA--CSGL 155
Query: 99 IDEAL-RVFHGMPLKDVVSW-NLVIGALVN----CQRMDLAESYFKEMGARDVASWTIMV 152
D R H K + + G L++ C+ + A F D SWT ++
Sbjct: 156 QDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALI 215
Query: 153 NGLVREGRIVEARKLFDKMP----AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
G VR+G +EA K+FD+M A D ++ Y+ G + A LF ++ + ++
Sbjct: 216 AGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVV 275
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEK-TWNSIISVL--------IRNGLVKEAHS 259
+W +I+G + AIS+F ++ +T K T +S+ SVL + G + A +
Sbjct: 276 AWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQA 335
Query: 260 YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
E N+ + ++ Y + ++ +A +VF + R++ +WN M+ G +N L +E
Sbjct: 336 TKEGLD-DNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEV 394
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAM 376
++FF MK GP PD TFTS+ + C+ L L+ G Q+H IK N+F + V+NA+
Sbjct: 395 MEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIK---NKFASNLFVANAL 451
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+ MYA+ G ++ A +F + IHD +SWN+II G Y ++A +F RM PD+
Sbjct: 452 VDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDE 511
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI-------- 488
++ ++SAC+ + +G+ C+ K L + + ++D+ + G++
Sbjct: 512 VSLASIVSACANVQELKRGQQC-HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFY 570
Query: 489 ----------------------DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
+EA++L EI+ G++ + + LL C + +G
Sbjct: 571 SMPSRNVVSVNALIAGYTMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLG 630
Query: 527 EIAGERVME--LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+VM+ ++ V + L +Y++ R D++ +F++++
Sbjct: 631 RQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQ 674
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 145/626 (23%), Positives = 257/626 (41%), Gaps = 126/626 (20%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
R+ +A+ LF ++P + V WNVMI G+ K GF + A+ F ++ + + + + ++
Sbjct: 257 GRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVL 316
Query: 64 QS-----------------------DNV----------------QGAKEVFDGMEVRDVV 84
+ DNV AK+VF+ + R++V
Sbjct: 317 SAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIV 376
Query: 85 TWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
WN+M+ G+ NGL E + F M P D ++ + A + ++ M
Sbjct: 377 LWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVM 436
Query: 141 GARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
AS + N LV + G + EARK F+ M D +WN +I GY+
Sbjct: 437 IKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQ-------- 488
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL-----IRN 251
++ +D ++++++ V +P+ E + SI+S ++
Sbjct: 489 ---EEYNDEAFFMFRRMVSNGV--------------LPD--EVSLASIVSACANVQELKR 529
Query: 252 GLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
G ++ H L K ++ + +++I Y + G V +A VF M +R+V N +I G
Sbjct: 530 G--QQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGY 587
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK---IARN 367
L EE + F +++ G P TF +L C L+LGRQIH Q +K ++ +
Sbjct: 588 TMGHL-EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSS 646
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYHGYAEKALELFER 426
+ VS ++ +Y + FS + ++ W ++I G A + EKAL+ ++
Sbjct: 647 EMVCVS--LLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQH 704
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGR-----------------------YYFDCMK 463
MR + PD F VL AC+ + G+ Y C
Sbjct: 705 MRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGD 764
Query: 464 NKYFLQ-----PRSAH---YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
K LQ PR + + ++ L + G +EA+ + ++ I + +L
Sbjct: 765 VKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLS 824
Query: 516 ACRIHNNIKVGEIA-GERVMELEPNN 540
AC G ++ G +V +L NN
Sbjct: 825 ACS-----HAGRVSEGRKVFDLMVNN 845
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 140/301 (46%), Gaps = 7/301 (2%)
Query: 274 NVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
NVIV Y + G V A K F + +DV WN ++ ++ L ++ FV M
Sbjct: 80 NVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVR 139
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P+ TF VL+ CS L ++ GRQ+H K + +I MYA+C ++ A L
Sbjct: 140 PNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLV 199
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F D +SW ++I G G+ +A+++F+RM+ PD IT V V++A G +
Sbjct: 200 FDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRL 259
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
R F + N P + ++ + G +EA++ E++ G++ + + G+
Sbjct: 260 ADARKLFTQIPN-----PNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGS 314
Query: 513 LLGACRIHNNIKVGE-IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
+L A + + G + + E +N V L MY C + + AK++F + E
Sbjct: 315 VLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERN 374
Query: 572 V 572
+
Sbjct: 375 I 375
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 8/227 (3%)
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
L L + IH++++KI + N ++ +Y +CGN+ A FS + D+ +WNS+
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
+ HG ++ F M + +P++ TF VLSACS V+ GR C K
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGR-QVHCGVFKTG 172
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
RS ++D+ + + +A + + + + W AL+ A + + +
Sbjct: 173 FGFRSFCQGGLIDMYAKCRYLRDARLVFD----GALNLDTVSWTALI-AGYVRDGFPMEA 227
Query: 528 I-AGERVMELEPNNSGVYLI-LTEMYLSCGRREDAKRIFAQMKENGV 572
+ +R+ + + L+ + Y++ GR DA+++F Q+ V
Sbjct: 228 VKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNV 274
>gi|297828249|ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
gi|297327846|gb|EFH58266.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
Length = 606
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 282/536 (52%), Gaps = 29/536 (5%)
Query: 75 FDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVNCQR 129
F E+ D WN++I + +AL +F +G+ + D S +LV+ A C R
Sbjct: 71 FSPGEMEDPFLWNAVIKSHSHGKDPRQALLLFCLMLENGVSV-DKFSLSLVLKA---CSR 126
Query: 130 MDLAESYFKEMG-ARDVASWT------IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
+ + + G R W+ ++ ++ G + AR++FD+MP +D ++N M
Sbjct: 127 LGFVKGGMQIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGFARQMFDRMPQRDSVSYNSM 186
Query: 183 IAGYLDNGCVGVAEDLFQKMHD--RDLTSWKQLINGLV-NSRRIDAAISYFKQMPETCEK 239
I GY+ G + A +LF M ++L SW +I+G S ++ A F +MPE
Sbjct: 187 INGYVKCGLIESARELFDLMPREMKNLISWNSMISGYAQTSEGVNIASKLFAEMPEKDLI 246
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+WNS+I +++G +++A + P ++ + +I GY ++G V A +F+ M RD
Sbjct: 247 SWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQMPLRD 306
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
V +N M+ G +N E L+ F M KES SPD T +L+ + L L +H
Sbjct: 307 VVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKATDMH 366
Query: 359 AQAIKIARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+ I QF + A+I MY++CG+IQ A+L F + I WN++I GLA HG
Sbjct: 367 ---LYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAVHG 423
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
E A + ++ PDDITFVGVL+ACS++GLV +G F+ M+ K+ ++PR HY
Sbjct: 424 LGESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 483
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
C+VD+L R G I+ A NL+ E+ IE + +W L AC H + GE+ + ++
Sbjct: 484 GCMVDILSRSGSIELAKNLIEEMP---IEPNDVIWRTFLTACSHHKEFETGELVAKHLIL 540
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
N Y++L+ MY S G +D +R+ MKE ++K PGCSWI+++ H F
Sbjct: 541 QAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFF 596
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 211/420 (50%), Gaps = 32/420 (7%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGLMQSDNVQGAKEVF 75
D + +++++ + GF+ M + + + D+F N +I ++ + A+++F
Sbjct: 113 DKFSLSLVLKACSRLGFVKGGMQIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGFARQMF 172
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWNLVI-GALVNCQRMDL 132
D M RD V++NSMI+GYV GLI+ A +F MP +K+++SWN +I G + +++
Sbjct: 173 DRMPQRDSVSYNSMINGYVKCGLIESARELFDLMPREMKNLISWNSMISGYAQTSEGVNI 232
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A F EM +D+ SW M++G V+ GRI +A+ LFD MP +DV MI GY G V
Sbjct: 233 ASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFV 292
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSIISV 247
A+ LF +M RD+ ++ ++ G V ++ A+ F M + E T I+S
Sbjct: 293 HQAKTLFDQMPLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSA 352
Query: 248 LIRNGLVKEA---HSYL-EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+ + G + +A H Y+ EK Y +I Y + G + A+ VFE + + + W
Sbjct: 353 IAQLGRLSKATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHW 412
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLGRQ 356
N MI GL + LGE +Q++ PD+ TF VL CS L +L R+
Sbjct: 413 NAMIGGLAVHGLGESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRR 472
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYH 414
H ++ M+ + +R G+I+ A L+E + +D+I W + + ++H
Sbjct: 473 KHKIEPRLQH------YGCMVDILSRSGSIELAKNLIEEMPIEPNDVI-WRTFLTACSHH 525
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 193/397 (48%), Gaps = 25/397 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTVIAGLMQ-S 65
A+ +FD+MPQRD+V++N MI GY K G +++A LF+ MP +++ ++N++I+G Q S
Sbjct: 168 ARQMFDRMPQRDSVSYNSMINGYVKCGLIESARELFDLMPREMKNLISWNSMISGYAQTS 227
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
+ V A ++F M +D+++WNSMI GYV +G I++A +F MP +DVV+ +I
Sbjct: 228 EGVNIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYA 287
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP-----AKDVQAWN 180
+ A++ F +M RDV ++ M+ G V+ +EA ++F+ M + D
Sbjct: 288 KLGFVHQAKTLFDQMPLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLV 347
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN----SRRIDAAISYFKQMPET 236
++++ G + A D+ + ++ +L L++ I A+ F+ +
Sbjct: 348 IILSAIAQLGRLSKATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK 407
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI----ASWTNVIVGYFEMGEVGSAIKVF 292
WN++I L +GL + A + L + +I ++ V+ G V + F
Sbjct: 408 SIDHWNAMIGGLAVHGLGESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCF 467
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEG-LKFFVQMKESGP-SPDNATFTSVLTICSDLPT 350
ELM + + +G + L G ++ + E P P++ + + LT CS
Sbjct: 468 ELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKE 527
Query: 351 LDLGRQIHAQAIKIA---RNQFTTVSNAMITMYARCG 384
+ G + I A + + +SN MYA G
Sbjct: 528 FETGELVAKHLILQAGYNPSSYVLLSN----MYASFG 560
>gi|357518009|ref|XP_003629293.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523315|gb|AET03769.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 672
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 176/635 (27%), Positives = 307/635 (48%), Gaps = 61/635 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R + +A LFD+MPQ + +WN +I + G + ++ LF+ MP + +++N +++
Sbjct: 42 RRGSLHDASKLFDEMPQPNPFSWNTLIEAHINLGHRNKSLELFHAMPHKTHYSWNLIVST 101
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL-------KDV 114
L +S ++Q A+ +F+ M +++ + WNSMI GY +G +L +F M L +D
Sbjct: 102 LSKSGDLQQAQALFNAMPMKNPLVWNSMIHGYSRHGYPRNSLLLFKEMNLDPLETVHRDA 161
Query: 115 VSWNLVIGALVNCQRMDLAE------------------------SYFKEMGARDVA---- 146
+ V GA + +D + +++ + G D A
Sbjct: 162 FVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVV 221
Query: 147 ---------SWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
S + +V+G GR+ +ARK+FD WN +I+GY+ NG A
Sbjct: 222 GFVKEVDDFSLSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALA 281
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAA---ISYFKQMPETCEK---TWNSIISVLIRN 251
LF KM R W + + N I ++ + KQM + K T + +++ + +
Sbjct: 282 LFNKM--RRNGVWGDF-SAVANILSISSSLLNVELVKQMHDHAFKIGATHDIVVASTLLD 338
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVG-----YFEMGEVGSAIKVFELMTTRDVTVWNVM 306
K H + + + + +++ Y G V A +VF M + + WN +
Sbjct: 339 AYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSI 398
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
+ GL +N E L F M + D +F SV++ C+ +L+LG Q+ +AI +
Sbjct: 399 LVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAITLGL 458
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
+ +++ Y +CG ++ F + D +SWN+++ G A +GY +AL LF
Sbjct: 459 ESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNE 518
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
M + +P ITF G+LSAC + GLV++GR F MK+ Y + P HY+C+VDL R G
Sbjct: 519 MGYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVDLFARVG 578
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
EAM L+ E+ + +W ++L C H N +G++A E++++L+P NSG Y+
Sbjct: 579 CFGEAMYLIEEMP---FQADANMWLSVLRGCVSHGNKTIGKMAAEKIIQLDPGNSGAYIQ 635
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
L+ + + E + + M+ V+K PGCSW+
Sbjct: 636 LSNILATSEDWEGSAEVRELMRNKNVQKIPGCSWM 670
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 144/367 (39%), Gaps = 50/367 (13%)
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
T N ++ + R G + +A ++ P N SW +I + +G ++++F M +
Sbjct: 32 TTNRLLQLYSRRGSLHDASKLFDEMPQPNPFSWNTLIEAHINLGHRNKSLELFHAMPHKT 91
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGP--------------SPDNA--------- 336
WN+++ L ++ ++ F M P P N+
Sbjct: 92 HYSWNLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNSMIHGYSRHGYPRNSLLLFKEMNL 151
Query: 337 -----------TFTSVLTICSDLPTLDLGRQIHAQAI--KIARNQFTTVSNAMITMYARC 383
++V C+DL LD G+Q+HA+ Q + ++++ Y +C
Sbjct: 152 DPLETVHRDAFVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKC 211
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G++ SA V D S ++++ G A G A ++F+ P + + ++
Sbjct: 212 GDLDSAARVVGFVKEVDDFSLSALVSGYANAGRMSDARKVFD----NKVDPCSVLWNSII 267
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRS--AHYTCVVDLLGRFGLIDEAMNLLNEIRA- 500
S G + F+ M+ S A+ + L L+ + + +I A
Sbjct: 268 SGYVSNGEEMEALALFNKMRRNGVWGDFSAVANILSISSSLLNVELVKQMHDHAFKIGAT 327
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
I V+ T+ A H++ K+ EL+ ++ + + +Y +CGR EDA
Sbjct: 328 HDIVVASTLLDAYSKCQHPHDSCKL-------FHELKVYDAILLNTMITVYCNCGRVEDA 380
Query: 561 KRIFAQM 567
K +F M
Sbjct: 381 KEVFNSM 387
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 140/355 (39%), Positives = 218/355 (61%), Gaps = 3/355 (0%)
Query: 268 NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
++ SW +I GY + E+G A VF+ M RDV WN MI G E L F QM+
Sbjct: 231 DVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMR 290
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
G P AT S+L+ C+ L LD G +H + V A++ MYA+CG I
Sbjct: 291 AVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKIS 350
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
A F+++ D+++WN+II G+A HG ++A +LF+ M+ +P+DITFV +LSACS
Sbjct: 351 LATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACS 410
Query: 448 YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
+AG+VD+G+ DCM + Y ++P+ HY CV+DLL R G ++EAM L+ + +E +P
Sbjct: 411 HAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMP---MEPNP 467
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ GALLG CRIH N ++GE+ G+R++ L+P +SG Y++L+ +Y + + +DA+++ M
Sbjct: 468 SALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLM 527
Query: 568 KENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILFDA 622
K NG+ K PG S I++ H F++GD SHP+ +++ LN +HT ++ I + A
Sbjct: 528 KVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSA 582
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 38/294 (12%)
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A +F + +++N +I L + E L + M +SG PD+ T+ V+ C++
Sbjct: 119 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 178
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
G +H +K + + +++I +YA ++ +A F+ D++SWN++
Sbjct: 179 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 238
Query: 408 ICGLAYH--------------------------GYA-----EKALELFERMRLTDFKPDD 436
I G H GYA +AL LF++MR KP +
Sbjct: 239 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTE 298
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
T V +LSAC++ G +D+G + N ++ S T +VD+ + G I A + N
Sbjct: 299 ATVVSLLSACAHLGALDKG-LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFN 357
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYLILT 548
+ + + W ++ IH N+K + + + E +EPN+ IL+
Sbjct: 358 AMESKDV----LAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILS 407
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 27/291 (9%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D+ + +I Y L A LFN RD+ ++N +I G ++ + A+ VFD M
Sbjct: 200 DSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMV 259
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGM------PLKDVVSWNLVIGALVNCQRMDLA 133
RDV++WN+MI+GY G +EAL +F M P + V L A + L
Sbjct: 260 CRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLH 319
Query: 134 ESYFKEMGARDVAS--WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
+ +V S T +V+ + G+I A ++F+ M +KDV AWN +IAG +G
Sbjct: 320 LHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGN 379
Query: 192 VGVAEDLFQKMHD-----RDLTSWKQLI----NGLVN--SRRIDAAISYFKQMPETCEKT 240
V A+ LF++M + D+T L G+V+ + +D S + P+ +
Sbjct: 380 VKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKV--EH 437
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIV------GYFEMGEV 285
+ +I +L R G ++EA + P S ++ G FE+GE+
Sbjct: 438 YGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEM 488
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+++ + A+ +FD+M RD ++WN MI GY G + A+ LF+QM + +
Sbjct: 243 VKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVV 302
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWN----------SMISGYVCNGLIDEALRVFHGMP 110
L+ + GA + G+ + + N +++ Y G I A +VF+ M
Sbjct: 303 SLLSACAHLGALD--KGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAME 360
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVEARK 166
KDV++WN +I + + A+ FKEM V ++ +++ G + E +K
Sbjct: 361 SKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQK 420
Query: 167 LFDKM 171
L D M
Sbjct: 421 LLDCM 425
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 183/650 (28%), Positives = 322/650 (49%), Gaps = 51/650 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNT 57
R A A+ +FD+MP R+ V+W +I + +NG +A+ LF+ M D F +
Sbjct: 98 RCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGS 157
Query: 58 VIAGLMQSDNVQGAKEV----FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+ + +V ++V D++ N++++ Y NGL+D+ +F + KD
Sbjct: 158 AVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKD 217
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM------------------GARDVASWTI--MVN 153
++SW +I A F+EM V SW ++
Sbjct: 218 LISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIH 277
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL 213
GL + R+ R L+ D+ A LD+ V F ++ DL SW +
Sbjct: 278 GLSIKYRL--DRDLYVGCSLSDMYAR----CKNLDSARVA-----FYRIEAPDLVSWNSI 326
Query: 214 INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA-------HSYLEKYPY 266
+N + A+ F +M ++ + + L+ + ++A HSYL K
Sbjct: 327 VNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGL 386
Query: 267 SNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
S N ++ Y ++ SA+ VF + +DV WN ++ +++ EE LK F
Sbjct: 387 DGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSL 446
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
+ +S PS D + +VL+ ++L ++ +Q+HA A K +SN +I YA+CG+
Sbjct: 447 LNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGS 506
Query: 386 IQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+ A+ F + + D+ SW+S+I G A GYA++A +LF RMR +P+ +TF+GVL+
Sbjct: 507 LDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLT 566
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
ACS G V++G YY+ M+ +Y + P H +C+VDLL R G + EA N ++++ E
Sbjct: 567 ACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMP---FE 623
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+W LL A ++HN++++G+ A E ++ ++P++S Y++L +Y + G + R+
Sbjct: 624 PDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLK 683
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
M+ +GVKK PG SW+++ VF+ D SHP+ + +L L+ E+
Sbjct: 684 KAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEM 733
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 186/449 (41%), Gaps = 42/449 (9%)
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAES 135
D + V N +I+ Y D A +VF MP ++ VSW VI A V R A
Sbjct: 79 DAQLAGNTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALG 138
Query: 136 YFKEMGARDVASWTIMVNGLVRE---------GRIVEARKLFDKMPAKDVQAWNLMIAGY 186
F M A+ + VR GR V A L + D+ N ++ Y
Sbjct: 139 LFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSER-GSDLIVQNALVTMY 197
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII- 245
NG V LF+++ D+DL SW +I G A+ F++M N
Sbjct: 198 SKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHF 257
Query: 246 -SVLIRNGLV------KEAHSYLEKYPYSNIASWTNVIVG------YFEMGEVGSAIKVF 292
S G V ++ H KY ++ VG Y + SA F
Sbjct: 258 GSAFRACGAVGSWEYGEQIHGLSIKYRLDR-----DLYVGCSLSDMYARCKNLDSARVAF 312
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ D+ WN ++ L E L F +M++SG PD T +L C L
Sbjct: 313 YRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALY 372
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
GR IH+ +K+ + +V N++++MYARC ++ SA+ F + D+++WNSI+ A
Sbjct: 373 HGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACA 432
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN------KY 466
H + E+ L+LF + ++ D I+ VLSA + G YF+ +K K
Sbjct: 433 QHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELG-------YFEMVKQVHAYAFKA 485
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
L ++D + G +D+AM L
Sbjct: 486 GLVDDRMLSNTLIDTYAKCGSLDDAMRLF 514
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 144/356 (40%), Gaps = 32/356 (8%)
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+ LV + S + N ++I Y SA +VF+ M R+ W +I
Sbjct: 66 VHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIA 125
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
+N + L F M SG + D S + C++L + GRQ+HA A+K R
Sbjct: 126 AHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGS 185
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
V NA++TMY++ G + + F + D+ISW SII G A G+ +AL++F M
Sbjct: 186 DLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMI 245
Query: 429 LT-DFKPDDITFVGVLSACSYAGLVDQGR--------------YYFDCMKNKYFLQ---- 469
+ P++ F AC G + G Y C + + +
Sbjct: 246 VEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNL 305
Query: 470 ------------PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
P + +V+ GL+ EA+ L +E+R G+ LL AC
Sbjct: 306 DSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCAC 365
Query: 518 RIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+ + G + +++L + + V L MY C A +F ++K+ V
Sbjct: 366 VGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDV 421
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 24/191 (12%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAI---------KIARNQFTTVSNAMITMYARCGNIQS 388
+ ++++ CS L +L GR++H + ++A N T + N +ITMY RC S
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGN--TVLGNHLITMYGRCAAPDS 104
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F +P + +SW S+I +G A AL LF M + D + AC+
Sbjct: 105 ARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTE 164
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAH----YTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
G V GR + + L+ +V + + GL+D+ L I+ +
Sbjct: 165 LGDVGTGR-----QVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDL- 218
Query: 505 VSPTVWGALLG 515
WG+++
Sbjct: 219 ---ISWGSIIA 226
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 295/568 (51%), Gaps = 32/568 (5%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVT----WNSMISGYVCNGLIDEALRVFH--GM 109
N ++ +Q+ +++ A ++ + + + + +N++I+ Y G +++AL +F
Sbjct: 146 NHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHH 205
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR----DVASWTIMVNGLVREGRIVEAR 165
K +V+W +I L + A S F +M + +++ +++ ++ +
Sbjct: 206 HFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQ 265
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE-----DLFQKMHDRDLTSWKQLINGLVNS 220
+L + A N+ + L + A+ +F +M +R+L SW +I G ++
Sbjct: 266 QLHSLIHKHGFDA-NIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHN 324
Query: 221 RRIDAAISYFKQ-------MPETCEKTWNSIISVLIRNG---LVKEAHSYLEKYPYSNIA 270
D A+ FK +P E + +S++S G ++ H + KY +
Sbjct: 325 NLYDRAVGVFKDVLREKTVIPN--EVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLT 382
Query: 271 SWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
N ++ YF+ +K+F+ + RDV WNV++ G +ND EE +F M+
Sbjct: 383 YVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRRE 442
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G PD A+F++VL + L L G IH Q IK+ + + ++ITMYA+CG++ A
Sbjct: 443 GILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDA 502
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F + H++ISW ++I HG A + +ELFE M +P +TFV VLSACS+
Sbjct: 503 YQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHT 562
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
G V++G +F+ MK + + P HY C+VDLLGR G +DEA + + ++ +P+V
Sbjct: 563 GRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESM---PMKPTPSV 619
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
WGALLGACR + N+K+G A ER+ E+EP N G Y++L M GR E+A + M
Sbjct: 620 WGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGV 679
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSH 597
NGV+KEPGCSWI + + VF + D SH
Sbjct: 680 NGVRKEPGCSWIDVKNMTFVFTAHDRSH 707
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 148/337 (43%), Gaps = 67/337 (19%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
A + A +FD+MP+R+ V+WN MI G+F N D A+ +F +D+ TVI +
Sbjct: 294 ADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVF-----KDVLREKTVIPNEV 348
Query: 64 QSDNVQGAKEVFDGM----EVRDVV----------TWNSMISGYVCNGLIDEALRVFHGM 109
+V A G+ +V VV NS++ Y DE +++F +
Sbjct: 349 SVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCV 408
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYF----KEMGARDVASWTIMVN------------ 153
+DVV+WN+++ V + + A +YF +E D AS++ +++
Sbjct: 409 GDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGT 468
Query: 154 ---------GLVRE--------------GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
G V+ G +V+A ++F+ + +V +W MI+ Y +G
Sbjct: 469 AIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHG 528
Query: 191 CVGVAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMPETCE-----KTW 241
C +LF+ M + ++ +++ ++ R++ +++F M + + + +
Sbjct: 529 CANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHY 588
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
++ +L R G + EA ++E P S ++G
Sbjct: 589 ACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLG 625
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 112/543 (20%), Positives = 207/543 (38%), Gaps = 118/543 (21%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG------------- 61
+ VTW +I A+ LFNQM P + FT++++++
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267
Query: 62 ----------------------LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLI 99
+ ++ A VFD M R++V+WNSMI G+ N L
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLY 327
Query: 100 DEALRVFHGM-----PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNG 154
D A+ VF + + + VS + V+ A N ++ + + T ++N
Sbjct: 328 DRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNS 387
Query: 155 LVR---EGRIV-EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
L+ + R E KLF + +DV WN+++ G++ N A + F M +
Sbjct: 388 LMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPD 447
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
+ + +++S A+++ Q +I +I+ G VK N+
Sbjct: 448 EASFSTVLHS---SASLAALHQ--------GTAIHDQIIKLGYVK------------NMC 484
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
++I Y + G + A +VFE + +V W MI + + ++ F M G
Sbjct: 485 ILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEG 544
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
P + TF VL+ CS G ++ L
Sbjct: 545 IEPSHVTFVCVLSACS-----------------------------------HTGRVEEGL 569
Query: 391 LEFSSV-PIHDIIS----WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
F+S+ IHD+ + ++ L G+ ++A E M + KP + +L A
Sbjct: 570 AHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPM---KPTPSVWGALLGA 626
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQP-RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
C G + GR + + + ++P +Y + ++ R G ++EA + + +G+
Sbjct: 627 CRKYGNLKMGR---EAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVR 683
Query: 505 VSP 507
P
Sbjct: 684 KEP 686
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 316 GEEGLKFFVQ-MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
G LKFF + + + PSP +L +L QIH Q I + N
Sbjct: 122 GPSPLKFFHKGLSPTPPSPSPTHLNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFN 181
Query: 375 AMITMYARCGNIQSALLEFSSVPIH--DIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+I +YA+CG + ALL FS H I++W S+I L++ +AL LF +MR +
Sbjct: 182 NLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGP 241
Query: 433 KPDDITFVGVLSACSYAGLVDQGR 456
P+ TF +LSA + +V G+
Sbjct: 242 YPNQFTFSSILSASAATMMVLHGQ 265
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 54/272 (19%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVI---- 59
E LF + RD VTWNV++ G+ +N + A F M D +++TV+
Sbjct: 400 EGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSA 459
Query: 60 --AGLMQSDNVQG-----------------------------AKEVFDGMEVRDVVTWNS 88
A L Q + A +VF+G+E +V++W +
Sbjct: 460 SLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTA 519
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEMGA-R 143
MIS Y +G ++ + +F M + + V++ V+ A + R++ ++F M
Sbjct: 520 MISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIH 579
Query: 144 DV----ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA-WNLMIAGYLDNGCVGV---- 194
D+ + MV+ L R G + EA++ + MP K + W ++ G + +
Sbjct: 580 DMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREA 639
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
AE LF+ M + ++ L N S R++ A
Sbjct: 640 AERLFE-MEPYNPGNYVLLANMCTRSGRLEEA 670
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 185/663 (27%), Positives = 313/663 (47%), Gaps = 78/663 (11%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM--- 63
Q A+ +FD M R+ V W MI Y + G D A ++N M + + + + GL+
Sbjct: 100 QSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGV 159
Query: 64 ---------------------------------QSDNVQGAKEVFDGMEVRDVVTWNSMI 90
+ V+ A+ +F+ M+ RDV++WNS++
Sbjct: 160 LELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLV 219
Query: 91 SGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMD-------LAESYFKEMG-A 142
SGY G I E L++ M + G+LV+ M + + G
Sbjct: 220 SGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLE 279
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
+D T ++ ++ G + A ++F+ M KDV +W MI+G + N C +A +F++M
Sbjct: 280 QDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRM 339
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG---LVKEAHS 259
+ SR MP T T S+++ G L H
Sbjct: 340 ---------------LKSR----------VMPST--ATIASVLAACAELGSFPLGTSVHG 372
Query: 260 Y-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
Y L + +I S +++ Y + G + + VF+ M+ RD+ WN ++ G +N +
Sbjct: 373 YILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCK 432
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L F +M+++ PD+ T S+L C+ + L G+ IH K + A++
Sbjct: 433 ALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVD 492
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MY++CG++ SA F +P D++SW+SII G HG E AL ++ T +P+ +
Sbjct: 493 MYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVI 552
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
++ +LSACS+ GLVDQG +F M + ++PR H C+VDLL R G ++EA + +
Sbjct: 553 YLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRM 612
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
+ S V G LL ACR N+++G+I ++ L+P N+G Y+ L Y S R +
Sbjct: 613 FP---KPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWD 669
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREI 618
++ QMK +KK PG S+I+++ F + SSHP+F + +L +L +E+ +
Sbjct: 670 GVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSSHPQFEEIMLVLKILGSEMRKVG 729
Query: 619 LFD 621
+ D
Sbjct: 730 IHD 732
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 208/440 (47%), Gaps = 15/440 (3%)
Query: 72 KEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMD 131
+ + DG D S+I+ Y G A +VF M ++VV W +IG D
Sbjct: 73 RVIVDGYS-SDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHD 131
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREG-RIVEARKLFDKMP----AKDVQAWNLMIAGY 186
+A S + M + + ++ + GL+ +V + L + DV N M+ Y
Sbjct: 132 VAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVY 191
Query: 187 LDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWN 242
G V A+ LF+ M RD+ SW L++G I + +M E ++T+
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFG 251
Query: 243 SIISVLI---RNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTR 298
S++S + G+ K H ++ + + ++G Y + G V SA ++FE M +
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
DV W MI GL +ND + + F +M +S P AT SVL C++L + LG +H
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVH 371
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
++ N+++TMYA+CG+++ + F + DI+SWN+I+ G A +G+
Sbjct: 372 GYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLC 431
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
KAL LF MR +PD IT V +L AC+ G + QG++ + + K L P T +
Sbjct: 432 KALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFV-TKSCLGPCILIDTAL 490
Query: 479 VDLLGRFGLIDEAMNLLNEI 498
VD+ + G + A + +
Sbjct: 491 VDMYSKCGDLGSAQKCFDRM 510
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 177/385 (45%), Gaps = 40/385 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNT 57
+ R+++AQ LF+ M RD ++WN ++ GY + G + + L +M E D T+ +
Sbjct: 193 KCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGS 252
Query: 58 VI-AGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
++ A MQS G ++ G +R D S+I Y+ G ++ A R+F GM
Sbjct: 253 LVSAAAMQSK--LGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMH 310
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVN--------------GLVR 157
KDV+SW +I LV D+A + F+ M V T + G
Sbjct: 311 KDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSV 370
Query: 158 EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL 217
G I+ R D +P+++ G+L+ C +F +M RD+ SW +++G
Sbjct: 371 HGYILRQRIKLD-IPSQNSLVTMYAKCGHLEQSC-----SVFDRMSRRDIVSWNAIVSGH 424
Query: 218 VNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEA---HSYLEKYPYSN-I 269
+ + A+ F +M + ++ T S++ G + + H+++ K I
Sbjct: 425 AQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCI 484
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
T ++ Y + G++GSA K F+ M +D+ W+ +I G G + GE L+ + +
Sbjct: 485 LIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHT 544
Query: 330 GPSPDNATFTSVLTICSDLPTLDLG 354
G P++ + S+L+ CS +D G
Sbjct: 545 GIQPNHVIYLSILSACSHNGLVDQG 569
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 118/279 (42%), Gaps = 30/279 (10%)
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
+ M + PD TF S++ C+ L G H + I + + ++ ++I Y++
Sbjct: 36 YSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSK 95
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
G+ QSA F ++ +++ W ++I G + A ++ MR +P +T +G+
Sbjct: 96 FGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGL 155
Query: 443 LSA--------CSYAGLVDQG----RYYFDCMKNKYFLQPRSAHYTCVVDLL-------- 482
LS C +A ++ G + M N Y R + +L+
Sbjct: 156 LSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISW 215
Query: 483 -------GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
+ G I E + LL ++ DGIE +G+L+ A + + + VG++ ++
Sbjct: 216 NSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILR 275
Query: 536 --LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LE +S + L MYL CG A RIF M V
Sbjct: 276 AGLE-QDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDV 313
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 193/652 (29%), Positives = 319/652 (48%), Gaps = 56/652 (8%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGY----FKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
R+ +AQ RD NV+IRG L + D FT+ V+
Sbjct: 57 RMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARPDRFTFPVVLK 116
Query: 61 -----GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
G + + + G+ DV T NS+++ Y GL+D+A RVF GMP +DVV
Sbjct: 117 CCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPARDVV 176
Query: 116 SWNLVIGALVNCQRMDLAESYFKEM---------GARDVASWT-IMVNGLVREGRIVEAR 165
+WN ++ V+ LA F+EM G +A+ + + +GR V A
Sbjct: 177 TWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREVHAY 236
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
+ M DV+ ++ Y G + AE +F M R + +W +I G + R +
Sbjct: 237 VIRHGM-EHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEE 295
Query: 226 AISYFKQMPE---------------TCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNI 269
A F QM C +T +S+ + H Y+ + + ++
Sbjct: 296 AFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYG--------RSVHGYITRRQFLPHV 347
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
T ++ Y ++G+V S+ KVF MTT+ + WN MI ++ E + F+ +
Sbjct: 348 VLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQ 407
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
PD T ++V+ L L RQ+H+ I++ + T + NA++ MYARCG++ S+
Sbjct: 408 PLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSS 467
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F + D+ISWN++I G A HG ALE+F M+ +P++ TFV VL+ACS +
Sbjct: 468 REIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVS 527
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT- 508
GL D+G F+ M+ Y + P+ HY C+ DLLGR G + E M + + + + PT
Sbjct: 528 GLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFI-----ENMPIDPTF 582
Query: 509 -VWGALLGACRIHNNIKVGEIAGERVMELEP-----NNSGVYLILTEMYLSCGRREDAKR 562
VWG+LL A R N+I + E A ER+ +LE +N+G Y++++ MY GR +D +R
Sbjct: 583 RVWGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVER 642
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
I + M+E G+++ S ++++ F++GD++HP+ ++ + N L +I
Sbjct: 643 IKSLMEEKGLRRTDPRSIVELHGISCSFVNGDTTHPQSKMIQEVSNFLSGKI 694
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 141/343 (41%), Gaps = 65/343 (18%)
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++++ + G + A + +RD + NV+I GL + L L + M +G P
Sbjct: 47 SLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARP 106
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKI---ARNQFTTVSNAMITMYARCGNIQSAL 390
D TF VL C+ L LD GR H+ AI++ A + +T N+++ YAR G + A
Sbjct: 107 DRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYT--GNSLLAFYARLGLVDDAE 164
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR-LTDFKPDDITFVGVLSACSYA 449
F +P D+++WNS++ G +G AL F M + + D + + L+AC
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLE 224
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAH----YTCVVDLLGRFGLI----------------- 488
+ QGR + Y ++ H T ++D+ + G I
Sbjct: 225 SALMQGREV-----HAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVT 279
Query: 489 --------------DEAMNLLNEIRADGIEVSPTVWGALLGAC----------RIHNNIK 524
+EA + +++A+G +V LL AC +H I
Sbjct: 280 WNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYIT 339
Query: 525 VGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ V+E L EMY G+ + ++++F QM
Sbjct: 340 RRQFLPHVVLETA---------LLEMYSKVGKVKSSEKVFGQM 373
>gi|345505214|gb|AEN99831.1| chlororespiratory reduction 4 [Brassica rapa]
Length = 612
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 279/532 (52%), Gaps = 29/532 (5%)
Query: 79 EVRDVVTWNSMISGYVC-----NGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLA 133
EV D WN +I + L L + +G+P+ D S++L AL C R+
Sbjct: 89 EVEDPFLWNVVIKSHSHGVDPRKALFLLCLMLENGVPV-DKFSFSL---ALKACSRLGFV 144
Query: 134 ESYFKEMGAR-DVASWT------IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
+ + G +W+ ++ ++ G + AR++FD+MP +D ++N MI GY
Sbjct: 145 KEGTQVHGFLIKTGTWSDLFLQNCLIGLYIKCGCLGFARQVFDRMPQRDSVSYNSMIDGY 204
Query: 187 LDNGCVGVAEDLFQKM--HDRDLTSWKQLINGLVN-SRRIDAAISYFKQMPETCEKTWNS 243
L G V A +LF M R+L +W +I G + ++ A F +MPE +WNS
Sbjct: 205 LKCGLVESAGELFGLMPREKRNLITWNSMIGGYAQRADGVNVAAKLFDEMPEKDLISWNS 264
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+I +++G +++A + P ++ +W +I GY ++G V A +F+ M RDV V+
Sbjct: 265 MIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVHEAKTLFDQMPHRDVVVY 324
Query: 304 NVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
N M+ G +N E L+ F M KES +PD + VL+ + L L +H +
Sbjct: 325 NSMMSGXVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAXAQLGRLSKAIDMH---L 381
Query: 363 KIARNQFTTVSN---AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
I QF + A+I MY++CG+IQ A+ F + I WN++I GLA HG E
Sbjct: 382 YIVEKQFPSSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGES 441
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A ++ ++ KPD ITFVGVL+ACS++GLV +G F+ M+ K+ ++PR HY C+V
Sbjct: 442 AFDMLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMV 501
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
D+L R G I+ A NL I IE + +W L AC H + GE+ + ++
Sbjct: 502 DILARSGSIELAKNL---IEGMPIEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGY 558
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
N Y++L+ MY S G +D +R+ MKE ++K PGCSWI+++ H FL
Sbjct: 559 NPSSYVLLSNMYASNGMWKDVRRVRTMMKEKNIEKIPGCSWIELDGRVHEFL 610
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 198/388 (51%), Gaps = 34/388 (8%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D+F N +I ++ + A++VFD M RD V++NSMI GY+ GL++ A +F MP
Sbjct: 162 DLFLQNCLIGLYIKCGCLGFARQVFDRMPQRDSVSYNSMIDGYLKCGLVESAGELFGLMP 221
Query: 111 L--KDVVSWNLVIGALVNCQRMD---LAESYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
+++++WN +IG QR D +A F EM +D+ SW M+ G V+ GRI +A+
Sbjct: 222 REKRNLITWNSMIGGYA--QRADGVNVAAKLFDEMPEKDLISWNSMIGGYVKHGRIEDAK 279
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
LFD MP +DV W +MI GY G V A+ LF +M RD+ + +++G V +R
Sbjct: 280 GLFDVMPRRDVVTWAIMIDGYGKLGLVHEAKTLFDQMPHRDVVVYNSMMSGXVQNRYHME 339
Query: 226 AISYFKQMPETCEKTWNS-----IISVLIRNGLVKEA---HSYL--EKYPYSNIASWTNV 275
A+ F M + T + ++S + G + +A H Y+ +++P S +
Sbjct: 340 ALEVFNHMEKESHLTPDETSLVIVLSAXAQLGRLSKAIDMHLYIVEKQFPSSGKLG-VAL 398
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
I Y + G + A++VFE + ++ + WN MI GL + LGE +Q++ PD+
Sbjct: 399 IDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIERRSIKPDH 458
Query: 336 ATFTSVLTICSD-------LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
TF VL CS L +L R+ H ++ M+ + AR G+I+
Sbjct: 459 ITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQH------YGCMVDILARSGSIEL 512
Query: 389 A--LLEFSSVPIHDIISWNSIICGLAYH 414
A L+E + +D+I W + + ++H
Sbjct: 513 AKNLIEGMPIEPNDVI-WRTFLTACSHH 539
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 148/312 (47%), Gaps = 32/312 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R + A LFD+MP++D ++WN MI GY K+G +++A LF+ MP RD+ T+ +I G
Sbjct: 240 RADGVNVAAKLFDEMPEKDLISWNSMIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDG 299
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP-----LKDVVS 116
+ V AK +FD M RDVV +NSM+SG V N EAL VF+ M D S
Sbjct: 300 YGKLGLVHEAKTLFDQMPHRDVVVYNSMMSGXVQNRYHMEALEVFNHMEKESHLTPDETS 359
Query: 117 WNLVIGALVNCQRMDLA--------ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
+V+ A R+ A E F G VA +++ + G I A ++F
Sbjct: 360 LVIVLSAXAQLGRLSKAIDMHLYIVEKQFPSSGKLGVA----LIDMYSKCGSIQHAMRVF 415
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRID 224
+ + +K + WN MI G +G A D+ ++ R D ++ ++N +S +
Sbjct: 416 EGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFVGVLNACSHSGLVK 475
Query: 225 AAISYFKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVG 278
+ F+ M E + + ++ +L R+G ++ A + +E P N W +
Sbjct: 476 EGLLCFELMRRKHKIEPRLQHYGCMVDILARSGSIELAKNLIEGMPIEPNDVIWRTFLTA 535
Query: 279 -----YFEMGEV 285
FE GE+
Sbjct: 536 CSHHKEFETGEL 547
>gi|449493040|ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Cucumis sativus]
Length = 1096
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 194/646 (30%), Positives = 317/646 (49%), Gaps = 63/646 (9%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N +I Y K+G L++A LF++MPER++F++N +IA ++S N++ A+ +FD +D+V
Sbjct: 450 NQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSQNLRQARALFDSAVCKDLV 509
Query: 85 TWNSMISGYV-CNGLIDEALRVFHGMPLKD---------------------VVSW----- 117
T+NSM+SGY +G +AL F M V+S+
Sbjct: 510 TYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITMLNLTAKLCVISYGKQLH 569
Query: 118 --------NLVIGALVNCQRMDLAESYFKEMG--------ARDVASWTIMVNGLVREGRI 161
+L + A + M +FKE D S MV REG I
Sbjct: 570 SFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSVSRNAMVAACCREGEI 629
Query: 162 VEARKLF-DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL----TSWKQLING 216
A LF ++ DV AWN MI+G++ NG + LF +M D + ++ +++
Sbjct: 630 DVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFVRMADEKVGWNEHTFASVLSA 689
Query: 217 LVNSRRIDAAISYFKQM--------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
N R + + P C + ++ V + ++ A S + N
Sbjct: 690 CSNLRSLKLGKEVHAYVLKNRLIANPFIC----SGLVDVYCKCNNMRYAESVNSELRMQN 745
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ S T++IVGY G + A K+F+ + ++ VW + FG + E + + ++
Sbjct: 746 VYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTALFFGYVKLQQCEAVFELLSEYRK 805
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
PD S++ C+ L G+QIH+ ++ T ++++++ MY++CG+I
Sbjct: 806 EAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIY 865
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F V D I +N +I G A+HG+ +A++LF+ M FKPD ITFV +LSAC +
Sbjct: 866 AERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFVALLSACRH 925
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
GLV+ G ++FD M N Y + P HY C++DL GR +D+A+ + +I I++
Sbjct: 926 GGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFMRKIP---IQLDAV 982
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+WGA L ACRI+ N ++ A + ++ +E N Y+ L +Y + G E+ RI +MK
Sbjct: 983 IWGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVYAAEGNWEEMGRIRKKMK 1042
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
VKK GCSW+ + HVF+SGD H K + L L E+
Sbjct: 1043 GKEVKKNAGCSWVFVESKFHVFISGDRFHSKNEAIYSTLASLTDEL 1088
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+T+ + ++ L G H Q IK +SN +IT YA+ G + A F +P
Sbjct: 414 YTAGRLVFHEMKHLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMP 473
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
++ SWN+II +A LF+ D + G + Y G
Sbjct: 474 ERNVFSWNAIIAAYVKSQNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQG 526
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 189/621 (30%), Positives = 310/621 (49%), Gaps = 37/621 (5%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYN 56
+ ++ A +FD+M +D ++W M+ GY +G + L ++M + + N
Sbjct: 274 KCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVN 333
Query: 57 TVIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
+V+A ++ +++ KEV + GM D+V ++S Y G + +A F +
Sbjct: 334 SVLAA-TETRDLEKGKEVHNYALQLGM-TSDIVVATPIVSMYAKCGELKKAKEFFLSLEG 391
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
+D+V W+ + ALV A S F+EM + +++ LV + + +L M
Sbjct: 392 RDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMM 451
Query: 172 P--------AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
D+ +++ Y A LF +MH +D+ +W LING
Sbjct: 452 HCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDP 511
Query: 224 DAAISYFKQMPET-CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI-----ASWTNVIV 277
A+ F ++ + + +++S+L L+ + YL + NI S +V V
Sbjct: 512 RLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDL--YLGICFHGNIIKNGIESEMHVKV 569
Query: 278 GYFEM----GEVGSAIKVFEL-MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+M G + +A +F L +D WNVMI G N E + F QMK
Sbjct: 570 ALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVR 629
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P+ TF ++L S L L HA I++ T + N++I MYA+ G + +
Sbjct: 630 PNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKC 689
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F + ISWN+++ G A HG E AL LF M+ T D ++++ VLSAC +AGL+
Sbjct: 690 FHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLI 749
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+GR F M K+ L+P HY C+VDLLG GL DE + L++++ E VWGA
Sbjct: 750 QEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPT---EPDAQVWGA 806
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LLGAC++H+N+K+GEIA +++LEP N+ Y++L+++Y CGR DA+R + M ++G+
Sbjct: 807 LLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQCGRWIDARRTRSNMTDHGL 866
Query: 573 KKEPGCSWIQINDGGHVFLSG 593
KK PG SW+ + G + LSG
Sbjct: 867 KKNPGYSWVGAHKQG-LSLSG 886
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 153/618 (24%), Positives = 273/618 (44%), Gaps = 63/618 (10%)
Query: 10 QNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQ 69
Q++ + + D ++ Y K G LDNA +F++MP +D+ ++N +I+GL QS N
Sbjct: 151 QDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPC 210
Query: 70 GAKEVFDGMEVRDVVTWNSM----ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
A E+F M++ + V +S+ ++ V ++ + HG ++ V + +V +L+
Sbjct: 211 EALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCV-FGVVSNSLI 269
Query: 126 N----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK------- 174
+ C + LA F +M +D SW M+ G V G E +L D+M K
Sbjct: 270 DMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKI 329
Query: 175 --------------------------------DVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
D+ +++ Y G + A++ F +
Sbjct: 330 SVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSL 389
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI-------RNGLVK 255
RDL W ++ LV + A+S F++M K +I+S L+ + L K
Sbjct: 390 EGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGK 449
Query: 256 EAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
H Y+ K S+I+ T ++ Y A+ +F M +DV WN +I G +
Sbjct: 450 MMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCG 509
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
L+ F++++ SG PD+ T S+L+ C+ L L LG H IK V
Sbjct: 510 DPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKV 569
Query: 375 AMITMYARCGNIQSALLEFS-SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
A+I MYA+CG++ +A F + + D +SWN +I G ++G A +A+ F +M+L +
Sbjct: 570 ALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVR 629
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
P+ +TFV +L A SY ++ + + C+ F+ + ++D+ + G + +
Sbjct: 630 PNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNS-LIDMYAKSGQLSYSEK 688
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYL 552
+E+ G W A+L +H +V + E P +S Y+ +
Sbjct: 689 CFHEMENKG----TISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACR 744
Query: 553 SCGRREDAKRIFAQMKEN 570
G ++ + IF M E
Sbjct: 745 HAGLIQEGRNIFQSMTEK 762
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 119/526 (22%), Positives = 215/526 (40%), Gaps = 71/526 (13%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESYF 137
++ WNS+I Y L EA++ + M D ++ V+ A +
Sbjct: 91 SLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIH 150
Query: 138 KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+++ +R++ + GLV ++ KM G+LDN A
Sbjct: 151 QDIASRELECDVFIGTGLV---------DMYCKM-------------GHLDN-----ARK 183
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK--QMPETCEKTWNSI------ISVLI 249
+F KM +D+ SW +I+GL S A+ F+ QM E E SI +S L
Sbjct: 184 VFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLE 243
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
K H Y+ + + S ++I Y + GEV A ++F+ M +D W M+ G
Sbjct: 244 DVDSCKSIHGYVVRRCVFGVVS-NSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAG 302
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
+ E L+ +MK + + + + ++ L+ G+++H A+++
Sbjct: 303 YVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSD 362
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
V+ +++MYA+CG ++ A F S+ D++ W++ + L GY +AL +F+ M+
Sbjct: 363 IVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQH 422
Query: 430 TDFKPDDITFVGVLSACS-------------YAGLVDQG----------RYYFDCMKNKY 466
KPD ++SAC+ Y D G Y C Y
Sbjct: 423 EGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMY 482
Query: 467 FLQP-RSAHYTCVV---DLLGRFGLIDE---AMNLLNEIRADGIEVSPTVWGALLGACRI 519
+ HY VV L+ F + A+ + ++ G++ +LL AC +
Sbjct: 483 AMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACAL 542
Query: 520 HNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+++ +G G + + V + L +MY CG A+ +F
Sbjct: 543 LDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLF 588
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+T + +WN +I L +E +K + M G PD TFT VL C+ G
Sbjct: 87 ITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEG 146
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
IH + ++ MY + G++ +A F +P D+ SWN++I GL+
Sbjct: 147 VAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQS 206
Query: 415 GYAEKALELFERMRLTD-FKPDDITFVGVLSACSYAGLVDQGR 456
+ALE+F+RM++ + +PD ++ + + A S VD +
Sbjct: 207 SNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCK 249
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 41/229 (17%)
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
N ++ ++AR +Q L +S+ +I WNS+I + ++A++ ++ M +
Sbjct: 66 NPLLQIHARL-IVQQCTLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLE 124
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
PD TF VL AC+ A +G + ++ L+ T +VD+ + G +D A
Sbjct: 125 PDKYTFTFVLKACTGALDFHEGVAIHQDIASRE-LECDVFIGTGLVDMYCKMGHLDNARK 183
Query: 494 LLNEIRADGIEVSPTVWGALL-GACRIHNNIKVGEIAGERVME--LEPNNSGV------- 543
+ +++ + W A++ G + N + EI ME +EP++ +
Sbjct: 184 VFDKMPGKDV----ASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAV 239
Query: 544 --------------YLI-----------LTEMYLSCGRREDAKRIFAQM 567
Y++ L +MY CG + A +IF QM
Sbjct: 240 SRLEDVDSCKSIHGYVVRRCVFGVVSNSLIDMYSKCGEVKLAHQIFDQM 288
>gi|449461160|ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g18840-like [Cucumis
sativus]
Length = 1096
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 194/646 (30%), Positives = 317/646 (49%), Gaps = 63/646 (9%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N +I Y K+G L++A LF++MPER++F++N +IA ++S N++ A+ +FD +D+V
Sbjct: 450 NQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSHNLRQARALFDSAVCKDLV 509
Query: 85 TWNSMISGYV-CNGLIDEALRVFHGMPLKD---------------------VVSW----- 117
T+NSM+SGY +G +AL F M V+S+
Sbjct: 510 TYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITMLNLTAKLCVISYGKQLH 569
Query: 118 --------NLVIGALVNCQRMDLAESYFKEMG--------ARDVASWTIMVNGLVREGRI 161
+L + A + M +FKE D S MV REG I
Sbjct: 570 SFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSVSRNAMVAACCREGEI 629
Query: 162 VEARKLF-DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL----TSWKQLING 216
A LF ++ DV AWN MI+G++ NG + LF +M D + ++ +++
Sbjct: 630 DVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFVRMADEKVGWNEHTFASVLSA 689
Query: 217 LVNSRRIDAAISYFKQM--------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
N R + + P C + ++ V + ++ A S + N
Sbjct: 690 CSNLRSLKLGKEVHAYVLKNRLIANPFIC----SGLVDVYCKCNNMRYAKSVNSELRMQN 745
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ S T++IVGY G + A K+F+ + ++ VW + FG + E + + ++
Sbjct: 746 VYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTALFFGYVKLQQCEAVFELLSEYRK 805
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
PD S++ C+ L G+QIH+ ++ T ++++++ MY++CG+I
Sbjct: 806 EAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIY 865
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A F V D I +N +I G A+HG+ +A++LF+ M FKPD ITFV +LSAC +
Sbjct: 866 AERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFVALLSACRH 925
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
GLV+ G ++FD M N Y + P HY C++DL GR +D+A+ + +I I++
Sbjct: 926 GGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFMRKIP---IQLDAV 982
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+WGA L ACRI+ N ++ A + ++ +E N Y+ L +Y + G E+ RI +MK
Sbjct: 983 IWGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVYAAEGNWEEMGRIRKKMK 1042
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
VKK GCSW+ + HVF+SGD H K + L L E+
Sbjct: 1043 GKEVKKNAGCSWVFVESKFHVFISGDRFHSKNEAIYSTLASLTDEL 1088
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+T+ + ++ L G H Q IK +SN +IT YA+ G + A F +P
Sbjct: 414 YTAGRLVFHEMKHLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMP 473
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
++ SWN+II +A LF+ D + G + Y G
Sbjct: 474 ERNVFSWNAIIAAYVKSHNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQG 526
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 181/656 (27%), Positives = 318/656 (48%), Gaps = 59/656 (8%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------DMFT 54
N + +A +F MP+R+ V+WN MIR + NG + L QM E+ D+ T
Sbjct: 232 NGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVAT 291
Query: 55 YNTVIAGLMQSDNVQGAKEVFDGMEV-----RDVVTWNSMISGYVCNGLIDEALRVFHGM 109
TV+ + D G + G+ + ++VV N+++ Y G I++A +F
Sbjct: 292 LATVLP-VCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLN 350
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEM--GARDVASWTIMV---------NGLVRE 158
K+VVSWN ++G + ++M G D+ + + + ++
Sbjct: 351 NNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPN 410
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
+ + L + + N +A Y G + A +F + + + SW LI G
Sbjct: 411 LKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYS 470
Query: 219 NSRRIDAAISYFKQMPET---------CE-----------KTWNSIISVLIRNGLVKEAH 258
S ++ + QM + C K + ++IRN L +++
Sbjct: 471 QSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSF 530
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
Y+ +++ Y GE+ +A +F+ M + + WN M+ G +N E
Sbjct: 531 VYI------------SLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPER 578
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L F QM G P + SV CS LP+L LGR+ H A+K ++ ++I
Sbjct: 579 ALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVID 638
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MYA+ G++ + F+ + + SWN+++ G HG A++A++LFE M+ T PD++T
Sbjct: 639 MYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELT 698
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
F+GVL+AC+++GLV +G Y D MK + + P HY CV+D+L R G +DEA+ + E
Sbjct: 699 FLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEE 758
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
++ E +W LL +CRIH N+++GE ++ EP Y++L+ +Y G+ +
Sbjct: 759 MSE--EPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWD 816
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
+ +++ +MKE ++K+ GCSWI++N F++G+SS F ++ L ++L EI
Sbjct: 817 EVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREI 872
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/559 (25%), Positives = 261/559 (46%), Gaps = 57/559 (10%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVIAGL 62
+++++FD + +++ WN +I Y +N N + +F +M D FT+ V+
Sbjct: 135 DSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKAC 194
Query: 63 MQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
VQ V G+ V+ DV N+++S Y NG + +ALRVF MP +++VSW
Sbjct: 195 AGVSEVQVGLAV-HGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSW 253
Query: 118 NLVIGALVNCQRMDLAESYFKEMG-----------ARDVASWTIMVNGLVREGRIVEARK 166
N +I + L+E F +G DVA+ ++ R+ I +
Sbjct: 254 NSMIRVFSD---NGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKG 310
Query: 167 LFD---KMPA-KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ K+ K+V N ++ Y GC+ A+ +F+ +++++ SW ++ G +
Sbjct: 311 VHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGD 370
Query: 223 IDAAISYFKQM------PETCEKTWNSIISVLIRNGL---VKEAHSY--LEKYPYSNIAS 271
I +QM E T + + V + +KE H Y +++ ++N
Sbjct: 371 IHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELV 430
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
+ Y + G + A +VF + ++ V WN +I G ++ L + QMK SG
Sbjct: 431 ANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGL 490
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAI--KIARNQFTTVSNAMITMYARCGNIQSA 389
PD T S+L+ CS + +L LG+++H I ++ R+ F +S ++++Y CG + +A
Sbjct: 491 LPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYIS--LLSLYIHCGELSTA 548
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
+ F ++ ++SWN+++ G +G+ E+AL LF +M L +P +I+ + V ACS
Sbjct: 549 HVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLL 608
Query: 450 GLVDQGR----YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
+ GR Y C+ L+ + V+D+ + G + E+ + N ++ E
Sbjct: 609 PSLRLGREAHGYALKCL-----LEDNAFIACSVIDMYAKNGSVMESFKVFNGLK----ER 659
Query: 506 SPTVWGALLGACRIHNNIK 524
S W A++ IH K
Sbjct: 660 SVASWNAMVMGYGIHGRAK 678
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGP 331
T VI Y G + VF+ + +++ WN +I N+L L+ FV+M ESG
Sbjct: 121 TRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGL 180
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
PDN TF V+ C+ + + +G +H +K + VSNA+++ Y G++ AL
Sbjct: 181 LPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALR 240
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD----FKPDDITFVGVLSACS 447
F +P +++SWNS+I + +G +E+ L +M D F PD T VL C+
Sbjct: 241 VFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCA 300
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 18/186 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+N + E+ +F+ + +R +WN M+ GY +G A+ LF +M D T+
Sbjct: 642 KNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLG 701
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
V+ S V D M + + N + Y C G +DEAL++
Sbjct: 702 VLTACNHSGLVHEGLTYLDQM--KTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEM 759
Query: 111 LKD--VVSWNLVIGALVNCQRMDLAESYFKEMGARD---VASWTIMVNGLVREGRIVEAR 165
++ V WN ++ + + +++ E ++ + ++ ++ N G+ E R
Sbjct: 760 SEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVR 819
Query: 166 KLFDKM 171
K+ +M
Sbjct: 820 KVRQRM 825
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 246/430 (57%), Gaps = 15/430 (3%)
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVLIRN 251
+F +M +RD+ SW L+ G R A+ + ++M P++ T ++++ +
Sbjct: 126 VFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDS--FTLSTVLPIFAEC 183
Query: 252 GLVK---EAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
VK E H + + + S++ +++I Y ++KVF+ + RD +WN ++
Sbjct: 184 ADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLL 243
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
G +N EE L F +M ++G P TF+S++ +C +L +L G+Q+HA I
Sbjct: 244 AGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFE 303
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
+S+++I MY +CG I A F + D++SW ++I G A HG A +AL LFERM
Sbjct: 304 DNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERM 363
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
L + KP+ ITF+ VL+ACS+AGLVD+G YF M N Y + P H+ + D LGR G
Sbjct: 364 ELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGE 423
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLIL 547
+DEA N +++++ I+ + +VW LL ACR+H N + E +++MELEP + G +++L
Sbjct: 424 LDEAYNFISKMQ---IKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVL 480
Query: 548 TEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
+ MY + GR +A + M++ G+KK+P CSWI++ HVF++ D SHP + R+ L
Sbjct: 481 SNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDAL 540
Query: 608 NLLHTEIERE 617
N ++ RE
Sbjct: 541 NAFSEQMARE 550
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 128/272 (47%), Gaps = 23/272 (8%)
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
S KVF+ M RDV WN ++ G E E L F +M G PD+ T ++VL I +
Sbjct: 122 SVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFA 181
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
+ + G ++H A + + V +++I MYA C ++ F ++P+ D I WNS
Sbjct: 182 ECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNS 241
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY---YFDC-- 461
++ G A +G E+AL +F RM +P +TF ++ C + G+ Y C
Sbjct: 242 LLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGG 301
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV--WGALLGACRI 519
++ F+ + ++D+ + G I A + +++ SP V W A++ +
Sbjct: 302 FEDNVFIS------SSLIDMYCKCGEISIAHCIFDKMS------SPDVVSWTAMIMGYAL 349
Query: 520 HNNIKVGEIAGERVMEL---EPNNSGVYLILT 548
H + + ER MEL +PN+ +LT
Sbjct: 350 HGPAREALVLFER-MELGNAKPNHITFLAVLT 380
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 59/328 (17%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGL 62
+ + +FD+M +RD V+WN ++ G + G A+ +M D FT +TV+
Sbjct: 121 ESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIF 180
Query: 63 MQSDNVQGAKE-----------------------------------VFDGMEVRDVVTWN 87
+ +V+ E VFD + VRD + WN
Sbjct: 181 AECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWN 240
Query: 88 SMISGYVCNGLIDEALRVFHGM------PLKDVVSWNL-VIGALVNCQRMDLAESYFKEM 140
S+++G NG ++EAL +F M P+ S + V G L + + +Y
Sbjct: 241 SLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICG 300
Query: 141 GARD-VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
G D V + +++ + G I A +FDKM + DV +W MI GY +G A LF
Sbjct: 301 GFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLF 360
Query: 200 QKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMP------ETCEKTWNSIISVLI 249
++M + ++ ++ ++ +D YFK M T E + ++ L
Sbjct: 361 ERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEH-FAALADTLG 419
Query: 250 RNGLVKEAHSYLEKYPYSNIAS-WTNVI 276
R G + EA++++ K AS W+ ++
Sbjct: 420 RAGELDEAYNFISKMQIKPTASVWSTLL 447
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 186/461 (40%), Gaps = 62/461 (13%)
Query: 30 GYFKNGFLDNAMC-LFNQMPERDMFTYNTVIAGLMQSDNV-QGAKEVFDGMEVRDVVTWN 87
G F + F NA+ L+ ++P + + I + S + ++VFD M RDVV+WN
Sbjct: 80 GAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWN 139
Query: 88 SMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNC----QRMDLAESYFKE 139
+++ G G EAL M + D + + V+ C + +++ F+
Sbjct: 140 TLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRN 199
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
DV + +++ R + K+FD +P +D WN ++AG NG V A +F
Sbjct: 200 GFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIF 259
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP--------ETCEKTWNSIISVLIRN 251
++M + + L+ A++ + KQ+ E +S+I + +
Sbjct: 260 RRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKC 319
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
G + AH +K ++ SWT +I+GY G A+ +FE M
Sbjct: 320 GEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERM---------------- 363
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+LG P++ TF +VLT CS +D G + K N +
Sbjct: 364 --ELGNA-------------KPNHITFLAVLTACSHAGLVDKGWKY----FKSMSNHYGI 404
Query: 372 VSN-----AMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELFE 425
V A+ R G + A S + I S W++++ H A E+ +
Sbjct: 405 VPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAK 464
Query: 426 RMRLTDFKPDDITFVGVLSAC-SYAGLVDQGRYYFDCMKNK 465
++ + +P I VLS S +G ++ + + M+ K
Sbjct: 465 --KIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKK 503
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 49/247 (19%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------P---------- 48
R + +FD +P RD + WN ++ G +NG ++ A+ +F +M P
Sbjct: 220 RTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIP 279
Query: 49 -----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVT 85
E ++F +++I + + A +FD M DVV+
Sbjct: 280 VCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVS 339
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEMG 141
W +MI GY +G EAL +F M L + +++ V+ A + +D YFK M
Sbjct: 340 WTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMS 399
Query: 142 -----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA-WNLMIAGYLDNGCVGVA 195
+ + + + L R G + EA KM K + W+ ++ + +A
Sbjct: 400 NHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLA 459
Query: 196 EDLFQKM 202
E++ +K+
Sbjct: 460 EEVAKKI 466
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 117/307 (38%), Gaps = 52/307 (16%)
Query: 318 EGLKFFVQMKESGP--SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
+ + F++M+ S S A+ + L C+ L LG +HA AI+ +NA
Sbjct: 31 DAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANA 90
Query: 376 MITMYAR--CGNIQSALLEFSSVP-----------------IHDIISWNSIICGLAYHGY 416
++ +Y + C + S + VP D++SWN+++ G A G
Sbjct: 91 LLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGR 150
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG--------------------- 455
+AL +M F+PD T VL + V +G
Sbjct: 151 HHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSS 210
Query: 456 --RYYFDCMKNKYFLQ-----PRSAH--YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
Y +C + Y ++ P H + ++ + G ++EA+ + + G+
Sbjct: 211 LIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPV 270
Query: 507 PTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
P + +L+ C +++ G ++ + +N + L +MY CG A IF
Sbjct: 271 PVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFD 330
Query: 566 QMKENGV 572
+M V
Sbjct: 331 KMSSPDV 337
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/607 (29%), Positives = 295/607 (48%), Gaps = 72/607 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I A+ + D+ P +WN +IR Y +G N++ L+ +M N ++++
Sbjct: 43 IDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKA 102
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISG-YVCNGLIDEALRVFHGMPLKDVVSWNLVIGAL 124
+ G+ V +G ++ V S +VCN LID + F
Sbjct: 103 CSTLGS--VLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCF------------------ 142
Query: 125 VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
R+ AR +D M +D +WN +I+
Sbjct: 143 -----------------------------------RLDSARNFWDDMGFRDEVSWNSIIS 167
Query: 185 GYLDNGCVGVAEDLFQKMH-DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS 243
GY+ G V A DLF++M R++ W +ING +S F+QM + ++ +
Sbjct: 168 GYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPN 227
Query: 244 IISVLIRNGLVKEAHSY-----------LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
+++ +Y + K P + I T +I Y + G+V A ++F
Sbjct: 228 AATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILV-TALIDMYSKCGDVEKAWRIF 286
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ ++ +++ WN +I G + L EE + + MK P+ T +VL+ C+ L L+
Sbjct: 287 DGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALE 346
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
LGR++H + + ++ A++ MYA+CG I A L F D+ WN++I GLA
Sbjct: 347 LGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLA 406
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
YHG +L +F +M +P+D+TF+GVLSAC+++GLV++GR F M +K+ L P+
Sbjct: 407 YHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKL 466
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
HY C+VDLLGR G + EA L+ + I +WGALL ACRIH N+++ + E
Sbjct: 467 EHYACMVDLLGRAGHLKEAYELVQNML---IPPDSIIWGALLSACRIHRNLELADKISET 523
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLS 592
+M + N G ++L+ +Y S GR +D R+ Q+KE +KK GCSW++++ H F+
Sbjct: 524 IMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVV 583
Query: 593 GDSSHPK 599
D++H K
Sbjct: 584 EDTTHLK 590
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 196/456 (42%), Gaps = 75/456 (16%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
R+ A+N +D M RD V+WN +I GY + G ++ A LF +MP R
Sbjct: 143 RLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMR-------------- 188
Query: 65 SDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-DVVSWN--LVI 121
R+VV W +MI+GY G E L +F M + D V N ++
Sbjct: 189 ----------------RNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMV 232
Query: 122 GALVNCQRM---DLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAK 174
L C + ++ + + TI+V L+ + G + +A ++FD + K
Sbjct: 233 CLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCK 292
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
++ +WN +I G + G + A DL++ M + S K LVN A + +
Sbjct: 293 NLPSWNAIITGCVQGGLLEEAIDLYRHMKAQ---SVKPNEITLVNVLSACAGLGALE--- 346
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFE 293
L +E H YL + N+ T ++ Y + G++ A +F
Sbjct: 347 ------------------LGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFV 388
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
+ +DV +WN MI GL + G + L F QM +G P++ TF VL+ C+ ++
Sbjct: 389 KTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEE 448
Query: 354 GR-QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICG 410
GR Q + A K + M+ + R G+++ A L++ +P II W +++
Sbjct: 449 GRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSII-WGALLSA 507
Query: 411 LAYHGYAEKALELFERMRLTDFKPDD--ITFVGVLS 444
H + LEL +++ T D I F +LS
Sbjct: 508 CRIH----RNLELADKISETIMASQDPNIGFCILLS 539
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 188/644 (29%), Positives = 321/644 (49%), Gaps = 38/644 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------DMFTYNT 57
+ +A LFD MP+R+ V+WN MIR + NGF + + L +M E D+ T T
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 58 VIAGLMQSDNVQGAKEVFDGMEV-----RDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V+ + + K V G V +++V N+++ Y G I A +F K
Sbjct: 298 VLPVCAREREIGLGKGV-HGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEM--GARDVASWTIMVNGLV----REGRIVEARK 166
+VVSWN ++G ++M G DV + + + V E + ++
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 416
Query: 167 L----FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
L + + N +A Y G + A+ +F + + + SW LI G S
Sbjct: 417 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 476
Query: 223 IDAAISYFKQM------PET---CEKTWNSIISVLIRNGLVKEAHSY-LEKYPYSNIASW 272
++ QM P++ C + S S L L KE H + + + ++ +
Sbjct: 477 PRLSLDAHLQMKISGLLPDSFTVC--SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 534
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+V+ Y GE+ + +F+ M + + WN +I G +N + L F QM G
Sbjct: 535 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 594
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
+ V CS LP+L LGR+ HA A+K ++ ++I MYA+ G+I +
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F+ + SWN++I G HG A++A++LFE M+ T PDD+TF+GVL+AC+++GL+
Sbjct: 655 FNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLI 714
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
+G Y D MK+ + L+P HY CV+D+LGR G +D+A+ ++ E ++ +V +W +
Sbjct: 715 HEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG--IWKS 772
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
LL +CRIH N+++GE ++ ELEP Y++L+ +Y G+ ED +++ +M E +
Sbjct: 773 LLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSL 832
Query: 573 KKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+K+ GCSWI++N F+ G+ F ++ L ++L +I +
Sbjct: 833 RKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISK 876
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/554 (23%), Positives = 254/554 (45%), Gaps = 56/554 (10%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVIAGL 62
+++ +FD + ++ WN +I Y +N D + F +M D FTY VI
Sbjct: 138 DSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC 197
Query: 63 MQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+V G G+ V+ DV N+++S Y +G + +AL++F MP +++VSW
Sbjct: 198 AGMSDV-GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSW 256
Query: 118 NLVIGALVNCQRMDLAESYFKEMGAR-----------DVASWTIMVNGLVRE-----GRI 161
N +I + +E F +G DVA+ ++ RE G+
Sbjct: 257 NSMIRVFSD---NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG 313
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
V + ++ K++ N ++ Y GC+ A+ +F+ +++++ SW ++ G
Sbjct: 314 VHGWAVKLRLD-KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372
Query: 222 RIDAAISYFKQMPETCEKTWNSIISVLIRNGL-----------VKEAHSY--LEKYPYSN 268
+QM E +++L N + +KE H Y +++ Y+
Sbjct: 373 DTHGTFDVLRQMLAGGEDVKADEVTIL--NAVPVCFHESFLPSLKELHCYSLKQEFVYNE 430
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ + + Y + G + A +VF + ++ V WN +I G +++ L +QMK
Sbjct: 431 LVA-NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 489
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMITMYARCGNI 386
SG PD+ T S+L+ CS L +L LG+++H I+ + R+ F +S ++++Y CG +
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLS--VLSLYIHCGEL 547
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
+ F ++ ++SWN++I G +G+ ++AL +F +M L + I+ + V AC
Sbjct: 548 CTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 607
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
S + GR K+ L+ + ++D+ + G I ++ + N ++ E S
Sbjct: 608 SLLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK----EKS 662
Query: 507 PTVWGALLGACRIH 520
W A++ IH
Sbjct: 663 TASWNAMIMGYGIH 676
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 128/564 (22%), Positives = 230/564 (40%), Gaps = 90/564 (15%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP-----LKDVVSWNLVIGALV 125
++ VFD + +++ WN++IS Y N L DE L F M L D ++ VI A
Sbjct: 139 SRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACA 198
Query: 126 NCQRMDLAESY----FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
+ + + K DV +V+ G + +A +LFD MP +++ +WN
Sbjct: 199 GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNS 258
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
MI + DNG +E+ F L+ G + D A MP+ T
Sbjct: 259 MIRVFSDNG---FSEESF-------------LLLGEMMEENGDGAF-----MPDVA--TL 295
Query: 242 NSIISVLIRN---GLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTT 297
+++ V R GL K H + K N ++ Y + G + +A +F++
Sbjct: 296 VTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNN 355
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP--SPDNATFTSVLTIC---SDLPTLD 352
++V WN M+ G QM G D T + + +C S LP+L
Sbjct: 356 KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL- 414
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
+++H ++K V+NA + YA+CG++ A F + + SWN++I G A
Sbjct: 415 --KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHA 472
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACS------------------------- 447
+L+ +M+++ PD T +LSACS
Sbjct: 473 QSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLF 532
Query: 448 ----------YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
+ G + + FD M++K + + V+ + G D A+ + +
Sbjct: 533 VYLSVLSLYIHCGELCTVQALFDAMEDKSLVS-----WNTVITGYLQNGFPDRALGVFRQ 587
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME-LEPNNSGVYLILTEMYLSCGR 556
+ GI++ + GAC + ++++G A ++ L +++ + L +MY G
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 647
Query: 557 REDAKRIFAQMKENGVKKEPGCSW 580
+ ++F NG+K++ SW
Sbjct: 648 ITQSSKVF-----NGLKEKSTASW 666
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 5/180 (2%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGP 331
T +I Y G + VF+ + ++++ WN +I N+L +E L+ F++M +
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
PD+ T+ V+ C+ + + +G +H +K + V NA+++ Y G + AL
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD----FKPDDITFVGVLSACS 447
F +P +++SWNS+I + +G++E++ L M + F PD T V VL C+
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 351 LDLGRQIHAQAIKIARNQFTTV-SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
+++GR+IH R + V +ITMYA CG+ + F ++ ++ WN++I
Sbjct: 100 IEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVIS 159
Query: 410 GLAYHGYAEKALELF-ERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+ + ++ LE F E + TD PD T+ V+ AC AG+ D G
Sbjct: 160 SYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGMSDVG 204
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 18/186 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+N I ++ +F+ + ++ T +WN MI GY +G A+ LF +M D T+
Sbjct: 644 KNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLG 703
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVF--HG 108
V+ S + D M+ + N + Y C G +D+ALRV
Sbjct: 704 VLTACNHSGLIHEGLRYLDQMKSSFGLKPN--LKHYACVIDMLGRAGQLDKALRVVAEEM 761
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAE---SYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
DV W ++ + Q +++ E + E+ ++ ++ N G+ + R
Sbjct: 762 SEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVR 821
Query: 166 KLFDKM 171
K+ +M
Sbjct: 822 KVRQRM 827
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 192/680 (28%), Positives = 324/680 (47%), Gaps = 66/680 (9%)
Query: 1 MRNARIQEAQNLFDKMPQRDTV-TWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNT 57
+ + R+ +A+ LFD+MP R+ + N M+ GY ++G L A LF P RD T+
Sbjct: 45 ISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTV 104
Query: 58 VIA------GLMQSDNVQGAKEVFDGMEVRDVVTWNSMI-----SGYVCNGLIDEALRVF 106
+I G SD V +++ D VT +++ SG +I +L F
Sbjct: 105 MIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPF 164
Query: 107 H---GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVE 163
G+ +VV N ++ A + A F+EM RD ++ M+ G +EG E
Sbjct: 165 ALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAE 224
Query: 164 ARKLFDKMPAKDVQAW--------------------------------------NLMIAG 185
A LF M K + A N ++
Sbjct: 225 ALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATSSNVFVNNSLLDF 284
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTW 241
Y C+ + LF +M +RD S+ +I G +R + F++M +
Sbjct: 285 YSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPY 344
Query: 242 NSIISV---LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTT 297
S++SV + G+ K+ H+ L S+ N ++ Y + G + +A F
Sbjct: 345 ASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKND 404
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
+ W MI G +N EE L+ F M+ +G SPD ATF+S + S+L + LGRQ+
Sbjct: 405 KTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQL 464
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H+ I+ +A++ MY +CG + AL F +P + ISWN++I A++G A
Sbjct: 465 HSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQA 524
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
+ A+++FE M FKPD +TF+ VLSACS+ GL ++ YF+ M+ +Y + P HY+C
Sbjct: 525 KNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSC 584
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
V+D LGR G D+ +L E+ E P +W ++L +CR H N + +A E++ +
Sbjct: 585 VIDTLGRVGRFDKVQEMLGEM---PFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMG 641
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
++ Y+IL+ ++ G+ EDA + M++ G++KE G SW+++ + F S D ++
Sbjct: 642 STDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTN 701
Query: 598 PKFHRLRYLLNLLHTEIERE 617
P ++ L L+ E++++
Sbjct: 702 PMITEIKDELERLYKEMDKQ 721
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 181/399 (45%), Gaps = 51/399 (12%)
Query: 150 IMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGVAEDLF--QKMHDRD 206
++++ L+ GR+ +AR LFD+MP + + + N M++GY +G + A LF H RD
Sbjct: 39 LLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRD 98
Query: 207 LTSWKQLINGLVNS--RRIDAAISYFKQM------PETCEKTWNSIISVLIRNG------ 252
+W +I ++ R A+S F+ M P+ T +++++ +G
Sbjct: 99 AVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPD--RVTVATVLNLPPASGGTAAAI 156
Query: 253 LVKEAHSYLEKYP--YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
++ H + K +SN+ ++ Y + G + +A +VF+ M RD +N M+ G
Sbjct: 157 IIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGC 216
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+ E L F M+ G + TF++VLT+ + + L LGRQ+H + A +
Sbjct: 217 SKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVAR-ATSSNV 275
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
V+N+++ Y++C + F + D +S+N +I G A++ A L LF M+
Sbjct: 276 FVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSL 335
Query: 431 DFKPDDITFVGVLSACS-----------YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
F + + +LS +A LV G D + N ++
Sbjct: 336 SFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGN------------ALI 383
Query: 480 DLLGRFGLIDEA-MNLLNEIRADGIEVSPTVWGALLGAC 517
D+ + G++D A N +N+ G+ W A++ C
Sbjct: 384 DMYSKCGMLDAAKTNFINKNDKTGVS-----WTAMITGC 417
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/446 (37%), Positives = 252/446 (56%), Gaps = 16/446 (3%)
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETCEKT 240
+I Y G +G A +F +M DRDL SW +I+G AI F +M E E
Sbjct: 169 LITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPD 228
Query: 241 WNSIISVLIRNG------LVKEAHSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE 293
+++SVL G L + + LEK N + +I Y + G++ SA +VF+
Sbjct: 229 EMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFD 288
Query: 294 LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDL 353
M +DV WN +I G +N E + F M+E+GP PD T VL+ CS + LDL
Sbjct: 289 SMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDL 348
Query: 354 GRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAY 413
G+ + A + V++A+I MYA+CG++ A+ F S+P + +SWN++I LA+
Sbjct: 349 GKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAF 408
Query: 414 HGYAEKALELFERMRLTD--FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
HG A++AL LF RM + +P+DITF+GVLSAC +AGLVD+GR F+ M + L P+
Sbjct: 409 HGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPK 468
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
HY+C+VDL R GL+ EA +L+ ++ E+ V G+LLGAC+ N VGE +
Sbjct: 469 VEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEI---VLGSLLGACQRRRNADVGERVIQ 525
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
+E+E +NSG Y+I +++Y + R +D+ ++ M++ GV K PGCSWI I H F
Sbjct: 526 LFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAHVHEFH 585
Query: 592 SGDSSHPKFHRLRYLLNLLHTEIERE 617
+GDS H + LLN E++RE
Sbjct: 586 AGDSLHNHSMNIYQLLN---EEMKRE 608
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 155/298 (52%), Gaps = 10/298 (3%)
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
++I Y GE+G A KVF+ M RD+ WN MI G + +E + F++M+E G P
Sbjct: 168 SLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEP 227
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D T SVL C DL L LGR + ++ + + +A+I MY +CG++ SA F
Sbjct: 228 DEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVF 287
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
S+P D+++WN+II G A +G + +A+ LF MR PD +T + VLSACS G +D
Sbjct: 288 DSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALD 347
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
G+ + + ++ LQ + ++D+ + G +D+A+ + + EVS W A+
Sbjct: 348 LGK-WVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKN-EVS---WNAM 402
Query: 514 LGACRIHNNIKVGEIAGERVME----LEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ A H + R+ + ++PN+ +L+ + G ++ +++F M
Sbjct: 403 ISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSAC-VHAGLVDEGRQLFESM 459
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 165/379 (43%), Gaps = 55/379 (14%)
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHS--YLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
K+ +T + S+I L+K+ H+ + P N ++ ++ ++ A
Sbjct: 26 KEHHQTLTEKLLSLIKQCKSKNLLKQIHAQMLINSIPKPNF-----LLSKIIDLKDLAYA 80
Query: 289 IKVFELMTTRDVTVWNVMIFGLGEN-DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
VF +T ++ +NVM+ GL + ++ + ++K G +N T+ + C +
Sbjct: 81 SLVFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGN 140
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
+ L G+ H K + V++++ITMYARCG + A F + D++SWNS+
Sbjct: 141 VRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSM 200
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC--------------------- 446
I G + G+ ++A+ LF MR F+PD++T V VL AC
Sbjct: 201 ISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKM 260
Query: 447 ---SYAG--LVD---------QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
SY G L+D R FD M NK + + ++ + G +EA+
Sbjct: 261 EVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVT-----WNAIITGYAQNGASNEAI 315
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE----IAGERVMELEPNNSGVYLILT 548
L N +R G +L AC + +G+ A E+ ++ ++ V L
Sbjct: 316 VLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQ---HDVYVASALI 372
Query: 549 EMYLSCGRREDAKRIFAQM 567
+MY CG +DA R+F M
Sbjct: 373 DMYAKCGSLDDAVRVFESM 391
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 62/317 (19%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGL-- 62
A+ +FD+M RD V+WN MI GY K GF A+ LF +M E D T +V+
Sbjct: 182 ARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGD 241
Query: 63 ------------------MQSDNVQG---------------AKEVFDGMEVRDVVTWNSM 89
M+ ++ G A+ VFD M +DVVTWN++
Sbjct: 242 LGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAI 301
Query: 90 ISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLA---ESYFKEMGA 142
I+GY NG +EA+ +F+GM P D V+ V+ A +DL E++ E G
Sbjct: 302 ITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGL 361
Query: 143 R-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+ DV + +++ + G + +A ++F+ MP K+ +WN MI+ +G A LF++
Sbjct: 362 QHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRR 421
Query: 202 MHDRDLT------SWKQLINGLVNSRRIDAAISYFKQM-------PETCEKTWNSIISVL 248
M + T ++ +++ V++ +D F+ M P+ + ++ ++ +
Sbjct: 422 MSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKV--EHYSCMVDLC 479
Query: 249 IRNGLVKEAHSYLEKYP 265
R GL+ EA ++K P
Sbjct: 480 ARAGLLYEAWDLIKKMP 496
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 154/373 (41%), Gaps = 58/373 (15%)
Query: 42 CL-FNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLID 100
CL F + D + +++I + + A++VFD M RD+V+WNSMISGY G
Sbjct: 152 CLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTK 211
Query: 101 EALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLA---ESYFKEMGARDVASW--TIM 151
EA+ +F M + D ++ V+GA + + L E + E +V S+ + +
Sbjct: 212 EAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEK-KMEVNSYMGSAL 270
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH------DR 205
++ + G ++ AR++FD MP KDV WN +I GY NG A LF M DR
Sbjct: 271 IDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDR 330
Query: 206 ----------------DLTSWKQ-----------------LINGLVNSRRIDAAISYFKQ 232
DL W + LI+ +D A+ F+
Sbjct: 331 VTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFES 390
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTN------VIVGYFEMGEVG 286
MP E +WN++IS L +G +EA S + N N V+ G V
Sbjct: 391 MPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVD 450
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF--FVQMKESGPSPDNATFTSVLTI 344
++FE M V V + + GL + + +K+ PD S+L
Sbjct: 451 EGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGA 510
Query: 345 CSDLPTLDLGRQI 357
C D+G ++
Sbjct: 511 CQRRRNADVGERV 523
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------ERDMFTYNTVI 59
+ +A +F+ MP ++ V+WN MI +G A+ LF +M + + T+ V+
Sbjct: 381 LDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVL 440
Query: 60 AGLMQSDNVQGAKEVFDGME-----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
+ + + V +++F+ M V V ++ M+ GL+ EA + MP K
Sbjct: 441 SACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPD 500
Query: 115 VSWNLVIGALVN-CQR 129
+V+G+L+ CQR
Sbjct: 501 ---EIVLGSLLGACQR 513
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 173/473 (36%), Positives = 261/473 (55%), Gaps = 21/473 (4%)
Query: 156 VREGRIVEARKLFDKMP-AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLI 214
VREG V + + KM A DV N ++ Y + A +F RDL SW +I
Sbjct: 141 VREGEEVHGQAI--KMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMI 198
Query: 215 NGLVNSRRIDAAISYFKQM-PETCEKTWNSIISVL---IRNG---LVKEAHSYLEKYPYS 267
G V + F +M E + +++ VL R G L ++ H Y+ +
Sbjct: 199 QGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNV 258
Query: 268 NIASWT-NVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
N+ + N +V Y + G+ A KVF+ M ++V WN MI GL + +E L F +
Sbjct: 259 NLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRK 318
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT---VSNAMITMYAR 382
M+ G PD+ T +VL C++L L+LG+ +HA + RNQ + NA++ MYA+
Sbjct: 319 MQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAY---LDRNQIRADGFIGNALVDMYAK 375
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CG+I A F ++ D+ S+ ++I GLA HG KAL+LF M +PD++TFVGV
Sbjct: 376 CGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGV 435
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
L+ACS+ GLV++GR YF+ M Y L+P+ HY C+VDLLGR GLI+EA IR
Sbjct: 436 LTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEF---IRNMP 492
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
IE V GALLGAC+IH +++GE +++ ++EP G Y++++ +Y S R DA +
Sbjct: 493 IEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALK 552
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+ MKE ++K PGCS I+++ H F GD SHPK + LL+ + + ++
Sbjct: 553 LRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLK 605
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 171/399 (42%), Gaps = 40/399 (10%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D++ NT++ D ++ A++VFD RD+V+W +MI GYV G E + +F M
Sbjct: 159 DVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMC 218
Query: 111 LKDVVS--WNLVIGALVNCQRM-------DLAESYFKEMGAR-DVASWTIMVNGLVREGR 160
+++ + LVI L +C R+ L + DV +V+ ++ G
Sbjct: 219 GENLQADGMTLVI-VLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGD 277
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
ARK+F +MP K+V +WN MI+G G + +F+KM + + ++NS
Sbjct: 278 ANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNS 337
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
C + VL L K H+YL++ N +V +
Sbjct: 338 ----------------CAN-----LGVL---ELGKWVHAYLDRNQIRADGFIGNALVDMY 373
Query: 281 -EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G + A VF+ M +DV + MI GL + G + L F +M + G PD TF
Sbjct: 374 AKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFV 433
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKI--ARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
VLT CS + ++ GR+ I R Q M+ + R G I A ++P
Sbjct: 434 GVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHY-GCMVDLLGRAGLINEAEEFIRNMP 492
Query: 398 IH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
I D +++ HG E + +++ + + D
Sbjct: 493 IEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKD 531
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 91/170 (53%), Gaps = 1/170 (0%)
Query: 288 AIKVFELMTTRDVTVWNVMIFGLG-ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A+ + + T ++ ++N +I GL N+ EGL + QM G PDN T VL C+
Sbjct: 77 ALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACA 136
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
+ + G ++H QAIK+ VSN ++ MYA C I+SA F + P D++SW +
Sbjct: 137 ESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTT 196
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+I G G+A + + LF M + + D +T V VLS+C+ G + GR
Sbjct: 197 MIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGR 246
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 159/388 (40%), Gaps = 69/388 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------------- 50
I+ A+ +FD PQRD V+W MI+GY K GF + LF +M
Sbjct: 176 IRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSS 235
Query: 51 -------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVT 85
D+F N ++ ++ + A++VF M V++VV+
Sbjct: 236 CARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVS 295
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
WNSMISG G E+L +F M D V+ V+ + N ++L + +
Sbjct: 296 WNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLD 355
Query: 142 ARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+ + + N LV + G I +A +F M KDV ++ MI G +G G A D
Sbjct: 356 RNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALD 415
Query: 198 LFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQM-------PETCEKTWNSIIS 246
LF +M + D ++ ++ + ++ YF+ M P+ + + ++
Sbjct: 416 LFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQL--EHYGCMVD 473
Query: 247 VLIRNGLVKEAHSYLEKYPYSNIASWTNVIV------GYFEMGEVGSAIKVFELMTTRDV 300
+L R GL+ EA ++ P A ++ G E+GE S +K E + R
Sbjct: 474 LLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGE--SVMKKIEKIEPRKD 531
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ +M + + LK MKE
Sbjct: 532 GAYVLMSNIYSSANRWRDALKLRKTMKE 559
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 191/661 (28%), Positives = 299/661 (45%), Gaps = 122/661 (18%)
Query: 43 LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNG 97
+F++MPER+ ++ T+I G QS+ A E+F +G E+ N + V
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHEL------NPFVFTTVLKL 55
Query: 98 LID----EALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVN 153
L+ E R+ HG LK N IG T +++
Sbjct: 56 LVSMEWAELGRIVHGCVLKVGYGSNTFIG--------------------------TALID 89
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM----------- 202
G + AR++FD++ +KD+ +W MIA Y +N C A + F +M
Sbjct: 90 AYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFT 149
Query: 203 ----------------------------HDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
++RDL L+ D A F MP
Sbjct: 150 FAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMP 209
Query: 235 ETCEKTWNSIISVLIRNG--------------------------------------LVKE 256
+ W+ +IS ++G L K
Sbjct: 210 KNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKT 269
Query: 257 AHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
H + K S +N ++ Y + G + ++++FE ++ R+ WN +I +
Sbjct: 270 IHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGD 329
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
GE L F M T++S+L C+ L L+LG Q+H K Q V NA
Sbjct: 330 GERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNA 389
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
+I MYA+CG+I+ A F + + D +SWN+IICG + HG +A+++F M+ T KPD
Sbjct: 390 LIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPD 449
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
++TFVGVLSACS G +D+G+ YF MK Y ++P HYTC+V L+GR G +D+A+ +
Sbjct: 450 ELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFI 509
Query: 496 NEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
+I E S +W ALLGAC IHN++++G I+ +RV+ELEP + +++L+ +Y
Sbjct: 510 EDI---PFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARAR 566
Query: 556 RREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
R + + MK GVKKEPG SWI+ H F D+SH + +L L+ +
Sbjct: 567 RWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTR 626
Query: 616 R 616
+
Sbjct: 627 K 627
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 195/461 (42%), Gaps = 36/461 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
+ A+ +FD++ +D V+W MI Y +N A+ F+QM + + FT+ V+
Sbjct: 97 VSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKA 156
Query: 62 LMQSDNVQGAK----EVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ N K V RD+ ++ Y G D+A R F MP DV+ W
Sbjct: 157 CLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPW 216
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP----- 172
+ +I + + A F +M V + +++ +E+ L +
Sbjct: 217 SFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALK 276
Query: 173 ---AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+ DV N ++A Y GC+ + +LF+ + DR+ SW +I V + A+S
Sbjct: 277 AGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSL 336
Query: 230 FKQM----PETCEKTWNSII---SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFE 281
F M + E T++SI+ + L L + H K Y + N ++ Y +
Sbjct: 337 FSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAK 396
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
G + A +F+++ RD WN +I G + LG E +K F MKE+ PD TF V
Sbjct: 397 CGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGV 456
Query: 342 LTICSDLPTLDLGRQIHAQ-----AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
L+ CS+ LD G+Q I+ +T M+ + R GN+ A+ +
Sbjct: 457 LSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYT----CMVWLMGRSGNLDQAVKFIEDI 512
Query: 397 PIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
P ++ W +++ H E L R+ + +P D
Sbjct: 513 PFEPSVMIWRALLGACVIHNDVE--LGRISAQRVLELEPRD 551
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 118/270 (43%), Gaps = 54/270 (20%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE---------------- 49
I+++ LF+ + R+ V+WN +I Y + G + A+ LF+ M
Sbjct: 299 IEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRA 358
Query: 50 -----------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
+D+ N +I + +++ A+ +FD +++RD V+W
Sbjct: 359 CATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSW 418
Query: 87 NSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
N++I GY +GL EA+++F+ M D +++ V+ A N R+D + YF M
Sbjct: 419 NAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSM-K 477
Query: 143 RD------VASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGVA 195
+D + +T MV + R G + +A K + +P + V W ++ + + V +
Sbjct: 478 QDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELG 537
Query: 196 EDLFQK---MHDRDLTSWKQLINGLVNSRR 222
Q+ + RD S L N +RR
Sbjct: 538 RISAQRVLELEPRDEASHVLLSNIYARARR 567
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 185/637 (29%), Positives = 324/637 (50%), Gaps = 38/637 (5%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ--- 64
EA +F+ + + V +++M++GY KN L +A+C F +M ++ A L+Q
Sbjct: 97 EAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCG 156
Query: 65 -SDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
+ +++ +E+ +G E ++ +++S Y ID A ++F M KD+VSW
Sbjct: 157 ENLDLKKGREIHGLIITNGFE-SNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWT 215
Query: 119 -LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGL--------VREGRIVEA---RK 166
LV G N + + A +V+ L +R GR + R
Sbjct: 216 TLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRS 275
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
F+ + V N ++ Y G +A +F+ M + + SW +I+G + + A
Sbjct: 276 GFESL----VNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEA 331
Query: 227 ISYFKQMPETCE-KTWNSIISVLIRNGLVKE------AHSYLEKYPY-SNIASWTNVIVG 278
+ F +M + E T +++ VL+ + + H L+K SN++ ++I
Sbjct: 332 FATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISM 391
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + V A +F + +VT WN MI G +N +E L F M+ G D T
Sbjct: 392 YSKCKRVDIAASIFNNLEKTNVT-WNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTL 450
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
V+T +D + IH A++ + VS A++ MYA+CG I++A F +
Sbjct: 451 VGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQE 510
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
+I+WN++I G HG ++ L+LF M+ KP+DITF+ V+SACS++G V++G
Sbjct: 511 RHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLL 570
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F M+ Y+L+P HY+ +VDLLGR G +D+A N + E+ I+ +V GA+LGAC+
Sbjct: 571 FKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMP---IKPGISVLGAMLGACK 627
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
IH N+++GE A +++ +L+P+ G +++L +Y S + ++ M++ G+ K PGC
Sbjct: 628 IHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGC 687
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
SW+++ + H F SG ++HP+ ++ L L EI+
Sbjct: 688 SWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIK 724
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 203/482 (42%), Gaps = 77/482 (15%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--------------- 49
+I A +F++M +D V+W ++ GY +NG A+ L QM E
Sbjct: 195 QIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILP 254
Query: 50 -----------RDMFTY-------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVT 85
R + Y N ++ + + + A+ VF GM + VV+
Sbjct: 255 AVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVS 314
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLK-DVVSWNLVIGALVNCQRM-DLAESYF--KEMG 141
WN+MI G NG +EA F M + +V + ++G L+ C + DL +F K +
Sbjct: 315 WNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLD 374
Query: 142 ARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+ S ++N L+ + R+ A +F+ + +V WN MI GY NGCV A +
Sbjct: 375 KLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCVKEALN 433
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
LF M + + ++ + I+ + W I + +R +
Sbjct: 434 LFCMMQSQGIK---------LDCFTLVGVITALADFSVNRQAKW--IHGLAVRACM---- 478
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+N+ T ++ Y + G + +A K+F++M R V WN MI G G + +G+
Sbjct: 479 --------DNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGK 530
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAM 376
E L F +M++ P++ TF SV++ CS ++ G + + + T +AM
Sbjct: 531 ETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAM 590
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER--MRLTDFKP 434
+ + R G + A +PI IS + G K +EL E+ +L P
Sbjct: 591 VDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGAC---KIHKNVELGEKAAQKLFKLDP 647
Query: 435 DD 436
D+
Sbjct: 648 DE 649
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 159/369 (43%), Gaps = 45/369 (12%)
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
T +K I+ +I+NG E H + T VI + + G A +VFE +
Sbjct: 58 TSKKELYQILPFIIKNGFYNE-HLF-----------QTKVISLFCKFGSNSEAARVFEHV 105
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+ ++++M+ G +N + L FF++M + +L +C + L GR
Sbjct: 106 ELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGR 165
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+IH I V A++++YA+C I +A F + D++SW +++ G A +G
Sbjct: 166 EIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNG 225
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR------------------- 456
+A++AL+L +M+ KPD +T V +L A + + GR
Sbjct: 226 HAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTN 285
Query: 457 ----YYFDCMKNK----YFLQPRS---AHYTCVVDLLGRFGLIDEAMNLLNEIRADG-IE 504
YF C + F RS + ++D + G +EA ++ +G +
Sbjct: 286 ALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVP 345
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGRREDAKRI 563
T+ G LL AC +++ G + + +L+ +N V L MY C R + A I
Sbjct: 346 TRVTMMGVLL-ACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASI 404
Query: 564 FAQMKENGV 572
F +++ V
Sbjct: 405 FNNLEKTNV 413
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 186/628 (29%), Positives = 323/628 (51%), Gaps = 41/628 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTV-IA 60
R+ ++ A+ +F M RD V++N +I G + GF D A+ LF +M +RD + + +A
Sbjct: 308 RSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKM-QRDCLKPDCITVA 366
Query: 61 GLMQSDNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMP 110
L+ + GA + GM++ D++ S++ Y ++ A + F
Sbjct: 367 SLLSACASVGA--LHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTE 424
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+++V WN+++ A + + F++M + ++R + A L ++
Sbjct: 425 TENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQ 484
Query: 171 MPAK--------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ +V +++I Y G + +A + +++ + D+ SW +I G V
Sbjct: 485 IHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDM 544
Query: 223 IDAAISYFKQMPETCEKTWN----SIISVL-----IRNGLVKEAHSYLEKYPYSNIASWT 273
A+ F++M + N S IS +R G A SY + ++++
Sbjct: 545 FSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFG-ADLSINN 603
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
+I Y G + A FE + ++ WN ++ GL ++ EE L+ FV+M +
Sbjct: 604 ALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEV 663
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+ T+ S ++ + L + G+QIH+ +K + VSN++I++YA+ G+I A EF
Sbjct: 664 NMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREF 723
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ + ++ISWN++I G + HG +AL LFE M++ P+ +TFVGVLSACS+ GLV
Sbjct: 724 NDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVK 783
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+G YF+ M + L P+S HY CVVDLLGR G +D AM + E+ I +W L
Sbjct: 784 EGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEM---PIPADAMIWRTL 840
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR---REDAKRIFAQMKEN 570
L AC IH NI++GE A ++ELEP +S Y++++ +Y + R+ ++++ MK+
Sbjct: 841 LSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKL---MKDR 897
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHP 598
GVKKEPG SWI++ + H F +GD HP
Sbjct: 898 GVKKEPGRSWIEVKNAVHAFYAGDKLHP 925
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 161/635 (25%), Positives = 270/635 (42%), Gaps = 72/635 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R+ A +FD+ R +WN MI + CLF +M + AG
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAG 164
Query: 62 LMQSDNVQG-----------AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
++++ V G ++ + G + +V N +I Y NG I+ A +VF+ +
Sbjct: 165 VLKA-CVGGDIAFNYVKQVHSRTFYYGFDSSPLVA-NLLIDLYSKNGYIESAKKVFNCIC 222
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+KD+V+W +I L + A F +M A ++ +++ ++ ++ +L ++
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGV---------AEDLFQKMHDRDLTSWKQLINGLVNSR 221
+ ++ W Y+ NG V + AE +F M+ RD S+ LI+GLV
Sbjct: 283 LHCLVIK-WGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG 341
Query: 222 RIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEA---HSYLEKYPYS-NIASWT 273
D A+ F +M C K T S++S G + + HS+ K S +I
Sbjct: 342 FSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEG 401
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
+++ Y + +V +A K F T ++ +WNVM+ G+ D + + F QM+ G P
Sbjct: 402 SLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIP 461
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+ T+ S+L C+ L L LG QIH IK V + +I MYA+ G + AL
Sbjct: 462 NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRIL 521
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+P D++SW ++I G H +AL+LFE M + D+I F +SAC+ +
Sbjct: 522 RRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALR 581
Query: 454 QGR-----------------------YYFDC--MKNKYFL-----QPRSAHYTCVVDLLG 483
QG+ Y C ++ Y + + +V L
Sbjct: 582 QGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLA 641
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM------ELE 537
+ G +EA+ + + EV+ +G+ + A NIK G+ V+ E E
Sbjct: 642 QSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSERE 701
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+NS L +Y G DA R F M E V
Sbjct: 702 VSNS-----LISLYAKSGSISDAWREFNDMSERNV 731
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 215/483 (44%), Gaps = 45/483 (9%)
Query: 135 SYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN---- 189
++ +E G R + ++ ++ G + G + E +L ++ L+I +DN
Sbjct: 47 NFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRH 106
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETCEKTWNSIISVL 248
G A +F + +R + SW ++I+ V + F++M E + VL
Sbjct: 107 GDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVL 166
Query: 249 -------IRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDV 300
I VK+ HS Y + + N+++ Y + G + SA KVF + +D+
Sbjct: 167 KACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDI 226
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W MI GL +N L EE + F M S P +SVL+ + + +LG Q+H
Sbjct: 227 VTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL 286
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
IK + T V N ++ +Y+R + SA FS++ D +S+NS+I GL G++++A
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-----------------------Y 457
LELF +M+ KPD IT +LSAC+ G + +G
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDL 406
Query: 458 YFDC----MKNKYFLQPRSAHYTCVVDLLGRFGLID---EAMNLLNEIRADGIEVSPTVW 510
Y C +K+FL + + +L +G +D ++ + +++ +G+ + +
Sbjct: 407 YSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTY 466
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
++L C + +GE V++ N V +L +MY G+ A RI ++ E
Sbjct: 467 PSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPE 526
Query: 570 NGV 572
+ V
Sbjct: 527 DDV 529
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/517 (32%), Positives = 275/517 (53%), Gaps = 26/517 (5%)
Query: 103 LRVFHGMPLK-DVVSWNLVIGALVN-CQRM---DLAESYFKEMGARDVASWTIMVNGLVR 157
LR HG + +V S + V+ ++ C + D A S F+ ++ + ++ GL
Sbjct: 58 LRQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAE 117
Query: 158 EGRIVEARKLFDKM------PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
R + F M P + + L A L NG VG A + S+
Sbjct: 118 NSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFV 177
Query: 212 Q--LINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLEKYP 265
+ L++ V + +A+ F + PE+ + WN +I R G + +A + P
Sbjct: 178 RVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMP 237
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
+ SW ++I G+ +MG++G A ++F M ++V W M+ G +N E+ L+ F
Sbjct: 238 KKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFC 297
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT---TVSNAMITMYAR 382
M E G P++ T S L+ C+ + LD G +IH ++ N F + A++ MYA+
Sbjct: 298 MLEEGARPNDYTIVSALSACAKIGALDAGLRIHNY---LSGNGFKLNLVIGTALVDMYAK 354
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CGNI+ A F ++ W+ +I G A HG+ KAL+ FE M+ T KPD + F+ V
Sbjct: 355 CGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAV 414
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
L+ACS++G V++G +FD M+ Y ++P HYT VVD+LGR G +DEA+ IRA
Sbjct: 415 LNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKF---IRAMP 471
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
I VWGAL ACR H N+++ E+A +++++LEP + G Y+ L+ Y S GR +DA+R
Sbjct: 472 ITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAER 531
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
+ M+++G K+PG S+I+++ H F++GD++H +
Sbjct: 532 VRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNR 568
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 139/282 (49%), Gaps = 23/282 (8%)
Query: 6 IQEAQNLFDKMPQR----DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ A +FD+ P+ + WNV+I GY + G L A LF+ MP++D ++N++I G
Sbjct: 191 LGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLING 250
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN--L 119
M+ ++ AKE+F M ++VV+W +M++G+ NG ++AL F M L++ N
Sbjct: 251 FMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCM-LEEGARPNDYT 309
Query: 120 VIGALVNCQRMDLAES------YFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMP 172
++ AL C ++ ++ Y G + ++ T +V+ + G I A K+F +
Sbjct: 310 IVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETK 369
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAIS 228
K + W++MI G+ +G A F+ M D + ++N +S +++ +
Sbjct: 370 EKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLK 429
Query: 229 YFKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
+F M E K + ++ +L R G + EA ++ P
Sbjct: 430 FFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMP 471
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 121/254 (47%), Gaps = 21/254 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R + +A LFD MP++DT +WN +I G+ K G + A LF +MPE+++ ++ T++ G
Sbjct: 222 RMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNG 281
Query: 62 LMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
Q+ + + A E F +G D T S +S G +D LR+ H +
Sbjct: 282 FSQNGDPEKALETFFCMLEEGARPND-YTIVSALSACAKIGALDAGLRI-HNYLSGNGFK 339
Query: 117 WNLVIG-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
NLVIG ALV+ C ++ AE F E + + W++M+ G G +A + F+ M
Sbjct: 340 LNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWM 399
Query: 172 PAKDVQAWNLMIAGYLD----NGCVGVAEDLFQKMH-----DRDLTSWKQLINGLVNSRR 222
+ +++ L+ +G V F M + + + +++ L + R
Sbjct: 400 KFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGR 459
Query: 223 IDAAISYFKQMPET 236
+D A+ + + MP T
Sbjct: 460 LDEALKFIRAMPIT 473
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 49/251 (19%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER---------- 50
M+ + A+ LF KMP+++ V+W M+ G+ +NG + A+ F M E
Sbjct: 252 MKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIV 311
Query: 51 ------------------------DMFTYNTVIAGLM-----QSDNVQGAKEVFDGMEVR 81
+ F N VI + + N++ A++VF + +
Sbjct: 312 SALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEK 371
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAESYF 137
++ W+ MI G+ +G +AL+ F M D V + V+ A + +++ +F
Sbjct: 372 GLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFF 431
Query: 138 KEMG-----ARDVASWTIMVNGLVREGRIVEARKLFDKMP-AKDVQAWNLMIAGYLDNGC 191
M + +T++V+ L R GR+ EA K MP D W + +
Sbjct: 432 DNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKN 491
Query: 192 VGVAEDLFQKM 202
V +AE +K+
Sbjct: 492 VEMAELASKKL 502
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 187/643 (29%), Positives = 322/643 (50%), Gaps = 36/643 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------DMFTYNT 57
+ +A LFD MP+R+ V+WN MIR + NGF + + L +M E D+ T T
Sbjct: 593 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 652
Query: 58 VIAGLMQSDNVQGAKEVFD-GMEVR---DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
V+ + + K V +++R ++V N+++ Y G I A +F K+
Sbjct: 653 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 712
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM--GARDVASWTIMVNGLV----REGRIVEARKL 167
VVSWN ++G ++M G DV + + + V E + ++L
Sbjct: 713 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 772
Query: 168 ----FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
+ + N +A Y G + A+ +F + + + SW LI G S
Sbjct: 773 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 832
Query: 224 DAAISYFKQM------PET---CEKTWNSIISVLIRNGLVKEAHSY-LEKYPYSNIASWT 273
++ QM P++ C + S S L L KE H + + + ++ +
Sbjct: 833 RLSLDAHLQMKISGLLPDSFTVC--SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 890
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
+V+ Y GE+ + +F+ M + + WN +I G +N + L F QM G
Sbjct: 891 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 950
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+ V CS LP+L LGR+ HA A+K ++ ++I MYA+ G+I + F
Sbjct: 951 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 1010
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ + SWN++I G HG A++A++LFE M+ T PDD+TF+GVL+AC+++GL+
Sbjct: 1011 NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIH 1070
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+G Y D MK+ + L+P HY CV+D+LGR G +D+A+ ++ E ++ +V +W +L
Sbjct: 1071 EGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG--IWKSL 1128
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
L +CRIH N+++GE ++ ELEP Y++L+ +Y G+ ED +++ +M E ++
Sbjct: 1129 LSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLR 1188
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
K+ GCSWI++N F+ G+ F ++ L ++L +I +
Sbjct: 1189 KDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISK 1231
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/555 (24%), Positives = 256/555 (46%), Gaps = 50/555 (9%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVIAGL 62
+++ +FD + ++ WN +I Y +N D + F +M D FTY VI
Sbjct: 493 DSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC 552
Query: 63 MQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+V G G+ V+ DV N+++S Y +G + +AL++F MP +++VSW
Sbjct: 553 AGMSDV-GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSW 611
Query: 118 NLVIGALVNCQRMDLAESYFKEM------GA--RDVASWTIMVNGLVRE-----GRIVEA 164
N +I + + + EM GA DVA+ ++ RE G+ V
Sbjct: 612 NSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHG 671
Query: 165 RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
+ ++ K++ N ++ Y GC+ A+ +F+ +++++ SW ++ G
Sbjct: 672 WAVKLRLD-KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 730
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGL-----------VKEAHSY--LEKYPYSNIAS 271
+QM E +++L N + +KE H Y +++ Y+ + +
Sbjct: 731 GTFDVLRQMLAGGEDVKADEVTIL--NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVA 788
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
+ Y + G + A +VF + ++ V WN +I G +++ L +QMK SG
Sbjct: 789 -NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 847
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMITMYARCGNIQSA 389
PD+ T S+L+ CS L +L LG+++H I+ + R+ F +S ++++Y CG + +
Sbjct: 848 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLS--VLSLYIHCGELCTV 905
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F ++ ++SWN++I G +G+ ++AL +F +M L + I+ + V ACS
Sbjct: 906 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL 965
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
+ GR K+ L+ + ++D+ + G I ++ + N ++ E S
Sbjct: 966 PSLRLGREAH-AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK----EKSTAS 1020
Query: 510 WGALLGACRIHNNIK 524
W A++ IH K
Sbjct: 1021 WNAMIMGYGIHGLAK 1035
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 128/561 (22%), Positives = 228/561 (40%), Gaps = 90/561 (16%)
Query: 74 VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP-----LKDVVSWNLVIGALVNCQ 128
VFD + +++ WN++IS Y N L DE L F M L D ++ VI A
Sbjct: 497 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 556
Query: 129 RMDLAESY----FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIA 184
+ + + K DV +V+ G + +A +LFD MP +++ +WN MI
Sbjct: 557 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 616
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI 244
+ DNG +E+ F L+ G + D A MP+ T ++
Sbjct: 617 VFSDNG---FSEESF-------------LLLGEMMEENGDGAF-----MPDVA--TLVTV 653
Query: 245 ISVLIRN---GLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDV 300
+ V R GL K H + K N ++ Y + G + +A +F++ ++V
Sbjct: 654 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 713
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGP--SPDNATFTSVLTIC---SDLPTLDLGR 355
WN M+ G QM G D T + + +C S LP+L +
Sbjct: 714 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL---K 770
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
++H ++K V+NA + YA+CG++ A F + + SWN++I G A
Sbjct: 771 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 830
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACS---------------------------- 447
+L+ +M+++ PD T +LSACS
Sbjct: 831 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 890
Query: 448 -------YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
+ G + + FD M++K + + V+ + G D A+ + ++
Sbjct: 891 SVLSLYIHCGELCTVQALFDAMEDKSLVS-----WNTVITGYLQNGFPDRALGVFRQMVL 945
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME-LEPNNSGVYLILTEMYLSCGRRED 559
GI++ + GAC + ++++G A ++ L +++ + L +MY G
Sbjct: 946 YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQ 1005
Query: 560 AKRIFAQMKENGVKKEPGCSW 580
+ ++F NG+K++ SW
Sbjct: 1006 SSKVF-----NGLKEKSTASW 1021
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 5/180 (2%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGP 331
T +I Y G + VF+ + ++++ WN +I N+L +E L+ F++M +
Sbjct: 479 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 538
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
PD+ T+ V+ C+ + + +G +H +K + V NA+++ Y G + AL
Sbjct: 539 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 598
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD----FKPDDITFVGVLSACS 447
F +P +++SWNS+I + +G++E++ L M + F PD T V VL C+
Sbjct: 599 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 658
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 351 LDLGRQIHAQAIKIARNQFTTV-SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
+++GR+IH R + V +ITMYA CG+ + F ++ ++ WN++I
Sbjct: 455 IEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVIS 514
Query: 410 GLAYHGYAEKALELF-ERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+ + ++ LE F E + TD PD T+ V+ AC AG+ D G
Sbjct: 515 SYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGMSDVG 559
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 18/186 (9%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
+N I ++ +F+ + ++ T +WN MI GY +G A+ LF +M D T+
Sbjct: 999 KNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLG 1058
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVF--HG 108
V+ S + D M+ + N + Y C G +D+ALRV
Sbjct: 1059 VLTACNHSGLIHEGLRYLDQMKSSFGLKPN--LKHYACVIDMLGRAGQLDKALRVVAEEM 1116
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAE---SYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
DV W ++ + Q +++ E + E+ ++ ++ N G+ + R
Sbjct: 1117 SEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVR 1176
Query: 166 KLFDKM 171
K+ +M
Sbjct: 1177 KVRQRM 1182
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 252/445 (56%), Gaps = 19/445 (4%)
Query: 185 GYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCE 238
G L++ +F +M +RD SW LI G +R A+S ++M P+T
Sbjct: 430 GGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTF- 488
Query: 239 KTWNSIISVL-----IRNGLVKEAHSYLEKYPYSN-IASWTNVIVGYFEMGEVGSAIKVF 292
T ++++ + I+ G+V H Y K + N + +++I Y ++ ++KVF
Sbjct: 489 -TLSTVLPIFAECADIKRGMV--VHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVF 545
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ + D +WN M+ G +N EE L F +M ++G P TF+S++ +L L
Sbjct: 546 DSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLR 605
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
LG+Q+HA I+ N +S+++I MY +CGN+ A F+ + DI+SW ++I G A
Sbjct: 606 LGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYA 665
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
HG +A LFERM L + KP+ ITF+ VL+ACS+AGLVD G YF+ M N+Y P
Sbjct: 666 LHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSL 725
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
H + D LGR G +DEA N ++E++ I+ + +VW LL ACR+H N + E ++
Sbjct: 726 EHCAALADTLGRAGDLDEAYNFISEMK---IKPTSSVWSTLLRACRVHKNTVLAEEVAKK 782
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLS 592
+ ELEP + G ++IL+ MY + GR +A ++ M+ G+KKEP CSWI++ + HVF++
Sbjct: 783 IFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIA 842
Query: 593 GDSSHPKFHRLRYLLNLLHTEIERE 617
D SHP + R+ LN+ ++ R+
Sbjct: 843 HDKSHPWYDRIIDALNVYSEQMIRQ 867
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 116/498 (23%), Positives = 203/498 (40%), Gaps = 85/498 (17%)
Query: 30 GYFKNGFLDNAMC-LFNQMP--ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
G F + F NA+ L ++P T G ++S + ++VFD M RD V+W
Sbjct: 396 GSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSW 455
Query: 87 NSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNC---QRMDLAESYFKE 139
N++I G + EAL + M + D + + V+ C +R + Y +
Sbjct: 456 NTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIK 515
Query: 140 MG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
G DV + +++ ++ + K+FD D WN M+AGY NG V A +
Sbjct: 516 NGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGI 575
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV-----LIRNGL 253
F++M + A + + +P T++S+I L+R G
Sbjct: 576 FRRM--------------------LQAGV---RPVP----VTFSSLIPAFGNLSLLRLG- 607
Query: 254 VKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
K+ H+YL + ++ NI +++I Y + G V A +VF + + D+ W MI G
Sbjct: 608 -KQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYAL 666
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
+ E F +M+ P++ TF +VLT CS HA + F ++
Sbjct: 667 HGPTTEAFVLFERMELGNVKPNHITFLAVLTACS-----------HAGLVDNGWKYFNSM 715
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
SN ++ VP + + + G A G ++A M++
Sbjct: 716 SN-----------------QYGFVPSLEHCAALADTLGRA--GDLDEAYNFISEMKI--- 753
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF-LQPRS-AHYTCVVDLLGRFGLIDE 490
KP + +L AC V + + + K F L+P+S + + ++ G +E
Sbjct: 754 KPTSSVWSTLLRACR----VHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNE 809
Query: 491 AMNLLNEIRADGIEVSPT 508
A L +R G++ P
Sbjct: 810 AAQLRKSMRIKGMKKEPA 827
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 144/337 (42%), Gaps = 65/337 (19%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNV----------------MIRGYFKNGFLDNAMCLF 44
+ +A + + +FD+M +RD V+WN M+R +++GF+ + L
Sbjct: 432 LESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLS 491
Query: 45 NQMP--------ERDMFTYNTVIAGLMQSDNVQGAK---------------EVFDGMEVR 81
+P +R M + I +D G+ +VFD
Sbjct: 492 TVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDC 551
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYF 137
D V WNSM++GY NG ++EAL +F M V V+++ +I A N + L +
Sbjct: 552 DAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLH 611
Query: 138 KEM-GAR---DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ AR ++ + +++ + G + AR++F+ + + D+ +W MI GY +G
Sbjct: 612 AYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTT 671
Query: 194 VAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMP---------ETCEKT 240
A LF++M + ++ ++ ++ +D YF M E C
Sbjct: 672 EAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCA-- 729
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYSNIAS-WTNVI 276
++ L R G + EA++++ + +S W+ ++
Sbjct: 730 --ALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLL 764
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 125/318 (39%), Gaps = 58/318 (18%)
Query: 319 GLKFFVQMKES-GP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
+ F+QM+ S P S A+ + L C+ L L +HA AI+ +NA+
Sbjct: 348 AISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANAL 407
Query: 377 ITMYARC---------------GNIQSALLE-----FSSVPIHDIISWNSIICGLAYHGY 416
+ + + G ++SA E F + D +SWN++I G A H
Sbjct: 408 LNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKR 467
Query: 417 AEKALELFERMRLTDFKPDDITFVGVL---SACS--YAGLVDQG---------------- 455
++AL + M F PD T VL + C+ G+V G
Sbjct: 468 HQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSS 527
Query: 456 --RYYFDCMKNKYFLQPRSAHYTCVVDL-------LGRFGLIDEAMNLLNEIRADGIEVS 506
Y +C + Y ++ + C L + G ++EA+ + + G+
Sbjct: 528 LIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPV 587
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFA 565
P + +L+ A + +++G+ ++ N N + L +MY CG + A+R+F
Sbjct: 588 PVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVF- 646
Query: 566 QMKENGVKKEPGCSWIQI 583
NG++ SW +
Sbjct: 647 ----NGIQSPDIVSWTAM 660
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 188/624 (30%), Positives = 314/624 (50%), Gaps = 74/624 (11%)
Query: 32 FKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF--DGMEVRDVVTWNSM 89
K+GFLD R+ F +N +++ + V A+ +F G V D+VTWN+M
Sbjct: 181 LKHGFLDKG---------RERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTM 231
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG-ALVNCQRMDL----AESYFKEMGARD 144
IS V G +EA++V + M V + AL C R++L E + + D
Sbjct: 232 ISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDD 291
Query: 145 VASWTIMVNGLV----REGRIVEARKLFDKMP--AKDVQAWNLMIAGYLDNGCVGVAE-- 196
+A+ + + + LV ++ AR++FD +P + + WN MI GY +G G+ E
Sbjct: 292 LAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHG--GMDEEA 349
Query: 197 -DLFQKMHDR--------------------DLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
+LF +M ++ + K+ ++G V R D A + F Q
Sbjct: 350 IELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKR--DMASNRFVQ--- 404
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK-VFEL 294
N+++ + R G + EAH+ +I SW +I G G + A + V E+
Sbjct: 405 ------NALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREM 458
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
M+ G +D +G + P+N T ++L C+ L G
Sbjct: 459 QLPSSAASGETMLEG---DDTSVDGQRCM---------PNNITLMTLLPGCAVLAAPARG 506
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
++IH A++ A V +A++ MYA+CG + A F +P ++I+WN +I H
Sbjct: 507 KEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMH 566
Query: 415 GYAEKALELFERMRLT-DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSA 473
G ++AL LF+RM + P+++TF+ L+ACS++GLVD+G F MK Y +P
Sbjct: 567 GLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPY 626
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV 533
+ CVVD+LGR G +DEA +++ + +VS W +LGACR+H N+K+G IA ER+
Sbjct: 627 LHACVVDVLGRAGRLDEAYGIISSMAPGEHQVS--AWSTMLGACRLHRNVKLGRIAAERL 684
Query: 534 MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSG 593
ELEP+ + Y++L +Y + G E++ + M++ GV KEPGCSWI+++ H F++G
Sbjct: 685 FELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAG 744
Query: 594 DSSHPKFHRLRYLLNLLHTEIERE 617
+S+HP+ ++ ++ L + RE
Sbjct: 745 ESAHPESAQVHAHMDALWERMRRE 768
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 210/467 (44%), Gaps = 62/467 (13%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMP--LKDVVSWNLVIGALVNCQRMDLAESYFKEMGA-R 143
N++++ Y G +D AL +F P L+D VS+N +I AL +R A ++M A
Sbjct: 89 NALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADH 148
Query: 144 DVASWTIMVNGLV---------REGRIVEARKL----FDKMPAKDVQAWNLMIAGYLDNG 190
+V+S+T++ L R GR A L DK ++ +N +++ Y G
Sbjct: 149 EVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDK--GRERFPFNALLSMYARLG 206
Query: 191 CVGVAEDLF--QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSI 244
V A+ LF DL +W +I+ LV R + A+ M + T+ S
Sbjct: 207 LVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASA 266
Query: 245 ISVLIR---NGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM----GEVGSAIKVFELMTT 297
+ R G+ +E H+++ K ++A+ + V +M +V A +VF+++
Sbjct: 267 LPACSRLELLGVGREVHAFVLK--DDDLAANSFVASALVDMYASNEQVSHARRVFDMVPE 324
Query: 298 --RDVTVWNVMIFGLGEN-DLGEEGLKFFVQMK-ESGPSPDNATFTSVLTICSDLPTLDL 353
R + +WN MI G ++ + EE ++ F +M+ E+G +P T VL C+
Sbjct: 325 HGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTG 384
Query: 354 GRQIHAQAIK--IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
+H +K +A N+F V NA++ MYAR G + A F+ + + DI+SWN++I G
Sbjct: 385 KEAVHGYVVKRDMASNRF--VQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGC 442
Query: 412 AYHGYAEKALELFERMRLTDFK--------------------PDDITFVGVLSACSYAGL 451
G +A +L M+L P++IT + +L C+
Sbjct: 443 IVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAA 502
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
+G+ ++ L+ A + +VD+ + G + A + + +
Sbjct: 503 PARGKEIHG-YAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRL 548
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 146/357 (40%), Gaps = 83/357 (23%)
Query: 3 NARIQEAQNLFDKMPQ--RDTVTWNVMIRGYFKNGFLD-NAMCLFNQM-PERDMFTYNTV 58
N ++ A+ +FD +P+ R WN MI GY ++G +D A+ LF++M E T
Sbjct: 309 NEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETT 368
Query: 59 IAGLMQS----------DNVQG-----------------------------AKEVFDGME 79
+AG++ + + V G A +F ++
Sbjct: 369 MAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMID 428
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW--------------------NL 119
+RD+V+WN++I+G + GLI EA ++ M L + N+
Sbjct: 429 LRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNI 488
Query: 120 VIGALVNCQRMDLAESYFKEMGA--------RDVASWTIMVNGLVREGRIVEARKLFDKM 171
+ L+ + A + KE+ D+A + +V+ + G + AR +FD++
Sbjct: 489 TLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRL 548
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM-----HDRDLTSWKQLINGLVNSRRIDAA 226
P ++V WN++I Y +G A LF +M + ++ + +S +D
Sbjct: 549 PRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRG 608
Query: 227 ISYFKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS--NIASWTNVI 276
+ F+ M E ++ VL R G + EA+ + +++W+ ++
Sbjct: 609 LELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTML 665
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 44/260 (16%)
Query: 355 RQIHAQAIKIA--RNQFTTVSNAMITMYARCGNIQSALLEFSSVP--IHDIISWNSIICG 410
R IH +++ A VSNA++T YARCG++ +AL F++ P + D +S+NS+I
Sbjct: 68 RAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISA 127
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY------------------AGLV 452
L AL+ M L D + T V VL ACS+ G +
Sbjct: 128 LCLFRRWGHALDALRDM-LADHEVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFL 186
Query: 453 DQG--RYYFDCMKNKY------------FLQPRSA-----HYTCVVDLLGRFGLIDEAMN 493
D+G R+ F+ + + Y F + + ++ LL + G +EA+
Sbjct: 187 DKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQ 246
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE--PNNSGVYLILTEMY 551
+L ++ A G+ + + L AC + VG V++ + NS V L +MY
Sbjct: 247 VLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMY 306
Query: 552 LSCGRREDAKRIFAQMKENG 571
S + A+R+F + E+G
Sbjct: 307 ASNEQVSHARRVFDMVPEHG 326
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 43/178 (24%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ +FD++P+R+ +TWNV+I Y +G D A+ LF++M
Sbjct: 541 ARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRM--------------------- 579
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-------PLKDVVSWNLVI 121
V +G + VT+ + ++ +GL+D L +F GM P + + V+
Sbjct: 580 -----VANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHA--CVV 632
Query: 122 GALVNCQRMDLAESYFKEM--GARDVASWTIMVNGL-----VREGRIVEARKLFDKMP 172
L R+D A M G V++W+ M+ V+ GRI A +LF+ P
Sbjct: 633 DVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIA-AERLFELEP 689
>gi|297833250|ref|XP_002884507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330347|gb|EFH60766.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 676
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 165/537 (30%), Positives = 289/537 (53%), Gaps = 28/537 (5%)
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM-- 140
+V WNS++S YV G + +AL++F MP++DV+S N+V + + + K M
Sbjct: 90 LVVWNSLLSLYVKCGKLGDALKLFDEMPVRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 141 -GARDVASWTIMVN-----GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
G D A+ TI+++ +++ A + K++ N +I Y GC
Sbjct: 150 SGGFDQATLTIVLSVCDTPEFCLVTKMIHALAILSGYD-KEISVGNKLITSYFKCGCSVS 208
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVL 248
+F +M R++ +W +I+GL+ + + + F M P + T+ S ++
Sbjct: 209 GRWVFSEMAHRNVITWTAVISGLIENELHEDGLRLFCLMRRGLVHPNSV--TYLSALAAC 266
Query: 249 IRNGLVKEA---HSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
+ ++ E H+ L K+ S + + ++ Y + G + A K+FE D
Sbjct: 267 SGSQMIVEGQQIHALLWKFGIESELCIESALMDMYSKCGSIEDAWKIFESSQEVDEVSMT 326
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
V++ GL +N EE ++FF++M ++G D +++L + +L LG+Q+H+ IK
Sbjct: 327 VILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAILGVSFVDNSLGLGKQLHSLVIKR 386
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
T V+N +I MY++CG++ + F +P + +SWNS+I A HG+ AL+L+
Sbjct: 387 KFCGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLY 446
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
E M + KP D+TF+ +L ACS+ GL+D+GR + MK + ++PR+ HYTC++D+LGR
Sbjct: 447 EEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIKPRTEHYTCIIDMLGR 506
Query: 485 FGLIDEAMNLLNEIRADGIEVSP--TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
GL+ EA + + D + + P +W ALLGAC H + +VGE A E++ E P++S
Sbjct: 507 AGLMKEAKSFI-----DSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFETAPDSSA 561
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
++++ +Y S G+ ++ + +MKE GV KE G SWI++ H F+ D HP+
Sbjct: 562 AHILMANIYSSRGKWKERAKTIKRMKEMGVTKETGISWIEMEKKTHSFVVEDKMHPQ 618
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 195/470 (41%), Gaps = 61/470 (12%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ ++ +A LFD+MP RD ++ N++ G+ +N ++ L +M F T+
Sbjct: 101 VKCGKLGDALKLFDEMPVRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDQATLTI 160
Query: 61 GLMQSDNVQ--------GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
L D + A + G + +++ N +I+ Y G VF M +
Sbjct: 161 VLSVCDTPEFCLVTKMIHALAILSGYD-KEISVGNKLITSYFKCGCSVSGRWVFSEMAHR 219
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGR------------ 160
+V++W VI L+ E+ E G R + +M GLV
Sbjct: 220 NVITWTAVISGLI--------ENELHEDGLR---LFCLMRRGLVHPNSVTYLSALAACSG 268
Query: 161 ---IVEARKLFDKMPAKDVQAWNLMIAGYLD----NGCVGVAEDLFQKMHDRDLTSWKQL 213
IVE +++ + +++ + + +D G + A +F+ + D S +
Sbjct: 269 SQMIVEGQQIHALLWKFGIESELCIESALMDMYSKCGSIEDAWKIFESSQEVDEVSMTVI 328
Query: 214 INGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI-------RNGLVKEAHSYLEKYPY 266
+ GL + + AI +F +M + + +++S ++ GL K+ HS + K +
Sbjct: 329 LVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAILGVSFVDNSLGLGKQLHSLVIKRKF 388
Query: 267 SNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
N ++ Y + G++ + VF M R+ WN MI + G LK + +
Sbjct: 389 CGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEE 448
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQI-----HAQAIKIARNQFTTVSNAMITMY 380
M P + TF S+L CS + +D GR++ IK +T + I M
Sbjct: 449 MTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIKPRTEHYTCI----IDML 504
Query: 381 ARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAE----KALELFE 425
R G ++ A S+P+ D W +++ ++HG E A +LFE
Sbjct: 505 GRAGLMKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFE 554
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 188/649 (28%), Positives = 304/649 (46%), Gaps = 105/649 (16%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-----NGLIDEALRV 105
D F N ++ + ++ A++VFD RD+VTWN+++ Y +G E L +
Sbjct: 111 DHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHL 170
Query: 106 F----------------------------------HGMPLKDVVSWNLVI-GALVN---- 126
F HG +K + W++ + GALVN
Sbjct: 171 FRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSK 230
Query: 127 CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK------------ 174
C RM A F M RDV W +M+ G V+ G EA +LF +
Sbjct: 231 CGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLI 290
Query: 175 -----------------------------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR 205
DV N ++ Y GC A ++F M
Sbjct: 291 LNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHL 350
Query: 206 DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIIS----------VLIRN 251
DL SW +I+ S + +++ F + K T SI VL+
Sbjct: 351 DLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQ 410
Query: 252 GLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
G K+ H++ K + S++ + ++ Y + G++ +A VF ++ D W MI G
Sbjct: 411 G--KQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGC 468
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+N ++ L+ + +M++S PD TF +++ S + L+ GRQ+HA IK+
Sbjct: 469 VDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDP 528
Query: 371 TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT 430
V +++ MYA+CGNI+ A F + + +I WN+++ GLA HG AE+A+ LF+ M+
Sbjct: 529 FVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSH 588
Query: 431 DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE 490
+PD ++F+G+LSACS+AGL + Y M N Y ++P HY+C+VD LGR GL+ E
Sbjct: 589 GIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQE 648
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEM 550
A ++ + + S ++ ALLGACRI +++ G+ R+ LEP +S Y++L+ +
Sbjct: 649 ADKVIETM---PFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNI 705
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
Y + R +D MK VKK+PG SWI + + H+F+ D SHP+
Sbjct: 706 YAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQ 754
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 183/378 (48%), Gaps = 41/378 (10%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIA 60
R+++A+ LFD M +RD V WN+M++GY + G A LF++ D F+ ++
Sbjct: 233 RMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILN 292
Query: 61 GLM--QSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
G + +D+++ K+V G+ V+ DV NS+++ Y G A VF+ M D
Sbjct: 293 GCLWAGTDDLELGKQVH-GIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLD 351
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM---GAR----DVASWTIMVNG-------LVREG 159
++SWN +I + + + + F ++ G + +AS T+ L+ +G
Sbjct: 352 LISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQG 411
Query: 160 RIVEARKL---FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
+ + A + FD D+ + ++ Y+ G + A +F + D +W +I+G
Sbjct: 412 KQIHAHAIKAGFD----SDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISG 467
Query: 217 LVNSRRIDAAISYFKQMPETC----EKTWNSII---SVLIRNGLVKEAHSYLEKYP-YSN 268
V++ D A+ + +M ++ E T+ ++I S + ++ H+ + K S+
Sbjct: 468 CVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSD 527
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
T+++ Y + G + A ++F+ M R++ +WN M+ GL ++ EE + F MK
Sbjct: 528 PFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKS 587
Query: 329 SGPSPDNATFTSVLTICS 346
G PD +F +L+ CS
Sbjct: 588 HGIEPDRVSFIGILSACS 605
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
L LG+ HA+ + +SN ++TMY++CG++ SA F + P D+++WN+I+
Sbjct: 93 LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 152
Query: 411 LAYH-----GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
A G A++ L LF +R + +T VL C +G
Sbjct: 153 YAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSG 197
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/463 (35%), Positives = 258/463 (55%), Gaps = 27/463 (5%)
Query: 157 REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
R GR+ ARK+FD++P +D+ +WN MIAGY GC A ++F +M RD ++
Sbjct: 163 RCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEM--- 219
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVI 276
+ +S E + + G V E L Y S + S
Sbjct: 220 --------SLVSVLGACGELGDLELGRWV-----EGFVVERGMTLNSYIGSALISM---- 262
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G++GSA ++F+ M RDV WN +I G +N + +E + F MKE + +
Sbjct: 263 --YAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKI 320
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T T+VL+ C+ + LDLG+QI A + V+ A+I MYA+CG++ SA F +
Sbjct: 321 TLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEM 380
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERM--RLTDFKPDDITFVGVLSACSYAGLVDQ 454
P + SWN++I LA HG A++AL LF+ M +P+DITFVG+LSAC +AGLV++
Sbjct: 381 PQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNE 440
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
G FD M + L P+ HY+C+VDLL R G + EA +L+ ++ +V+ GALL
Sbjct: 441 GYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVT---LGALL 497
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
GACR N+ +GE ++E++P+NSG Y+I +++Y + ED+ R+ M++ G+ K
Sbjct: 498 GACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITK 557
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
PGCSWI++ + H F +GD L +++LL+ E++RE
Sbjct: 558 TPGCSWIEVENHLHEFHAGDGLCLDSIDLSNIIDLLYEELKRE 600
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 151/326 (46%), Gaps = 65/326 (19%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMF-------- 53
R R+ A+ +FD++P+RD V+WN MI GY K G A+ +F +M RD F
Sbjct: 163 RCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLV 222
Query: 54 ---------------------------TYNTVIAGLMQS-----DNVQGAKEVFDGMEVR 81
T N+ I + S ++ A+ +FDGM R
Sbjct: 223 SVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAAR 282
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-----LVIGALVNCQRMDLA--- 133
DV+TWN++ISGY NG+ DEA+ +FH M +D V+ N V+ A +DL
Sbjct: 283 DVITWNAVISGYAQNGMADEAISLFHAMK-EDCVTENKITLTAVLSACATIGALDLGKQI 341
Query: 134 ESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
+ Y + G D+ T +++ + G + A+++F +MP K+ +WN MI+ +G
Sbjct: 342 DEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKA 401
Query: 193 GVAEDLFQKMHDR-------DLTSWKQLI----NGLVNS--RRIDAAISYFKQMPETCEK 239
A LFQ M D D+T L GLVN R D + F +P+ +
Sbjct: 402 KEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKI--E 459
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYP 265
++ ++ +L R G + EA +EK P
Sbjct: 460 HYSCMVDLLARAGHLYEAWDLIEKMP 485
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 35/295 (11%)
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
FK + T +S+I++ R G V A ++ P ++ SW ++I GY + G A+
Sbjct: 143 FKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAV 202
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
+VF M RD G PD + SVL C +L
Sbjct: 203 EVFGEMGRRD------------------------------GFEPDEMSLVSVLGACGELG 232
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
L+LGR + ++ + + +A+I+MYA+CG++ SA F + D+I+WN++I
Sbjct: 233 DLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVIS 292
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
G A +G A++A+ LF M+ + IT VLSAC+ G +D G+ + + F Q
Sbjct: 293 GYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGF-Q 351
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
T ++D+ + G + A + E+ + + W A++ A H K
Sbjct: 352 HDIFVATALIDMYAKCGSLASAQRVFKEMP----QKNEASWNAMISALASHGKAK 402
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 177/430 (41%), Gaps = 79/430 (18%)
Query: 43 LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEA 102
+F D T +++I + V A++VFD + RD+V+WNSMI+GY G EA
Sbjct: 142 VFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREA 201
Query: 103 LRVFHGMPLK-----DVVSWNLVIGALVNCQRMDLA---ESYFKEMG-ARDVASWTIMVN 153
+ VF M + D +S V+GA ++L E + E G + + +++
Sbjct: 202 VEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALIS 261
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL 213
+ G + AR++FD M A+DV WN +I+GY NG A LF M + +T K
Sbjct: 262 MYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKIT 321
Query: 214 INGLVNSRRIDAAISYFKQMPETCEK--------TWNSIISVLIRNGLVKEAHSYLEKYP 265
+ ++++ A+ KQ+ E + ++I + + G + A ++ P
Sbjct: 322 LTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMP 381
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
N ASW +I G+ A+ +F+ M+ +EG
Sbjct: 382 QKNEASWNAMISALASHGKAKEALSLFQCMS--------------------DEG------ 415
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
G P++ TF +L+ C +HA + F +S
Sbjct: 416 ---GGARPNDITFVGLLSAC-----------VHAGLVNEGYRLFDMMSTL---------- 451
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
F VP I ++ ++ LA G+ +A +L E+M KPD +T +L A
Sbjct: 452 -------FGLVP--KIEHYSCMVDLLARAGHLYEAWDLIEKM---PEKPDKVTLGALLGA 499
Query: 446 CSYAGLVDQG 455
C VD G
Sbjct: 500 CRSKKNVDIG 509
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 48/266 (18%)
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISW 404
C++L L R H+ K+A + ++++ITMY+RCG + A F +P D++SW
Sbjct: 126 CANLAVLSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSW 185
Query: 405 NSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSACSYAGLVDQGRYY----- 458
NS+I G A G A +A+E+F M R F+PD+++ V VL AC G ++ GR+
Sbjct: 186 NSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVV 245
Query: 459 ------------------------------FDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
FD M + + + V+ + G+
Sbjct: 246 ERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVIT-----WNAVISGYAQNGMA 300
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG----EIAGERVMELEPNNSGVY 544
DEA++L + ++ D + + A+L AC + +G E A +R + ++ V
Sbjct: 301 DEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQ---HDIFVA 357
Query: 545 LILTEMYLSCGRREDAKRIFAQMKEN 570
L +MY CG A+R+F +M +
Sbjct: 358 TALIDMYAKCGSLASAQRVFKEMPQK 383
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 158/381 (41%), Gaps = 34/381 (8%)
Query: 7 QEAQNLFDKMP-QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ A +L K+ D T + +I Y + G + A +F+++P RD+ ++N++IAG ++
Sbjct: 136 RAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKA 195
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYV---CNGLID-------EALRVFHGMPLKDVV 115
+ A EVF M RD + M V C L D E V GM L +
Sbjct: 196 GCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYI 255
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
L I C + A F M ARDV +W +++G + G EA LF M
Sbjct: 256 GSAL-ISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDC 314
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHD--------RDLTSWKQLINGLVNSRRIDAAI 227
V + + L A DL +++ + D+ LI+ + +A
Sbjct: 315 VTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQ 374
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY------PYSNIASWTNVIVGYFE 281
FK+MP+ E +WN++IS L +G KEA S + N ++ ++
Sbjct: 375 RVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVH 434
Query: 282 MGEVGSAIKVFELMTT-----RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
G V ++F++M+T + ++ M+ L E +M E PD
Sbjct: 435 AGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPE---KPDKV 491
Query: 337 TFTSVLTICSDLPTLDLGRQI 357
T ++L C +D+G ++
Sbjct: 492 TLGALLGACRSKKNVDIGERV 512
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 172/538 (31%), Positives = 287/538 (53%), Gaps = 53/538 (9%)
Query: 111 LKDVVSWNLV-IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
LK V+ NL+ A++ MD A S F+++ D ++ IM+ G + EA LF
Sbjct: 54 LKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFK 113
Query: 170 KMPAKDVQA---------------------------------------WNLMIAGYLDNG 190
+M VQ N +I Y + G
Sbjct: 114 EMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCG 173
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE-TCEKTWNSIISVLI 249
V VA +F +M +R++ +W + G S + + F +M E +++SVL
Sbjct: 174 EVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLT 233
Query: 250 RNGLVKE------AHSYLE-KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
G + + + Y+E K N T+++ Y + G+V +A ++F+ M RDV
Sbjct: 234 ACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVA 293
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
W+ MI G + E L F +M+++ P+ T S+L+ C+ L L+ G+ +H I
Sbjct: 294 WSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHF-FI 352
Query: 363 KIARNQFT-TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
K R + T T+ A++ YA+CG+++S++ F +P+ +++SW +I GLA +G +KAL
Sbjct: 353 KKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKAL 412
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
E F M + +P+D+TF+GVLSACS+AGLVD+GR F M + ++PR HY C+VD+
Sbjct: 413 EYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDI 472
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LGR GLI+EA + + I+ + +W LL +C++H N+++GE + ++++ LEP +S
Sbjct: 473 LGRAGLIEEAFQFIKNM---PIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHS 529
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
G Y++L+ +Y S GR EDA ++ +MKE G+KK PGCS I+++ H F + D+ H +
Sbjct: 530 GDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQ 587
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 133/548 (24%), Positives = 236/548 (43%), Gaps = 109/548 (19%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTY--------- 55
A ++F ++ + D+ +N+MIRG+ A+ LF +M E D FT+
Sbjct: 77 AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136
Query: 56 --------------------------NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
NT+I V+ A+ VFD M R+V TWNSM
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSM 196
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQR---MDLAE---SYFKEMGA 142
+GY +G +E +++FH M D+ ++ L C R ++L E Y +E G
Sbjct: 197 FAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGL 256
Query: 143 RDVASW-TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
+ + T +V+ + G++ AR+LFD+M +DV AW+ MI+GY A DLF +
Sbjct: 257 KGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHE 316
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
M ++ + + +++S + A+ K W H ++
Sbjct: 317 MQKANIDPNEITMVSILSSCAVLGALETGK---------W---------------VHFFI 352
Query: 262 EKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+K + T ++ Y + G V S+I+VF M ++V W V+I GL N G++ L
Sbjct: 353 KKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKAL 412
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
++F M E P++ TF VL+ CS HA + R+ F ++S
Sbjct: 413 EYFYLMLEKNVEPNDVTFIGVLSACS-----------HAGLVDEGRDLFVSMSR------ 455
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
+F P I + ++ L G E+A + + M + +P+ + +
Sbjct: 456 -----------DFGIEP--RIEHYGCMVDILGRAGLIEEAFQFIKNMPI---QPNAVIWR 499
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQP-RSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
+L++C V+ G + +K L+P S Y + ++ G ++A+ + E++
Sbjct: 500 TLLASCKVHKNVEIGE---ESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMK 556
Query: 500 ADGIEVSP 507
GI+ +P
Sbjct: 557 EKGIKKTP 564
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 170/388 (43%), Gaps = 66/388 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM-FTYNTVIAGLM- 63
++ A+ +FD+M +R+ TWN M GY K+G + + LF++M E D+ F T+++ L
Sbjct: 175 VEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTA 234
Query: 64 -------------------------------------QSDNVQGAKEVFDGMEVRDVVTW 86
+ V A+ +FD M+ RDVV W
Sbjct: 235 CGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAW 294
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQRMDLAES-----YF--K 138
++MISGY EAL +FH M ++ + ++ L +C + E+ +F K
Sbjct: 295 SAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKK 354
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+ V T +++ + G + + ++F KMP K+V +W ++I G NG A +
Sbjct: 355 KRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEY 414
Query: 199 FQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLI 249
F M ++++ ++ +++ ++ +D F M E + + ++ +L
Sbjct: 415 FYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILG 474
Query: 250 RNGLVKEAHSYLEKYPYS-NIASWTNVIVGY-----FEMGEVG-SAIKVFELMTTRDVTV 302
R GL++EA +++ P N W ++ E+GE + + E + D +
Sbjct: 475 RAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYIL 534
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESG 330
+ + +G E+ LK +MKE G
Sbjct: 535 LSNIYASVGR---WEDALKVRGEMKEKG 559
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 114/252 (45%), Gaps = 26/252 (10%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
++ A+ LFD+M +RD V W+ MI GY + A+ LF++M + ++ + ++
Sbjct: 274 GQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSIL 333
Query: 64 QSDNVQGAKEV-------FDGMEVRDVVTW-NSMISGYVCNGLIDEALRVFHGMPLKDVV 115
S V GA E ++ VT +++ Y G ++ ++ VF MP+K+V+
Sbjct: 334 SSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVL 393
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKM 171
SW ++I L + + A YF M ++V + G++ G + E R LF M
Sbjct: 394 SWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSM 453
Query: 172 PAKD------VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS----WKQLINGLVNSR 221
++D ++ + M+ G G+ E+ FQ + + + W+ L+ +
Sbjct: 454 -SRDFGIEPRIEHYGCMVDIL---GRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHK 509
Query: 222 RIDAAISYFKQM 233
++ KQ+
Sbjct: 510 NVEIGEESLKQL 521
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/528 (29%), Positives = 267/528 (50%), Gaps = 46/528 (8%)
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A++ F +M RD+ SW +++ + G I + FD+MP +D ++N IAG+ N C
Sbjct: 77 AQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCP 136
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK--------TWNSI 244
+ +LF++M + I ++N+ + + Y KQ+ + WN++
Sbjct: 137 QESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNAL 196
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASW-------------------------------- 272
+ + G +++A + N+ SW
Sbjct: 197 TDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQ 256
Query: 273 ---TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
+ +I Y + G V A +VF +D+ W M+ G +N E+ L F +M
Sbjct: 257 VTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLE 316
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
PD+ T +SV++ C+ L +L G+ +H ++I N VS+A+I MY++CG I A
Sbjct: 317 HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDA 376
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F+ +P +++SWN++I G A +G+ + ALELFE M FKPD++TF+G+LSAC +
Sbjct: 377 RSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHC 436
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
++QG+ YFD + N++ + P HY C+V+LLGR G I++A+ L+ + D +
Sbjct: 437 NWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDP---DFLI 493
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
W LL C +I E+A + EL+P + Y++L+ MY S GR +D + MK
Sbjct: 494 WSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKS 553
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
VKK G SWI+I++ H F S D +HP+ + LN+L +++ E
Sbjct: 554 KNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEE 601
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 192/427 (44%), Gaps = 59/427 (13%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
++++AQNLFDKM +RD +WN ++ Y K+G + N F++MP RD +YNT IAG
Sbjct: 72 GKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFS 131
Query: 64 QSDNVQGAKEVFDGME----------VRDVVTWNSMIS----GYVCNGLIDEALRVFHGM 109
+ Q + E+F M+ + ++ ++ +S G +G I +R F G
Sbjct: 132 GNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSI--IVRNFLG- 188
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGR------IVE 163
+V WN + C ++ A F + +++ SW +M++G + G+ ++
Sbjct: 189 ---NVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLH 245
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV-NSRR 222
+L MP D + +IA Y G V A +F + ++D+ W ++ G N R
Sbjct: 246 QMRLSGHMP--DQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGRE 303
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTN-------V 275
DA + + + + E E ++ SV+ + H + S +A N +
Sbjct: 304 EDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSAL 363
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
I Y + G + A VF LM TR+V WN MI G +N ++ L+ F M + PDN
Sbjct: 364 IDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDN 423
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN------------AMITMYARC 383
TF +L+ C +H I+ + F +++N M+ + R
Sbjct: 424 VTFIGILSAC-----------LHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRT 472
Query: 384 GNIQSAL 390
G I+ A+
Sbjct: 473 GRIEQAV 479
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 196/646 (30%), Positives = 312/646 (48%), Gaps = 61/646 (9%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGL 62
QEA + + + + ++ + G L A L M + D+F +++
Sbjct: 64 QEAMAMLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVY 123
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG 122
M+ N Q A+ +FD M ++VVTW ++I+GY N AL VF M + +G
Sbjct: 124 MRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLG 183
Query: 123 ----ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR----EGRIVEARKLFDKMPAK 174
A V +DL + AS T + N L R G + + F ++P K
Sbjct: 184 GMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDK 243
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
+V W MI+ AED + + L + ++ G V MP
Sbjct: 244 NVITWTTMISA--------CAED--ENYTELGLNLFLDMLKGEV--------------MP 279
Query: 235 ETCEKTWNSIISVL---IRNGLVKEAHSYLEKYP-YSNIASWTNVIVGYFEMGEVGSAIK 290
E T S++S+ + L K+ + K +N+ + + Y GE A++
Sbjct: 280 N--EFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMR 337
Query: 291 VFELMTTRDVTVWNVMIFGLGE------NDL-----GEEGLKFFVQMKESGPSPDNATFT 339
+FE M V WN MI G + +DL G + LK F + S PD TF+
Sbjct: 338 LFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFS 397
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
S+L++CS + L+ G QIHAQ IK V++A++ MY +CG I+ A F +P
Sbjct: 398 SILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTR 457
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYF 459
+++W S+I G + HG A++LFE M L KP++ITFV +LSACSYAGLV++ YF
Sbjct: 458 TLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYF 517
Query: 460 DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI 519
D M+N+Y ++P HY C++D+ R G +D+A I+ G E + +W +L+ CR
Sbjct: 518 DMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAF---IKRKGFEPNEAIWSSLVAGCRS 574
Query: 520 HNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI--FAQMKENGVKKEPG 577
H N+++ A +R++EL+P Y++L MY+S GR D R+ ++ ++ G+ ++
Sbjct: 575 HGNMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDR- 633
Query: 578 CSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILFDAY 623
SWI I D + F + D SHP+ L LL L E + I ++ Y
Sbjct: 634 -SWITIRDKVYFFKADDRSHPQSTELYQLLETL-LEKAKAIGYEPY 677
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 217/506 (42%), Gaps = 87/506 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MR Q+A+NLFD+MP+++ VTW +I GY N A+ +F +M + + + +
Sbjct: 124 MRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLG 183
Query: 61 GLMQ----SDNVQGAKEV------FDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
G++ S N+ K+V + + + NS+ Y +G ++ +R F +P
Sbjct: 184 GMLSACVASHNIDLGKQVHGYTIKYGAASITSI--GNSLCRLYTKSGNLESGIRAFKRIP 241
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR---DVASWTIMVNGLVREGRIVEARKL 167
K+V++W +I A + + E+G D+ +M N +
Sbjct: 242 DKNVITWTTMISACAE-------DENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTS 294
Query: 168 FDKMPAKDVQ--------AWNLMIAG-----YLDNGCVGVAEDLFQKMHDRDLTSWKQLI 214
D K VQ A NL + YL G A LF++M D + +W +I
Sbjct: 295 LDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMI 354
Query: 215 NG---LVNSRRID--------AAISYFKQMPETCEK----TWNSIISVL-----IRNGLV 254
+G +++S + D A+ F+ + + K T++SI+SV + G
Sbjct: 355 SGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQG-- 412
Query: 255 KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
++ H+ K + S++ + ++ Y + G + A K F M TR + W MI G ++
Sbjct: 413 EQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQH 472
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
+ ++ F M +G P+ TF S+L+ CS +A ++ A F +
Sbjct: 473 GRPHDAIQLFEDMILAGAKPNEITFVSLLSACS-----------YAGLVEEAMRYFDMMQ 521
Query: 374 N------------AMITMYARCGNIQS--ALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
N MI M+ R G + A ++ ++ I W+S++ G HG E
Sbjct: 522 NEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAI-WSSLVAGCRSHGNME- 579
Query: 420 ALELFERMRLTDFKPDDI-TFVGVLS 444
L + RL + KP + T+V +L+
Sbjct: 580 -LAFYAADRLLELKPKVVETYVLLLN 604
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 255/473 (53%), Gaps = 43/473 (9%)
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG---------------YLDNGCV-- 192
I + + G + A +LF + D WN MI G ++NGCV
Sbjct: 17 IYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRP 76
Query: 193 ----------------------GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
GV +F+ + + LI N + A + F
Sbjct: 77 DKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALF 136
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+ W+++ + R G + A ++ P ++ SW +I GY + GE+ SA K
Sbjct: 137 DGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARK 196
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+F+ + RDV WN MI G ++ L+ F +M+ G PD T S+L+ C+DL
Sbjct: 197 LFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGD 256
Query: 351 LDLGRQIHAQAIKIA-RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
LD G++IH ++ R+ + NA+I MYA+CG+I AL F + D+ +WNS++
Sbjct: 257 LDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLG 316
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
GLA+HG+AEK++ LF MR +PD+ITFVGVL ACS+AG V++GR YFD M+++Y ++
Sbjct: 317 GLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIE 376
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
P HY C+VDLLGR GL++EA + ++ ++ IE + VW LLGACRIH N+++G A
Sbjct: 377 PNIRHYGCMVDLLGRAGLLNEAFDFIDTMK---IEPNAIVWRTLLGACRIHGNVELGRRA 433
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
+++++ + SG Y++L+ +Y S G + +++ M ++GV+KE GCS I+
Sbjct: 434 NMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIE 486
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 188/414 (45%), Gaps = 39/414 (9%)
Query: 34 NGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME---VR-DVVTWNSM 89
+G + A LF + E D F +NT+I G QS + A ++ ME VR D T+ +
Sbjct: 25 SGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFV 84
Query: 90 IS----------GYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKE 139
+ G+ +G RVF + N +I NC + +A + F
Sbjct: 85 LKACTRLCWVKMGFGVHG------RVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDG 138
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
RDV +W+ + G R G + AR+LFD+MP KD+ +WN+MI GY G + A LF
Sbjct: 139 SAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLF 198
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGLV- 254
++ RD+ +W +I G V A+ F++M E T S++S G +
Sbjct: 199 DEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLD 258
Query: 255 --KEAHSYLEKYPYSNIASWTN--VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
+ H + + + +++ +I Y + G + A++VF+ M +DV+ WN ++ GL
Sbjct: 259 AGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGL 318
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFT 370
+ E+ + F +M++ PD TF VL CS ++ GRQ + R+++
Sbjct: 319 AFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQY----FDLMRDEYN 374
Query: 371 TVSN-----AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAE 418
N M+ + R G + A ++ I + I W +++ HG E
Sbjct: 375 IEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVE 428
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 140/274 (51%), Gaps = 22/274 (8%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ LFD +RD V W+ + GY + G L A LF++MP +D+ ++N +I G + +
Sbjct: 132 ARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEM 191
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGAL 124
+ A+++FD + RDVVTWN+MI+GYV G +AL +F M L D V+ ++ A
Sbjct: 192 ESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSAC 251
Query: 125 VNCQRMDLAESY---FKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQ 177
+ +D + EMG RD++ ++ N L+ + G IV A ++F M KDV
Sbjct: 252 TDLGDLDAGQRIHCCISEMGFRDLS--VLLGNALIDMYAKCGSIVRALEVFQGMREKDVS 309
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHD----RDLTSWKQLINGLVNSRRIDAAISYFKQM 233
WN ++ G +G + LF +M D ++ ++ ++ R++ YF M
Sbjct: 310 TWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLM 369
Query: 234 P-----ETCEKTWNSIISVLIRNGLVKEAHSYLE 262
E + + ++ +L R GL+ EA +++
Sbjct: 370 RDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFID 403
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 179/424 (42%), Gaps = 74/424 (17%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-------------------- 48
A LF + + DT WN MIRG ++ NA+ L++QM
Sbjct: 31 AHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTR 90
Query: 49 -------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
E + F NT+I ++ A+ +FDG RDVV W+++
Sbjct: 91 LCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSAL 150
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWT 149
+GY G + A ++F MP+KD+VSWN++I M+ A F E+ RDV +W
Sbjct: 151 TAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWN 210
Query: 150 IMVNGLVREGRIVEARKLFDKMPA-----KDVQAWNLMIA----GYLDNG-----CVGVA 195
M+ G V G +A ++F++M + +V +L+ A G LD G C+
Sbjct: 211 AMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCI--- 267
Query: 196 EDLFQKMHDRDLTSW--KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
+M RDL+ LI+ I A+ F+ M E TWNS++ L +G
Sbjct: 268 ----SEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGH 323
Query: 254 V-KEAHSYLEKYPYS---NIASWTNVIVGYFEMGEVGSAIKVFELMTTR-----DVTVWN 304
K H + E + ++ V+V G V + F+LM ++ +
Sbjct: 324 AEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYG 383
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
M+ LG L E F MK P+ + ++L C ++LGR+ + Q +K+
Sbjct: 384 CMVDLLGRAGLLNEAFDFIDTMK---IEPNAIVWRTLLGACRIHGNVELGRRANMQLLKM 440
Query: 365 ARNQ 368
++
Sbjct: 441 RHDE 444
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 103/214 (48%), Gaps = 44/214 (20%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R + A+ LFD+MP +D V+WNVMI GY K G +++A LF+++P+RD+ T+N +IAG
Sbjct: 156 RRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAG 215
Query: 62 LMQSDNVQGAKEVFDGM----EVRDVVTWNSMISG-------------YVC--------- 95
+ + Q A E+F+ M E+ D VT S++S + C
Sbjct: 216 YVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDL 275
Query: 96 -----NGLID---------EALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
N LID AL VF GM KDV +WN V+G L + + F EM
Sbjct: 276 SVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMR 335
Query: 142 ARDVASWTIMVNGLV----REGRIVEARKLFDKM 171
+ I G++ GR+ E R+ FD M
Sbjct: 336 KLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLM 369
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 186/628 (29%), Positives = 323/628 (51%), Gaps = 41/628 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTV-IA 60
R+ ++ A+ +F M RD V++N +I G + GF D A+ LF +M +RD + + +A
Sbjct: 308 RSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKM-QRDCLKPDCITVA 366
Query: 61 GLMQSDNVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMP 110
L+ + GA + GM++ D++ S++ Y ++ A + F
Sbjct: 367 SLLSACASVGA--LHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTE 424
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+++V WN+++ A + + F++M + ++R + A L ++
Sbjct: 425 TENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQ 484
Query: 171 MPAK--------DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ +V +++I Y G + +A + +++ + D+ SW +I G V
Sbjct: 485 IHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDM 544
Query: 223 IDAAISYFKQMPETCEKTWN----SIISVL-----IRNGLVKEAHSYLEKYPYSNIASWT 273
A+ F++M + N S IS +R G A SY + ++++
Sbjct: 545 FSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFG-ADLSINN 603
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
+I Y G + A FE + ++ WN ++ GL ++ EE L+ FV+M +
Sbjct: 604 ALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEV 663
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+ T+ S ++ + L + G+QIH+ +K + VSN++I++YA+ G+I A EF
Sbjct: 664 NMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREF 723
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+ + ++ISWN++I G + HG +AL LFE M++ P+ +TFVGVLSACS+ GLV
Sbjct: 724 NDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVK 783
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+G YF+ M + L P+S HY CVVDLLGR G +D AM + E+ I +W L
Sbjct: 784 EGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEM---PIPADAMIWRTL 840
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR---REDAKRIFAQMKEN 570
L AC IH NI++GE A ++ELEP +S Y++++ +Y + R+ ++++ MK+
Sbjct: 841 LSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKL---MKDX 897
Query: 571 GVKKEPGCSWIQINDGGHVFLSGDSSHP 598
GVKKEPG SWI++ + H F +GD HP
Sbjct: 898 GVKKEPGRSWIEVKNAVHAFYAGDKLHP 925
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 161/635 (25%), Positives = 270/635 (42%), Gaps = 72/635 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R+ A +FD+ R +WN MI + CLF +M + AG
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAG 164
Query: 62 LMQSDNVQG-----------AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
++++ V G ++ + G + +V N +I Y NG I+ A +VF+ +
Sbjct: 165 VLKA-CVGGDIAFNYVKQVHSRTFYYGFDSSPLVA-NLLIDLYSKNGYIESAKKVFNCIC 222
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+KD+V+W +I L + A F +M A ++ +++ ++ ++ +L ++
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGV---------AEDLFQKMHDRDLTSWKQLINGLVNSR 221
+ ++ W Y+ NG V + AE +F M+ RD S+ LI+GLV
Sbjct: 283 LHCLVIK-WGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG 341
Query: 222 RIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEA---HSYLEKYPYS-NIASWT 273
D A+ F +M C K T S++S G + + HS+ K S +I
Sbjct: 342 FSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEG 401
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
+++ Y + +V +A K F T ++ +WNVM+ G+ D + + F QM+ G P
Sbjct: 402 SLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIP 461
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+ T+ S+L C+ L L LG QIH IK V + +I MYA+ G + AL
Sbjct: 462 NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRIL 521
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+P D++SW ++I G H +AL+LFE M + D+I F +SAC+ +
Sbjct: 522 RRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALR 581
Query: 454 QGR-----------------------YYFDC--MKNKYFL-----QPRSAHYTCVVDLLG 483
QG+ Y C ++ Y + + +V L
Sbjct: 582 QGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLA 641
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM------ELE 537
+ G +EA+ + + EV+ +G+ + A NIK G+ V+ E E
Sbjct: 642 QSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSERE 701
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+NS L +Y G DA R F M E V
Sbjct: 702 VSNS-----LISLYAKSGSISDAWREFNDMSERNV 731
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 215/483 (44%), Gaps = 45/483 (9%)
Query: 135 SYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN---- 189
++ +E G R + ++ ++ G + G + E +L ++ L+I +DN
Sbjct: 47 NFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRH 106
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETCEKTWNSIISVL 248
G A +F + +R + SW ++I+ V + F++M E + VL
Sbjct: 107 GDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVL 166
Query: 249 -------IRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDV 300
I VK+ HS Y + + N+++ Y + G + SA KVF + +D+
Sbjct: 167 KACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDI 226
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W MI GL +N L EE + F M S P +SVL+ + + +LG Q+H
Sbjct: 227 VTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL 286
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
IK + T V N ++ +Y+R + SA FS++ D +S+NS+I GL G++++A
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-----------------------Y 457
LELF +M+ KPD IT +LSAC+ G + +G
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDL 406
Query: 458 YFDC----MKNKYFLQPRSAHYTCVVDLLGRFGLID---EAMNLLNEIRADGIEVSPTVW 510
Y C +K+FL + + +L +G +D ++ + +++ +G+ + +
Sbjct: 407 YSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTY 466
Query: 511 GALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
++L C + +GE V++ N V +L +MY G+ A RI ++ E
Sbjct: 467 PSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPE 526
Query: 570 NGV 572
+ V
Sbjct: 527 DDV 529
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/660 (27%), Positives = 317/660 (48%), Gaps = 75/660 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
+ A+ LFD MP+R+ V++ +++GY G + A LF ++ E + F T++
Sbjct: 100 LAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKV 159
Query: 62 LMQSDN-----------------------------------VQGAKEVFDGMEVRDVVTW 86
L+ D V A+ VFDG+ +D VTW
Sbjct: 160 LVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTW 219
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN---CQRMDLAESYFKEMGAR 143
+M+S Y N + ++AL F M + V+ +++ C + +
Sbjct: 220 TAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVK 279
Query: 144 DVASWTIMVNGLVRE-----GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+ V G + + G I +AR +F+ +P DV W+ +I+ Y + A ++
Sbjct: 280 TLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEM 339
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
F +M + + ++G++ + A +++ L ++ H
Sbjct: 340 FLRMMRSSVVPNEFSLSGVLQA---CANVAFLD---------------------LGQQIH 375
Query: 259 SYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ + K Y + N ++ Y + + +++++F + + WN +I G ++ E
Sbjct: 376 NLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAE 435
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
+ L F +M+ + TF+SVL C++ ++ QIH+ K N T V N++I
Sbjct: 436 DALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLI 495
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
YA+CG I+ AL F S+ D++SWN+II G A HG A ALELF RM +D KP+D+
Sbjct: 496 DTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDV 555
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
TFV +LS C GLV+QG F+ M + ++P HYTC+V LLGR G +++A+ + +
Sbjct: 556 TFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGD 615
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
I + SP VW ALL +C +H N+ +G+ + E+V+E+EP + Y++L+ MY + G
Sbjct: 616 IPSTP---SPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGIL 672
Query: 558 EDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
+ + M+ GVKKE G SW++I H F G + HP + +L L+ + RE
Sbjct: 673 DQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASRE 732
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 100/226 (44%), Gaps = 3/226 (1%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y ++G + +A ++F+ M R++ + ++ G EE F +++ G ++
Sbjct: 94 YAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVL 153
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
T++L + + L IHA A K+ ++ V +++I Y+ CG + A F +
Sbjct: 154 TTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIW 213
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
D ++W +++ + + E AL F +MR+ KP+ VL A G+
Sbjct: 214 KDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGI 273
Query: 459 FDC-MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
C +K +P ++D+ + G I++A + I D +
Sbjct: 274 HGCAVKTLCDTEPHVG--GALLDMYAKCGYIEDARTVFEIIPHDDV 317
>gi|15220808|ref|NP_173207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75175206|sp|Q9LNP2.1|PPR47_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g17630
gi|8778465|gb|AAF79473.1|AC022492_17 F1L3.33 [Arabidopsis thaliana]
gi|332191495|gb|AEE29616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 731
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 300/587 (51%), Gaps = 84/587 (14%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR--- 81
N ++ Y K G + +A LF +MP R+ ++N +I G Q + + A ++F+ M+
Sbjct: 197 NELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFK 256
Query: 82 -DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
D VTW S++S + G ++ L+ FH M + G V+ + + + S E+
Sbjct: 257 PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMS---------GNAVSGEALAVFFSVCAEL 307
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
A +A V+G V +G E +P++ N +I Y G V AE LF+
Sbjct: 308 EALSIAE---KVHGYVIKGGFEEY------LPSR-----NALIHVYGKQGKVKDAEHLFR 353
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
++ ++ + SW LI V++ ++D A+S F ++ E N + +V
Sbjct: 354 QIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEM-----NHVCNV------------- 395
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
+N+ +WT+VI G G G++ L
Sbjct: 396 -----KANVVTWTSVIKGCNVQGR-------------------------------GDDSL 419
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
++F QM+ S ++ T +L+IC++LP L+LGR+IH I+ + ++ V NA++ MY
Sbjct: 420 EYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMY 479
Query: 381 ARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFV 440
A+CG + L F ++ D+ISWNSII G HG+AEKAL +F+RM + F PD I V
Sbjct: 480 AKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALV 539
Query: 441 GVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA 500
VLSACS+AGLV++GR F M ++ L+P+ HY C+VDLLGR G + EA ++ +
Sbjct: 540 AVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM-- 597
Query: 501 DGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDA 560
+E V GALL +CR+H N+ + E ++ LEP +G Y++L+ +Y + GR E++
Sbjct: 598 -PMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEES 656
Query: 561 KRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
+ A K+ +KK G SWI++ + F SG +F + +L
Sbjct: 657 ANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVL 703
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 177/381 (46%), Gaps = 53/381 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ R+ +A NLF +MP R+ ++WNVMI+G+ + ++A+ +F M +R+ F
Sbjct: 205 KAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWM-QREEFK------- 256
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-DVVSWNLV 120
D VTW S++S + G ++ L+ FH M + + VS +
Sbjct: 257 -------------------PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEAL 297
Query: 121 IGALVNCQRMD---LAES---YFKEMGARD-VASWTIMVNGLVREGRIVEARKLFDKMPA 173
C ++ +AE Y + G + + S +++ ++G++ +A LF ++
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD--------RDLTSWKQLINGLVNSRRIDA 225
K +++WN +I ++D G + A LF ++ + ++ +W +I G R D
Sbjct: 358 KGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDD 417
Query: 226 AISYFKQMPETCEKTWNSIISVLIRN--------GLVKEAHSYLEKYPYS-NIASWTNVI 276
++ YF+QM + + NS+ I + L +E H ++ + S NI ++
Sbjct: 418 SLEYFRQM-QFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALV 476
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + VFE + +D+ WN +I G G + E+ L F +M SG PD
Sbjct: 477 NMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGI 536
Query: 337 TFTSVLTICSDLPTLDLGRQI 357
+VL+ CS ++ GR+I
Sbjct: 537 ALVAVLSACSHAGLVEKGREI 557
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 166/375 (44%), Gaps = 24/375 (6%)
Query: 151 MVNGLVREGRIVEARKLFDKMPA---KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL 207
+++ R G +++AR +F+ + D++ WN ++ + +G A +L++ M R L
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 208 TSWKQLINGLVNS----RRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHS 259
T ++ ++ + R ++ Q+ + K N ++++ + G + +A++
Sbjct: 155 TGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYN 214
Query: 260 YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTR----DVTVWNVMIFGLGENDL 315
+ P N SW +I G+ + + SA+K+FE M D W ++ +
Sbjct: 215 LFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGK 274
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
E+ LK+F M+ SG + ++C++L L + ++H IK ++ NA
Sbjct: 275 FEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNA 334
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM----RLTD 431
+I +Y + G ++ A F + I SWNS+I G ++AL LF + + +
Sbjct: 335 LIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCN 394
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
K + +T+ V+ C+ G D YF M+ L S C++ + A
Sbjct: 395 VKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVL-ANSVTICCILSICAEL----PA 449
Query: 492 MNLLNEIRADGIEVS 506
+NL EI I S
Sbjct: 450 LNLGREIHGHVIRTS 464
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 158/348 (45%), Gaps = 28/348 (8%)
Query: 273 TNVIVGYFEMGEVGSAIKVFE---LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
N+I Y +G + A VFE L+ D+ +WN ++ + L E L+ + M++
Sbjct: 93 ANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQR 152
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G + D +L C L L R H Q I+I + V N ++T+Y + G + A
Sbjct: 153 GLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDA 212
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F +P+ + +SWN +I G + E A+++FE M+ +FKPD++T+ VLS S
Sbjct: 213 YNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQC 272
Query: 450 GLVDQGRYYFDCMK---NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRA----DG 502
G + YF M+ N + + ++ +L EA+++ ++ G
Sbjct: 273 GKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAEL--------EALSIAEKVHGYVIKGG 324
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGV--YLILTEMYLSCGRREDA 560
E AL IH K G++ + + N G+ + L ++ G+ ++A
Sbjct: 325 FEEYLPSRNAL-----IHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEA 379
Query: 561 KRIFAQMKE-NGV--KKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRY 605
+F++++E N V K +W + G +V GD S F ++++
Sbjct: 380 LSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQF 427
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 123/281 (43%), Gaps = 40/281 (14%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ ++++A++LF ++ + +WN +I + G LD A+ LF+++ E +
Sbjct: 341 KQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVC------- 393
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
NV+ +VVTW S+I G G D++L F M V++ ++ I
Sbjct: 394 -----NVKA-----------NVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTI 437
Query: 122 GALVN-CQRM-------DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
+++ C + ++ + + ++ +VN + G + E +F+ +
Sbjct: 438 CCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRD 497
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKM----HDRDLTSWKQLINGLVNSRRIDAAISY 229
KD+ +WN +I GY +G A +F +M D + +++ ++ ++
Sbjct: 498 KDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREI 557
Query: 230 FKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
F M E ++ + I+ +L R G +KEA ++ P
Sbjct: 558 FYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 250/454 (55%), Gaps = 15/454 (3%)
Query: 156 VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
+ EG+I+ A L + D+ N ++ Y G + A LF +M RD+ +W LI
Sbjct: 31 LNEGKIIHAL-LLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALIT 89
Query: 216 GLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG---------LVKEAHSYLEKYPY 266
G R A+ +M K ++ L++ ++ H +Y Y
Sbjct: 90 GYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGY 149
Query: 267 -SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
SN+ ++ Y + A +F++M +++ WN +I G G++ F
Sbjct: 150 DSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSN 209
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M P + T++SVL C+ + +L+ G+ +HA IK V N ++ MYA+ G+
Sbjct: 210 MLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGS 269
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
I+ A F + D++SWNS++ G + HG + AL+ FE M T P+DITF+ VL+A
Sbjct: 270 IEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTA 329
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
CS+AGL+D+GR+YFD MK KY ++P+ +HY +VDLLGR G +D A+ ++E+ I+
Sbjct: 330 CSHAGLLDEGRHYFDMMK-KYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEM---PIKP 385
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
+ VWGALLGACR+H N+++G A E + EL+ + G +++L +Y GR DA ++
Sbjct: 386 TAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRK 445
Query: 566 QMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
MKE+GVKKEP CSW+++ + HVF++ D +HP+
Sbjct: 446 MMKESGVKKEPACSWVEMENEVHVFVADDDAHPQ 479
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 163/414 (39%), Gaps = 63/414 (15%)
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
Q N GA+E+ + ++ N + G + + L+ + D+V N ++
Sbjct: 7 QCKNNAGAREICHTL-LKRCTHLNKLNEGKIIHALL------LNSRFRDDLVMQNTLLNL 59
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM------------ 171
C + A F EM +RDV +WT ++ G + R +A L +M
Sbjct: 60 YAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTL 119
Query: 172 -----PAKDVQAWNLMIAGYLDNGCVGVAED------------------------LFQKM 202
A V + +++ L C+ D +F M
Sbjct: 120 ASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVM 179
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEA- 257
++ SW LI G + D A F M K T++S++ G +++
Sbjct: 180 VSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGK 239
Query: 258 --HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
H+ + K+ +A N ++ Y + G + A KVF+ + RDV WN M+ G ++
Sbjct: 240 WVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHG 299
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
LG+ L+ F +M + +P++ TF VLT CS LD GR K +
Sbjct: 300 LGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYV 359
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYH------GYAEKAL 421
M+ + R G++ A+ S +PI + W +++ H GYA + +
Sbjct: 360 TMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECI 413
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 107/232 (46%), Gaps = 48/232 (20%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
R ++EAQ +FD M ++ V+WN +I GY + G D A CLF+ M ++ FTY++
Sbjct: 165 RCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSS 224
Query: 58 VIA---------------GLM--------------------QSDNVQGAKEVFDGMEVRD 82
V+ LM +S +++ AK+VFD + RD
Sbjct: 225 VLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRD 284
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFK 138
VV+WNSM++GY +GL AL+ F M + +++ V+ A + +D YF
Sbjct: 285 VVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFD 344
Query: 139 EMGARDV----ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA-WNLMIAG 185
M +V + + MV+ L R G + A + +MP K A W ++
Sbjct: 345 MMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGA 396
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 171/394 (43%), Gaps = 71/394 (18%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI---AG 61
A+ LFD+M RD VTW +I GY ++ +A+ L +M + + FT +++ +G
Sbjct: 69 ARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASG 128
Query: 62 LMQSDNVQG----------------------------------AKEVFDGMEVRDVVTWN 87
+ +D +QG A+ +FD M ++ V+WN
Sbjct: 129 VGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWN 188
Query: 88 SMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA-LVNCQRMDLAE------SYFKEM 140
++I+GY G D+A +F M ++V + + L C M E + +
Sbjct: 189 ALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKW 248
Query: 141 GARDVA-SWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
G + VA +++ + G I +A+K+FD++ +DV +WN M+ GY +G VA F
Sbjct: 249 GEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRF 308
Query: 200 QKM-----HDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIR 250
++M D+T + ++ ++ +D YF M E + +++ +L R
Sbjct: 309 EEMLRTRIAPNDIT-FLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGR 367
Query: 251 NGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMG---EVG--SAIKVFELMTT---RDVTV 302
G + A ++ + P A+ ++G M E+G +A +FEL + V +
Sbjct: 368 AGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLL 427
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
+N+ ND K MKESG + A
Sbjct: 428 YNIYALAGRWND----AAKVRKMMKESGVKKEPA 457
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 111/272 (40%), Gaps = 45/272 (16%)
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
++L C+ L L+ G+ IHA + + N ++ +YA+CG++ A F +
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 400 DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD--QGRY 457
D+++W ++I G + H + AL L M KP+ T +L A S G D QGR
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139
Query: 458 YFD-CMKNKY-----------------------------FLQPRSAHYTCVVDLLGRFGL 487
C++ Y + + ++ R G
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA-------GERVMELEPNN 540
D+A L + + + ++ + + ++L AC +++ G+ GE+++ N
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
L +MY G EDAK++F ++ + V
Sbjct: 260 ------LLDMYAKSGSIEDAKKVFDRLAKRDV 285
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
++ I++A+ +FD++ +RD V+WN M+ GY ++G A+ F +M + T+
Sbjct: 266 KSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLC 325
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMP 110
V+ + + + FD M+ +V IS YV G +D A++ MP
Sbjct: 326 VLTACSHAGLLDEGRHYFDMMKKYNV---EPQISHYVTMVDLLGRAGHLDRAIQFISEMP 382
Query: 111 LKDVVS-WNLVIGALVNCQRMDL----AESYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
+K + W ++GA + M+L AE F E+ + + ++ N GR +A
Sbjct: 383 IKPTAAVWGALLGACRMHKNMELGGYAAECIF-ELDSHYPGTHVLLYNIYALAGRWNDAA 441
Query: 166 KLFDKMPAKDVQ 177
K+ M V+
Sbjct: 442 KVRKMMKESGVK 453
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 179/655 (27%), Positives = 313/655 (47%), Gaps = 60/655 (9%)
Query: 19 RDTVTWNVMIRGYFKNGFLDNAMCLFN--QMPERDMFTYNTVIAGLMQSDNVQGAKEVFD 76
+ T+ N +I Y K G LD+A+ +F Q RD+ ++N+V++G +Q+ A +F
Sbjct: 197 KSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFR 256
Query: 77 GMEV--------------------------RDV------------VTWNSMISGYVCNGL 98
GM+ R++ + N+++ Y G
Sbjct: 257 GMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCNALLVMYAKYGR 316
Query: 99 IDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARD-------VASWTIM 151
+D ALRVF + KD +SWN ++ V A +F EM V S +
Sbjct: 317 VDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSA 376
Query: 152 VNGLVR--EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+ L R GR A + ++ D+Q N ++ Y+ G + + +F+ M RD S
Sbjct: 377 LGHLSRLNNGREFHAYAIKQRLHT-DLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHIS 435
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN-------GLVKEAHSYLE 262
W ++ S R A+ ++ + + +I ++ L+K+ H Y
Sbjct: 436 WTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAI 495
Query: 263 KYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ ++ +I Y E GE ++ +F+ + +D+ W MI N +
Sbjct: 496 RNGLLDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFL 555
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
F +M+++ PD+ S+L + L +L G+Q+H I+ V ++++ MY+
Sbjct: 556 FTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSG 615
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CG++ A+ F D++ W ++I HG+ ++A++LF+RM T PD ++F+ +
Sbjct: 616 CGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLAL 675
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
L ACS++ LV++G++Y D M +KY L+P HY CVVD+LGR G +EA + + D
Sbjct: 676 LYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMD- 734
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
VW ALLGACR+H N + +A +++ELEP+N G Y++++ ++ G+ +AK
Sbjct: 735 --PKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKE 792
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
+M E G++K P CSWI+I + H F SGD H + L+ + + RE
Sbjct: 793 TRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRRE 847
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 134/556 (24%), Positives = 245/556 (44%), Gaps = 44/556 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PERDMFT 54
R R+ +A+ LF+ MP R +WN ++ Y +G AM ++ M D T
Sbjct: 107 RCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCT 166
Query: 55 YNTVIAGLMQSDNVQGAKEVFDGMEV-----RDVVTWNSMISGYVCNGLIDEALRVFHGM 109
+V+ + + EV G+ V + + N++I Y GL+D ALRVF +
Sbjct: 167 LASVLKACGAEGDGRCGGEV-HGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWL 225
Query: 110 P--LKDVVSWNLVIGALVNCQRMDLAESYFKEMGA--------RDVASWTIMVN-GLVRE 158
+DV SWN V+ V R A + F+ M + VA + GL+
Sbjct: 226 QQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSL 285
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
GR + A L ++Q N ++ Y G V A +F ++ ++D SW +++ V
Sbjct: 286 GRELHA-ALLKCGSELNIQC-NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYV 343
Query: 219 NSRRIDAAISYFKQMPE-------TCEKTWNSIISVLIRNGLVKEAHSY-LEKYPYSNIA 270
+ AI +F +M + C + +S + L R +E H+Y +++ ++++
Sbjct: 344 QNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQ 403
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
++ Y + G + + KVFE M RD W ++ ++ E L+ +++++ G
Sbjct: 404 VGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEG 463
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF--TTVSNAMITMYARCGNIQS 388
D+ S+L C L ++ L +Q+H AI RN + N +I +Y CG
Sbjct: 464 IMVDSMMIGSILETCCGLKSISLLKQVHCYAI---RNGLLDLILENRLIDIYGECGEFDH 520
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
+L F V DI+SW S+I +G A+ LF M+ + +PD + V +L A +
Sbjct: 521 SLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAG 580
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
+ +G+ + + F + +VD+ G ++ A+ + + +
Sbjct: 581 LSSLTKGKQVHGFLIRRNF-PIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDV----V 635
Query: 509 VWGALLGACRIHNNIK 524
+W A++ A +H + K
Sbjct: 636 LWTAMINATGMHGHGK 651
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 122/256 (47%), Gaps = 14/256 (5%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES--- 329
T ++ Y G V A ++F M R V WN ++ + E ++ + M+ S
Sbjct: 99 TKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAP 158
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G +PD T SVL C G ++H A+K+ ++ T V+NA+I MYA+CG + SA
Sbjct: 159 GSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSA 218
Query: 390 L--LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
L E+ D+ SWNS++ G +G +AL LF M+ F + T V VL C+
Sbjct: 219 LRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCA 278
Query: 448 YAGLVDQGR-YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
GL+ GR + +K L + ++ + ++G +D A+ + +I E
Sbjct: 279 ELGLLSLGRELHAALLKCGSELNIQC---NALLVMYAKYGRVDSALRVFGQI----AEKD 331
Query: 507 PTVWGALLGACRIHNN 522
W ++L +C + N+
Sbjct: 332 YISWNSML-SCYVQNS 346
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 14/201 (6%)
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI---KIARNQFTTVSNAMITMYA 381
Q+ P P + VL + + GRQ+HA A+ + + ++ ++ MY
Sbjct: 48 QLTTRAP-PAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYG 106
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLT---DFKPDDIT 438
RCG + A F+ +P + SWN+++ G A +A+ ++ MR + PD T
Sbjct: 107 RCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCT 166
Query: 439 FVGVLSACSYAGLVDQGRYYFDC--MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
VL AC G GR + + K L + ++ + + GL+D A+ +
Sbjct: 167 LASVLKACGAEG---DGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFE 223
Query: 497 EIRADGIEVSPTVWGALLGAC 517
++ D +V+ W +++ C
Sbjct: 224 WLQQDARDVAS--WNSVVSGC 242
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/454 (34%), Positives = 252/454 (55%), Gaps = 18/454 (3%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLI 214
GR+ AR+LF+ MP+++V W + +A + NGC A F++M+ D ++ ++
Sbjct: 111 GRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVIL 170
Query: 215 NG--------LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
+ R I +P T ++IS+ + G + +A + E+ +
Sbjct: 171 AAIAQMGAAAIDQGREIHRYARISGLLPNVVVGT--AVISMYGKCGRLDDARAAFEELQW 228
Query: 267 SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
N +W ++ Y G A+++F M D WN MI ++ G++ L + M
Sbjct: 229 KNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSM 288
Query: 327 KESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
++ +P TF +V+ +C++L L GR IHA+ + VSNA++ MY +CG
Sbjct: 289 HDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGC 348
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+ AL F S+ + D ISWN+II AYHG++++AL L++ M L KP ++TFVG+LSA
Sbjct: 349 LDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSA 408
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
CS+ GLV G YF M++ + ++P H+ C++DLLGR G + EA +L + I+
Sbjct: 409 CSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSM---PIQA 465
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
+ W +LLGAC+ H ++K G A ++V++ P SG Y++L+ +Y + GR +D ++I
Sbjct: 466 NAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRK 525
Query: 566 QMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
M GVKK PG SWI+I D H F+SGDSSHP+
Sbjct: 526 IMAARGVKKSPGKSWIEIGDVVHEFVSGDSSHPQ 559
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 164/420 (39%), Gaps = 57/420 (13%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
R+ A+ LF+ MP R+ TW V + + NG A+ F +M + + ++
Sbjct: 111 GRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVIL 170
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
+ GA + G E+ + ISG L +VV VI
Sbjct: 171 AAIAQMGAAAIDQGREIHRY----ARISGL-----------------LPNVVVGTAVISM 209
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMI 183
C R+D A + F+E+ ++ +W M+ +GR EA +LF +M D WN MI
Sbjct: 210 YGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMI 269
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ--MPETCEKTW 241
A Y +G A DL++ MHD + KQ V + A +S KQ +
Sbjct: 270 AAYAQHGRGKQALDLYRSMHDTTDLAPKQ--GTFVTVIDVCAELSALKQGRAIHARVRAT 327
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N ++L+ N LV Y + G + A+ VF M +D
Sbjct: 328 NFDANLLVSNALVHM----------------------YGKCGCLDEALDVFHSMKLKDEI 365
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG-----RQ 356
WN +I + ++ L + +M G P TF +L+ CS + G R
Sbjct: 366 SWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRM 425
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHG 415
IK + F + I + R G + A L S+PI + + W S++ HG
Sbjct: 426 QDDHRIKPSVPHFGCI----IDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHG 481
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 122/283 (43%), Gaps = 38/283 (13%)
Query: 254 VKEAHSYLEKYPYSNIAS--WTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGL 310
+ HS++ P+SN N+++ Y + G + A ++FE M +R+V W V +
Sbjct: 79 ARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAF 138
Query: 311 GENDLGEEGLKFFVQMKESGPSPDNATFTSVL--TICSDLPTLDLGRQIHAQAIKIARNQ 368
N E L FF +M +SG PD TF+ +L +D GR+IH A
Sbjct: 139 SHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLP 198
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSV-----------------------------PIH 399
V A+I+MY +CG + A F + +H
Sbjct: 199 NVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMH 258
Query: 400 DI--ISWNSIICGLAYHGYAEKALELFERMR-LTDFKPDDITFVGVLSACSYAGLVDQGR 456
D + WN++I A HG ++AL+L+ M TD P TFV V+ C+ + QGR
Sbjct: 259 DADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGR 318
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR 499
++ F +V + G+ G +DEA+++ + ++
Sbjct: 319 AIHARVRATNF-DANLLVSNALVHMYGKCGCLDEALDVFHSMK 360
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 14/264 (5%)
Query: 313 NDLGE-EGLKFFVQMKESGP-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI--ARNQ 368
N GE E L +Q+ ES D + +++ C + R++H+ + + + +Q
Sbjct: 36 NSFGERESLHKSIQLLESRELELDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQ 95
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
++N +I MY +CG + A F S+P ++ +W + +++G +AL F RM
Sbjct: 96 PPFLANLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMY 155
Query: 429 LTDFKPDDITFVGVL--SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
+ +PD +TF +L A A +DQGR + L P T V+ + G+ G
Sbjct: 156 QSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLL-PNVVVGTAVISMYGKCG 214
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
+D+A E++ + W A++ ++ + A E E+ +S +
Sbjct: 215 RLDDARAAFEELQWK----NSVTWNAMMTNYKLDGRDRE---ALELFREMHDADSVCWNA 267
Query: 547 LTEMYLSCGRREDAKRIFAQMKEN 570
+ Y GR + A ++ M +
Sbjct: 268 MIAAYAQHGRGKQALDLYRSMHDT 291
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 118/308 (38%), Gaps = 67/308 (21%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PERDMFTY 55
+ R +EA LF +M D+V WN MI Y ++G A+ L+ M P++ F
Sbjct: 244 DGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFV- 302
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
TVI + ++ + + + +++ N+++ Y G +DEAL VFH M L
Sbjct: 303 -TVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKL 361
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
KD +SWN +I + D A ++EM + V + GL
Sbjct: 362 KDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGL---------------- 405
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
++ G V D F +M D RI ++ +F
Sbjct: 406 -----------LSACSHGGLVADGLDYFYRMQD---------------DHRIKPSVPHF- 438
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYP-YSNIASWTNVIVGYFEMGEVGSAIK 290
II +L R G + EA L+ P +N W +++ G++ ++
Sbjct: 439 ----------GCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVR 488
Query: 291 VFELMTTR 298
+ + R
Sbjct: 489 AADQVVDR 496
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 182/692 (26%), Positives = 326/692 (47%), Gaps = 96/692 (13%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
+T N +++ + + G L+ A LF++MP +++F+ NT+I G ++S N+ A+ +FD M
Sbjct: 100 NTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMF 159
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVNCQRMDLAE 134
R VTW +I GY N EA +F HG+ D VS ++ ++
Sbjct: 160 QRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGID-PDHVSLATLLSGFTEFDSVNEVR 218
Query: 135 SYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
+ S ++ N L+ + + A +LF+ +P +D +N ++ GY G
Sbjct: 219 QVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEG 278
Query: 191 CVGVAEDLFQKMHD-------------------RDLTSWKQLINGLV------------- 218
A +LF KM + D + Q ++G V
Sbjct: 279 FNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVAN 338
Query: 219 -------NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEK-------- 263
R+ A F +MPE ++N +++ NG VKE+ ++
Sbjct: 339 ALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDR 398
Query: 264 --YPYSNIASW-----------------------TNVIVG------YFEMGEVGSAIKVF 292
+P++ + S + ++VG Y + GE G A ++F
Sbjct: 399 RNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIF 458
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ + W MI + L E+GLK FV+M+ + D AT+ S++ C+ L +L
Sbjct: 459 SDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLT 518
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
LG+Q+H+ I +A++ MYA+CG+I+ AL F +P+ + +SWN++I A
Sbjct: 519 LGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYA 578
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
+G + L LFE M + +PD ++ + +L ACS+ GLV++G YFD M Y L P+
Sbjct: 579 QNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKK 638
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
HY +D+L R G DEA L+ ++ + E+ +W ++L +C IH N ++ + A +
Sbjct: 639 EHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEI---MWSSVLNSCGIHKNQELAKKAANQ 695
Query: 533 VMELEP-NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
+ ++ ++ Y+ ++ +Y + G ++ ++ M+E GVKK P SW++I HVF
Sbjct: 696 LFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFT 755
Query: 592 SGDSSHPKFHRLRYLLNLLHTEIEREILFDAY 623
+ D +HP+ + L+ E+E +++ Y
Sbjct: 756 ANDKTHPQMREIMKKLD----ELEEKMVKKGY 783
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 168/381 (44%), Gaps = 43/381 (11%)
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
+DA+I P T N ++ ++ G + A ++ P+ NI S +I+GY +
Sbjct: 88 VDASIIKTGFNPNTYRS--NFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKS 145
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G + A +F+ M R W ++I G +N+ E F++M G PD+ + ++L
Sbjct: 146 GNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLL 205
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
+ ++ +++ RQ+H+ IK+ + VSN+++ Y + ++ A F+ +P D +
Sbjct: 206 SGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSV 265
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC----------SYAGLV 452
++N+++ G + G+ +A+ LF +M+ ++P + TF +L+A G V
Sbjct: 266 TFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFV 325
Query: 453 DQGRYYFDCMKNKYFLQPRSAH--------------------YTCVVDLLGRFGLIDEAM 492
+ + ++ L S H Y +V G + E++
Sbjct: 326 VKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESL 385
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE------IAGERVMELEPNNSGVYLI 546
L E++ G + + LL I N+ +G I + + E+ NS
Sbjct: 386 ELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNS----- 440
Query: 547 LTEMYLSCGRREDAKRIFAQM 567
L +MY CG +A RIF+ +
Sbjct: 441 LVDMYAKCGEFGEANRIFSDL 461
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/514 (33%), Positives = 267/514 (51%), Gaps = 19/514 (3%)
Query: 102 ALRVFHGMP--LKDVVSWNLVIGALVNCQRMDLAESYFKEM------GARDVASWTIMVN 153
+L++ P L + L + L +C M + Y ++ D I
Sbjct: 3 SLQLLQASPPSLSSAKAHKLPLYGLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFC 62
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQL 213
+ + G + A ++FDK+P D +N + GYL ++ +M + ++ K
Sbjct: 63 AISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFT 122
Query: 214 INGLVNSRRIDAAISYFKQMPETCEK--------TWNSIISVLIRNGLVKEAHSYLEKYP 265
L+ + ID AI KQ+ K + N++I + + +++A + P
Sbjct: 123 YPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMP 182
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
++ SWT++I GY + G V A +VFELM R+ WN MI +++ E F +
Sbjct: 183 QRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDR 242
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ D S+L+ C+ L L+ G+ IH K + ++ +I MY +CG
Sbjct: 243 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGC 302
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
++ A F+ +P I SWN +I GLA HG E A+ELF+ M PD ITFV VLSA
Sbjct: 303 LEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSA 362
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
C+++GLV++G++YF M L+P H+ C+VDLLGR GL++EA L+NE+ +
Sbjct: 363 CAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMP---VNP 419
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
V GAL+GACRIH N ++GE G++V+ELEP+NSG Y++L +Y S GR ED ++
Sbjct: 420 DAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRK 479
Query: 566 QMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
M + GVKK PG S I+ G F++G +HP+
Sbjct: 480 LMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQ 513
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 171/416 (41%), Gaps = 84/416 (20%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----------- 50
++ + A +FDK+P D +N + RGY + N + ++++M +
Sbjct: 66 KSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPP 125
Query: 51 ----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
D F+ N +I + +++ A+ VFD M RD
Sbjct: 126 LIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRD 185
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
VV+W S+I+GY G +D+A VF MP ++ VSWN +I A V R+ A + F M
Sbjct: 186 VVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRL 245
Query: 143 RDV-------ASWTIMVNGL--VREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCV 192
+V AS GL + +G+ + +K + D + +I Y GC+
Sbjct: 246 ENVVLDKFVAASMLSACTGLGALEQGKWIHG--YIEKSGIELDSKLATTVIDMYCKCGCL 303
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVL 248
A ++F ++ + ++SW +I GL + +AAI FK+M T+ +++S
Sbjct: 304 EKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSAC 363
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+GLV+E Y + M EV L + + M+
Sbjct: 364 AHSGLVEEGKHYFQY------------------MTEV--------LGLKPGMEHFGCMVD 397
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
LG L EE K +M +PD +++ C +LG QI + I++
Sbjct: 398 LLGRAGLLEEARKLINEMP---VNPDAGVLGALVGACRIHGNTELGEQIGKKVIEL 450
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 170/382 (44%), Gaps = 30/382 (7%)
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
+ +S ++ A EVFD + D +N++ GY+ L + ++ M K V
Sbjct: 63 AISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFT 122
Query: 121 IGALVNCQRMDLAESYFKEMGAR--------DVASWTIMVNGLVREGRIVEARKLFDKMP 172
L+ +D A K++ A D S +++ V + +AR++FD MP
Sbjct: 123 YPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMP 182
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+DV +W +I GY G V A ++F+ M +R+ SW +I V S R+ A + F +
Sbjct: 183 QRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDR 242
Query: 233 MP---ETCEK-TWNSIISVLIRNGLVKEA---HSYLEKYPY---SNIASWTNVIVGYFEM 282
M +K S++S G +++ H Y+EK S +A T VI Y +
Sbjct: 243 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLA--TTVIDMYCKC 300
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G + A +VF + + ++ WN MI GL + GE ++ F +M+ +PD TF +VL
Sbjct: 301 GCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVL 360
Query: 343 TICSDLPTLDLGRQ-----IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+ C+ ++ G+ +K F M+ + R G ++ A + +P
Sbjct: 361 SACAHSGLVEEGKHYFQYMTEVLGLKPGMEHF----GCMVDLLGRAGLLEEARKLINEMP 416
Query: 398 IH-DIISWNSIICGLAYHGYAE 418
++ D +++ HG E
Sbjct: 417 VNPDAGVLGALVGACRIHGNTE 438
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/555 (30%), Positives = 286/555 (51%), Gaps = 40/555 (7%)
Query: 74 VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD-VVSWNLVIGALVNCQRM-D 131
VF +E V+ W S+I + L AL F M N+ L +C M D
Sbjct: 61 VFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMD 120
Query: 132 L-----AESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
L + +G D+ + ++N + I RK+F+ MP KDV ++N +IAG
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAG 180
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
Y +G A + ++M DL ++ + + + F + + +
Sbjct: 181 YAQSGMYEDALRMVREMGTSDLKP---------DAFTLSSVLPIFSEYVDVLKG------ 225
Query: 246 SVLIRNGLVKEAHSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
KE H Y + K S++ ++++ Y + + + +VF + RD WN
Sbjct: 226 ---------KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWN 276
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK- 363
++ G +N E L+ F QM + P F+SV+ C+ L TL LG+Q+H ++
Sbjct: 277 SLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG 336
Query: 364 -IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
RN F +++A++ MY++CGNIQ+A F + +HD +SW +II G A HG+ +A+
Sbjct: 337 GFGRNIF--IASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVS 394
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
LFE M+ KP+ + FV VL+ACS+ GLVD+ YF+ M Y L HY V DLL
Sbjct: 395 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 454
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
GR G ++EA + ++++R +E + +VW LL +C +H N+++ E E++ ++ N G
Sbjct: 455 GRAGKLEEAYDFISKMR---VEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMG 511
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHR 602
Y+++ MY S GR ++ ++ ++++ G++K+P CSWI++ + H F+SGD SHP R
Sbjct: 512 AYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDR 571
Query: 603 LRYLLNLLHTEIERE 617
+ L + ++E+E
Sbjct: 572 INEFLKAVMEQMEKE 586
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 176/402 (43%), Gaps = 49/402 (12%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D++T N ++ + + ++VF+ M +DVV++N++I+GY +G+ ++ALR+ M
Sbjct: 139 DLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMG 198
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTI-------------MVNGLVR 157
D+ + ++ + + Y + +++ + I +V+ +
Sbjct: 199 TSDLKPDAFTLSSV-----LPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK 253
Query: 158 EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL 217
RI ++ ++F + +D +WN ++AGY+ NG A LF++M
Sbjct: 254 SARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQM--------------- 298
Query: 218 VNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVI 276
V+++ A+++ +P L L K+ H Y+ + + NI + ++
Sbjct: 299 VSAKVRPGAVAFSSVIPACAH---------LATLHLGKQLHGYVLRGGFGRNIFIASALV 349
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G + +A K+F+ M D W +I G + G E + F +MK G P+
Sbjct: 350 DMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQV 409
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKI-ARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
F +VLT CS + +D K+ NQ A+ + R G ++ A S
Sbjct: 410 AFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISK 469
Query: 396 VPIHDIIS-WNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
+ + S W++++ + H K LEL E++ F D
Sbjct: 470 MRVEPTGSVWSTLLSSCSVH----KNLELAEKVAEKIFTIDS 507
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 151/364 (41%), Gaps = 38/364 (10%)
Query: 242 NSIISVLIRN-------GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFEL 294
++I LI+N K+ H+ + + S + VI Y + + A+ VF+
Sbjct: 5 KALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLVFKT 64
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+ + V W +I + L L FV+M+ SG PD+ F SVL C+ + L G
Sbjct: 65 LESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFG 124
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
+H +++ + NA++ MY++ I S F +P D++S+N++I G A
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQS 184
Query: 415 GYAEKALELFERMRLTDFKPDDIT----------FVGVLSACSYAGLV-----DQGRYYF 459
G E AL + M +D KPD T +V VL G V D Y
Sbjct: 185 GMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIG 244
Query: 460 DCMKNKYFLQPR---------------SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
+ + Y R S + +V + G +EA+ L ++ + +
Sbjct: 245 SSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVR 304
Query: 505 VSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI 563
+ +++ AC + +G ++ G + N + L +MY CG + A++I
Sbjct: 305 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKI 364
Query: 564 FAQM 567
F +M
Sbjct: 365 FDRM 368
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 160/351 (45%), Gaps = 57/351 (16%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTV--- 58
I + +F+ MP++D V++N +I GY ++G ++A+ + +M D+ FT ++V
Sbjct: 156 IDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPI 215
Query: 59 ------------IAGLM--------------------QSDNVQGAKEVFDGMEVRDVVTW 86
I G + +S ++ ++ VF + RD ++W
Sbjct: 216 FSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISW 275
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAES---YFKE 139
NS+++GYV NG +EALR+F M V V+++ VI A + + L + Y
Sbjct: 276 NSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 335
Query: 140 MG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
G R++ + +V+ + G I ARK+FD+M D +W +I G+ +G A L
Sbjct: 336 GGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSL 395
Query: 199 FQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMPETCE-----KTWNSIISVLI 249
F++M + + ++ ++ + +D A YF M + + + ++ +L
Sbjct: 396 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 455
Query: 250 RNGLVKEAHSYLEKYPYSNIAS-WTNVIVGYFEMGEVGSAIKVFELMTTRD 299
R G ++EA+ ++ K S W+ ++ + A KV E + T D
Sbjct: 456 RAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTID 506
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 115/250 (46%), Gaps = 49/250 (19%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE------------ 49
++ARI++++ +F + +RD+++WN ++ GY +NG + A+ LF QM
Sbjct: 253 KSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSS 312
Query: 50 ---------------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
R++F + ++ + N+Q A+++FD M + D
Sbjct: 313 VIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHD 372
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFK 138
V+W ++I G+ +G EA+ +F M + V V++ V+ A + +D A YF
Sbjct: 373 EVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFN 432
Query: 139 EMGA-----RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV-QAWNLMIAGYLDNGCV 192
M +++ + + + L R G++ EA KM + W+ +++ + +
Sbjct: 433 SMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNL 492
Query: 193 GVAEDLFQKM 202
+AE + +K+
Sbjct: 493 ELAEKVAEKI 502
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 205/692 (29%), Positives = 331/692 (47%), Gaps = 92/692 (13%)
Query: 8 EAQN-LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS- 65
EA N LF ++ ++ +W +I + GF A+ F +M E + N V+ ++++
Sbjct: 64 EASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKAC 123
Query: 66 ---DNVQGAKEVFD---------------------GMEVRDVVTWNSMISGYVCNGLIDE 101
+ ++ K V GM R+ V WNSMI GYV NGL +E
Sbjct: 124 GGLEWIRIGKVVHGLVSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEE 183
Query: 102 ALRVFHGM----------PLKDVVSWNLVIGALVNC-QRMDLAESYFKEMGARDVASWTI 150
A+ VF+ M L +S + +GAL + Q +A EM +S
Sbjct: 184 AIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSS--- 240
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDL--- 207
++N + G I +A +F +M KDV WNL+I+GY+ G V A ++ M +L
Sbjct: 241 LINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFD 300
Query: 208 -TSWKQLINGLVNSRRID------------------AAISYFKQMPETCEKT-------- 240
+ L++ + R + +S M CEK
Sbjct: 301 SVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFN 360
Query: 241 ---------WNSIISVLIRNGLVKEA-----HSYLEKYPYSNIASWTNVIVGYFEMGEVG 286
WN++++ G EA LE P N+ SW ++I+G+ G+V
Sbjct: 361 SSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVP-PNVISWNSLILGFLNSGQVN 419
Query: 287 SAIKVFELMTTRDV----TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
A +F M + V W +I GL + G E + F +M+E+G P+ + VL
Sbjct: 420 EAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVL 479
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
C +L +L +GR +H I+ + ++ +++ MYA+CG+ A F +P ++
Sbjct: 480 LACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELP 539
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
+N++I G A HG A +AL L+ ++ KPD+ITF L ACS+A +V +G F M
Sbjct: 540 IYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFVDM 599
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
+ + + P HY C+V LL R G +DEA L I A + + G+LL ACR HN
Sbjct: 600 VSNHNINPSIEHYGCMVSLLSRCGDLDEAFGL---ISAMPYKPDVQILGSLLAACREHNK 656
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
I++ E ++++L+P+NSG Y+ ++ Y + GR ++ K++ MKE G++K PGCSWIQ
Sbjct: 657 IELEEYLSNQLLKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGCSWIQ 716
Query: 583 INDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
+ + +VF++GD SHP+ + L LL EI
Sbjct: 717 VGEELNVFVAGDKSHPETEEIYTTLALLLMEI 748
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/516 (23%), Positives = 231/516 (44%), Gaps = 59/516 (11%)
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
+ DN + + +F + +++V +W ++I G EAL F M ++ N V+
Sbjct: 59 KCDNPEASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVL-- 116
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRI------VEARKLFDKMPAKDVQ 177
+ K G + +V+GLV G + +K MP ++
Sbjct: 117 ----------PNVLKACGGLEWIRIGKVVHGLVSCGYVWKMWGGGGCKKGVCGMPQRNAV 166
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ---MP 234
AWN MI GY+ NG A ++F +M + + + ++ +++ A+ KQ +
Sbjct: 167 AWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIA 226
Query: 235 ETC--EKTWN---SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
C E T N S+I+ + GL+++A S + ++ +W +I GY ++GEV A+
Sbjct: 227 VICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKAL 286
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
+ LM E L+F D+ T ++++ +D+
Sbjct: 287 NMCHLMRL--------------------ENLRF-----------DSVTLATLMSAFADMR 315
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
L LG++ H I+ V ++++ MYA+C I A F+S D+I WN+++
Sbjct: 316 NLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLA 375
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
A G++ +AL LF +M+L P+ I++ ++ +G V++ + F M++ +Q
Sbjct: 376 AFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQMQS-LGVQ 434
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE-I 528
P +T ++ L R G EA+ ++ G++ + +L AC ++++G +
Sbjct: 435 PNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQIGRAL 494
Query: 529 AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
G + + + L +MY CG R+ AKR+F
Sbjct: 495 HGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVF 530
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/510 (22%), Positives = 219/510 (42%), Gaps = 106/510 (20%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I++A+++F +M ++D VTWN++I GY + G +D A+ + + M ++ + +A LM +
Sbjct: 251 IEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSA 310
Query: 66 ---------------------------------------DNVQGAKEVFDGMEVRDVVTW 86
+ + A+ VF+ +D++ W
Sbjct: 311 FADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILW 370
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
N+M++ + G EAL +F+ M L+ +V+SWN +I +N +++ A+ F +M +
Sbjct: 371 NTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQMQS 430
Query: 143 RDV----ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
V +WT +++GL R G EA F +M V+ + I G L C+ +A
Sbjct: 431 LGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLL-ACINLA--- 486
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
S +I A+ + LIR+ L
Sbjct: 487 ---------------------SLQIGRALHGY-----------------LIRHSL----- 503
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
Y +I T+++ Y + G+ A +VF+++ +++ ++N MI G + E
Sbjct: 504 -------YLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMISGFALHGQAVE 556
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR-NQFTTVSNAMI 377
L + +KE G PDN TFT+ L CS + G ++ + N M+
Sbjct: 557 ALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFVDMVSNHNINPSIEHYGCMV 616
Query: 378 TMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
++ +RCG++ A S++P D+ S++ H E LE + +L +PD+
Sbjct: 617 SLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHNKIE--LEEYLSNQLLKLQPDN 674
Query: 437 I-TFVGVLSACSYAGLVDQGRYYFDCMKNK 465
+V + +A + AG D+ + MK +
Sbjct: 675 SGNYVAMSNAYAAAGRWDEVKKVRQLMKER 704
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 29/260 (11%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIK----IARNQFTTVSNAMITMYARCGNIQSALLE 392
+ +L C L GRQIHAQ +K A N++ + ++ YA+C N +++
Sbjct: 12 VYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEY--IETKLVIFYAKCDNPEASNSL 69
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F V + ++ SW ++I G+ ++AL F+ M+ PD+ VL AC +
Sbjct: 70 FRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWI 129
Query: 453 DQGRYYFDCMKNKY----------------FLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
G+ + Y Q + + ++ + GL +EA+ +
Sbjct: 130 RIGKVVHGLVSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFY 189
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGE----IAGERVMELEPNNSGVYLILTEMYL 552
E+R +G+E + + L A ++ G+ IA +E+ N G LI Y
Sbjct: 190 EMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEM-TTNLGSSLI--NFYS 246
Query: 553 SCGRREDAKRIFAQMKENGV 572
G EDA+ +F++M E V
Sbjct: 247 KVGLIEDAESVFSRMLEKDV 266
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 174/553 (31%), Positives = 285/553 (51%), Gaps = 31/553 (5%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN-LVIGALVNC-Q 128
A+ VFD R W ISG G + +R F M + + N V+ A+V C
Sbjct: 64 ARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCA 123
Query: 129 RMDLAESYFKEMG-------ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
M ES + G DV +++ + G+ AR++F M +D +WN+
Sbjct: 124 GMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNI 183
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET----- 236
I + +G + + LF + RD TSW +I+GL+ S A+S+ ++M +
Sbjct: 184 AIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFN 243
Query: 237 --CEKTWNSIISVLIRNGLVKEAH-----SYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
T + +L+ L ++ H + LE + ++++ Y + G + +A
Sbjct: 244 HYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVR----SSLMDMYCKCGLLEAAA 299
Query: 290 KVFELMT--TRDVT-VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
VF+ + TRD+ W+ M+ G +N EE L F +M G + D T TSV C+
Sbjct: 300 SVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACA 359
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
++ ++ GRQ+H K+ +++A++ MYA+CGN++ A F +I W S
Sbjct: 360 NVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTS 419
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
++C A HG A+ELFERM P++IT VGVLSACS+ GLV +G YF M+ +Y
Sbjct: 420 MLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEY 479
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
+ P HY C+VDL GR GL+D+A N + E + I VW LL ACR+H + +
Sbjct: 480 GIVPSIEHYNCIVDLYGRSGLLDKAKNFIEE---NNINHEAIVWKTLLSACRLHQHNEYA 536
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
++A E++++LE ++G Y++L+ +Y + + D + M+E V+K+PG SWI + +
Sbjct: 537 KLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNT 596
Query: 587 GHVFLSGDSSHPK 599
H F++GD+SHP+
Sbjct: 597 VHTFVAGDASHPQ 609
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 205/491 (41%), Gaps = 67/491 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNT-VI 59
+R R +A+ +FD+ P R W + I G + G + M F +M T N V+
Sbjct: 56 VRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVL 115
Query: 60 AGLMQS----DNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
A +++ +V+ K V +G+ + DVV N+++ Y G + A RVF M
Sbjct: 116 AAVVRCCAGMGDVESGKRVHGWMLRNGVHL-DVVLCNAVLDMYAKCGQFERARRVFGAMA 174
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
+D VSWN+ IGA + + + F E RD SW +++GL+R G +A +
Sbjct: 175 ERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRR 234
Query: 171 MPAKDV------QAWNLMIAG---------------------------------YLDNGC 191
M V + ++AG Y G
Sbjct: 235 MAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGL 294
Query: 192 VGVAEDLFQKMH--DRDLT-SWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSI 244
+ A +F RD+ +W ++ G V + R + A+ F++M T S+
Sbjct: 295 LEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSV 354
Query: 245 ISVLIRNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDV 300
+ G+V ++ H +EK Y A + IV Y + G + A +F+ T+++
Sbjct: 355 AAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNI 414
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
VW M+ + G ++ F +M +P+ T VL+ CS + + G +++ +
Sbjct: 415 AVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEG-ELYFK 473
Query: 361 AIKIARNQFTTVS--NAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHGY 416
++ ++ N ++ +Y R G + A +E +++ H+ I W +++ H +
Sbjct: 474 QMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNIN-HEAIVWKTLLSACRLHQH 532
Query: 417 AEKALELFERM 427
E A E++
Sbjct: 533 NEYAKLASEKL 543
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 180/653 (27%), Positives = 313/653 (47%), Gaps = 76/653 (11%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM----- 63
A+ +FD MP+R+ V W +I Y + G + A LF++M + + + + L+
Sbjct: 115 ARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSE 174
Query: 64 -------------------------------QSDNVQGAKEVFDGMEVRDVVTWNSMISG 92
+ N++ ++++FD M+ RD+V+WNS+IS
Sbjct: 175 LAHVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISA 234
Query: 93 YVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV 152
Y G I E L + M L+ + G++++ AS +
Sbjct: 235 YAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSV-----------------AASRGELK 277
Query: 153 NGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
G G+I+ A D +I YL G + +A +F++ D+D+ W
Sbjct: 278 LGRCLHGQILRAGFYLD------AHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTA 331
Query: 213 LINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVLIRNGLVKEAHSYL----- 261
+I+GLV + D A++ F+QM P T T S+I+ + G S L
Sbjct: 332 MISGLVQNGSADKALAVFRQMLKFGVKPST--ATMASVITACAQLGSYNLGTSILGYILR 389
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
++ P ++A+ +++ Y + G + + VF++M RD+ WN M+ G +N E L
Sbjct: 390 QELPL-DVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALF 448
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F +M+ +PD+ T S+L C+ L LG+ IH+ I+ V +++ MY
Sbjct: 449 LFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYC 508
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CG++ +A F+ +P HD++SW++II G YHG E AL + + + KP+ + F+
Sbjct: 509 KCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLS 568
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRAD 501
VLS+CS+ GLV+QG ++ M + + P H+ CVVDLL R G ++EA N+ + D
Sbjct: 569 VLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKKKFPD 628
Query: 502 GIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAK 561
+ V G +L ACR + N ++G+ ++ L P ++G ++ L Y S + E+
Sbjct: 629 PVL---DVLGIILDACRANGNNELGDTIANDILMLRPMDAGNFVQLAHCYASINKWEEVG 685
Query: 562 RIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
+ M+ G+KK PG S+I I+ F + +SHP+F + L +L E+
Sbjct: 686 EAWTYMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEIVCTLKILRKEM 738
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 142/510 (27%), Positives = 234/510 (45%), Gaps = 33/510 (6%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
D +S+I+ Y G D A +VF MP ++VV W +IG R+ A S F EM
Sbjct: 95 DAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMR 154
Query: 142 ARDVASWTIMVNGL---VREGRIVEARK----LFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ + ++ V L V E V+ L+ M D+ N M+ Y G +
Sbjct: 155 RQGIQPSSVTVLSLLFGVSELAHVQCLHGCAILYGFM--SDINLSNSMLNVYGKCGNIEY 212
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIR 250
+ LF M RDL SW LI+ I + K M E +T+ S++SV
Sbjct: 213 SRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAAS 272
Query: 251 NGLVKEAH----SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVM 306
G +K L Y + T++IV Y + G++ A ++FE + +DV +W M
Sbjct: 273 RGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAM 332
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
I GL +N ++ L F QM + G P AT SV+T C+ L + +LG I ++
Sbjct: 333 ISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQEL 392
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
N+++TMYA+CG++ + + F + D++SWN+++ G A +GY +AL LF
Sbjct: 393 PLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNE 452
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD-CMKNKYFLQPRSAHYTCVVDLLGRF 485
MR + PD IT V +L C+ G + G++ ++N L+P T +VD+ +
Sbjct: 453 MRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNG--LRPCILVDTSLVDMYCKC 510
Query: 486 GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEPNNSGV 543
G +D A N++ + + W A++ H + + +E ++PN
Sbjct: 511 GDLDTAQRCFNQMPSHDL----VSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPN---- 562
Query: 544 YLILTEMYLSC---GRREDAKRIFAQMKEN 570
++I + SC G E I+ M ++
Sbjct: 563 HVIFLSVLSSCSHNGLVEQGLNIYESMTKD 592
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 170/385 (44%), Gaps = 30/385 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
I+ ++ LFD M RD V+WN +I Y + G + + L M E T+ +V++
Sbjct: 210 IEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSV 269
Query: 62 LMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
++ + G +R D S+I Y+ G ID A R+F KDVV
Sbjct: 270 AASRGELKLGR-CLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVL 328
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE---------GRIVEARKL 167
W +I LV D A + F++M V T + ++ G + L
Sbjct: 329 WTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYIL 388
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
++P DV N ++ Y G + + +F M+ RDL SW ++ G + + A+
Sbjct: 389 RQELPL-DVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEAL 447
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS---------NIASWTNVIVG 278
F +M + +T +SI V + G +L K+ +S I T+++
Sbjct: 448 FLFNEM-RSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDM 506
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G++ +A + F M + D+ W+ +I G G + GE L+F+ + ESG P++ F
Sbjct: 507 YCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIF 566
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIK 363
SVL+ CS ++ G I+ K
Sbjct: 567 LSVLSSCSHNGLVEQGLNIYESMTK 591
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 143/322 (44%), Gaps = 57/322 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER---- 50
++ +I A +F++ +D V W MI G +NG D A+ +F QM P
Sbjct: 306 LKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMA 365
Query: 51 -----------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
D+ T N+++ + ++ + VFD M R
Sbjct: 366 SVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRR 425
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV----NCQRMDLAE--- 134
D+V+WN+M++GY NG + EAL +F+ M + ++ I +L+ + ++ L +
Sbjct: 426 DLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIH 485
Query: 135 SYFKEMGARD-VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
S+ G R + T +V+ + G + A++ F++MP+ D+ +W+ +I GY +G
Sbjct: 486 SFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGE 545
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN---------SI 244
A + K + + + +++S + + + E+ K + +
Sbjct: 546 AALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACV 605
Query: 245 ISVLIRNGLVKEAHS-YLEKYP 265
+ +L R G V+EA++ Y +K+P
Sbjct: 606 VDLLSRAGRVEEAYNVYKKKFP 627
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 114/291 (39%), Gaps = 48/291 (16%)
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
L + M ++ D TF S+L CS L LG +H + + + +++++I
Sbjct: 46 LATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINF 105
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
YA+ G A F +P +++ W +II + G +A LF+ MR +P +T
Sbjct: 106 YAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTV 165
Query: 440 VGVLSACS--------------------------------YAGLVDQGRYYFDCMKNKYF 467
+ +L S G ++ R FD M ++
Sbjct: 166 LSLLFGVSELAHVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDL 225
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
+ + ++ + G I E + LL +R G E P +G++L +K+G
Sbjct: 226 VS-----WNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGR 280
Query: 528 IAGERVMELEPNNSGVYL------ILTEMYLSCGRREDAKRIFAQMKENGV 572
+++ +G YL L +YL G+ + A R+F + + V
Sbjct: 281 CLHGQILR-----AGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDV 326
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 181/619 (29%), Positives = 303/619 (48%), Gaps = 37/619 (5%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVIAG 61
+ A+ LF +P+ D +NV++RG+ N +++ L+ + D FTY +A
Sbjct: 61 RHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAA 120
Query: 62 LMQSDNVQ--GAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
++ A + DG +V ++++ Y + A +VF GMP +D V WN
Sbjct: 121 CSNDKHLMLLHAHSIIDGYG-SNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNT 179
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
+I LV D + F+EM A V + V ++ ++ K+ +Q
Sbjct: 180 MINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKV-----GMGIQCL 234
Query: 180 NL-------------MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
L +I+ Y G V A LF++++ DL ++ +I+G + + +
Sbjct: 235 ALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECS 294
Query: 227 ISYFKQMPETCEKTWNSIISVLI-------RNGLVKEAHSYLEKYPYS-NIASWTNVIVG 278
+ F+++ + E+ +S I LI L H + K N T
Sbjct: 295 VKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAI 354
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y ++ E+ A +F+ + V WN MI G +N E + F +M ++ +P+ T
Sbjct: 355 YNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTI 414
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
T++L+ C+ L +L G+ +H VS A++ MYA+CGNI A F S+
Sbjct: 415 TTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSE 474
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
+ ++WN++I G HGY +AL+L+ M + P +TF+ VL ACS+AGLV +G
Sbjct: 475 KNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEI 534
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F M NKY ++P HY C+VD+LGR G +++A+ + ++ +E P VWG LLGAC
Sbjct: 535 FHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMP---VEPGPAVWGTLLGACM 591
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
IH + + +A ER+ EL+P + G Y++L+ +Y A I +K+ + K PGC
Sbjct: 592 IHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGC 651
Query: 579 SWIQINDGGHVFLSGDSSH 597
+ I++N HVF+SGD SH
Sbjct: 652 TLIEVNGTPHVFVSGDRSH 670
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 206/493 (41%), Gaps = 80/493 (16%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----------- 52
+R+ A+ +FD MP+RDTV WN MI G KN D+++ LF +M +
Sbjct: 157 SRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVL 216
Query: 53 -----------------------FTY-NTVIAGLM----QSDNVQGAKEVFDGMEVRDVV 84
F + + V+ GL+ + +V A+ +F + D++
Sbjct: 217 PAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLI 276
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLK-DVVSWNLVIGAL----------VNCQRMDLA 133
+N+MISG+ NG + ++++F + + VS + ++G + + C
Sbjct: 277 AYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFC 336
Query: 134 ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+ ++T + N L I AR LFD+ P K V AWN MI+GY NG
Sbjct: 337 VKSGIILNPTVSTAFTAIYNKL---NEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTE 393
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A LF++M + T N+ I +S Q+ W + LI++
Sbjct: 394 TAISLFKEMMKTEFTP---------NAVTITTILSACAQLGSLSFGKW---VHHLIKSEN 441
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
++ NI T ++ Y + G + A ++F+ M+ ++ WN MIFG G +
Sbjct: 442 LEP-----------NIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLH 490
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI-HAQAIKIARNQFTTV 372
G E LK + +M G +P TF SVL CS + G +I H K
Sbjct: 491 GYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEH 550
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELFERMRLTD 431
M+ + R G ++ AL +P+ + W +++ H + A E RL +
Sbjct: 551 YACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASE--RLFE 608
Query: 432 FKPDDITFVGVLS 444
P + + +LS
Sbjct: 609 LDPGSVGYYVLLS 621
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 250/458 (54%), Gaps = 9/458 (1%)
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM-----HDRDLTSWKQLINGLV 218
AR +FD P WN MI Y + A +++ M +RD+ L++
Sbjct: 102 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYS 161
Query: 219 NSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+ A F +MP+ WN++I+ L ++ A ++ + SW ++ G
Sbjct: 162 KMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAG 221
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y G +++F+ M +VT WNV+I +N +E + F QM+ P++ TF
Sbjct: 222 YAHNGCFVEVLELFDKMKLGNVT-WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 280
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
SVL + L G HA I++ T V N++I MYA+CG + + F+ +
Sbjct: 281 VSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDH 340
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
D +SWN+++ G A HG+ ++A+ LF M+ + + D ++FV VLSAC +AGLV++GR
Sbjct: 341 KDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKI 400
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F M +KY ++P HY C+VDLLGR GL DE + I+ +E VWGALLG+CR
Sbjct: 401 FHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGF---IKVMPVEPDAGVWGALLGSCR 457
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
+H+N+K+GE+A + +++LEP N +++L+ +Y GR DA + ++M + G+KK PGC
Sbjct: 458 MHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGC 517
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
SW+++ + H F GD SHP+ + L N L ++E+
Sbjct: 518 SWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEK 555
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 174/394 (44%), Gaps = 26/394 (6%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA-LVNCQR 129
A+ VFD + WNSMI Y + +EAL +++ M K + ++ IGA LV+
Sbjct: 102 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYS 161
Query: 130 ----MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAG 185
+ A F +M RDV +W M+ GL + AR++FD+M +D +W M+AG
Sbjct: 162 KMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAG 221
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWNSI 244
Y NGC +LF KM ++T W +I + + AIS F QM E +
Sbjct: 222 YAHNGCFVEVLELFDKMKLGNVT-WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 280
Query: 245 ISVL--------IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
+SVL R G+ A ++ SN ++I Y + G++ + K+F M
Sbjct: 281 VSVLPAAAYLAAFREGMAFHA-CIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMD 339
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+D WN M+ G + G+ + F M+ES D+ +F SVL+ C ++ GR+
Sbjct: 340 HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRK 399
Query: 357 I-HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYH 414
I H+ + K M+ + R G L +P+ D W +++ H
Sbjct: 400 IFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMH 459
Query: 415 G---YAEKALELFERMRLTDFKPDDITFVGVLSA 445
E AL+ L +P + VLS+
Sbjct: 460 SNVKLGEVALD-----HLVKLEPRNPAHFVVLSS 488
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 162/381 (42%), Gaps = 58/381 (15%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKN---------------------------------- 34
A+++FD P + WN MIR Y ++
Sbjct: 102 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYS 161
Query: 35 --GFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISG 92
G L A +F++MP+RD+ +N +IAGL QS++ A+ VFD M +D V+W +M++G
Sbjct: 162 KMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAG 221
Query: 93 YVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV 152
Y NG E L +F M L + V+WN++I A + A S F +M + ++
Sbjct: 222 YAHNGCFVEVLELFDKMKLGN-VTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTF 280
Query: 153 NGLVREGRIVEARKLFDKMPAKDVQ--------AWNLMIAGYLDNGCVGVAEDLFQKMHD 204
++ + A + A +Q N +I Y G + +E LF +M
Sbjct: 281 VSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDH 340
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEA--- 257
+D SW +++G D AI+ F M E+ + ++ S++S GLV+E
Sbjct: 341 KDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKI 400
Query: 258 -HSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGEND 314
HS +KY ++ + ++ G + ++M D VW ++ +
Sbjct: 401 FHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHS 460
Query: 315 ---LGEEGLKFFVQMKESGPS 332
LGE L V+++ P+
Sbjct: 461 NVKLGEVALDHLVKLEPRNPA 481
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 127/289 (43%), Gaps = 50/289 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ A+ +FDKMP+RD V WN MI G ++ A +F+QM ++D ++ T++AG +
Sbjct: 166 LKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHN 225
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD------------ 113
E+FD M++ + VTWN +I+ Y+ NG EA+ FH M L++
Sbjct: 226 GCFVEVLELFDKMKLGN-VTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVL 284
Query: 114 -----------------------VVSWNLVIGALVN----CQRMDLAESYFKEMGARDVA 146
+S LV +L++ C ++D +E F EM +D
Sbjct: 285 PAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTV 344
Query: 147 SWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLD----NGCVGVAEDLFQKM 202
SW M++G G A LF M VQ ++ L G V +F M
Sbjct: 345 SWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSM 404
Query: 203 HDR-----DLTSWKQLINGLVNSRRIDAAISYFKQMP-ETCEKTWNSII 245
D+ DL + +++ L + D + + K MP E W +++
Sbjct: 405 SDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 453
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 135/333 (40%), Gaps = 43/333 (12%)
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
S T++I Y + A VF+ +WN MI + E L+ + M E G
Sbjct: 85 SITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKG 144
Query: 331 P-SPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--------------------IARNQF 369
D ++ + S + L R++ + K +AR F
Sbjct: 145 GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVF 204
Query: 370 TTVSN-------AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
+ + M+ YA G L F + + + ++WN II +G+A++A+
Sbjct: 205 DQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN-VTWNVIIAAYMQNGHAKEAIS 263
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
F +MRL +F P+ +TFV VL A +Y +G + C+ FL + ++D+
Sbjct: 264 SFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLS-NTLVGNSLIDMY 322
Query: 483 GRFGLIDEAMNLLNEI-RADGIEVSPTVWGALLGACRIHNN----IKVGEIAGERVMELE 537
+ G +D + L NE+ D + W A+L +H + I + + E ++++
Sbjct: 323 AKCGQLDYSEKLFNEMDHKDTVS-----WNAMLSGYAVHGHGDRAIALFSLMQESQVQID 377
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
S ++ + G E+ ++IF M +
Sbjct: 378 ---SVSFVSVLSACRHAGLVEEGRKIFHSMSDK 407
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%), Gaps = 13/180 (7%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIA 60
++ ++ LF++M +DTV+WN M+ GY +G D A+ LF+ M E D ++ +V++
Sbjct: 327 QLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLS 386
Query: 61 GLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLK-DV 114
+ V+ +++F M + D+ + M+ GL DE L MP++ D
Sbjct: 387 ACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDA 446
Query: 115 VSWNLVIGAL---VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
W ++G+ N + ++A + ++ R+ A + ++ + + GR +A K KM
Sbjct: 447 GVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKM 506
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 147/427 (34%), Positives = 251/427 (58%), Gaps = 15/427 (3%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR-RIDAAISYFKQM----- 233
N +++ Y G + A LF +M +R++ +W ++ L N+ R + A+ + M
Sbjct: 119 NSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGV 178
Query: 234 -PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKV 291
P T++S++ G++ H+ K S++ +++I Y ++G++ +V
Sbjct: 179 APNA--YTFSSVLGACGTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRV 236
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F+ M TRD+ VWN +I G ++ G ++ F++MK++G S + T TSVL C+ + L
Sbjct: 237 FDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVML 296
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
+ GRQ+HA +K R+ + NA++ MY +CG+++ A F +P D+ISW+++I GL
Sbjct: 297 EAGRQVHAHVLKYERD--LILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGL 354
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
A +G + +AL +F+ M+ P+ IT VGVL ACS+AGLV+ G YYF MK + +QP
Sbjct: 355 AQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPE 414
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
H+ C+VDLLGR G +DEA+ + ++ +E +W LLGACR+H + + A
Sbjct: 415 REHHNCMVDLLGRAGKLDEAVEFIRDM---NLEPDAVIWRTLLGACRMHKSGNLAAYAAR 471
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
+++LEP++ G ++L+ Y + DA++ + M++ G+KKEPG SWI++ HVF+
Sbjct: 472 EILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFI 531
Query: 592 SGDSSHP 598
+GD SHP
Sbjct: 532 AGDLSHP 538
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 163/380 (42%), Gaps = 19/380 (5%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQ-RMDLAESYFKEMGARDV 145
NS++S Y GL+D+ALR+F MP ++VV+W V+ AL N R + A + M V
Sbjct: 119 NSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGV 178
Query: 146 A----SWTIMVNGLVREGRIVEARKLFDKMPA-KDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
A +++ ++ G + K+ DV + +I Y+ G + +F
Sbjct: 179 APNAYTFSSVLGACGTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFD 238
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR--NGLV---- 254
+M RDL W +I G S AI F +M + ++ ++R G+V
Sbjct: 239 EMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEA 298
Query: 255 -KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
++ H+++ KY I ++ Y + G + A +F M RDV W+ MI GL +N
Sbjct: 299 GRQVHAHVLKYERDLILH-NALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQN 357
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV- 372
E L+ F MK G +P+ T VL CS ++ G K+ Q
Sbjct: 358 GKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREH 417
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTD 431
N M+ + R G + A+ + + D + W +++ H L + +
Sbjct: 418 HNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGN--LAAYAAREILK 475
Query: 432 FKPDDITFVGVLSACSYAGL 451
+PDD VL + +YA L
Sbjct: 476 LEPDD-QGARVLLSNTYADL 494
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 148/325 (45%), Gaps = 57/325 (17%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ Y K G LD+A+ LF++MPE R+VV
Sbjct: 119 NSLVSMYAKFGLLDDALRLFDRMPE-------------------------------RNVV 147
Query: 85 TWNSMISGYV-CNGLIDEALRVFHGMPLKDVVSWNL-----VIGALVNCQRMDLAESYFK 138
TW ++++ +G +EALR M +D V+ N V+GA + +
Sbjct: 148 TWTTVVAALANADGRKEEALRFLVAM-WRDGVAPNAYTFSSVLGACGTPGVLAALHASTV 206
Query: 139 EMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
++G DV + +++ ++ G + R++FD+M +D+ WN +IAG+ +G A +
Sbjct: 207 KVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIE 266
Query: 198 LFQKMHDR-------DLTSWKQLINGLV---NSRRIDAAISYFKQMPETCEKTWNSIISV 247
LF +M D LTS + G+V R++ A + + E N+++ +
Sbjct: 267 LFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLKY----ERDLILHNALLDM 322
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV-- 305
+ G +++A + + P ++ SW+ +I G + G+ A++VF+LM + V +
Sbjct: 323 YCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITM 382
Query: 306 --MIFGLGENDLGEEGLKFFVQMKE 328
++F L E+G +F MK+
Sbjct: 383 VGVLFACSHAGLVEDGWYYFRSMKK 407
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 14/178 (7%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D + +I Y K G LD +F++M RD+ +N++IAG QS + GA E+F M
Sbjct: 213 DVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELF--MR 270
Query: 80 VRDVV------TWNSMISGYVCNGLID-EALRVFHGMPLK---DVVSWNLVIGALVNCQR 129
++D T S++ C G++ EA R H LK D++ N ++ C
Sbjct: 271 MKDAGFSANQGTLTSVLRA--CTGMVMLEAGRQVHAHVLKYERDLILHNALLDMYCKCGS 328
Query: 130 MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
++ AE+ F M RDV SW+ M++GL + G+ EA ++FD M ++ V + + G L
Sbjct: 329 LEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVL 386
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 46/217 (21%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP------------ 48
M+ + + +FD+M RD V WN +I G+ ++G A+ LF +M
Sbjct: 225 MKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLT 284
Query: 49 -------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDV 83
ERD+ +N ++ + +++ A+ +F M RDV
Sbjct: 285 SVLRACTGMVMLEAGRQVHAHVLKYERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDV 344
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQRMDLAES---YFKE 139
++W++MISG NG EALRVF M + V + ++G L C L E YF+
Sbjct: 345 ISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRS 404
Query: 140 MGA-----RDVASWTIMVNGLVREGRIVEARKLFDKM 171
M + MV+ L R G++ EA + M
Sbjct: 405 MKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDM 441
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 111/282 (39%), Gaps = 51/282 (18%)
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT----------VSNAMITMYARC 383
D + T ++ +C T GR IH A Q + VSN++++MYA+
Sbjct: 71 DPVSLTRLVKLCVRHGTAGDGRLIHRHVE--AHGQLSHYSGGAGGGIFVSNSLVSMYAKF 128
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLA-YHGYAEKALELFERMRLTDFKPDDITFVGV 442
G + AL F +P ++++W +++ LA G E+AL M P+ TF V
Sbjct: 129 GLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSV 188
Query: 443 LSACSYAGL--------------------------------VDQGRYYFDCMKNKYFLQP 470
L AC G+ +D GR FD M + +
Sbjct: 189 LGACGTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVV- 247
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
+ ++ + G A+ L ++ G + ++L AC ++ G
Sbjct: 248 ----WNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVH 303
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
V++ E + ++ L +MY CG EDA+ +F +M + V
Sbjct: 304 AHVLKYE-RDLILHNALLDMYCKCGSLEDAEALFHRMPQRDV 344
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 24/217 (11%)
Query: 18 QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
+RD + N ++ Y K G L++A LF++MP+RD+ +++T+I+GL Q+ A VFD
Sbjct: 310 ERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDL 369
Query: 78 MEVRDVVTWNSMISG--YVCN--GLIDEALRVFHGM-------PLKDVVSWNLVIGALVN 126
M+ V + G + C+ GL+++ F M P ++ N ++ L
Sbjct: 370 MKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPERE--HHNCMVDLLGR 427
Query: 127 CQRMDLAESYFKEMGAR-DVASWTIMVNG--LVREGRIV--EARKLFDKMPAKDVQAWNL 181
++D A + ++M D W ++ + + G + AR++ K+ D A L
Sbjct: 428 AGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREIL-KLEPDDQGARVL 486
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLT-----SWKQL 213
+ Y D AE ++ M DR + SW +L
Sbjct: 487 LSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIEL 523
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 14/147 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++A+ LF +MPQRD ++W+ MI G +NG A+ +F+ M + + G++ +
Sbjct: 329 LEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFA 388
Query: 66 DNVQG-----------AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-D 113
+ G K++F R+ N M+ G +DEA+ M L+ D
Sbjct: 389 CSHAGLVEDGWYYFRSMKKLFGIQPERE--HHNCMVDLLGRAGKLDEAVEFIRDMNLEPD 446
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEM 140
V W ++GA + +LA +E+
Sbjct: 447 AVIWRTLLGACRMHKSGNLAAYAAREI 473
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 201/650 (30%), Positives = 324/650 (49%), Gaps = 69/650 (10%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGL 62
QEA + + + ++ + G L A L M + DMF +++
Sbjct: 62 QEAMGMLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVY 121
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-PLKDVVSWNLVI 121
M+ + + A+ +FDGM ++VVTW ++I+G+ N AL VF M L S +
Sbjct: 122 MRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLG 181
Query: 122 GALVNC---QRMDLAES---YFKEMGARDVASWTIMVNGLVR----EGRIVEARKLFDKM 171
G L C +R+DL + Y + GA + S M N L R G + + F
Sbjct: 182 GMLSACSAARRIDLGQQVHGYSIKYGADTITS---MGNSLCRLYCKSGDLESGLRAFKGT 238
Query: 172 PAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFK 231
P K+V W MI+ AED + D L+ + ++ G V
Sbjct: 239 PDKNVITWTTMIS--------SCAED--ENYLDLGLSLFLDMLEGGV------------- 275
Query: 232 QMPETCEKTWNSIISVL---IRNGLVKEAHSYLEKYP-YSNIASWTNVIVGYFEMGEVGS 287
MP E T S++S+ + L K+ ++ K +N+ + + Y GE
Sbjct: 276 -MPN--EFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDE 332
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGE------NDL-----GEEGLKFFVQMKESGPSPDNA 336
A+++FE M + + WN MI G + +DL G + LK F + S PD
Sbjct: 333 AMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLF 392
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
TF+S+L++CS + L+ G QIHA IK V++A++ MY +CG+I+ A F +
Sbjct: 393 TFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEM 452
Query: 397 PIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
P ++W S+I G + HG ++ A++LFE M L+ +P++ITFV +LSACSYAGLV++
Sbjct: 453 PTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAE 512
Query: 457 YYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
YFD M+N+Y ++P HY C+VD+ R G +D+A + I+ G E + +W +L+
Sbjct: 513 RYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSF---IKRTGFEPNEAIWSSLVAG 569
Query: 517 CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI--FAQMKENGVKK 574
CR H N+++ A +R++EL+P Y++L MY+S GR D R+ A+ ++ GV +
Sbjct: 570 CRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARVRKLAKHEDVGVLR 629
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL-NLLHTEIEREILFDAY 623
+ SWI I D + F + D +HP+ L LL NLL E + + ++ Y
Sbjct: 630 DR--SWIAIRDKVYFFRADDMTHPQATELYQLLENLL--EKAKAVGYEPY 675
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 216/495 (43%), Gaps = 67/495 (13%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
MR A ++A+ LFD MP ++ VTW +I G+ N A+ +F +M E + + +
Sbjct: 122 MRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLG 181
Query: 61 GLMQSDNVQGAKEVFDGMEVR--------DVVT--WNSMISGYVCNGLIDEALRVFHGMP 110
G++ + A+ + G +V D +T NS+ Y +G ++ LR F G P
Sbjct: 182 GMLSA--CSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTP 239
Query: 111 LKDVVSWNLVIGALVNCQR-MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
K+V++W +I + + +DL S F D+ +M N + D
Sbjct: 240 DKNVITWTTMISSCAEDENYLDLGLSLF-----LDMLEGGVMPNEFTLTSVMSLCGARLD 294
Query: 170 KMPAKDVQAW--------NLMIAG-----YLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
K VQA+ NL + YL G A LF++M + +W +I+G
Sbjct: 295 MSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISG 354
Query: 217 ---LVNSRRID--------AAISYFKQMPETCEK----TWNSIISVL-----IRNGLVKE 256
+++S + D A+ F+ + + K T++SI+SV + G
Sbjct: 355 YAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIH 414
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
A++ ++ S++ + ++ Y + G + A K F M TR W MI G ++
Sbjct: 415 ANT-IKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRS 473
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS--- 373
++ ++ F M SG P+ TF S+L+ CS ++ + + RN++
Sbjct: 474 QDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERY----FDMMRNEYHIEPLVD 529
Query: 374 --NAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
M+ M+ R G + A ++ + ++ I W+S++ G HG E L + RL
Sbjct: 530 HYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAI-WSSLVAGCRSHGNME--LAFYAADRL 586
Query: 430 TDFKPDDI-TFVGVL 443
+ KP I T+V +L
Sbjct: 587 LELKPKVIETYVLLL 601
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 280/523 (53%), Gaps = 33/523 (6%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA-LVN 126
V A+ +FD M R+VVTWNS+ISGY+ G + A+ +F M + + A LV
Sbjct: 130 VSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVG 189
Query: 127 CQRMDLAESYFKEMG-------ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
C RM+ + + G ++ T +++ + I +R +FD MP +++ W
Sbjct: 190 CWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITW 249
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
M+AGY A L + M + N L++S + + KQ+ C
Sbjct: 250 TSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQV--HCR- 306
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+IR GL E++SYLE + + ++ + F KV +T D
Sbjct: 307 --------IIREGL--ESNSYLEVTLVTVYSECSSSSLEDFN--------KVCSGVTRWD 348
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
WN +I GL GE LK F +M+++G D TFTSVL + TLD G+QIHA
Sbjct: 349 QISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHA 408
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
+K V N +++MYARCG+I A FS + HD+ISWNS++ G AYHGY +
Sbjct: 409 LVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGRE 468
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ-PRSAHYTCV 478
A+ELFE+MR + KPD+ TF+ VLSAC + GL+D+G YFD M+N Y L+ P + HY+ +
Sbjct: 469 AVELFEQMRRSGVKPDNTTFLVVLSACRHVGLLDKGLEYFDLMRNDYSLESPTTEHYSSM 528
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
VDL R G + EA + +N + IE P+V+ ALL AC++H N+++ ++++++ P
Sbjct: 529 VDLFSRAGYLSEAEDFINTM---PIEPGPSVYKALLSACQVHGNVEIAVRCAKKLLQMCP 585
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
N+ +Y++L+ + + G ++ I M + GV+KEPG SWI
Sbjct: 586 NDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKEPGYSWI 628
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 220/473 (46%), Gaps = 41/473 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAG 61
+ AQ LFD+MP R+ VTWN +I GY G + A+ LF +M + + F+ + V+ G
Sbjct: 130 VSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVG 189
Query: 62 LMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+ ++ + +V G+ ++ ++V +I Y ID + +F MP +++++
Sbjct: 190 CWRMEDTKLGIQV-HGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIIT 248
Query: 117 WNLVIGALVNCQRMDLAESYFKEM---GAR-DVASWTIMVNGLVREGRIVEARKLFDKMP 172
W ++ +CQ+ A ++M G R + ++ +++ + +++ ++
Sbjct: 249 WTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRII 308
Query: 173 AKDVQAWNLMIAGYLD--NGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAA 226
+ +++ + + + + C + + F K+ D SW +I GL N +AA
Sbjct: 309 REGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAA 368
Query: 227 ISYFKQMPET-CEKTWNSIISVLIRNGLV------KEAHSYLEKYPY-SNIASWTNVIVG 278
+ F +M + + + SVL G++ K+ H+ + K Y SN+ ++
Sbjct: 369 LKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSM 428
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y G + A +VF LM DV WN ++ G + G E ++ F QM+ SG PDN TF
Sbjct: 429 YARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTTF 488
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS------NAMITMYARCGNIQSALLE 392
VL+ C + LD G + + RN ++ S ++M+ +++R G + A
Sbjct: 489 LVVLSACRHVGLLDKG----LEYFDLMRNDYSLESPTTEHYSSMVDLFSRAGYLSEAEDF 544
Query: 393 FSSVPIHDIIS-WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+++PI S + +++ HG E A+ + +L P+D +LS
Sbjct: 545 INTMPIEPGPSVYKALLSACQVHGNVEIAVRCAK--KLLQMCPNDPVIYVLLS 595
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 66/127 (51%)
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
LK Q+++ G +P +++ C+ ++ +G Q+H+ IK+ + + +A++ M
Sbjct: 64 LKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDM 123
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
Y +CG + SA F +P ++++WNS+I G + G E A+ELF M P +
Sbjct: 124 YGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSV 183
Query: 440 VGVLSAC 446
VL C
Sbjct: 184 SAVLVGC 190
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 194/639 (30%), Positives = 317/639 (49%), Gaps = 91/639 (14%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM--------PE------ 49
I A+ LF++MPQ +++N++IR Y + G +A+ +F +M P+
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 50 ---------------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
RD + N ++A M V+ A++VFD M+ RD
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 182
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRM-DLAESYFKEM 140
V++WN+MISGY NG +++AL +F M + V + ++ L C + DL EM
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDL------EM 236
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
G R+V ++VE ++L DK+ K N ++ YL G + A +F
Sbjct: 237 G-RNVH-------------KLVEEKRLGDKIEVK-----NALVNMYLKCGRMDEARFVFD 277
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVL-----I 249
+M RD+ +W +ING ++ A+ + M P T S++SV +
Sbjct: 278 RMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAV--TIASLVSVCGDALKV 335
Query: 250 RNGLVKEAHSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+G K H + + + YS+I T++I Y + V +VF + W+ +I
Sbjct: 336 NDG--KCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIA 393
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
G +N+L + L F +M+ P+ AT S+L + L L IH K
Sbjct: 394 GCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMS 453
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSV----PIHDIISWNSIICGLAYHGYAEKALELF 424
+ ++ +Y++CG ++SA F+ + D++ W ++I G HG AL++F
Sbjct: 454 SLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVF 513
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGR 484
M + P++ITF L+ACS++GLV++G F M Y RS HYTC+VDLLGR
Sbjct: 514 MEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGR 573
Query: 485 FGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVY 544
G +DEA NL+ I E + TVWGALL AC H N+++GE+A ++ ELEP N+G Y
Sbjct: 574 AGRLDEAYNLITTI---PFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNY 630
Query: 545 LILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQI 583
++L +Y + GR +D +++ + M+ G++K+PG S I+I
Sbjct: 631 VLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 191/446 (42%), Gaps = 52/446 (11%)
Query: 127 CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ--------- 177
C + A F+EM + S+ I++ VREG +A +F +M ++ V+
Sbjct: 62 CGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYP 121
Query: 178 ------------------------AW--------NLMIAGYLDNGCVGVAEDLFQKMHDR 205
+W N ++A Y++ G V +A D+F M +R
Sbjct: 122 FVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNR 181
Query: 206 DLTSWKQLINGLVNSRRIDAAISYFKQM-PETCEKTWNSIISVLIRNGLVKE------AH 258
D+ SW +I+G + ++ A+ F M E+ + +I+S+L G +K+ H
Sbjct: 182 DVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVH 241
Query: 259 SYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+E+ + N +V Y + G + A VF+ M RDV W MI G E+ E
Sbjct: 242 KLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVE 301
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
L+ M+ G P+ T S++++C D ++ G+ +H A++ + ++I
Sbjct: 302 NALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLI 361
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
+MYA+C + FS + W++II G + AL LF+RMR D +P+
Sbjct: 362 SMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIA 421
Query: 438 TFVGVLSACSYAGLVD-QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
T +L A YA L D + C K T +V + + G ++ A + N
Sbjct: 422 TLNSLLPA--YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFN 479
Query: 497 EIRADGIEVSPTVWGALLGACRIHNN 522
I+ +WGAL+ +H +
Sbjct: 480 GIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 203/472 (43%), Gaps = 86/472 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM-FTYNTVI 59
M +++ A+++FD M RD ++WN MI GY++NG++++A+ +F+ M + + T++
Sbjct: 163 MNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIV 222
Query: 60 AGL--------------------------------------MQSDNVQGAKEVFDGMEVR 81
+ L ++ + A+ VFD ME R
Sbjct: 223 SMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR 282
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAES------ 135
DV+TW MI+GY +G ++ AL + M + V + I +LV+ L +
Sbjct: 283 DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLH 342
Query: 136 --YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
++ D+ T +++ + R+ ++F W+ +IAG + N V
Sbjct: 343 GWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVS 402
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A LF++M D+ +N L+ + AA++ +Q
Sbjct: 403 DALGLFKRMRREDVEPNIATLNSLLPAY---AALADLRQ--------------------- 438
Query: 254 VKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVF----ELMTTRDVTVWNVMIF 308
H YL K + S++ + T ++ Y + G + SA K+F E ++DV +W +I
Sbjct: 439 AMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALIS 498
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG----RQIHAQAIKI 364
G G + G L+ F++M SG +P+ TFTS L CS ++ G R + +
Sbjct: 499 GYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTL 558
Query: 365 AR-NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYH 414
AR N +T + + + R G + A +++P + W +++ H
Sbjct: 559 ARSNHYTCI----VDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTH 606
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 137/329 (41%), Gaps = 47/329 (14%)
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS--PD 334
V Y G + A K+FE M + +N++I L + + F++M G PD
Sbjct: 57 VTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPD 116
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMITMYARCGNIQSALLE 392
T+ V +L ++ LG +H + ++ R+++ V NA++ MY G ++ A
Sbjct: 117 GYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKY--VQNALLAMYMNFGKVEMARDV 174
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY---- 448
F + D+ISWN++I G +GY AL +F+ M D T V +L C +
Sbjct: 175 FDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDL 234
Query: 449 -------------------------------AGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
G +D+ R+ FD M+ + + +TC
Sbjct: 235 EMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVIT-----WTC 289
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE-IAGERVMEL 536
+++ G ++ A+ L ++ +G+ + +L+ C + G+ + G V +
Sbjct: 290 MINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ 349
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFA 565
++ + L MY C R + R+F+
Sbjct: 350 VYSDIIIETSLISMYAKCKRVDLCFRVFS 378
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 193/663 (29%), Positives = 327/663 (49%), Gaps = 75/663 (11%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYN 56
+++ I A+ +FD +P++ TVTW MI G K G ++ LF Q+ E D + +
Sbjct: 194 LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILS 253
Query: 57 TVIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
TV++ ++G K++ G+E+ D N +I YV G + A ++F+GMP
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILRYGLEM-DASLMNVLIDSYVKCGRVIAAHKLFNGMPN 312
Query: 112 KDVVSWNLVIGA-------------------------LVNCQRMDLAESYFKEMG-ARDV 145
K+++SW ++ + C + + + +G V
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 146 ASWTI---------MVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
++TI + N L+ + + +ARK+FD A DV +N MI GY G
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ 432
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
+ D + + V+ R A+++ G
Sbjct: 433 WELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSL---------------------G 471
Query: 253 LVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
L K+ H + KY + +I + + +I Y + + VF+ M +D+ +WN M G
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYV 531
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+ EE L F++++ S PD TF +++T +L ++ LG++ H Q +K
Sbjct: 532 QQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPY 591
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
++NA++ MYA+CG+ + A F S D++ WNS+I A HG +KAL++ E+M
Sbjct: 592 ITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG 651
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
+P+ ITFVGVLSACS+AGLV+ G F+ M ++ ++P + HY C+V LLGR G +++A
Sbjct: 652 IEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKA 710
Query: 492 MNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMY 551
L+ ++ + + VW +LL C N+++ E A E + +P +SG + +L+ +Y
Sbjct: 711 RELIEKMPT---KPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIY 767
Query: 552 LSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLH 611
S G +AK++ +MK GV KEPG SWI IN H+FLS D SH K +++ +L+ L
Sbjct: 768 ASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLL 827
Query: 612 TEI 614
+I
Sbjct: 828 VQI 830
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 149/631 (23%), Positives = 264/631 (41%), Gaps = 102/631 (16%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------P------------- 48
A+ +F+KMP+R+ V+W+ M+ +G + ++ +F + P
Sbjct: 98 ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS 157
Query: 49 ----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
+RD++ +I ++ N+ A+ VFD + + VTW
Sbjct: 158 GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTW 217
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDLAES---------- 135
+MISG V G +L++F+ + +VV ++ +++ C + E
Sbjct: 218 TTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR 277
Query: 136 YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
Y EM D + ++++ V+ GR++ A KLF+ MP K++ +W +++GY N A
Sbjct: 278 YGLEM---DASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEA 334
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE--TCEKTWNSIISVLIRNGL 253
+LF M S F P+ C S S L G
Sbjct: 335 MELFTSM-------------------------SKFGLKPDMYACSSILTSCAS-LHALGF 368
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFG--- 309
+ H+Y K N + TN ++ Y + + A KVF++ DV ++N MI G
Sbjct: 369 GTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR 428
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
LG E L F M+ P TF S+L + L +L L +QIH K N
Sbjct: 429 LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLD 488
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
+A+I +Y+ C ++ + L F + + D++ WNS+ G E+AL LF ++L
Sbjct: 489 IFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQL 548
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+ +PD+ TF +++A V G+ F C K L+ ++D+ + G +
Sbjct: 549 SRERPDEFTFANMVTAAGNLASVQLGQ-EFHCQLLKRGLECNPYITNALLDMYAKCGSPE 607
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYLIL 547
+A + + + W +++ + H K E++M +EPN Y+
Sbjct: 608 DAHKAFDSAASRDV----VCWNSVISSYANHGEGKKALQMLEKMMSEGIEPN----YITF 659
Query: 548 TEMYLSC---GRREDAKRIFAQMKENGVKKE 575
+ +C G ED + F M G++ E
Sbjct: 660 VGVLSACSHAGLVEDGLKQFELMLRFGIEPE 690
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 142/565 (25%), Positives = 252/565 (44%), Gaps = 76/565 (13%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
E D + N +I ++ + A++VF+ M R++V+W++M+S +G+ +E+L VF
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 109 M--PLKDVVSWNLVIGALVNCQRMD--------LAESYFKEMG-ARDVASWTIMVNGLVR 157
KD + ++ + C +D +S+ + G RDV T++++ ++
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 158 EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL 217
+G I AR +FD +P K W MI+G + G V+ LF ++ + ++ +G
Sbjct: 196 DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVP-----DGY 250
Query: 218 VNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIV 277
+ S + A SI+ L G K+ H+++ +Y AS NV++
Sbjct: 251 ILSTVLSAC----------------SILPFL-EGG--KQIHAHILRYGLEMDASLMNVLI 291
Query: 278 -GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNA 336
Y + G V +A K+F M +++ W ++ G +N L +E ++ F M + G PD
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
+S+LT C+ L L G Q+HA IK + V+N++I MYA+C + A F
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411
Query: 397 PIHDIISWNSIICGLAYHGYA---EKALELFERMRLTDFKPDDITFVGVLSAC---SYAG 450
D++ +N++I G + G +AL +F MR +P +TFV +L A + G
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471
Query: 451 LVDQ----------------GRYYFDCMKNKYFLQPRSAHY--TCVVDLLGRFGLI---- 488
L Q G D N Y L+ + V DL+ +
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYV 531
Query: 489 -----DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG----ERVMELEPN 539
+EA+NL E++ + ++ A ++++G+ +R +E P
Sbjct: 532 QQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPY 591
Query: 540 NSGVYLILTEMYLSCGRREDAKRIF 564
+ L +MY CG EDA + F
Sbjct: 592 ITNA---LLDMYAKCGSPEDAHKAF 613
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 152/324 (46%), Gaps = 25/324 (7%)
Query: 149 TIMVNGLVREGRIVEARKLFDKMPAKDVQ-----AWNLMIAGYLDN---------GCVGV 194
TI + G R+++ R D + ++V W L + YL N G +
Sbjct: 38 TIGIRGRREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVY 97
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS-IISVLIR--N 251
A +F+KM +R+L SW +++ + + ++ F + T + + N I+S I+ +
Sbjct: 98 ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS 157
Query: 252 GL-------VKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
GL V + S+L K + ++ T +I Y + G + A VF+ + + W
Sbjct: 158 GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTW 217
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
MI G + L+ F Q+ E PD ++VL+ CS LP L+ G+QIHA ++
Sbjct: 218 TTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR 277
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
++ N +I Y +CG + +A F+ +P +IISW +++ G + ++A+EL
Sbjct: 278 YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMEL 337
Query: 424 FERMRLTDFKPDDITFVGVLSACS 447
F M KPD +L++C+
Sbjct: 338 FTSMSKFGLKPDMYACSSILTSCA 361
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 175/566 (30%), Positives = 272/566 (48%), Gaps = 73/566 (12%)
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDV 145
WN +I+ Y AL V+ + D N +A S K G
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNF------------MAPSVLKACGQ--- 136
Query: 146 ASWTIM---VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
SWT + ++G V +K D+ DV N ++ Y + CV A +F KM
Sbjct: 137 VSWTQLGKEIHGFV-------LKKGLDR----DVFVGNALMLMYGECACVEYARLVFDKM 185
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQM------PETCE------------------ 238
+RD+ SW +I L ++ D A+ ++M P
Sbjct: 186 MERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGK 245
Query: 239 -----------------KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFE 281
T +++ + + G + A + SWT +I G
Sbjct: 246 AMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIR 305
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
+ A +F+ RDV +W M+ + + ++ F QM+ SG P T S+
Sbjct: 306 SNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSL 365
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L++C+ LDLG+ +H+ K ++ A++ MYA+CG+I +A F DI
Sbjct: 366 LSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDI 425
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
WN+II G A HGY E+AL++F M KP+DITF+G+L ACS+AGLV +G+ F+
Sbjct: 426 CMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEK 485
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
M + + L P+ HY C+VDLLGR GL+DEA + I++ I+ + VWGAL+ ACR+H
Sbjct: 486 MVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEM---IKSMPIKPNTIVWGALVAACRLHK 542
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
N ++GE+A +++E+EP N G ++++ +Y + R DA + MK G+KKEPG S I
Sbjct: 543 NPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVI 602
Query: 582 QINDGGHVFLSGDSSHPKFHRLRYLL 607
++N H FL GD SHP+ R+ +L
Sbjct: 603 EVNGTVHEFLMGDQSHPQIRRINEML 628
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 181/450 (40%), Gaps = 79/450 (17%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+RD+F N ++ + V+ A+ VFD M RDVV+W++MI N D AL +
Sbjct: 156 DRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIRE 215
Query: 109 MPLKDVVSWNLVIGALVN-----------------------------------------C 127
M V + + ++VN C
Sbjct: 216 MNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKC 275
Query: 128 QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
+ LA F + + V SWT M+ G +R R+ EAR LFD +DV W M++ Y
Sbjct: 276 GHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYA 335
Query: 188 DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISV 247
C+ A +LF +M + K I L++ + A+
Sbjct: 336 QANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALD------------------- 376
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVM 306
L K HSY++K +V Y + G++ +A ++F +RD+ +WN +
Sbjct: 377 -----LGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAI 431
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
I G + GEE L F +M+ G P++ TF +L CS + G+++ + +
Sbjct: 432 ITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMV---- 487
Query: 367 NQFTTVSN-----AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKA 420
+ F V M+ + R G + A S+PI + I W +++ H +
Sbjct: 488 HTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQ-- 545
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAG 450
L +L + +P++ + VL + YA
Sbjct: 546 LGELAATQLLEIEPENCGY-NVLMSNIYAA 574
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 41/284 (14%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ LF+ + Q+ V+W MI G ++ L+ A LF+ RD+ + +++ Q++ +
Sbjct: 281 ARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCI 340
Query: 69 QGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG-A 123
A +FD M V VT S++S G +D + H K+ V + ++ A
Sbjct: 341 DQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG-KWVHSYIDKERVEVDCILNTA 399
Query: 124 LVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
LV+ C ++ A F E +RD+ W ++ G G EA +F +M + V+
Sbjct: 400 LVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPN 459
Query: 180 NLMIAGYL----DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
++ G L G V + LF+KM + F +P+
Sbjct: 460 DITFIGLLHACSHAGLVTEGKKLFEKM------------------------VHTFGLVPQ 495
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVG 278
+ + ++ +L R GL+ EAH ++ P N W ++
Sbjct: 496 I--EHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA 537
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 12/183 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+R+ R++EA+ LFD RD + W M+ Y + +D A LF+QM + I
Sbjct: 304 IRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIV 363
Query: 61 GLMQSDNVQGAKEV-------FDGMEVR-DVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
L+ V GA ++ D V D + +++ Y G I+ A R+F +
Sbjct: 364 SLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISR 423
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLF 168
D+ WN +I + A F EM + V I GL+ G + E +KLF
Sbjct: 424 DICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLF 483
Query: 169 DKM 171
+KM
Sbjct: 484 EKM 486
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 192/645 (29%), Positives = 311/645 (48%), Gaps = 80/645 (12%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGL 62
+ A LFDKM + + VT+N +I GY + LD M LF++ + D +T +
Sbjct: 111 RSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTAC 170
Query: 63 MQSDNVQGAKEV-----------------------------------FDGMEVRDVVTWN 87
QS N+ K + FD + D V+WN
Sbjct: 171 SQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWN 230
Query: 88 SMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG-ALVNCQ------RM--DLAESYFK 138
S+I+GYV NG +E L + M + +G AL C +M + +
Sbjct: 231 SLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAI 290
Query: 139 EMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL-----DNGCV 192
++G DV T +++ + G + +A ++FD+M K+V +N M+AG L ++ C
Sbjct: 291 KLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCA 350
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
A +LF +M + + L+ + I + KQ + +++ +NG
Sbjct: 351 YKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQ-----------VHALMCKNG 399
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
L+ + + I S +I Y +G + A+ F + + MI G +
Sbjct: 400 LLSDEY----------IGSI--LIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQ 447
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N E L F ++ PD +++++ C+++ L G QI A K+ ++FT
Sbjct: 448 NGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIF 507
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
N+ I MYA+ G++ +A L F + DI+SW+++IC A HG+A +AL FE M+
Sbjct: 508 QNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGI 567
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
+P+ F+GVL ACS+ GLV++G YFD M+ Y ++ H CVVDLLGR G + +A
Sbjct: 568 EPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAE 627
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
+L+ + G E P +W ALL ACRIH + + ++V+ELEP S Y++L +Y+
Sbjct: 628 SLILRL---GFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYM 684
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
G + A ++ M+E +KKEPG SWIQI D + F+SGD SH
Sbjct: 685 DAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSH 729
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 210/460 (45%), Gaps = 52/460 (11%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERD----MFTYNTVIAGLMQSDNVQGAKEVF 75
++V + +++ K G L++ + + M + +F N ++ + + + A ++F
Sbjct: 58 ESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLF 117
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFH-----GMPLKDVVSWNLVIGALVNCQR- 129
D M ++VT+NS+ISGYV +D+ + +F G+ L GAL C +
Sbjct: 118 DKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYT----CAGALTACSQS 173
Query: 130 --MDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMI 183
+ + + + S ++ N L+ + G++ AR LFD D +WN +I
Sbjct: 174 GNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLI 233
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV-NSRRIDAAISYFKQMPETCEKTWN 242
AGY+ NG + QKMH NGL N+ + +A+ + C +N
Sbjct: 234 AGYVQNGKYEELLTILQKMHQ----------NGLAFNTYTLGSAL-------KACSSNFN 276
Query: 243 --SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 300
+ ++ + +K + ++ T ++ Y + G + AI++F+ M ++V
Sbjct: 277 GCKMFGTMLHDHAIKLG-------LHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNV 329
Query: 301 TVWNVMIFGLGENDLGEE-----GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
++N M+ GL + + E+ L F +MK G P T++S+L C + +
Sbjct: 330 VMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAK 389
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
Q+HA K + + +I +Y+ G++ ALL F+S+ I+ ++I G +G
Sbjct: 390 QVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNG 449
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
E AL LF + + KPD+ ++S+C+ G++ G
Sbjct: 450 EFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSG 489
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 166/380 (43%), Gaps = 39/380 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ ++ A+ LFD + D V+WN +I GY +NG + + + +M + + +NT G
Sbjct: 207 KCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGL-AFNTYTLG 265
Query: 62 LMQ---SDNVQGAK---------EVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
S N G K + G+ + DVV +++ Y G +D+A+++F M
Sbjct: 266 SALKACSSNFNGCKMFGTMLHDHAIKLGLHL-DVVVGTALLDMYAKTGSLDDAIQIFDQM 324
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESY-----FKEMGARDVASWTIMVNGLVREGRIVEA 164
K+VV +N ++ L+ + ++ +Y F EM + + + L++ IVE
Sbjct: 325 VDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVED 384
Query: 165 RKLFDKMPA--------KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
K ++ A D +++I Y G + A F +H+ + +I G
Sbjct: 385 FKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXG 444
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISV---------LIRNGLVKEAHSYLEKYPYS 267
+ + ++A+S F ++ EK I S ++R+G + H+ K S
Sbjct: 445 YLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHA--TKVGIS 502
Query: 268 NIASWTNV-IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
+ N I Y + G++ +A F+ M D+ W+ MI ++ E L+FF M
Sbjct: 503 RFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELM 562
Query: 327 KESGPSPDNATFTSVLTICS 346
K G P++ F VL CS
Sbjct: 563 KSCGIEPNHFAFLGVLIACS 582
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 127/312 (40%), Gaps = 40/312 (12%)
Query: 255 KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
K HS++ K + N ++ Y + G+ SA K+F+ M+ ++ +N +I G +
Sbjct: 79 KLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQM 138
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
++ + F + + G D T LT CS L G+ IH + ++
Sbjct: 139 SNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLT 198
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
N++I MY++CG + A + F D +SWNS+I G +G E+ L + ++M
Sbjct: 199 NSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLA 258
Query: 434 PDDITFVGVLSACS--YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDE- 490
+ T L ACS + G G D K L T ++D+ + G +D+
Sbjct: 259 FNTYTLGSALKACSSNFNGCKMFGTMLHD-HAIKLGLHLDVVVGTALLDMYAKTGSLDDA 317
Query: 491 -----------------------------------AMNLLNEIRADGIEVSPTVWGALLG 515
A+NL E+++ GI+ S + +LL
Sbjct: 318 IQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLK 377
Query: 516 ACRIHNNIKVGE 527
AC I + K +
Sbjct: 378 ACIIVEDFKFAK 389
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 45/261 (17%)
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
L+ G+ +H+ IK + + N ++ MY +CG+ +SA F + +I+++NS+I G
Sbjct: 75 LNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISG 134
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
+K + LF++ R K D T G L+ACS +G + G+ + Y L
Sbjct: 135 YVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLIL-VYGLGS 193
Query: 471 RSAHYTCVVDLLGRFGLID-------------------------------EAMNLLNEIR 499
+ ++D+ + G +D E + +L ++
Sbjct: 194 QVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMH 253
Query: 500 ADGIEVSPTVWGALLGACRIH-NNIKV-GEIAGERVMELEPNNSGVYL------ILTEMY 551
+G+ + G+ L AC + N K+ G + + ++L G++L L +MY
Sbjct: 254 QNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKL-----GLHLDVVVGTALLDMY 308
Query: 552 LSCGRREDAKRIFAQMKENGV 572
G +DA +IF QM + V
Sbjct: 309 AKTGSLDDAIQIFDQMVDKNV 329
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 125/289 (43%), Gaps = 31/289 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDN-----AMCLFNQMP----ERDM 52
+ + +A +FD+M ++ V +N M+ G + +++ A+ LF +M + M
Sbjct: 310 KTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSM 369
Query: 53 FTYNTVIAGLMQSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
FTY++++ + ++ + AK+V M + D + +I Y G + +AL F+
Sbjct: 370 FTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNS 429
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEM-----GARDVASWTIMVN----GLVREG 159
+ +V +I + + A S F E+ + TIM + G++R G
Sbjct: 430 IHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSG 489
Query: 160 RIVEARKLFDKMPAKDVQAW-NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLV 218
++ K+ + N I Y +G + A FQ+M + D+ SW +I
Sbjct: 490 EQIQGHA--TKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNA 547
Query: 219 NSRRIDAAISYFKQMPETC--EKTWNSIISVLI---RNGLVKEAHSYLE 262
A+ +F+ M ++C E + + VLI GLV+E Y +
Sbjct: 548 QHGHAMEALRFFELM-KSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFD 595
>gi|242045336|ref|XP_002460539.1| hypothetical protein SORBIDRAFT_02g030160 [Sorghum bicolor]
gi|241923916|gb|EER97060.1| hypothetical protein SORBIDRAFT_02g030160 [Sorghum bicolor]
Length = 630
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 180/621 (28%), Positives = 302/621 (48%), Gaps = 51/621 (8%)
Query: 48 PERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFH 107
P + + IA L ++ + A+ VFD M RD V WN+M++ Y G +AL +F
Sbjct: 7 PFAGLVAATSRIASLGRAGDAASARAVFDAMPRRDAVAWNAMLTAYARAGQPRDALALFS 66
Query: 108 GMPLKDVVSW-----------------------------------NLVIGALVNCQRMDL 132
P D S N +I C R +
Sbjct: 67 RAPAPDAFSLTAALSAAAALRSPTAGAQLHARLLRVGLRALLPVGNSLISMYAKCARAED 126
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A F EM R+ SW +++ V + A++LFD+MP ++ AWN ++ GY +G
Sbjct: 127 AARAFGEMRERNALSWCSLLDAYVASDDLRLAQELFDEMPNRNNVAWNTLLMGYSRSGNA 186
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE-TCEKTWN-------SI 244
LF KM LT + LV++ A S + + + WN S+
Sbjct: 187 NHCLLLFNKMRMAGLTCDDATLCILVDACTELANPSAGSAIHKIVVQSGWNAMAEVSNSL 246
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
IS+ + L+ +A E I SW ++I Y ++G V A +F + +V W
Sbjct: 247 ISLYTKFSLLDDAVRIFESMEVQTIVSWNSLIDAYMKLGCVEKATSLFGSVPETNVISWT 306
Query: 305 VMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
MI GL N L +E L FV+M PD+ TF +VL C+ +L GR +H + +
Sbjct: 307 AMIGGLARNGLADEALILFVEMLAHEHIHPDDFTFGAVLHACATAASLASGRMVHCRVFQ 366
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
+ V+N++I MYA+CG+++ FS++ D++SWN+++ G A +G +AL +
Sbjct: 367 SGFVSYLYVANSLIDMYAKCGDLEGGTNVFSTIVNKDLVSWNTMLFGFAINGLPNEALVV 426
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
++ M+ D PD++TF G+L+ACS++GL++ G+ +F+ M + + +QP+ H +C++D+
Sbjct: 427 YDSMKSHDVCPDEVTFTGLLTACSHSGLLEHGKTFFELMVSVHGIQPKPEHLSCILDMYA 486
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRI-HNNIKVGEIAGERVMELEPNNSG 542
R G I +AM +L+ + + ALL AC + H N V A + ++ +
Sbjct: 487 RSGNITKAMEMLDRYSEMIQTHNSDIREALLSACSLEHLNFSVARKAVKDMVATKSAGDV 546
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSG--DSSHPKF 600
Y++L+ ++ + G+ A+R+ M E G+KK PGCSWI++ VF+SG D H +
Sbjct: 547 GYVMLSNLFCATGQWNQAERVRIAMAEYGIKKSPGCSWIEVQGAVKVFVSGAQDLDHSGW 606
Query: 601 HRLRYLLNLLHTEIEREILFD 621
+++LL E+ + FD
Sbjct: 607 D----VISLLDGEMRDIMFFD 623
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 180/388 (46%), Gaps = 26/388 (6%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N +I Y K ++A F +M ER+ ++ +++ + SD+++ A+E+FD M R+ V
Sbjct: 112 NSLISMYAKCARAEDAARAFGEMRERNALSWCSLLDAYVASDDLRLAQELFDEMPNRNNV 171
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRM--DLAESYFKEMG 141
WN+++ GY +G + L +F+ M + + + + LV+ C + A S ++
Sbjct: 172 AWNTLLMGYSRSGNANHCLLLFNKMRMAGLTCDDATLCILVDACTELANPSAGSAIHKIV 231
Query: 142 ARDVASWTIMV---NGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+ + W M N L+ + + +A ++F+ M + + +WN +I Y+ GCV
Sbjct: 232 VQ--SGWNAMAEVSNSLISLYTKFSLLDDAVRIFESMEVQTIVSWNSLIDAYMKLGCVEK 289
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-------PETCEKTWNSIISV 247
A LF + + ++ SW +I GL + D A+ F +M P+ + T+ +++
Sbjct: 290 ATSLFGSVPETNVISWTAMIGGLARNGLADEALILFVEMLAHEHIHPD--DFTFGAVLHA 347
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASW----TNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+ + S S+ ++I Y + G++ VF + +D+ W
Sbjct: 348 CATAASLASGRMVHCRVFQSGFVSYLYVANSLIDMYAKCGDLEGGTNVFSTIVNKDLVSW 407
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
N M+FG N L E L + MK PD TFT +LT CS L+ G+ +
Sbjct: 408 NTMLFGFAINGLPNEALVVYDSMKSHDVCPDEVTFTGLLTACSHSGLLEHGKTFFELMVS 467
Query: 364 IARNQFTTVS-NAMITMYARCGNIQSAL 390
+ Q + ++ MYAR GNI A+
Sbjct: 468 VHGIQPKPEHLSCILDMYARSGNITKAM 495
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 115/258 (44%), Gaps = 18/258 (6%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N +I Y K LD+A+ +F M + + ++N++I M+ V+ A +F + +V+
Sbjct: 244 NSLISLYTKFSLLDDAVRIFESMEVQTIVSWNSLIDAYMKLGCVEKATSLFGSVPETNVI 303
Query: 85 TWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIGALVNCQRMDLAESYFKE 139
+W +MI G NGL DEAL +F H D ++ V+ A +
Sbjct: 304 SWTAMIGGLARNGLADEALILFVEMLAHEHIHPDDFTFGAVLHACATAASLASGRMVHCR 363
Query: 140 MGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
+ S+ + N L+ + G + +F + KD+ +WN M+ G+ NG A
Sbjct: 364 VFQSGFVSYLYVANSLIDMYAKCGDLEGGTNVFSTIVNKDLVSWNTMLFGFAINGLPNEA 423
Query: 196 EDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIIS 246
++ M D+ ++ L+ +S ++ ++F+ M + + + I+
Sbjct: 424 LVVYDSMKSHDVCPDEVTFTGLLTACSHSGLLEHGKTFFELMVSVHGIQPKPEHLSCILD 483
Query: 247 VLIRNGLVKEAHSYLEKY 264
+ R+G + +A L++Y
Sbjct: 484 MYARSGNITKAMEMLDRY 501
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 49/219 (22%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTY 55
M+ +++A +LF +P+ + ++W MI G +NG D A+ LF +M D FT+
Sbjct: 282 MKLGCVEKATSLFGSVPETNVISWTAMIGGLARNGLADEALILFVEMLAHEHIHPDDFTF 341
Query: 56 -----------------------------------NTVIAGLMQSDNVQGAKEVFDGMEV 80
N++I + +++G VF +
Sbjct: 342 GAVLHACATAASLASGRMVHCRVFQSGFVSYLYVANSLIDMYAKCGDLEGGTNVFSTIVN 401
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI-GALVNCQRMDLAE---SY 136
+D+V+WN+M+ G+ NGL +EAL V+ M DV + G L C L E ++
Sbjct: 402 KDLVSWNTMLFGFAINGLPNEALVVYDSMKSHDVCPDEVTFTGLLTACSHSGLLEHGKTF 461
Query: 137 FKEMGA-----RDVASWTIMVNGLVREGRIVEARKLFDK 170
F+ M + + +++ R G I +A ++ D+
Sbjct: 462 FELMVSVHGIQPKPEHLSCILDMYARSGNITKAMEMLDR 500
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 167/558 (29%), Positives = 290/558 (51%), Gaps = 25/558 (4%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESYF 137
+V WNS+I NGL EAL ++ D ++ VI A ++A+S
Sbjct: 79 NVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 138
Query: 138 K---EMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
+MG D+ +++ R + +ARK+F++MP +DV +WN +I+GY NG
Sbjct: 139 DRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWN 198
Query: 194 VAED-------LFQKMHDR------DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
A + LF +M ++ +TS Q L + Y C+ T
Sbjct: 199 EALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTT 258
Query: 241 WNSI-ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
++I I++ + G + + + SW ++I Y + G++G ++KVFE M RD
Sbjct: 259 ASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARD 318
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
+ WN +I ++ GL+ +M+ G +PD AT S+L +CS L G++IH
Sbjct: 319 IITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHG 378
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
K+ V N +I MY++CG+++++ F + D+++W ++I +G +K
Sbjct: 379 CIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKK 438
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A+ F M PD + FV ++ ACS++GLV++G YF MK Y ++PR HY CVV
Sbjct: 439 AVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVV 498
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
DLL R L+D+A + I + ++ ++WGALL ACR+ + ++ E ER++EL P+
Sbjct: 499 DLLSRSALLDKAEDF---ILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPD 555
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
++G Y++++ +Y + G+ + + I +K G+KK+PGCSW++I + +VF +G +
Sbjct: 556 DTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQ 615
Query: 600 FHRLRYLLNLLHTEIERE 617
F + LL +L + +E
Sbjct: 616 FEEVNKLLGMLAGLMAKE 633
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 127/553 (22%), Positives = 238/553 (43%), Gaps = 98/553 (17%)
Query: 17 PQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVI---AGLM------ 63
P + WN +IR NG A+ L+++ + D +T+ +VI AGL+
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 64 --------------------------QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNG 97
+ +++ A++VF+ M +RDVV+WNS+ISGY NG
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 98 LIDEALRVFHGM-------------PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR- 143
+EAL +++ L + S G L + + Y G
Sbjct: 196 YWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYEC 255
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
D + I++N + G ++ ++++F M KD +WN MI Y+ NG +G + +F+ M
Sbjct: 256 DTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMK 315
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETCEKTWNSIISVLIRNGLV------KE 256
RD+ +W +I V+S + + +M E +++S+L L+ KE
Sbjct: 316 ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE 375
Query: 257 AHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDL 315
H + K + NV++ Y + G + ++ +VF+LM T+DV W +I G
Sbjct: 376 IHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGE 435
Query: 316 GEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA 375
G++ ++ F +M+ +G PD+ F +++ CS H+ ++ N F +
Sbjct: 436 GKKAVRAFGEMEAAGIVPDHVAFVAIIFACS-----------HSGLVEEGLNYFHRMKKD 484
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
I+ + ++ V D++S ++++ +KA + M L KPD
Sbjct: 485 Y--------KIEPRIEHYACVV--DLLSRSALL---------DKAEDFILSMPL---KPD 522
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP-RSAHYTCVVDLLGRFGLIDEAMNL 494
+ +LSAC +G + + + L P + +Y V ++ G D+ ++
Sbjct: 523 SSIWGALLSACRMSGDTEIAERVSERIIE---LNPDDTGYYVLVSNIYAALGKWDQVRSI 579
Query: 495 LNEIRADGIEVSP 507
I+A G++ P
Sbjct: 580 RKSIKARGLKKDP 592
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMT-TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
+I Y + S+ VF L + + +V +WN +I L N L E L + + +
Sbjct: 52 AKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRL 111
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
PD TF SV+ C+ L ++ + IH + + + + NA+I MY R ++ A
Sbjct: 112 QPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARK 171
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALEL-FERMRL-----TDFKPDDITFVGVLSA 445
F +P+ D++SWNS+I G +GY +ALE+ ++ ++L FKPD +T +L A
Sbjct: 172 VFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQA 231
Query: 446 CSYAGLVDQGRYYFDCM 462
C + G ++ G+Y D M
Sbjct: 232 CGHLGDLEFGKYVHDYM 248
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 135/315 (42%), Gaps = 57/315 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLF-----------NQMP------ 48
+ +A+ +F++MP RD V+WN +I GY NG+ + A+ ++ NQ
Sbjct: 166 LDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTI 225
Query: 49 ----------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
E D N +I + N+ ++EVF GM+
Sbjct: 226 TSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKC 285
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
+D V+WNSMI+ Y+ NG + ++L+VF M +D+++WN +I + V+ + +L M
Sbjct: 286 KDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRM 345
Query: 141 GARDVASWTIMVNGLVREGRIVEARK--------LFDKMPAKDVQAWNLMIAGYLDNGCV 192
V + ++ ++ A++ +F DV N++I Y G +
Sbjct: 346 RTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSL 405
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVL 248
+ +F+ M +D+ +W LI+ A+ F +M + +II
Sbjct: 406 RNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFAC 465
Query: 249 IRNGLVKEAHSYLEK 263
+GLV+E +Y +
Sbjct: 466 SHSGLVEEGLNYFHR 480
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 22/264 (8%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
+Q +F M +D+V+WN MI Y +NG + +++ +F M RD+ T+NT+IA + S++
Sbjct: 276 SQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDC 335
Query: 69 QGAKEVFDGMEVR----DVVTWNSMISGYVCNGLIDEAL-RVFHGMPLK-----DVVSWN 118
+ M D+ T S++ VC+ L + + HG K DV N
Sbjct: 336 NLGLRMISRMRTEGVTPDMATMLSILP--VCSLLAAKRQGKEIHGCIFKLGLESDVPVGN 393
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA----K 174
++I C + + FK M +DV +WT +++ G +A + F +M A
Sbjct: 394 VLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVP 453
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMH-----DRDLTSWKQLINGLVNSRRIDAAISY 229
D A+ +I +G V + F +M + + + +++ L S +D A +
Sbjct: 454 DHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF 513
Query: 230 FKQMPETCEKT-WNSIISVLIRNG 252
MP + + W +++S +G
Sbjct: 514 ILSMPLKPDSSIWGALLSACRMSG 537
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 198/633 (31%), Positives = 313/633 (49%), Gaps = 89/633 (14%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PER-------- 50
+ A+ LFD++ QR T+ +N MI+ Y G AM +F +M P+
Sbjct: 71 VHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIK 130
Query: 51 -------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVT 85
+F N+++A M V+ A++VFD M+ + VV+
Sbjct: 131 ACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVS 190
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMDLAESYFKEM--GA 142
WN+MI+GY NG + AL VF+ M V + V+ L C Y KE+ G
Sbjct: 191 WNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPAC-------GYLKELEVGR 243
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
R V+GLV E K+ K + + N ++ Y G + A +F M
Sbjct: 244 R--------VHGLVEE-----------KVLGKKIVS-NALVDMYAKCGSMDEARLVFDNM 283
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI----------RNG 252
+RD+ SW +ING + + +A+S FK M + NS+ LI ++G
Sbjct: 284 VERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRP-NSVTIALILLACASLNNLKDG 342
Query: 253 LVKEAHSYLEKYP-YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
+ H ++ K YS +A T++I Y + +G + VF + + WN ++ G
Sbjct: 343 --RCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCV 400
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
N L E + F +M G + AT S+L L L I++ ++
Sbjct: 401 HNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQ 460
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYHGYAEKALELFERMRL 429
V+ ++I +Y++CG+++SA F+++P+ DI W+ II G HG+ E A+ LF++M
Sbjct: 461 VATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQ 520
Query: 430 TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLID 489
+ KP+D+TF VL +CS+AG+VD G Y F M + P HYTC+VDLLGR G +D
Sbjct: 521 SGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMD 580
Query: 490 EAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTE 549
EA +L I+ VWGALLGAC +H N+++GE+A + ELEP N+G Y++L +
Sbjct: 581 EAYDL---IKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEPGNTGNYVLLAK 637
Query: 550 MYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
+Y + GR EDA+ + +M + G++K P S I+
Sbjct: 638 LYAALGRWEDAENVRQRMDDIGLRKAPAHSLIE 670
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 206/471 (43%), Gaps = 87/471 (18%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM-------- 52
M ++EA+ +FD M ++ V+WN MI GYFKNGF + A+ +FNQM + +
Sbjct: 168 MNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVV 227
Query: 53 ------------------------------FTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
N ++ + ++ A+ VFD M RD
Sbjct: 228 SVLPACGYLKELEVGRRVHGLVEEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERD 287
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIG-ALVNCQRMDLAESYFKEMG 141
VV+W SMI+GY+ NG AL +F M ++ + ++ I L+ C
Sbjct: 288 VVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLAC-------------- 333
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
AS + +G G +++ R L+ +V +I Y C+G++ +F +
Sbjct: 334 ----ASLNNLKDGRCLHGWVMKQR-LYS-----EVAVETSLIDMYAKCNCLGLSFSVFTR 383
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQM----PETCEKTWNSII---SVLIRNGLV 254
+ W L++G V+++ AI FK+M E T NS++ +L V
Sbjct: 384 TSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPV 443
Query: 255 KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMT--TRDVTVWNVMIFGLG 311
+SYL + + SNI T++I Y + G + SA K+F + +D+ VW+++I G G
Sbjct: 444 NNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYG 503
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+ GE + F QM +SG P++ TFTSVL CS +D G + K T
Sbjct: 504 MHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYL----FKFMLKDHQT 559
Query: 372 VSN-----AMITMYARCGNIQSALLEFSSVPI---HDIISWNSIICGLAYH 414
+ N M+ + R G + A ++P H + W +++ H
Sbjct: 560 IPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAV--WGALLGACVMH 608
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 153/312 (49%), Gaps = 17/312 (5%)
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI-FGLGEN 313
K+ H++L +I + ++ Y G V +A K+F+ + R ++N MI + +
Sbjct: 41 KQLHAHLITSGLLSIDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKG 100
Query: 314 DLGEEGLKFFVQMKESGPS-PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
D E +K F++M S PDN T+ V+ CS+L ++ GR +H + V
Sbjct: 101 DY-FEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFV 159
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
N+++ MY CG ++ A F ++ ++SWN++I G +G+A AL +F +M +
Sbjct: 160 LNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGV 219
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
+ D + V VL AC Y ++ GR ++ K + ++ +VD+ + G +DEA
Sbjct: 220 EIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKIVSN--ALVDMYAKCGSMDEAR 277
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE---PNNSGVYLILTE 549
+ + + +E W +++ ++ + K ++ ++M++E PN+ + LIL
Sbjct: 278 LVFDNM----VERDVVSWTSMINGYILNGDAK-SALSLFKIMQIEGLRPNSVTIALIL-- 330
Query: 550 MYLSCGRREDAK 561
L+C + K
Sbjct: 331 --LACASLNNLK 340
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 193/659 (29%), Positives = 312/659 (47%), Gaps = 69/659 (10%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D N ++ Y K GFL A LF++MP+RD ++NT+I+G ++ A +F M+
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 80 VR----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA-----LVNCQRM 130
D +++ ++ G D +V HG+ +K N+ +G+ C+R+
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQV-HGLVIKGGYECNVYVGSSLVDMYAKCERV 152
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK---------------- 174
+ A FKE+ + SW ++ G V+ I A L M K
Sbjct: 153 EDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTL 212
Query: 175 ------------------------DVQAWNLMIAGYLDNGCVGVAEDLFQKMH-DRDLTS 209
++ N MI+ Y D G V A+ +F + +DL S
Sbjct: 213 LDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLIS 272
Query: 210 WKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLI---RNGLVKEAHSYLE 262
W +I G ++A F QM ET T+ ++S K H +
Sbjct: 273 WNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVI 332
Query: 263 KYPYSNIASWTNVIVGY---FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
K + S TN ++ F G + A+ +FE + ++D+ WN +I G + L E+
Sbjct: 333 KKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDA 392
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMI 377
+KFF ++ S D+ F+++L CSDL TL LG+QIHA A K N+F V +++I
Sbjct: 393 VKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEF--VISSLI 450
Query: 378 TMYARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
MY++CG I+SA F + H ++WN++I G A HG + +L+LF +M + K D
Sbjct: 451 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDH 510
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
+TF +L+ACS+ GL+ +G + M+ Y +QPR HY VDLLGR GL+++A L+
Sbjct: 511 VTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIE 570
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
+ + P V LG CR I++ ++E+EP + Y+ L+ MY +
Sbjct: 571 SMP---LNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKK 627
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
E+ + MKE GVKK PG SWI+I + F + D S+P + ++ L E++
Sbjct: 628 WEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 203/470 (43%), Gaps = 87/470 (18%)
Query: 128 QRMDLAESYFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
Q++ L Y + G+ D+ +++ ++ G + A LFD+MP +D +WN MI+GY
Sbjct: 17 QKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGY 76
Query: 187 LDNGCVGVAEDLFQKMH----DRDLTSWKQLINGLVNSRRIDA----------------- 225
G + A LF M D D S+ +L+ G+ + +R D
Sbjct: 77 TSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNV 136
Query: 226 ------------------AISYFKQMPETCEKTWNSIIS--VLIRN-------------- 251
A FK++ E +WN++I+ V +R+
Sbjct: 137 YVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMK 196
Query: 252 -----------------------GLVKEAHSYLEKYPYSNIASWTNVIV-GYFEMGEVGS 287
L+K+ H+ + K + + N ++ Y + G V
Sbjct: 197 AAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSD 256
Query: 288 AIKVFE-LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
A +VF+ L ++D+ WN MI G +++L E + F+QM+ D T+T +L+ CS
Sbjct: 257 AKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR--CGNIQSALLEFSSVPIHDIISW 404
G+ +H IK Q T+ +NA+I+MY + G ++ AL F S+ D+ISW
Sbjct: 317 GEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISW 376
Query: 405 NSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKN 464
NSII G A G +E A++ F +R ++ K DD F +L +CS + G+
Sbjct: 377 NSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATK 436
Query: 465 KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
F+ + +V + + G+I+ A +I + + S W A++
Sbjct: 437 SGFVSNEFVISSLIV-MYSKCGIIESARKCFQQISS---KHSTVAWNAMI 482
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++A +LF+ + +D ++WN +I G+ + G ++A+ F+ + ++ + + L++S
Sbjct: 358 MEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRS 417
Query: 66 DNVQGAKEVFDGMEVRDVVT----------WNSMISGYVCNGLIDEALRVFHGMPLK-DV 114
+ ++ G ++ + T +S+I Y G+I+ A + F + K
Sbjct: 418 CSDLATLQL--GQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHST 475
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNGLVREGRIVEARKLFDK 170
V+WN +I ++ F +M ++V ++T ++ G I E +L +
Sbjct: 476 VAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNL 535
Query: 171 M-PAKDVQAWNLMIAGYLD----NGCVGVAEDLFQKM 202
M P +Q A +D G V A++L + M
Sbjct: 536 MEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESM 572
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 166/573 (28%), Positives = 288/573 (50%), Gaps = 57/573 (9%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM- 109
+ F + ++ + N++ A+ VF+ M R+VV W +++ G+V N A+ VF M
Sbjct: 98 NFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEML 157
Query: 110 ---PLKDVVSWNLVIGALVNCQRMDLAESY----FKEMGARDVASWTIMVNGLVREGRIV 162
+ + + V+ A + Q + L + + K D + + + + + GR+
Sbjct: 158 YAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLE 217
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+A K F ++ K+V +W ++ DNG LF +M D+ N
Sbjct: 218 DALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKP---------NEFT 268
Query: 223 IDAAISYFKQMP-----------------ETCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
+ +A+S ++P E+ + NS++ + +++G + EAH + +
Sbjct: 269 LTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMD 328
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
++ +W +I G+ +M E+ T+D L G E LK F +
Sbjct: 329 DVSMVTWNAMIAGHAQMMEL-----------TKD---------NLSACQRGSEALKIFSK 368
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
+ +SG PD T +SVL++CS + ++ G QIHAQ IK VS ++I+MY +CG+
Sbjct: 369 LNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGS 428
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
I+ A F + +I+W S+I G + HG +++AL +FE M L +P+ +TFVGVLSA
Sbjct: 429 IERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSA 488
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
CS+AG+V Q YF+ M+ KY ++P HY C+VD+ R G +++A+N + ++ E
Sbjct: 489 CSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKM---NYEP 545
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
S +W + CR H N+++G A E+++ L+P + Y++L MYLS R +D R+
Sbjct: 546 SEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRK 605
Query: 566 QMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
M+ V K SWI I D + F + D +HP
Sbjct: 606 MMEVEKVGKLKDWSWISIKDKVYSFKTNDKTHP 638
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 210/481 (43%), Gaps = 65/481 (13%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMF-TYNTVIAGLMQ 64
+++A+ +F+ MP+R+ V W ++ G+ +N +A+ +F +M + + T+ A L
Sbjct: 115 MEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHA 174
Query: 65 SDNVQGAK--EVFDGMEVRDVVTWNSMISGYVCN-----GLIDEALRVFHGMPLKDVVSW 117
++Q K + F ++ + +++ + +C+ G +++AL+ F + K+V+SW
Sbjct: 175 CSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISW 234
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA---- 173
+ A + F EM + D+ + + + + + +L ++ +
Sbjct: 235 TSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIK 294
Query: 174 ----KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING-----------LV 218
+++ N ++ YL +G + A F +M D + +W +I G L
Sbjct: 295 FGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLS 354
Query: 219 NSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEA---HSYLEKYPY-SNIA 270
+R A+ F ++ ++ K T +S++SV R +++ H+ K + S++
Sbjct: 355 ACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVI 414
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
T++I Y + G + A K F M+TR + W MI G ++ + ++ L F M +G
Sbjct: 415 VSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAG 474
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN------------AMIT 378
P+ TF VL+ CS HA + A N F + M+
Sbjct: 475 VRPNTVTFVGVLSACS-----------HAGMVSQALNYFEIMQKKYKIKPVMDHYECMVD 523
Query: 379 MYARCGNIQSAL---LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
M+ R G ++ AL + + P I W++ I G HG E L + +L KP
Sbjct: 524 MFVRLGRLEQALNFIKKMNYEPSEFI--WSNFIAGCRSHGNLE--LGFYASEQLLSLKPK 579
Query: 436 D 436
D
Sbjct: 580 D 580
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 84/191 (43%), Gaps = 5/191 (2%)
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
KE + + +L C D + + +H +K + V + ++ +YA+CGN+
Sbjct: 56 KEGTEEEEKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNM 115
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
+ A F ++P ++++W +++ G + + A+ +F+ M P T VL AC
Sbjct: 116 EDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHAC 175
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
S + G F KY L ++ + + L + G +++A+ + IR +
Sbjct: 176 SSLQSLKLGD-QFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNV--- 231
Query: 507 PTVWGALLGAC 517
W + + AC
Sbjct: 232 -ISWTSAVSAC 241
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 133/300 (44%), Gaps = 68/300 (22%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFL--DN---------AMCLFNQMPE 49
+++ I EA F++M VTWN MI G+ + L DN A+ +F+++ +
Sbjct: 312 LKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQ 371
Query: 50 R----DMFTYNTVIA---------------------GLM--------------QSDNVQG 70
D+FT ++V++ G + + +++
Sbjct: 372 SGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIER 431
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVN 126
A + F M R ++ W SMI+G+ +G+ +AL +F M L V V++ V+ A +
Sbjct: 432 ASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSH 491
Query: 127 CQRMDLAESYFKEMGARD-----VASWTIMVNGLVREGRIVEARKLFDKM---PAKDVQA 178
+ A +YF+ M + + + MV+ VR GR+ +A KM P++ +
Sbjct: 492 AGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFI-- 549
Query: 179 WNLMIAGYLDNGCVGV---AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
W+ IAG +G + + A + + +D ++ L+N +++ R D +S ++M E
Sbjct: 550 WSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFD-DVSRVRKMME 608
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 148/374 (39%), Gaps = 48/374 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
+ R+++A F ++ +++ ++W + NG + LF +M D+ FT +
Sbjct: 212 KCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTS 271
Query: 58 VIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++ + +++ +V G E ++ NS++ Y+ +G I EA R F+ M
Sbjct: 272 ALSQCCEIPSLELGTQVCSLCIKFGYE-SNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDV 330
Query: 113 DVVSWNLVIGA-----------LVNCQRMDLAESYFKEMGARDVASWTIMVNGL------ 155
+V+WN +I L CQR A F ++ + ++ +
Sbjct: 331 SMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSR 390
Query: 156 ---VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
+ +G + A+ + + DV +I+ Y G + A F +M R + +W
Sbjct: 391 MLAIEQGEQIHAQTIKTGFLS-DVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTS 449
Query: 213 LINGLVNSRRIDAAISYFKQM------PETCEKTWNSIISVLIRNGLVKEAHSYLE---- 262
+I G A+ F+ M P T T+ ++S G+V +A +Y E
Sbjct: 450 MITGFSQHGMSQQALHIFEDMSLAGVRPNTV--TFVGVLSACSHAGMVSQALNYFEIMQK 507
Query: 263 KYPYSNIASWTNVIVGYF-EMGEVGSAIKVFELMTTRDVT-VWNVMIFGL---GENDLGE 317
KY + +V F +G + A+ + M +W+ I G G +LG
Sbjct: 508 KYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGF 567
Query: 318 EGLKFFVQMKESGP 331
+ + +K P
Sbjct: 568 YASEQLLSLKPKDP 581
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 188/582 (32%), Positives = 295/582 (50%), Gaps = 65/582 (11%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN---- 126
A+ +FDGM R+VVTW ++++GY N L VF M + +GA +N
Sbjct: 92 ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLA 151
Query: 127 -CQRMDLAES---YFKEMGARDVASWTIMVNGL----VREGRIVEARKLFDKMPAKDVQA 178
C +DL + Y + GA + S M N L + G + A + F ++P K+V
Sbjct: 152 SCD-VDLGKQVHGYAIKYGAESITS---MGNSLCSLYAKLGSLDSALRAFWRIPEKNVIT 207
Query: 179 WNLMIAGYL-DNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
W MI+ D CV + LF M L++G+ MP
Sbjct: 208 WTTMISACAEDEECVELGMSLFIDM----------LMDGV---------------MPN-- 240
Query: 238 EKTWNSIISVL---IRNGLVKEAHSYLEKYP-YSNIASWTNVIVGYFEMGEVGSAIKVFE 293
E T S++S+ + L K+ ++ K +N+ + + Y GE A+++FE
Sbjct: 241 EFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFE 300
Query: 294 LMTTRDVTVWNVMIFGLGE------NDL-----GEEGLKFFVQMKESGPSPDNATFTSVL 342
M + WN MI G + +DL G + L F +K S PD TF+S+L
Sbjct: 301 QMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSIL 360
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDII 402
++CS + L+ G QIHAQ IK V++A++ MY +CG IQ A F +P +
Sbjct: 361 SVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFV 420
Query: 403 SWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
+W S+I G + HG ++A++LFE MRL +P++ITFV +LSACSYAGLV++ +YFD M
Sbjct: 421 TWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMM 480
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
K +Y ++P HY C++D+ R G +++A + I+ G E + +W +L+ CR H N
Sbjct: 481 KKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF---IKRTGFEPNEAIWSSLVAGCRSHGN 537
Query: 523 IKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
+++ A ++++EL+P Y++L MY+S R +D R+ MK+ V SWI
Sbjct: 538 MELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWIT 597
Query: 583 INDGGHVFLSGDSSHPKFHRLRYLL-NLLHTEIEREILFDAY 623
I D + F + D +HP+ L LL NLL E + I ++ Y
Sbjct: 598 IKDKVYFFRANDRTHPQATELYQLLENLL--EKAKAIGYEPY 637
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 222/502 (44%), Gaps = 83/502 (16%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNT 57
R AR +A+ LFD MP+R+ VTW ++ GY N + +F +M E +T
Sbjct: 87 RAAR--DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGA 144
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVR---DVVT--WNSMISGYVCNGLIDEALRVFHGMPLK 112
+ + S +V K+V G ++ + +T NS+ S Y G +D ALR F +P K
Sbjct: 145 TLNACLASCDVDLGKQVH-GYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEK 203
Query: 113 DVVSWNLVIGALVNCQR-MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
+V++W +I A + ++L S F +M V M N + D
Sbjct: 204 NVITWTTMISACAEDEECVELGMSLFIDMLMDGV-----MPNEFTLTSVMSLCGTRLDLN 258
Query: 172 PAKDVQAWNLMIAG-------------YLDNGCVGVAEDLFQKMHDRDLTSWKQLING-- 216
K VQA++ I YL G A LF++M D + +W +I+G
Sbjct: 259 LGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYA 318
Query: 217 -LVNSRRID--------AAISYFKQMPETCEK----TWNSIISVL-----IRNGLVKEAH 258
+++S + D A++ F+ + + K T++SI+SV + G ++ H
Sbjct: 319 QIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQG--EQIH 376
Query: 259 SYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ K + S++ + ++ Y + G + A K F M TR W MI G ++ +
Sbjct: 377 AQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQ 436
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--- 374
E ++ F +M+ +G P+ TF S+L+ CS +A ++ A + F +
Sbjct: 437 EAIQLFEEMRLAGVRPNEITFVSLLSACS-----------YAGLVEEAEHYFDMMKKEYC 485
Query: 375 ---------AMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
MI M+ R G ++ A ++ + ++ I W+S++ G HG E L
Sbjct: 486 IEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAI-WSSLVAGCRSHGNME--LAF 542
Query: 424 FERMRLTDFKPDDI-TFVGVLS 444
+ +L + KP I T++ +L+
Sbjct: 543 YAADKLLELKPKGIETYILLLN 564
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 119/287 (41%), Gaps = 67/287 (23%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFK-------------NGFLDNAMCLFNQM 47
+R EA LF++M +TWN MI GY + GF A+ +F +
Sbjct: 287 LRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGF--QALTIFRDL 344
Query: 48 P----ERDMFTYNTVIA------GLMQSDN-----------------------------V 68
+ D+FT++++++ L Q + +
Sbjct: 345 KRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCI 404
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-C 127
Q A + F M R VTW SMISGY +G EA+++F M L V + +L++ C
Sbjct: 405 QDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSAC 464
Query: 128 QRMDL---AESYFKEMGAR-----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA- 178
L AE YF M V + M++ VR GR+ +A + + +A
Sbjct: 465 SYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAI 524
Query: 179 WNLMIAGYLDNGCVGV---AEDLFQKMHDRDLTSWKQLINGLVNSRR 222
W+ ++AG +G + + A D ++ + + ++ L+N +++ R
Sbjct: 525 WSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTER 571
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 284/540 (52%), Gaps = 36/540 (6%)
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D+VQ A +F+G+E D N+++ YV AL ++ ++ V+ N L+
Sbjct: 106 DSVQHAVSLFEGLEEPDAFICNTIMRTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLL 165
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKL---FDKMPAKDVQAWNLM 182
W I G + +G + AR L F+ D+ N +
Sbjct: 166 V------------------KVCWEI---GSIGDGEKIHARILKFGFEL----DLFVRNSL 200
Query: 183 IAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN 242
I Y G +G A +F+ DL +W +I+G V + I AA F++MPE +WN
Sbjct: 201 IHMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWN 260
Query: 243 SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
S+I+ + NG + A K P+ +I SW +I GY ++ + A ++F M R+V
Sbjct: 261 SMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVS 320
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
WN+M+ +E L+ F +M P+ AT SVLT C+ L LD G+ IH+ I
Sbjct: 321 WNIMLALYVRIKDYDECLRMFDKMM-GETMPNEATLVSVLTACAHLGRLDRGKWIHSY-I 378
Query: 363 KIAR--NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
K R +S A++TMYA+CG + A F + ++SWNS+I G HG A+KA
Sbjct: 379 KNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKA 438
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
LE+F M P+D TF+ VLSAC+++G++ +G +YFD M+ Y ++P+ HY C+VD
Sbjct: 439 LEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVD 498
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
LLGR GL+ + L+ ++ +G +WGALL ACR H+N ++ EI +R++ELEP +
Sbjct: 499 LLGRAGLMKDLEELIRKMPMEG---GTALWGALLSACRTHSNSELAEIVAKRLIELEPRD 555
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND-GGHVFLSGDSSHPK 599
G YL+L+ +Y + G+ +D + + MKE G+ K G SW+ I + G F+ S H K
Sbjct: 556 IGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTGFSWVHIEEFGTQSFVEKASVHRK 615
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 184/397 (46%), Gaps = 39/397 (9%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
E D+F N++I + A+ +F+ + D+VTWNSMI GYV NG I A +F
Sbjct: 191 ELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEE 250
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
MP +D+ SWN +I V M AE F +M RD+ SW M++G + + A +LF
Sbjct: 251 MPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELF 310
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+ MP ++V +WN+M+A Y+ +F KM + + L++ L A +
Sbjct: 311 NWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETMPNEATLVSVLT-------ACA 363
Query: 229 YFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
+ ++ W I I+N V E L T ++ Y + G + A
Sbjct: 364 HLGRLDRG---KW---IHSYIKNNRVIEPDVLLS----------TALLTMYAKCGAMDLA 407
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
VF+ M+ R V WN MI G G + ++ L+ F+ M++ GP P++ATF VL+ C+
Sbjct: 408 RDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHS 467
Query: 349 PTL-------DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
+ DL R+ + K+ M+ + R G ++ +P+
Sbjct: 468 GMILEGWWYFDLMRRAYKIEPKVEH------YGCMVDLLGRAGLMKDLEELIRKMPMEGG 521
Query: 402 IS-WNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
+ W +++ H +E A E+ + RL + +P DI
Sbjct: 522 TALWGALLSACRTHSNSELA-EIVAK-RLIELEPRDI 556
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 143/271 (52%), Gaps = 12/271 (4%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
RI +A+ +F+ D VTWN MI GY KNG + A LF +MPERD+F++N++IAG +
Sbjct: 208 GRIGDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYV 267
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
+ ++ A+++F+ M RD+V+WN MI GY ++ A +F+ MP ++VVSWN+++
Sbjct: 268 GNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLAL 327
Query: 124 LVNCQRMDLAESYFKEMGARDVASWTIMVN--------GLVREGRIVEARKLFDKMPAKD 175
V + D F +M + + +V+ G + G+ + + +++ D
Sbjct: 328 YVRIKDYDECLRMFDKMMGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPD 387
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF----K 231
V ++ Y G + +A D+F KM +R + SW +I G + D A+ F K
Sbjct: 388 VLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEK 447
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLE 262
+ P + T+ ++S +G++ E Y +
Sbjct: 448 RGPMPNDATFICVLSACAHSGMILEGWWYFD 478
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 248/432 (57%), Gaps = 19/432 (4%)
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM-PETCEKTWNSIISVL-------- 248
+F +M ++D+ SW L+ G S R A+ ++M + C+ ++ SVL
Sbjct: 129 VFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGAD 188
Query: 249 IRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
+R G+ E H + + + ++ +++I Y ++KVF+ + RD +WN M+
Sbjct: 189 VRRGM--ELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSML 246
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
G +N +E L F +M SG P TF+S++ C +L +L LG+Q+HA I+ +
Sbjct: 247 AGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFD 306
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
+S+++I MY +CGN+ A F + DI+SW ++I G A HG A +AL LF+RM
Sbjct: 307 GNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRM 366
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
L + KP+ ITF+ VL+ACS+AGLVD+G YF+ M + Y + P H+ + D LGR G
Sbjct: 367 ELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGK 426
Query: 488 IDEAMNLLNEIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL 545
++EA N ++ G+++ PT VW LL AC++H N + E +++ +LEP + G ++
Sbjct: 427 LEEAYNFIS-----GMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHI 481
Query: 546 ILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRY 605
IL+ Y S GR +A + M++ G++KEP CSWI++ + HVF++ D SHP + R+
Sbjct: 482 ILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIID 541
Query: 606 LLNLLHTEIERE 617
LN+ ++ R+
Sbjct: 542 ALNVFSEQMVRQ 553
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 17/269 (6%)
Query: 287 SAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICS 346
S KVF+ M +DV WN ++ G E+ E L +M G PD+ T +SVL I +
Sbjct: 125 SVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFA 184
Query: 347 DLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNS 406
+ + G ++H A + + V +++I MYA C ++ F ++P+ D I WNS
Sbjct: 185 EGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNS 244
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC-SYAGLVDQGRYYFDCMKNK 465
++ G A +G ++AL LF RM + KP +TF ++ AC + A L+ + + ++
Sbjct: 245 MLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGG 304
Query: 466 Y----FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
+ F+ + ++D+ + G + A + + I++ I W A++ +H
Sbjct: 305 FDGNVFIS------SSLIDMYCKCGNVSIARRIFDRIQSPDI----VSWTAMIMGHALHG 354
Query: 522 NIKVGEIAGERVM--ELEPNNSGVYLILT 548
+ + +R+ L+PN+ +LT
Sbjct: 355 PAREALVLFDRMELGNLKPNHITFLAVLT 383
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 146/328 (44%), Gaps = 57/328 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
++ + +FD+MP++D V+WN ++ G ++G A+ L +M + D FT ++V+
Sbjct: 123 LESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPI 182
Query: 62 LMQSDNVQGAKE-----------------------------------VFDGMEVRDVVTW 86
+ +V+ E VFD + VRD + W
Sbjct: 183 FAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILW 242
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEM-- 140
NSM++G NG +DEAL +F M + V+++ +I A N + L + +
Sbjct: 243 NSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIR 302
Query: 141 GARD--VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
G D V + +++ + G + AR++FD++ + D+ +W MI G+ +G A L
Sbjct: 303 GGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVL 362
Query: 199 FQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMPE-----TCEKTWNSIISVLI 249
F +M +L ++ ++ ++ +D YF M + + ++ L
Sbjct: 363 FDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLG 422
Query: 250 RNGLVKEAHSYLEKYPYSNIAS-WTNVI 276
R G ++EA++++ AS W+ ++
Sbjct: 423 RPGKLEEAYNFISGMKIKPTASVWSTLL 450
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 122/300 (40%), Gaps = 70/300 (23%)
Query: 98 LIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM----------------- 140
+++ +VF MP KDVVSWN ++ R A +EM
Sbjct: 122 VLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLP 181
Query: 141 ----GA------------------RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
GA DV + +++ R + K+FD +P +D
Sbjct: 182 IFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAIL 241
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
WN M+AG NG V A LF++M L +G+ K MP
Sbjct: 242 WNSMLAGCAQNGSVDEALGLFRRM----------LHSGI-------------KPMP---- 274
Query: 239 KTWNSIISV---LIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFEL 294
T++S+I L L K+ H+Y+ + + N+ +++I Y + G V A ++F+
Sbjct: 275 VTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDR 334
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+ + D+ W MI G + E L F +M+ P++ TF +VLT CS +D G
Sbjct: 335 IQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKG 394
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 117/281 (41%), Gaps = 52/281 (18%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------P---------- 48
R + +FD +P RD + WN M+ G +NG +D A+ LF +M P
Sbjct: 223 RTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIP 282
Query: 49 -----------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVT 85
+ ++F +++I + NV A+ +FD ++ D+V+
Sbjct: 283 ACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVS 342
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEMG 141
W +MI G+ +G EAL +F M L ++ +++ V+ A + +D YF M
Sbjct: 343 WTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMS 402
Query: 142 -----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA-WNLMIAGYLDNGCVGVA 195
+ + + L R G++ EA M K + W+ ++ + +A
Sbjct: 403 DHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLA 462
Query: 196 EDLFQKMHD---RDLTSWKQLINGLVNSRRIDAAISYFKQM 233
E++ +K+ D R + S L N +S R + A K M
Sbjct: 463 EEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSM 503
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 119/305 (39%), Gaps = 55/305 (18%)
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTI-------CSDLPTLDLGRQIHAQAIKIARNQF 369
+ F++M+ S P+ A +SVLT C+ L LG +HA A++
Sbjct: 36 HHAIALFLRMRASDPA---AACSSVLTSLPGALKSCAALGLRALGASLHALALRSGAFAD 92
Query: 370 TTVSNAMITMYARCGNIQSALLE--------------FSSVPIHDIISWNSIICGLAYHG 415
+NA++ +Y + S E F +P D++SWN+++ G A G
Sbjct: 93 RFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESG 152
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR------------------- 456
+AL L M KPD T VL + V +G
Sbjct: 153 RHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGS 212
Query: 457 ----YYFDCMKNKYF------LQPRSA-HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
Y +C + Y L R A + ++ + G +DEA+ L + GI+
Sbjct: 213 SLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKP 272
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTEMYLSCGRREDAKRIF 564
P + +L+ AC ++ +G+ V+ N + L +MY CG A+RIF
Sbjct: 273 MPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIF 332
Query: 565 AQMKE 569
+++
Sbjct: 333 DRIQS 337
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 271/545 (49%), Gaps = 60/545 (11%)
Query: 53 FTYNTVIAGLMQSDNVQG---AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
F + +IA + + + Q A +F + + WN++I Y + + AL +FH M
Sbjct: 40 FAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQM 99
Query: 110 PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFD 169
V L + Y + S++ V EGR + L
Sbjct: 100 LHASV-----------------LPDKYTFTFALKSCGSFSG-----VEEGRQIHGHVLKT 137
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+ D+ N +I Y GC+ A L +M +RD+ SW
Sbjct: 138 GL-GDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSW------------------- 177
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAI 289
N+++S GL++ A ++ N+ SW +I GY +G + A
Sbjct: 178 ------------NALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEAR 225
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
+VF ++V WN MI G E L F M+ +G PDN T SVL+ C+ +
Sbjct: 226 RVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVG 285
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
L G +HA K + V+ A++ MY++CG+I+ AL F+S DI +WNSII
Sbjct: 286 ALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIIS 345
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
GL+ HG + AL++F M + FKP+++TFV VLSACS AGL+D+GR F+ M + + +Q
Sbjct: 346 GLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQ 405
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
P HY C+VDLLGR GL++EA L+ ++ V VW +LLGACR H N+++ E
Sbjct: 406 PTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASV---VWESLLGACRNHGNVELAERV 462
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
++++EL P S ++ L+ MY S GR +D + +M+ GV+K+PGCS I+++ +
Sbjct: 463 AQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTVYE 522
Query: 590 FLSGD 594
FL+G+
Sbjct: 523 FLAGE 527
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 201/453 (44%), Gaps = 59/453 (13%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYNT-- 57
I A ++F ++P ++ WN +IR Y + + A+ +F+QM P++ FT+
Sbjct: 58 IPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKS 117
Query: 58 --VIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+G+ + + G V D+ N++I Y G I++A + M +DVV
Sbjct: 118 CGSFSGVEEGRQIHG--HVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVV 175
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
SWN ++ A M+LA F EM R+V SW M++G V G + EAR++F + P K+
Sbjct: 176 SWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKN 235
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
V +WN MI GY G LF+ M + P+
Sbjct: 236 VVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVK-------------------------PD 270
Query: 236 TCEKTWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKV 291
C T S++S G + + H+Y++K S +V Y + G + A++V
Sbjct: 271 NC--TLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEV 328
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F +D++ WN +I GL + G+ L+ F +M G P+ TF VL+ CS L
Sbjct: 329 FNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLL 388
Query: 352 DLGRQ-----IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI-ISWN 405
D GR+ +H I+ + M+ + R G ++ A +P + + W
Sbjct: 389 DEGREMFNLMVHVHGIQPTIEHY----GCMVDLLGRVGLLEEAEELVQKMPQKEASVVWE 444
Query: 406 SIICGLAYHGYAEKALELFERM--RLTDFKPDD 436
S++ HG +EL ER+ +L + P +
Sbjct: 445 SLLGACRNHG----NVELAERVAQKLLELSPQE 473
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 102/249 (40%), Gaps = 27/249 (10%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M S P P +F + T S+L Q HA +K T ++ +I + +
Sbjct: 1 MSSSFPPPPILSFAEMATSISEL------HQAHAHILKSGLIHSTFAASRLIASVSTNSH 54
Query: 386 IQS---ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
Q+ A FS +P + WN+II A E AL +F +M PD TF
Sbjct: 55 AQAIPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFA 114
Query: 443 LSACSYAGLVDQGRYYF-----DCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
L +C V++GR + + F+Q ++ L G I++A +LL+
Sbjct: 115 LKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQ------NTLIHLYASCGCIEDARHLLDR 168
Query: 498 IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRR 557
+ +E W ALL A + + E+A E+ N + + Y+ G
Sbjct: 169 M----LERDVVSWNALLSA---YAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLL 221
Query: 558 EDAKRIFAQ 566
E+A+R+F +
Sbjct: 222 EEARRVFGE 230
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 155/491 (31%), Positives = 265/491 (53%), Gaps = 14/491 (2%)
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
N +I C A F EM R++ SW M++G + G+I ARKLFDKMP KDV
Sbjct: 90 NHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVV 149
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQM 233
+WN M+ Y +G A ++++ + S+ L+N V + ++ + Q+
Sbjct: 150 SWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQV 209
Query: 234 PETCEKTWNSIISVLIRNGLVK-----EAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
+ N +IS + + K +A ++ ++ +WT ++ GY + G+V +A
Sbjct: 210 LVAGFLS-NLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAA 268
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
++F+LM ++ W +I G +DLG + L+ F +M PD TF+S L + +
Sbjct: 269 RELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASI 328
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSI 407
+L+ G+QIH I+ T V +++I MY++CG ++ L F + D++ WN+I
Sbjct: 329 ASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTI 388
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
I LA HG ++A+++F+ M KPD IT + +L+ACS++GLV +G ++ + + +
Sbjct: 389 ISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHG 448
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
+ P HY C++DLLGR G D MN L ++ + + +W ALLG CR+H NI+ G
Sbjct: 449 VIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPC---KPNDEIWNALLGVCRMHGNIEFGR 505
Query: 528 IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGG 587
E+++EL+P +S Y++L+ ++ + GR E + + M E V+K+ SWI+I +
Sbjct: 506 EVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENVRQLMNERHVRKDRAISWIEIENKV 565
Query: 588 HVFLSGDSSHP 598
H F + D HP
Sbjct: 566 HSFTASDRLHP 576
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 203/463 (43%), Gaps = 83/463 (17%)
Query: 16 MPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF 75
+ + +T N +I Y K G +A +F++M R+++++N +++G + ++ A+++F
Sbjct: 81 LKRPNTFLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLF 140
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVF----------------------------- 106
D M +DVV+WN+M+ Y +G ++ALR +
Sbjct: 141 DKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELE 200
Query: 107 -----HGMPLKDVVSWNLVIG-----ALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV 156
HG L NLVI A C M A F EM RDV +WT MV+G
Sbjct: 201 LSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYA 260
Query: 157 REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
+ G + AR+LFD MP K+ AW +IAGY + A +LF KM ++ + +
Sbjct: 261 QWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSS 320
Query: 217 LVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVI 276
+ + A++++ KQ+ H YL + +NI T V+
Sbjct: 321 CLCASASIASLNHGKQI------------------------HGYLIR---TNIRPNTIVV 353
Query: 277 VGYFEMG------EVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
+M EVG VF+LM + DV +WN +I L ++ G+E ++ F M
Sbjct: 354 SSLIDMYSKCGCLEVGRL--VFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRL 411
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK---IARNQFTTVSNAMITMYARCGNI 386
G PD T +L CS + G +++ + NQ +I + R G+
Sbjct: 412 GMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYA--CLIDLLGRAGHF 469
Query: 387 QSALLEFSSVPI--HDIISWNSIICGLAYHGYAEKALELFERM 427
+ + + +P +D I WN+++ HG E E+ E++
Sbjct: 470 DTLMNQLEKMPCKPNDEI-WNALLGVCRMHGNIEFGREVAEKI 511
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/412 (20%), Positives = 171/412 (41%), Gaps = 79/412 (19%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYN------- 56
+I+ A+ LFDKMP++D V+WN M+ Y K+GF ++A+ + ++ R YN
Sbjct: 131 GKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYREL-RRLGIGYNEYSFAGL 189
Query: 57 -------------------TVIAGLM--------------QSDNVQGAKEVFDGMEVRDV 83
++AG + + + A+ +FD M +RDV
Sbjct: 190 LNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDV 249
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
+ W +M+SGY G ++ A +F MP K+ V+W +I A F +M A
Sbjct: 250 LAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMAL 309
Query: 144 DVA----SWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN----GCVGVA 195
++ +++ + + +++ + +++ ++++ +D GC+ V
Sbjct: 310 NIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVG 369
Query: 196 EDLFQKMHDR-DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
+F M D+ D+ W +I+ L R AI F M K + I +++ N
Sbjct: 370 RLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKP-DRITLIVLLNAC- 427
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+HS G V ++++E +T+ + N + +
Sbjct: 428 --SHS-----------------------GLVQEGLRLYESITSCHGVIPNQEHYACLIDL 462
Query: 315 LGEEGL--KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
LG G Q+++ P++ + ++L +C ++ GR++ + I++
Sbjct: 463 LGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIEL 514
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 148/320 (46%), Gaps = 32/320 (10%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDN 67
+A+ LFD+M RD + W M+ GY + G ++ A LF+ MPE++ + ++IAG + D
Sbjct: 236 DARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDL 295
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEAL---RVFHGMPLKDVVSWN-LVIGA 123
A E+F M ++ S +C +L + HG ++ + N +V+ +
Sbjct: 296 GHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSS 355
Query: 124 LVN----CQRMDLAESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
L++ C +++ F MG + DV W +++ L + GR EA ++FD M ++
Sbjct: 356 LIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKP 415
Query: 179 WNLMIAGYLD----NGCVGVAEDLFQKMHD-----RDLTSWKQLINGLVNSRRIDAAISY 229
+ + L+ +G V L++ + + + LI+ L + D ++
Sbjct: 416 DRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQ 475
Query: 230 FKQMP-ETCEKTWNSIISVLIRNGLVKEAHSYLEKY----PYSNIA----SWTNVIVGYF 280
++MP + ++ WN+++ V +G ++ EK P S+ A S + VG +
Sbjct: 476 LEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRW 535
Query: 281 EMGEVGSAIKVFELMTTRDV 300
E+ E V +LM R V
Sbjct: 536 ELVE-----NVRQLMNERHV 550
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 275/527 (52%), Gaps = 56/527 (10%)
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYF 137
M R+VV+W S+I+GY NG AL + M V+ G+++ A S
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIK------ACSSL 54
Query: 138 KEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
++G GR + A L + A + A N +I+ Y + + A D
Sbjct: 55 GDIGL----------------GRQLHAHVLKSEFGAH-IIAQNALISMYTKSNLIIDALD 97
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
+F +M RDL SW +I G A+ YFK+M + G
Sbjct: 98 VFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEM---------------LHQG----- 137
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM-TTRDVTVWNVMIFGLGENDLG 316
++ +W +I G F GE+ AI FE M D+ WN ++ +D
Sbjct: 138 --------RPDLVAWNAIIAG-FAYGELRDAIFFFEEMRCNADLVSWNAILTACMRHDQA 188
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
EE + M S PD T T+VL ++ ++++G Q+H A+K N T+V+N +
Sbjct: 189 EEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGL 248
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
I +YA+CG++++A F S+ D++SW+S+I G A GY E+AL+LF+ MR D KP+
Sbjct: 249 IDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNH 308
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
+TFVGVL+ACS+ GLV++G + M+ ++ + P H +C+VDLL R G ++EA ++
Sbjct: 309 VTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIH 368
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
++ D V VW LL AC+ H N+ VG+ A E +++++P+NS +++L +Y S G
Sbjct: 369 QMAFDPDIV---VWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGN 425
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL 603
ED R+ + MK+ GV+K PG SWI++ D HVF DS HP+ +++
Sbjct: 426 WEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKI 472
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 188/419 (44%), Gaps = 48/419 (11%)
Query: 16 MPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGLMQSDNV--- 68
MP+R+ V+W +I GY +NG NA+ + QM + D FT+ ++I ++
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 69 -QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC 127
Q V ++ N++IS Y + LI +AL VF M +D++SW +I
Sbjct: 61 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 120
Query: 128 QRMDLAESYFKEM---GARDVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMI 183
A YFKEM G D+ +W ++ G G + +A F++M D+ +WN ++
Sbjct: 121 GYELEALCYFKEMLHQGRPDLVAWNAIIAGFAY-GELRDAIFFFEEMRCNADLVSWNAIL 179
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS 243
+ HD+ ++ L ++ R D I+ + + E
Sbjct: 180 TACMR--------------HDQAEEVFRLLKLMCISQHRPD-YITLTNVLGASAET---- 220
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTV 302
+S+ I N + H Y K + S TN ++ Y + G + +A K+F+ M DV
Sbjct: 221 -VSIEIGN----QVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVS 275
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
W+ +I G + GEE LK F M+ P++ TF VLT CS + ++ G +++
Sbjct: 276 WSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTME 335
Query: 363 K---IARNQFTTVSNAMITMYARCGNIQSA---LLEFSSVPIHDIISWNSIICGLAYHG 415
K IA + + M+ + AR G + A + + + P DI+ W +++ HG
Sbjct: 336 KEFGIAPTR--EHCSCMVDLLARAGCLNEAEGFIHQMAFDP--DIVVWKTLLAACKTHG 390
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 135/302 (44%), Gaps = 23/302 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER---DMFTYNTVIAGL 62
I +A ++F +M RD ++W MI G+ + G+ A+C F +M + D+ +N +IAG
Sbjct: 92 IIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGRPDLVAWNAIIAGF 151
Query: 63 MQSDNVQGAKEVFDGMEVR-DVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSW 117
+ ++ A F+ M D+V+WN++++ + + +E R+ M + D ++
Sbjct: 152 AYGE-LRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITL 210
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPA 173
V+GA +++ + T + NGL+ + G + A K+FD M
Sbjct: 211 TNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMIN 270
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
DV +W+ +I GY G A LF+ M D+ G++ + + ++
Sbjct: 271 PDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKL 330
Query: 234 PETCEKTW---------NSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMG 283
T EK + + ++ +L R G + EA ++ + + +I W ++ G
Sbjct: 331 YGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHG 390
Query: 284 EV 285
V
Sbjct: 391 NV 392
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D N +I + +++ A ++FD M DVV+W+S+I GY G +EAL++F M
Sbjct: 241 DTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMR 300
Query: 111 LKDVVSWNLV-IGALVNCQRMDLAESYFKEMG--------ARDVASWTIMVNGLVREGRI 161
DV ++ +G L C + L E +K G A + MV+ L R G +
Sbjct: 301 RLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCL 360
Query: 162 VEARKLFDKMP-AKDVQAWNLMIAGYLDNGCVGVAE 196
EA +M D+ W ++A +G V V +
Sbjct: 361 NEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGK 396
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 20/193 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ A +FD M D V+W+ +I GY + G+ + A+ LF M D+ + G++ +
Sbjct: 258 LKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTA 317
Query: 66 DNVQGAKE----VFDGMEVRDVVT-----WNSMISGYVCNGLIDEALRVFHGMPL-KDVV 115
+ G E ++ ME + + M+ G ++EA H M D+V
Sbjct: 318 CSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIV 377
Query: 116 SWNLVIGALVNCQRMDL----AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM 171
W ++ A +D+ AE+ K + + A+ ++ N +G + +L M
Sbjct: 378 VWKTLLAACKTHGNVDVGKRAAENILK-IDPSNSAAHVLLCNIYASKGNWEDVARLRSLM 436
Query: 172 PAKDV-----QAW 179
+ V Q+W
Sbjct: 437 KQRGVRKVPGQSW 449
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 184/606 (30%), Positives = 312/606 (51%), Gaps = 38/606 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ +FD+M Q + WN MIRGY +A+ LF M + N +A + QS
Sbjct: 72 ARKVFDRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAA 131
Query: 69 ------QGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ + + R D+ + +I+ Y + +++A +VF M +DVVSW
Sbjct: 132 FASWKGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSW 191
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGL---------VREGRIVEARKLF 168
L+I A C + D EM + I + L V +G V AR
Sbjct: 192 TLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDE 251
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
+ A DV N +I Y+ GC+ A F+ M R+ SW LI+G V + + A++
Sbjct: 252 YGIEA-DVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALT 310
Query: 229 YFKQM------PETCEKTWNSIISVLIRNGLVKEA---HSYLEKYP-YSNIASWTNVIVG 278
F++M P+ T S++S + G +++ H+Y++ + + +I ++I
Sbjct: 311 MFEEMLSDGVIPDVI--TLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINM 368
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G++ +A +FE M RD+ W M+ G + F MK
Sbjct: 369 YAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMAL 428
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
S+L+ CS L LD GR+IH+ + + + +A++ MYA+CG I +A FS +
Sbjct: 429 VSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRH 488
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
++WN++I GLA G ++A+ LFE++ +L D KPD IT VL AC++ G+VD+G +
Sbjct: 489 KQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLH 548
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
YF+ M + P + HY C+VDLLGR GL+DEA N + ++ I+ +P +WG+LL AC
Sbjct: 549 YFNLMLTLGIV-PDNEHYGCIVDLLGRAGLLDEAYNFIQKM---PIQPNPVIWGSLLAAC 604
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
R+H+ +++G+I G+ +++L PN+ G +++++ ++ G+ +D +++ M V+K PG
Sbjct: 605 RVHHRMELGKIIGQHIIDLAPNDVGAHVLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPG 664
Query: 578 CSWIQI 583
S IQ+
Sbjct: 665 HSSIQV 670
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 203/459 (44%), Gaps = 30/459 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+++A+ +F++M +RD V+W +MI + + G DN + ++M + T ++++
Sbjct: 173 VEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSA 232
Query: 62 LMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
Q V V+ G+E DV N++I YV G + +A + F GMP+++ S
Sbjct: 233 CGQVRAVDKGLWVYARVDEYGIEA-DVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKS 291
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGA----RDVASWTIMVNGLVREGRIVEARKLFDKMP 172
WN +I V + A + F+EM + DV + +++ + G + + R L + +
Sbjct: 292 WNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIK 351
Query: 173 AKDVQA----WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
++ N +I Y G + AE +F+ M RD+ SW ++ G V + A +
Sbjct: 352 DHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFN 411
Query: 229 YFKQMP----ETCEKTWNSIISVLIRNGLV---KEAHSYL-EKYPYSNIASWTNVIVGYF 280
F M E S++S + G + +E HSY+ EK +++ + ++ Y
Sbjct: 412 LFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYA 471
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ-MKESGPSPDNATFT 339
+ G + +A ++F M + WN MI GL G+E + F Q +K P PD T
Sbjct: 472 KCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLK 531
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH 399
VL C+ + +D G + + ++ + R G + A +PI
Sbjct: 532 VVLCACTHVGMVDEGLHYFNLMLTLGIVPDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQ 591
Query: 400 -DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
+ + W S++ H E L + D P+D+
Sbjct: 592 PNPVIWGSLLAACRVHHRME--LGKIIGQHIIDLAPNDV 628
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 303/599 (50%), Gaps = 41/599 (6%)
Query: 35 GFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYV 94
G + A LF ++PE D+ +N +I G + D ++ M +++ VT +S ++
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNM-LKEGVTPDSHTFPFL 140
Query: 95 CNGLIDEALRVFHGMPLK-DVVSWNL-----VIGALVN----CQRMDLAESYFKEMGARD 144
NGL + + G L VV + L V ALV C MD+A F D
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 145 VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD 204
V SW +M++G R E+ +L +M V ++ + L + C K+ D
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVL-SAC--------SKVKD 251
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
+DL +R+ +S K P + N++++ G + A
Sbjct: 252 KDLC------------KRVHEYVSECKTEPSL--RLENALVNAYAACGEMDIAVRIFRSM 297
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
++ SWT+++ GY E G + A F+ M RD W +MI G E L+ F
Sbjct: 298 KARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFR 357
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
+M+ +G PD T SVLT C+ L +L++G I K V NA+I MY +CG
Sbjct: 358 EMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCG 417
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+ A F + D +W +++ GLA +G ++A+++F +M+ +PDDIT++GVLS
Sbjct: 418 CSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLS 477
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
AC+++G+VDQ R +F M++ + ++P HY C+VD+LGR GL+ EA +L R +
Sbjct: 478 ACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEIL---RKMPMN 534
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ VWGALLGA R+HN+ + E+A ++++ELEP+N VY +L +Y C R +D + +
Sbjct: 535 PNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVR 594
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILFDAY 623
++ + +KK PG S I++N H F++GD SH + + L E+ +E F AY
Sbjct: 595 RKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLE----ELAQESTFAAY 649
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 216/506 (42%), Gaps = 63/506 (12%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTY-- 55
+ A LF K+P+ D V WN MI+G+ K + L+ M P+ F +
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 56 ------------------NTVIAGLMQSDNVQG--------------AKEVFDGMEVRDV 83
+ V GL + VQ A+ VFD DV
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKE 139
+WN MISGY +E++ + M V V+ LV+ A + DL + +
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 140 MGARDVASWTIMVNGLVRE----GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
+ + N LV G + A ++F M A+DV +W ++ GY++ G + +A
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA 321
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRN 251
F +M RD SW +I+G + + + ++ F++M E T S+++
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL 381
Query: 252 GLVKEAH---SYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
G ++ +Y++K N N ++ YF+ G A KVF M RD W M+
Sbjct: 382 GSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMV 441
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
GL N G+E +K F QM++ PD+ T+ VL+ C+ +D R+ A+ R
Sbjct: 442 VGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRI 501
Query: 368 QFTTVS-NAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFE 425
+ + V M+ M R G ++ A +P++ + I W +++ H E EL
Sbjct: 502 EPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN-DEPMAELAA 560
Query: 426 RMRLTDFKPDDITFVGVLSACS-YAG 450
+ ++ + +PD+ +L C+ YAG
Sbjct: 561 K-KILELEPDNGAVYALL--CNIYAG 583
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 166/565 (29%), Positives = 287/565 (50%), Gaps = 39/565 (6%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM- 109
+ F + ++ + N++ A+ VFD M R+VV W +++ G+V N A+ VF M
Sbjct: 101 NFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEML 160
Query: 110 ---PLKDVVSWNLVIGALVNCQRMDLAESY----FKEMGARDVASWTIMVNGLVREGRIV 162
V + + V+ A + Q + L + + K D + + + + + GR+
Sbjct: 161 YAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLE 220
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+A K F ++ K+V +W ++ DNG LF +M D+ + + ++
Sbjct: 221 DALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCC 280
Query: 223 IDAAISYFKQMPETCEK--------TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTN 274
++ Q+ C K NS++ + +++G + EAH + +++ +W
Sbjct: 281 EILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNA 340
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+I G+ +M E+ T+D L G E LK F ++ SG PD
Sbjct: 341 MIAGHAQMMEL-----------TKD---------NLSACHRGSEALKLFSKLNLSGMKPD 380
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
T +SVL++CS + ++ G QIHAQ IK VS ++I+MY++CG+I+ A F
Sbjct: 381 LFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFL 440
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+ +I+W S+I G + HG +++AL +FE M L +P+ +TFVGVLSACS+AG+V Q
Sbjct: 441 EMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQ 500
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
YF+ M+ KY ++P HY C+VD+ R G +++A+N + ++ E S +W +
Sbjct: 501 ALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKM---NYEPSEFIWSNFI 557
Query: 515 GACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKK 574
C+ H N+++G A E+++ L+P + Y++L MYLS R ED R+ M+E V K
Sbjct: 558 AGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGK 617
Query: 575 EPGCSWIQINDGGHVFLSGDSSHPK 599
SWI I D + F + +HP+
Sbjct: 618 LKDWSWISIKDKVYSFKTNGKTHPQ 642
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 209/481 (43%), Gaps = 65/481 (13%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMF-TYNTVIAGLMQ 64
+++A+ +FD M +R+ V W ++ G+ +N +A+ +F +M + + T+ A L
Sbjct: 118 MEDARRVFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHA 177
Query: 65 SDNVQGAK--EVFDGMEVRDVVTWNSMISGYVCN-----GLIDEALRVFHGMPLKDVVSW 117
++Q K + F ++ V +++ + +C+ G +++AL+ F + K+V+SW
Sbjct: 178 CSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISW 237
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA---- 173
+ A + F EM A D+ + + + + + +L ++ +
Sbjct: 238 TSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIK 297
Query: 174 ----KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING-----------LV 218
+++ N ++ YL +GC+ A LF +M D + +W +I G L
Sbjct: 298 FGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLS 357
Query: 219 NSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEA---HSYLEKYPY-SNIA 270
R A+ F ++ + K T +S++SV R +++ H+ K + S++
Sbjct: 358 ACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVI 417
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESG 330
T++I Y + G + A K F M+TR + W MI G ++ + ++ L F M +G
Sbjct: 418 VSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAG 477
Query: 331 PSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN------------AMIT 378
P+ TF VL+ CS HA + A N F + M+
Sbjct: 478 VRPNAVTFVGVLSACS-----------HAGMVSQALNYFEIMQKKYKIKPAMDHYECMVD 526
Query: 379 MYARCGNIQSAL---LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
M+ R G ++ AL + + P I W++ I G HG E L + +L KP
Sbjct: 527 MFVRLGRLEQALNFIKKMNYEPSEFI--WSNFIAGCKSHGNLE--LGFYAAEQLLSLKPK 582
Query: 436 D 436
D
Sbjct: 583 D 583
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 69/301 (22%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFL--DN---------AMCLFNQMP- 48
+++ I EA LF++M VTWN MI G+ + L DN A+ LF+++
Sbjct: 315 LKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNL 374
Query: 49 ---ERDMFTYNTVIA---------------------GLM--------------QSDNVQG 70
+ D+FT ++V++ G + + +++
Sbjct: 375 SGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIER 434
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVN 126
A + F M R ++ W SMI+G+ +G+ +AL +F M L V V++ V+ A +
Sbjct: 435 ASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSH 494
Query: 127 CQRMDLAESYFKEMGAR-----DVASWTIMVNGLVREGRIVEARKLFDKM---PAKDVQA 178
+ A +YF+ M + + + MV+ VR GR+ +A KM P++ +
Sbjct: 495 AGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFI-- 552
Query: 179 WNLMIAGYLDNGCVGV----AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
W+ IAG +G + + AE L + +D ++ L+N +++ R + K M
Sbjct: 553 WSNFIAGCKSHGNLELGFYAAEQLLS-LKPKDPETYVLLLNMYLSAERFEDVSRVRKMME 611
Query: 235 E 235
E
Sbjct: 612 E 612
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 80/180 (44%), Gaps = 5/180 (2%)
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+ +L C D + + +H +K + V + ++ +YA+CGN++ A F ++
Sbjct: 70 YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
++++W +++ G + + A+ +F+ M P T VL ACS + G
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGD- 188
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
F KY + ++ + + L + G +++A+ + IR + W + + AC
Sbjct: 189 QFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNV----ISWTSAVSAC 244
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 147/372 (39%), Gaps = 44/372 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
+ R+++A F ++ +++ ++W + NG + LF +M D+ FT +
Sbjct: 215 KCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTS 274
Query: 58 VIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++ + +++ +V+ G E ++ NS++ Y+ +G I EA R+F+ M
Sbjct: 275 ALSQCCEILSLELGTQVYSLCIKFGYE-SNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDA 333
Query: 113 DVVSWNLVIGA-----------LVNCQRMDLAESYFKEMGARDVASWTIMVNGL------ 155
+V+WN +I L C R A F ++ + ++ +
Sbjct: 334 SMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSR 393
Query: 156 ---VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
+ +G + A+ + + DV +I+ Y G + A F +M R + +W
Sbjct: 394 MLAIEQGEQIHAQTIKTGFLS-DVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTS 452
Query: 213 LINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGLVKEAHSYLE----KY 264
+I G A+ F+ M + T+ ++S G+V +A +Y E KY
Sbjct: 453 MITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKY 512
Query: 265 PYSNIASWTNVIVGYF-EMGEVGSAIKVFELMTTRDVT-VWNVMIFGL---GENDLGEEG 319
+V F +G + A+ + M +W+ I G G +LG
Sbjct: 513 KIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYA 572
Query: 320 LKFFVQMKESGP 331
+ + +K P
Sbjct: 573 AEQLLSLKPKDP 584
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 179/650 (27%), Positives = 316/650 (48%), Gaps = 70/650 (10%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------------------ 50
A+ +FD MP+R+ V W +I Y + G + A LF++M +
Sbjct: 123 ARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSE 182
Query: 51 ------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISG 92
D+ N++++ + N++ ++++FD M+ RD+V+WNS++S
Sbjct: 183 LAHVQCLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSA 242
Query: 93 YVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV 152
Y G I E L + M ++ G++++ AS +
Sbjct: 243 YAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSV-----------------AASRGELK 285
Query: 153 NGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
G G+I+ R FD D +I YL G + +A +F++ D+D+ W
Sbjct: 286 LGRCLHGQIL--RTCFDL----DAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTA 339
Query: 213 LINGLVNSRRIDAAISYFKQM----PETCEKTWNSIISVLIRNG---LVKEAHSYLEKYP 265
+I+GLV + D A++ F+QM ++ T S+I+ + G L H Y+ ++
Sbjct: 340 MISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMFRHE 399
Query: 266 YS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
+IA+ +++ + + G + + VF+ M R++ WN MI G +N + L F
Sbjct: 400 LPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFN 459
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
+M+ +PD+ T S+L C+ L LG+ IH+ I+ V +++ MY +CG
Sbjct: 460 EMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCG 519
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
++ A F+ +P HD++SW++II G YHG E AL + + + KP+ + F+ VLS
Sbjct: 520 DLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLS 579
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
+CS+ GLV+QG ++ M + + P H+ CVVDLL R G ++EA NL + +D +
Sbjct: 580 SCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEEAYNLYKKKFSDPVL 639
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
V G +L ACR + N ++G+ ++ L+P ++G ++ L Y S + E+ +
Sbjct: 640 ---DVLGIILDACRANGNNELGDTIANDILMLKPMDAGNFVQLAHCYASINKWEEVGEAW 696
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
M+ G+KK PG S+I I+ F + +SHP+F + L L E+
Sbjct: 697 THMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEIVCTLKFLRKEM 746
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 136/508 (26%), Positives = 228/508 (44%), Gaps = 29/508 (5%)
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG 141
D +S+I+ Y G D A +VF MP ++VV W +IG R+ A S F EM
Sbjct: 103 DAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMR 162
Query: 142 ARDV-ASWTIMVNGLVREGRIVEARKLFDKMP----AKDVQAWNLMIAGYLDNGCVGVAE 196
+ + S M++ L + + L D+ N M++ Y + +
Sbjct: 163 RQGIQPSSVTMLSLLFGVSELAHVQCLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSR 222
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIRNG 252
LF M RDL SW L++ I + K M E +T+ S++SV G
Sbjct: 223 KLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRG 282
Query: 253 LVKEA---HSYLEKYPYSNIASW-TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIF 308
+K H + + + A T++IV Y + G + A ++FE +DV +W MI
Sbjct: 283 ELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMIS 342
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
GL +N ++ L F QM + G AT SV+T C+ L + +LG +H +
Sbjct: 343 GLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMFRHELPM 402
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
N+++TM+A+CG++ + + F + +++SWN++I G A +GY KAL LF MR
Sbjct: 403 DIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMR 462
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFD-CMKNKYFLQPRSAHYTCVVDLLGRFGL 487
PD IT V +L C+ G + G++ ++N L+P T +VD+ + G
Sbjct: 463 SDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNG--LRPCILVDTSLVDMYCKCGD 520
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME--LEPNNSGVYL 545
+D A N++ + + W A++ H + + +E ++PN ++
Sbjct: 521 LDIAQRCFNQMPSHDL----VSWSAIIVGYGYHGKGETALRFYSKFLESGMKPN----HV 572
Query: 546 ILTEMYLSC---GRREDAKRIFAQMKEN 570
I + SC G E I+ M +
Sbjct: 573 IFLSVLSSCSHNGLVEQGLNIYESMTRD 600
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 185/434 (42%), Gaps = 75/434 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTV--- 58
I+ ++ LFD M QRD V+WN ++ Y + G++ + L M E D T+ +V
Sbjct: 218 IEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSV 277
Query: 59 --------------------------------IAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
I ++ N+ A +F+ +DVV W
Sbjct: 278 AASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLW 337
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRM---DLAES----YFK 138
+MISG V NG D+AL VF M V S + +++ C ++ +L S F+
Sbjct: 338 TAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMFR 397
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
D+A+ +V + G + ++ +FDKM +++ +WN MI GY NG V A L
Sbjct: 398 HELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFL 457
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
F +M T I L+ + K W I S +IRNGL
Sbjct: 458 FNEMRSDHQTPDSITIVSLLQGCASTGQLHLGK---------W--IHSFVIRNGL----- 501
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
I T+++ Y + G++ A + F M + D+ W+ +I G G + GE
Sbjct: 502 -------RPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGET 554
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK---IARNQFTTVSNA 375
L+F+ + ESG P++ F SVL+ CS ++ G I+ + IA N
Sbjct: 555 ALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPN--LEHHAC 612
Query: 376 MITMYARCGNIQSA 389
++ + +R G ++ A
Sbjct: 613 VVDLLSRAGRVEEA 626
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 139/319 (43%), Gaps = 56/319 (17%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----------- 49
++ I A +F++ +D V W MI G +NG D A+ +F QM +
Sbjct: 314 LKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMA 373
Query: 50 ----------------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
D+ T N+++ + ++ + VFD M R
Sbjct: 374 SVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKR 433
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAE--- 134
++V+WN+MI+GY NG + +AL +F+ M D ++ ++ + ++ L +
Sbjct: 434 NLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIH 493
Query: 135 SYFKEMGARD-VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
S+ G R + T +V+ + G + A++ F++MP+ D+ +W+ +I GY +G
Sbjct: 494 SFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGE 553
Query: 194 VAEDLFQKMHDRDLTS----WKQLINGLVNSRRIDAAISYFKQMPETCEKTWN-----SI 244
A + K + + + +++ ++ ++ ++ ++ M N +
Sbjct: 554 TALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACV 613
Query: 245 ISVLIRNGLVKEAHSYLEK 263
+ +L R G V+EA++ +K
Sbjct: 614 VDLLSRAGRVEEAYNLYKK 632
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 119/306 (38%), Gaps = 38/306 (12%)
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
+ +N +I + L + M ++ D TF S+L CS L LG +H
Sbjct: 34 INSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQ 93
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
+ + + +++++I YA+ G A F +P +++ W SII + G +
Sbjct: 94 RILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPE 153
Query: 420 ALELFERMRLTDFKPDDITFVGVL--------------SACSYAGLVD------------ 453
A LF+ MR +P +T + +L SA Y + D
Sbjct: 154 AFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCLHGSAILYGFMSDINLSNSMLSMYG 213
Query: 454 ------QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
R FD M + + + +V + G I E + LL +R G E P
Sbjct: 214 KCRNIEYSRKLFDYMDQRDLVS-----WNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDP 268
Query: 508 TVWGALLGACRIHNNIKVGE-IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
+G++L +K+G + G+ + ++ V L MYL G + A R+F +
Sbjct: 269 QTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFER 328
Query: 567 MKENGV 572
+ V
Sbjct: 329 SLDKDV 334
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 155/475 (32%), Positives = 262/475 (55%), Gaps = 15/475 (3%)
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
GA+ ++ A F ++ D+ W M+ G + + L+ +M + V+
Sbjct: 55 GAMTISGAINYAHQVFAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKF 114
Query: 182 MIAGYLDNGCVG---------VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
+ +L GC V + + + + LI N + A S F
Sbjct: 115 TFS-FLLKGCTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYD 173
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
+PE +W+++ + R G + A ++ P ++ SW +I GY + GE+ +A +F
Sbjct: 174 LPERSVVSWSALTAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLF 233
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ +DV WN MI G + L+ F +M+ G PD T S+L+ C+DL L
Sbjct: 234 DEAPEKDVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQ 293
Query: 353 LGRQIHAQAIKIARNQFTT-VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
+GR++H ++ R + + NA++ MYA+CG+I+ AL F + D+ +WNS+I GL
Sbjct: 294 VGRKLHCSISEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGL 353
Query: 412 AYHGYAEKALELFERMR-LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
A+HG+AE++++LF M+ L + KP++ITFVGV+ ACS+AG V++GR YF M+ +Y ++P
Sbjct: 354 AFHGHAEESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEP 413
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAG 530
H+ C+VDLLGR GL+ EA L+ ++ IE + +W LLGACR+H N+++G +A
Sbjct: 414 NMIHHGCMVDLLGRAGLLSEAFELIAKME---IEPNAIIWRTLLGACRVHGNVELGRLAN 470
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIND 585
ER+++L + SG Y++L+ +Y S G + A+ + M + GV+KE G S I+ +D
Sbjct: 471 ERLLKLRRDESGDYVLLSNIYASAGEWDGAEEVRKLMDDGGVRKEAGRSLIEADD 525
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 205/429 (47%), Gaps = 34/429 (7%)
Query: 34 NGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR----DVVTWNSM 89
+G ++ A +F Q+ E D+F +NT++ G QS N ++ ME R D T++ +
Sbjct: 60 SGAINYAHQVFAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFL 119
Query: 90 ISGYVCNGL-IDEALRVFHGMPLK---DVVSW--NLVIGALVNCQRMDLAESYFKEMGAR 143
+ G C L + HG LK +V S+ N +I NC + +A S F ++ R
Sbjct: 120 LKG--CTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPER 177
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
V SW+ + G R G + AR++FD+MP KD+ +WN+MI GY+ NG + A LF +
Sbjct: 178 SVVSWSALTAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAP 237
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPET--C--EKTWNSIISVLIRNG---LVKE 256
++D+ +W +I G V A+ F++M C E T S++S G + ++
Sbjct: 238 EKDVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRK 297
Query: 257 AHSYLEKYPYSNIASWT-NVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
H + + +++ N +V Y + G + A++VF+ M +DVT WN +I GL +
Sbjct: 298 LHCSISEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHG 357
Query: 315 LGEEGLKFFVQMKE-SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
EE +K F +M+ P+ TF V+ CS ++ GR+ K+ R ++
Sbjct: 358 HAEESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRY----FKLMRERYDIEP 413
Query: 374 N-----AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERM 427
N M+ + R G + A + + I + I W +++ HG E L
Sbjct: 414 NMIHHGCMVDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVE--LGRLANE 471
Query: 428 RLTDFKPDD 436
RL + D+
Sbjct: 472 RLLKLRRDE 480
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 190/437 (43%), Gaps = 62/437 (14%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
I A +F ++ + D WN M+RG ++ + L+ QM R D FT++ ++ G
Sbjct: 63 INYAHQVFAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKG 122
Query: 62 LMQSD------NVQG-----------------------------AKEVFDGMEVRDVVTW 86
+ + V G A+ +F + R VV+W
Sbjct: 123 CTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSW 182
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA 146
+++ +GY G + A ++F MP+KD+VSWN++I V M+ A + F E +DV
Sbjct: 183 SALTAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVV 242
Query: 147 SWTIMVNGLVREGRIVEARKLFDKM----PAKDVQAWNLMIAGYLDNGCVGVAEDL---F 199
+W M+ G V G +A ++F++M D +++ D G + V L
Sbjct: 243 TWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSI 302
Query: 200 QKMHDRDLTSW--KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
+M DL+ L++ I+ A+ FK+M E TWNS+I L +G +E+
Sbjct: 303 SEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEES 362
Query: 258 -HSYLEKYPYSNIA----SWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+ E NI ++ VIV G V + F+LM R N++ G
Sbjct: 363 IKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMV 422
Query: 313 NDLGEEGL--KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ-- 368
+ LG GL + F + + P+ + ++L C ++LGR + + +K+ R++
Sbjct: 423 DLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDESG 482
Query: 369 -FTTVSNAMITMYARCG 384
+ +SN +YA G
Sbjct: 483 DYVLLSN----IYASAG 495
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%), Gaps = 18/220 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R + A+ +FD+MP +D V+WNVMI GY KNG ++NA LF++ PE+D+ T+NT+IAG
Sbjct: 191 RRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAG 250
Query: 62 LMQSDNVQGAKEVFDGM----EVRDVVTWNSMISGYVCNGLID-EALRVFH----GMPLK 112
+ + A E+F+ M E D VT S++S C L D + R H M
Sbjct: 251 YVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSA--CADLGDLQVGRKLHCSISEMTRG 308
Query: 113 D--VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDK 170
D V+ N ++ C +++A FK+M +DV +W ++ GL G E+ KLF +
Sbjct: 309 DLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAE 368
Query: 171 MPA-KDVQAWNLMIAGYL----DNGCVGVAEDLFQKMHDR 205
M A K+++ + G + G V F+ M +R
Sbjct: 369 MQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRER 408
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYN 56
++N ++ A+ LFD+ P++D VTWN MI GY G A+ +F +M D T
Sbjct: 221 VKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTML 280
Query: 57 TVIAGLMQSDNVQGAKEV---FDGMEVRD--VVTWNSMISGYVCNGLIDEALRVFHGMPL 111
++++ ++Q +++ M D V+ N+++ Y G I+ AL+VF M
Sbjct: 281 SLLSACADLGDLQVGRKLHCSISEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMRE 340
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEMGA-RDVASWTIMVNGLV----REGRIVEARK 166
KDV +WN VIG L + + F EM A +++ I G++ G + E R+
Sbjct: 341 KDVTTWNSVIGGLAFHGHAEESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRR 400
Query: 167 LFDKM 171
F M
Sbjct: 401 YFKLM 405
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 176/554 (31%), Positives = 282/554 (50%), Gaps = 35/554 (6%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD--------VVSWNLVIG 122
A+ VFD M VRD V WN++++GY NGL A+ + M ++ +VS
Sbjct: 113 ARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACA 172
Query: 123 ALVNCQRMDLAESYFKEMGARDVAS-WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
A ++ G ++ + T +++ + G I AR +FD MP K+ +WN
Sbjct: 173 NARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNA 232
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
MI GY NG A LF +M + + V + AA+ ++ C
Sbjct: 233 MIDGYAQNGDSREALALFNRMVEEGVD---------VTDVSVLAALQACGEL--GCLDEG 281
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
+ +L+R GL SN++ +I Y + V A VF+ + R
Sbjct: 282 MRVHELLVRIGL------------DSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQV 329
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN MI G +N E+ ++ F +M+ PD+ T SV+ +D+ R IH +
Sbjct: 330 SWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYS 389
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
I++ +Q V A+I MYA+CG + A + F+S +I+WN++I G HG+ + A+
Sbjct: 390 IRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAV 449
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
ELFE M+ P++ TF+ VLSACS+AGLVD+GR YF MK Y L+P HY +VDL
Sbjct: 450 ELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDL 509
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LGR G +DEA + ++ D +V+GA+LGAC++H N+++ E + +++ EL P
Sbjct: 510 LGRAGKLDEAWAFIQKMPMDP---GLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEG 566
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFH 601
+++L +Y + +D R+ M++NG++K PG S IQ+ + H F SG ++H +
Sbjct: 567 VYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAK 626
Query: 602 RLRYLLNLLHTEIE 615
+ L L EI+
Sbjct: 627 EIYSRLAKLIEEIK 640
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 173/400 (43%), Gaps = 71/400 (17%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVI 59
R +A+ +FD+MP RD V WN ++ GY +NG AM + +M E D T +V+
Sbjct: 109 RPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVL 168
Query: 60 ---------------------AGLMQSDNV--------------QGAKEVFDGMEVRDVV 84
+GL + NV + A+ VFD M ++ V
Sbjct: 169 PACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSV 228
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMDLAESYFK--EMG 141
+WN+MI GY NG EAL +F+ M + V V+ V+ AL C + + + E+
Sbjct: 229 SWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELL 288
Query: 142 AR-----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
R +V+ ++ + R+ A +FD++ + +WN MI G NGC A
Sbjct: 289 VRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAV 348
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
LF +M QL N +S + + I + + + W S+ +
Sbjct: 349 RLFTRM---------QLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRL------- 392
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
+L++ Y T +I Y + G V A +F R V WN MI G G + G
Sbjct: 393 ---HLDQDVY----VLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFG 445
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+ ++ F +MK G P+ TF SVL+ CS +D GR+
Sbjct: 446 KAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE 485
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 157/352 (44%), Gaps = 65/352 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------------- 50
I+ A+ +FD MP +++V+WN MI GY +NG A+ LFN+M E
Sbjct: 212 IRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQA 271
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
++ N +I + V A VFD ++ R V+W
Sbjct: 272 CGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSW 331
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVV--SWNL--VIGALVNCQRMDLAESYFKEMGA 142
N+MI G NG ++A+R+F M L++V S+ L VI AL + L +
Sbjct: 332 NAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISD-PLQARWIHGYSI 390
Query: 143 R-----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
R DV T +++ + GR+ AR LF+ + V WN MI GY +G A +
Sbjct: 391 RLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVE 450
Query: 198 LFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVL 248
LF++M + T++ +++ ++ +D YF M E + + +++ +L
Sbjct: 451 LFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLL 510
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGY------FEMGEVGSAIKVFEL 294
R G + EA ++++K P S ++G E+ E SA K+FEL
Sbjct: 511 GRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAE-ESAQKIFEL 561
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 122/294 (41%), Gaps = 58/294 (19%)
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L FV M +G P TFTS+L +C+ L GR +HAQ + + A+
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF-KPDDI 437
MYA+C A F +P+ D ++WN+++ G A +G A A+E+ RM+ + +PD I
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 438 TFVGVL-------------SACSYA----------------------GLVDQGRYYFDCM 462
T V VL A ++A G + R FD M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
K S + ++D + G EA+ L N + +G++V+ A L AC
Sbjct: 223 PTK-----NSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQAC----- 272
Query: 523 IKVGEIA----GERVMEL-----EPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
GE+ G RV EL +N V L MY C R + A +F ++
Sbjct: 273 ---GELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDEL 323
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 151/474 (31%), Positives = 262/474 (55%), Gaps = 11/474 (2%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
++N + G++ A LF MP K++ + N++I GY +G A +F +M +R++ +W
Sbjct: 93 LLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATW 152
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR-----NGLV--KEAHSYLEK 263
++ GL+ + + F +M E + ++R LV ++ H Y+ K
Sbjct: 153 NAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRK 212
Query: 264 YPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ N+ +++ Y + G +G ++ M +++V WN +I G +N EE L
Sbjct: 213 CGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQ 272
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
+ MK +G PD TF SV++ CS+L TL G+QIHA+ IK + +V +++I+MY+R
Sbjct: 273 YNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSR 332
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CG ++ +L F D++ W+S+I +HG +A++LF +M + +D+TF+ +
Sbjct: 333 CGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSL 392
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
L ACS+ GL ++G +FD M KY ++PR HYTC+VDLLGR+G ++EA L IR+
Sbjct: 393 LYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEAL---IRSMP 449
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
++ W LL AC+IH ++ E V L+P + Y++L+ ++ S R +D
Sbjct: 450 VKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSD 509
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
+ M++ +KKEPG SW+++ + H F GD SHPK + L L +E+++
Sbjct: 510 VRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKK 563
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 147/306 (48%), Gaps = 30/306 (9%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
N ++++ + G + A + P NI S +I GYF G+ +A K+F+ M R+V
Sbjct: 91 NHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVA 150
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN M+ GL + + EEGL F +M E G PD SVL C+ L L GRQ+H
Sbjct: 151 TWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYV 210
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
K V +++ MY +CG++ ++P ++++WN++I G A +GY E+ L
Sbjct: 211 RKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVL 270
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR-----------------------YY 458
+ + M++ F+PD ITFV V+S+CS + QG+ Y
Sbjct: 271 DQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMY 330
Query: 459 FDC----MKNKYFLQPRSAHYTCVVDLLGRFGLID---EAMNLLNEIRADGIEVSPTVWG 511
C K FL+ + C ++ +G EA++L N++ + +E + +
Sbjct: 331 SRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFL 390
Query: 512 ALLGAC 517
+LL AC
Sbjct: 391 SLLYAC 396
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 187/435 (42%), Gaps = 42/435 (9%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME 79
D N ++ Y K G LD A+ LF MP +++ + N +I G +S + A+++FD M
Sbjct: 86 DKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMP 145
Query: 80 VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDL------ 132
R+V TWN+M++G + +E L +F M + +G+++ C +
Sbjct: 146 ERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQ 205
Query: 133 AESYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
Y ++ G ++ + + + ++ G + E +L MP+++V AWN +IAG NG
Sbjct: 206 VHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGY 265
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN 251
D + M K +++S A + +Q+ K S+I +I
Sbjct: 266 PEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVI-- 323
Query: 252 GLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
+++I Y G + ++KVF DV W+ MI G
Sbjct: 324 ---------------------SSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYG 362
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ-----IHAQAIKIAR 366
+ G E + F QM++ ++ TF S+L CS + G + + +K
Sbjct: 363 FHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRL 422
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFE 425
+T M+ + R G+++ A S+P+ D+I+W +++ H E A + E
Sbjct: 423 EHYT----CMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISE 478
Query: 426 RMRLTDFKPDDITFV 440
+ D + D + +V
Sbjct: 479 EVFRLDPR-DPVPYV 492
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 31/154 (20%)
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+ + F+ +L C +L LG+Q+H+ I + +SN ++ +Y++CG + +A+ F
Sbjct: 51 EPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLF 110
Query: 394 SSVPIHDIIS-------------------------------WNSIICGLAYHGYAEKALE 422
+P +I+S WN+++ GL + E+ L
Sbjct: 111 GVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLG 170
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
LF RM F PD+ VL C+ + GR
Sbjct: 171 LFSRMNELGFLPDEFALGSVLRGCAGLRALVAGR 204
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 49/234 (20%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYN 56
M+ + E + L MP ++ V WN +I G +NG+ + + +N M D T+
Sbjct: 230 MKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFV 289
Query: 57 TVI------AGLMQSDNVQG-----------------------------AKEVFDGMEVR 81
+VI A L Q + + +VF E
Sbjct: 290 SVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENG 349
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQRMDLAESYFK-- 138
DVV W+SMI+ Y +G EA+ +F+ M + + + ++ + L C L E K
Sbjct: 350 DVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFF 409
Query: 139 -----EMGARD-VASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAG 185
+ G + + +T MV+ L R G + EA L MP K DV W +++
Sbjct: 410 DLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSA 463
>gi|302822699|ref|XP_002993006.1| hypothetical protein SELMODRAFT_136306 [Selaginella moellendorffii]
gi|300139206|gb|EFJ05952.1| hypothetical protein SELMODRAFT_136306 [Selaginella moellendorffii]
Length = 579
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 274/551 (49%), Gaps = 49/551 (8%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A + D+MPQ + VTW MI+ G L A +F +MPER++ ++NT++A Q +
Sbjct: 72 AHQVLDRMPQLNVVTWTTMIQACVDQGHLGPAKDIFTRMPERNVVSWNTMVAANFQLGDF 131
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCN--GLIDEALRVFHGMPLKDVVSWNLVIGALVN 126
GAK F+ M DVV+WN+++S + G+I++AL F ++D+V+WN +I A +
Sbjct: 132 AGAKSTFNRMPKHDVVSWNAVVSAHAHGREGMIEQALAAFGSYHVRDLVTWNAMIQAFAH 191
Query: 127 CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
C +D A+ YF+ M RD SW M+ +G + EA +LF +MP ++ W ++ +
Sbjct: 192 CGHLDQAKEYFERMPERDCVSWNTMIQAYANDGCVEEANRLFRRMPEPNLLTWTSLLVAF 251
Query: 187 LDNGCVGVAEDLF-QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
NG V AE +F +M + D + ++ ++ + A + F + E +WNSI+
Sbjct: 252 AQNGNVAGAETIFFARMPEWDAVACNAMVALYADAGCLARAAAMFDSLKERSMASWNSIV 311
Query: 246 SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNV 305
+NG + A ++ P ++ SW ++ G + ++F+ + DV N+
Sbjct: 312 QAHAQNGEYEGAKEMFDRMPCHDMVSWNTLLAAAIHSGSIDLVERLFDALPEPDVVSCNI 371
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
+I E L E+ + F +M E +++T+
Sbjct: 372 VIVTFAEQGLIEKAERLFRRMSE----------WNIVTV--------------------- 400
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH---GYAEKALE 422
NAM+ YA+CG ++ A +S +P +++SWN+++ G G+ A E
Sbjct: 401 --------NAMVAAYAQCGRMEQAKELWSKMPEQNVVSWNALVAGYGQKRNFGHYSDAFE 452
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLL 482
L M L P+D++F+ +L+AC++ GL+ + R Y M + + L+P HY +D+
Sbjct: 453 LLHSMGLESVLPNDVSFLIILNACAHKGLLREARSYLAAMAD-HGLKPCIEHYCIFIDVF 511
Query: 483 GRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG 542
G+ G ++ A L + G VS WG+L GAC +H +++ G A + E+ P ++
Sbjct: 512 GKVGQLENASELAGCMPFQGDGVS---WGSLAGACGLHRSVRHGAGAAKLACEMAPKSAA 568
Query: 543 VYLILTEMYLS 553
Y+ L +Y +
Sbjct: 569 SYVSLANLYAA 579
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 218/485 (44%), Gaps = 63/485 (12%)
Query: 93 YVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV 152
Y G I +A VF G+ + SWN ++ A C +DLA+S F M RDV SWT ++
Sbjct: 2 YSSCGSIRDAQIVFEGICKPSICSWNTMVSAYAQCGHVDLAKSLFDTMPHRDVVSWTALL 61
Query: 153 NGLVREGRIVE-ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
+ V G I A ++ D+MP +V W MI +D G +G A+D+F +M +R++ SW
Sbjct: 62 HAFV--GSITTMAHQVLDRMPQLNVVTWTTMIQACVDQGHLGPAKDIFTRMPERNVVSWN 119
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI--RNGLVKEAHSYLEKYPYSNI 269
++ A S F +MP+ +WN+++S R G++++A + Y ++
Sbjct: 120 TMVAANFQLGDFAGAKSTFNRMPKHDVVSWNAVVSAHAHGREGMIEQALAAFGSYHVRDL 179
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
+W +I + G + A + FE M RD WN MI + EE + F +M
Sbjct: 180 VTWNAMIQAFAHCGHLDQAKEYFERMPERDCVSWNTMIQAYANDGCVEEANRLFRRM--- 236
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR-NQFTTVS-NAMITMYARCGNIQ 387
P P+ T+TS+L + G A+ I AR ++ V+ NAM+ +YA G +
Sbjct: 237 -PEPNLLTWTSLL-----VAFAQNGNVAGAETIFFARMPEWDAVACNAMVALYADAGCLA 290
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
A F S+ + SWNSI+ A +G E A E+F+RM D +++ +L+A
Sbjct: 291 RAAAMFDSLKERSMASWNSIVQAHAQNGEYEGAKEMFDRMPCHDM----VSWNTLLAAAI 346
Query: 448 YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
++G +D FD + +P V+ GLI++A L +
Sbjct: 347 HSGSIDLVERLFDALP-----EPDVVSCNIVIVTFAEQGLIEKAERLFRRM--------- 392
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ W N + V + Y CGR E AK ++++M
Sbjct: 393 SEW----------NIVTVNA-------------------MVAAYAQCGRMEQAKELWSKM 423
Query: 568 KENGV 572
E V
Sbjct: 424 PEQNV 428
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 144/296 (48%), Gaps = 39/296 (13%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
+ +A+ F++MP+RD V+WN MI+ Y +G ++ A LF +MPE ++ T+ +++ Q
Sbjct: 194 HLDQAKEYFERMPERDCVSWNTMIQAYANDGCVEEANRLFRRMPEPNLLTWTSLLVAFAQ 253
Query: 65 SDNVQGAKEVF--------------------------------DGMEVRDVVTWNSMISG 92
+ NV GA+ +F D ++ R + +WNS++
Sbjct: 254 NGNVAGAETIFFARMPEWDAVACNAMVALYADAGCLARAAAMFDSLKERSMASWNSIVQA 313
Query: 93 YVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV 152
+ NG + A +F MP D+VSWN ++ A ++ +DL E F + DV S I++
Sbjct: 314 HAQNGEYEGAKEMFDRMPCHDMVSWNTLLAAAIHSGSIDLVERLFDALPEPDVVSCNIVI 373
Query: 153 NGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQ 212
+G I +A +LF +M ++ N M+A Y G + A++L+ KM ++++ SW
Sbjct: 374 VTFAEQGLIEKAERLFRRMSEWNIVTVNAMVAAYAQCGRMEQAKELWSKMPEQNVVSWNA 433
Query: 213 LINGLVNSRRIDAAISYFKQMPET-CEKTWNSIISVLI------RNGLVKEAHSYL 261
L+ G R F+ + E + +S LI GL++EA SYL
Sbjct: 434 LVAGYGQKRNFGHYSDAFELLHSMGLESVLPNDVSFLIILNACAHKGLLREARSYL 489
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 139/277 (50%), Gaps = 12/277 (4%)
Query: 2 RNARIQEAQNLF-DKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+N + A+ +F +MP+ D V N M+ Y G L A +F+ + ER M ++N+++
Sbjct: 253 QNGNVAGAETIFFARMPEWDAVACNAMVALYADAGCLARAAAMFDSLKERSMASWNSIVQ 312
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
Q+ +GAKE+FD M D+V+WN++++ + +G ID R+F +P DVVS N+V
Sbjct: 313 AHAQNGEYEGAKEMFDRMPCHDMVSWNTLLAAAIHSGSIDLVERLFDALPEPDVVSCNIV 372
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I ++ AE F+ M ++ + MV + GR+ +A++L+ KMP ++V +WN
Sbjct: 373 IVTFAEQGLIEKAERLFRRMSEWNIVTVNAMVAAYAQCGRMEQAKELWSKMPEQNVVSWN 432
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDL-------TSWKQLINGLVNSRRIDAAISYFKQM 233
++AGY G D F+ +H L S+ ++N + + A SY M
Sbjct: 433 ALVAGYGQKRNFGHYSDAFELLHSMGLESVLPNDVSFLIILNACAHKGLLREARSYLAAM 492
Query: 234 PE----TCEKTWNSIISVLIRNGLVKEAHSYLEKYPY 266
+ C + + I V + G ++ A P+
Sbjct: 493 ADHGLKPCIEHYCIFIDVFGKVGQLENASELAGCMPF 529
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 11/183 (6%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+ + I + LFD +P+ D V+ N++I + + G ++ A LF +M E ++ T N ++A
Sbjct: 346 IHSGSIDLVERLFDALPEPDVVSCNIVIVTFAEQGLIEKAERLFRRMSEWNIVTVNAMVA 405
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCN---GLIDEALRVFHGMPLKDV--- 114
Q ++ AKE++ M ++VV+WN++++GY G +A + H M L+ V
Sbjct: 406 AYAQCGRMEQAKELWSKMPEQNVVSWNALVAGYGQKRNFGHYSDAFELLHSMGLESVLPN 465
Query: 115 -VSWNLVIGALVNCQRMDLAESYFKEMGARD----VASWTIMVNGLVREGRIVEARKLFD 169
VS+ +++ A + + A SY M + + I ++ + G++ A +L
Sbjct: 466 DVSFLIILNACAHKGLLREARSYLAAMADHGLKPCIEHYCIFIDVFGKVGQLENASELAG 525
Query: 170 KMP 172
MP
Sbjct: 526 CMP 528
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 181/667 (27%), Positives = 326/667 (48%), Gaps = 61/667 (9%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDN 67
A +FD+MP ++T++ N+MI G+ K G L A LF+ M ER ++ +I G +QS+
Sbjct: 61 HAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQ 120
Query: 68 VQGAKEVFDGMEV----RDVVTWNSMISGY----VCNGLIDEALRVFHGMPLKDVVSWNL 119
+ A ++ M D VT +++SG+ N ++ V +++ N
Sbjct: 121 SKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNS 180
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++ A + LA FK M +D ++ ++ G EG EA +LF ++ ++
Sbjct: 181 LVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPS 240
Query: 180 NLMIAGYLDNGCVGVAEDLF-QKMHDRDLTS---WKQLI-NGLVN----SRRIDAAISYF 230
+ A L + VG+ + F Q++H L + W + N L++ ++D F
Sbjct: 241 DFTFAALL-SAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLF 299
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEK----------YPYSNIASWTN------ 274
+MPE ++N +I+ NG KE+ K +P++ + S
Sbjct: 300 XEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLR 359
Query: 275 ---------VIVG--------------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
+ VG Y + A K+F+ + + W MI
Sbjct: 360 MGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYV 419
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+ EEG+ F M+ +G D ATF S+L C++L ++ LGRQ+H+ I+
Sbjct: 420 QKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVY 479
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
+A++ YA+CG + A+ F +P + +SWN++I A +G + L F++M +
Sbjct: 480 SGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSG 539
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
+KPD ++F+ VLSACS+ G V++ ++F+ M Y + P+ HYT +VD+L R G DEA
Sbjct: 540 YKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEA 599
Query: 492 MNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP-NNSGVYLILTEM 550
L+ E+ E S +W ++L +CRIH N ++ + A +R+ +E ++ Y+ ++ +
Sbjct: 600 EKLMTEM---PFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNI 656
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
Y G+ ++ ++ M++ GV+K P SW++I HVF + D SHP+ ++ +N L
Sbjct: 657 YAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINAL 716
Query: 611 HTEIERE 617
E+E++
Sbjct: 717 SKEMEKK 723
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 205/458 (44%), Gaps = 41/458 (8%)
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
VN + G +V A ++FD+MPAK+ + N+MI+G+L G + A +LF M +R SW
Sbjct: 50 VNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWT 109
Query: 212 QLINGLVNSRRIDAAISYFKQMPE-TCEKTWNSIISVLIRNG------LVKEAHSYLEKY 264
LI G + S + A + M E + +++++L G ++ + H+++ K
Sbjct: 110 ILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKL 169
Query: 265 PYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
Y N+ +++ Y + + A ++F+ M +D +N ++ G L EE ++ F
Sbjct: 170 GYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF 229
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
+++ SG P + TF ++L+ L G+Q+H +K V NA++ Y++
Sbjct: 230 LELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKH 289
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
+ F +P D IS+N +I A++G +++ +LF +++ T F F +L
Sbjct: 290 DQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLL 349
Query: 444 SACSYAGLVDQGR-----------------------YYFDCMKNKYFLQ-------PRSA 473
S + + + GR Y C +K + +
Sbjct: 350 SIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTV 409
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV 533
+T ++ + G +E +N+ +++R G+ + ++L AC +I +G +
Sbjct: 410 PWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLL 469
Query: 534 MELEPNNSGVY--LILTEMYLSCGRREDAKRIFAQMKE 569
+ S VY L + Y CG DA + F +M E
Sbjct: 470 IR-SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPE 506
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 167/398 (41%), Gaps = 36/398 (9%)
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
LFQ + R+ + K +N ++ IDA I P TC + ++ + G + A
Sbjct: 8 LFQNLVLRNSPAPKPSLN---SNHLIDAHIVKTGFNPNTCRSNFQ--VNNFLERGDLVHA 62
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
H ++ P N S +I G+ + G++ A ++F+ M R W ++I G +++ +
Sbjct: 63 HQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSK 122
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E + + M+ G PD T ++L+ +L T ++ QIH IK+ V N+++
Sbjct: 123 EAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLV 182
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
Y + + A F + D +++NS++ G + G E+A+ELF + + KP D
Sbjct: 183 DAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDF 242
Query: 438 TFVGVLSAC----------SYAGLVDQGRYYFDCMKNKYFLQPRSAH------------- 474
TF +LSA G V + + ++ L S H
Sbjct: 243 TFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEM 302
Query: 475 -------YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
Y V+ G E+ +L +++ + + LL N+++G
Sbjct: 303 PELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGR 362
Query: 528 IAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIF 564
+ + + N S V L +MY C ++A++IF
Sbjct: 363 QIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIF 400
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 318/638 (49%), Gaps = 45/638 (7%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFT--YNTVIAGLMQSD 66
A++ FD + RD WN+MI GY + G + F+ T Y T + L
Sbjct: 105 ARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVL---- 160
Query: 67 NVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+ + V DG ++ DV S+I Y + A +F MP++D+ S
Sbjct: 161 --KACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS 218
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV-------NGLVREGRIVEARKLFD 169
WN +I CQ + E+ G R + S T++ G G + + +
Sbjct: 219 WNAMISGY--CQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKH 276
Query: 170 KMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISY 229
+ + ++ N +I Y + G + + +F +M+ RDL SW +I + + AIS
Sbjct: 277 GLES-ELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISL 335
Query: 230 FKQM------PETCEKTWNSIISVLIRNGLVKEAHSY----LEK-YPYSNIASWTNVIVG 278
F++M P+ T S+ S+L + G ++ S L K + +I V+V
Sbjct: 336 FQEMRLSRIQPDCL--TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP-SPDNAT 337
Y ++G V SA VF + DV WN +I G +N E ++ + M+E G + + T
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
+ SVL CS L G ++H + +K V ++ MY +CG ++ AL F +P
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ + WN++I +HG+ EKA+ LF+ M KPD ITFV +LSACS++GLVD+G++
Sbjct: 514 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
F+ M+ Y + P HY C+VD+ GR G ++ A+ I++ ++ ++WGALL AC
Sbjct: 574 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF---IKSMSLQPDASIWGALLSAC 630
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
R+H N+ +G+IA E + E+EP + G +++L+ MY S G+ E I + G++K PG
Sbjct: 631 RVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPG 690
Query: 578 CSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
S +++++ VF +G+ +HP + + L L +++
Sbjct: 691 WSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 208/472 (44%), Gaps = 36/472 (7%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R + A+ LFD+MP RD +WN MI GY ++G A+ L N + D T ++++
Sbjct: 197 RYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSA 256
Query: 62 LMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
++ + + G+E V+ N +I Y G + + +VF M ++D++S
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVS-NKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGL---------VREGRIVEARKL 167
WN +I A ++ A S F+EM + + + L +R R V+ L
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
+D+ N ++ Y G V A +F + + D+ SW +I+G + AI
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI 435
Query: 228 SYFKQMPETCE-----KTWNSIISVLIRNGLVKEA---HSYLEKYP-YSNIASWTNVIVG 278
+ M E E TW S++ + G +++ H L K Y ++ T++
Sbjct: 436 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADM 495
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G + A+ +F + + WN +I G + GE+ + F +M + G PD+ TF
Sbjct: 496 YGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITF 555
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLEF 393
++L+ CS +D G+ ++ + + + M+ MY R G +++AL
Sbjct: 556 VTLLSACSHSGLVDEGQ----WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFI 611
Query: 394 SSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
S+ + D W +++ HG + L L + +P+ + + +LS
Sbjct: 612 KSMSLQPDASIWGALLSACRVHGNVD--LGKIASEHLFEVEPEHVGYHVLLS 661
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 199/471 (42%), Gaps = 70/471 (14%)
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN-----GCVGVAEDLFQKMHDRD 206
V+ L R +++ K Q N+ I+ L N G V +A F + +RD
Sbjct: 57 VHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 207 LTSWKQLINGL---VNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV---KEAHSY 260
+ +W +I+G NS + S F + + + SVL V + H
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLF-MLSSGLTPDYRTFPSVLKACRTVIDGNKIHCL 175
Query: 261 LEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
K+ + ++ ++I Y VG+A +F+ M RD+ WN MI G ++ +E
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
L ++ + D+ T S+L+ C++ + G IH+ +IK VSN +I +
Sbjct: 236 LTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
YA G ++ F + + D+ISWNSII + +A+ LF+ MRL+ +PD +T
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 440 VGVLS---------ACS-------------------------YA--GLVDQGRYYFDCMK 463
+ + S AC YA GLVD R F+ +
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 464 NKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG-IEVSPTVWGALLGACRIHNN 522
N + + ++ + G EA+ + N + +G I + W ++L AC
Sbjct: 412 NTDVIS-----WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466
Query: 523 IKVGEIAGERVMELEPNNSGVYL------ILTEMYLSCGRREDAKRIFAQM 567
++ G R+++ +G+YL L +MY CGR EDA +F Q+
Sbjct: 467 LRQGMKLHGRLLK-----NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 193/661 (29%), Positives = 316/661 (47%), Gaps = 76/661 (11%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGY------------FKNGFLDNAMCLFNQMP--- 48
R+ EA + D NVMIRG+ ++ D A P
Sbjct: 55 GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114
Query: 49 ------------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
E D++T N+++A + V+ A+ VFDGM VRD+V
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIV 174
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNC-------QRMDLAES 135
TWN M+ GYV NGL AL F M V + V I AL C Q ++
Sbjct: 175 TWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGY 234
Query: 136 YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
+ +D+ T +++ + G + AR +F MP + V WN MI GY N A
Sbjct: 235 VIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEA 294
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
D F +M L + AI+ C +T +S+ +
Sbjct: 295 FDCFMQMRAEGLQV------------EVVTAINLLA----ACAQTESSLYG--------R 330
Query: 256 EAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
H Y+ + + ++ T ++ Y ++G+V S+ K+F + + + WN MI +
Sbjct: 331 SVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKE 390
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
+ E + F+++ PD T ++V+ L +L RQIH+ I + + T + N
Sbjct: 391 MYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMN 450
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
A++ MYAR G++ ++ F + D+ISWN++I G A HG + ALE+F+ M+ +P
Sbjct: 451 AVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQP 510
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
++ TFV VL+ACS +GLVD+G +F+ M +Y + P+ HY C+ DLLGR G + E +
Sbjct: 511 NESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQF 570
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
+ + I+ + VWG+LL A R N+I + E A ER+ +LE +N+G Y++L+ MY
Sbjct: 571 IESM---PIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADA 627
Query: 555 GRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
GR ED +R+ MKE G+++ S ++++ F +GD SH + + + ++L +I
Sbjct: 628 GRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSDILSRKI 687
Query: 615 E 615
+
Sbjct: 688 K 688
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 138/333 (41%), Gaps = 38/333 (11%)
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
S +++V G + A++ + D + NVMI G + L L + M E
Sbjct: 42 GSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLED 101
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G PD TF V+ C+ L LD GR H IK+ N+++ YA+ G ++ A
Sbjct: 102 GARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDA 161
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR-LTDFKPDDITFVGVLSACSY 448
F +P+ DI++WN ++ G +G AL F+ M + + D + + L+AC
Sbjct: 162 ERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCL 221
Query: 449 AGLVDQGR-----------------------YYFDCMKNKYFLQPRSAHYTCVVD----- 480
QG+ Y C + Y RS T +
Sbjct: 222 EFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAY---ARSVFATMPLRTVVTW 278
Query: 481 --LLGRFGL---IDEAMNLLNEIRADGIEVSPTVWGALLGAC-RIHNNIKVGEIAGERVM 534
++G + L DEA + ++RA+G++V LL AC + +++ + G V
Sbjct: 279 NCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVR 338
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+ + L EMY G+ E +++IF ++
Sbjct: 339 RQFLPHVVLETALLEMYGKVGKVESSEKIFGKI 371
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 82/209 (39%), Gaps = 60/209 (28%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R+ + ++ +FDKM +D ++WN MI GY +G A+ +F++M YN G
Sbjct: 458 RSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEM------KYN----G 507
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
L +++ T+ S+++ +GL+DE F+ M
Sbjct: 508 LQPNES-----------------TFVSVLTACSVSGLVDEGWMHFNLM------------ 538
Query: 122 GALVNCQRMDLAESYFKEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV-QAW 179
+E G + + M + L REG + E + + MP + W
Sbjct: 539 ---------------LQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVW 583
Query: 180 NLMIAGYLDNGCVGV----AEDLFQKMHD 204
++ + + + AE +FQ HD
Sbjct: 584 GSLLTASRNQNDIDIAEYAAERIFQLEHD 612
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 186/599 (31%), Positives = 303/599 (50%), Gaps = 41/599 (6%)
Query: 35 GFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYV 94
G + A LF ++PE D+ +N +I G + D ++ M +++ VT +S ++
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNM-LKEGVTPDSHTFPFL 140
Query: 95 CNGLIDEALRVFHGMPLK-DVVSWNL-----VIGALVN----CQRMDLAESYFKEMGARD 144
NGL + + G L VV + L V ALV C MD+A F D
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 145 VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHD 204
V SW +M++G R E+ +L +M V ++ + L + C K+ D
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVL-SAC--------SKVKD 251
Query: 205 RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
+DL +R+ +S K P + N++++ G + A
Sbjct: 252 KDLC------------KRVHEYVSECKTEPSL--RLENALVNAYAACGEMDIAVRIFRSM 297
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
++ SWT+++ GY E G + A F+ M RD W +MI G E L+ F
Sbjct: 298 KARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFR 357
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
+M+ +G PD T SVLT C+ L +L++G I K V NA+I MY +CG
Sbjct: 358 EMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCG 417
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+ A F + D +W +++ GLA +G ++A+++F +M+ +PDDIT++GVLS
Sbjct: 418 CSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLS 477
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
AC+++G+VDQ R +F M++ + ++P HY C+VD+LGR GL+ EA +L R +
Sbjct: 478 ACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEIL---RKMPMN 534
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ VWGALLGA R+HN+ + E+A ++++ELEP+N VY +L +Y C R +D + +
Sbjct: 535 PNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVR 594
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIEREILFDAY 623
++ + +KK PG S I++N H F++GD SH + + L E+ +E F AY
Sbjct: 595 RKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLE----ELAQESTFAAY 649
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 216/506 (42%), Gaps = 63/506 (12%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTY-- 55
+ A LF K+P+ D V WN MI+G+ K + L+ M P+ F +
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 56 ------------------NTVIAGLMQSDNVQG--------------AKEVFDGMEVRDV 83
+ V GL + VQ A+ VFD DV
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAE---SY 136
+WN MISGY +E++ + M V V+ LV+ A + DL + Y
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 137 FKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
E + +VN G + A ++F M A+DV +W ++ GY++ G + +A
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA 321
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRN 251
F +M RD SW +I+G + + + ++ F++M E T S+++
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL 381
Query: 252 GLVKEAH---SYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
G ++ +Y++K N N ++ YF+ G A KVF M RD W M+
Sbjct: 382 GSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMV 441
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
GL N G+E +K F QM++ PD+ T+ VL+ C+ +D R+ A+ R
Sbjct: 442 VGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRI 501
Query: 368 QFTTVS-NAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFE 425
+ + V M+ M R G ++ A +P++ + I W +++ H E EL
Sbjct: 502 EPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN-DEPMAELAA 560
Query: 426 RMRLTDFKPDDITFVGVLSACS-YAG 450
+ ++ + +PD+ +L C+ YAG
Sbjct: 561 K-KILELEPDNGAVYALL--CNIYAG 583
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 153/427 (35%), Positives = 243/427 (56%), Gaps = 10/427 (2%)
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
N ++ Y +G + E +F + DL SW LI AI+ F +M T ++
Sbjct: 177 NTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCTADR 236
Query: 240 -TWNSIISVLIRNG---LVKEAHSYLEKYPY---SNIASWTNVIVGYFEMGEVGSAIKVF 292
T ++S + G L K+ +Y++ + + S++ ++ Y + G+ A ++F
Sbjct: 237 MTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLF 296
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
LM +++ WN MI GL L +E L F +M+ G PD+ T VL C++L L+
Sbjct: 297 HLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLE 356
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
LG+ +H+ K V+NA++ MYA+CG+I A + F ++ D+ S+ ++I G A
Sbjct: 357 LGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFA 416
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
HG A++AL +F M +PD +T VGVLSACS+AGL+++GR +F M Y LQP++
Sbjct: 417 MHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQT 476
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGER 532
HY C+VDLLGR GLI EA N++ I +VWG+LLGAC+IH +++GE ++
Sbjct: 477 EHYGCMVDLLGRAGLISEAEAFTNKM---PIVPDASVWGSLLGACKIHAKVELGETVIQK 533
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLS 592
++E+EP G Y++++ +Y S R DA + MK+N +KK PGCS I+++ H F
Sbjct: 534 LIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVDGMVHEFRK 593
Query: 593 GDSSHPK 599
G+ SHPK
Sbjct: 594 GEKSHPK 600
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 161/395 (40%), Gaps = 36/395 (9%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
++F NT++ S ++ ++VFD D+++W ++I Y G EA+ F M
Sbjct: 172 NLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMN 231
Query: 111 LK-DVVSWNLVIGALVNCQRMDLAESYFKEMGAR--DVASWTIMVNGL----VREGRIVE 163
D ++ +V+ A L + M DV S + N L ++ G+
Sbjct: 232 CTADRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHL 291
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
AR+LF MP K++ +WN MI+G G A +F++M L + G++NS
Sbjct: 292 ARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNS--- 348
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEM 282
C L L K HSY++K N +V Y +
Sbjct: 349 -------------CAN--------LGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKC 387
Query: 283 GEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVL 342
G + A VF+ M +DV + MI G + + L F +M G PD+ T VL
Sbjct: 388 GSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVL 447
Query: 343 TICSDLPTLDLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPI-HD 400
+ CS L+ GR+ ++ Q T M+ + R G I A + +PI D
Sbjct: 448 SACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPD 507
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPD 435
W S++ H E + + +L + +P+
Sbjct: 508 ASVWGSLLGACKIHAKVELGETVIQ--KLIEMEPE 540
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 121/303 (39%), Gaps = 37/303 (12%)
Query: 300 VTVWNVMIFGLG-ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
V ++N +I L N+ + QM G SPD T +L CS QIH
Sbjct: 102 VYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIH 161
Query: 359 AQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
A +IK + V N ++ YA G I++ F P D+ISW ++I + GY
Sbjct: 162 AHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPS 221
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF----------- 467
+A+ F RM T D +T V VLSACS G G+ M + F
Sbjct: 222 EAIAAFFRMNCT---ADRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNA 278
Query: 468 --------LQPRSA----HYTCVVDL---------LGRFGLIDEAMNLLNEIRADGIEVS 506
QP A H V +L L GL EA+++ ++ G++
Sbjct: 279 LLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPD 338
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSG-VYLILTEMYLSCGRREDAKRIFA 565
+L +C ++++G+ + + G V L +MY CG + A +F
Sbjct: 339 SVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQ 398
Query: 566 QMK 568
MK
Sbjct: 399 AMK 401
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 152/356 (42%), Gaps = 64/356 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----------------- 48
I+ + +FD+ P D ++W +I+ Y K G+ A+ F +M
Sbjct: 189 IEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCTADRMTLVVVLSACSQ 248
Query: 49 ---------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWN 87
D+F N ++ ++ A+++F M V+++V+WN
Sbjct: 249 LGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWN 308
Query: 88 SMISGYVCNGLIDEALRVF---HGMPLK-DVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
SMISG GL EAL +F M LK D V+ V+ + N ++L + +
Sbjct: 309 SMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKN 368
Query: 144 DVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
+ + + N LV + G I +A +F M KDV ++ MI G+ +G A +F
Sbjct: 369 HMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIF 428
Query: 200 QKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQM-------PETCEKTWNSIISVL 248
+M D + +++ ++ ++ +F+ M P+T + + ++ +L
Sbjct: 429 SEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQT--EHYGCMVDLL 486
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMG---EVGSAI--KVFELMTTRD 299
R GL+ EA ++ K P AS ++G ++ E+G + K+ E+ RD
Sbjct: 487 GRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEMEPERD 542
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 176/554 (31%), Positives = 282/554 (50%), Gaps = 35/554 (6%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD--------VVSWNLVIG 122
A+ VFD M VRD V WN++++GY NGL A+ + M ++ +VS
Sbjct: 113 ARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACA 172
Query: 123 ALVNCQRMDLAESYFKEMGARDVAS-WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
A ++ G ++ + T +++ + G I AR +FD MP K+ +WN
Sbjct: 173 NARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNA 232
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW 241
MI GY NG A LF +M + + V + AA+ ++ C
Sbjct: 233 MIDGYAQNGDSREALALFNRMVEEGVD---------VTDVSVLAALQACGEL--GCLDEG 281
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
+ +L+R GL SN++ +I Y + V A VF+ + R
Sbjct: 282 MRVHELLVRIGL------------DSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQV 329
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
WN MI G +N E+ ++ F +M+ PD+ T SV+ +D+ R IH +
Sbjct: 330 SWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYS 389
Query: 362 IKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKAL 421
I++ +Q V A+I MYA+CG + A + F+S +I+WN++I G HG+ + A+
Sbjct: 390 IRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAV 449
Query: 422 ELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDL 481
ELFE M+ P++ TF+ VLSACS+AGLVD+GR YF MK Y L+P HY +VDL
Sbjct: 450 ELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDL 509
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNS 541
LGR G +DEA + ++ D +V+GA+LGAC++H N+++ E + +++ EL P
Sbjct: 510 LGRAGKLDEAWAFIQKMPMDP---GLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEG 566
Query: 542 GVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFH 601
+++L +Y + +D R+ M++NG++K PG S IQ+ + H F SG ++H +
Sbjct: 567 VYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAK 626
Query: 602 RLRYLLNLLHTEIE 615
+ L L EI+
Sbjct: 627 EIYSRLAKLIEEIK 640
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 173/400 (43%), Gaps = 71/400 (17%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVI 59
R +A+ +FD+MP RD V WN ++ GY +NG AM + +M E D T +V+
Sbjct: 109 RPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVL 168
Query: 60 ---------------------AGLMQSDNV--------------QGAKEVFDGMEVRDVV 84
+GL + NV + A+ VFD M ++ V
Sbjct: 169 PACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSV 228
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMDLAESYFK--EMG 141
+WN+MI GY NG EAL +F+ M + V V+ V+ AL C + + + E+
Sbjct: 229 SWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELL 288
Query: 142 AR-----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
R +V+ ++ + R+ A +FD++ + +WN MI G NGC A
Sbjct: 289 VRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAV 348
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
LF +M QL N +S + + I + + + W S+ +
Sbjct: 349 RLFTRM---------QLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRL------- 392
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
+L++ Y T +I Y + G V A +F R V WN MI G G + G
Sbjct: 393 ---HLDQDVY----VLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFG 445
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+ ++ F +MK G P+ TF SVL+ CS +D GR+
Sbjct: 446 KAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE 485
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 157/352 (44%), Gaps = 65/352 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------------- 50
I+ A+ +FD MP +++V+WN MI GY +NG A+ LFN+M E
Sbjct: 212 IRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQA 271
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
++ N +I + V A VFD ++ R V+W
Sbjct: 272 CGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSW 331
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVV--SWNL--VIGALVNCQRMDLAESYFKEMGA 142
N+MI G NG ++A+R+F M L++V S+ L VI AL + L +
Sbjct: 332 NAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISD-PLQARWIHGYSI 390
Query: 143 R-----DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
R DV T +++ + GR+ AR LF+ + V WN MI GY +G A +
Sbjct: 391 RLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVE 450
Query: 198 LFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVL 248
LF++M + T++ +++ ++ +D YF M E + + +++ +L
Sbjct: 451 LFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLL 510
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVGY------FEMGEVGSAIKVFEL 294
R G + EA ++++K P S ++G E+ E SA K+FEL
Sbjct: 511 GRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAE-ESAQKIFEL 561
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 122/294 (41%), Gaps = 58/294 (19%)
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L FV M +G P TFTS+L +C+ L GR +HAQ + + A+
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF-KPDDI 437
MYA+C A F +P+ D ++WN+++ G A +G A A+E+ RM+ + +PD I
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 438 TFVGVL-------------SACSYA----------------------GLVDQGRYYFDCM 462
T V VL A ++A G + R FD M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 463 KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNN 522
K S + ++D + G EA+ L N + +G++V+ A L AC
Sbjct: 223 PTK-----NSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQAC----- 272
Query: 523 IKVGEIA----GERVMEL-----EPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
GE+ G RV EL +N V L MY C R + A +F ++
Sbjct: 273 ---GELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDEL 323
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 283/568 (49%), Gaps = 40/568 (7%)
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
A L+ D + A +F+ ++ + +N MI G D AL +F M K V
Sbjct: 63 AALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKF 122
Query: 120 VIGALVN-CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
+++ C RM +REG V A L + +
Sbjct: 123 TFSSVLKACSRMKA-----------------------LREGEQVHALILKSGFKSNEF-V 158
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE-TC 237
N +I Y + G +GVA +F M +R + +W +++G + D + F+++ E
Sbjct: 159 ENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRI 218
Query: 238 EKTWNSIISVLIRNGLVK--EAHSYLEKYPYS-----NIASWTNVIVGYFEMGEVGSAIK 290
E ++ISVL+ G + E + +Y S N T++I Y + G+V +A K
Sbjct: 219 EFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARK 278
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+F+ M RDV W+ MI G + D +E L F +M++ P+ T SVL C+ L
Sbjct: 279 LFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGA 338
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICG 410
+ G+ +H K T+ +I YA+CG I ++ F + ++ +W ++I G
Sbjct: 339 YETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQG 398
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP 470
LA +G + ALE F M D KP+D+TF+GVLSACS+A LVDQGR+ F+ M+ + ++P
Sbjct: 399 LANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEP 458
Query: 471 RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP--TVWGALLGACRIHNNIKVGEI 528
R HY C+VD+LGR G ++EA + D + P VW LL +CR H NI++ E
Sbjct: 459 RIEHYGCMVDILGRAGFLEEAYQFI-----DNMPFPPNAVVWRTLLASCRAHKNIEMAEK 513
Query: 529 AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGH 588
+ E + LEP +SG Y++L+ Y GR EDA R+ + +KE +KK PGCS I+++ H
Sbjct: 514 SLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVH 573
Query: 589 VFLSGDSSHPKFHRLRYLLNLLHTEIER 616
F S D H + L+ + +I+R
Sbjct: 574 EFFSEDGEHKHSKEIHDALDKMMKQIKR 601
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/485 (26%), Positives = 209/485 (43%), Gaps = 97/485 (20%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVI-- 59
I A ++F+ + + ++ +NVMIRG DNA+ LF +M E+ D FT+++V+
Sbjct: 71 IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130
Query: 60 ----AGLMQSDNVQG-----------------------------AKEVFDGMEVRDVVTW 86
L + + V A+ VFDGM R +V W
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190
Query: 87 NSMISGYVCNGLIDEALRVFHG-----MPLKDV--VSWNLVIGALVNCQRMDLAESYFKE 139
NSM+SGY NGL DE +++F + DV +S + G L N + +L Y
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250
Query: 140 MGARDVASWTI-MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
G R + T +++ + G++ ARKLFD+M +DV AW+ MI+GY A +L
Sbjct: 251 KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNL 310
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV---- 254
F +M G V + +++SVL ++
Sbjct: 311 FHEMQ-----------KGNVYPNEV-------------------TMVSVLYSCAMLGAYE 340
Query: 255 --KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
K H Y++K + T +I Y + G + +++VF+ M+ ++V W +I GL
Sbjct: 341 TGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLA 400
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
N G+ L+FF M E+ P++ TF VL+ CS +D GR + R F
Sbjct: 401 NNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHL----FNSMRRDFDI 456
Query: 372 VSN-----AMITMYARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYHG---YAEKALE 422
M+ + R G ++ A ++P + + W +++ H AEK+LE
Sbjct: 457 EPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLE 516
Query: 423 LFERM 427
R+
Sbjct: 517 HITRL 521
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 153/349 (43%), Gaps = 57/349 (16%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-RDMFTYNTVIAGLM 63
+I A+++FD MP+R V WN M+ GY KNG D + LF ++ E R F T+I+ LM
Sbjct: 171 QIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLM 230
Query: 64 --------------------------------------QSDNVQGAKEVFDGMEVRDVVT 85
+ V A+++FD M+ RDVV
Sbjct: 231 ACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVA 290
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQRMDLAES------YFK 138
W++MISGY EAL +FH M +V + ++ L +C + E+ Y K
Sbjct: 291 WSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIK 350
Query: 139 EMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+ + V T +++ + G I + ++F +M K+V W +I G +NG +A +
Sbjct: 351 KKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALE 410
Query: 198 LFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMPETCE-----KTWNSIISVL 248
F M + D+ ++ +++ ++ +D F M + + + ++ +L
Sbjct: 411 FFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDIL 470
Query: 249 IRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
R G ++EA+ +++ P+ N W ++ + A K E +T
Sbjct: 471 GRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHIT 519
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 186/663 (28%), Positives = 322/663 (48%), Gaps = 79/663 (11%)
Query: 8 EAQNLFDKMP---QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIA 60
+A+++F+ M +RD V+W+ M+ Y NG +A+ +F + E + + Y VI
Sbjct: 115 KAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIR 174
Query: 61 GLMQSDNV-------------------------------------QGAKEVFDGMEVRDV 83
SD V + A +VFD M +V
Sbjct: 175 ACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAE---SY 136
VTW MI+ + G EA+R F M L D + + V A + + L + S+
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSW 294
Query: 137 FKEMGARDVASWTI--MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
G D ++ M +G + + RK+FD+M V +W +I GY+ N +
Sbjct: 295 AIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 195 -AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A +LF +M + G V + ++ + + ++ + GL
Sbjct: 355 EAINLFSEM----------ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL 404
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
SN + +VI + + + A + FE ++ +++ +N + G N
Sbjct: 405 A------------SNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
E+ K ++ E TF S+L+ +++ ++ G QIH+Q +K+ + V
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
NA+I+MY++CG+I +A F+ + ++ISW S+I G A HG+A + LE F +M K
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
P+++T+V +LSACS+ GLV +G +F+ M + ++P+ HY C+VDLL R GL+ +A
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
+N + + VW LGACR+H+N ++G++A +++EL+PN Y+ L+ +Y
Sbjct: 633 FINTM---PFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYAC 689
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
G+ E++ + +MKE + KE GCSWI++ D H F GD++HP H++ L+ L TE
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITE 749
Query: 614 IER 616
I+R
Sbjct: 750 IKR 752
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 135/580 (23%), Positives = 244/580 (42%), Gaps = 53/580 (9%)
Query: 14 DKMPQRDTVTWNVMIRGY-----FKNGFLDNAMCL-FNQMPERDMFTYNTVIAGLMQSDN 67
D + D+VT++ +++ F+ G L +A + F+ P D YN++I+ +S +
Sbjct: 55 DGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEP--DSVLYNSLISLYSKSGD 112
Query: 68 VQGAKEVFDGME---VRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNL 119
A++VF+ M RDVV+W++M++ Y NG +A++VF G+ D +
Sbjct: 113 SAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYC-YTA 171
Query: 120 VIGALVNCQRMDLAE---SYFKEMG--ARDVASWTIMVNGLVR-EGRIVEARKLFDKMPA 173
VI A N + + + + G DV +++ V+ E A K+FDKM
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
+V W LMI + G A F M S K ++ + ++ +S KQ+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 234 PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE 293
+W IR+GLV + S ++ G V KVF+
Sbjct: 292 -----HSW------AIRSGLVDDVE-----------CSLVDMYAKCSADGSVDDCRKVFD 329
Query: 294 LMTTRDVTVWNVMIFGLGEN-DLGEEGLKFFVQMKESGP-SPDNATFTSVLTICSDLPTL 351
M V W +I G +N +L E + F +M G P++ TF+S C +L
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
+G+Q+ QA K ++V+N++I+M+ + ++ A F S+ +++S+N+ + G
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
+ E+A +L + + TF +LS + G + +G + K L
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV-KLGLSCN 508
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN-NIKVGEIAG 530
++ + + G ID A + N + + W +++ H I+V E
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFMENRNV----ISWTSMITGFAKHGFAIRVLETFN 564
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
+ + E N Y+ + G + R F M E+
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYED 604
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 197/450 (43%), Gaps = 47/450 (10%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGL 62
+ A +FDKM + + VTW +MI + GF A+ F M E D FT ++V +
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 63 MQSDNVQGAKEVF-----DGMEVRDV-VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+ +N+ K++ G+ V DV + M + +G +D+ +VF M V+S
Sbjct: 280 AELENLSLGKQLHSWAIRSGL-VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS 338
Query: 117 WN-LVIGALVNCQRMDLAESYFKEM---GARDVASWTIMVNGLVREGRIVEAR------- 165
W L+ G + NC A + F EM G + +T + G + + R
Sbjct: 339 WTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS-SAFKACGNLSDPRVGKQVLG 397
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
+ F + A + N +I+ ++ + + A+ F+ + +++L S+ ++G + +
Sbjct: 398 QAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 226 AISYFKQMPETCEK-------TWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNV 275
A FK + E E+ T+ S++S + G +++ HS + K S N
Sbjct: 458 A---FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514
Query: 276 IVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ Y + G + +A +VF M R+V W MI G ++ L+ F QM E G P+
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 335 NATFTSVLTICSDLPTLDLG-RQIHA----QAIKIARNQFTTVSNAMITMYARCGNIQSA 389
T+ ++L+ CS + + G R ++ IK + M+ + R G + A
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA----CMVDLLCRAGLLTDA 630
Query: 390 LLEFSSVPIH-DIISWNSIICGLAYHGYAE 418
+++P D++ W + + H E
Sbjct: 631 FEFINTMPFQADVLVWRTFLGACRVHSNTE 660
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 129/279 (46%), Gaps = 26/279 (9%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFL-DNAMCLFNQM-----PERDMFTYN 56
+ + + + +FD+M ++W +I GY KN L A+ LF++M E + FT++
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVT----WNSMISGYVCNGLIDEALRVFHGMPLK 112
+ + + K+V R + + NS+IS +V + +++A R F + K
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437
Query: 113 DVVSWNLVIGALVNCQRMDLAESY--FKEMGARD--VASWTI--MVNGLVREGRIVEARK 166
++VS+N + C+ ++ +++ E+ R+ V+++T +++G+ G I + +
Sbjct: 438 NLVSYNTFLDG--TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 495
Query: 167 LFDKMPAKDVQA----WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ ++ + N +I+ Y G + A +F M +R++ SW +I G
Sbjct: 496 IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGF 555
Query: 223 IDAAISYFKQMPETC----EKTWNSIISVLIRNGLVKEA 257
+ F QM E E T+ +I+S GLV E
Sbjct: 556 AIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG 594
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 103/235 (43%), Gaps = 51/235 (21%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYN 56
+++ R+++AQ F+ + +++ V++N + G +N + A L +++ ER++ FT+
Sbjct: 419 VKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFA 478
Query: 57 TVIAGLM-----------------------------------QSDNVQGAKEVFDGMEVR 81
++++G+ + ++ A VF+ ME R
Sbjct: 479 SLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR 538
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNCQRMDLAESYFKE 139
+V++W SMI+G+ +G L F+ M +++ V N V + L C + L ++
Sbjct: 539 NVISWTSMITGFAKHGFAIRVLETFNQM-IEEGVKPNEVTYVAILSACSHVGLVSEGWRH 597
Query: 140 MGAR--------DVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAG 185
+ + + MV+ L R G + +A + + MP + DV W +
Sbjct: 598 FNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 120/292 (41%), Gaps = 52/292 (17%)
Query: 326 MKESGPSP-DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
M G P D+ TF+S+L C LG+ +HA+ I+ + + N++I++Y++ G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 385 NIQSALLEFSSVP---IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+ A F ++ D++SW++++ +G A+++F P+D +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 442 VLSACSYAGLVDQGRYYF---------------------------DCMKNKYFLQPRSAH 474
V+ ACS + V GR + +N Y + + +
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 475 -----YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE-- 527
+T ++ + G EA+ ++ G E ++ AC N+ +G+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 528 ----IAGERVMELEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKENGV 572
I V ++E + L +MY C G +D +++F +M+++ V
Sbjct: 292 HSWAIRSGLVDDVECS-------LVDMYAKCSADGSVDDCRKVFDRMEDHSV 336
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 158/528 (29%), Positives = 265/528 (50%), Gaps = 46/528 (8%)
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A++ F +M RD SW +++ + G I + FD+MP +D ++N IAG+ N C
Sbjct: 77 AQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCP 136
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK--------TWNSI 244
+ +LF++M + I ++N+ + Y KQ+ + WN++
Sbjct: 137 QESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNAL 196
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASW-------------------------------- 272
+ + G +++A + N+ SW
Sbjct: 197 TDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQ 256
Query: 273 ---TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
+ +I Y + G V A +VF +D+ W M+ G +N E+ L F +M
Sbjct: 257 VTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLE 316
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
PD+ T +SV++ C+ L +L G+ +H ++I N VS+A+I MY++CG I A
Sbjct: 317 HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDA 376
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F+ +P +++SWN++I G A +G+ + ALELFE M FKPD++TF+G+LSAC +
Sbjct: 377 RSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHC 436
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
++QG+ YFD + N++ + P HY C+V+LLGR G I++A+ L+ + D +
Sbjct: 437 NWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDP---DFLI 493
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
W LL C +I E+A + EL+P + Y++L+ MY S GR +D + MK
Sbjct: 494 WSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKS 553
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
VKK G SWI+I++ H F S D +HP+ + LN+L +++ E
Sbjct: 554 KNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEE 601
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 194/458 (42%), Gaps = 79/458 (17%)
Query: 1 MRNARIQEAQNLFDKMPQR-----DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTY 55
+R I +A+ L M D+ N ++ Y K G L +A LF++M +RD F++
Sbjct: 33 VRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSW 92
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
N +++ +S ++Q K FD M RD V++N+ I+G+ N E+L +F M +
Sbjct: 93 NALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFE 152
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGAR--------DVASWTIMVNGLVREGRIVEARKL 167
I +++N L Y K++ +V W + + + G I +AR L
Sbjct: 153 PTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWL 212
Query: 168 FDKMPAKDVQAWNLMIAGYLDNG----CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
FD + K++ +WNLMI+GY NG C+G+ + H D + +I R+
Sbjct: 213 FDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRV 272
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA----------HSYLEKYPYSNIASW- 272
D A F + E W +++ +NG ++A H + Y S++ S
Sbjct: 273 DEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332
Query: 273 ----------------------TNVIVG------YFEMGEVGSAIKVFELMTTRDVTVWN 304
N++V Y + G + A VF LM TR+V WN
Sbjct: 333 AKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWN 392
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
MI G +N ++ L+ F M + PDN TF +L+ C +H I+
Sbjct: 393 AMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSAC-----------LHCNWIEQ 441
Query: 365 ARNQFTTVSN------------AMITMYARCGNIQSAL 390
+ F ++SN M+ + R G I+ A+
Sbjct: 442 GQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAV 479
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 49/254 (19%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI 59
R+ EA+ +F + ++D V W M+ GY KNG ++A+ LFN+M E D +T ++V+
Sbjct: 270 GRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVV 329
Query: 60 ------AGLMQSDNVQG-----------------------------AKEVFDGMEVRDVV 84
A L V G A+ VF+ M R+VV
Sbjct: 330 SSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVV 389
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYFKEM 140
+WN+MI G NG +AL +F M + D V++ ++ A ++C ++ + YF +
Sbjct: 390 SWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSI 449
Query: 141 GARDVASWTI-----MVNGLVREGRIVEARKLFDKMPA-KDVQAWNLMIAGYLDNGCVGV 194
+ + T+ MVN L R GRI +A L M D W+ +++ G +
Sbjct: 450 SNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVN 509
Query: 195 AEDLFQKMHDRDLT 208
AE + + + D T
Sbjct: 510 AEVAARHLFELDPT 523
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 265/504 (52%), Gaps = 10/504 (1%)
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
N I A + R+DLA S+ +M +V + ++ G V + + + + +M V
Sbjct: 816 NQFITACSSFNRLDLAVSFMTQMQKPNVFVYNALIKGFVTCSHPIRSLEFYVRMLRDSVS 875
Query: 178 AWNLMIAGYLDNGCV--GVAEDLFQKMHDRDLTSWKQLINGLVN----SRRIDAAISYFK 231
+ + + G E L + Q+ L+ S RI A F
Sbjct: 876 PSSYTYSSLVQASAFASGFGESLQAHIWKFGFGFHVQIQTTLIGFYSASGRIREARKVFD 935
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
+MPE + TW +++S + + A+S + P N A+W +I GY +G + A +
Sbjct: 936 EMPERDDVTWTTMVSAYRQVLDMDSANSLANQMPEKNEATWNCLIDGYTRLGNLELAESL 995
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F M +D+ W MI G N E + F +M E G PD T ++V++ C+ L L
Sbjct: 996 FNQMPVKDIISWTTMINGYSRNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVL 1055
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
++G+++H ++ + +A++ MY++CG+++ ALL F ++P ++ WNSII GL
Sbjct: 1056 EIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGL 1115
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
A HG+A++AL++F +M + KP+ +TFV V +AC++AGLV++GR + M + Y +
Sbjct: 1116 AAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIYRSMIDDYSIVSN 1175
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
HY C+V L + GLI EA+ L+ + E + +WGALL CRIH N+++ EIA
Sbjct: 1176 VEHYGCMVHLFSKAGLIYEALELIGSME---FEPNAVIWGALLDGCRIHKNLEIAEIAFN 1232
Query: 532 RVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE-PGCSWIQINDGGHVF 590
++M LEP NSG Y +L MY R D I +M+E G++K PG S I+I+ H+F
Sbjct: 1233 KLMILEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLF 1292
Query: 591 LSGDSSHPKFHRLRYLLNLLHTEI 614
+ D SH + LL+ ++ ++
Sbjct: 1293 AAADKSHSASDEVCLLLDEIYEQM 1316
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 193/443 (43%), Gaps = 80/443 (18%)
Query: 37 LDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV-----TWNSMIS 91
LD A+ QM + ++F YN +I G + + + E + M +RD V T++S++
Sbjct: 828 LDLAVSFMTQMQKPNVFVYNALIKGFVTCSHPIRSLEFYVRM-LRDSVSPSSYTYSSLVQ 886
Query: 92 G---------------------------------YVCNGLIDEALRVFHGMPLKDVVSWN 118
Y +G I EA +VF MP +D V+W
Sbjct: 887 ASAFASGFGESLQAHIWKFGFGFHVQIQTTLIGFYSASGRIREARKVFDEMPERDDVTWT 946
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
++ A MD A S +M ++ A+W +++G R G + A LF++MP KD+ +
Sbjct: 947 TMVSAYRQVLDMDSANSLANQMPEKNEATWNCLIDGYTRLGNLELAESLFNQMPVKDIIS 1006
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
W MI GY N A +F KM + + +P+ E
Sbjct: 1007 WTTMINGYSRNKRYREAIAVFYKMMEEGI-------------------------IPD--E 1039
Query: 239 KTWNSIISVLIRNGLV---KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFEL 294
T +++IS G++ KE H Y + + ++ + ++ Y + G + A+ VF
Sbjct: 1040 VTMSTVISACAHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERALLVFFN 1099
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+ +++ WN +I GL + +E LK F +M+ P+ TF SV T C+ ++ G
Sbjct: 1100 LPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEG 1159
Query: 355 RQIHAQAIKIARNQFTTVSN-----AMITMYARCGNIQSALLEFSSVPIH-DIISWNSII 408
R+I+ I + ++ VSN M+ ++++ G I AL S+ + + W +++
Sbjct: 1160 RRIYRSMI----DDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALL 1215
Query: 409 CGLAYHGYAEKALELFERMRLTD 431
G H E A F ++ + +
Sbjct: 1216 DGCRIHKNLEIAEIAFNKLMILE 1238
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 117/208 (56%), Gaps = 8/208 (3%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
+ RI+EA+ +FD+MP+RD VTW M+ Y + +D+A L NQMPE++ T+N +I G
Sbjct: 924 SGRIREARKVFDEMPERDDVTWTTMVSAYRQVLDMDSANSLANQMPEKNEATWNCLIDGY 983
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWN 118
+ N++ A+ +F+ M V+D+++W +MI+GY N EA+ VF+ M + D V+ +
Sbjct: 984 TRLGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREAIAVFYKMMEEGIIPDEVTMS 1043
Query: 119 LVIGALVNCQRMDLAES---YFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
VI A + +++ + Y + G DV + +V+ + G + A +F +P K
Sbjct: 1044 TVISACAHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK 1103
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
++ WN +I G +G A +F KM
Sbjct: 1104 NLFCWNSIIEGLAAHGFAQEALKMFAKM 1131
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
R ++ A++LF++MP +D ++W MI GY +N A+ +F +M E D T +T
Sbjct: 985 RLGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREAIAVFYKMMEEGIIPDEVTMST 1044
Query: 58 VIAGLMQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
VI+ ++ KEV +G V DV ++++ Y G ++ AL VF +P K
Sbjct: 1045 VISACAHLGVLEIGKEVHMYTVQNGF-VLDVYIGSALVDMYSKCGSLERALLVFFNLPKK 1103
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV---------NGLVREGRIVE 163
++ WN +I L A F +M V T+ GLV EGR +
Sbjct: 1104 NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIY 1163
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH-DRDLTSWKQLINGLVNSRR 222
+ D +V+ + M+ + G + A +L M + + W L++G +
Sbjct: 1164 RSMIDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLDGCRIHKN 1223
Query: 223 ID-AAISYFKQM 233
++ A I++ K M
Sbjct: 1224 LEIAEIAFNKLM 1235
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/586 (30%), Positives = 311/586 (53%), Gaps = 32/586 (5%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+ +++ L Q + + +++ M + + N ++ ++ + A +F +P +
Sbjct: 32 DKLLSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLHRFIDLKDFNNASLLFSQIPYPNEY 91
Query: 116 SWNLVIGALVNC-QRMDLAESYF---KEMGARD---------VASWTIMVNGLVREGRIV 162
++N++I L Q+ +L ++ K+ G R +A ++V + G+
Sbjct: 92 AFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLV---LNHGQCA 148
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ L + A D + +I Y G +G A +F ++ ++DL SW +I+G
Sbjct: 149 HSGVLKSGLCA-DGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGY 207
Query: 223 IDAAISYFKQMPETC-EKTWNSIISVLIRNGLVKEAH--SYLEKYPYSNIASWTNVIVG- 278
A+ F +M + E +++S+L G + + S++E + N N VG
Sbjct: 208 AGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMD-LNSFVGS 266
Query: 279 -----YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
Y + G++ SA +VF+ M +DV WN MI G +N + +E + F M+ESG +P
Sbjct: 267 ALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNP 326
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D T VL+ C+ + LD G+ + A + VS A+I MYA+CG++ AL F
Sbjct: 327 DKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVF 386
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD--FKPDDITFVGVLSACSYAGL 451
+P + +SWN++I LA+HG +++L LF+RM +P+DI+F+GVLSAC +AGL
Sbjct: 387 EDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGL 446
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
VD+GR FD M + + L P+ H++C+VDLL R G + EA + + ++ EV V G
Sbjct: 447 VDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEV---VLG 503
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
ALLGAC+ N+ V E ++E+EP NSG Y+I ++++ + R +D+ R+ M++ G
Sbjct: 504 ALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRG 563
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
V K PGCSWI+I + H F +GD H + ++NLL+ E++ E
Sbjct: 564 VTKTPGCSWIEIENQVHEFHAGDVLHFISQDMCQVINLLNEEMKVE 609
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 147/318 (46%), Gaps = 64/318 (20%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-------------------- 48
A+ +FD++ ++D V+WN MI GY + G+ +A+ LF +M
Sbjct: 180 ARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGD 239
Query: 49 -----------------ERDM--FTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
E D+ F + +I + ++ A+ VFD M +DVVTWN+M
Sbjct: 240 LGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAM 299
Query: 90 ISGYVCNGLIDEALRVFHGM----------PLKDVVSWNLVIGALVNCQRMDLAESYFKE 139
I+GY NG+ DEA+ +F GM L V+S IGAL + +D +Y E
Sbjct: 300 ITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLD---TYASE 356
Query: 140 MGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
G + D+ T +++ + G + +A ++F+ MP K+ +WN MI+ +G + L
Sbjct: 357 RGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSL 416
Query: 199 FQKMHDR------DLTSWKQLINGLVNSRRIDAAISYFKQMPETCE-----KTWNSIISV 247
F++M + S+ +++ V++ +D F M + + + ++ +
Sbjct: 417 FKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDL 476
Query: 248 LIRNGLVKEAHSYLEKYP 265
L R G V EA ++EK P
Sbjct: 477 LARAGHVHEAWDFIEKMP 494
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 119/496 (23%), Positives = 206/496 (41%), Gaps = 108/496 (21%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRG--------------YFK--------NGF---------- 36
A LF ++P + +N+MIRG Y++ N F
Sbjct: 78 ASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACA 137
Query: 37 ----LDNAMCLFNQMPER----DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
L++ C + + + D +++I + + A+ VFD + +D+V+WNS
Sbjct: 138 NLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNS 197
Query: 89 MISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLA---ESYFKEMG 141
MISGY G +A+ +F M D ++ ++GA + + L E + E
Sbjct: 198 MISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVE-N 256
Query: 142 ARDVASW--TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
D+ S+ + ++ + G + AR++FD+M KDV WN MI GY NG A LF
Sbjct: 257 EMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILF 316
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
M + + K + G++++ A+ + K + T+ S
Sbjct: 317 SGMRESGVNPDKITLVGVLSACASIGALDFGKWL-----DTYAS---------------- 355
Query: 260 YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
E+ ++I T +I Y + G + A++VFE M ++ WN MI L + +E
Sbjct: 356 --ERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQES 413
Query: 320 LKFFVQMKESGPS--PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
L F +M + G + P++ +F VL+ C +D GRQ+ F +S++
Sbjct: 414 LSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQL-----------FDLMSSS-- 460
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
F VP I + ++ LA G+ +A + E+M KPD++
Sbjct: 461 ---------------FGLVP--KIEHHSCMVDLLARAGHVHEAWDFIEKM---PEKPDEV 500
Query: 438 TFVGVLSACSYAGLVD 453
+L AC VD
Sbjct: 501 VLGALLGACQKRRNVD 516
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 112/241 (46%), Gaps = 20/241 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ A+ +FD+M ++D VTWN MI GY +NG D A+ LF+ M E + + G++ +
Sbjct: 278 LSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSA 337
Query: 66 DNVQGAKEVFDGMEV--------RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
GA + ++ D+ ++I Y G +D+ALRVF MP K+ VSW
Sbjct: 338 CASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSW 397
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVA------SWTIMVNGLVREGRIVEARKLFDKM 171
N +I AL R + S FK M A S+ +++ V G + E R+LFD M
Sbjct: 398 NAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLM 457
Query: 172 PAK-----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR-DLTSWKQLINGLVNSRRIDA 225
+ ++ + M+ G V A D +KM ++ D L+ R +D
Sbjct: 458 SSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDV 517
Query: 226 A 226
+
Sbjct: 518 S 518
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 147/362 (40%), Gaps = 38/362 (10%)
Query: 27 MIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ----SDNVQGAKEVFDGMEVRD 82
+I Y + G L A +F+++ E+D+ ++N++I+G + D V E+ D D
Sbjct: 167 LITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPD 226
Query: 83 VVTWNSMISGYVCNGLID-------EALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAES 135
+T S++ C L D E V + M L V + +IG C + A
Sbjct: 227 EMTLVSILGA--CGDLGDLGLGSWIEGFVVENEMDLNSFVG-SALIGMYGKCGDLSSARR 283
Query: 136 YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
F M +DV +W M+ G + G EA LF M V + + G L + C +
Sbjct: 284 VFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVL-SACASIG 342
Query: 196 EDLFQKMHD---------RDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIIS 246
F K D D+ LI+ +D A+ F+ MP+ E +WN++IS
Sbjct: 343 ALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMIS 402
Query: 247 VLIRNGLVKEAHSYLEKYPYS------NIASWTNVIVGYFEMGEVGSAIKVFELMTTR-- 298
L +G +E+ S ++ N S+ V+ G V ++F+LM++
Sbjct: 403 ALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFG 462
Query: 299 ---DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
+ + M+ L E F +M E PD ++L C +D+
Sbjct: 463 LVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPE---KPDEVVLGALLGACQKRRNVDVSE 519
Query: 356 QI 357
++
Sbjct: 520 RV 521
>gi|345505230|gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officinale]
Length = 614
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 175/536 (32%), Positives = 281/536 (52%), Gaps = 29/536 (5%)
Query: 75 FDGMEVRDVVTWNSMISGYVC-----NGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQR 129
F +V+D WN +I + L+ L + +G+ + D S++LV+ A C R
Sbjct: 79 FAPGDVKDPFLWNLVIKSHSHGVDPRRALLWFCLMLENGISV-DKFSFSLVLKA---CSR 134
Query: 130 MDLAESYFKEMG-ARDVASWT------IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLM 182
+ + + G R W+ ++ ++ G + AR++FD+MP +D ++N M
Sbjct: 135 LGFLKGGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSM 194
Query: 183 IAGYLDNGCVGVAEDLFQKMHD--RDLTSWKQLINGLV-NSRRIDAAISYFKQMPETCEK 239
I GY+ G + A +LF M ++L SW +I+G S ++ A F +MPE
Sbjct: 195 IDGYIKCGLIESARELFDLMPREMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLI 254
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
+WNS+I +++G +++A P ++ +W +I GY ++G V A +F+ M RD
Sbjct: 255 SWNSLIYGYVKHGRMEDAKDLFHVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRD 314
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
V +N M+ G +N E L+ F M KES +PD T VL+ + L L +H
Sbjct: 315 VVAYNSMMAGYVQNRHHMEALEIFSDMEKESHLTPDETTLVIVLSAIAQLGQLSKAMDMH 374
Query: 359 AQAIKIARNQF---TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
+ I QF + A+I MY++CG+IQ A+ F + I WN++I GLA HG
Sbjct: 375 ---LYIVEKQFYLGGKLGVALIDMYSKCGSIQQAMCVFEGIENKSIDHWNAMIGGLAIHG 431
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
E A + + +PD ITFVGVL+ACS++GLV +G F+ M+ K+ ++PR HY
Sbjct: 432 LGESAFNILLEIERRSIEPDYITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY 491
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
C+VDLL R G I+ A NL+ E+ IE + +W L AC H ++GE+ + ++
Sbjct: 492 GCMVDLLSRCGSIELAKNLIEEM---PIEPNDVIWRTFLTACNHHKEFEIGELVAKHLIL 548
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
N Y++L+ MY S GR +D + + MKE ++K PGCSWI+++ H F
Sbjct: 549 QAGYNPSSYVLLSNMYASFGRWKDVRNVRTMMKERKLQKVPGCSWIELDGRVHEFF 604
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 208/420 (49%), Gaps = 32/420 (7%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGLMQSDNVQGAKEVF 75
D +++++++ + GFL M + + + D+F N +I ++ + A+++F
Sbjct: 121 DKFSFSLVLKACSRLGFLKGGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIF 180
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWNLVI-GALVNCQRMDL 132
D M RD V++NSMI GY+ GLI+ A +F MP +K+++SWN +I G +++
Sbjct: 181 DRMPQRDSVSYNSMIDGYIKCGLIESARELFDLMPREMKNLISWNSMISGYAQTSDGVNI 240
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A F EM +D+ SW ++ G V+ GR+ +A+ LF MP +DV W MI GY G V
Sbjct: 241 ASKLFAEMPEKDLISWNSLIYGYVKHGRMEDAKDLFHVMPRRDVVTWATMIDGYAKLGFV 300
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSIISV 247
A+ LF +M RD+ ++ ++ G V +R A+ F M + E T ++S
Sbjct: 301 HKAKTLFDQMPHRDVVAYNSMMAGYVQNRHHMEALEIFSDMEKESHLTPDETTLVIVLSA 360
Query: 248 LIRNGLVKEA---HSYL-EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+ + G + +A H Y+ EK Y +I Y + G + A+ VFE + + + W
Sbjct: 361 IAQLGQLSKAMDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQQAMCVFEGIENKSIDHW 420
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLGRQ 356
N MI GL + LGE ++++ PD TF VL CS L +L R+
Sbjct: 421 NAMIGGLAIHGLGESAFNILLEIERRSIEPDYITFVGVLNACSHSGLVKEGLLCFELMRR 480
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYH 414
H ++ M+ + +RCG+I+ A L+E + +D+I W + + +H
Sbjct: 481 KHKIEPRLQH------YGCMVDLLSRCGSIELAKNLIEEMPIEPNDVI-WRTFLTACNHH 533
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 195/397 (49%), Gaps = 25/397 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTVIAGLMQ-S 65
A+ +FD+MPQRD+V++N MI GY K G +++A LF+ MP +++ ++N++I+G Q S
Sbjct: 176 ARQIFDRMPQRDSVSYNSMIDGYIKCGLIESARELFDLMPREMKNLISWNSMISGYAQTS 235
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D V A ++F M +D+++WNS+I GYV +G +++A +FH MP +DVV+W +I
Sbjct: 236 DGVNIASKLFAEMPEKDLISWNSLIYGYVKHGRMEDAKDLFHVMPRRDVVTWATMIDGYA 295
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK-----DVQAWN 180
+ A++ F +M RDV ++ M+ G V+ +EA ++F M + D
Sbjct: 296 KLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNRHHMEALEIFSDMEKESHLTPDETTLV 355
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN----SRRIDAAISYFKQMPET 236
++++ G + A D+ + ++ +L L++ I A+ F+ +
Sbjct: 356 IVLSAIAQLGQLSKAMDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQQAMCVFEGIENK 415
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYFEMGEVGSAIKVF 292
WN++I L +GL + A + L + +I ++ V+ G V + F
Sbjct: 416 SIDHWNAMIGGLAIHGLGESAFNILLEIERRSIEPDYITFVGVLNACSHSGLVKEGLLCF 475
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEG-LKFFVQMKESGP-SPDNATFTSVLTICSDLPT 350
ELM + + +G + L G ++ + E P P++ + + LT C+
Sbjct: 476 ELMRRKHKIEPRLQHYGCMVDLLSRCGSIELAKNLIEEMPIEPNDVIWRTFLTACNHHKE 535
Query: 351 LDLGRQIHAQAIKIA---RNQFTTVSNAMITMYARCG 384
++G + I A + + +SN MYA G
Sbjct: 536 FEIGELVAKHLILQAGYNPSSYVLLSN----MYASFG 568
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 191/600 (31%), Positives = 301/600 (50%), Gaps = 56/600 (9%)
Query: 42 CLFNQMPERDMFTYNTVIA--GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLI 99
CLF D F+ + ++A L S ++ A+ VF+ + T NS+I GY L
Sbjct: 67 CLF-----VDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLP 121
Query: 100 DEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREG 159
+A+ + M L+ + +L FK G ++ EG
Sbjct: 122 RQAILFYQLMMLQGLDPDRFTFPSL------------FKSCG-------------VLCEG 156
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
+ + A D N ++ Y + GC+ A +F KM ++ + SW +I
Sbjct: 157 KQLHCHSTKLGF-ASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQ 215
Query: 220 SRRIDAAISYFKQMP----ETCEKTWNSIISVLIRN---GLVKEAHSYLEKYPYSNIASW 272
AI F++M + E T ++++ R+ K+ H Y+++
Sbjct: 216 WDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVL 275
Query: 273 TNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
T+ ++ Y + G A +F M +++ WN+MI G E+ EE L F +M+ SG
Sbjct: 276 TSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGV 335
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
D T S+L C+ L L+LG+ +H K + A++ MYA+CG+I+SA+
Sbjct: 336 KGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMR 395
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F +P D+++W ++I GLA G KALELF M++++ KPD ITFVGVL+ACS+AGL
Sbjct: 396 VFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGL 455
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT--V 509
V++G YF+ M NKY +QP HY C+VD+LGR G I EA +L+ + ++P V
Sbjct: 456 VNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQ-----NMPMAPDYFV 510
Query: 510 WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
LL ACRIH N+ V E A ++++EL+P N G Y++L+ +Y S E AK++ M E
Sbjct: 511 LVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVE 570
Query: 570 NGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHR--------LRYLLNLLHTEIEREILFD 621
+KK PGCS I++ H F+ GD SHP+ +R L + + + E+LFD
Sbjct: 571 RNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFD 630
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 187/475 (39%), Gaps = 97/475 (20%)
Query: 34 NGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR----DVVTWNSM 89
+G L A +FNQ+P FT N++I G + + A + M ++ D T+ S+
Sbjct: 87 SGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSL 146
Query: 90 IS--GYVCNGLIDEALRVFHGMPLK-----DVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
G +C G + H K D N ++ NC + A F +M
Sbjct: 147 FKSCGVLCEG------KQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVN 200
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKM--------------------------PAKDV 176
+ V SW M+ + EA KLF +M AK V
Sbjct: 201 KSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQV 260
Query: 177 QAW-------------NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
+ + ++ Y GC +A DLF KM +++L W +ING V
Sbjct: 261 HKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDY 320
Query: 224 DAAISYFKQMPETCEK----TWNSIISVLIRNG---LVKEAHSYLEKYPYS-NIASWTNV 275
+ A+S F +M + K T S++ G L K H Y+EK ++A T +
Sbjct: 321 EEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTAL 380
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ Y + G + SA++VF+ M +DV W +I GL G + L+ F +M+ S PD
Sbjct: 381 VDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDA 440
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
TF VL CS HA + N+ N+M Y IQ +
Sbjct: 441 ITFVGVLAACS-----------HAGLV----NEGIAYFNSMPNKYG----IQPS------ 475
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAG 450
I + ++ L G +A +L + M + PD VG+LSAC G
Sbjct: 476 -----IEHYGCMVDMLGRAGRIAEAEDLIQNMPMA---PDYFVLVGLLSACRIHG 522
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A++LF+KMP+++ WN+MI G+ ++ + A+ LFN+M + +A L+ +
Sbjct: 292 ARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTH 351
Query: 69 QGAKEVFDGMEVR--------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
GA E+ + V DV +++ Y G I+ A+RVF MP KDV++W +
Sbjct: 352 LGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTAL 411
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAK-- 174
I L C + A F EM +V I G++ G + E F+ MP K
Sbjct: 412 IVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYG 471
Query: 175 ---DVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
++ + M+ G + AEDL Q M
Sbjct: 472 IQPSIEHYGCMVDMLGRAGRIAEAEDLIQNM 502
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 133/315 (42%), Gaps = 56/315 (17%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGLMQ 64
A+ +FDKM + V+W MI Y + A+ LF +M + + T V+ +
Sbjct: 191 ARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACAR 250
Query: 65 SDNVQGAKEV-----------------------------------FDGMEVRDVVTWNSM 89
S +++ AK+V F+ M +++ WN M
Sbjct: 251 SRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIM 310
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA-LVNCQRMDLAE------SYF-KEMG 141
I+G+V + +EAL +F+ M L V + + + L+ C + E Y KE
Sbjct: 311 INGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKI 370
Query: 142 ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
DVA T +V+ + G I A ++F +MP KDV W +I G G A +LF +
Sbjct: 371 EVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHE 430
Query: 202 MH----DRDLTSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWNSIISVLIRNG 252
M D ++ ++ ++ ++ I+YF MP + + + ++ +L R G
Sbjct: 431 MQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAG 490
Query: 253 LVKEAHSYLEKYPYS 267
+ EA ++ P +
Sbjct: 491 RIAEAEDLIQNMPMA 505
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 224/377 (59%), Gaps = 7/377 (1%)
Query: 243 SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
S+I + ++ G++ +A +K ++ASW +I GY + GE+G A +FE M R++
Sbjct: 221 SLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVS 280
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGP--SPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W MI G +N E+ L F +M + G P+ T SVL C+ L+ GR+IH
Sbjct: 281 WTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDF 340
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH--DIISWNSIICGLAYHGYAE 418
A I + ++V A+ MYA+C ++ A F + + ++I+WN++I A HG
Sbjct: 341 ANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGV 400
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
+A+ +FE M +PD +TF+G+LS CS++GL+D G +F+ M + ++PR HY CV
Sbjct: 401 EAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACV 460
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
VDLLGR G + EA L++++ ++ P+VWGALL ACR H N+++ E+A R+ LEP
Sbjct: 461 VDLLGRAGRLVEAKELISQMP---MQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEP 517
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+NSG Y++L+ +Y G E+ K++ A +K G+KK PGCSWI+IN H+F+ D SHP
Sbjct: 518 DNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHP 577
Query: 599 KFHRLRYLLNLLHTEIE 615
+ + L L +I+
Sbjct: 578 QAKEIYKFLEALPEKIK 594
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 185/422 (43%), Gaps = 45/422 (10%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLID------EA 102
+ + F ++A S ++ A VFD ++ + +NS+I Y +G EA
Sbjct: 109 QPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEA 168
Query: 103 LRVFHGMPL-KDVVSWNLVIGALVNCQRMDLAESYFKEMGAR-----DVASWTIMVNGLV 156
H + L D + V+ + + R+ + + G R D +++ V
Sbjct: 169 YARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQ-GLRVGLEGDFYVGASLIDMYV 227
Query: 157 REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLING 216
+ G I +ARKLFDKM +D+ +WN +IAGY+ G +GVAEDLF++M R++ SW +I+G
Sbjct: 228 KCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISG 287
Query: 217 LVNSRRIDAAISYFKQMPE---TCEKTWNSIISVL--------IRNGLVKEAHSYLEKYP 265
+ + A+ F +M + + W +I+SVL + G + H +
Sbjct: 288 YTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERG--RRIHDFANGIG 345
Query: 266 YSNIASWTNVIVG-YFEMGEVGSAIKVFELMTT--RDVTVWNVMIFGLGENDLGEEGLKF 322
+S + G Y + + A F+++ +++ WN MI + G E +
Sbjct: 346 LHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSI 405
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ-------IHAQAIKIARNQFTTVSNA 375
F M +G PD TF +L+ CS +D G IH+ ++ + V
Sbjct: 406 FENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRV--EHYACV--- 460
Query: 376 MITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELFERMRLTDFKP 434
+ + R G + A S +P+ S W +++ H E A EL R RL +P
Sbjct: 461 -VDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIA-ELAAR-RLFVLEP 517
Query: 435 DD 436
D+
Sbjct: 518 DN 519
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 133/266 (50%), Gaps = 33/266 (12%)
Query: 27 MIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
+I Y K G + +A LF++M RDM ++N +IAG M+ + A+++F+ ME R++V+W
Sbjct: 222 LIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSW 281
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKD----VVSWNLVIGALVNCQRMDLAESYFKEMGA 142
+MISGY NG ++AL +F M L+D +W ++ L C A+S E G
Sbjct: 282 TAMISGYTQNGFAEQALGLFDEM-LQDGSEMKPNWVTIVSVLPAC-----AQSAALERGR 335
Query: 143 R------------DVASWTIMVNGLVREGRIVEARKLFDKMP--AKDVQAWNLMIAGYLD 188
R + + T + + +VEAR FD + K++ AWN MI Y
Sbjct: 336 RIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYAS 395
Query: 189 NGC----VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEK 239
+GC V + E++ + D ++ L++G +S IDA +++F M E +
Sbjct: 396 HGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVE 455
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYP 265
+ ++ +L R G + EA + + P
Sbjct: 456 HYACVVDLLGRAGRLVEAKELISQMP 481
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 19/257 (7%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P +++ + + + LG+Q HAQ + ++ M+ MYA G++ SA++
Sbjct: 75 PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134
Query: 393 FSSVPIHDIISWNSIICGLAYHG---YAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F + + +NSII HG LE + RM D+ T VL +C+
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADL 194
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHY---TCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
V GR C+ + + ++D+ + G+I +A L +++ I
Sbjct: 195 SRVCMGR----CVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKM----IVRD 246
Query: 507 PTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQ 566
W AL+ I V E ER +E N + + Y G E A +F +
Sbjct: 247 MASWNALIAGYMKEGEIGVAEDLFER---MEHRNIVSWTAMISGYTQNGFAEQALGLFDE 303
Query: 567 MKENGVKKEPGCSWIQI 583
M ++G + +P +W+ I
Sbjct: 304 MLQDGSEMKP--NWVTI 318
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 187/639 (29%), Positives = 311/639 (48%), Gaps = 31/639 (4%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++A +F +MP + + WN I ++ L + LF +M + I ++Q+
Sbjct: 184 LEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQA 243
Query: 66 DNVQGA---KEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
GA + G R DV N +IS Y NG ++ A RVF M ++ SW
Sbjct: 244 CGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSW 303
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARD----VASWTIMVNGLVREGRIVEARKLFDKMPA 173
N +I + ++ A S F E+ + D + +W +++G G E + +M
Sbjct: 304 NSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQG 363
Query: 174 KDVQAWNLMIAGYLDN----GCVGVAED----LFQKMHDRDLTSWKQLINGLVNSRRIDA 225
+ + + + L G + + ++ + + D D+ LI+ V + + +
Sbjct: 364 EGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTS 423
Query: 226 AISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNI----ASWTNVIVGYFE 281
A + F M WNS++S G+ ++A L + I +W +I GY
Sbjct: 424 AQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAM 483
Query: 282 MGEVGSAIKVFE----LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
G A+ V L T +V W +I G + + LKFF QM++ G P++A+
Sbjct: 484 WGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSAS 543
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP 397
T +L C+ L L G++IH +I+ + V+ A+I MY++ ++++A F +
Sbjct: 544 ITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQ 603
Query: 398 IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRY 457
+ SWN +I G A G ++A+ +F M+ PD ITF +LSAC +GL+ +G
Sbjct: 604 NKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWK 663
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
YFD M Y + PR HY C+VDLLGR G +DEA +L++ + ++ T+WGALLG+C
Sbjct: 664 YFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMP---LKPDATIWGALLGSC 720
Query: 518 RIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPG 577
RIH N+K E A + + +LEPNNS Y+++ +Y R ED + M GV+
Sbjct: 721 RIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQV 780
Query: 578 CSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
SWIQIN HVF S + HP ++ + L L +E+++
Sbjct: 781 WSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKK 819
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 145/627 (23%), Positives = 255/627 (40%), Gaps = 131/627 (20%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N +++ A+ +FD M R+T +WN MI Y GFL++A LF ++ DM
Sbjct: 281 KNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDM--------- 331
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF--------------- 106
D+VTWN ++SG+ +G +E L +
Sbjct: 332 ------------------KPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSM 373
Query: 107 -------------------HGMPLK-----DVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
HG L+ DV +I V + A++ F M
Sbjct: 374 TSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKN 433
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKMPAK----DVQAWNLMIAGYLDNGCVGVAEDL 198
R++ +W +V+G +G +A +L ++M + D+ WN MI+GY GC A +
Sbjct: 434 RNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAV 493
Query: 199 FQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
+ LT SW LI+G + ++ +F QM + ++ I+ L+R
Sbjct: 494 LHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACAS 553
Query: 255 -------KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVM 306
KE H + + ++ T +I Y + + +A KVF + + + WN M
Sbjct: 554 LSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCM 613
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
I G LG+E + F +M++ G PD TFT++L+ C + + G +
Sbjct: 614 IMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYF-------- 665
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
++MIT ++ VP + + ++ L GY ++A +L
Sbjct: 666 -------DSMIT-------------DYRIVP--RLEHYCCMVDLLGRAGYLDEAWDLIHT 703
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQP-RSAHYTCVVDLLGRF 485
M L KPD + +L +C + ++ KN + L+P SA+Y +++L F
Sbjct: 704 MPL---KPDATIWGALLGSCR---IHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIF 757
Query: 486 GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH---NNIKVGEIAGERVMELEPNNSG 542
++ +L + A G+ + VW + R+H ++ K AG+ EL
Sbjct: 758 NRWEDMDHLRELMGAAGVR-NRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFEL------ 810
Query: 543 VYLILTEMYLSCGRREDAKRIFAQMKE 569
Y +++EM G D ++ M E
Sbjct: 811 -YQLVSEMK-KLGYVPDVNCVYQNMDE 835
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 136/332 (40%), Gaps = 55/332 (16%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N + AQ +FD M R+ WN ++ GY G ++A+ L NQM +
Sbjct: 416 VKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEK----------- 464
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP----LKDVVS 116
+G K D+VTWN MISGY G EAL V H +VVS
Sbjct: 465 --------EGIKP--------DLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVS 508
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDV----ASWTIMVNG-----LVREGRIVEARKL 167
W +I + +F +M V AS T ++ L+++G+ + +
Sbjct: 509 WTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSI 568
Query: 168 FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
+ +DV +I Y + + A +F+++ ++ L SW +I G AI
Sbjct: 569 RNGF-IEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAI 627
Query: 228 SYFKQM------PETCEKTWNSIISVLIRNGLVKEAHSYLEKY--PYSNIASWTNVIVGY 279
S F +M P+ T+ +++S +GL+ E Y + Y + +
Sbjct: 628 SVFNEMQKVGVGPDAI--TFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMV 685
Query: 280 FEMGEVGSAIKVFELMTTR----DVTVWNVMI 307
+G G + ++L+ T D T+W ++
Sbjct: 686 DLLGRAGYLDEAWDLIHTMPLKPDATIWGALL 717
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 121/306 (39%), Gaps = 45/306 (14%)
Query: 254 VKEAHSYLEKYP--YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI--FG 309
VK H+ + K P ++ A+ N+I Y G+ SA VF + R+ WN + F
Sbjct: 49 VKMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFK 108
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
L L+ F ++ G D+ ++ L C+ + + LG +IH IK +
Sbjct: 109 SSAGSL-HIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLD 167
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRL 429
+ A++ Y RC ++ A F +P + + WN I +K +ELF +M+
Sbjct: 168 VYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQF 227
Query: 430 TDFKPDDITFVGVLSAC-----------------------------------SYAGLVDQ 454
+ K + T V VL AC S G ++
Sbjct: 228 SFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLEL 287
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALL 514
R FD M+N+ ++ + ++ G +++A +L E+ + ++ W LL
Sbjct: 288 ARRVFDSMENR-----NTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLL 342
Query: 515 GACRIH 520
+H
Sbjct: 343 SGHFLH 348
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/378 (37%), Positives = 221/378 (58%), Gaps = 7/378 (1%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
S+I + + G + +A + +++SW ++ GY + G + +A+ +FE M R++
Sbjct: 173 TSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIV 232
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQM--KESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
W MI G ++ L ++ L F +M ++SG P+ T SVL C+ L TL+ GRQIH
Sbjct: 233 SWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHE 292
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD--IISWNSIICGLAYHGYA 417
A ++ N +V A+ MYA+CG++ A F + ++ +I+WN++I A +G+
Sbjct: 293 LACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHG 352
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
+A+ F M +PDDITF G+LS CS++GLVD G YF+ M Y + PR HY C
Sbjct: 353 LQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYAC 412
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
V DLLGR G + EA L+ E+ + P++WG+LL ACR H N+++ E A ++ LE
Sbjct: 413 VADLLGRAGRLAEASKLVGEMP---MPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLE 469
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
P N+G Y++L+ MY GR ++ ++ A +K G KK PGCSWI+IN H+FL GD+SH
Sbjct: 470 PENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSH 529
Query: 598 PKFHRLRYLLNLLHTEIE 615
P+ + L L +++
Sbjct: 530 PQGKEIYMFLEALPEKMK 547
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 141/304 (46%), Gaps = 28/304 (9%)
Query: 18 QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
Q D +I Y K G +++A +F+ M RD+ ++N ++AG +S + A +F+
Sbjct: 166 QFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFER 225
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV---VSWNLVIGALVNCQRMDLAE 134
M R++V+W +MISGY +GL +AL +F M +D +W ++ L C ++ E
Sbjct: 226 MPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLE 285
Query: 135 SYFK------EMGARDVASWTIMVNGL-VREGRIVEARKLFDKM--PAKDVQAWNLMIAG 185
+ MG AS I + + + G +V+AR FDK+ K++ AWN MI
Sbjct: 286 RGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITA 345
Query: 186 YLDNG----CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE--- 238
Y G V ++ Q D ++ L++G +S +D + YF M T
Sbjct: 346 YASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINP 405
Query: 239 --KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS-WTNVIVGY-----FEMGEVGSAIK 290
+ + + +L R G + EA + + P S W +++ EM E +A K
Sbjct: 406 RVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAET-AARK 464
Query: 291 VFEL 294
+F L
Sbjct: 465 LFVL 468
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 39/238 (16%)
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
D TF VL +L ++ +G+ +H ++I V+ ++I +Y +CG I A F
Sbjct: 133 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 192
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
++ I D+ SWN+++ G G + AL +FERM + +++ ++S S +GL
Sbjct: 193 DNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNI----VSWTTMISGYSQSGLAQ 248
Query: 454 QGRYYFDCM-KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
Q FD M K ++P V+ + ++ ++E+
Sbjct: 249 QALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQ-IHEL-------------- 293
Query: 513 LLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
ACR+ N +N+ V + LT MY CG DA+ F ++ N
Sbjct: 294 ---ACRMGLN----------------SNASVLIALTAMYAKCGSLVDARNCFDKLNRN 332
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 8 EAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+A+N FDK+ +++ + WN MI Y G A+ F +M + D T+ +++G
Sbjct: 321 DARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSG 380
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLKDV 114
S V + F+ M + N + Y C G + EA ++ MP+
Sbjct: 381 CSHSGLVDVGLKYFNHMST--TYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAG 438
Query: 115 VS-WNLVIGALVNCQRMDLAESYFKE---MGARDVASWTIMVNGLVREGRIVEARKL 167
S W ++ A + +++AE+ ++ + + ++ ++ N GR E KL
Sbjct: 439 PSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKL 495
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 224/377 (59%), Gaps = 7/377 (1%)
Query: 243 SIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV 302
S+I + ++ G++ +A +K ++ASW +I GY + GE+G A +FE M R++
Sbjct: 147 SLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVS 206
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGP--SPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
W MI G +N E+ L F +M + G P+ T SVL C+ L+ GR+IH
Sbjct: 207 WTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDF 266
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH--DIISWNSIICGLAYHGYAE 418
A I + ++V A+ MYA+C ++ A F + + ++I+WN++I A HG
Sbjct: 267 ANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGV 326
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
+A+ +FE M +PD +TF+G+LS CS++GL+D G +F+ M + ++PR HY CV
Sbjct: 327 EAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACV 386
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
VDLLGR G + EA L++++ ++ P+VWGALL ACR H N+++ E+A R+ LEP
Sbjct: 387 VDLLGRAGRLVEAKELISQMP---MQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEP 443
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+NSG Y++L+ +Y G E+ K++ A +K G+KK PGCSWI+IN H+F+ D SHP
Sbjct: 444 DNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHP 503
Query: 599 KFHRLRYLLNLLHTEIE 615
+ + L L +I+
Sbjct: 504 QAKEIYKFLEALPEKIK 520
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 142/303 (46%), Gaps = 22/303 (7%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
+++ V+ G I +ARKLFDKM +D+ +WN +IAGY+ G +GVAEDLF++M R++ SW
Sbjct: 148 LIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSW 207
Query: 211 KQLINGLVNSRRIDAAISYFKQMPE---TCEKTWNSIISVL--------IRNGLVKEAHS 259
+I+G + + A+ F +M + + W +I+SVL + G + H
Sbjct: 208 TAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERG--RRIHD 265
Query: 260 YLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTT--RDVTVWNVMIFGLGENDLG 316
+ +S + G Y + + A F+++ +++ WN MI + G
Sbjct: 266 FANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCG 325
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-- 374
E + F M +G PD TF +L+ CS +D G H + + V +
Sbjct: 326 VEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLN-HFNDMGTIHSVEPRVEHYA 384
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIIS-WNSIICGLAYHGYAEKALELFERMRLTDFK 433
++ + R G + A S +P+ S W +++ H E A EL R RL +
Sbjct: 385 CVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIA-ELAAR-RLFVLE 442
Query: 434 PDD 436
PD+
Sbjct: 443 PDN 445
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 133/266 (50%), Gaps = 33/266 (12%)
Query: 27 MIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
+I Y K G + +A LF++M RDM ++N +IAG M+ + A+++F+ ME R++V+W
Sbjct: 148 LIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSW 207
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKD----VVSWNLVIGALVNCQRMDLAESYFKEMGA 142
+MISGY NG ++AL +F M L+D +W ++ L C A+S E G
Sbjct: 208 TAMISGYTQNGFAEQALGLFDEM-LQDGSEMKPNWVTIVSVLPAC-----AQSAALERGR 261
Query: 143 R------------DVASWTIMVNGLVREGRIVEARKLFDKMP--AKDVQAWNLMIAGYLD 188
R + + T + + +VEAR FD + K++ AWN MI Y
Sbjct: 262 RIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYAS 321
Query: 189 NGC----VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEK 239
+GC V + E++ + D ++ L++G +S IDA +++F M E +
Sbjct: 322 HGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVE 381
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYP 265
+ ++ +L R G + EA + + P
Sbjct: 382 HYACVVDLLGRAGRLVEAKELISQMP 407
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 101/234 (43%), Gaps = 36/234 (15%)
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
L+ + +M G DN T VL C+DL + +GR +H Q +++ V ++I M
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 380 YARCGNIQSALLEFSSVPIHDIISWNSIIC------------------------------ 409
Y +CG I A F + + D+ SWN++I
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 410 -GLAYHGYAEKALELFERMRL--TDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
G +G+AE+AL LF+ M ++ KP+ +T V VL AC+ + +++GR D N
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHD-FANGI 270
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIH 520
L S+ T + + + + EA + I +G + W ++ A H
Sbjct: 271 GLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNL--IAWNTMITAYASH 322
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 182/600 (30%), Positives = 307/600 (51%), Gaps = 52/600 (8%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVV 84
N ++ Y K+ L+ A +F ++P+ D+F++ +I+G + +F M+ + V
Sbjct: 325 NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384
Query: 85 TWNSMISGYV--CNGLIDEAL--RVFHGMPLK-----DVVSWNLVIGALVNCQRMDLAES 135
+S + C+ ++++ + HG L+ D V N ++ V C+ AE
Sbjct: 385 PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEK 444
Query: 136 YFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
F M +D SW IM++ ++ G + ++ LF ++P KD +WN MI G + NGC VA
Sbjct: 445 LFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVA 504
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK 255
+L KM AA F ++ + S +SVL GL K
Sbjct: 505 LELLYKM---------------------VAAGPAFNKLTFSIALVLASSLSVL---GLGK 540
Query: 256 EAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELM-----------TTRDVTV- 302
+ H+ + K + N ++ Y + GE+ A +F+ + + D V
Sbjct: 541 QIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVE 600
Query: 303 ---WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
W+ M+ G +N E+ LK F M S D T TSV++ C+ L+LGRQ+H
Sbjct: 601 SVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHG 660
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
KI + +++I MY +CG++ A L F+ +++ W S+I G A HG +
Sbjct: 661 YIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGRE 720
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A+ LFE M P++++FVGVL+ACS+AGL+++G YF M+ Y ++P + H+TC+V
Sbjct: 721 AVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMV 780
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
DL GR G ++E I + I +VW + L +CR+H NI++G ++++ELEP
Sbjct: 781 DLYGRAGRLNEIKEF---IHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPF 837
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
++G Y++ + + + R E+A +I + M++ GVKK P SWIQ+ + H F+ GD SHP+
Sbjct: 838 DAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQ 897
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/522 (22%), Positives = 220/522 (42%), Gaps = 103/522 (19%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNT 57
++ +++A +F+++PQ D +W V+I G+ + G + + LF +M ++ + FT +
Sbjct: 333 KSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSI 392
Query: 58 VIAGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V+ + N + G +R D V NS++ YV A ++F M K
Sbjct: 393 VLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEK 452
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREG----------RIV 162
D VSWN+++ + + M + F+++ +D ASW M++GL+R G ++V
Sbjct: 453 DTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMV 512
Query: 163 EARKLFDKMP----------------AKDVQAWNLMIAGYLDNGCV-------------- 192
A F+K+ K + L + G LD+G V
Sbjct: 513 AAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKV-GVLDDGFVRNSLIDMYCKCGEM 571
Query: 193 GVAEDLFQKMHDR---------------DLTSWKQLINGLVNSRRIDAAISYFKQM---- 233
A +F+ + + SW +++G V + R + A+ F M
Sbjct: 572 EKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQ 631
Query: 234 PETCEKTWNSIISVLIRNGLV---KEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAI 289
E + T S++S G++ ++ H Y++K + ++ +++I Y + G + A
Sbjct: 632 VEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAW 691
Query: 290 KVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
+F R+V +W MI G + G E ++ F M G +P+ +F VLT CS
Sbjct: 692 LIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAG 751
Query: 350 TLDLG-------RQIHAQAIKIARNQFTTVSNAMITMYARCGNI--------QSALLEFS 394
L+ G R+++ I+ FT M+ +Y R G + +A+ + S
Sbjct: 752 LLEEGCKYFRLMREVY--GIRPGAEHFT----CMVDLYGRAGRLNEIKEFIHNNAISKLS 805
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
SV W S + H E + + + +L + +P D
Sbjct: 806 SV-------WRSFLSSCRVHKNIEMGIWVCK--KLLELEPFD 838
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P F+S + + P ++ +HA+ IK N ++ +YA+ N++ A
Sbjct: 289 PPLXYFSSTFSDSMNYPNSEV---LHAKLIK--NGCVGIRGNHLLNLYAKSQNLEQAHKM 343
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
F +P D+ SW +I G A G + L LF +M+ P+ T VL +CS
Sbjct: 344 FEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCS 398
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/378 (37%), Positives = 221/378 (58%), Gaps = 7/378 (1%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
S+I + + G + +A + +++SW ++ GY + G + +A+ +FE M R++
Sbjct: 210 TSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIV 269
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQM--KESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
W MI G ++ L ++ L F +M ++SG P+ T SVL C+ L TL+ GRQIH
Sbjct: 270 SWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHE 329
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD--IISWNSIICGLAYHGYA 417
A ++ N +V A+ MYA+CG++ A F + ++ +I+WN++I A +G+
Sbjct: 330 LACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHG 389
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
+A+ F M +PDDITF G+LS CS++GLVD G YF+ M Y + PR HY C
Sbjct: 390 LQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYAC 449
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
V DLLGR G + EA L+ E+ + P++WG+LL ACR H N+++ E A ++ LE
Sbjct: 450 VADLLGRAGRLAEASKLVGEMP---MPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLE 506
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
P N+G Y++L+ MY GR ++ ++ A +K G KK PGCSWI+IN H+FL GD+SH
Sbjct: 507 PENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSH 566
Query: 598 PKFHRLRYLLNLLHTEIE 615
P+ + L L +++
Sbjct: 567 PQGKEIYMFLEALPEKMK 584
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 141/304 (46%), Gaps = 28/304 (9%)
Query: 18 QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
Q D +I Y K G +++A +F+ M RD+ ++N ++AG +S + A +F+
Sbjct: 203 QFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFER 262
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV---VSWNLVIGALVNCQRMDLAE 134
M R++V+W +MISGY +GL +AL +F M +D +W ++ L C ++ E
Sbjct: 263 MPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLE 322
Query: 135 SYFK------EMGARDVASWTIMVNGL-VREGRIVEARKLFDKM--PAKDVQAWNLMIAG 185
+ MG AS I + + + G +V+AR FDK+ K++ AWN MI
Sbjct: 323 RGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITA 382
Query: 186 YLDNG----CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE--- 238
Y G V ++ Q D ++ L++G +S +D + YF M T
Sbjct: 383 YASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINP 442
Query: 239 --KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS-WTNVIVGY-----FEMGEVGSAIK 290
+ + + +L R G + EA + + P S W +++ EM E +A K
Sbjct: 443 RVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAET-AARK 501
Query: 291 VFEL 294
+F L
Sbjct: 502 LFVL 505
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 126/299 (42%), Gaps = 39/299 (13%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+ ++ Y G++ S++ VF + ++N MI E + + M G +
Sbjct: 109 SKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFT 168
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
D TF VL +L ++ +G+ +H ++I V+ ++I +Y +CG I A
Sbjct: 169 GDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKV 228
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F ++ I D+ SWN+++ G G + AL +FERM + +++ ++S S +GL
Sbjct: 229 FDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNI----VSWTTMISGYSQSGLA 284
Query: 453 DQGRYYFDCM-KNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
Q FD M K ++P V+ + ++ ++E+
Sbjct: 285 QQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQ-IHEL------------- 330
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
ACR+ N +N+ V + LT MY CG DA+ F ++ N
Sbjct: 331 ----ACRMGLN----------------SNASVLIALTAMYAKCGSLVDARNCFDKLNRN 369
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 25/265 (9%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
+ GP P ++ V + L L LG Q+HA + V + M+ YA G+
Sbjct: 62 LSAPGPPPI-LSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGD 120
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
I S++ F+ + + +NS+I A +G+AE+ + + M F D TF VL +
Sbjct: 121 IDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKS 180
Query: 446 CSYAGLVDQGRYYFDCMKN---KYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
V G+ C+ + LQ T ++ L G+ G I++A + + +
Sbjct: 181 SVELLSVWMGK----CVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRD 236
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEI-AGERVMELEP-NNSGVYLILTEMYLSCGRREDA 560
+ + W ALL K G I A + E P N + + Y G + A
Sbjct: 237 V----SSWNALLAG-----YTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQA 287
Query: 561 KRIFAQM--KENGVKKEPGCSWIQI 583
+F +M +++GV+ +W+ I
Sbjct: 288 LSLFDEMVKEDSGVRP----NWVTI 308
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 8 EAQNLFDKMP--QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+A+N FDK+ +++ + WN MI Y G A+ F +M + D T+ +++G
Sbjct: 358 DARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSG 417
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPLKDV 114
S V + F+ M + N + Y C G + EA ++ MP+
Sbjct: 418 CSHSGLVDVGLKYFNHMSTTYSI--NPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAG 475
Query: 115 VS-WNLVIGALVNCQRMDLAESYFKE---MGARDVASWTIMVNGLVREGRIVEARKL 167
S W ++ A + +++AE+ ++ + + ++ ++ N GR E KL
Sbjct: 476 PSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKL 532
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/430 (33%), Positives = 254/430 (59%), Gaps = 13/430 (3%)
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIISVLIRNGL 253
LF +M RD+ SW +I G + + A++ K+M + + T +SI+ + +
Sbjct: 155 LFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHAN 214
Query: 254 V---KEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFG 309
V KE H Y ++ + ++ +++I Y + +V ++ F L++ RD WN +I G
Sbjct: 215 VTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAG 274
Query: 310 LGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQF 369
+N ++GL FF +M + P +F+SV+ C+ L L+LG+Q+HA I++ +
Sbjct: 275 CVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDN 334
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGLAYHGYAEKALELFERM 427
++++++ MYA+CGNI+ A F+ + + D++SW +II G A HG+A A+ LFE M
Sbjct: 335 KFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEM 394
Query: 428 RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGL 487
+ KP + F+ VL+ACS+AGLVD+G YF+ M+ + + P HY V DLLGR G
Sbjct: 395 LVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGR 454
Query: 488 IDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLIL 547
++EA + ++ + G E + +VW LL ACR H NI++ E +++ ++P N G ++I+
Sbjct: 455 LEEAYDFISNM---GEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIM 511
Query: 548 TEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
+ +Y + R DA ++ +M++ G+KK P CSWI++ + H FL+GD SHP + ++ L
Sbjct: 512 SNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEAL 571
Query: 608 NLLHTEIERE 617
N+L ++E+E
Sbjct: 572 NILLEQMEKE 581
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 124/248 (50%), Gaps = 21/248 (8%)
Query: 284 EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLT 343
++ S K+F+ M RDV WN +I G +N + EE L +M + PD+ T +S+L
Sbjct: 148 KIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILP 207
Query: 344 ICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
I ++ + G++IH AI+ ++ + +++I MYA+C ++ ++ F + D IS
Sbjct: 208 IFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAIS 267
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG-------- 455
WNSII G +G ++ L F RM KP ++F V+ AC++ ++ G
Sbjct: 268 WNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYII 327
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIR-ADGIEVSPTVWGALL 514
R FD NK+ + ++D+ + G I A + N+I D VS W A++
Sbjct: 328 RLGFD--DNKFIA-------SSLLDMYAKCGNIKMARYIFNKIEMCDRDMVS---WTAII 375
Query: 515 GACRIHNN 522
C +H +
Sbjct: 376 MGCAMHGH 383
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 127/282 (45%), Gaps = 24/282 (8%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTV 58
+ +I + LFD+MP RD V+WN +I G +NG + A+ + +M + D FT +++
Sbjct: 146 SVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSI 205
Query: 59 IAGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+ + NV KE+ G +R DV +S+I Y ++ ++ FH + +D
Sbjct: 206 LPIFTEHANVTKGKEI-HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRD 264
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
+SWN +I V R D +F+ M V + + ++ + A L ++ A
Sbjct: 265 AISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHA 324
Query: 174 KDVQAW---NLMIAG-----YLDNGCVGVAEDLFQK--MHDRDLTSWKQLINGLVNSRRI 223
++ N IA Y G + +A +F K M DRD+ SW +I G
Sbjct: 325 YIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHA 384
Query: 224 DAAISYFKQM----PETCEKTWNSIISVLIRNGLVKEAHSYL 261
A+S F++M + C + ++++ GLV E Y
Sbjct: 385 LDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYF 426
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 128/319 (40%), Gaps = 53/319 (16%)
Query: 303 WNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
W +I + L L F ++ G SPD F S+L + +L + +HA I
Sbjct: 44 WICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVI 103
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSS----------------------VPIHD 400
++ + +NA++ MY++ S L EF +P+ D
Sbjct: 104 RLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRD 163
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG----- 455
++SWN++I G A +G E+AL + + M + +PD T +L + V +G
Sbjct: 164 VVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHG 223
Query: 456 ---RYYFD---------------CMKNK------YFLQPRSA-HYTCVVDLLGRFGLIDE 490
R+ FD C + + + L R A + ++ + G D+
Sbjct: 224 YAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQ 283
Query: 491 AMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE-PNNSGVYLILTE 549
+ + + ++ + +++ AC + +G+ ++ L +N + L +
Sbjct: 284 GLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLD 343
Query: 550 MYLSCGRREDAKRIFAQMK 568
MY CG + A+ IF +++
Sbjct: 344 MYAKCGNIKMARYIFNKIE 362
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 286/544 (52%), Gaps = 27/544 (4%)
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP-LKDVVSWN-----LVIGALVNCQRMD 131
++ +V WN+MI V NGLI + + M L+ + N ++ ALV+ Q +
Sbjct: 49 LDCANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVK 108
Query: 132 LAESYFKEMGARDVASWTIMVNGL----VREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
E + A + L V G + + R++FD+M + W L+I Y+
Sbjct: 109 EGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYV 168
Query: 188 DNGCVGVAE---DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTW--- 241
CV E +LF+ M + LT ++ +V++ + + K M EK+
Sbjct: 169 ---CVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEV 225
Query: 242 -----NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT 296
+++IS G + A+ + ++ P NI W +I E + ++F+ M
Sbjct: 226 DAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMP 285
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
RDV WN MI G +E L +F +M+ SG SP+ T S L+ C+ LD G
Sbjct: 286 DRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAW 345
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
IHA K N+ ++ +++I MY++CG+I A+ F D+ +W SI+CGLA HG
Sbjct: 346 IHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGR 405
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYT 476
EKAL F +M+ +PDD+T VGVLSAC++AGL+DQG +YF M+ + L P+ HY
Sbjct: 406 GEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYG 465
Query: 477 CVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMEL 536
+VDLLGR G + EA +L I +E + +WGA L ACR+HNN+++GE+A R++ L
Sbjct: 466 XMVDLLGRMGCLKEAYDL---IMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGL 522
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSS 596
P + ++L+ MY + + + + ++K+ G+KK PGCS I++N H FL GD+S
Sbjct: 523 XPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNS 582
Query: 597 HPKF 600
HP +
Sbjct: 583 HPCY 586
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 203/477 (42%), Gaps = 63/477 (13%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQM--------PERDMFTY---------------- 55
+ WN MIR +NG + L M P F Y
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 56 ---NTVIAGLMQSDNVQGA--------------KEVFDGMEVRDVVTWNSMISGYVCNGL 98
+ V G S+ V GA ++VFD M +V W +I YVC
Sbjct: 113 VHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTF 172
Query: 99 IDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAESY--FKEMGARDVASW--TI 150
++AL +F M D+V+ + V+ A + +A++ F E +V ++ +
Sbjct: 173 PEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSST 232
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
+++ G + A + F + P K++ WN MI +++ + + + LFQ M DRD+ SW
Sbjct: 233 LISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSW 292
Query: 211 KQLINGLVNSRRIDAAISYFKQMP----ETCEKTWNSIISVLIRNGLVKEA---HSYLEK 263
+I G + A+++F +M T S +S +G + H+Y++K
Sbjct: 293 NSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDK 352
Query: 264 YPYSNIASW-TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
+ S +++I Y + G++ A+++FE T RD+ W ++ GL + GE+ L +
Sbjct: 353 NDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHY 412
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--AMITMY 380
F +MKE+ PD+ T VL+ C+ LD G + Q+++ V + M+ +
Sbjct: 413 FSKMKEAQVQPDDVTMVGVLSACAHAGLLDQG-WWYFQSMEKVFGLVPKVEHYGXMVDLL 471
Query: 381 ARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
R G ++ A +P+ + I W + + H E E+ R RL P D
Sbjct: 472 GRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELG-EVAAR-RLLGLXPRD 526
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 132/310 (42%), Gaps = 53/310 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIA- 60
+ + + +FD+M Q V W ++IR Y F + A+ LF M E DM +TV++
Sbjct: 142 VGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSA 201
Query: 61 -GLMQSDNVQGAKEVF---DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
GL+ V A F G+EV D +++IS Y G +D A R F P+K++V
Sbjct: 202 CGLLGDLGVAKAMHCFIEKSGIEV-DAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVV 260
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP---- 172
WN +I V ++L + F+ M RDV SW M+ G R G+ EA F +M
Sbjct: 261 WNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGV 320
Query: 173 ------------------AKDVQAW-----------------NLMIAGYLDNGCVGVAED 197
A D AW + +I Y G + A
Sbjct: 321 SPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQ 380
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC----EKTWNSIISVLIRNGL 253
+F++ RDL +W ++ GL R + A+ YF +M E + T ++S GL
Sbjct: 381 IFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGL 440
Query: 254 VKEAHSYLEK 263
+ + Y +
Sbjct: 441 LDQGWWYFQS 450
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 151/371 (40%), Gaps = 61/371 (16%)
Query: 162 VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR 221
VE ++ +V WN MI ++NG + L M GL
Sbjct: 40 VEDPSAASRLDCANVFVWNTMIRKQVENGLITRDPPLLYYMQ------------GLRAGL 87
Query: 222 RIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNVIVG 278
R + T+ ++ L+ VKE H+ + + ++ + ++G
Sbjct: 88 RPNG-------------HTFMYLLKALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLG 134
Query: 279 YF-EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
++ G VG +VF+ M + +W ++I E+ L+ F M+E G +PD
Sbjct: 135 FYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVA 194
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL------- 390
++V++ C L L + + +H K VS+ +I+ Y CG++ A
Sbjct: 195 VSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETP 254
Query: 391 -------------------LE-----FSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
LE F S+P D++SWNS+I G A G ++AL F
Sbjct: 255 MKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHE 314
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
M + P+ +T + LSAC+ G +D G + +K + + + ++D+ + G
Sbjct: 315 MEFSGVSPNALTLLSTLSACASHGALDTGA-WIHAYVDKNDMNRDGSLDSSLIDMYSKCG 373
Query: 487 LIDEAMNLLNE 497
ID+A+ + E
Sbjct: 374 DIDKAVQIFEE 384
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/667 (27%), Positives = 326/667 (48%), Gaps = 61/667 (9%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDN 67
A +FD+MP ++T++ N+MI G+ K G L A LF+ M ER ++ +I G +QS+
Sbjct: 61 HAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQ 120
Query: 68 VQGAKEVFDGMEV----RDVVTWNSMISGY----VCNGLIDEALRVFHGMPLKDVVSWNL 119
+ A ++ M D VT +++SG+ N ++ V +++ N
Sbjct: 121 SKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNS 180
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++ A + LA FK M +D ++ ++ G EG EA +LF ++ ++
Sbjct: 181 LVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPS 240
Query: 180 NLMIAGYLDNGCVGVAEDLF-QKMHDRDLTS---WKQLI-NGLVN----SRRIDAAISYF 230
+ A L + VG+ + F Q++H L + W + N L++ ++D F
Sbjct: 241 DFTFAALL-SAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLF 299
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEK----------YPYSNIASWTN------ 274
+MPE ++N +I+ NG KE+ K +P++ + S
Sbjct: 300 YEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLR 359
Query: 275 ---------VIVG--------------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLG 311
+ VG Y + A K+F+ + + W MI
Sbjct: 360 MGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYV 419
Query: 312 ENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT 371
+ EEG+ F M+ +G D ATF S+L C++L ++ LGRQ+H+ I+
Sbjct: 420 QKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVY 479
Query: 372 VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD 431
+A++ YA+CG + A+ F +P + +SWN++I A +G + L F++M +
Sbjct: 480 SGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSG 539
Query: 432 FKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEA 491
+KPD ++F+ VLSACS+ G V++ ++F+ M Y + P+ HYT +VD+L R G DEA
Sbjct: 540 YKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEA 599
Query: 492 MNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP-NNSGVYLILTEM 550
L+ E+ E S +W ++L +CRIH N ++ + A +R+ +E ++ Y+ ++ +
Sbjct: 600 EKLMTEM---PFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNI 656
Query: 551 YLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
Y G+ ++ ++ M++ GV+K P SW++I HVF + D SHP+ ++ +N L
Sbjct: 657 YAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINAL 716
Query: 611 HTEIERE 617
E+E++
Sbjct: 717 SKEMEKK 723
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 205/458 (44%), Gaps = 41/458 (8%)
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
VN + G +V A ++FD+MPAK+ + N+MI+G+L G + A +LF M +R SW
Sbjct: 50 VNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWT 109
Query: 212 QLINGLVNSRRIDAAISYFKQMPE-TCEKTWNSIISVLIRNG------LVKEAHSYLEKY 264
LI G + S + A + M E + +++++L G ++ + H+++ K
Sbjct: 110 ILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKL 169
Query: 265 PYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
Y N+ +++ Y + + A ++F+ M +D +N ++ G L EE ++ F
Sbjct: 170 GYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF 229
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
+++ SG P + TF ++L+ L G+Q+H +K V NA++ Y++
Sbjct: 230 LELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKH 289
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
+ F +P D IS+N +I A++G +++ +LF +++ T F F +L
Sbjct: 290 DQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLL 349
Query: 444 SACSYAGLVDQGR-----------------------YYFDCMKNKYFLQ-------PRSA 473
S + + + GR Y C +K + +
Sbjct: 350 SIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTV 409
Query: 474 HYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV 533
+T ++ + G +E +N+ +++R G+ + ++L AC +I +G +
Sbjct: 410 PWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLL 469
Query: 534 MELEPNNSGVY--LILTEMYLSCGRREDAKRIFAQMKE 569
+ S VY L + Y CG DA + F +M E
Sbjct: 470 IR-SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPE 506
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 167/398 (41%), Gaps = 36/398 (9%)
Query: 198 LFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA 257
LFQ + R+ + K +N ++ IDA I P TC + ++ + G + A
Sbjct: 8 LFQNLVLRNSPAPKPSLN---SNHLIDAHIVKTGFNPNTCRSNFQ--VNNFLERGDLVHA 62
Query: 258 HSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
H ++ P N S +I G+ + G++ A ++F+ M R W ++I G +++ +
Sbjct: 63 HQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSK 122
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
E + + M+ G PD T ++L+ +L T ++ QIH IK+ V N+++
Sbjct: 123 EAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLV 182
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
Y + + A F + D +++NS++ G + G E+A+ELF + + KP D
Sbjct: 183 DAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDF 242
Query: 438 TFVGVLSAC----------SYAGLVDQGRYYFDCMKNKYFLQPRSAH------------- 474
TF +LSA G V + + ++ L S H
Sbjct: 243 TFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEM 302
Query: 475 -------YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
Y V+ G E+ +L +++ + + LL N+++G
Sbjct: 303 PELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGR 362
Query: 528 IAGERVMELEPN-NSGVYLILTEMYLSCGRREDAKRIF 564
+ + + N S V L +MY C ++A++IF
Sbjct: 363 QIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIF 400
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 188/642 (29%), Positives = 308/642 (47%), Gaps = 83/642 (12%)
Query: 52 MFTYNTVIAGLMQSDNV---------QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEA 102
MFT+ + IA + NV + FD ++ RDV WN MISGY G E
Sbjct: 10 MFTHFSDIALICNQPNVSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEV 69
Query: 103 LRVF--------------------------------HGMPLKDVVSWNLVIGALV----- 125
+R F H + LK W++ + A +
Sbjct: 70 IRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYS 129
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD---------- 175
+ + A F EM RD+ SW M++G + G EA L + + A D
Sbjct: 130 RYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSA 189
Query: 176 ----------VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
V + I L++ + + +F +M+ RDL SW +I + +
Sbjct: 190 CTEAGDFNRGVTIHSYSIKHGLESELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR 249
Query: 226 AISYFKQM------PETCEKTWNSIISVLIRNGLVKEAHSY----LEK-YPYSNIASWTN 274
AIS F++M P+ T S+ S+L + G ++ S L K + +I
Sbjct: 250 AISLFQEMRLSRIQPDCL--TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNA 307
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP-SP 333
V+V Y ++G V SA VF + DV WN +I G +N E ++ + M+E G +
Sbjct: 308 VVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 367
Query: 334 DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEF 393
+ T+ SVL CS L G ++H + +K V ++ MY +CG ++ AL F
Sbjct: 368 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 427
Query: 394 SSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVD 453
+P + + WN++I +HG+ EKA+ LF+ M KPD ITFV +LSACS++GLVD
Sbjct: 428 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 487
Query: 454 QGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGAL 513
+G++ F+ M+ Y + P HY C+VD+ GR G ++ A+ I++ ++ ++WGAL
Sbjct: 488 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF---IKSMSLQPDASIWGAL 544
Query: 514 LGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVK 573
L ACR+H N+ +G+IA E + E+EP + G +++L+ MY S G+ E I + G++
Sbjct: 545 LSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLR 604
Query: 574 KEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
K PG S +++++ VF +G+ +HP + + L L +++
Sbjct: 605 KTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 646
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 207/485 (42%), Gaps = 84/485 (17%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
NARI LFD+MP RD +WN MI GY ++G A+ L N + D T ++++
Sbjct: 136 NARI-----LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSAC 190
Query: 63 --------------------MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEA 102
++S+ ++ ++VFD M VRD+++WNS+I Y N A
Sbjct: 191 TEAGDFNRGVTIHSYSIKHGLESELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRA 250
Query: 103 LRVFHGMPLKDVVSWNLVIGALV-------------NCQRMDLAESYFKEMGARDVASWT 149
+ +F M L + L + +L + Q L + +F E D+
Sbjct: 251 ISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE----DITIGN 306
Query: 150 IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTS 209
+V + G + AR +F+ +P DV +WN +I+GY NG A +++ M + +
Sbjct: 307 AVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 366
Query: 210 WKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA---HSYLEKYP- 265
Q TW S++ + G +++ H L K
Sbjct: 367 ANQ--------------------------GTWVSVLPACSQAGALRQGMKLHGRLLKNGL 400
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
Y ++ T++ Y + G + A+ +F + + WN +I G + GE+ + F +
Sbjct: 401 YLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKE 460
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-----AMITMY 380
M + G PD+ TF ++L+ CS +D G+ ++ + + + M+ MY
Sbjct: 461 MLDEGVKPDHITFVTLLSACSHSGLVDEGQ----WCFEMMQTDYGITPSLKHYGCMVDMY 516
Query: 381 ARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITF 439
R G +++AL S+ + D W +++ HG + L L + +P+ + +
Sbjct: 517 GRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD--LGKIASEHLFEVEPEHVGY 574
Query: 440 VGVLS 444
+LS
Sbjct: 575 HVLLS 579
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 16/195 (8%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVI 59
R+++A +LF ++P+ ++V WN +I + +G + A+ LF +M + D T+ T++
Sbjct: 418 GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 477
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVT-----WNSMISGYVCNGLIDEALRVFHGMPLK-D 113
+ S V + F+ M+ +T + M+ Y G ++ AL+ M L+ D
Sbjct: 478 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 537
Query: 114 VVSWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVREGR---IVEARKL 167
W ++ A +DL A + E+ V ++ N G+ + E R +
Sbjct: 538 ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 597
Query: 168 FDKMPAKDVQAWNLM 182
+ W+ M
Sbjct: 598 AHGKGLRKTPGWSSM 612
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 189/630 (30%), Positives = 315/630 (50%), Gaps = 79/630 (12%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI 59
+++ A+ +F+ + +R+ V WN M+ G+ +NG M F+ M P+ D FT+ ++
Sbjct: 358 SKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIF 417
Query: 60 AGLM-----------------------------------QSDNVQGAKEVFDGMEVRDVV 84
+ +S ++ A++ F+ M++ D V
Sbjct: 418 SACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNV 477
Query: 85 TWNSMISGYVCNGLIDEALRVFHGMP----LKDVVSWNLVIGALVNCQRMDLAES---YF 137
+WN++I GYV DEA +F M L D VS ++ A N Q + +
Sbjct: 478 SWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLL 537
Query: 138 KEMGA-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
++G + + +++ V+ G ++ AR +F MP+++V + N +IAGY G + A
Sbjct: 538 VKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGY-TMGHLEEAI 596
Query: 197 DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKE 256
LFQ++ L + GL++ D A L ++
Sbjct: 597 HLFQEIQMVGLKPTEVTFAGLLDG--CDGAFML----------------------NLGRQ 632
Query: 257 AHSYLEKYPYSNIASWTNVIVGYFEMGE---VGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
H + K+ + + + V + M V S EL + + VW +I G +
Sbjct: 633 IHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQ 692
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
+ E+ L+F+ M+ PD A F SVL C+ + +L G++IH+ N
Sbjct: 693 NHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTC 752
Query: 374 NAMITMYARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
+++I MYA+CG+++ +L F +P +++ISWNS+I GLA +GYAE+ALE+F++M
Sbjct: 753 SSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSI 812
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
PD++TF+GVLSACS+AG V +GR FD M N Y L PR H C+VD+LGR+G ++EA
Sbjct: 813 IPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDHLGCMVDILGRWGFLNEAE 872
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
+N++ G + P +W LLGACR H + G+ A +++MEL+P +S Y++L+ +Y
Sbjct: 873 EFINKL---GCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSSSSYVLLSSIYA 929
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
A + +MK GVKK PG SWI+
Sbjct: 930 ESENWSGAVSLRREMKLKGVKKLPGYSWIE 959
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 166/643 (25%), Positives = 302/643 (46%), Gaps = 86/643 (13%)
Query: 5 RIQEAQNLFDKMPQR----------------------DTVTWNVMIRGYFKNGFLDNAMC 42
RIQ A NLFD+ P+ + NV++ Y K G +D A
Sbjct: 39 RIQ-AHNLFDEKPKPVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQK 97
Query: 43 LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGM---EVR-DVVTWNSMISGYVCNGL 98
F+++ ++D+F +N+V++ + + F M EVR + T+ ++S C+GL
Sbjct: 98 AFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSA--CSGL 155
Query: 99 IDEAL-RVFHGMPLKDVVSW-NLVIGALVN----CQRMDLAESYFKEMGARDVASWTIMV 152
D R H K + + G L++ C+ + A F D SWT ++
Sbjct: 156 QDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALI 215
Query: 153 NGLVREGRIVEARKLFDKMP----AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
G VR+G +EA K+FD+M A D ++ Y+ G + A LF ++ + ++
Sbjct: 216 AGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVV 275
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEK-TWNSIISVL--------IRNGLVKEAHS 259
+W +I+G + AIS+F ++ +T K T +S+ SVL + G + A +
Sbjct: 276 AWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQA 335
Query: 260 YLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
E N+ + ++ Y + ++ +A +VF + R++ +WN M+ G +N L +E
Sbjct: 336 TKEGLD-DNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEV 394
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK--IARNQFTTVSNAMI 377
++FF MK GP PD TFTS+ + C+ L L+ G Q+H IK A N F V+NA++
Sbjct: 395 MEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLF--VANALV 452
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
MYA+ G ++ A +F + IHD +SWN+II G Y ++A +F RM PD++
Sbjct: 453 DMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEV 512
Query: 438 TFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI--------- 488
+ ++SAC+ + +G+ C+ K L + + ++D+ + G++
Sbjct: 513 SLASIVSACANVQELKRGQQC-HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYS 571
Query: 489 ---------------------DEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
+EA++L EI+ G++ + + LL C + +G
Sbjct: 572 MPSRNVVSVNALIAGYTMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGR 631
Query: 528 IAGERVME--LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
+VM+ ++ V + L +Y++ R D++ +F++++
Sbjct: 632 QIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQ 674
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 143/623 (22%), Positives = 249/623 (39%), Gaps = 120/623 (19%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
R+ +A+ LF ++P + V WNVMI G+ K GF + A+ F ++ + + + + ++
Sbjct: 257 GRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVL 316
Query: 64 QS-----------------------DNV----------------QGAKEVFDGMEVRDVV 84
+ DNV AK+VF+ + R++V
Sbjct: 317 SAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIV 376
Query: 85 TWNSMISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
WN+M+ G+ NGL E + F M P D ++ + A + ++ M
Sbjct: 377 LWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVM 436
Query: 141 GARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAE 196
AS + N LV + G + EARK F+ M D +WN +I GY+ A
Sbjct: 437 IKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAF 496
Query: 197 DLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNG 252
+F++M D S +++ N + + + C +L++ G
Sbjct: 497 FMFRRMVSNGVLPDEVSLASIVSACANVQELKRG--------QQCH-------CLLVKVG 541
Query: 253 LVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
L ++ + +++I Y + G V +A VF M +R+V N +I G
Sbjct: 542 L------------DTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM 589
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK---IARNQF 369
L EE + F +++ G P TF +L C L+LGRQIH Q +K ++ ++
Sbjct: 590 GHL-EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEM 648
Query: 370 TTVSNAMITMYARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYHGYAEKALELFERMR 428
VS ++ +Y + FS + ++ W ++I G A + EKAL+ ++ MR
Sbjct: 649 VCVS--LLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMR 706
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGR-----------------------YYFDCMKNK 465
+ PD F VL AC+ + G+ Y C K
Sbjct: 707 SDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVK 766
Query: 466 YFLQ-----PRSAH---YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
LQ PR + + ++ L + G +EA+ + ++ I + +L AC
Sbjct: 767 GSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSAC 826
Query: 518 RIHNNIKVGEIAGERVMELEPNN 540
+ G +V +L NN
Sbjct: 827 SHAGRVS----EGRKVFDLMVNN 845
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 140/301 (46%), Gaps = 7/301 (2%)
Query: 274 NVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
NVIV Y + G V A K F + +DV WN ++ ++ L ++ FV M
Sbjct: 80 NVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVR 139
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
P+ TF VL+ CS L ++ GRQ+H K + +I MYA+C ++ A L
Sbjct: 140 PNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLV 199
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F D +SW ++I G G+ +A+++F+RM+ PD IT V V++A G +
Sbjct: 200 FDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRL 259
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGA 512
R F + N P + ++ + G +EA++ E++ G++ + + G+
Sbjct: 260 ADARKLFTQIPN-----PNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGS 314
Query: 513 LLGACRIHNNIKVGE-IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
+L A + + G + + E +N V L MY C + + AK++F + E
Sbjct: 315 VLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERN 374
Query: 572 V 572
+
Sbjct: 375 I 375
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 177/386 (45%), Gaps = 34/386 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
++ ++EA+ F+ M D V+WN +I GY + + D A +F +M + +A
Sbjct: 457 KSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLAS 516
Query: 62 LMQS-DNVQGAKE--------VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++ + NVQ K V G++ +S+I YV G++ A VF+ MP +
Sbjct: 517 IVSACANVQELKRGQQCHCLLVKVGLDT-STCAGSSLIDMYVKCGVVLAARDVFYSMPSR 575
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGL---------VREGRIVE 163
+VVS N +I A ++ A F+E+ + + GL + GR +
Sbjct: 576 NVVSVNALI-AGYTMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIH 634
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM-HDRDLTSWKQLINGLVNSRR 222
+ + + ++ Y+++ +E LF ++ + + L W LI+G
Sbjct: 635 GQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNH 694
Query: 223 IDAAISYFKQM-PETCEKTWNSIISVL--------IRNGLVKEAHSYLEKYPYS-NIASW 272
+ A+ +++ M + + SVL ++NG +E HS + ++ + +
Sbjct: 695 HEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNG--QEIHSLIFHTGFNMDEVTC 752
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
+++I Y + G+V +++VF M R +V WN MI GL +N EE L+ F QM++
Sbjct: 753 SSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSI 812
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQI 357
PD TF VL+ CS + GR++
Sbjct: 813 IPDEVTFLGVLSACSHAGRVSEGRKV 838
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 8/227 (3%)
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSI 407
L L + IH++++KI + N ++ +Y +CGN+ A FS + D+ +WNS+
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 408 ICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYF 467
+ HG ++ F M + +P++ TF VLSACS V+ GR C K
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGR-QVHCGVFKTG 172
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
RS ++D+ + + +A + + + + W AL+ A + + +
Sbjct: 173 FGFRSFCQGGLIDMYAKCRYLRDARLVFD----GALNLDTVSWTALI-AGYVRDGFPMEA 227
Query: 528 I-AGERVMELEPNNSGVYLI-LTEMYLSCGRREDAKRIFAQMKENGV 572
+ +R+ + + L+ + Y++ GR DA+++F Q+ V
Sbjct: 228 VKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNV 274
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 174/538 (32%), Positives = 268/538 (49%), Gaps = 68/538 (12%)
Query: 97 GLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG----ARDVASWTIMV 152
G + A R+F+ + + + +NLVI A A F+++ + D ++ +
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139
Query: 153 NGLVREGRIVEARKLFDKMPAK----DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
+ G + E K++ + D N ++ Y + G V +F++M RD+
Sbjct: 140 KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVV 199
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
SW LI+G V RR + A+ F+Q+ P
Sbjct: 200 SWNVLISGYVKCRRYEDAVDVFRQI---------------------------FNDMPIKT 232
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ WT+++ GY G++ A ++FE RDV +W MI G + + ++ + F +M+
Sbjct: 233 VICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQI 292
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
SPD T ++LT V A+I MYA+CG I+
Sbjct: 293 KRVSPDRFTLVALLTD-------------------------AVVGTALIEMYAKCGFIEK 327
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
+L F+ + D SW SIICGLA +G KALELF M T KPDDITF+GVLSACS+
Sbjct: 328 SLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSH 387
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
GLV++GR +F M Y ++P+ HY C++DLLGR G +DEA L+ + EV
Sbjct: 388 GGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVP 447
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
++GALL ACR H N+++GE +R++ +E +S V+ +L +Y S R ED ++ +MK
Sbjct: 448 LYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMK 507
Query: 569 ENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL--------RYLLNLLHTEIEREI 618
+ GVKK PGCS +++N H FL GD+SHP+ + + LL L E+E EI
Sbjct: 508 DLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAKPLLGLDENEMEGEI 565
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 194/438 (44%), Gaps = 69/438 (15%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAGLMQ 64
A+ +F+ + +N++I+ + KNG A+ LF Q+ E D FTY V +
Sbjct: 85 AERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGC 144
Query: 65 SDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
V+ ++V+ G+E D NS++ Y G + +VF MP +DVVSWN+
Sbjct: 145 LGEVREGEKVYGFVVKSGLEF-DTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNV 203
Query: 120 VIGALVNCQR----MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
+I V C+R +D+ F +M + V WT MV+G V G++ EAR+LF++ P +D
Sbjct: 204 LISGYVKCRRYEDAVDVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRD 263
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
V W MI GY+ A LF++M + ++ + + L+ DA +
Sbjct: 264 VVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLT----DAVVG------- 312
Query: 236 TCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
++I + + G ++++ + ASWT++I G
Sbjct: 313 ------TALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICG----------------- 349
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
L N + L+ F +M ++G PD+ TF VL+ CS ++ GR
Sbjct: 350 --------------LAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGR 395
Query: 356 QIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSA--LLEFSSVPIHDIIS--WNSIIC 409
+ H +++ + + +I + R G + A L+E S +++I + +++
Sbjct: 396 K-HFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLS 454
Query: 410 GLAYHGYAEKALELFERM 427
HG E + +R+
Sbjct: 455 ACRTHGNVEMGERVAKRL 472
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 44/285 (15%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAM----CLFNQMPERDMFTYNTVI 59
R+Q + +F++MPQRD V+WNV+I GY K ++A+ +FN MP + + + +++
Sbjct: 181 GRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRQIFNDMPIKTVICWTSMV 240
Query: 60 AGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK------- 112
+G + + A+E+F+ VRDVV W +MI+GYV D+A+ +F M +K
Sbjct: 241 SGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRF 300
Query: 113 -------DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEAR 165
D V +I C ++ + F + +D ASWT ++ GL G+ +A
Sbjct: 301 TLVALLTDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKAL 360
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCV--GVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
+LF +M V+ ++ G L + C G+ E+ + H R +T+ Q+
Sbjct: 361 ELFAEMVQTGVKPDDITFIGVL-SACSHGGLVEE--GRKHFRSMTAVYQI---------- 407
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSN 268
E + + +I +L R G + EA +EK P N
Sbjct: 408 -----------EPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVN 441
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 128/302 (42%), Gaps = 34/302 (11%)
Query: 282 MGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSV 341
+G + A ++F + + ++N++I +N + + F Q++E G SPDN T+ V
Sbjct: 79 IGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFV 138
Query: 342 LTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDI 401
L + G +++ +K T V N+++ MYA G +Q+ F +P D+
Sbjct: 139 FKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDV 198
Query: 402 ISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDC 461
+SWN +I G E A+++F ++ I + ++S G +D+ R F+
Sbjct: 199 VSWNVLISGYVKCRRYEDAVDVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFER 258
Query: 462 MKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
+ + +T +++ +F D+A+ L E++ + ALL
Sbjct: 259 SPVRDVVL-----WTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALL------- 306
Query: 522 NIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWI 581
++ V L EMY CG E + IF NG+K++ SW
Sbjct: 307 -----------------TDAVVGTALIEMYAKCGFIEKSLEIF-----NGLKEKDTASWT 344
Query: 582 QI 583
I
Sbjct: 345 SI 346
>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
Length = 577
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 161/527 (30%), Positives = 278/527 (52%), Gaps = 26/527 (4%)
Query: 93 YVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR-----DVAS 147
Y NG++ +A ++F MP++D VSWN++I + D+ +FK+M + D A+
Sbjct: 2 YAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQAT 61
Query: 148 WTIMVNGLVRE-----GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
T +++ R ++V + + +++ N +I Y G +F +M
Sbjct: 62 LTTILSACDRPELGFVNKMVHCLAVLNGF-QREISVGNALITSYFKCGFSSSGMQVFDEM 120
Query: 203 HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC--EKTWNSIISVLIRNGLVK----- 255
+R++ +W +I+GLV S ++ F +M + + S++ +GL
Sbjct: 121 LERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGC 180
Query: 256 EAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+ H + K S+ + ++ Y + G +G +++FE D +++ G +N
Sbjct: 181 QIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQNG 240
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
EE ++FFV+M E+G D+ ++VL + +L LG+QIH+ IK + V N
Sbjct: 241 FEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGN 300
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
+I MY++CG+++ + FS +P + +SWNS+I A HG +AL+L++ MRL +P
Sbjct: 301 GLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKGVEP 360
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
D+TF+ +L ACS+ GLV++G + M + L PR HY CVVD+LGR GL++EA
Sbjct: 361 TDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAGLLNEAKTF 420
Query: 495 LNEIRADGIEVSP--TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
+ +G+ + P VW ALLGAC IH + ++G+ A E ++ P Y++L +Y
Sbjct: 421 I-----EGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPYILLANIYS 475
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPK 599
S GR ++ + +MKE V KE G SWI+I + H F+ D HP+
Sbjct: 476 SKGRWKERAKTIKRMKEMCVAKETGISWIEIENNLHSFVVEDKMHPQ 522
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 197/446 (44%), Gaps = 31/446 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-----RDMFTYN 56
+N + +A LFD+MP RDTV+WN+MI G+ K+G D F QM D T
Sbjct: 4 KNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQATLT 63
Query: 57 TVIAGLMQSD-----NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL 111
T+++ + + + V +G + R++ N++I+ Y G ++VF M
Sbjct: 64 TILSACDRPELGFVNKMVHCLAVLNGFQ-REISVGNALITSYFKCGFSSSGMQVFDEMLE 122
Query: 112 KDVVSWNLVIGALVNCQRMDLAESYFKEM--GARDVASWTIM-----VNGL--VREGRIV 162
++V++W +I LV + + F EM G + S T + +GL +REG +
Sbjct: 123 RNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGCQI 182
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
R ++ D + ++ Y G +G +F+ D S ++ G +
Sbjct: 183 HGR-VWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQNGF 241
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLI-------RNGLVKEAHSYLEKYPY-SNIASWTN 274
+ A+ +F +M E + ++++S ++ GL ++ HS + K + SN
Sbjct: 242 EEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGNG 301
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+I Y + G++ + KVF M + WN MI + G L+ + +M+ G P
Sbjct: 302 LINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKGVEPT 361
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA-MITMYARCGNIQSALLEF 393
+ TF S+L CS + ++ G + ++ + A ++ M R G + A
Sbjct: 362 DVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAGLLNEAKTFI 421
Query: 394 SSVPIH-DIISWNSIICGLAYHGYAE 418
+PI D++ W +++ HG E
Sbjct: 422 EGLPIKPDVLVWQALLGACGIHGDPE 447
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 32/218 (14%)
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR-LTDFKPDDI 437
MYA+ G + A F +P+ D +SWN +I G G + F++M+ L ++ D
Sbjct: 1 MYAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQA 60
Query: 438 TFVGVLSACSYA--GLVDQGRY---------------------YFDCMKNKY-------F 467
T +LSAC G V++ + YF C +
Sbjct: 61 TLTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEM 120
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE 527
L+ +T ++ L + L +++ L E+ +E + + + L AC ++ G
Sbjct: 121 LERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGC 180
Query: 528 IAGERVMELE-PNNSGVYLILTEMYLSCGRREDAKRIF 564
RV +L ++ V L +MY CG D +IF
Sbjct: 181 QIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIF 218
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/474 (32%), Positives = 265/474 (55%), Gaps = 31/474 (6%)
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL-VNSR 221
+A K+FD+MP +DV +W ++ GY G A LF +M ++ G+ N+
Sbjct: 196 DAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRM---------VVVGGMRPNAV 246
Query: 222 RIDAAISYFKQMP-----------------ETCEKTWNSIISVLIRNGLVKEAHSYLEKY 264
+ AA+S QM N+++ + + G V+ A +
Sbjct: 247 TLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGM 306
Query: 265 PYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
++ SWT+++ Y + G++ SA ++F+ M R+V W+ MI + + EE + F
Sbjct: 307 EVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFR 366
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT-VSNAMITMYARC 383
+M +G P +AT SVL+ C+ L LDLGR I+ I + T + NA+I M+A+C
Sbjct: 367 EMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKC 426
Query: 384 GNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
G++ A F + +++SWN++I A HG +E+A+ LFE+++ + PD ITF+G+L
Sbjct: 427 GDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLL 486
Query: 444 SACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
++CS++GLV +GR YF M+ Y ++PR HY C++DLLG+ GL++EA + R +
Sbjct: 487 ASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEV---ARGMPM 543
Query: 504 EVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRI 563
E WGALL ACR+H N+++G ++++EL+P++SG+Y++++++Y S + + K +
Sbjct: 544 EADEAGWGALLNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKML 603
Query: 564 FAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
M++ GVKK PGCS I++ H FL D SH + L ++ +++E
Sbjct: 604 RMTMRDRGVKKNPGCSSIEVEGKFHDFLVADVSHACSEEIYSALKNIYFHLKQE 657
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 179/401 (44%), Gaps = 22/401 (5%)
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
N ++ ++ A +VFD M RDVV+W +++ GY GL DEA R+F M + +
Sbjct: 182 NALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGM 241
Query: 116 SWNLV--IGALVNCQRMDL------AESYFKEMG-ARDVASWTIMVNGLVREGRIVEARK 166
N V + A+ +M L Y E G AR V +V+ + G + AR+
Sbjct: 242 RPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYARE 301
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
+FD M KDV +W M+ Y G + AE LF+ M R++ SW +I + + A
Sbjct: 302 VFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEA 361
Query: 227 ISYFKQM----PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWT----NVIVG 278
+ F++M + + T S++S + G + E Y SN T N ++
Sbjct: 362 VWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALID 421
Query: 279 YF-EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNAT 337
F + G+VG A K+F+ M R+V WN MI + EE ++ F Q+K PD T
Sbjct: 422 MFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQIT 481
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNA-MITMYARCGNIQSALLEFSSV 396
F +L CS + GR+ + R + A MI + + G ++ A +
Sbjct: 482 FLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGM 541
Query: 397 PIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
P+ D W +++ HG E + + +L + P D
Sbjct: 542 PMEADEAGWGALLNACRMHGNVEIGACVAD--KLVELDPSD 580
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 152/361 (42%), Gaps = 90/361 (24%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVI------ 59
+ +A +FD+MP+RD V+W ++ GY + G D A LF +M N V
Sbjct: 194 LDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVS 253
Query: 60 --------------------AGLMQSDN--------------VQGAKEVFDGMEVRDVVT 85
G+ +S N V+ A+EVFDGMEV+DV +
Sbjct: 254 AIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYS 313
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM----- 140
W SM++ Y G ++ A ++F MP ++VVSW+ +I A + + A F+EM
Sbjct: 314 WTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGV 373
Query: 141 -----------------GARDVASW------------------TIMVNGLVREGRIVEAR 165
G D+ W +++ + G + EA
Sbjct: 374 DPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEAS 433
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
KLFD+M ++V +WN MI + +G A LF+++ ++ + GL+ S
Sbjct: 434 KLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSG 493
Query: 226 AIS----YFKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNV 275
+S YFK+M E + + +I +L + GL++EA P ++ A W +
Sbjct: 494 LVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGAL 553
Query: 276 I 276
+
Sbjct: 554 L 554
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 118/269 (43%), Gaps = 19/269 (7%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++ A+ +FD M +D +W M+ Y K G L++A LF MP R++ +++ +IA Q
Sbjct: 296 VRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQL 355
Query: 66 DNVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW---- 117
+ + A +F M V T S++S G +D ++ + + +
Sbjct: 356 NQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNL 415
Query: 118 -NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
N +I C + A F EM R+V SW M+ G+ EA +LF+++ +++
Sbjct: 416 GNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENI 475
Query: 177 QAWNLMIAGYL----DNGCVGVAEDLFQKMH-----DRDLTSWKQLINGLVNSRRIDAAI 227
+ G L +G V F++M + + + +I+ L ++ A
Sbjct: 476 VPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAF 535
Query: 228 SYFKQMP-ETCEKTWNSIISVLIRNGLVK 255
+ MP E E W ++++ +G V+
Sbjct: 536 EVARGMPMEADEAGWGALLNACRMHGNVE 564
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 24/228 (10%)
Query: 354 GRQIHAQAIKIA-RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
G IH A+K + V NA++ YA ++ A F +P D++SW +++ G A
Sbjct: 161 GEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYA 220
Query: 413 YHGYAEKALELFERMRLT-DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ-- 469
G A++A LF RM + +P+ +T V +SA GL+ F M +KY +
Sbjct: 221 RAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLL-----AFGIMLHKYVTEGG 275
Query: 470 -PRSAHY-TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV-WGALLGACRIHNNIKVG 526
RS + +VD+ G+ G + A + DG+EV W +++ A K G
Sbjct: 276 VARSVNLDNALVDMFGKCGCVRYAREVF-----DGMEVKDVYSWTSMVNA-----YAKCG 325
Query: 527 EI-AGERVMELEPNNSGV-YLILTEMYLSCGRREDAKRIFAQMKENGV 572
++ + E++ + P + V + + Y + E+A +F +M GV
Sbjct: 326 DLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGV 373
>gi|345505204|gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionema cordifolium]
Length = 587
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 165/526 (31%), Positives = 283/526 (53%), Gaps = 17/526 (3%)
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV--NCQRMDLAESY 136
EV D WN++I + +G+ + ++ + L++ VS + +LV C R+ +
Sbjct: 60 EVEDPFLWNAVIKSH-SHGVDPKRALIWFCLMLENGVSVDKFSLSLVLKACSRLGFVQEG 118
Query: 137 FKEMG-ARDVASWT------IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
+ G R W+ ++ ++ G + AR++FD+MP +D ++N MI GY+
Sbjct: 119 MQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKC 178
Query: 190 GCVGVAEDLFQKMHD--RDLTSWKQLINGLVN-SRRIDAAISYFKQMPETCEKTWNSIIS 246
G +G A +LF M ++L SW +I+G S ++ A F +MPE +WNS+I
Sbjct: 179 GLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLID 238
Query: 247 VLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVM 306
+++G +++A P ++ +W +I GY ++G V A +F+ M RDV +N M
Sbjct: 239 GYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSM 298
Query: 307 IFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
+ G +N E L+ F M K+S SPD T VL+ + L L ++ ++ +
Sbjct: 299 MAGYVQNKYHMEALEIFNNMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMNKYIVEKS 358
Query: 366 RNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFE 425
+ A+I M+++CG+IQ A+ F + I WN++I GLA HG+ E A ++
Sbjct: 359 FPLGGKLGVALIDMHSKCGSIQQAISVFEGIKNKSIDHWNAMIGGLAIHGHGELAFDMLM 418
Query: 426 RMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRF 485
++ KPDDITF+GVL+ACS++GLV +G F+ M+ K+ ++PR HY C+VD+L R
Sbjct: 419 QIERCSIKPDDITFIGVLNACSHSGLVKEGLLSFELMRRKHKIEPRLQHYGCIVDILSRS 478
Query: 486 GLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL 545
G I+ A +L+ ++ +E + +W L ACR ++GE+ + ++ N Y+
Sbjct: 479 GSIELAKHLIEDM---PMEPNDVIWRTFLIACRNRKEFEIGELVAKHLILQAGYNPSSYV 535
Query: 546 ILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
+L+ MY S G +D +R+ MK+ + K PGCSWI+++ H F
Sbjct: 536 LLSNMYASLGMWKDVRRVRMMMKQRKLHKIPGCSWIELDGNVHEFF 581
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 202/414 (48%), Gaps = 32/414 (7%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGLMQSDNVQGAKEVF 75
D + +++++ + GF+ M + + + D+F N +I ++ + A+++F
Sbjct: 98 DKFSLSLVLKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIF 157
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWNLVI-GALVNCQRMDL 132
D M RD V++NSMI GYV GLI A +F MP +K+++SWN +I G +++
Sbjct: 158 DRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNI 217
Query: 133 AESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCV 192
A F EM +D+ SW +++G V+ GR+ +A+ LF MP +DV W MI GY G V
Sbjct: 218 ASKLFAEMPEKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFV 277
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSIISV 247
A+ LF +M RD+ ++ ++ G V ++ A+ F M + E T ++S
Sbjct: 278 HKAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFNNMEKDSHLSPDETTLVIVLSA 337
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM----GEVGSAIKVFELMTTRDVTVW 303
+ + G + +A S + + + V +M G + AI VFE + + + W
Sbjct: 338 IAQLGRLSKAMSMNKYIVEKSFPLGGKLGVALIDMHSKCGSIQQAISVFEGIKNKSIDHW 397
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLGRQ 356
N MI GL + GE +Q++ PD+ TF VL CS L + +L R+
Sbjct: 398 NAMIGGLAIHGHGELAFDMLMQIERCSIKPDDITFIGVLNACSHSGLVKEGLLSFELMRR 457
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSII 408
H ++ ++ + +R G+I+ A L+E + +D+I W + +
Sbjct: 458 KHKIEPRLQH------YGCIVDILSRSGSIELAKHLIEDMPMEPNDVI-WRTFL 504
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 194/397 (48%), Gaps = 25/397 (6%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTVIAGLMQ-S 65
A+ +FD+MPQRD+V++N MI GY K G + +A LF+ MP+ +++ ++N++I+G Q S
Sbjct: 153 ARQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTS 212
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D V A ++F M +D+++WNS+I GYV +G +++A +F+ MP +DVV+W +I
Sbjct: 213 DGVNIASKLFAEMPEKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYA 272
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP-----AKDVQAWN 180
+ A++ F +M RDV ++ M+ G V+ +EA ++F+ M + D
Sbjct: 273 KLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFNNMEKDSHLSPDETTLV 332
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR----RIDAAISYFKQMPET 236
++++ G + A + + + ++ +L L++ I AIS F+ +
Sbjct: 333 IVLSAIAQLGRLSKAMSMNKYIVEKSFPLGGKLGVALIDMHSKCGSIQQAISVFEGIKNK 392
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYFEMGEVGSAIKVF 292
WN++I L +G + A L + +I ++ V+ G V + F
Sbjct: 393 SIDHWNAMIGGLAIHGHGELAFDMLMQIERCSIKPDDITFIGVLNACSHSGLVKEGLLSF 452
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEG-LKFFVQMKESGP-SPDNATFTSVLTICSDLPT 350
ELM + + +G + L G ++ + E P P++ + + L C +
Sbjct: 453 ELMRRKHKIEPRLQHYGCIVDILSRSGSIELAKHLIEDMPMEPNDVIWRTFLIACRNRKE 512
Query: 351 LDLGRQIHAQAIKIA---RNQFTTVSNAMITMYARCG 384
++G + I A + + +SN MYA G
Sbjct: 513 FEIGELVAKHLILQAGYNPSSYVLLSN----MYASLG 545
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 175/566 (30%), Positives = 303/566 (53%), Gaps = 40/566 (7%)
Query: 43 LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEA 102
LF+Q+P+ + F +N +I G S + ++ ++ + M VC+G+
Sbjct: 90 LFDQIPQPNKFMFNHLIKGYSNSSD-----------PIKSLLLYRRM----VCDGI---- 130
Query: 103 LRVFHGMPLKDVVSWNLVIGALVNCQRMDL---AESYFKEMGARDVASWTIMVNGLVREG 159
+P + + + L A +C + + A+S+ MG+ I+ N V G
Sbjct: 131 ------LPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAIL-NIYVACG 183
Query: 160 RIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGL-- 217
I AR++FD + + + +WN MI GY G A +F++M + L + GL
Sbjct: 184 LITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLS 243
Query: 218 VNSRRIDAAISYFKQMP------ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
V+++ + + F + E N+++ + + G +K A S ++ ++ S
Sbjct: 244 VSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVS 303
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGP 331
WT +I Y G + A++ F M ++V WN +I+ + L E + F +M +SG
Sbjct: 304 WTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGV 363
Query: 332 SPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALL 391
++ T ++L+ CS + L LG+Q H+ T+ NA+I MYA+CG +Q+A+
Sbjct: 364 MANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMD 423
Query: 392 EFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGL 451
F +P + +SWN II LA HGY ++A+E+FE+M+ + PD+ITF G+LSACS++GL
Sbjct: 424 VFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGL 483
Query: 452 VDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWG 511
VD G++YF+ M + + P HY C+VDLLGR GL+ EA++L+ ++ ++ VW
Sbjct: 484 VDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMP---VKPDVVVWS 540
Query: 512 ALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENG 571
ALLGACR + N+ +G+ ++++EL NSG+Y++L+ MY R +D K I+ + +NG
Sbjct: 541 ALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNG 600
Query: 572 VKKEPGCSWIQINDGGHVFLSGDSSH 597
+KK S+I+I+ + F+ D H
Sbjct: 601 IKKCRAISFIEIDGCCYQFMVDDKRH 626
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 176/391 (45%), Gaps = 38/391 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
I A+ +FD + +R V+WN MI GY K G + A+ +F +M E D+FT + G
Sbjct: 185 ITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFT----LVG 240
Query: 62 LMQSDNVQGAKE---------VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
L+ G + V G+E+ +VT N+++ Y G + A VF M K
Sbjct: 241 LLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVT-NALMDMYAKCGNLKCAKSVFDQMLDK 299
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
DVVSW +I A N +D A +F +M ++V SW ++ V+EG EA LF +M
Sbjct: 300 DVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMC 359
Query: 173 AKDVQAWNLMIAGYLDN----GCVGVAEDLFQKMHDRDLTSWKQLINGLVN----SRRID 224
V A + + L + G + + + + D ++T L N +++ +
Sbjct: 360 DSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQ 419
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYF 280
A+ F MPE +WN II L +G KEA EK S + ++T ++
Sbjct: 420 TAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACS 479
Query: 281 EMGEVGSAIKVFELMT-----TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
G V + FE+M + DV + M+ LG L E + +M PD
Sbjct: 480 HSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMP---VKPDV 536
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
++++L C L +G+QI Q +++ R
Sbjct: 537 VVWSALLGACRTYGNLAIGKQIMKQLLELGR 567
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 159/404 (39%), Gaps = 63/404 (15%)
Query: 230 FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVIVGYFEMGEVGSA 288
+++ +T + +I I +K H+ + + + + + ++ ++ ++ A
Sbjct: 28 LQELKSPTHQTLHYLIDQCISLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYA 87
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
K+F+ + + ++N +I G + + L + +M G P+ T VL C+
Sbjct: 88 HKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAK 147
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
LG +HAQ+ K+ V NA++ +Y CG I SA F + ++SWNS+I
Sbjct: 148 SCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMI 207
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY---------- 458
G + G +E+A+ +F M+ +PD T VG+LS + G D GR+
Sbjct: 208 NGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIE 267
Query: 459 ------------------FDCMKNKY--FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
C K+ + L +TC+++ GLID A+ N++
Sbjct: 268 IDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQM 327
Query: 499 RA-------------------------------DGIEVSPTVWGALLGACRIHNNIKVGE 527
G+ + T A+L +C ++ +G+
Sbjct: 328 PGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGK 387
Query: 528 IAGERVMELEPNNSGVYL-ILTEMYLSCGRREDAKRIFAQMKEN 570
A + + S + +MY CG + A +F M E
Sbjct: 388 QAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEK 431
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 141/327 (43%), Gaps = 69/327 (21%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ ++ A+++FD+M +D V+W MI Y +G +D A+ FNQMP ++
Sbjct: 282 KCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKN---------- 331
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI 121
VV+WNS+I +V GL EA+ +F+ M V++ + +
Sbjct: 332 ---------------------VVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTL 370
Query: 122 GALV-NCQRM-DL-----AESY-FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
A++ +C M DL A SY F +++ + G + A +F MP
Sbjct: 371 VAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPE 430
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAISY 229
K+ +WN++I +G A ++F+KM D ++ L++ +S +D Y
Sbjct: 431 KNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHY 490
Query: 230 FKQM-------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYP----------------- 265
F+ M P+ + + ++ +L R GL+ EA S ++K P
Sbjct: 491 FEIMNLTFGISPDV--EHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRT 548
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVF 292
Y N+A ++ E+G S + V
Sbjct: 549 YGNLAIGKQIMKQLLELGRYNSGLYVL 575
>gi|357464703|ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491681|gb|AES72884.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 178/610 (29%), Positives = 297/610 (48%), Gaps = 62/610 (10%)
Query: 55 YNTVIAGLMQSDNVQGAKE---------VFDGMEVRDVVTWNSMISGYVCNGLIDEALRV 105
+NT IA + D GAK +F+ V+ + + + + + +
Sbjct: 9 FNTPIAHGLTGDTQIGAKSNALKFINYSIFESCPVKKPRQLDPLTKPVLFFLVGERNTVM 68
Query: 106 FHGMPLKDVV-SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGR 160
FH + ++ +I V+ + + ++ ++ + T + NGL+ + G
Sbjct: 69 FHTNDFSSTIEKFSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGC 128
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
K FD +P K + WN +++ Y G A LF +M R+L S+ LI+GL
Sbjct: 129 KESIHKAFDDLPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRH 188
Query: 221 RRIDAAISYFKQMPE-------------------TCEKT--W------------------ 241
A+ +F++M +C T W
Sbjct: 189 EFHKEAVKFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLI 248
Query: 242 --NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
N++I + G + + SWT+++V Y + A KVF M +
Sbjct: 249 LNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKY 308
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
W +I G +N E L+ F QM + G P TF SVL C+ + G+Q+H
Sbjct: 309 TVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHC 368
Query: 360 QAIK--IARNQFTT-VSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYH 414
Q I+ + N F V NA++ MYA+CG+++SA L E + + D++SWN++I G A +
Sbjct: 369 QIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMM-IHVKDVVSWNTLITGFAQN 427
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
G E +L +F+RM ++ +P+ +TF+GVLSAC++AGLV+ G D M+ +Y ++P+S H
Sbjct: 428 GRGEDSLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNH 487
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM 534
Y ++DLLGR ++EAM L+ ++ + I +WGA+LG CR+H N+++ A E +
Sbjct: 488 YALLIDLLGRKNRLEEAMCLIEKV-PNEISNHIAMWGAVLGGCRVHGNLELARKAAEALF 546
Query: 535 ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGD 594
LEP N+G Y++L+ +Y + GR D RI MKE G+KKEP S I++ + H F++ D
Sbjct: 547 ALEPENTGRYVMLSNIYAASGRWSDTNRIRNVMKERGLKKEPAFSRIELKESRHEFVAKD 606
Query: 595 SSHPKFHRLR 604
HP+ +R
Sbjct: 607 KFHPQIGEIR 616
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 206/439 (46%), Gaps = 53/439 (12%)
Query: 13 FDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAK 72
FD +P + T TWN ++ Y K G + A LF++MP+R++ +YN++I+GL + + + A
Sbjct: 136 FDDLPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAV 195
Query: 73 EVFDGME------VRDVVTWNSMISGYVCNGLIDEALRVFHGMPL-----KDVVSWNLVI 121
+ F M+ + D T S++S C + + LR HG+ +++ N +I
Sbjct: 196 KFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTV-KWLRQVHGVATIVGFRTNLILNNALI 254
Query: 122 GALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNL 181
A C + + F+ M +D SWT MV R RI +A K+F++MP K +W
Sbjct: 255 DAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAA 314
Query: 182 MIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE--- 238
+I+G++ NG A ++F +M + Q ++++ +A I KQ+ C+
Sbjct: 315 LISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQV--HCQIIR 372
Query: 239 -KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMT- 296
++ +++ +V + N L+ Y + G++ SA +FE+M
Sbjct: 373 GRSSDNLFNVYVFNALMDM----------------------YAKCGDMKSAENLFEMMIH 410
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
+DV WN +I G +N GE+ L F +M ES P++ TF VL+ C+ ++ G +
Sbjct: 411 VKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLE 470
Query: 357 I-----HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVP---IHDIISWNSII 408
+ +K N + +I + R ++ A+ VP + I W +++
Sbjct: 471 LLDSMERRYGVKPKSNHYAL----LIDLLGRKNRLEEAMCLIEKVPNEISNHIAMWGAVL 526
Query: 409 CGLAYHGYAEKALELFERM 427
G HG E A + E +
Sbjct: 527 GGCRVHGNLELARKAAEAL 545
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 23/245 (9%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGA 71
LF M ++D V+W M+ Y + +D+A +FN+MP + ++ +I+G +++ A
Sbjct: 269 LFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEA 328
Query: 72 KEVFDGMEVRDVV----TWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL----VIGA 123
EVF M V+ T+ S++ LI +V H ++ S NL V A
Sbjct: 329 LEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQV-HCQIIRGRSSDNLFNVYVFNA 387
Query: 124 LVN----CQRMDLAESYFKEM-GARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
L++ C M AE+ F+ M +DV SW ++ G + GR ++ +FD+M +++
Sbjct: 388 LMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEP 447
Query: 179 WNLMIAGYLD----NGCVGVAEDLFQKMHDR-----DLTSWKQLINGLVNSRRIDAAISY 229
++ G L G V +L M R + LI+ L R++ A+
Sbjct: 448 NHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEAMCL 507
Query: 230 FKQMP 234
+++P
Sbjct: 508 IEKVP 512
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 118/249 (47%), Gaps = 55/249 (22%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----------- 50
R +RI +A +F++MP + TV+W +I G+ KNG A+ +F+QM +
Sbjct: 290 RASRIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVS 349
Query: 51 -------------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGM- 78
+++ +N ++ + +++ A+ +F+ M
Sbjct: 350 VLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMI 409
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV-IGALVNCQR-------M 130
V+DVV+WN++I+G+ NG +++L VF M ++ ++ +G L C +
Sbjct: 410 HVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGL 469
Query: 131 DLAESYFKEMGARDVAS-WTIMVNGLVREGRIVEARKLFDKMP---AKDVQAWNLMIAGY 186
+L +S + G + ++ + ++++ L R+ R+ EA L +K+P + + W ++ G
Sbjct: 470 ELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEAMCLIEKVPNEISNHIAMWGAVLGGC 529
Query: 187 LDNGCVGVA 195
+G + +A
Sbjct: 530 RVHGNLELA 538
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 185/593 (31%), Positives = 305/593 (51%), Gaps = 48/593 (8%)
Query: 32 FKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMIS 91
K G+ D+ +C+ + DMFT GL ++Q A+ VFD M+ +++VTW MI+
Sbjct: 172 LKTGYFDSHVCVGCALI--DMFTK----GGL----DIQSARMVFDKMQHKNLVTWTLMIT 221
Query: 92 GYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIM 151
Y GL+D+A+ +F + + + + +L++ E F +G + + SW I
Sbjct: 222 RYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSA----CVELEFFSLG-KQLHSWVI- 275
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
R G A DV ++ Y + V + +F M ++ SW
Sbjct: 276 -----RSGL------------ASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWT 318
Query: 212 QLINGLVNSRRIDAAISYFKQM-----PETCEKTWNSIISV---LIRNGLVKEAHSYLEK 263
LI+G V SR+ AI F M C T++S++ L G+ K+ H K
Sbjct: 319 ALISGYVQSRQEQEAIKLFCNMLHGHVTPNCF-TFSSVLKACASLPDFGIGKQLHGQTIK 377
Query: 264 YPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKF 322
S I N ++ Y G + A K F ++ +++ +N + +E
Sbjct: 378 LGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFNH 437
Query: 323 FVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYAR 382
V+ G SP T+ +L+ + + T+ G QIHA +K ++NA+I+MY++
Sbjct: 438 EVEHTGVGASP--FTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSK 495
Query: 383 CGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGV 442
CGN ++AL F+ + ++I+W SII G A HG+A KALELF M KP+++T++ V
Sbjct: 496 CGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAV 555
Query: 443 LSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADG 502
LSACS+ GL+D+ +F+ M + + PR HY C+VDLLGR GL+ EA+ +N + D
Sbjct: 556 LSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDA 615
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKR 562
VW LG+CR+H N K+GE A ++++E EP++ Y++L+ +Y S GR +D
Sbjct: 616 ---DALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAA 672
Query: 563 IFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+ MK+ + KE G SWI++++ H F GD+SHP+ ++ L+ L +I+
Sbjct: 673 LRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIK 725
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 219/530 (41%), Gaps = 64/530 (12%)
Query: 114 VVSWNLVIGALVNCQRMDLA-ESYFKEMGARDVASWT------IMVNGLVREGRI----V 162
+VS +L + + + Q DL ES K + D+ + + +++ +R G + +
Sbjct: 1 MVSLSLCLPSSIYLQAKDLKFESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKL 60
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKM--HDRDLTSWKQLINGLVNS 220
KL D D N +I Y G A +F+ M H RDL SW +I+ N+
Sbjct: 61 LHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANN 120
Query: 221 RRIDAAISYFKQMPETC-------EKTWNSII-----SVLIRNGLVKEAHSYLEKYPYSN 268
A+ F M + E + +++ + GL A Y S+
Sbjct: 121 SMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSH 180
Query: 269 IASWTNVIVGYFEMG-EVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
+ +I + + G ++ SA VF+ M +++ W +MI + L ++ + F ++
Sbjct: 181 VCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLL 240
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
S +PD T TS+L+ C +L LG+Q+H+ I+ V ++ MYA+ ++
Sbjct: 241 VSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVE 300
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
++ F+++ H+++SW ++I G ++A++LF M P+ TF VL AC+
Sbjct: 301 NSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACA 360
Query: 448 -----------YAGLVDQGRYYFDCMKNKYF-LQPRSAHYTC---VVDLLGRFGLI---- 488
+ + G +C+ N + RS C ++L LI
Sbjct: 361 SLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNT 420
Query: 489 -----------DEAMNLLNEIRADGIEVSPTVWGALL-GACRIHNNIKVGEIAGERVMEL 536
DE+ N +E+ G+ SP + LL GA I +K +I V
Sbjct: 421 AADANAKALDSDESFN--HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSG 478
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
N + L MY CG +E A ++F M V +W I G
Sbjct: 479 FGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNV-----ITWTSIISG 523
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 173/395 (43%), Gaps = 74/395 (18%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER--------- 50
IQ A+ +FDKM ++ VTW +MI Y + G LD+A+ LF ++ P++
Sbjct: 198 IQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSA 257
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
D+F T++ +S V+ ++++F+ M +V++W
Sbjct: 258 CVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSW 317
Query: 87 NSMISGYVCNGLIDEALRVF----HGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
++ISGYV + EA+++F HG + +++ V+ A + + + +
Sbjct: 318 TALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIK 377
Query: 143 RDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+++ + N L+ R G + ARK F+ + K++ ++N A D
Sbjct: 378 LGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYN-------------TAADA 424
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
K D D + N V + A+ C + + I +++ ++ H
Sbjct: 425 NAKALDSD-----ESFNHEVEHTGVGAS-----PFTYACLLSGAACIGTIVKG---EQIH 471
Query: 259 SYLEKYPY-SNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+ + K + +N+ +I Y + G +A++VF M R+V W +I G ++
Sbjct: 472 ALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFAT 531
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ L+ F +M E G P+ T+ +VL+ CS + +D
Sbjct: 532 KALELFYEMLEIGVKPNEVTYIAVLSACSHVGLID 566
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 132/291 (45%), Gaps = 24/291 (8%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNT 57
++A ++ ++ +F+ M + ++W +I GY ++ A+ LF M + FT+++
Sbjct: 295 KSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSS 354
Query: 58 VIAGLMQSDNVQGAKEVFD-----GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V+ + K++ G+ + V NS+I+ Y +G ++ A + F+ + K
Sbjct: 355 VLKACASLPDFGIGKQLHGQTIKLGLSTINCVG-NSLINMYARSGTMECARKAFNILFEK 413
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA----SWTIMVNGLVREGRIVEARKLF 168
+++S+N A N + +D ES+ E+ V ++ +++G G IV+ ++
Sbjct: 414 NLISYNTAADA--NAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIH 471
Query: 169 DKMP----AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRID 224
+ ++ N +I+ Y G A +F M R++ +W +I+G
Sbjct: 472 ALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFAT 531
Query: 225 AAISYFKQMPETC----EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
A+ F +M E E T+ +++S GL+ EA + Y++ S
Sbjct: 532 KALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSIS 582
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGL 62
+ A +F+ M R+ +TW +I G+ K+GF A+ LF +M E + TY V++
Sbjct: 500 EAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSAC 559
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVC-------NGLIDEALRVFHGMPL-KDV 114
+ A + F+ M ++ + Y C +GL+ EA+ + MP D
Sbjct: 560 SHVGLIDEAWKHFNSMHYNHSIS--PRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADA 617
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGAR---DVASWTIMVNGLVREGRIVEARKLFDKM 171
+ W +G+ + L E K++ R D A++ ++ N EGR + L M
Sbjct: 618 LVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSM 677
Query: 172 PAKDV 176
K +
Sbjct: 678 KQKKL 682
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 34/219 (15%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVF-DGMEV--- 80
N +I Y K G + A+ +FN M R++ T+ ++I+G + A E+F + +E+
Sbjct: 487 NALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVK 546
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM 140
+ VT+ +++S GLIDEA + F+ M +S RM+
Sbjct: 547 PNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSIS-----------PRME--------- 586
Query: 141 GARDVASWTIMVNGLVREGRIVEARKLFDKMP-AKDVQAWNLMIAGYLDNGCVGVAEDLF 199
+ MV+ L R G ++EA + + MP D W + + + E
Sbjct: 587 ------HYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAA 640
Query: 200 QKMHDR---DLTSWKQLINGLVNSRRIDAAISYFKQMPE 235
+K+ +R D ++ L N + R D + K M +
Sbjct: 641 KKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQ 679
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 184/672 (27%), Positives = 325/672 (48%), Gaps = 85/672 (12%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PE----- 49
+ A +Q A+ +FD+ P + WN +R Y + + + LF+ M P+
Sbjct: 48 KCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIP 107
Query: 50 -----------------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
DMF + ++ + + A +VF+ +
Sbjct: 108 IALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQR 167
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNCQRMDLAESYFK 138
D V W SM++GY N +EAL +F M + D V + V + + C ++
Sbjct: 168 PDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQL-------- 219
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+V + + V+GLV R+ FD D+ N ++ Y GC +A +L
Sbjct: 220 ----LNVKAGSC-VHGLV-------IRREFD----GDLPLVNSLLNLYAKTGCEKIAANL 263
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPET-CEKTWNSIISVLIRNGLVKEA 257
F KM ++D+ SW +I N+ + A++ F +M E E +++S L + +
Sbjct: 264 FSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNL 323
Query: 258 HSYLEKYPYSNIASW----------TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMI 307
E IA W T +I Y + A+ +F+ + +DV W ++
Sbjct: 324 E---EGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALL 380
Query: 308 FGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARN 367
G +N + + + F M G PD +L S+L +H ++ N
Sbjct: 381 SGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFN 440
Query: 368 QFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM 427
V ++I +Y++CG++ A+ F + + D++ W+S+I HG +ALE+F++M
Sbjct: 441 SNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQM 500
Query: 428 -RLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
+ + +P+++TF+ +LSACS+AGLV++G FD M + Y L+P S H+ +VDLLGR G
Sbjct: 501 VKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIG 560
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
+ +AM+++N + I P VWGALLGACRIH+NI++GE A + + L+P+++G Y++
Sbjct: 561 QLGKAMDIINRMP---IPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYIL 617
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYL 606
L+ +Y G+ ++ + ++KE G+KK G S +++ G H FL+ D HP ++ L
Sbjct: 618 LSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYEL 677
Query: 607 LNLLHTEIEREI 618
L L ++ +E+
Sbjct: 678 LRKLEAQMGKEV 689
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 239/470 (50%), Gaps = 31/470 (6%)
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
+Y + +R + + IM V RI A +F+ +P WN+MI G+ +G
Sbjct: 745 AYGLQYDSRILTKFAIM---YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLS 801
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
+ +L+ KM ++ L K F ++C +S L R ++
Sbjct: 802 SLELYSKMMEKGLKPDK----------------FAFPFALKSCAG-----LSDLQRGKVI 840
Query: 255 KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
H +L SN +V Y + G++ +A VF+ M RD+ W MI G N
Sbjct: 841 ---HQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHN 897
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
E L FF M+ SG P+ + SVL C +L L G H+ I+ V+
Sbjct: 898 GYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVA 957
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
A++ MY++CG++ A F D++ W+++I HG+ KA++LF++M +
Sbjct: 958 TAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVR 1017
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
P +TF VLSACS++GL+++G+ YF M ++ + + ++Y C+VDLLGR G + EA++
Sbjct: 1018 PSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVD 1077
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
L+ + +E ++WG+LLGACRIHNN+ + E + + L+P ++G +++L+ +Y +
Sbjct: 1078 LIENMP---VEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAA 1134
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRL 603
R + +++ M G K G S ++ ++ H F GD SHP++ +L
Sbjct: 1135 KSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKL 1184
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 152/347 (43%), Gaps = 49/347 (14%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF-VQMKESGPSPDNAT 337
Y + + +A KVF+ +V +WN + EE L+ F + + +G +PDN T
Sbjct: 46 YAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFT 105
Query: 338 FTSVLTICSDLPTLDLGRQIHAQAIK---IARNQFTTVSNAMITMYARCGNIQSALLEFS 394
L C+ L L+LG+ IH A K I + F V +A++ +Y++CG + AL F
Sbjct: 106 IPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMF--VGSALVELYSKCGQMGEALKVFE 163
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTD-FKPDDITFVGVLSACSY----- 448
D + W S++ G + E+AL LF +M + D D +T V V+SAC+
Sbjct: 164 EFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVK 223
Query: 449 AGLVDQG---RYYFD-----------------CMK---NKYFLQPRS--AHYTCVVDLLG 483
AG G R FD C K N + P ++ ++
Sbjct: 224 AGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYA 283
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNI----KVGEIAGERVMELEPN 539
+EA+NL +E+ E + + L AC + N+ K+ +IA + EL+ +
Sbjct: 284 NNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFS 343
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
V L +MY+ C ++A +F ++ + V SW+ + G
Sbjct: 344 ---VSTALIDMYMKCSCPDEAVDLFQRLPKKDV-----VSWVALLSG 382
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 142/330 (43%), Gaps = 56/330 (16%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-------------- 50
RI A +F+ +P + WNVMIRG+ +G +++ L+++M E+
Sbjct: 767 RIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALK 826
Query: 51 -------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVT 85
D+F ++ + +++ A+ VFD M VRD+V+
Sbjct: 827 SCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVS 886
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVV-------SWNLVIGALVNCQRMDLAESYFK 138
W SMISGY NG E L F M V+ S L G L ++ + SY
Sbjct: 887 WTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVI 946
Query: 139 EMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAED 197
+ G D+ T +++ + G + AR LFD+ KD+ W+ MIA Y +G A D
Sbjct: 947 QTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAID 1006
Query: 198 LFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMPE---TCEKTWN--SIISVL 248
LF +M + ++ +++ +S ++ YF+ M E K N ++ +L
Sbjct: 1007 LFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLL 1066
Query: 249 IRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
R G + EA +E P AS ++G
Sbjct: 1067 GRAGQLSEAVDLIENMPVEPDASIWGSLLG 1096
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 154/370 (41%), Gaps = 55/370 (14%)
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM------PLKDVVSWNL 119
+ + A VF+ + WN MI G+ +G +L ++ M P K + L
Sbjct: 766 NRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFAL 825
Query: 120 -VIGALVNCQRMDLAESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
L + QR + + G + D+ +V+ + G I AR +FDKM +D+
Sbjct: 826 KSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLV 885
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
+W MI+GY NG F M +G++ +R
Sbjct: 886 SWTSMISGYAHNGYNSETLGFFDLMRS----------SGVIPNRV--------------- 920
Query: 238 EKTWNSIISVLIRNGLVKEA------HSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIK 290
SI+SVL+ G + HSY+ + + +I T ++ Y + G + A
Sbjct: 921 -----SILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975
Query: 291 VFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPT 350
+F+ +D+ W+ MI G + G + + F QM ++G P + TFT VL+ CS
Sbjct: 976 LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035
Query: 351 LDLGR---QIHAQAIKIARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISW 404
L+ G+ Q+ + IAR +SN M+ + R G + A+ ++P+ D W
Sbjct: 1036 LEEGKMYFQLMTEEFVIARK----LSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIW 1091
Query: 405 NSIICGLAYH 414
S++ H
Sbjct: 1092 GSLLGACRIH 1101
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 106/250 (42%), Gaps = 49/250 (19%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PER--------- 50
I+ A+ +FDKM RD V+W MI GY NG+ + F+ M P R
Sbjct: 869 IEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLA 928
Query: 51 ------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTW 86
D+ ++ + ++ A+ +FD +D+V W
Sbjct: 929 CGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCW 988
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEMG- 141
++MI+ Y +G +A+ +F M V V++ V+ A + ++ + YF+ M
Sbjct: 989 SAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTE 1048
Query: 142 ----ARDVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGVAE 196
AR ++++ MV+ L R G++ EA L + MP + D W ++ + + +AE
Sbjct: 1049 EFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAE 1108
Query: 197 DLFQKMHDRD 206
+ + D
Sbjct: 1109 KIADHLFHLD 1118
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 98/252 (38%), Gaps = 36/252 (14%)
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
Q+H+Q K T + + ++YA+C ++Q+A F P ++ WNS +
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 416 YAEKALELFERMRLTDFK-PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
E+ L LF M T + PD+ T L AC+ +++ G+ K +
Sbjct: 82 QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFV 141
Query: 475 YTCVVDLLGRFGLIDEAMNLLNE--------------------------------IRADG 502
+ +V+L + G + EA+ + E + D
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201
Query: 503 IEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI--LTEMYLSCGRREDA 560
+ + P +++ AC N+K G V+ E + + L+ L +Y G + A
Sbjct: 202 VVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGD-LPLVNSLLNLYAKTGCEKIA 260
Query: 561 KRIFAQMKENGV 572
+F++M E V
Sbjct: 261 ANLFSKMPEKDV 272
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
++ HA+ + + MY I +A + F +P WN +I G A
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
G +LEL+ +M KPD F L +C AGL D R
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSC--AGLSDLQR 836
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 183/667 (27%), Positives = 334/667 (50%), Gaps = 66/667 (9%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQ 64
R+ E+ +F MPQ++ ++W+ +I G +N FLD + +F +M + + ++ A +++
Sbjct: 231 RLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLK 290
Query: 65 S---------------------------------------DNVQGAKEVFDGMEVRDVVT 85
S +N+Q A+ +FD E ++ +
Sbjct: 291 SCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQS 350
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI--GALVNC-------QRMDLAESY 136
+N+MI+GY AL +F + K + ++ + GAL C + + L
Sbjct: 351 YNAMITGYSQKDNGFRALLLFRKLS-KSSLGFDEISLSGALRACATVKGLSEGLQLHGLA 409
Query: 137 FKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN----GCV 192
K +R++ ++ + + EA ++FD+M KD +WN +IA + N +
Sbjct: 410 TKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTL 469
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVN---SRRIDAAISYFKQMPETCEKTWNSIISVLI 249
+ + + + D ++ ++ + ++ + K + +S++ +
Sbjct: 470 NILVSMLRSGMEPDEYTFGSVLKACAGDSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYS 529
Query: 250 RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTV-WNVMIF 308
+ G++ EA K S T Y E E K + +++ V WN +I
Sbjct: 530 KCGMIDEAEKIHNKIFIGIGDSNT-----YSEHPETIEEPKGIQDRRVQEMIVSWNAIIS 584
Query: 309 GLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQ 368
G E+ +FF +M E G +PD T+++VL C++L ++ LG+QIHA IK
Sbjct: 585 GYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQY 644
Query: 369 FTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMR 428
+ + ++ MY++CGN+ + L F PI D ++WN++ICG A+HG E+A++LFE M
Sbjct: 645 DVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMV 704
Query: 429 LTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLI 488
L + P+ TFV +L AC++ GLV++G YF MK +Y L PR HY+ +VD+LG+ G +
Sbjct: 705 LMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEV 764
Query: 489 DEAMNLLNEIRADGIEVSPTVWGALLGACRIHN-NIKVGEIAGERVMELEPNNSGVYLIL 547
++A+ L+ E+ E +W LL AC+I+ N++ E+A ++ L+P +S Y++L
Sbjct: 765 EKALELIQEM---PFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILL 821
Query: 548 TEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLL 607
+ +Y G + A + M+ + +KKEPGCSW++I D H FL GD +HP++ + L
Sbjct: 822 SNIYADAGMWDKASELRTAMRSDKLKKEPGCSWVEIRDEFHTFLVGDKAHPRWKEIYNGL 881
Query: 608 NLLHTEI 614
L++ E+
Sbjct: 882 ALIYNEM 888
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 199/464 (42%), Gaps = 51/464 (10%)
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
V N ++ Y+ G + A ++F GMPL+DVVSWN +I M A F+ M
Sbjct: 84 VFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPT 143
Query: 143 RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN------LMIAGYLDNGCVGVA- 195
RDV SW M++G ++ G +E+ K+F +M V+ N L + L+N +G
Sbjct: 144 RDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQI 203
Query: 196 EDLFQKM-HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRN--- 251
+ +M +D D+ S L++ +R+D + + F MP+ +W++II+ ++N
Sbjct: 204 HGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFL 263
Query: 252 -------------------------------------GLVKEAHSYLEKYPYSNIASWTN 274
G AH+ + I T
Sbjct: 264 DGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVR-TA 322
Query: 275 VIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+ Y + + A ++F++ ++ +N MI G + D G L F ++ +S D
Sbjct: 323 TLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFD 382
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ + L C+ + L G Q+H A K ++ V+NA I MY +C + A F
Sbjct: 383 EISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFD 442
Query: 395 SVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQ 454
+ D +SWN+II + K L + M + +PD+ TF VL AC+ L
Sbjct: 443 EMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGDSLNHG 502
Query: 455 GRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
+ +K P + +VD+ + G+IDEA + N+I
Sbjct: 503 MEIHTTIVKLGMASNPYIG--SSLVDMYSKCGMIDEAEKIHNKI 544
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 137/531 (25%), Positives = 219/531 (41%), Gaps = 85/531 (16%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS-DN 67
A LFD MP RD V+WN MI GY + + A F MP RD+ ++N++++G +Q+ +N
Sbjct: 103 ATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGEN 162
Query: 68 VQGAKEV---------FD------------------------GMEVR-----DVVTWNSM 89
++ K FD G+ +R DVV+ +++
Sbjct: 163 LESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSAL 222
Query: 90 ISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVA-SW 148
+ Y +DE+ VF+ MP K+ +SW+ +I V +D FKEM V S
Sbjct: 223 LDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQ 282
Query: 149 TIMVNGL--------VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
+I + L +R G + A L KD + Y + A+ LF
Sbjct: 283 SIYASVLKSCATLPDLRLGTQLHAHALKSDF-VKDGIVRTATLDMYAKCNNMQDAQRLFD 341
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIR-----NGLVK 255
+ +L S+ +I G A+ F+++ ++ +S +R GL +
Sbjct: 342 MSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSE 401
Query: 256 --EAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+ H K +S NI I Y + + A +VF+ M +D WN +I +
Sbjct: 402 GLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQ 461
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N+ + L V M SG PD TF SVL C+ +L+ G +IH +K+ +
Sbjct: 462 NEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYI 520
Query: 373 SNAMITMYARCGNIQSALL-------------EFSSVP--------IHD------IISWN 405
++++ MY++CG I A +S P I D I+SWN
Sbjct: 521 GSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWN 580
Query: 406 SIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
+II G +E A F RM PD T+ VL C+ + G+
Sbjct: 581 AIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGK 631
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 194/429 (45%), Gaps = 27/429 (6%)
Query: 105 VFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE----GR 160
V H P V +++ V + +L + M + N L++ G
Sbjct: 40 VNHEKPATSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGN 99
Query: 161 IVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS 220
+ A KLFD MP +DV +WN MI GY + + A F+ M RD+ SW +++G + +
Sbjct: 100 LGYATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQT 159
Query: 221 RRIDAAISYFKQMPETCEKTWNSIISVLIR-------NGLVKEAHSYLEKYPY-SNIASW 272
++ F +M + + N SV+++ L + H + Y +++ S
Sbjct: 160 GENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSG 219
Query: 273 TNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPS 332
+ ++ Y + + + VF M ++ W+ +I G +N+ + GLK F +M++ G
Sbjct: 220 SALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVG 279
Query: 333 PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
+ + SVL C+ LP L LG Q+HA A+K + V A + MYA+C N+Q A
Sbjct: 280 VSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRL 339
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLV 452
F ++ S+N++I G + +AL LF ++ + D+I+ G L AC+ +
Sbjct: 340 FDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGL 399
Query: 453 DQGRYYFDCMKNKYFLQPRSAHYTCV----VDLLGRFGLIDEAMNLLNEI-RADGIEVSP 507
+G F + CV +D+ G+ +DEA + +E+ R D +
Sbjct: 400 SEGLQLHGLATKSNF-----SRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVS--- 451
Query: 508 TVWGALLGA 516
W A++ A
Sbjct: 452 --WNAIIAA 458
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 146/615 (23%), Positives = 258/615 (41%), Gaps = 119/615 (19%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFK--NGFLDNAMCLFNQMPERDM-FTYNTVIAGL 62
+Q+AQ LFD + ++N MI GY + NGF A+ LF ++ + + F ++ L
Sbjct: 333 MQDAQRLFDMSENLNLQSYNAMITGYSQKDNGF--RALLLFRKLSKSSLGFDEISLSGAL 390
Query: 63 MQSDNVQGAKEVFDGMEV----------RDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
V+G E G+++ R++ N+ I Y +DEA RVF M K
Sbjct: 391 RACATVKGLSE---GLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRK 447
Query: 113 DVVSWNLVIGA-------------LVNCQR-------------------------MDLAE 134
D VSWN +I A LV+ R M++
Sbjct: 448 DAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGDSLNHGMEIHT 507
Query: 135 SYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM--PAKDVQAWNLMIAGYLDNGCV 192
+ K A + + +V+ + G I EA K+ +K+ D ++ +
Sbjct: 508 TIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPK-- 565
Query: 193 GVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPE---TCEK-TWNSIISV- 247
G+ + Q+M + SW +I+G V ++ + A +F +M E T +K T+++++
Sbjct: 566 GIQDRRVQEM----IVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTC 621
Query: 248 --LIRNGLVKEAHSY-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
L GL K+ H++ ++K ++ + ++ Y + G + + +FE RD WN
Sbjct: 622 ANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWN 681
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
MI G + +GEE +K F M P++ATF S+L C+ + ++ G K
Sbjct: 682 AMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKK- 740
Query: 365 ARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELF 424
E+ P + +++++ L G EKALEL
Sbjct: 741 ---------------------------EYGLDP--RLEHYSNMVDILGKSGEVEKALELI 771
Query: 425 ERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ--PR-SAHYTCVVDL 481
+ M F+ DD+ + +LSAC +++ + L+ P+ S+ Y + ++
Sbjct: 772 QEM---PFEADDVIWRTLLSACK----INRNNVEAAEVAANALLRLDPQDSSTYILLSNI 824
Query: 482 LGRFGLIDEAMNLLNEIRADGIEVSPTV-WGALLGACRIHNNIKVGEIAGERVMELEPNN 540
G+ D+A L +R+D ++ P W + + VG+ A R E+
Sbjct: 825 YADAGMWDKASELRTAMRSDKLKKEPGCSWVEIRDE---FHTFLVGDKAHPRWKEIY--- 878
Query: 541 SGVYLILTEMYLSCG 555
+G+ LI EM LS G
Sbjct: 879 NGLALIYNEMNLSVG 893
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 108/282 (38%), Gaps = 52/282 (18%)
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+ +F T+++ V IF + + E P+ A F+ V C+
Sbjct: 14 VLLFHQHLTKNIPYRRVRIFSISTASVNHEK-----------PATSVANFSFVFKECAKQ 62
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
+LG+Q HA I VSN ++ +Y CGN+ A F +P+ D++SWN++I
Sbjct: 63 RAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMI 122
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
G A +A FE M D +++ +LS FL
Sbjct: 123 FGYAASNDMVRASLCFEMMPTRDV----VSWNSMLSG---------------------FL 157
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-E 527
Q G E++ + E+ G+E + +L C I N K+G +
Sbjct: 158 QT---------------GENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQ 202
Query: 528 IAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
I G + + L +MY C R +++ +F M +
Sbjct: 203 IHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQ 244
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/442 (35%), Positives = 252/442 (57%), Gaps = 7/442 (1%)
Query: 173 AKDVQAWNLMIAGYLDNGCVGV--AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
+ D+ N +I Y G +GV A LF+KM +RD SW ++ GLV + + A F
Sbjct: 149 SSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLF 208
Query: 231 KQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIK 290
+MP+ +WN+++ R + A EK P N SW+ +++GY + G++ A
Sbjct: 209 DEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARV 268
Query: 291 VFELMT--TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+F+ M ++V W ++I G E L +E K QM SG D A S+L C++
Sbjct: 269 MFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAES 328
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
L LG + H+ K N +V NA++ MYA+CG+++ A F+ +P D++SWN+++
Sbjct: 329 GLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMPKKDLVSWNTML 388
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
GL HG+ ++A+ELF RMR PD +TF+ VL +C++AGL+D+G YF M+ Y L
Sbjct: 389 HGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDL 448
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
P+ HY C+VDLLGR G + EA+ ++ + +E + +WGALLGACR+HN + + +
Sbjct: 449 VPKVEHYGCLVDLLGRGGRLKEAIKVVQTM---PMEPNVVIWGALLGACRMHNEVDIAKE 505
Query: 529 AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGH 588
+ +++L+P++ G Y +L+ +Y + E I ++MK GV+K G S +++ DG H
Sbjct: 506 VLDNLVKLDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIH 565
Query: 589 VFLSGDSSHPKFHRLRYLLNLL 610
F D SHPK ++ +L L
Sbjct: 566 EFTVFDKSHPKSDQIYQMLGSL 587
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 213/433 (49%), Gaps = 38/433 (8%)
Query: 68 VQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNC 127
V+ A ++F+ M RD V+WNSM+ G V G + +A ++F MP +D++SWN ++ C
Sbjct: 170 VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMPQRDLISWNTMLDGYARC 229
Query: 128 QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKM--PAKDVQAWNLMIAG 185
+ M A F++M R+ SW+ MV G + G + AR +FDKM PAK+V W ++IAG
Sbjct: 230 REMSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAG 289
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
Y + G + A+ L +M + +GL R DAA + + ++
Sbjct: 290 YAEKGLLKEADKLVDQM----------VASGL----RFDAAAAISILA----ACAESGLL 331
Query: 246 SVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWN 304
S+ +R AHS ++K ++ AS N ++ Y + G + A VF M +D+ WN
Sbjct: 332 SLGMR------AHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMPKKDLVSWN 385
Query: 305 VMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKI 364
M+ GLG + G+E ++ F +M++ G PD TF +VL C+ +D G K+
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445
Query: 365 ARNQFTTVSN--AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKAL 421
+ V + ++ + R G ++ A+ ++P+ +++ W +++ H + A
Sbjct: 446 Y-DLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAK 504
Query: 422 ELFERM-RLTDFKPDDITFVGVLSACS--YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
E+ + + +L P + T + + A + + G+ D MK+ +P A +
Sbjct: 505 EVLDNLVKLDPSDPGNYTLLSNIYAAAEDWEGVAD----IRSKMKSMGVEKPSGASSVEL 560
Query: 479 VDLLGRFGLIDEA 491
D + F + D++
Sbjct: 561 EDGIHEFTVFDKS 573
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 164/355 (46%), Gaps = 35/355 (9%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+++A LF+KM +RDTV+WN M+ G K G L +A LF++MP+RD+ ++NT++ G +
Sbjct: 170 VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMPQRDLISWNTMLDGYARC 229
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPL--KDVVSWNLVIGA 123
+ A E+F+ M R+ V+W++M+ GY G ++ A +F MP K+VV+W ++I
Sbjct: 230 REMSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAG 289
Query: 124 LVNCQRMDLAESYFKEMGARDV---------ASWTIMVNGLVREGRIVEARKLFDKMPA- 173
+ A+ +M A + +GL+ G + A + K
Sbjct: 290 YAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAESGLLSLG--MRAHSIIKKSNLN 347
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
+ N ++ Y G + A D+F M +DL SW +++GL AI F +M
Sbjct: 348 SNASVLNALLDMYAKCGSLKKAFDVFNDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRM 407
Query: 234 PETCEKTWN---SIISVLI---RNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM----- 282
+ E W + I+VL GL+ E Y Y + + Y +
Sbjct: 408 RK--EGIWPDKVTFIAVLCSCNHAGLIDEGIDYF--YSMEKVYDLVPKVEHYGCLVDLLG 463
Query: 283 --GEVGSAIKVFELMTTR-DVTVWNVMIFGL---GENDLGEEGLKFFVQMKESGP 331
G + AIKV + M +V +W ++ E D+ +E L V++ S P
Sbjct: 464 RGGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPSDP 518
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 160/325 (49%), Gaps = 28/325 (8%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ +++A+ LFD+MPQRD ++WN M+ GY + + A LF +MPER+ +++T++
Sbjct: 196 VKAGELRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWSTMVM 255
Query: 61 GLMQSDNVQGAKEVFDGM--EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
G ++ +++ A+ +FD M ++VVTW +I+GY GL+ EA ++ M V S
Sbjct: 256 GYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQM----VASGL 311
Query: 119 LVIGALVNCQRMDLAESYFKEMGAR--------DVASWTIMVNGLV----REGRIVEARK 166
A AES +G R ++ S ++N L+ + G + +A
Sbjct: 312 RFDAAAAISILAACAESGLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFD 371
Query: 167 LFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRR 222
+F+ MP KD+ +WN M+ G +G A +LF +M D ++ ++ ++
Sbjct: 372 VFNDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGL 431
Query: 223 IDAAISYFKQMPETCE-----KTWNSIISVLIRNGLVKEAHSYLEKYPY-SNIASWTNVI 276
ID I YF M + + + + ++ +L R G +KEA ++ P N+ W ++
Sbjct: 432 IDEGIDYFYSMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVIWGALL 491
Query: 277 VGYFEMGEVGSAIKVFELMTTRDVT 301
EV A +V + + D +
Sbjct: 492 GACRMHNEVDIAKEVLDNLVKLDPS 516
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 141/356 (39%), Gaps = 56/356 (15%)
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A++VF + +V + N +I N + F +M+ G DN T+ +L CS
Sbjct: 70 ALRVFNQVQEPNVHLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG--NIQSALLEFSSVPIHDIISWN 405
L L + + +H K+ + V NA+I Y+RCG ++ A+ F + D +SWN
Sbjct: 130 LSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 406 SIICGLAYHGYAEKALELFERMRLTDF---------------------------KPDDIT 438
S++ GL G A +LF+ M D + + ++
Sbjct: 190 SMLGGLVKAGELRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVS 249
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
+ ++ S AG ++ R FD M F +T ++ GL+ EA L++++
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMP---FPAKNVVTWTIIIAGYAEKGLLKEADKLVDQM 306
Query: 499 RADGIEVSPTVW----------GALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILT 548
A G+ G L R H+ IK + +N+ V L
Sbjct: 307 VASGLRFDAAAAISILAACAESGLLSLGMRAHSIIKKSNLN---------SNASVLNALL 357
Query: 549 EMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLR 604
+MY CG + A +F N + K+ SW + G V G + F R+R
Sbjct: 358 DMYAKCGSLKKAFDVF-----NDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMR 408
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 177/413 (42%), Gaps = 65/413 (15%)
Query: 156 VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
VR V +R++F++ + NL N + + ++ +DL +LI+
Sbjct: 7 VRAPSWVSSRRIFEERLQDLPKCANL-------NQVKQLHAQIIRRNLHQDLHIAPKLIS 59
Query: 216 GLVNSRRIDAAISYFKQMPETCEKTWNSII----------------SVLIRNGL------ 253
L R+ + A+ F Q+ E NS+I S + R GL
Sbjct: 60 ALSLCRQTNLALRVFNQVQEPNVHLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFT 119
Query: 254 ----------------VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVG--SAIKVFEL 294
VK H+++EK S+ N ++ Y G +G A+K+FE
Sbjct: 120 YPFLLKACSGLSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEK 179
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
M+ RD WN M+ GL + + K F +M P D ++ ++L + +
Sbjct: 180 MSERDTVSWNSMLGGLVKAGELRDARKLFDEM----PQRDLISWNTMLDGYARCREMSRA 235
Query: 355 RQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPI--HDIISWNSIICGL 411
++ + + RN TVS + M+ Y++ G+++ A + F +P ++++W II G
Sbjct: 236 FELFEKMPE--RN---TVSWSTMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAGY 290
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
A G ++A +L ++M + + D + +L+AC+ +GL+ G +K K L
Sbjct: 291 AEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAESGLLSLGMRAHSIIK-KSNLNSN 349
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK 524
++ ++D+ + G + +A ++ N++ + W +L +H + K
Sbjct: 350 ASVLNALLDMYAKCGSLKKAFDVFNDMPKKDL----VSWNTMLHGLGVHGHGK 398
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 96/230 (41%), Gaps = 17/230 (7%)
Query: 347 DLP---TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIIS 403
DLP L+ +Q+HAQ I+ +Q ++ +I+ + C AL F+ V ++
Sbjct: 25 DLPKCANLNQVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNVHL 84
Query: 404 WNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMK 463
NS+I A + +A +F M+ D+ T+ +L ACS + + + ++
Sbjct: 85 CNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVKMMHNHIE 144
Query: 464 NKYFLQPRSAHYTCVVDLLGRFG--LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN 521
K L ++D R G + +AM L ++ E W ++LG
Sbjct: 145 -KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS----ERDTVSWNSMLGGL---- 195
Query: 522 NIKVGEIAGERVM--ELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
+K GE+ R + E+ + + + + Y C A +F +M E
Sbjct: 196 -VKAGELRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPE 244
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 185/662 (27%), Positives = 326/662 (49%), Gaps = 100/662 (15%)
Query: 50 RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM 109
+D+F N+++ + A ++F+ ME RD V+WN+MISG+ +G ++L +F M
Sbjct: 72 QDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRM 131
Query: 110 PLKDVVSWN---LVIGALVNCQRMDLAESYFKEMG---ARDVASWTIMVNGLV----REG 159
+ S++ + AL +C + + G + V S +V+ L+ + G
Sbjct: 132 VKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCG 191
Query: 160 RIVEARKLFDK-----MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR--------- 205
I A +F++ + +++ WN+MI GY+ N C+ +A +LF +M +
Sbjct: 192 DIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTV 251
Query: 206 -----------DLTSWKQLIN-----GLVNSRRIDAAIS--YFK-QMPETCEKT------ 240
DL KQ+ GL + R+ A+ YFK PET +
Sbjct: 252 VVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQN 311
Query: 241 -----WNSIISVLIRNGLVKEAHSYLEKY--------PYSNIASW--------------- 272
W S++ +NG EA + ++ P +A+
Sbjct: 312 HNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAI 371
Query: 273 ----------TNVIVG------YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
++V VG Y + G++ A +VF ++TRD+ WN +I G +N
Sbjct: 372 HGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCA 431
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
+E LK F M+ P+ T +L++C+ L + L +++H ++ V+N++
Sbjct: 432 DEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSL 491
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
I+ YA+CG+I S+ F +P+ + ++WNSI+ G HG ++ FE+M+ + KPD
Sbjct: 492 ISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDH 551
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
TF +LS+CS++G VD G YF+ M Y L+PR YTC+VDLLGR G +++A +L+
Sbjct: 552 GTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIM 611
Query: 497 EIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
+ SP +WG+LL +C+ H N K+ E+ + EL+ ++ G ++L +Y
Sbjct: 612 S-----MPCSPDDRIWGSLLASCKNHGNTKLAEVVANHIFELDASSVGYRVLLANLYEDS 666
Query: 555 GRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
G + R+ +K+ G+KK+PGCSWI++++ H+F++GD SH + + + L E+
Sbjct: 667 GNLNEVFRVRTDIKQMGLKKQPGCSWIEVDNSIHIFVAGDYSHDRSGDIYATIESLSLEM 726
Query: 615 ER 616
+R
Sbjct: 727 KR 728
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESG-PSPDNATFTSVLTICSDLPTLDLGRQI 357
DV+ N MI E+ E+ ++ ++ E G P + F ++ L ++ G+QI
Sbjct: 2 DVSKVNRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQI 61
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H +K Q V N+++ MY +CG +A+ F + D +SWN++I G G
Sbjct: 62 HGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDY 121
Query: 418 EKALELFERM 427
K+L +F RM
Sbjct: 122 VKSLVMFRRM 131
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 15/176 (8%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
I ++ +F+K+P R+ VTWN ++ G+ +G D F +M E D T+ ++++
Sbjct: 501 IHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSS 560
Query: 62 LMQSDNVQGAKEVFDGM------EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-DV 114
S V + F+ M E R V + M+ G +++A + MP D
Sbjct: 561 CSHSGKVDAGWKYFNSMMEDYNLEPR-VEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDD 619
Query: 115 VSWNLVIGALVNCQRMDLAE---SYFKEMGARDVASWTIMVNGLVREGRIVEARKL 167
W ++ + N LAE ++ E+ A V ++ N G + E ++
Sbjct: 620 RIWGSLLASCKNHGNTKLAEVVANHIFELDASSVGYRVLLANLYEDSGNLNEVFRV 675
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 186/663 (28%), Positives = 322/663 (48%), Gaps = 79/663 (11%)
Query: 8 EAQNLFDKMP---QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIA 60
+A+++F+ M +RD V+W+ M+ Y NG +A+ +F + E + + Y VI
Sbjct: 115 KAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIR 174
Query: 61 GLMQSDNV-------------------------------------QGAKEVFDGMEVRDV 83
SD V + A +VFD M +V
Sbjct: 175 ACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234
Query: 84 VTWNSMISGYVCNGLIDEALRVFHGMPL----KDVVSWNLVIGALVNCQRMDLAE---SY 136
VTW MI+ + G EA+R F M L D + + V A + + L + S+
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSW 294
Query: 137 FKEMGARDVASWTI--MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
G D ++ M +G + + RK+FD+M V +W +I GY+ N +
Sbjct: 295 AIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 195 -AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
A +LF +M + G V + ++ + + ++ + GL
Sbjct: 355 EAINLFSEM----------ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL 404
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
SN + +VI + + + A + FE ++ +++ +N + G N
Sbjct: 405 A------------SNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVS 373
E+ K ++ E TF S+L+ +++ ++ G QIH+Q +K+ + V
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 374 NAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFK 433
NA+I+MY++CG+I +A F+ + ++ISW S+I G A HG+A + LE F +M K
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 434 PDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMN 493
P+++T+V +LSACS+ GLV +G +F+ M + ++P+ HY C+VDLL R GL+ +A
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLS 553
+N + + VW LGACR+H+N ++G++A +++EL+PN Y+ L+ +Y
Sbjct: 633 FINTM---PFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYAC 689
Query: 554 CGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTE 613
G+ E++ + +MKE + KE GCSWI++ D H F GD++HP H++ L+ L TE
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITE 749
Query: 614 IER 616
I+R
Sbjct: 750 IKR 752
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 135/580 (23%), Positives = 244/580 (42%), Gaps = 53/580 (9%)
Query: 14 DKMPQRDTVTWNVMIRGY-----FKNGFLDNAMCL-FNQMPERDMFTYNTVIAGLMQSDN 67
D + D+VT++ +++ F+ G L +A + F+ P D YN++I+ +S +
Sbjct: 55 DGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEP--DSVLYNSLISLYSKSGD 112
Query: 68 VQGAKEVFDGME---VRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNL 119
A++VF+ M RDVV+W++M++ Y NG +A++VF G+ D +
Sbjct: 113 SAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYC-YTA 171
Query: 120 VIGALVNCQRMDLAE---SYFKEMG--ARDVASWTIMVNGLVR-EGRIVEARKLFDKMPA 173
VI A N + + + + G DV +++ V+ E A K+FDKM
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
+V W LMI + G A F M S K ++ + ++ +S KQ+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 234 PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE 293
+W IR+GLV + S ++ G V KVF+
Sbjct: 292 -----HSW------AIRSGLVDDVE-----------CSLVDMYAKCSADGSVDDCRKVFD 329
Query: 294 LMTTRDVTVWNVMIFGLGEN-DLGEEGLKFFVQMKESGP-SPDNATFTSVLTICSDLPTL 351
M V W +I G +N +L E + F +M G P++ TF+S C +L
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
+G+Q+ QA K ++V+N++I+M+ + ++ A F S+ +++S+N+ + G
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
+ E+A +L + + TF +LS + G + +G + K L
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV-KLGLSCN 508
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHN-NIKVGEIAG 530
++ + + G ID A + N + + W +++ H I+V E
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFMENRNV----ISWTSMITGFAKHGFAIRVLETFN 564
Query: 531 ERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKEN 570
+ + E N Y+ + G + R F M E+
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYED 604
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 197/450 (43%), Gaps = 47/450 (10%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAGL 62
+ A +FDKM + + VTW +MI + GF A+ F M E D FT ++V +
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 63 MQSDNVQGAKE-----VFDGMEVRDV-VTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+ +N+ K+ + G+ V DV + M + +G +D+ +VF M V+S
Sbjct: 280 AELENLSLGKQLHSWAIRSGL-VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS 338
Query: 117 WN-LVIGALVNCQRMDLAESYFKEM---GARDVASWTIMVNGLVREGRIVEAR------- 165
W L+ G + NC A + F EM G + +T + G + + R
Sbjct: 339 WTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS-SAFKACGNLSDPRVGKQVLG 397
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
+ F + A + N +I+ ++ + + A+ F+ + +++L S+ ++G + +
Sbjct: 398 QAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 226 AISYFKQMPETCEK-------TWNSIISVLIRNGLVKEA---HSYLEKYPYSNIASWTNV 275
A FK + E E+ T+ S++S + G +++ HS + K S N
Sbjct: 458 A---FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514
Query: 276 IVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
++ Y + G + +A +VF M R+V W MI G ++ L+ F QM E G P+
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 335 NATFTSVLTICSDLPTLDLG-RQIHA----QAIKIARNQFTTVSNAMITMYARCGNIQSA 389
T+ ++L+ CS + + G R ++ IK + M+ + R G + A
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA----CMVDLLCRAGLLTDA 630
Query: 390 LLEFSSVPIH-DIISWNSIICGLAYHGYAE 418
+++P D++ W + + H E
Sbjct: 631 FEFINTMPFQADVLVWRTFLGACRVHSNTE 660
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 130/279 (46%), Gaps = 26/279 (9%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFL-DNAMCLFNQM-----PERDMFTYN 56
+ + + + +FD+M ++W +I GY KN L A+ LF++M E + FT++
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVT----WNSMISGYVCNGLIDEALRVFHGMPLK 112
+ + + K+V R + + NS+IS +V + +++A R F + K
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437
Query: 113 DVVSWNLVIGALVNCQRMDLAESY--FKEMGARD--VASWTI--MVNGLVREGRIVEARK 166
++VS+N + C+ ++ +++ E+ R+ V+++T +++G+ G I + +
Sbjct: 438 NLVSYNTFLDG--TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 495
Query: 167 LFDKMP----AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
+ ++ + + N +I+ Y G + A +F M +R++ SW +I G
Sbjct: 496 IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGF 555
Query: 223 IDAAISYFKQMPE----TCEKTWNSIISVLIRNGLVKEA 257
+ F QM E E T+ +I+S GLV E
Sbjct: 556 AIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG 594
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 103/235 (43%), Gaps = 51/235 (21%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYN 56
+++ R+++AQ F+ + +++ V++N + G +N + A L +++ ER++ FT+
Sbjct: 419 VKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFA 478
Query: 57 TVIAGLM-----------------------------------QSDNVQGAKEVFDGMEVR 81
++++G+ + ++ A VF+ ME R
Sbjct: 479 SLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR 538
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV--IGALVNCQRMDLAESYFKE 139
+V++W SMI+G+ +G L F+ M +++ V N V + L C + L ++
Sbjct: 539 NVISWTSMITGFAKHGFAIRVLETFNQM-IEEGVKPNEVTYVAILSACSHVGLVSEGWRH 597
Query: 140 MGA--------RDVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAG 185
+ + + MV+ L R G + +A + + MP + DV W +
Sbjct: 598 FNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 120/292 (41%), Gaps = 52/292 (17%)
Query: 326 MKESGPSP-DNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
M G P D+ TF+S+L C LG+ +HA+ I+ + + N++I++Y++ G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 385 NIQSALLEFSSVP---IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+ A F ++ D++SW++++ +G A+++F P+D +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 442 VLSACSYAGLVDQGRYYF---------------------------DCMKNKYFLQPRSAH 474
V+ ACS + V GR + +N Y + + +
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 475 -----YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGE-- 527
+T ++ + G EA+ ++ G E ++ AC N+ +G+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 528 ----IAGERVMELEPNNSGVYLILTEMYLSC---GRREDAKRIFAQMKENGV 572
I V ++E + L +MY C G +D +++F +M+++ V
Sbjct: 292 HSWAIRSGLVDDVECS-------LVDMYAKCSADGSVDDCRKVFDRMEDHSV 336
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 255/488 (52%), Gaps = 49/488 (10%)
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF------------------------ 199
AR +FD++P+ D WN MI YL++ + LF
Sbjct: 57 ARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACG 116
Query: 200 --------QKMHDR--------DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNS 243
QK+H + DL LI I+ A + +M +N
Sbjct: 117 RLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNV 176
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+++ +R G + AH ++ P ++ SW +I G+ +G+VG+A K+F+ RD+ W
Sbjct: 177 LLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISW 236
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
+ MI + E L+ F +M+ + PD T SVL+ C D+ L +G+ IH
Sbjct: 237 SSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHEC--- 293
Query: 364 IARNQFT---TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
I RN+ + +++ MYA+CG+I ++L F+ + D+ +W+++I GLA HG+ E A
Sbjct: 294 IERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELA 353
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVD 480
L+ F +M D KP+D+TF+GVLSACS+ GLVD+G YF M Y + P+ HY CVVD
Sbjct: 354 LDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVD 413
Query: 481 LLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNN 540
+LGR G + EAM L I++ VW ALLGACRI+ N+++ E A ++ELEP+
Sbjct: 414 ILGRAGRLQEAMEL---IKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHV 470
Query: 541 SGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKF 600
G Y++L+ +Y + + MK ++K PG S I++++ H F++GD SHP+
Sbjct: 471 DGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPES 530
Query: 601 HRLRYLLN 608
++ +L+
Sbjct: 531 KKILRMLS 538
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 188/426 (44%), Gaps = 36/426 (8%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER-----DMFTYNTVIAGLM 63
A+++FD++P DT WN MIR Y + +M LF QM + D ++ + VI
Sbjct: 57 ARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACG 116
Query: 64 Q-SDNVQGAKEVFDGMEV---RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL 119
+ D G K +++ D+ ++I Y G I+ A + M D+V +N+
Sbjct: 117 RLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNV 176
Query: 120 VIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAW 179
++ V ++LA F M RD+ SW M++G G + A+KLFD+ +D+ +W
Sbjct: 177 LLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISW 236
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK 239
+ MIA Y A LF +M QL N L + + + +S +
Sbjct: 237 SSMIAAYAKARQSNEALRLFHEM---------QLANVLPDKVTMVSVLSACGDVGAL--- 284
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTR 298
G+ K H +E+ ++ T+++ Y + G++ ++++VF M R
Sbjct: 285 ------------GMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNR 332
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
DV W+ MI GL + GE L F +M P++ TF VL+ CS + +D G
Sbjct: 333 DVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYF 392
Query: 359 AQAIKIAR-NQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGY 416
K+ + ++ + R G +Q A+ S+P D I W +++ +
Sbjct: 393 TSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKN 452
Query: 417 AEKALE 422
E A E
Sbjct: 453 VEIAEE 458
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 146/279 (52%), Gaps = 17/279 (6%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
I+ A+N+ D+M D V +NV++ Y + G ++ A LF++MPERD+ ++NT+I G
Sbjct: 156 IEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASL 215
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGAL 124
+V AK++FD RD+++W+SMI+ Y +EALR+FH M L +V+ + ++ L
Sbjct: 216 GDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVL 275
Query: 125 VNCQRMD-------LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
C + + E + D+ T +V+ + G I + ++F+ M +DV
Sbjct: 276 SACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVF 335
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR----IDAAISYFKQM 233
AW+ MI G ++G +A D F KM D+ G++++ +D +YF M
Sbjct: 336 AWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSM 395
Query: 234 PETCE-----KTWNSIISVLIRNGLVKEAHSYLEKYPYS 267
+ + + + ++ +L R G ++EA ++ P++
Sbjct: 396 SKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFA 434
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 182/654 (27%), Positives = 328/654 (50%), Gaps = 78/654 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVIAG 61
+Q A F +P + + WN ++RG G A+ ++ M + D +TY V+
Sbjct: 83 LQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKA 142
Query: 62 ----------------------------------LMQSDNVQGAKEVFDGMEVRDVVTWN 87
+ +V+ A+ +F+ M RD+ +W
Sbjct: 143 CSSLHALQLGRWVHETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWT 202
Query: 88 SMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV-NCQR-------MDLAESYFKE 139
++I G + NG EAL +F M + ++ ++++ +++ C R M L +
Sbjct: 203 ALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRS 262
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
D+ +++ + G +EA ++F M DV +W+ +IAGY N C L+
Sbjct: 263 GFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQN-C------LY 315
Query: 200 QKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHS 259
Q+ S+K I G++N AI +P + L++ G KE H+
Sbjct: 316 QE-------SYKLYI-GMINVGLATNAIVATSVLPALGKLE-------LLKQG--KEMHN 358
Query: 260 Y-LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
+ L++ S++ + +IV Y G + A +FE + +D+ VWN MI +G N +G+
Sbjct: 359 FVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMI--VGYNLVGDF 416
Query: 319 GLKFFVQMKESGPS--PDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAM 376
FF + G P+ T S+L IC+ + L G++IH K +V N++
Sbjct: 417 ESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSL 476
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDD 436
I MY++CG ++ F + + ++ ++N++I HG EK L +E+M+ +P+
Sbjct: 477 IDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNK 536
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
+TF+ +LSACS+AGL+D+G ++ M N Y ++P HY+C+VDL+GR G +D A +
Sbjct: 537 VTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFIT 596
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
+ + V+G+LLGACR+HN +++ E+ ER+++L+ ++SG Y++L+ +Y S R
Sbjct: 597 RMP---MTPDANVFGSLLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKR 653
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL 610
ED ++ + +K+ G++K+PG SWIQ+ +VF + + HP F ++ LN L
Sbjct: 654 WEDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVFHATSAFHPAFAKIEETLNSL 707
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 207/484 (42%), Gaps = 51/484 (10%)
Query: 67 NVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV----SWNLVIG 122
++Q A F + + ++ WN+++ G V G +A+ +H M V ++ LV+
Sbjct: 82 SLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLK 141
Query: 123 ALVNCQRMDLAESYFKEMGARDVASWTI---MVNGLVREGRIVEARKLFDKMPAKDVQAW 179
A + + L + M + A+ + +++ + G + +AR++F++MP +D+ +W
Sbjct: 142 ACSSLHALQLGRWVHETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASW 201
Query: 180 NLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS-RRIDAA-------ISYFK 231
+I G + NG A LF+KM L ++ ++ + R++A + +
Sbjct: 202 TALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVR 261
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
E+ N++I + + G EAH YS++ SW+ +I GY
Sbjct: 262 SGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGY------------ 309
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
+N L +E K ++ M G + + TSVL L L
Sbjct: 310 -------------------SQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELL 350
Query: 352 DLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL 411
G+++H +K V +A+I MYA CG+I+ A F DI+ WNS+I G
Sbjct: 351 KQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGY 410
Query: 412 AYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR 471
G E A F R+ + +P+ IT V +L C+ G + QG+ + K L
Sbjct: 411 NLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYV-TKSGLGLN 469
Query: 472 SAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGE 531
+ ++D+ + G ++ + ++ + T + ++ AC H + G E
Sbjct: 470 VSVGNSLIDMYSKCGFLELGEKVFKQMMVRNV----TTYNTMISACGSHGQGEKGLAFYE 525
Query: 532 RVME 535
++ E
Sbjct: 526 QMKE 529
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 1/168 (0%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y G + A F + + + WN ++ GL + + F+ M + G +PDN T+
Sbjct: 77 YVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTY 136
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
VL CS L L LGR +H + + V A+I M+A+CG+++ A F +P
Sbjct: 137 PLVLKACSSLHALQLGRWVH-ETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPD 195
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
D+ SW ++ICG ++G +AL LF +MR PD + +L AC
Sbjct: 196 RDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPAC 243
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 135/334 (40%), Gaps = 42/334 (12%)
Query: 132 LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
L +F+ + + +VN V G + A F +P K + AWN ++ G + G
Sbjct: 54 LVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGH 113
Query: 192 VGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWN-------SI 244
A + M +T ++ + A+ + + ET ++
Sbjct: 114 FTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHETMHGKTKANVYVQCAV 173
Query: 245 ISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWN 304
I + + G V++A E+ P ++ASWT +I G T+WN
Sbjct: 174 IDMFAKCGSVEDARRMFEEMPDRDLASWTALICG----------------------TMWN 211
Query: 305 VMIFGLGENDLGE--EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
GE E L F +M+ G PD+ S+L C L + LG + A+
Sbjct: 212 -----------GECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAV 260
Query: 363 KIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
+ VSNA+I MY +CG+ A FS + D++SW+++I G + + +++ +
Sbjct: 261 RSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYK 320
Query: 423 LFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
L+ M + I VL A L+ QG+
Sbjct: 321 LYIGMINVGLATNAIVATSVLPALGKLELLKQGK 354
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 130/301 (43%), Gaps = 46/301 (15%)
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIA 365
M+FG N L F + + S P + T TS + S P L R +HA + +
Sbjct: 1 MLFGTKVNAHAIAMLITFTRQQHS--LPIHFTVTSFHRLKSP-PNLHEARTLHALLLVLG 57
Query: 366 RNQFT-----TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKA 420
Q T + ++ ++ +Y G++Q A L F ++P II+WN+I+ GL G+ KA
Sbjct: 58 FFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKA 117
Query: 421 LELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC-VV 479
+ + M PD+ T+ VL ACS + GR+ + M K + + C V+
Sbjct: 118 IHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHETMHGK---TKANVYVQCAVI 174
Query: 480 DLLGRFGLID-------------------------------EAMNLLNEIRADGIEVSPT 508
D+ + G ++ EA+ L ++R++G+
Sbjct: 175 DMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSV 234
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQ 566
+ ++L AC +K+G +A + S +Y+ + +MY CG +A R+F+
Sbjct: 235 IVASILPACGRLEAVKLG-MALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSH 293
Query: 567 M 567
M
Sbjct: 294 M 294
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 203/662 (30%), Positives = 321/662 (48%), Gaps = 104/662 (15%)
Query: 36 FLDNAMCLFNQMPE-RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYV 94
L+ MC + D+F + +++ +S ++ A++VF+ ME R+ VT N ++ G V
Sbjct: 226 LLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLV 285
Query: 95 CNGLIDEALRVFHGM-PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV- 152
+EA ++F M + DV + VI L + LAE + G R+V I
Sbjct: 286 RQKWGEEATKLFMDMNSMIDVSPESYVI-LLSSFPEYSLAEEVGLKKG-REVHGHVITTG 343
Query: 153 ---------NGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
NGLV + G I +AR++F M KD +WN MI G NGC A + +
Sbjct: 344 LVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERY 403
Query: 200 QKMHDRDLT----------------SWKQL---INGLVNSRRIDAAISY----------- 229
+ M D+ W +L I+G ID +S
Sbjct: 404 KSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAET 463
Query: 230 ---------FKQMPETCEKTWNSIISVLIRNG---------------------------- 252
F MPE + +WNSII L R+
Sbjct: 464 GYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSV 523
Query: 253 -----------LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTR-D 299
L K+ H K ++ A+ N ++ Y + GE+ K+F M R D
Sbjct: 524 LSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRD 583
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
WN MI G N+L + L M ++G D+ + +VL+ + + TL+ G ++HA
Sbjct: 584 NVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHA 643
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
+++ V +A++ MY++CG + AL F+++P+ + SWNS+I G A HG E+
Sbjct: 644 CSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEE 703
Query: 420 ALELFERMRLT-DFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
AL+LFE M+L PD +TFVGVLSACS+AGL+++G +F+ M + Y L PR H++C+
Sbjct: 704 ALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCM 763
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK--VGEIAGERVMEL 536
D+LGR G +D+ + + ++ ++ + +W +LGAC N K +G+ A E + +L
Sbjct: 764 ADVLGRAGELDKLEDFIEKMP---MKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQL 820
Query: 537 EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSS 596
EP N+ Y++L MY + GR ED + +MK+ VKKE G SW+ + DG H+F++GD S
Sbjct: 821 EPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKS 880
Query: 597 HP 598
HP
Sbjct: 881 HP 882
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 195/438 (44%), Gaps = 34/438 (7%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
A+ +FD+MP R+ V+W ++ GY +NG A+ M + +F+ ++++
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQE 114
Query: 69 QGAKEVFDGMEVR----------DVVTWNSMISGY-VCNGLIDEALRVFHGMPLKDVVSW 117
G+ + G ++ D V N +IS Y C G + AL F + +K+ VSW
Sbjct: 115 IGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSW 174
Query: 118 NLVIGALVNCQRMDLAESYFKEM---GARDV----ASWTIMVNGLVR-EGRIVEARKLFD 169
N +I A F M G+R S L + R++E
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234
Query: 170 KMPA--KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
+ D+ + +++ + +G + A +F +M R+ + L+ GLV + + A
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294
Query: 228 SYF---KQMPETCEKTWNSIISVLIRNGLVKEA--HSYLEKYPYSNIASWTNVIVG---- 278
F M + +++ ++S L +E E + + + +VG
Sbjct: 295 KLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354
Query: 279 ----YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
Y + G + A +VF MT +D WN MI GL +N E ++ + M+ P
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFS 394
+ T S L+ C+ L LG+QIH +++K+ + +VSNA++T+YA G + FS
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFS 474
Query: 395 SVPIHDIISWNSIICGLA 412
S+P HD +SWNSII LA
Sbjct: 475 SMPEHDQVSWNSIIGALA 492
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 274 NVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSP 333
N+I Y E G+ SA KVF+ M R+ W ++ G N +E L F M + G
Sbjct: 41 NLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFS 100
Query: 334 DNATFTSVLTICSDLPTLDL--GRQIHAQAIKIARNQFTTVSNAMITMYARC-GNIQSAL 390
+ F SVL C ++ ++ + GRQIH K++ VSN +I+MY +C G++ AL
Sbjct: 101 NQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYAL 160
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG-VLSACS 447
F + + + +SWNSII + G A +F M+ +P + TF V +ACS
Sbjct: 161 CAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 131/294 (44%), Gaps = 16/294 (5%)
Query: 166 KLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDA 225
+L+ KDV N +I YL+ G A +F +M R+ SW +++G +
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 226 AISYFKQMPE----TCEKTWNSIISVLIRNGLV-----KEAHSYLEKYPYSNIASWTNVI 276
A+ + + M + + + + S++ G V ++ H + K Y+ A +NV+
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 277 VGYF--EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
+ + +G VG A+ F + ++ WN +I + + F M+ G P
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 335 NATFTSVLTICSDL--PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLE 392
TF S++T L P + L QI K V + +++ +A+ G++ A
Sbjct: 206 EYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKV 265
Query: 393 FSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSA 445
F+ + + ++ N ++ GL + E+A +LF M + D P+ ++V +LS+
Sbjct: 266 FNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSS 317
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 175/638 (27%), Positives = 315/638 (49%), Gaps = 35/638 (5%)
Query: 7 QEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSD 66
Q + Q D +I Y ++A + +P+ +++++++I L ++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 67 NVQGAKEVFDGMEVRDVVTWNSMISGY--VCNGLIDEALRVFHGMPLKDVVSW----NLV 120
+ VF M ++ + ++ VC L A +V + VS V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAEL--SAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 121 IGALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
G++ + C RM A F M +DV + + ++ R+G + E ++ +M + +
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 177 QA----WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS----------RR 222
+A WN +++G+ +G A +FQK+H + ++ ++ S R
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM 282
I + + + C +++I + ++G V S ++ I G
Sbjct: 274 IHGYVIKQGLLKDKC--VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 283 GEVGSAIKVFELMTTR----DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
G V A+++FEL + +V W +I G +N E L+ F +M+ +G P++ T
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
S+L C ++ L GR H A+++ V +A+I MYA+CG I + + F+ +P
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
+++ WNS++ G + HG A++ + +FE + T KPD I+F +LSAC GL D+G Y
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
F M +Y ++PR HY+C+V+LLGR G + EA +L+ E+ E VWGALL +CR
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP---FEPDSCVWGALLNSCR 568
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
+ NN+ + EIA E++ LEP N G Y++L+ +Y + G + I +M+ G+KK PGC
Sbjct: 569 LQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGC 628
Query: 579 SWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
SWIQ+ + + L+GD SHP+ ++ ++ + E+ +
Sbjct: 629 SWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRK 666
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/627 (27%), Positives = 313/627 (49%), Gaps = 35/627 (5%)
Query: 18 QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDG 77
Q D +I Y ++A + +P+ +++++++I L ++ + VF
Sbjct: 47 QNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSR 106
Query: 78 MEVRDVVTWNSMISGY--VCNGLIDEALRVFHGMPLKDVVSW----NLVIGAL----VNC 127
M ++ + ++ VC L A +V + VS V G++ + C
Sbjct: 107 MFSHGLIPDSHVLPNLFKVCAEL--SAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRC 164
Query: 128 QRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA----WNLMI 183
RM A F M +DV + + ++ R+G + E ++ +M + ++A WN ++
Sbjct: 165 GRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGIL 224
Query: 184 AGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNS----------RRIDAAISYFKQM 233
+G+ +G A +FQK+H + ++ ++ S R I + +
Sbjct: 225 SGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLL 284
Query: 234 PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFE 293
+ C +++I + ++G V S ++ I G G V A+++FE
Sbjct: 285 KDKC--VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 342
Query: 294 LMTTR----DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP 349
L + +V W +I G +N E L+ F +M+ +G P++ T S+L C ++
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 350 TLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIIC 409
L GR H A+++ V +A+I MYA+CG I + + F+ +P +++ WNS++
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMN 462
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQ 469
G + HG A++ + +FE + T KPD I+F +LSAC GL D+G YF M +Y ++
Sbjct: 463 GFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIK 522
Query: 470 PRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIA 529
PR HY+C+V+LLGR G + EA +L+ E+ E VWGALL +CR+ NN+ + EIA
Sbjct: 523 PRLEHYSCMVNLLGRAGKLQEAYDLIKEMP---FEPDSCVWGALLNSCRLQNNVDLAEIA 579
Query: 530 GERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHV 589
E++ LEP N G Y++L+ +Y + G + I +M+ G+KK PGCSWIQ+ + +
Sbjct: 580 AEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYT 639
Query: 590 FLSGDSSHPKFHRLRYLLNLLHTEIER 616
L+GD SHP+ ++ ++ + E+ +
Sbjct: 640 LLAGDKSHPQIDQITEKMDEISKEMRK 666
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 118/277 (42%), Gaps = 52/277 (18%)
Query: 11 NLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNTVIAGLMQSD 66
+LF++ + N I G +NG +D A+ +F E+ M ++ ++IAG Q+
Sbjct: 308 SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367
Query: 67 NVQGAKEVFDGMEVRDV----VTWNSMISGYVCNGLIDEAL---RVFHGMPLKDVVSWNL 119
A E+F M+V V VT SM+ C + AL R HG ++ + N+
Sbjct: 368 KDIEALELFREMQVAGVKPNHVTIPSMLPA--CGNI--AALGHGRSTHGFAVRVHLLDNV 423
Query: 120 VIG-ALVN----CQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAK 174
+G AL++ C R++L++ F M +++ W ++NG G+ E +F
Sbjct: 424 HVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF------ 477
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
E L + D S+ L++ D YFK M
Sbjct: 478 ---------------------ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 235 ETCE-----KTWNSIISVLIRNGLVKEAHSYLEKYPY 266
E + ++ ++++L R G ++EA+ +++ P+
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPF 553
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 272/544 (50%), Gaps = 28/544 (5%)
Query: 101 EALRVFHGMPLKD-VVSWNLVIGALVNC------QRMDLAESYFKEMGARDVASWTIMVN 153
+ L HG+ L+ + V GAL+ C D A F + +V W I++
Sbjct: 47 QYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIK 106
Query: 154 GLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR-------- 205
G + ++ +A + +M D + V A +++H
Sbjct: 107 GCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGS 165
Query: 206 DLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYP 265
D+ I+ + R++ A F E+ WN++I ++ G+++ A + P
Sbjct: 166 DVHIKSAGIHMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQMP 224
Query: 266 YSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQ 325
NI SW +I G + G +G A K+F+ M+ RD W+ M+ G +E L+ F Q
Sbjct: 225 VKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQ 284
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ P +SVL CS++ +D GR +HA + + + A++ MYA+CG
Sbjct: 285 MQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGR 344
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA 445
+ F + +I +WN++I GLA HG AE ALELF +++ KP+ IT VGVL+A
Sbjct: 345 LDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTA 404
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
C++AG VD+G F M+ Y + P HY C+VDLLGR GL EA +L+N + ++
Sbjct: 405 CAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMP---MKP 461
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFA 565
+ VWGALLGACRIH N + E G+ ++ELEP NSG Y++L+ +Y GR +D +I
Sbjct: 462 NAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRK 521
Query: 566 QMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLL--------HTEIERE 617
MK+ G+K PG S + +N H F GD SHP+ + L ++ H+ +
Sbjct: 522 LMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQ 581
Query: 618 ILFD 621
+LFD
Sbjct: 582 VLFD 585
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 222/511 (43%), Gaps = 72/511 (14%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM---PERDMFTYNTVIAGLMQS 65
A +F +P + WN++I+G +N L A+ + +M + FTY T+ +
Sbjct: 86 ALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVA 145
Query: 66 DNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 120
VQ +++ G V+ DV ++ I Y G +++A ++F+ DVV WN +
Sbjct: 146 QAVQEGRQI-HGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGE-SDVVCWNTM 203
Query: 121 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
I + C ++ A+ F +M +++ SW +M+NGL + G + +ARKLFD+M +D +W+
Sbjct: 204 IDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWS 263
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
M+ GY+ G A ++FQ+M + + +++ ++ + AI +
Sbjct: 264 SMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAID---------QGR 314
Query: 241 WNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
W H+YL++ + T ++ Y + G + +VFE M R+
Sbjct: 315 W---------------VHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKERE 359
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHA 359
+ WN MI GL + E+ L+ F +++E P+ T VLT C+ +D G +I
Sbjct: 360 IFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRI-- 417
Query: 360 QAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
F T + EF V ++ + ++ L G +
Sbjct: 418 ---------FQT------------------MREFYGVD-PELEHYGCMVDLLGRSGLFSE 449
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPR-SAHYTCV 478
A +L M + KP+ + +L AC G D + L+P+ S Y +
Sbjct: 450 AEDLINSMPM---KPNAAVWGALLGACRIHGNFDLAERVGKILLE---LEPQNSGRYVLL 503
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
++ + G D+ + ++ GI+ P V
Sbjct: 504 SNIYAKVGRFDDVSKIRKLMKDRGIKTVPGV 534
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 149/306 (48%), Gaps = 28/306 (9%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLM 63
R+++A+ +F + D V WN MI GY K G L+ A LF QMP +++ ++N +I GL
Sbjct: 181 GRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLA 239
Query: 64 QSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGA 123
+ N+ A+++FD M RD ++W+SM+ GY+ G EAL +F M ++ ++ +
Sbjct: 240 KGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSS 299
Query: 124 -LVNCQRMDLAE------SYFKEMGAR-DVASWTIMVNGLVREGRIVEARKLFDKMPAKD 175
L C + + +Y K + D T +++ + GR+ ++F++M ++
Sbjct: 300 VLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKERE 359
Query: 176 VQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT----SWKQLINGLVNSRRIDAAISYFK 231
+ WN MI G +G A +LF K+ + + + ++ ++ +D + F+
Sbjct: 360 IFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQ 419
Query: 232 QM-------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNV-----IVG 278
M PE + + ++ +L R+GL EA + P N A W + I G
Sbjct: 420 TMREFYGVDPEL--EHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHG 477
Query: 279 YFEMGE 284
F++ E
Sbjct: 478 NFDLAE 483
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 126/312 (40%), Gaps = 63/312 (20%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYNT 57
+ + +A+ LFD+M +RD ++W+ M+ GY G A+ +F QM + F ++
Sbjct: 240 KGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSS 299
Query: 58 VIAGL--------------------MQSDNVQGAK---------------EVFDGMEVRD 82
V+A ++ D V G EVF+ M+ R+
Sbjct: 300 VLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKERE 359
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQRMDLAESYFKEMG 141
+ TWN+MI G +G ++AL +F + + + ++G L C A + F + G
Sbjct: 360 IFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTAC-----AHAGFVDKG 414
Query: 142 AR-------------DVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYL 187
R ++ + MV+ L R G EA L + MP K + W ++
Sbjct: 415 LRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACR 474
Query: 188 DNGCVGVAE---DLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSI 244
+G +AE + ++ ++ + L N R D K M + KT
Sbjct: 475 IHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPG- 533
Query: 245 ISVLIRNGLVKE 256
+S++ NG V E
Sbjct: 534 VSIVDLNGTVHE 545
>gi|345505220|gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
Length = 612
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 170/532 (31%), Positives = 279/532 (52%), Gaps = 29/532 (5%)
Query: 79 EVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-----DVVSWNLVIGALVNCQRMDLA 133
+ D WN++I + +GL + + L+ D S +LV+ A C R+
Sbjct: 82 DFEDPFLWNAVIKSH-SHGLDPRKALLLFCLMLETGVSVDKFSLSLVLKA---CSRLGFV 137
Query: 134 ESYFKEMG-ARDVASWT------IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGY 186
+ + G R W+ ++ ++ G + AR++FD+MP +D ++N MI GY
Sbjct: 138 KEGMQIHGFLRKTGIWSDLYLQNCLIGLYIKCGCLGYARQVFDRMPRRDSVSYNSMIDGY 197
Query: 187 LDNGCVGVAEDLFQKM--HDRDLTSWKQLINGLVN-SRRIDAAISYFKQMPETCEKTWNS 243
+ G + A LF M ++L SW +I+G + ++ A F +MPE +WNS
Sbjct: 198 VKCGMIESARGLFDLMPKEKKNLISWNFMISGYAQRADGVNVAKKLFDEMPEKDLISWNS 257
Query: 244 IISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVW 303
+I +++G +++A S K P ++ +W ++ GY ++G V A +F+ M RDV +
Sbjct: 258 LIDGYVKHGRMEDAKSLFNKMPKRDVVTWATMVDGYAKLGFVHQAKSLFDRMPLRDVVAY 317
Query: 304 NVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAI 362
N MI G +N +E + F M KES SPD T VL+ + L L IH +
Sbjct: 318 NSMITGYVQNRYHKEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIH---L 374
Query: 363 KIARNQFT---TVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEK 419
I N+F + A+I Y++CG+IQ ++ F + I WN++I GLA HG E
Sbjct: 375 YIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGES 434
Query: 420 ALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVV 479
A ++ ++ KPDDITF+GVL+ACS++GLV +G F+ M+ K+ ++P+ HY C+V
Sbjct: 435 AFDMLLQIEKRSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMV 494
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN 539
D+L R G I+ A NL+ E+ IE + +W L AC H + GE+ + +
Sbjct: 495 DILSRSGSIELAKNLIEEM---PIEPNDVIWRTFLTACSNHKEFETGELVAKHLFLQGGY 551
Query: 540 NSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFL 591
N +++L+ MY S G ++ +R+ MKE ++K PGCSWI+++ H F
Sbjct: 552 NPSSFVLLSNMYASFGMWKEVRRVRTTMKERKLRKIPGCSWIELDGNVHEFF 603
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 210/422 (49%), Gaps = 36/422 (8%)
Query: 20 DTVTWNVMIRGYFKNGFLDNAMCLFNQMPE----RDMFTYNTVIAGLMQSDNVQGAKEVF 75
D + +++++ + GF+ M + + + D++ N +I ++ + A++VF
Sbjct: 120 DKFSLSLVLKACSRLGFVKEGMQIHGFLRKTGIWSDLYLQNCLIGLYIKCGCLGYARQVF 179
Query: 76 DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP--LKDVVSWNLVIGALVNCQRMD-- 131
D M RD V++NSMI GYV G+I+ A +F MP K+++SWN +I QR D
Sbjct: 180 DRMPRRDSVSYNSMIDGYVKCGMIESARGLFDLMPKEKKNLISWNFMISGYA--QRADGV 237
Query: 132 -LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
+A+ F EM +D+ SW +++G V+ GR+ +A+ LF+KMP +DV W M+ GY G
Sbjct: 238 NVAKKLFDEMPEKDLISWNSLIDGYVKHGRMEDAKSLFNKMPKRDVVTWATMVDGYAKLG 297
Query: 191 CVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC-----EKTWNSII 245
V A+ LF +M RD+ ++ +I G V +R AI F M + E T ++
Sbjct: 298 FVHQAKSLFDRMPLRDVVAYNSMITGYVQNRYHKEAIGIFNDMEKESHLSPDETTLVIVL 357
Query: 246 SVLIRNGLVKEA---HSYLEKYPYSNIASW-TNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
S + + G + +A H Y+ + +I Y + G + +++VFE + + +
Sbjct: 358 SAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSID 417
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD-------LPTLDLG 354
WN MI GL + LGE +Q+++ PD+ TF VL CS L +L
Sbjct: 418 HWNAMIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFIGVLNACSHSGLVKEGLLCFELM 477
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLA 412
R+ H K+ M+ + +R G+I+ A L+E + +D+I W + + +
Sbjct: 478 RRKHKIEPKLQH------YGCMVDILSRSGSIELAKNLIEEMPIEPNDVI-WRTFLTACS 530
Query: 413 YH 414
H
Sbjct: 531 NH 532
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 184/367 (50%), Gaps = 18/367 (4%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE--RDMFTYNTVIAGLMQ-S 65
A+ +FD+MP+RD+V++N MI GY K G +++A LF+ MP+ +++ ++N +I+G Q +
Sbjct: 175 ARQVFDRMPRRDSVSYNSMIDGYVKCGMIESARGLFDLMPKEKKNLISWNFMISGYAQRA 234
Query: 66 DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV 125
D V AK++FD M +D+++WNS+I GYV +G +++A +F+ MP +DVV+W ++
Sbjct: 235 DGVNVAKKLFDEMPEKDLISWNSLIDGYVKHGRMEDAKSLFNKMPKRDVVTWATMVDGYA 294
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP-----AKDVQAWN 180
+ A+S F M RDV ++ M+ G V+ EA +F+ M + D
Sbjct: 295 KLGFVHQAKSLFDRMPLRDVVAYNSMITGYVQNRYHKEAIGIFNDMEKESHLSPDETTLV 354
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSR----RIDAAISYFKQMPET 236
++++ G + A D+ + D +L L+++ I ++ F+++
Sbjct: 355 IVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENK 414
Query: 237 CEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYFEMGEVGSAIKVF 292
WN++I L +GL + A L + +I ++ V+ G V + F
Sbjct: 415 SIDHWNAMIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFIGVLNACSHSGLVKEGLLCF 474
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEG-LKFFVQMKESGP-SPDNATFTSVLTICSDLPT 350
ELM + + +G + L G ++ + E P P++ + + LT CS+
Sbjct: 475 ELMRRKHKIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSNHKE 534
Query: 351 LDLGRQI 357
+ G +
Sbjct: 535 FETGELV 541
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 160/312 (51%), Gaps = 32/312 (10%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
R + A+ LFD+MP++D ++WN +I GY K+G +++A LFN+MP+RD+ T+ T++ G
Sbjct: 233 RADGVNVAKKLFDEMPEKDLISWNSLIDGYVKHGRMEDAKSLFNKMPKRDVVTWATMVDG 292
Query: 62 LMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK-----DVVS 116
+ V AK +FD M +RDVV +NSMI+GYV N EA+ +F+ M + D +
Sbjct: 293 YAKLGFVHQAKSLFDRMPLRDVVAYNSMITGYVQNRYHKEAIGIFNDMEKESHLSPDETT 352
Query: 117 WNLVIGALVNCQRMDLA--------ESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
+V+ A+ R+ A ++ F+ G VA +++ + G I ++ ++F
Sbjct: 353 LVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVA----LIDTYSKCGSIQKSMRVF 408
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRID 224
+++ K + WN MI G +G A D+ ++ R D ++ ++N +S +
Sbjct: 409 EEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFIGVLNACSHSGLVK 468
Query: 225 AAISYFKQMP-----ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVG 278
+ F+ M E + + ++ +L R+G ++ A + +E+ P N W +
Sbjct: 469 EGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTA 528
Query: 279 -----YFEMGEV 285
FE GE+
Sbjct: 529 CSNHKEFETGEL 540
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 174/589 (29%), Positives = 300/589 (50%), Gaps = 58/589 (9%)
Query: 83 VVTWNSMISGYVCNGLIDEALRVF-HGMPLKDVVSWNLVIGALVNC---QRMDLAESYFK 138
+ +++S+I + + L F H PL+ + L+ A+ +C + +D +
Sbjct: 69 LFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHA 128
Query: 139 EMGARDVASWTIMVNGL----VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
A + +I+ + L ++ RI++ARKLFD+MP +DV W+ MIAGY G V
Sbjct: 129 FAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEE 188
Query: 195 AEDLFQKMH----DRDLTSWKQLINGLVNSRRIDAAISYFKQM------PE----TC--- 237
A++LF +M + +L SW ++ G N+ D A+ F+ M P+ +C
Sbjct: 189 AKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLP 248
Query: 238 --------------------------EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIAS 271
+ ++++ + + G VKE ++ I S
Sbjct: 249 AVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGS 308
Query: 272 WTNVIVGYFEMGEVGSAIKVFELMTTR----DVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
+ G G V +A++VF + +V W +I +N E L+ F M+
Sbjct: 309 LNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQ 368
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
G P+ T S++ C ++ L G++IH +++ V +A+I MYA+CG IQ
Sbjct: 369 AYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQ 428
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
A F + +++SWN+++ G A HG A++ +E+F M + KPD +TF VLSAC+
Sbjct: 429 LARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACA 488
Query: 448 YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
GL ++G ++ M ++ ++P+ HY C+V LL R G ++EA +++ E+ E
Sbjct: 489 QNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMP---FEPDA 545
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
VWGALL +CR+HNN+ +GEIA E++ LEP N G Y++L+ +Y S G ++ RI M
Sbjct: 546 CVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVM 605
Query: 568 KENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
K G++K PG SWI++ H+ L+GD SHP+ + L+ L+ ++++
Sbjct: 606 KSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKK 654
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 123/528 (23%), Positives = 224/528 (42%), Gaps = 84/528 (15%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++ RI +A+ LFD+MP RD V W+ MI GY + G ++ A LF
Sbjct: 150 LKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELF---------------- 193
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM------PLKDV 114
G M+S V+ ++V+WN M++G+ NG DEA+ +F M P
Sbjct: 194 GEMRSGGVE-----------PNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGST 242
Query: 115 VSWNL-VIGALVNCQRMDLAESYFKEMG-ARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
VS L +G L + Y + G D + M++ + G + E ++FD++
Sbjct: 243 VSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVE 302
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDR----DLTSWKQLINGLVNSRRIDAAIS 228
++ + N + G NG V A ++F K D+ ++ +W +I + + A+
Sbjct: 303 EMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALE 362
Query: 229 YFKQMPE-TCEKTWNSIISVLIRNGLV------KEAHSY-LEKYPYSNIASWTNVIVGYF 280
F+ M E +I S++ G + KE H + L + + ++ + +I Y
Sbjct: 363 LFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYA 422
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G + A + F+ M+ ++ WN ++ G + +E ++ F M +SG PD TFT
Sbjct: 423 KCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTC 482
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
VL+ C+ N + RC N S E P
Sbjct: 483 VLSACAQ--------------------------NGLTEEGWRCYNSMSE--EHGIEP--K 512
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
+ + ++ L+ G E+A + + M F+PD + +LS+C + G
Sbjct: 513 MEHYACLVTLLSRVGKLEEAYSIIKEM---PFEPDACVWGALLSSCRVHNNLSLGEI--- 566
Query: 461 CMKNKYFLQPRS-AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
+ +FL+P + +Y + ++ GL DE + +++ G+ +P
Sbjct: 567 AAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNP 614
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 201/662 (30%), Positives = 313/662 (47%), Gaps = 78/662 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTYN-TV 58
+ A LF++M +RD V+WN I ++G LD A+ LF +M P R +V
Sbjct: 179 VASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSV 237
Query: 59 IAGLMQSDNVQG-----------------------------AKEVFDGMEVRDVVTWNSM 89
A + Q+ + AKEVFD RDVV+WN+M
Sbjct: 238 CAKIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAM 297
Query: 90 ISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLVIG-ALVNCQRMDLAESYFKEMGAR 143
+ Y +G + EA +F G+P V N G + + RM A + K + R
Sbjct: 298 LGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRFGRMIHACALEKGLD-R 356
Query: 144 DVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH 203
D+ +++ R G EAR LF+ +P V +WN MIAG G + A +LFQ+M
Sbjct: 357 DIVLGNALLDMYTRCGSPEEARHLFEGIPGNAV-SWNTMIAGSSQKGQMKRALELFQRMQ 415
Query: 204 DRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEK 263
+ + L+ + + + + M E ++ HS +
Sbjct: 416 LEGMAPVRATYLNLLEA--VASNPEEARAMAEG------------------RKLHSRIVS 455
Query: 264 YPY-SNIASWTNVIVGYFEMGEVGSAIKVFE---LMTTRDVTVWNVMIFGLGENDLGEEG 319
Y S A T V+ Y G + A F+ + DV WN +I L ++ G+
Sbjct: 456 CGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRA 515
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITM 379
L FF +M G +P+ T +VL C+ L G +H V+ A+ +M
Sbjct: 516 LGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASM 575
Query: 380 YARCGNIQSALLEFSSVPI-HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
Y RCG+++SA F V + D++ +N++I + +G A +AL+LF RM+ +PD+ +
Sbjct: 576 YGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQS 635
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
FV VLSACS+ GL D+G F M+ Y + P HY C VD+LGR G + +A L+
Sbjct: 636 FVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIR-- 693
Query: 499 RADGIEVSPTV--WGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGR 556
++V PTV W LLGACR + ++ G +A V EL+P + Y++L+ + G+
Sbjct: 694 ---CMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGK 750
Query: 557 REDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIER 616
++A + +M+ G++K+ G SWI+I H F++GD SHP+ + L LH EI R
Sbjct: 751 WDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEI-R 809
Query: 617 EI 618
EI
Sbjct: 810 EI 811
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 209/444 (47%), Gaps = 50/444 (11%)
Query: 63 MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWN 118
++ +++ +EVF +EVRD +W ++I+ Y +G A+ +FH M + D V++
Sbjct: 73 LKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFL 132
Query: 119 LVIGALVNCQRM-DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
V+ A C R+ DL++ R + +W I+ +GL EG+ V A
Sbjct: 133 AVLKA---CARLGDLSQ-------GRSIHAW-IVESGL--EGKSVLA------------- 166
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP--- 234
NL++ Y GCV A LF++M +RDL SW I S +D A+ F++M
Sbjct: 167 --NLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEG 223
Query: 235 -ETCEKTWNSIISVLIRNGLVKEAHSYL-EKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
T +SV + + HS + E + T + Y +G + A +VF
Sbjct: 224 VRPARITLVITLSVCAKIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVF 283
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
+ RDV WN M+ ++ E F +M G P T + T CS +L
Sbjct: 284 DRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCS---SLR 340
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
GR IHA A++ ++ + NA++ MY RCG+ + A F +P + +SWN++I G +
Sbjct: 341 FGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWNTMIAGSS 399
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY----AGLVDQGR-YYFDCMKNKYF 467
G ++ALELF+RM+L P T++ +L A + A + +GR + + Y
Sbjct: 400 QKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYA 459
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEA 491
+P A T VV + G IDEA
Sbjct: 460 SEP--AIGTAVVKMYASCGAIDEA 481
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 133/584 (22%), Positives = 235/584 (40%), Gaps = 134/584 (22%)
Query: 25 NVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME---VR 81
N ++R Y K L + +F+++ RD ++ T+I + + A +F M+ VR
Sbjct: 66 NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVR 125
Query: 82 -DVVTW-----------------------------------NSMISGYVCNGLIDEALRV 105
D VT+ N ++ Y G + A+ +
Sbjct: 126 CDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLL 185
Query: 106 FHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEM-----------------------GA 142
F M +D+VSWN I A +D+A F+ M A
Sbjct: 186 FERME-RDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQA 244
Query: 143 RDVAS-------------WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
R + S T + + R G + +A+++FD+ +DV +WN M+ Y +
Sbjct: 245 RAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQH 304
Query: 190 GCVGVAEDLFQKM-HDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC--EKTW----- 241
G + A LF +M H+ S L+N + F +M C EK
Sbjct: 305 GHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSL-----RFGRMIHACALEKGLDRDIV 359
Query: 242 --NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRD 299
N+++ + R G +EA E P N SW +I G + G++ A+++F+
Sbjct: 360 LGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQ------ 412
Query: 300 VTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLP----TLDLGR 355
+M+ G +P AT+ ++L + P + GR
Sbjct: 413 -------------------------RMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGR 447
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI---HDIISWNSIICGLA 412
++H++ + + A++ MYA CG I A F + HD++SWN+II L+
Sbjct: 448 KLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLS 507
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRS 472
HG+ ++AL F RM L P+ IT V VL AC+ A + +G D +++ ++
Sbjct: 508 QHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHS-GMESNV 566
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGA 516
T + + GR G ++ A + ++ +E ++ A++ A
Sbjct: 567 FVATALASMYGRCGSLESAREIFEKV---AVERDVVIFNAMIAA 607
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 134/535 (25%), Positives = 224/535 (41%), Gaps = 73/535 (13%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PERDMFTY 55
R + +A+ +FD+ +RD V+WN M+ Y ++G + A LF +M P +
Sbjct: 272 RLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVN 331
Query: 56 NTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVV 115
+ ++ + A + G++ RD+V N+++ Y G +EA +F G+P + V
Sbjct: 332 ASTGCSSLRFGRMIHACALEKGLD-RDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAV 389
Query: 116 SWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV-------REGR-IVEARKL 167
SWN +I +M A F+ M +A L+ E R + E RKL
Sbjct: 390 SWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKL 449
Query: 168 FDKMP----AKDVQAWNLMIAGYLDNGCVGVAEDLFQK--MHDR-DLTSWKQLINGLVNS 220
++ A + ++ Y G + A FQ+ M DR D+ SW +I+ L
Sbjct: 450 HSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQH 509
Query: 221 RRIDAAISYFKQM------PE--TCEKTWNSII-SVLIRNGLVKEAHSYLEKYPY-SNIA 270
A+ +F++M P TC ++ + + G++ H +L SN+
Sbjct: 510 GHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVI--VHDHLRHSGMESNVF 567
Query: 271 SWTNVIVGYFEMGEVGSAIKVFE-LMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
T + Y G + SA ++FE + RDV ++N MI +N L E LK F +M++
Sbjct: 568 VATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQE 627
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
G PD +F SVL+ CS D G +I +S
Sbjct: 628 GSRPDEQSFVSVLSACSHGGLADEGWEI----------------------------FRSM 659
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
+ P D + + G A G+ A EL +R D KP + + +L AC
Sbjct: 660 RQSYGIAPSEDHYACAVDVLGRA--GWLADAEEL---IRCMDVKPTVLVWKTLLGACRKY 714
Query: 450 GLVDQGRYYFDCMKNKYFLQP-RSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGI 503
VD+GR ++ L P + Y + ++L G DEA + E+ + G+
Sbjct: 715 RDVDRGRLANSMVRE---LDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGL 766
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 136/327 (41%), Gaps = 42/327 (12%)
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + +G +VF + RD W +I E+ + + F +M++ G D TF
Sbjct: 72 YLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTF 131
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+VL C+ L L GR IHA ++ + ++N ++ +Y CG + SA+L F +
Sbjct: 132 LAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME- 190
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYY 458
D++SWN+ I A G + ALELF+RM+L +P IT V LS C+ + Q R
Sbjct: 191 RDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAK---IRQARAI 247
Query: 459 FDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACR 518
++ Q T + R G +D+A + + E W A+LGA
Sbjct: 248 HSIVRESGLEQTLVV-STALASAYARLGHLDQAKEVFDR----AAERDVVSWNAMLGAYA 302
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLI-------------------------------- 546
H ++ + R++ S V L+
Sbjct: 303 QHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGN 362
Query: 547 -LTEMYLSCGRREDAKRIFAQMKENGV 572
L +MY CG E+A+ +F + N V
Sbjct: 363 ALLDMYTRCGSPEEARHLFEGIPGNAV 389
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 117/248 (47%), Gaps = 14/248 (5%)
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
S + A +L D L GR+IHA+ + + + + N ++ +Y +C ++
Sbjct: 23 SSGATRPAHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEE--ELGNHLLRLYLKCESLGD 80
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
FS + + D SW +II HG A++A+ +F RM+ + D +TF+ VL AC+
Sbjct: 81 VEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACAR 140
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
G + QGR + L+ +S ++ + G G + AM L + D +
Sbjct: 141 LGDLSQGRSIHAWIVES-GLEGKSVLANLLLHIYGSCGCVASAMLLFERMERDLVS---- 195
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEP-NNSGVYLILTEMYLS-CGRREDAKRIFAQ 566
W A + A ++ + +R M+LE + + L++T LS C + A+ I +
Sbjct: 196 -WNAAIAANAQSGDLDMALELFQR-MQLEGVRPARITLVIT---LSVCAKIRQARAIHSI 250
Query: 567 MKENGVKK 574
++E+G+++
Sbjct: 251 VRESGLEQ 258
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 175/570 (30%), Positives = 285/570 (50%), Gaps = 40/570 (7%)
Query: 39 NAMCLFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGL 98
+A+ + N + + + +I + + A+++FD M RDV WN++I GY G
Sbjct: 49 HALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGP 108
Query: 99 IDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVRE 158
+EAL ++ M + N +V + V +RE
Sbjct: 109 CEEALALYSNMHGAGLFPDNYTFPFVVR----------------------SCAVLSALRE 146
Query: 159 GRIVEA---RKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLIN 215
G+ V + FD DV + ++A Y +G E +F +M R++ SW +I
Sbjct: 147 GKEVHCNIVKHGFD----SDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIA 202
Query: 216 GLVNSRRIDAAISYFKQMPET-CEKTWNSIISVLIRNG------LVKEAHSYLEKYPYSN 268
G V +R + F++M + + +++SVL L K H Y K
Sbjct: 203 GYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDP 262
Query: 269 IASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
S TN ++ Y + G V +A +F+ M +++ WN MI +N+ G +K F +M+
Sbjct: 263 DVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQ 322
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
D T SV++ C+ L L+ GR +H + +++NA+I MYA+CGNI
Sbjct: 323 AEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNID 382
Query: 388 SALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS 447
A F +P ++SW S+I A HG+ E AL+LF RM+ KP+ TF V +AC
Sbjct: 383 LAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACR 442
Query: 448 YAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP 507
++GLV++GR +F+ M Y + P H C+VDLLGR G + EA ++++ +E
Sbjct: 443 HSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMP---VEPDV 499
Query: 508 TVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQM 567
+VWGALLG+CRIH+N+++ E+ E++ L+P Y++++ +Y GR EDA R+ M
Sbjct: 500 SVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLM 559
Query: 568 KENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
+E +KK PG S +++N H FLSG S
Sbjct: 560 EERELKKIPGHSLVEVNRRFHTFLSGSRSQ 589
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 210/490 (42%), Gaps = 84/490 (17%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP-------------------- 48
A+ +FD+MP+RD WN +IRGY G + A+ L++ M
Sbjct: 81 ARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAV 140
Query: 49 -------------------ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
+ D+F ++++A QS G + VF M VR++V+W ++
Sbjct: 141 LSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAV 200
Query: 90 ISGYVCNGLIDEALRVFHGM----PLKDVVSWNLVIGALVNCQRMDLAE---SYFKEMGA 142
I+GYV N E L VF M + V+ V+ A + ++L + Y ++G
Sbjct: 201 IAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGV 260
Query: 143 -RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQK 201
DV+ ++ + G + AR LFD M +++ +WN MIA Y N A LF++
Sbjct: 261 DPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRR 320
Query: 202 MHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA---H 258
M + ++D Y T S+IS G + H
Sbjct: 321 MQ----------------AEKVD--FDYI---------TMVSVISACASLGALNTGRWMH 353
Query: 259 SYLEKYPYSNIASWTNVIVGYF-EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
+++ S TN ++ + + G + A +VFE + R V W MI + GE
Sbjct: 354 ELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGE 413
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--A 375
+ LK F +MK+ G P++ TF +V T C ++ GR+ H +++ + V +
Sbjct: 414 DALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRK-HFESMMRDYSIMPGVEHCAC 472
Query: 376 MITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
M+ + R G++ A +P+ D+ W +++ H E A + E++ L D P
Sbjct: 473 MVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLD--P 530
Query: 435 DDITFVGVLS 444
+TF ++S
Sbjct: 531 QTVTFYVLMS 540
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 51/247 (20%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-PERDMFTYNTVIA---- 60
++ A++LFD M ++ V+WN MI Y +N NA+ LF +M E+ F Y T+++
Sbjct: 280 VETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISA 339
Query: 61 --------------------GL--------------MQSDNVQGAKEVFDGMEVRDVVTW 86
GL + N+ A+EVF+ + R VV+W
Sbjct: 340 CASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSW 399
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDLAE---SYFKEMGA 142
SMI +G ++AL++F M + V + A+ C+ L E +F+ M
Sbjct: 400 TSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESM-M 458
Query: 143 RD------VASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGCVGVA 195
RD V MV+ L R G ++EA + DKMP + DV W ++ + + +A
Sbjct: 459 RDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELA 518
Query: 196 EDLFQKM 202
E + +K+
Sbjct: 519 ELVAEKL 525
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 187/661 (28%), Positives = 319/661 (48%), Gaps = 73/661 (11%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM------FTY 55
R + EA +F+ + ++ V + M++G+ K LD A+ F +M + ++ FTY
Sbjct: 81 RYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTY 140
Query: 56 NTVIAG--------------LMQSD-------------------NVQGAKEVFDGMEVRD 82
+ G L++S V A++VFD M RD
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERD 200
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDV-VSWNLVIGALVNCQRMDLA------ES 135
+V+WN++++GY NG+ AL + + M +++ S+ ++ L + L
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHG 260
Query: 136 YFKEMGARDVAS-WTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGV 194
Y G + + T +V+ + G + AR LFD M ++V +WN MI Y+ N
Sbjct: 261 YAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLV 254
A +FQKM D + + G +++ C + L R +
Sbjct: 321 AMVIFQKMLDEGVKPTDVSVMGALHA----------------CADLGD-----LERGRFI 359
Query: 255 KEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEND 314
+ LE N++ ++I Y + EV +A +F + +R + WN MI G +N
Sbjct: 360 HKLSVELELD--RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNG 417
Query: 315 LGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN 374
E L +F QM+ PD T+ SV+T ++L + IH ++ ++ V+
Sbjct: 418 RPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTT 477
Query: 375 AMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP 434
A++ MYA+CG I A L F + + +WN++I G HG + ALELFE M+ +P
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRP 537
Query: 435 DDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
+ +TF+ V+SACS++GLV+ G F MK Y ++P HY +VDLLGR G ++EA +
Sbjct: 538 NGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDF 597
Query: 495 LNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSC 554
+ ++ ++ + V+GA+LGAC+IH N+ E ER+ EL P + G +++L +Y +
Sbjct: 598 IMQM---PVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAA 654
Query: 555 GRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEI 614
E ++ M G++K PGCS ++I + H F SG ++HP ++ L L +I
Sbjct: 655 SMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQI 714
Query: 615 E 615
+
Sbjct: 715 K 715
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 159/380 (41%), Gaps = 63/380 (16%)
Query: 235 ETCE--KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVF 292
E C K I+ ++ +NGL +E H + T ++ + G V A +VF
Sbjct: 45 ERCSSLKELRHILPLIFKNGLYQE-HLF-----------QTKLVSLFCRYGSVDEAARVF 92
Query: 293 ELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
E + + ++ M+ G + ++ LKFFV+M++ P FT +L +C D L
Sbjct: 93 EPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELR 152
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
+G++IH +K + + MYA+C + A F +P D++SWN+I+ G +
Sbjct: 153 VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYS 212
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG--------RYYFDCMKN 464
+G A ALE+ M + KP IT V VL A S L+ G R FD + N
Sbjct: 213 QNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVN 272
Query: 465 KYFLQPRSAHYTCVVDLLGRFG----------------------LID---------EAMN 493
T +VD+ + G +ID EAM
Sbjct: 273 I---------ATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMV 323
Query: 494 LLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPN-NSGVYLILTEMYL 552
+ ++ +G++ + L AC +++ G + +ELE + N V L MY
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYC 383
Query: 553 SCGRREDAKRIFAQMKENGV 572
C + A +F +++ +
Sbjct: 384 KCKEVDTAASMFGKLQSRTI 403
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 177/621 (28%), Positives = 309/621 (49%), Gaps = 35/621 (5%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVIAG 61
I+EA +FD M +RDT++WN +I NG + ++ F+QM + D T + ++
Sbjct: 211 IEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPV 270
Query: 62 LMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+ N++ + + GM V+ +V NS++S Y G ++A VFH M +D++S
Sbjct: 271 CGSAQNLRWGRGL-HGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLIS 329
Query: 117 WNLVIGALVNCQRMDLAESYFKEM-GARDVASWTIMVNGL-----VREGRIVEARKLFDK 170
WN ++ + V+ A EM R ++ L + +IV A +
Sbjct: 330 WNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKIVHAFVILLG 389
Query: 171 MPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYF 230
+ ++ N ++ Y G + A+ + + M DRD +W LI G +++ +AAI F
Sbjct: 390 LH-HNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAF 448
Query: 231 KQM-PETCEKTWNSIISVL---------IRNGLVKEAHSYLEKYPYSNIASWTNVIVGYF 280
+ E + +I+++L + +G+ AH + + +++I Y
Sbjct: 449 NLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQ-SSLITMYA 507
Query: 281 EMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTS 340
+ G++ ++ +F+++ ++ + WN ++ GEE LK ++M+ G D +F+
Sbjct: 508 QCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSV 567
Query: 341 VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD 400
I +L LD G+Q+H+ IK V NA + MY +CG I
Sbjct: 568 AHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRS 627
Query: 401 IISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD 460
SWN +I LA HG+ ++A E F M +PD +TFV +LSACS+ GLVD+G YF
Sbjct: 628 QRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFS 687
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLGACR 518
M K+ + H C++DLLGR G + EA N +N+ + V PT VW +LL AC+
Sbjct: 688 SMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINK-----MPVPPTDLVWRSLLAACK 742
Query: 519 IHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGC 578
IH N+++ A +R+ EL+ ++ Y++ + + S R D + + QM+ + +KK+P C
Sbjct: 743 IHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPAC 802
Query: 579 SWIQINDGGHVFLSGDSSHPK 599
SW+++ + F GD HP+
Sbjct: 803 SWVKLKNQVTTFGMGDQYHPQ 823
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 164/680 (24%), Positives = 278/680 (40%), Gaps = 120/680 (17%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA----- 60
I+ AQ++FDKMP+R+ +WN ++ G+ + G+ AM F M E + + V A
Sbjct: 8 IEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLVTA 67
Query: 61 ----GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
G M Q V DV S++ Y G + E VF + ++VS
Sbjct: 68 CDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVS 127
Query: 117 W-NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA-- 173
W +L++G N ++ Y R + + N I L DKM
Sbjct: 128 WTSLMVGYAYNGCVKEVMSVY------RRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQ 181
Query: 174 -----------KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
V N +I+ + + + A +F M +RD SW +I V++
Sbjct: 182 VLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGH 241
Query: 223 IDAAISYFKQMPETCEKTWNSIISVLIR--------------NGLVKEAHSYLEKYPYSN 268
+ ++ YF QM T KT IS L+ +G+V + S LE SN
Sbjct: 242 CEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVK--SGLE----SN 295
Query: 269 IASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE 328
+ +++ Y + G+ A VF M RD+ WN M+ +N L+ ++M +
Sbjct: 296 VCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQ 355
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
+ + + TFT+ L+ C +L TL + +HA I + + + NA++TMY + G++ +
Sbjct: 356 TRKATNYVTFTTALSACYNLETLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAA 412
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSA-CS 447
A +P D ++WN++I G A + A+E F +R + IT V +LSA S
Sbjct: 413 AQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLS 472
Query: 448 YAGLVDQG-----------------------------------RYYFDCMKNKYFLQPRS 472
L+D G Y FD + NK S
Sbjct: 473 PDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANK-----NS 527
Query: 473 AHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV---SPTVWGALLGACRIHNNIKVGEIA 529
+ + ++ +G +EA+ L+ ++R DGI + S +V A++G + +
Sbjct: 528 STWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDE------- 580
Query: 530 GERVMEL-----EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQIN 584
G+++ L +N V +MY CG +D RI Q + + SW
Sbjct: 581 GQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQR-----SW---- 631
Query: 585 DGGHVFLSGDSSHPKFHRLR 604
++ +S + H F + R
Sbjct: 632 ---NILISALARHGFFQQAR 648
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 133/280 (47%), Gaps = 9/280 (3%)
Query: 186 YLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSII 245
Y G + A+ +F KM +R+ SW L++G V A+ +F M E + + +
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61
Query: 246 SVLI----RNGLVKEA----HSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMT 296
+ L+ R+G + E H+++ K + ++ T+++ Y G V VF+ +
Sbjct: 62 ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ 356
++ W ++ G N +E + + +++ G + +V+ C L LG Q
Sbjct: 122 EPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQ 181
Query: 357 IHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGY 416
+ IK + +V+N++I+M+ C +I+ A F + D ISWNSII ++G+
Sbjct: 182 VLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGH 241
Query: 417 AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGR 456
EK+LE F +MR T K D IT +L C A + GR
Sbjct: 242 CEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGR 281
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 88/223 (39%), Gaps = 32/223 (14%)
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
MY++ G+I+ A F +P + SWN+++ G G+ +KA++ F M +P
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 439 FVGVLSACSYAGLVDQGRYYFDC-------------------------------MKNKYF 467
+++AC +G + +G + M K
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 468 LQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG- 526
+P +T ++ G + E M++ +R DG+ + ++ +C + + +G
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKE 569
++ G + V L M+ +C E+A +F MKE
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKE 223
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 182/659 (27%), Positives = 315/659 (47%), Gaps = 73/659 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI-- 59
+ A+ LFD+MP+R+ V++ +++ + + G + A LF ++ E + F T++
Sbjct: 112 LASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKL 171
Query: 60 -----------------------------AGLMQSDN----VQGAKEVFDGMEVRDVVTW 86
+GL+ + + V A+ VF+G+ +D V W
Sbjct: 172 AIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVW 231
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESY----FK 138
+M+S Y N + A RVF M + + + V+ A V + L + K
Sbjct: 232 TAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIK 291
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+ + +++ + G I +AR F+ +P DV + MI+ Y + A +L
Sbjct: 292 TLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFEL 351
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
F ++ + + ++ ++ + + + KQ I N +K H
Sbjct: 352 FLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQ----------------IHNHAIKIGH 395
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
S++ ++ Y + ++ S++K+F + + WN ++ G ++ LGEE
Sbjct: 396 E-------SDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEE 448
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L F +M+ + T++SVL C+ ++ QIH K N T + N++I
Sbjct: 449 ALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLID 508
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
YA+CG I+ AL F + DIISWN+II G A HG A ALELF+RM ++ + +DIT
Sbjct: 509 TYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDIT 568
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
FV +LS CS GLV+ G FD M+ + ++P HYTC+V LLGR G +++A+ + +I
Sbjct: 569 FVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDI 628
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
+ S VW ALL +C IH N+ +G + E+++E+EP + Y++L+ MY + G +
Sbjct: 629 PS---APSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLD 685
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
+ M+ GV+K PG SW++I H F G HP + +L L+ + RE
Sbjct: 686 QVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSRE 744
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 204/480 (42%), Gaps = 63/480 (13%)
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
+G D+ +++N + G + AR+LFD+MP +++ ++ ++ + G A LF
Sbjct: 91 VGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALF 150
Query: 200 QKMHDRDLTSWK-QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
+++ W+ +N V + + AI+ + GL H
Sbjct: 151 RRLR------WEGHEVNQFVLTTMLKLAIA-------------------MDAAGLAGGVH 185
Query: 259 SYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
S K + N + +I Y V A VF + +D VW M+ END E
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
+ F +M+ SG P+ TSVL LP++ LG+ IH AIK + V A++
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
MYA+CG+I+ A L F +P D+I + +I A E+A ELF R+ + P++
Sbjct: 306 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEY 365
Query: 438 TFVGVLSACSYAGLVDQGR-----------------------YYFDC----MKNKYFLQP 470
+ VL AC+ +D G+ +Y C K F
Sbjct: 366 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425
Query: 471 RSAH---YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK-VG 526
R A+ + +V + GL +EA+++ E++A + + + ++L AC +I+ G
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 485
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
+I N++ + L + Y CG DA ++F + E + SW I G
Sbjct: 486 QIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDI-----ISWNAIISG 540
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 214/483 (44%), Gaps = 46/483 (9%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D+F N ++ + + A+ +FD M R++V++ +++ + G + A +F +
Sbjct: 95 DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIM--VNGLVREGRI------- 161
+ V+ ++ ++ +A G +W + N V G I
Sbjct: 155 WEGHEVNQFVLTTML---KLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCS 211
Query: 162 --VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
+A +F+ + KD W M++ Y +N C A +F KM ++ K N
Sbjct: 212 LVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMR---VSGCKP--NPFAL 266
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL-EKYPYSNIASWTNVIVG 278
+ + AA+ +P SV++ G+ A L + P+ A ++
Sbjct: 267 TSVLKAAVC----LP-----------SVVLGKGIHGCAIKTLNDTEPHVGGA----LLDM 307
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G++ A FE++ DV + + MI +++ E+ + F+++ S P+ +
Sbjct: 308 YAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSL 367
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+SVL C+++ LD G+QIH AIKI V NA++ YA+C ++ S+L FSS+
Sbjct: 368 SSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRD 427
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC-SYAGLVDQGRY 457
+ +SWN+I+ G + G E+AL +F M+ +T+ VL AC S A + G+
Sbjct: 428 ANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQI 487
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ C K + ++D + G I +A+ + + +E W A++
Sbjct: 488 H--CSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL----MERDIISWNAIISGY 541
Query: 518 RIH 520
+H
Sbjct: 542 ALH 544
>gi|413948598|gb|AFW81247.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 788
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 200/648 (30%), Positives = 304/648 (46%), Gaps = 60/648 (9%)
Query: 16 MPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PE--RDMFTYNTVIAGLMQSDN 67
MP+RD V + ++ GY AM LF++ P D F + V+ +
Sbjct: 1 MPRRDEVAYATLLSGYAAAADFPGAMALFSRFRASSSQPHDAADPFILSPVLKACASAAA 60
Query: 68 VQGAKE-------------VFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDV 114
G + V ++ Y G +D AL+V MP ++V
Sbjct: 61 SAGLLPLPHAAAAAALHAFAVRSSSLPSVFVSTALADAYAKAGRLDLALQVLDEMPSRNV 120
Query: 115 VSWNLVIGALVNCQRMDLAESYFKEMGARDVA--------SWTIMVN-GLVREGRIVEA- 164
VSW ++ +L R A F EM A VA + T + GL+ GR V A
Sbjct: 121 VSWTTLVASLARAGRRHDALRRFAEMRASGVACDSHACSAALTACADAGLLPRGREVHAL 180
Query: 165 -RKL-FDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRR 222
KL D +P N + A Y G V A +M D+ LI V + R
Sbjct: 181 CAKLGLDAVPF----VANALAALYARCGDVDRALAAVGRMGSHDVAVCTTLIASYVQTGR 236
Query: 223 IDAAISYFKQM--------PETCEKTWNSIISV---LIRNGLVKEAHSYLEKYPYSNIAS 271
+ AI F +M E T++++I+ + R L ++ H+ + S+ S
Sbjct: 237 TEEAIEAFVRMLRDESSNSASPNEYTFSAVIAACPNMDRAYLGEQLHAQAARRGLSHARS 296
Query: 272 WTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKE-- 328
N +V Y G + +A +F +DV W+ +I G + L EE F +M+
Sbjct: 297 VANSLVKLYSRRGHLSAADAIFRESVVKDVVSWSTIISGYTQEGLAEESFALFSEMRHHS 356
Query: 329 SGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQS 388
S P P+ T S+ ++C+ +LD GRQ+HA A+ V +A++ MY + G++
Sbjct: 357 SCPRPNEFTLASLFSVCASAASLDTGRQLHALAVAAGLEHHAMVRSALVNMYGKGGSMSD 416
Query: 389 ALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSY 448
A + FS+ D+ISW ++I G A HG++++A ELFE M KPD +TF+GVL+ACS+
Sbjct: 417 ANVVFSNRTKDDVISWTAMIVGHAEHGHSKEAFELFEEMCRIGLKPDHVTFIGVLTACSH 476
Query: 449 AGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPT 508
AG ++ G Y + M Y L+P HY CVVDLL R G I EA L+ I A+ E
Sbjct: 477 AGELELGLRYLNAMNKSYGLEPEKEHYGCVVDLLARAGRIHEAEELIGRIAAE--ERDGV 534
Query: 509 VWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
VW +LL AC + G+IA ER+ME EP SG ++++ +Y S G +A + MK
Sbjct: 535 VWTSLLRACAARGAEETGKIAAERMMEAEPWGSGAHVVMANLYASKGLWCEAAQERHLMK 594
Query: 569 ENGVKKEPGCSWIQINDGGH-----VFLSGDSSHPKFHRLRYLLNLLH 611
+ GV K G W + GG VF+SGD ++P+ + +L L++
Sbjct: 595 QKGVLK--GAGWSSVEVGGDDRGVGVFVSGDRTNPQDSAIYMMLELMY 640
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 176/485 (36%), Gaps = 85/485 (17%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM--------- 52
+ R+ A + D+MP R+ V+W ++ + G +A+ F +M +
Sbjct: 101 KAGRLDLALQVLDEMPSRNVVSWTTLVASLARAGRRHDALRRFAEMRASGVACDSHACSA 160
Query: 53 ------------------------------FTYNTVIAGLMQSDNVQGAKEVFDGMEVRD 82
F N + A + +V A M D
Sbjct: 161 ALTACADAGLLPRGREVHALCAKLGLDAVPFVANALAALYARCGDVDRALAAVGRMGSHD 220
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS---------WNLVIGALVNCQRMDLA 133
V ++I+ YV G +EA+ F M L+D S ++ VI A N R L
Sbjct: 221 VAVCTTLIASYVQTGRTEEAIEAFVRM-LRDESSNSASPNEYTFSAVIAACPNMDRAYLG 279
Query: 134 ESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLFDKMPAKDVQAWNLMIAGYLDN 189
E + R ++ + N LV R G + A +F + KDV +W+ +I+GY
Sbjct: 280 EQLHAQAARRGLSHARSVANSLVKLYSRRGHLSAADAIFRESVVKDVVSWSTIISGYTQE 339
Query: 190 GCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLI 249
G + LF +M + P E T S+ SV
Sbjct: 340 GLAEESFALFSEMR-------------------------HHSSCPRPNEFTLASLFSVCA 374
Query: 250 RNGLV---KEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNV 305
+ ++ H+ + A + +V Y + G + A VF T DV W
Sbjct: 375 SAASLDTGRQLHALAVAAGLEHHAMVRSALVNMYGKGGSMSDANVVFSNRTKDDVISWTA 434
Query: 306 MIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG-RQIHAQAIKI 364
MI G E+ +E + F +M G PD+ TF VLT CS L+LG R ++A
Sbjct: 435 MIVGHAEHGHSKEAFELFEEMCRIGLKPDHVTFIGVLTACSHAGELELGLRYLNAMNKSY 494
Query: 365 ARNQFTTVSNAMITMYARCGNIQSA--LLEFSSVPIHDIISWNSIICGLAYHGYAEKALE 422
++ + AR G I A L+ + D + W S++ A G E
Sbjct: 495 GLEPEKEHYGCVVDLLARAGRIHEAEELIGRIAAEERDGVVWTSLLRACAARGAEETGKI 554
Query: 423 LFERM 427
ERM
Sbjct: 555 AAERM 559
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 197/651 (30%), Positives = 323/651 (49%), Gaps = 56/651 (8%)
Query: 2 RNARIQEAQNLFDKMPQ-RDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
R + A+N+FD M RD V+W M +NG ++ L +M E + +
Sbjct: 96 RCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLESGLLPNAYTLC 155
Query: 61 GLMQS----------DNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
+ + V G+ D+ +++I NG + A +VF G+
Sbjct: 156 AVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLI 215
Query: 111 LKDVVSWNLVIGALVN--CQR------MDLAESYFKEMGARDVASWTIMVNGLVREGRIV 162
K VV W L+I V C +D E F+ D + + M++ G +
Sbjct: 216 EKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEP----DRYTMSSMISACTELGSVR 271
Query: 163 EARKLFDKMPAKDVQAWNLMIAGYLD-------NGCVGVAEDLFQKMHDRDLTSWKQLIN 215
+L + + G +D + A +F++M D+ SW LI+
Sbjct: 272 LGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALIS 331
Query: 216 GLVNSR-RIDAAISYFKQMPETCEK----TWNSIISV---LIRNGLVKEAHSYLEKYPYS 267
G V S + + + F +M K T++SI+ + + ++ H+++ K +
Sbjct: 332 GYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQA 391
Query: 268 NIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQM 326
+ N +V Y E G + A +VF + R MI + E + L +
Sbjct: 392 AAHTVGNALVSMYAESGCMEEARRVFNQLYERS------MISCITEGR--DAPLDHRIGR 443
Query: 327 KESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNI 386
+ G S ++TF S+++ + + L G+Q+HA +K VSN++++MY+RCG +
Sbjct: 444 MDMGIS--SSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYL 501
Query: 387 QSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
+ A F+ + ++ISW S+I GLA HGYAE+AL LF M LT KP+D+T++ VLSAC
Sbjct: 502 EDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSAC 561
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE--IRADGIE 504
S+ GLV +G+ YF M+ + L PR HY C+VDLL R GL+ EA+ +NE ++AD +
Sbjct: 562 SHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADAL- 620
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
VW LLGACR H+NI+VGEIA + V+ELEP + Y++L+ +Y G ++ RI
Sbjct: 621 ----VWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIR 676
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIE 615
+ M++N + KE G SW+++ + H F +GD+SHP+ + L+ L EI+
Sbjct: 677 SAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIK 727
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/519 (22%), Positives = 218/519 (42%), Gaps = 76/519 (14%)
Query: 43 LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGME-VRDVVTWNSMISGYVCNGLIDE 101
L + +RD N+++ + V A+ VFDGM +RD+V+W +M S NG E
Sbjct: 75 LRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERE 134
Query: 102 ALRVFHGMPLKDVVSWNLVIGALVN--------CQRMDLAESYFKEMG--ARDVASWTIM 151
+L + M ++ + A+ + C + +MG D+A + +
Sbjct: 135 SLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSAL 194
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
++ L R G + ARK+FD + K V W L+I+ Y+ C A ++F
Sbjct: 195 IDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIF------------ 242
Query: 212 QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVK---EAHSYLEKYPYSN 268
+ + + E T +S+IS G V+ + HS + +++
Sbjct: 243 ---------------LDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFAS 287
Query: 269 IASWTNVIVGYFEMGEVGSAI----KVFELMTTRDVTVWNVMIFGLGENDLGEEG-LKFF 323
A + +V + + A+ KVFE M DV W +I G ++ + E + F
Sbjct: 288 DACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLF 347
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARC 383
+M P++ T++S+L C+++ D GRQ+HA IK + TV NA+++MYA
Sbjct: 348 GEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAES 407
Query: 384 GNIQSALLEFSSVPIHDIIS-------------------------WNSIICGLAYHGYAE 418
G ++ A F+ + +IS + S+I A G
Sbjct: 408 GCMEEARRVFNQLYERSMISCITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLT 467
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
K +L F D ++S S G ++ F+ +K++ + +T +
Sbjct: 468 KGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVIS-----WTSM 522
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ L + G + A++L +++ G++ + + A+L AC
Sbjct: 523 ISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSAC 561
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 351 LDLGRQIHAQAIK-IARNQFTTVSNAMITMYARCGNIQSALLEFSSVP-IHDIISWNSII 408
L LGR +H + ++ ++ V+N+++T+Y+RCG + SA F + + DI+SW ++
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
LA +G ++L L M + P+ T V AC
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHAC 161
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/544 (31%), Positives = 283/544 (52%), Gaps = 23/544 (4%)
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALV--NCQ--RMDLAESYFKEMGA 142
N ++ YV ++ ++F MPLK+VVSWN +I +V NC+ + L F++M
Sbjct: 112 NQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHCFRQMVL 171
Query: 143 RDVASWTIMVNGLVREG------RIVEARKLFDKMPAKDVQAW--NLMIAGYLDNGCVGV 194
+A I +NGL+R I F D + + ++ Y G V
Sbjct: 172 EMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDE 231
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEK----TWNSIIS---V 247
A+ F ++ RDL W +++ + A FK M K T+ S+I+ V
Sbjct: 232 AQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGV 291
Query: 248 LIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGE-VGSAIKVFELMTTRDVTVWNVM 306
L GL K+ H + + + + +V + E + A K F+ M +++ W M
Sbjct: 292 LGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTM 351
Query: 307 IFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIAR 366
G G++ G+E ++ +M PD S+L+ C +L Q+HA ++
Sbjct: 352 XVGYGQHGDGKEXMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGF 411
Query: 367 NQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER 426
F +++NA+++ Y++CG+I SA FSSV DIISW S++ A+HG +++ +++FE+
Sbjct: 412 EAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEK 471
Query: 427 MRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFG 486
+ ++ +PD + F+GVLSAC++ G V +G +YF+ M N Y + P S HYT ++DLLGR G
Sbjct: 472 ILSSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAG 531
Query: 487 LIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLI 546
+DEA+NLL + +E GA LGAC+++ N+ + A E++ +EPN G Y +
Sbjct: 532 FLDEAVNLLTSMP---VEPRSDTLGAFLGACKVYRNVGLARWASEKLFVMEPNEPGKYSL 588
Query: 547 LTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYL 606
++ MY S G D R+ M+E K PGCSW++ H F+S D +HP+ ++ +
Sbjct: 589 MSNMYASVGHWFDVARVRKLMRERCDFKVPGCSWMETAGEVHTFVSRDKTHPRAVQVYGM 648
Query: 607 LNLL 610
L+LL
Sbjct: 649 LDLL 652
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 167/444 (37%), Gaps = 85/444 (19%)
Query: 12 LFDKMPQRDTVTWNVMIRGYFK------------------------------NGFL---- 37
+FD+MP ++ V+WN +I G + NG L
Sbjct: 130 MFDEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASI 189
Query: 38 ---DNAMC------LFNQMPERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNS 88
D +C + + + F + ++ + V A+ FD + RD+V WN
Sbjct: 190 ELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNV 249
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA------ 142
M+S Y NG+ +A VF M L+ V +++N + + K++
Sbjct: 250 MVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLS 309
Query: 143 --RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
DV + +V+ + I +ARK FD M K++ +W M GY +G
Sbjct: 310 FDLDVLVASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHG---------- 359
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
+G R + I + E + S L V + H+Y
Sbjct: 360 --------------DGKEXMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAY 405
Query: 261 LEKYPYSNIASWTNVIV-GYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEG 319
+ + + S N +V Y + G +GSA + F + D+ W ++ + L ++G
Sbjct: 406 VVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKQG 465
Query: 320 LKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQ-----IHAQAIKIARNQFTTVSN 374
+ F ++ S PD F VL+ C+ + G I+ I +T++
Sbjct: 466 VDVFEKILSSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTSI-- 523
Query: 375 AMITMYARCGNIQSALLEFSSVPI 398
I + R G + A+ +S+P+
Sbjct: 524 --IDLLGRAGFLDEAVNLLTSMPV 545
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 138/321 (42%), Gaps = 66/321 (20%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVI-- 59
+ EAQ+ FD++ RD V WNVM+ Y NG A +F M + D FT+ ++I
Sbjct: 229 VDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINS 288
Query: 60 -------------AGLM--------------------QSDNVQGAKEVFDGMEVRDVVTW 86
GL+ +++N++ A++ FDGM V+++V+W
Sbjct: 289 CGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMJVKNIVSW 348
Query: 87 NSMISGYVCNG-------LIDEALRVF---HGMPLKDVVSWNLVIGALVNCQRMDLAESY 136
+M GY +G L+ E +RV+ + L ++S G L + +Y
Sbjct: 349 TTMXVGYGQHGDGKEXMRLLQEMIRVYTYPDELALASILS---SCGNLSATSEVVQVHAY 405
Query: 137 FKEMGARDVASWT-IMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVA 195
E G S +V+ + G I A + F + D+ +W ++ Y +G
Sbjct: 406 VVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKQG 465
Query: 196 EDLFQKMHDRDLTSWKQLINGLVNS-----------RRIDAAISYFKQMPETCEKTWNSI 244
D+F+K+ ++ K G++++ + I+ ++ MP++ + + SI
Sbjct: 466 VDVFEKILSSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDS--EHYTSI 523
Query: 245 ISVLIRNGLVKEAHSYLEKYP 265
I +L R G + EA + L P
Sbjct: 524 IDLLGRAGFLDEAVNLLTSMP 544
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 14/230 (6%)
Query: 332 SPDNATFTS-VLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSAL 390
S +F+S L I + L L G+Q+HA IK+ ++ N ++ +Y +C
Sbjct: 69 SCSTHSFSSHALKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVC 128
Query: 391 LEFSSVPIHDIISWNSIICGLAYHGYAEKAL-----ELFERMRLTDFKPDDITFVGVLSA 445
F +P+ +++SWN++ICG+ G + AL F +M L P+ IT G+L A
Sbjct: 129 KMFDEMPLKNVVSWNTLICGVV-EGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRA 187
Query: 446 CSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEV 505
V R C K + +VD +FGL+DEA + +E+ + +
Sbjct: 188 SIELNDVGICR-QLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDL-- 244
Query: 506 SPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCG 555
+W ++ +C N ++ ++M LE G T M SCG
Sbjct: 245 --VLWNVMV-SCYALNGVQGKAFGVFKLMRLE-GVKGDXFTFTSMINSCG 290
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 40/246 (16%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+N I++A+ FD M ++ V+W M GY ++G M L +M + +A
Sbjct: 326 KNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYPDELALAS 385
Query: 62 LMQS-DNVQGAKEVF--------DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++ S N+ EV +G E + N+++S Y G I A + F +
Sbjct: 386 ILSSCGNLSATSEVVQVHAYVVENGFEAFLSIA-NALVSAYSKCGSIGSAFQSFSSVAEP 444
Query: 113 DVVSWNLVIGAL----VNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
D++SW ++GA ++ Q +D+ E D ++ +++ G ++E F
Sbjct: 445 DIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHGGFVLEGLHYF 504
Query: 169 DKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAIS 228
NLMI +++Q M D + + +I+ L + +D A++
Sbjct: 505 -----------NLMI-------------NVYQIMPDSE--HYTSIIDLLGRAGFLDEAVN 538
Query: 229 YFKQMP 234
MP
Sbjct: 539 LLTSMP 544
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 138/365 (37%), Positives = 217/365 (59%), Gaps = 9/365 (2%)
Query: 242 NSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVT 301
NS++++ G +K A + ++ SWT+++ GY + G+V SA K+F+ M +++
Sbjct: 152 NSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLV 211
Query: 302 VWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQA 361
W+VMI G +N ++ ++ + ++ G + SV+ C+ L L+LG + H
Sbjct: 212 TWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDY- 270
Query: 362 IKIARNQFTT---VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAE 418
I RN+ T + A++ MYARCG+I A+ F +P D +SW ++I G A HGYAE
Sbjct: 271 --ILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAE 328
Query: 419 KALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCV 478
KALE F RM P +ITF VLSACS+ GLV++G F+ MK Y ++PR HY C+
Sbjct: 329 KALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCM 388
Query: 479 VDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEP 538
VDLLGR G + EA +NE+ ++ + +WGALLGACRIH N ++ E AG+ ++EL+P
Sbjct: 389 VDLLGRAGKLAEAEKFVNEM---PMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKP 445
Query: 539 NNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHP 598
+SG Y++L+ +Y + E+ + I MKE GV K PG + +++ H F GD +HP
Sbjct: 446 EHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHP 505
Query: 599 KFHRL 603
+ ++
Sbjct: 506 EIQQI 510
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 197/457 (43%), Gaps = 51/457 (11%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGL 62
+A + A +FD + +I LD A +F Q+ ++F YN+ I G
Sbjct: 35 HAHLIRAHTIFD------VFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGF 88
Query: 63 MQSDNVQGAKEVF-----DGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----- 112
S + + + +G+ V D +T+ ++ G +D ++ HG ++
Sbjct: 89 SGSKDPDKSFHFYVQSKRNGL-VPDNLTYPFLVKACTQKGSLDMGIQA-HGQIIRHGFDS 146
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMP 172
DV N ++ + A F+ + DV SWT MV G ++ G + ARKLFDKMP
Sbjct: 147 DVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMP 206
Query: 173 AKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ 232
K++ W++MI+GY N A +L+ + + + + ++ ++ S A+
Sbjct: 207 EKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALE---- 262
Query: 233 MPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKV 291
L + AH Y+ + + N+ T ++ Y G + AI V
Sbjct: 263 --------------------LGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWV 302
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTL 351
F+ + RD W +I G + E+ L++F +M+++G +P TFT+VL+ CS +
Sbjct: 303 FDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLV 362
Query: 352 DLGRQIHAQAIKIARNQFTTVS-NAMITMYARCGNIQSALLEFSSVPIH-DIISWNSIIC 409
+ G ++ + R + M+ + R G + A + +P+ + W +++
Sbjct: 363 ERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLG 422
Query: 410 GLAYHGYAEKALELFERM--RLTDFKPDDITFVGVLS 444
H K E+ ER L + KP+ + +LS
Sbjct: 423 ACRIH----KNSEIAERAGKTLIELKPEHSGYYVLLS 455
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 54/240 (22%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
+++ + A+ LFDKMP+++ VTW+VMI GY KN F D A+ L+ + + TV+
Sbjct: 190 IKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMV 249
Query: 61 GLMQSDNVQGAKE---------------------------------------VFDGMEVR 81
++ S GA E VFD + R
Sbjct: 250 SVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGR 309
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVN-CQRMDLAE---SYF 137
D ++W ++I+G+ +G ++AL F M + + A+++ C L E F
Sbjct: 310 DALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELF 369
Query: 138 KEMGARD------VASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
+ M RD + + MV+ L R G++ EA K ++MP K N I G L C
Sbjct: 370 ESM-KRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKP----NAPIWGALLGAC 424
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 263/498 (52%), Gaps = 24/498 (4%)
Query: 126 NCQRMDLAESYFKEMGARDVASWTIMVNGLVR-------EGRIVEARKLFDKMPAKDVQA 178
CQ M Y ++ ++S ++ L+ + A KLFD +P D
Sbjct: 31 KCQSMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAFL 90
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMH---DRDLTSWKQLINGLVNSRRIDAAIS----YFK 231
+N +I G+L + + L H + L + + L+ R+I + FK
Sbjct: 91 YNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKIQHGMQIHAHLFK 150
Query: 232 QMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKV 291
NS+I + + ++EA P+ + SWT++I GY + G + A +
Sbjct: 151 FGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDEAFTI 210
Query: 292 FELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK-ESGPSPDNATFTSVLTICSDLPT 350
F+LM ++ WN M+ + + E F +MK E+ D T++L+ C+ L
Sbjct: 211 FQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGA 270
Query: 351 LDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD--IISWNSII 408
LD G+ IH + + ++ A++ MY +CG ++ AL F S+P+ I SWN +I
Sbjct: 271 LDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMI 330
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
GLA HG E A++LF+ M PDDITF+ +L+AC+++GLV++GR YF M Y +
Sbjct: 331 GGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGI 390
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSP--TVWGALLGACRIHNNIKVG 526
+PR H+ C+VDLLGR G++ EA L++E + VSP TV G LLGAC+ H NI++G
Sbjct: 391 EPRMEHFGCMVDLLGRAGMVPEARKLIDE-----MPVSPDVTVLGTLLGACKKHRNIELG 445
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
E G RV+ELEPNNSG Y++L +Y + G+ EDA ++ M + GVKK PG S I++
Sbjct: 446 EEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQGT 505
Query: 587 GHVFLSGDSSHPKFHRLR 604
H F++G+ +HP+ L
Sbjct: 506 VHEFIAGERNHPQAKELH 523
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 178/418 (42%), Gaps = 51/418 (12%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFL--DNAMCLFNQMPERDMFTYNTVIAGLMQSD 66
A LFD +PQ D +N +I+G+ + L ++ + L++ M + + N L+ +
Sbjct: 76 ALKLFDSIPQPDAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIA- 134
Query: 67 NVQGAKEVFDGMEVR----------DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
+++ GM++ V NS+I YV ++EA RVFH +P D VS
Sbjct: 135 ----CRKIQHGMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVS 190
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
W +I +D A + F+ M ++ ASW M+ V+ R EA LFD+M A++
Sbjct: 191 WTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENN 250
Query: 177 QAWNLMIAGYLDNGCVGV-AEDLFQKMH----------DRDLTSWKQLINGLVNSRRIDA 225
+ +A + + C G+ A D + +H D LT+ +++ ++
Sbjct: 251 NVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTT--AIVDMYCKCGCLEK 308
Query: 226 AISYFKQMPETCE--KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGY 279
A+ F +P C +WN +I L +G + A ++ +A ++ N++
Sbjct: 309 ALQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTAC 368
Query: 280 FEMGEVGSAIKVFELM-----TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPD 334
G V F M + + M+ LG + E K +M SPD
Sbjct: 369 AHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMP---VSPD 425
Query: 335 NATFTSVLTICSDLPTLDLGRQIHAQAIKIARN---QFTTVSNAMITMYARCGNIQSA 389
++L C ++LG +I + I++ N ++ ++N +YA G + A
Sbjct: 426 VTVLGTLLGACKKHRNIELGEEIGRRVIELEPNNSGRYVLLAN----LYANAGKWEDA 479
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 116/280 (41%), Gaps = 83/280 (29%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
++EA+ +F +P D+V+W +I GY K G +D A +F MP+++ ++N ++A +Q+
Sbjct: 173 LEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQT 232
Query: 66 DNVQGAKEVFDGME-----VRDVVTWNSMISG---------------------------- 92
+ A +FD M+ V D +M+S
Sbjct: 233 NRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKL 292
Query: 93 -------YVCNGLIDEALRVFHGMPL--KDVVSWNLVIGALVNCQRMDLAESYFKEMGAR 143
Y G +++AL+VFH +PL + + SWN +IG L + A FKEM +
Sbjct: 293 TTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQ 352
Query: 144 DVASWTIMV---------NGLVREGR-------------------------------IVE 163
VA I +GLV EGR + E
Sbjct: 353 RVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPE 412
Query: 164 ARKLFDKMP-AKDVQAWNLMIAGYLDNGCVGVAEDLFQKM 202
ARKL D+MP + DV ++ + + + E++ +++
Sbjct: 413 ARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEIGRRV 452
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 163/510 (31%), Positives = 266/510 (52%), Gaps = 45/510 (8%)
Query: 83 VVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGA 142
+ T SM+ + +I AL++F +P D WN I A + + +M
Sbjct: 41 LTTAMSMVGPNATSAVIRYALQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQ 100
Query: 143 RDVA----SWTIMVNGL-----VREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVG 193
R V ++ ++ V G V R L +V N ++ + G +
Sbjct: 101 RSVKPDNFTFPFVLKACTKLFWVNTGSAVHGRVLRLGF-GSNVVVRNTLLVFHAKCGDLK 159
Query: 194 VAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGL 253
VA D+F D+ +W LI G + A F +MP+ +WN +I+V ++G
Sbjct: 160 VATDIFDDSDKGDVVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGE 219
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGEN 313
++ A ++ P +I SW +I GY
Sbjct: 220 MESARRLFDEAPMKDIVSWNALIGGYV-------------------------------LR 248
Query: 314 DLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTT-V 372
+L E L+ F +M G PD T S+L+ C+DL L+ G ++HA+ I++ + + +T +
Sbjct: 249 NLNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMNKGKLSTLL 308
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDF 432
NA++ MYA+CGNI A+ F + D++SWNS+I GLA+HG+AE++L LF M++T
Sbjct: 309 GNALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMTKV 368
Query: 433 KPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAM 492
PD++TFVGVL+ACS+AG VD+G YF MKNKY ++P H CVVD+LGR GL+ EA
Sbjct: 369 CPDEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAF 428
Query: 493 NLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYL 552
N + ++ IE + VW +LLGAC++H ++++ + A E+++ + + SG Y++L+ +Y
Sbjct: 429 NFIASMK---IEPNAIVWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGDYVLLSNVYA 485
Query: 553 SCGRREDAKRIFAQMKENGVKKEPGCSWIQ 582
S G + A+ + M +NGV K G S+++
Sbjct: 486 SQGEWDGAENVRKLMDDNGVTKNRGSSFVE 515
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 196/446 (43%), Gaps = 49/446 (10%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTV 58
+A I+ A +F ++PQ DT WN IRG ++ +A+ L+ QM +R D FT+ V
Sbjct: 54 SAVIRYALQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFV 113
Query: 59 IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWN 118
+ + V V G +R G+ N ++ L VFH
Sbjct: 114 LKACTKLFWVNTGSAVH-GRVLR---------LGFGSNVVVRNTLLVFHA---------- 153
Query: 119 LVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA 178
C + +A F + DV +W+ ++ G + G + ARKLFD+MP +D+ +
Sbjct: 154 -------KCGDLKVATDIFDDSDKGDVVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVS 206
Query: 179 WNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM----- 233
WN+MI Y +G + A LF + +D+ SW LI G V A+ F +M
Sbjct: 207 WNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIGGYVLRNLNREALELFDEMCGVGE 266
Query: 234 -PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWT----NVIVG-YFEMGEVGS 287
P+ E T S++S G ++ K N + N +V Y + G +G
Sbjct: 267 CPD--EVTMLSLLSACADLGDLESGEKVHAKIIEMNKGKLSTLLGNALVDMYAKCGNIGK 324
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A++VF L+ +DV WN +I GL + EE L F +MK + PD TF VL CS
Sbjct: 325 AVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMTKVCPDEVTFVGVLAACSH 384
Query: 348 LPTLDLG-RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWN 405
+D G R H K ++ M R G ++ A +S+ I + I W
Sbjct: 385 AGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAFNFIASMKIEPNAIVWR 444
Query: 406 SIICGLAYHG---YAEKALELFERMR 428
S++ HG A++A E RMR
Sbjct: 445 SLLGACKVHGDVELAKRANEQLLRMR 470
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 149/340 (43%), Gaps = 25/340 (7%)
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASW-----TNVIVGYFEMGEVGSAIKVFEL 294
T I +++I NGL +L K + S T+ ++ Y A+++F
Sbjct: 16 TLKQIHALMIVNGLTSNV-GFLRKLVLTTAMSMVGPNATSAVIRY--------ALQMFAQ 66
Query: 295 MTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLG 354
+ D +WN I G ++ + + QM + PDN TF VL C+ L ++ G
Sbjct: 67 IPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKLFWVNTG 126
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
+H + +++ V N ++ +A+CG+++ A F D+++W+++I G A
Sbjct: 127 SAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIAGYAQR 186
Query: 415 GYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAH 474
G A +LF+ M K D +++ +++ + G ++ R FD K + +
Sbjct: 187 GDLSVARKLFDEMP----KRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALI 242
Query: 475 YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM 534
V+ L R EA+ L +E+ G +LL AC +++ GE +++
Sbjct: 243 GGYVLRNLNR-----EALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKII 297
Query: 535 ELEPNNSGVYL--ILTEMYLSCGRREDAKRIFAQMKENGV 572
E+ L L +MY CG A R+F +++ V
Sbjct: 298 EMNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDKDV 337
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-------PERDMFT 54
++ ++ A+ LFD+ P +D V+WN +I GY A+ LF++M E M +
Sbjct: 216 KHGEMESARRLFDEAPMKDIVSWNALIGGYVLRNLNREALELFDEMCGVGECPDEVTMLS 275
Query: 55 YNTVIAGL--MQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
+ A L ++S AK + + N+++ Y G I +A+RVF + K
Sbjct: 276 LLSACADLGDLESGEKVHAKIIEMNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDK 335
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLV----REGRIVEARKLF 168
DVVSWN VI L + + F+EM V + G++ G + E + F
Sbjct: 336 DVVSWNSVISGLAFHGHAEESLGLFREMKMTKVCPDEVTFVGVLAACSHAGNVDEGNRYF 395
Query: 169 DKMPAK 174
M K
Sbjct: 396 HLMKNK 401
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/414 (36%), Positives = 230/414 (55%), Gaps = 16/414 (3%)
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQ-------MPETCEKTWNSIISV 247
A +F +M +R+L SW +I G ++ D A+ FK +P E + +S++S
Sbjct: 64 AVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPN--EVSVSSVLSA 121
Query: 248 LIRNG---LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVW 303
G ++ H + K+ + N ++ YF+ +K+F+ + RDV W
Sbjct: 122 CANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTW 181
Query: 304 NVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIK 363
NV++ G +ND EE +F M+ G PD A+F++VL + L L G IH Q IK
Sbjct: 182 NVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIK 241
Query: 364 IARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALEL 423
+ + + ++ITMYA+CG++ A F + H++ISW ++I HG A + +EL
Sbjct: 242 LGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIEL 301
Query: 424 FERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG 483
FE M +P +TFV VLSACS+ G V++G +F+ MK + + P HY C+VDLLG
Sbjct: 302 FEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLG 361
Query: 484 RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGV 543
R G +DEA + + ++ +P+VWGALLGACR + N+K+G A ER+ E+EP N G
Sbjct: 362 RAGWLDEAKRFIESMP---MKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGN 418
Query: 544 YLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
Y++L M GR E+A + M NGV+KEPGCSWI + + VF + D SH
Sbjct: 419 YVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSH 472
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 149/339 (43%), Gaps = 67/339 (19%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAG 61
+ A + A +FD+MP+R+ V+WN MI G+F N D A+ +F +D+ TVI
Sbjct: 57 KCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVF-----KDVLREKTVIPN 111
Query: 62 LMQSDNVQGAKEVFDGM----EVRDVV----------TWNSMISGYVCNGLIDEALRVFH 107
+ +V A G+ +V VV NS++ Y DE +++F
Sbjct: 112 EVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQ 171
Query: 108 GMPLKDVVSWNLVIGALVNCQRMDLAESYF----KEMGARDVASWTIMVN---------- 153
+ +DVV+WN+++ V + + A +YF +E D AS++ +++
Sbjct: 172 CVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQ 231
Query: 154 -----------GLVRE--------------GRIVEARKLFDKMPAKDVQAWNLMIAGYLD 188
G V+ G +V+A ++F+ + +V +W MI+ Y
Sbjct: 232 GTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQL 291
Query: 189 NGCVGVAEDLFQKMHDRDL----TSWKQLINGLVNSRRIDAAISYFKQMPETCE-----K 239
+GC +LF+ M + ++ +++ ++ R++ +++F M + + +
Sbjct: 292 HGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPE 351
Query: 240 TWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVG 278
+ ++ +L R G + EA ++E P S ++G
Sbjct: 352 HYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLG 390
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 174/419 (41%), Gaps = 37/419 (8%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+ ++F ++ + ++ A VFD M R++V+WNSMI G+ N L D A+ VF
Sbjct: 42 DANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKD 101
Query: 109 M-----PLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVR---EGR 160
+ + + VS + V+ A N ++ + + T ++N L+ + R
Sbjct: 102 VLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCR 161
Query: 161 IV-EARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
E KLF + +DV WN+++ G++ N A + F M + + + +++
Sbjct: 162 FFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLH 221
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGY 279
S AA+ +I +I+ G VK N+ ++I Y
Sbjct: 222 SSASLAAL-----------HQGTAIHDQIIKLGYVK------------NMCILGSLITMY 258
Query: 280 FEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFT 339
+ G + A +VFE + +V W MI + + ++ F M G P + TF
Sbjct: 259 AKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFV 318
Query: 340 SVLTICSDLPTLDLGRQIHAQAIKIA-RNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
VL+ CS ++ G KI N M+ + R G + A S+P+
Sbjct: 319 CVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPM 378
Query: 399 HDIIS-WNSIICGLAYHGYAEKALELFERM-RLTDFKPDDITFVGVLSACSYAGLVDQG 455
S W +++ +G + E ER+ + + P + +V + + C+ +G +++
Sbjct: 379 KPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGN--YVLLANMCTRSGRLEEA 435
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 32/279 (11%)
Query: 326 MKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGN 385
M+ SGP P+ TF+S+L+ + + G+Q+H+ K + V A++ MYA+C +
Sbjct: 1 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60
Query: 386 IQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFER-MRLTDFKPDDITFVGVLS 444
+ SA+ F +P +++SWNS+I G ++ ++A+ +F+ +R P++++ VLS
Sbjct: 61 MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120
Query: 445 ACSYAGLVDQGR---------------YYFDCMKNKY----FLQPRSAHYTCVVD----- 480
AC+ G ++ GR Y + + + Y F + CV D
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180
Query: 481 ----LLG--RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVM 534
++G + +EA N +R +GI + +L + + G ++++
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240
Query: 535 EL-EPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+L N + L MY CG DA ++F ++++ V
Sbjct: 241 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNV 279
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 54/272 (19%)
Query: 8 EAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER----DMFTYNTVI---- 59
E LF + RD VTWNV++ G+ +N + A F M D +++TV+
Sbjct: 165 EGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSA 224
Query: 60 --AGLMQSDNVQG-----------------------------AKEVFDGMEVRDVVTWNS 88
A L Q + A +VF+G+E +V++W +
Sbjct: 225 SLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTA 284
Query: 89 MISGYVCNGLIDEALRVFHGMPLKDV----VSWNLVIGALVNCQRMDLAESYFKEMGA-R 143
MIS Y +G ++ + +F M + + V++ V+ A + R++ ++F M
Sbjct: 285 MISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIH 344
Query: 144 DV----ASWTIMVNGLVREGRIVEARKLFDKMPAKDVQA-WNLMIAGYLDNGCVGV---- 194
D+ + MV+ L R G + EA++ + MP K + W ++ G + +
Sbjct: 345 DMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREA 404
Query: 195 AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAA 226
AE LF+ M + ++ L N S R++ A
Sbjct: 405 AERLFE-MEPYNPGNYVLLANMCTRSGRLEEA 435
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 25/553 (4%)
Query: 49 ERDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHG 108
+D + +IA ++N+ A VF+ + +V +N +I Y +G +L F G
Sbjct: 51 HQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAF-G 109
Query: 109 MPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
+ LK V G L D F G +SW +V ++V A
Sbjct: 110 VLLKMHVD-----GVLA-----DNFTYPFLLKGCNGSSSWLSLV-------KMVHAH--V 150
Query: 169 DKMPAK-DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAI 227
+K+ D+ N +I Y G V +A +F M +RD+ SW ++ GLV + +D A+
Sbjct: 151 EKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGAL 210
Query: 228 SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGS 287
F +MPE +WN+++ + G + +A E+ +I SW+ ++ GY + G++
Sbjct: 211 KVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDM 270
Query: 288 AIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSD 347
A +F+ +++ +W +I G E +E + +M++SG D+ F S+L C++
Sbjct: 271 ARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAE 330
Query: 348 LPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIH-DIISWNS 406
L LG+++H ++ T V N+ I MYA+CG + A F+ + D++SWNS
Sbjct: 331 SGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNS 390
Query: 407 IICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKY 466
+I G HG+ EK++ELF M FKPD TF+G+L AC++AGLV++GR YF M+ Y
Sbjct: 391 MIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVY 450
Query: 467 FLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
+ P+ HY C+VDLLGR G + EA L +R+ E + + G LLGACR+HN++K+
Sbjct: 451 GIVPQIEHYGCMVDLLGRGGHLKEAFWL---VRSMPFEPNAIILGTLLGACRMHNDVKLA 507
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDG 586
+ + +L P++ G + +L+ +Y G + ++ QM + G +K G S I++ +
Sbjct: 508 TSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEE 567
Query: 587 GHVFLSGDSSHPK 599
H F D SHPK
Sbjct: 568 VHEFTVRDWSHPK 580
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 205/438 (46%), Gaps = 48/438 (10%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPE-------RDMFTYNTV 58
+ A N+F+++P + +N +IR Y +G N++C F + + D FTY +
Sbjct: 70 LSSAVNVFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFL 129
Query: 59 IAGLMQSDN-VQGAKEVFDGME----VRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
+ G S + + K V +E D+ NS+I Y G ++ A++VF GM +D
Sbjct: 130 LKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERD 189
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
VVSWN ++G LV +D A F EM RD SW M++G + G + +A KLF++M
Sbjct: 190 VVSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAE 249
Query: 174 KDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQM 233
+D+ +W+ M+ GY NG + +A LF + ++L W +I+G ++ A++ +M
Sbjct: 250 RDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEM 309
Query: 234 PETCEKT----WNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEM----GEV 285
++ + + SI++ +G++ + + S T V+ + +M G V
Sbjct: 310 EKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCV 369
Query: 286 GSAIKVFELMTT-RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTI 344
A +VF M T +D+ WN MI G G + GE+ ++ F M G PD TF +L
Sbjct: 370 DDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCA 429
Query: 345 CSDLPTLDLGRQIHAQAIKIARNQFTTVS------------NAMITMYARCGNIQSALLE 392
C+ HA + R F ++ M+ + R G+++ A
Sbjct: 430 CT-----------HAGLVNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWL 478
Query: 393 FSSVPIHDIISWNSIICG 410
S+P N+II G
Sbjct: 479 VRSMPFEP----NAIILG 492
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 144/306 (47%), Gaps = 30/306 (9%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
++N + A +FD+MP+RD V+WN M+ G+ K G +D A LF +M ERD+ +++T++
Sbjct: 201 VKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVC 260
Query: 61 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVV 115
G ++ ++ A+ +FD V+++V W ++ISGY G + EA+ + G+ L D
Sbjct: 261 GYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDD-- 318
Query: 116 SWNLVIGALVNCQR-------MDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLF 168
I L C + +S+ + ++ + G + +A ++F
Sbjct: 319 --GFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVF 376
Query: 169 DKMPA-KDVQAWNLMIAGYLDNGCVGVAEDLFQKM----HDRDLTSWKQLINGLVNSRRI 223
+ M KD+ +WN MI G+ +G + +LF M D ++ L+ ++ +
Sbjct: 377 NGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLV 436
Query: 224 DAAISYFKQM-------PETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVI 276
+ YF M P+ + + ++ +L R G +KEA + P+ A +
Sbjct: 437 NEGRGYFYSMQRVYGIVPQI--EHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTL 494
Query: 277 VGYFEM 282
+G M
Sbjct: 495 LGACRM 500
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 38/235 (16%)
Query: 355 RQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYH 414
+QIHAQ IK +Q ++ +I Y+ N+ SA+ F+ VP ++ +N +I +
Sbjct: 39 KQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLS 98
Query: 415 GYAEKALELFE---RMRLTDFKPDDITFVGVLSAC----SYAGL-------VDQGRYYFD 460
G +L F +M + D+ T+ +L C S+ L V++ +Y+D
Sbjct: 99 GNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWD 158
Query: 461 CMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV-WGALLGACRI 519
P S ++D R G ++ AM + + G+E V W +++G
Sbjct: 159 ------IFVPNS-----LIDCYCRCGDVEMAMKVFS-----GMEERDVVSWNSMVGGL-- 200
Query: 520 HNNIKVGEIAGE-RVMELEPNNSGV-YLILTEMYLSCGRREDAKRIFAQMKENGV 572
+K G++ G +V + P V + + + + G + A ++F +M E +
Sbjct: 201 ---VKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDI 252
>gi|357478575|ref|XP_003609573.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510628|gb|AES91770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 665
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 175/636 (27%), Positives = 306/636 (48%), Gaps = 41/636 (6%)
Query: 2 RNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM-----PERDMFTYN 56
R+ RI A+ LFD+MP+RDTV WN M+ Y + G LF+ M + D F+Y+
Sbjct: 17 RSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDNFSYS 76
Query: 57 TVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVS 116
I ++ GA ++ G ++ +V ++SGY + + AL +G
Sbjct: 77 AAI------NSCAGASDIRFGTKLHSLV----VVSGYQSSLPVANALIDMYG-------- 118
Query: 117 WNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDV 176
C + A F EM + +W ++ R A ++F MP K
Sbjct: 119 ---------KCFNPNDARKVFDEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRSMPEKVE 169
Query: 177 QAWNLMIAGYLDNG----CVGVAEDLFQKMHDRDLTSWKQLINGLVNS-RRIDAAISY-- 229
AWN++IA + G C+ + +++ + ++ D ++ L++ S + + +
Sbjct: 170 IAWNIIIAAHARCGEVEACLHLFKEMCENLYQPDQWTFSALMSACTESMESLHGCMMHCF 229
Query: 230 -FKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSA 288
K T + NSI+S + +A N SW +I + ++G+ A
Sbjct: 230 VIKSGWSTAMEVNNSIVSFYAKLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKA 289
Query: 289 IKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDL 348
+ F+ +++ W MI G N G+ L F+ MK + D+ +VL C+ L
Sbjct: 290 LLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACASL 349
Query: 349 PTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSII 408
L G+ +H+ I + +++ V N++I MYA+CG+I+ + L + D++SWNS++
Sbjct: 350 AILVHGKMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRGINDKDLVSWNSML 409
Query: 409 CGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFL 468
+G +A+ +F M + +PD++TF G+L CS+ GL+D+G +F M +Y L
Sbjct: 410 FAFGLNGRGNEAICMFREMVASGVRPDEVTFTGLLMTCSHLGLIDEGFAFFQSMSLEYGL 469
Query: 469 QPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEI 528
H C+VD+LGR G + EA +L + + + + LLGAC H ++ G
Sbjct: 470 VQGMDHVACMVDMLGRGGYVAEAQSLARKYSKTSRDKTNSC-EVLLGACHAHGDLGTGSS 528
Query: 529 AGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGH 588
GE V LEP Y++L+ MY + G+ ++A+ + +M + GVKK PGCSWI+I +
Sbjct: 529 VGEYVKNLEPKKEVGYVLLSNMYCASGKWKEAEMVRKEMMDQGVKKVPGCSWIEIRNVVT 588
Query: 589 VFLSGDSSHPKFHRLRYLLNLLHTEIEREILFDAYY 624
F+SG++ +P + +L L E+ + + Y
Sbjct: 589 AFVSGNNLYPCMADISKILYFLELEMRHTRMIVSSY 624
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 144/353 (40%), Gaps = 50/353 (14%)
Query: 155 LVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMH-----DRDLTS 209
L R GRI ARKLFD+MP +D AWN M+ Y G DLF M D S
Sbjct: 15 LARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDNFS 74
Query: 210 WKQLINGLVNSRRIDAAIS---------YFKQMPETCEKTWNSIISVLIRNGLVKEAHSY 260
+ IN + I Y +P N++I + + +A
Sbjct: 75 YSAAINSCAGASDIRFGTKLHSLVVVSGYQSSLPVA-----NALIDMYGKCFNPNDARKV 129
Query: 261 LEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGL 320
++ YSN +W +++ Y A ++F M + WN++I E L
Sbjct: 130 FDEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACL 189
Query: 321 KFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMY 380
F +M E+ PD TF+++++ C++ G +H IK + V+N++++ Y
Sbjct: 190 HLFKEMCENLYQPDQWTFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFY 249
Query: 381 A-------------------------------RCGNIQSALLEFSSVPIHDIISWNSIIC 409
A + G+ Q ALL F P +I+SW S+I
Sbjct: 250 AKLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIV 309
Query: 410 GLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCM 462
G +G + AL LF M+ F+ DD+ VL AC+ ++ G+ C+
Sbjct: 310 GYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCI 362
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 50/219 (22%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIA 60
M+ Q+A F + P+++ V+W MI GY +NG D A+ LF M +R+ F + ++A
Sbjct: 281 MKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDM-KRNSFQLDDLVA 339
Query: 61 GLM----------------------------------------QSDNVQGAKEVFDGMEV 80
G + + +++G+K G+
Sbjct: 340 GAVLHACASLAILVHGKMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRGIND 399
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI-GALVNCQRMDLAE---SY 136
+D+V+WNSM+ + NG +EA+ +F M V + G L+ C + L + ++
Sbjct: 400 KDLVSWNSMLFAFGLNGRGNEAICMFREMVASGVRPDEVTFTGLLMTCSHLGLIDEGFAF 459
Query: 137 FKEMG-----ARDVASWTIMVNGLVREGRIVEARKLFDK 170
F+ M + + MV+ L R G + EA+ L K
Sbjct: 460 FQSMSLEYGLVQGMDHVACMVDMLGRGGYVAEAQSLARK 498
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 377 ITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERM-RLTDFKPD 435
I AR G I A F +P D ++WN+++ + G ++ +LF+ M R++D KPD
Sbjct: 12 IVSLARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPD 71
Query: 436 DITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLL 495
+ ++ +++C+ A + G + + Q ++D+ G+ ++A +
Sbjct: 72 NFSYSAAINSCAGASDIRFGTKLHSLVVVSGY-QSSLPVANALIDMYGKCFNPNDARKVF 130
Query: 496 NEIRADGIEVSPTVWGALLGA----CRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMY 551
+E+ + W +LL A CR ++ E+V E+ N I+ +
Sbjct: 131 DEMNYS----NEVTWCSLLFAYANTCRFDMAFEIFRSMPEKV-EIAWN------IIIAAH 179
Query: 552 LSCGRREDAKRIFAQMKEN 570
CG E +F +M EN
Sbjct: 180 ARCGEVEACLHLFKEMCEN 198
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 173/504 (34%), Positives = 266/504 (52%), Gaps = 33/504 (6%)
Query: 131 DLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG 190
D ++ + A+ ++ + G G+I + +F+ VQ +I+ Y
Sbjct: 45 DRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPF----VQTG--LISMYCKGS 98
Query: 191 CVGVAEDLFQK-MHDRDLT-SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVL 248
V A +F++ H R LT + L++G V++ + A+ F+QM E E + +++L
Sbjct: 99 LVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNE--EGVPVNSVTLL 156
Query: 249 ---------IRNGLVKEAHSYLEKYPYSNIASWTNV-IVGYFEMGEVGSAIKVFELMTTR 298
I L H KY + + S N I Y + G V A K+F+ M +
Sbjct: 157 GLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVK 216
Query: 299 DVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIH 358
+ WN M+ G +N L L+ + M +G PD T VL+ C++L +G ++
Sbjct: 217 GLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVE 276
Query: 359 AQAIKIARNQFTT---VSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
KI + FT+ ++NA+I MYARCGN+ A F +P ++SW +II G HG
Sbjct: 277 ---FKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHG 333
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
+ E A++LF+ M + +PD FV VLSACS+AGL DQG YF MK Y L+P HY
Sbjct: 334 HGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHY 393
Query: 476 TCVVDLLGRFGLIDEAMNLLNE--IRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERV 533
+C+VDLLGR G + EA L+ I+ DG VWGALLGAC+IH N+++ E+A ERV
Sbjct: 394 SCMVDLLGRAGRLKEAQTLIESMPIKPDG-----AVWGALLGACKIHKNVELAELAFERV 448
Query: 534 MELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSG 593
+ELEP N G Y++L+ +Y + + RI MKE +KK+PGCS++++ H F+ G
Sbjct: 449 IELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVG 508
Query: 594 DSSHPKFHRLRYLLNLLHTEIERE 617
D +H + + +L L I +E
Sbjct: 509 DRNHLQSDEIYRVLEELEAIIMQE 532
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 145/323 (44%), Gaps = 60/323 (18%)
Query: 2 RNARIQEAQNLFDK--MPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER--------- 50
+ + + A+ +F++ ++ TV +N ++ GY N A+ LF QM E
Sbjct: 96 KGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTL 155
Query: 51 ------------------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEV 80
D+ N I M+ +V A+++FD M V
Sbjct: 156 LGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPV 215
Query: 81 RDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL-VIGALVNCQRMDLAESYFKE 139
+ +++WN+M+SGY NGL L ++ M + V + ++G L +C + A+S E
Sbjct: 216 KGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLG-AQSVGHE 274
Query: 140 MGARDVASW--------TIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGC 191
+ + AS ++N R G + +A+ +FD MP + + +W +I GY +G
Sbjct: 275 VEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGH 334
Query: 192 VGVAEDLFQKM----HDRDLTSWKQLINGLVNSRRIDAAISYFKQMP-----ETCEKTWN 242
+A LF++M + D T++ +++ ++ D + YFK M E + ++
Sbjct: 335 GEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYS 394
Query: 243 SIISVLIRNGLVKEAHSYLEKYP 265
++ +L R G +KEA + +E P
Sbjct: 395 CMVDLLGRAGRLKEAQTLIESMP 417
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 49/251 (19%)
Query: 1 MRNARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PE----- 49
M+ + AQ LFD+MP + ++WN M+ GY +NG N + L+ M P+
Sbjct: 198 MKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLV 257
Query: 50 ----------------------------RDMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR 81
+ F N +I + N+ A+ VFDGM R
Sbjct: 258 GVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPER 317
Query: 82 DVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESYF 137
+V+W ++I GY +G + A+++F M D ++ V+ A + D YF
Sbjct: 318 TLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYF 377
Query: 138 KEMGAR-----DVASWTIMVNGLVREGRIVEARKLFDKMPAK-DVQAWNLMIAGYLDNGC 191
K M ++ MV+ L R GR+ EA+ L + MP K D W ++ +
Sbjct: 378 KMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKN 437
Query: 192 VGVAEDLFQKM 202
V +AE F+++
Sbjct: 438 VELAELAFERV 448
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 5/206 (2%)
Query: 301 TVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQ 360
T WN + L + + L + QM G P+ TF L C+ L LG Q H Q
Sbjct: 15 TPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQ 74
Query: 361 AIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHD---IISWNSIICGLAYHGYA 417
K+ V +I+MY + + +A F H + +N+++ G +
Sbjct: 75 ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEE-NFHSRKLTVCYNALVSGYVSNSKC 133
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
+A+ LF +M + +T +G++ AC ++ G C KY + C
Sbjct: 134 SEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGS-SLHCSTLKYGFDSDVSVVNC 192
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGI 503
+ + + G ++ A L +E+ G+
Sbjct: 193 FITMYMKCGSVNYAQKLFDEMPVKGL 218
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 178/623 (28%), Positives = 322/623 (51%), Gaps = 30/623 (4%)
Query: 2 RNARIQEAQNLFDKMPQR-DTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FTYN 56
+ R EA+ LF K+ R + V WNVMI G+ +NG +N++ + ++ ++
Sbjct: 186 KCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFT 245
Query: 57 TVIAGLMQSDNVQGAKEVF-DGMEV---RDVVTWNSMISGYVCNGLIDEALRVFHGMPLK 112
++ Q + V K+V D ++V D S+++ Y +I+ A +VF+ +P K
Sbjct: 246 CTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDK 305
Query: 113 DVVSWNLVIGALVNCQRMDLAESYFKEMGARDVAS--WTIM-------VNGLVREGRIVE 163
++ WN +I A V A +K+M V S +TI+ + GL GR++
Sbjct: 306 EIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIH 365
Query: 164 ARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRI 223
++ + + + ++ Y G A +F M +RD+ +W +I+G +R+
Sbjct: 366 T-EIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKY 424
Query: 224 DAAISYFKQMPETCEKTWNSIISVLIR--NGLVK-----EAHSYLEKYPYS-NIASWTNV 275
A+ +F+ M K + I++ +I GL K H ++ K ++ +++
Sbjct: 425 KEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSL 484
Query: 276 IVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDN 335
+ Y + G A +F M +++ WN +I N+L + + F Q+ + PD+
Sbjct: 485 LDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDS 544
Query: 336 ATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSS 395
+FTSVL S + L G+ +H +++ V N +I MY +CG ++ A F
Sbjct: 545 VSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFER 604
Query: 396 VPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQG 455
+ ++++WNS+I G HG KA+ELF+ MR + KPDD+TF+ +LS+C+++GL+++G
Sbjct: 605 ISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEG 664
Query: 456 RYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLG 515
+ F+ MK K+ ++PR HY +VDL GR G + +A + + + +E ++W +LL
Sbjct: 665 LHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMP---VEPDRSIWLSLLC 721
Query: 516 ACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKE 575
+C+IH N+++GE+ +++ +EP+ Y+ L +Y + + A MKE G+KK
Sbjct: 722 SCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKT 781
Query: 576 PGCSWIQINDGGHVFLSGDSSHP 598
PGCSWI++ + VF SGD S P
Sbjct: 782 PGCSWIEVRNKVDVFYSGDCSSP 804
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 135/587 (22%), Positives = 245/587 (41%), Gaps = 96/587 (16%)
Query: 8 EAQNLFDKMPQR-----DTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------------ 50
+A +FD++P+ D WN +I GYF+ G L+ M F +M
Sbjct: 106 DAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYKEGKQIHSYI 165
Query: 51 -------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVR-DVVTWNSMISGYVCNGLIDEA 102
D F +I + A+ +F ++ R ++V WN MI G+ NGL + +
Sbjct: 166 VRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENS 225
Query: 103 LRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGAR------------DVASWTI 150
L + ++V V+ + C + F G + D T
Sbjct: 226 LEYYLLAKTENVK----VVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTS 281
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
++ + I A K+F+++P K+++ WN +I+ Y+ NG A ++++M
Sbjct: 282 LLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQM-------- 333
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPY-SNI 269
+L L +S I + T +S+ + L+ H+ + K P S+I
Sbjct: 334 -KLCTVLSDSFTILNVL------------TSSSMAGLYDLGRLI---HTEIVKRPLQSSI 377
Query: 270 ASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
+ ++ Y + G+ A +F M RDV W +I G +N +E L FF M+
Sbjct: 378 TIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEAD 437
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
PD+ S+++ C+ L +DLG IH IK V+++++ MY++ G + A
Sbjct: 438 LVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERA 497
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
FS +P+ ++++WNSII + + ++ LF ++ D PD ++F VL+A S
Sbjct: 498 GNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSV 557
Query: 450 GLVDQGR-----------------------YYFDCMKNKY-------FLQPRSAHYTCVV 479
+ +G+ Y C KY + + ++
Sbjct: 558 AALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMI 617
Query: 480 DLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG 526
G G +A+ L +E+R+ GI+ + +LL +C I+ G
Sbjct: 618 GGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEG 664
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 171/370 (46%), Gaps = 45/370 (12%)
Query: 151 MVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSW 210
++N V+ G +A K+FD++P GV+ D D+T W
Sbjct: 94 LINIYVKCGTFTDAVKVFDQLPKS------------------GVSVD--------DVTIW 127
Query: 211 KQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA 270
+I+G +++ + F +M + K I S ++RN L +LE
Sbjct: 128 NSIIDGYFRFGQLEEGMVQFGRMQSSGYKEGKQIHSYIVRNML--NFDPFLE-------- 177
Query: 271 SWTNVIVGYFEMGEVGSAIKVFELMTTR-DVTVWNVMIFGLGENDLGEEGLKFFVQMKES 329
T +I YF+ G A +F+ + R ++ WNVMI G GEN L E L++++ K
Sbjct: 178 --TALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTE 235
Query: 330 GPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSA 389
+++FT L+ C + G+Q+H AIK+ V +++TMY +C I+SA
Sbjct: 236 NVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESA 295
Query: 390 LLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACSYA 449
F+ VP +I WN++I +GYA AL ++++M+L D T + VL++ S A
Sbjct: 296 EKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMA 355
Query: 450 GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTV 509
GL D GR + + +P + T LL + ++ N N I + E
Sbjct: 356 GLYDLGRL----IHTEIVKRPLQSSITIQSALLTMYSKFGDS-NYANSIFSTMKERDVVA 410
Query: 510 WGALL-GACR 518
WG+++ G C+
Sbjct: 411 WGSVISGFCQ 420
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 137/338 (40%), Gaps = 59/338 (17%)
Query: 273 TNVIVGYFEMGEVGSAIKVFELM-----TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMK 327
+++I Y + G A+KVF+ + + DVT+WN +I G EEG+ F +M+
Sbjct: 92 SSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQ 151
Query: 328 ESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQ 387
SG G+QIH+ ++ N + A+I Y +CG
Sbjct: 152 SSGYKE--------------------GKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPT 191
Query: 388 SALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC 446
A F + +I++WN +I G +G E +LE + + + K +F LSAC
Sbjct: 192 EARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSAC 251
Query: 447 SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVS 506
V G+ C K + +T ++ + G+ +I+ A + NE+ IE+
Sbjct: 252 GQGEFVSFGK-QVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELW 310
Query: 507 PTVWGALLG------ACRIHNNIKVGEIAGERVMEL----EPNNSGVY----LILTE--- 549
+ A +G A RI+ +K+ + + L + +G+Y LI TE
Sbjct: 311 NALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVK 370
Query: 550 ---------------MYLSCGRREDAKRIFAQMKENGV 572
MY G A IF+ MKE V
Sbjct: 371 RPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDV 408
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 108/258 (41%), Gaps = 25/258 (9%)
Query: 337 TFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSV 396
T+ S+L C+ L L G+ IH+ I + +++++I +Y +CG A+ F +
Sbjct: 55 TYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQL 114
Query: 397 P-----IHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKP---------------DD 436
P + D+ WNSII G G E+ + F RM+ + +K D
Sbjct: 115 PKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYKEGKQIHSYIVRNMLNFDP 174
Query: 437 ITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLN 496
++ G + RY F +K++ + ++ G GL + ++
Sbjct: 175 FLETALIDTYFKCGRPTEARYLFKKLKDR----SNIVAWNVMIGGFGENGLWENSLEYYL 230
Query: 497 EIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYLSCG 555
+ + ++V + + L AC + G ++ + + ++ V+ L MY C
Sbjct: 231 LAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQ 290
Query: 556 RREDAKRIFAQMKENGVK 573
E A+++F ++ + ++
Sbjct: 291 MIESAEKVFNEVPDKEIE 308
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 177/573 (30%), Positives = 290/573 (50%), Gaps = 44/573 (7%)
Query: 39 NAMCLFNQMPERDMFTYNTV-IAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNG 97
+A+ L + +F+ + L S ++ A+++F M+ D N+MI GY +
Sbjct: 31 HALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQ 90
Query: 98 LIDEALRVFH-----GMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMV 152
EA+ +++ G+P+ D ++ V+ A + L + E+ S ++
Sbjct: 91 NPYEAVSLYYFMVERGVPV-DNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVI 149
Query: 153 NGLVR----EGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLT 208
N L++ G A +FD+ +DV WN+MI +L+ G A DL +M D
Sbjct: 150 NALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD-- 207
Query: 209 SWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA---HSYLEKYP 265
N R P+ E T S++ + G ++ HSY ++
Sbjct: 208 ----------NLR------------PD--EVTMVSLVPACAQLGNLERGKFLHSYSKELG 243
Query: 266 YSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFV 324
N I+ Y + ++ SA +VF + +DV W M+ GL ++ +E L F
Sbjct: 244 LDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQ 303
Query: 325 QMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCG 384
+M+ + D T VL+ C+ LD G+ IH K N + A++ MYA+CG
Sbjct: 304 KMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCG 363
Query: 385 NIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLS 444
+I AL F + + ++ +WN++I GLA HG+ E A+ LF++M PDD+TF+ +L
Sbjct: 364 SIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLC 423
Query: 445 ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIE 504
ACS+AGLVD+G F MKNK+ ++PR HY CVVDLL R +D+A+ + + I+
Sbjct: 424 ACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENM---PIK 480
Query: 505 VSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIF 564
+ +W LLGACR + + E G RV+ELEP++ G Y++L+ +Y + + A ++
Sbjct: 481 ANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLR 540
Query: 565 AQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
QMK G++K PGCSWI++N H F++GD SH
Sbjct: 541 KQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSH 573
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 128/519 (24%), Positives = 215/519 (41%), Gaps = 98/519 (18%)
Query: 9 AQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPER------------------ 50
A+ LF +M D N MIRGY ++ A+ L+ M ER
Sbjct: 64 ARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACAR 123
Query: 51 ---------------------DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSM 89
D+F N +I + A +VFD VRDVVTWN M
Sbjct: 124 LGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIM 183
Query: 90 ISGYVCNGLIDEALRVFHGMPLKD--------VVSWNLVIGALVNCQRMDLAESYFKEMG 141
I+ ++ GL ++A + M D +VS L N +R SY KE+G
Sbjct: 184 INAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELG 243
Query: 142 A-RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQ 200
++ +++ + I A+++F+++ KDV +W M++G +G A LFQ
Sbjct: 244 LDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQ 303
Query: 201 KMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEA--- 257
KM +N +D E T ++S + G + +
Sbjct: 304 KMQ--------------LNKIELD-------------EITLVGVLSACAQTGALDQGKYI 336
Query: 258 HSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLG 316
H ++K+ + ++ T ++ Y + G + A++VF M R+V WN +I GL + G
Sbjct: 337 HLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHG 396
Query: 317 EEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN-- 374
E+ + F QM+ PD+ TF ++L CS +D G + QA+K N+F
Sbjct: 397 EDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMF-QAMK---NKFQIEPRME 452
Query: 375 ---AMITMYARCGNIQSALLEFSSVPIH-DIISWNSIICGLAYHGYAEKALELFERM--R 428
++ + R + AL ++PI + + W +++ G+ +L E++ R
Sbjct: 453 HYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGH----FDLAEKIGRR 508
Query: 429 LTDFKPDDITFVGVLSACSYAGLV--DQGRYYFDCMKNK 465
+ + +PD +LS YAG+ D MKNK
Sbjct: 509 VIELEPDSCGRYVMLSNL-YAGVSQWDHALKLRKQMKNK 546
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 48/246 (19%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTVIAG 61
I+ AQ +F+++ ++D ++W M+ G K+G+ A+ LF +M E D T V++
Sbjct: 264 IESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSA 323
Query: 62 LMQSDNVQGAKEV---FDGMEVR-DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
Q+ + K + D E+ D+V +++ Y G ID AL+VF M +++V +W
Sbjct: 324 CAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTW 383
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
N +IG L + A S F +M DK+ DV
Sbjct: 384 NALIGGLAMHGHGEDAISLFDQME--------------------------HDKLMPDDVT 417
Query: 178 AWNLMI----AGYLDNGCVGVAEDLFQKMHDR-----DLTSWKQLINGLVNSRRIDAAIS 228
L+ AG +D G +FQ M ++ + + +++ L +R++D A++
Sbjct: 418 FIALLCACSHAGLVDEGLA-----MFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALA 472
Query: 229 YFKQMP 234
+ + MP
Sbjct: 473 FIENMP 478
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 180/622 (28%), Positives = 311/622 (50%), Gaps = 75/622 (12%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQS 65
+ ++ LF+ + + W +IR Y +G ++ F M ++ + V +++S
Sbjct: 56 LHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKS 115
Query: 66 DNV---QGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSW 117
+ E G +R D+ T N++++ Y ++E+ R
Sbjct: 116 CALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGR------------- 162
Query: 118 NLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQ 177
QR+ E F EM R + T+ V + E + RK+F+ MP KD+
Sbjct: 163 ----------QRLGAGE-VFDEMTERTRSVRTVSV---LSEDSV---RKIFEMMPEKDLV 205
Query: 178 AWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETC 237
+WN +IAG NG + ++M +L ++ ++ + IS K+
Sbjct: 206 SWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKE----- 260
Query: 238 EKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
I IR GL ++I +++I Y + V + +VF L+T
Sbjct: 261 ------IHGCSIRQGL------------DADIYVASSLIDMYAKCTRVADSCRVFTLLTE 302
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
RD WN +I G +N L +EGL+FF QM + P + +F+S++ C+ L TL LG+Q+
Sbjct: 303 RDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQL 362
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H + ++ ++++++ MYA+CGNI++A F + + D++SW ++I G A HG A
Sbjct: 363 HGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQA 422
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
A+ELFE+M K VL+ACS+ GLVD+ YF+ M + + P HY
Sbjct: 423 PDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAA 475
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPT--VWGALLGACRIHNNIKVGEIAGERVME 535
V DLLGR G ++EA + + G+ + PT +W LL ACR+H NI + E R++E
Sbjct: 476 VSDLLGRAGRLEEAYDFIC-----GMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILE 530
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
++PNN+G Y++L +Y + R ++A + A M+ G++K P CSWI++ + + F++GD
Sbjct: 531 VDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDE 590
Query: 596 SHPKFHRLRYLLNLLHTEIERE 617
SHP + ++R + +L +E+E
Sbjct: 591 SHPCYEKIREAMEVLVELMEKE 612
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 154/396 (38%), Gaps = 70/396 (17%)
Query: 243 SIISVLIRNGL-------VKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELM 295
+++ L+RN L ++ H+ + K+ S++ + + ++ Y + + ++++F +
Sbjct: 7 ALVKALLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTI 66
Query: 296 TTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGR 355
W +I + L + L F+ M SG PD+ F SVL C+ L L+LG
Sbjct: 67 HFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGE 126
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYAR-------------CGNIQSALLE---------- 392
+H I++ + NA++ MY++ G + + E
Sbjct: 127 SLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSV 186
Query: 393 ---------FSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVL 443
F +P D++SWN+II G A +G E+ L + M + KPD T VL
Sbjct: 187 LSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVL 246
Query: 444 S---------------ACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLG----- 483
CS +D Y + + Y R A V LL
Sbjct: 247 PLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGI 306
Query: 484 ----------RFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVG-EIAGER 532
+ GL DE + ++ I+ + +++ AC + +G ++ G
Sbjct: 307 SWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYI 366
Query: 533 VMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMK 568
N + L +MY CG AK+IF +M+
Sbjct: 367 TRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMR 402
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 47/204 (23%)
Query: 5 RIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM------PE--------- 49
R+ ++ +F + +RD ++WN +I G +NG D + F QM P+
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348
Query: 50 -------------------RDMFTYNTVIAGLM-----QSDNVQGAKEVFDGMEVRDVVT 85
R+ F N IA + + N++ AK++FD M +RD+V+
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS 408
Query: 86 WNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVIGALVNCQRMDLAESYFKEMG---- 141
W +MI G +G +A+ +F M + + + V+ A + +D A YF M
Sbjct: 409 WTAMIMGCALHGQAPDAIELFEQMETEGIKA---VLTACSHGGLVDEAWKYFNSMTRDFG 465
Query: 142 -ARDVASWTIMVNGLVREGRIVEA 164
A V + + + L R GR+ EA
Sbjct: 466 IAPGVEHYAAVSDLLGRAGRLEEA 489
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 185/621 (29%), Positives = 316/621 (50%), Gaps = 41/621 (6%)
Query: 15 KMPQRDTVTWNVMIRGYFKNGFLDNA----MCLFNQMPERDMFTYNTVIAGLM--QSDNV 68
K P T + +G + L + +C+ N D TYN+++ G+ + D+
Sbjct: 1906 KTPMSTTTKLDKDEKGSYPYACLSESPSIYVCVVNFYECFDGITYNSILFGVPSGREDHS 1965
Query: 69 QGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGM-PLKDVVSWNLVIGALVNC 127
A + ++ +V +WNS+I+ G EALR F + L + + + + +C
Sbjct: 1966 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 2025
Query: 128 QRM-DLAESYFKEMGA------RDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 180
+ DL A D+ + +++ + G++ +AR LFD++P ++V +W
Sbjct: 2026 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 2085
Query: 181 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKT 240
MI GY+ N A LF+ L ++ +G N+ +D+ +
Sbjct: 2086 SMITGYVQNEQADNALLLFKDF----LEEETEVEDG--NNVPLDSVVMV----------- 2128
Query: 241 WNSIISVLIR---NGLVKEAHSYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMT 296
S++S R G+ + H ++ K + +I ++ Y + G+ + KVF+ M
Sbjct: 2129 --SVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWME 2186
Query: 297 TRDVTVWNVMIFGLGENDLGEEGLKFFVQM-KESGPSPDNATFTSVLTICSDLPTLDLGR 355
+D WN MI ++ L E L+ F M + G + T ++VL C+ L G+
Sbjct: 2187 EKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGK 2246
Query: 356 QIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHG 415
IH Q IK+ V ++I MY +CG ++ A F + ++ SW +++ G HG
Sbjct: 2247 CIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHG 2306
Query: 416 YAEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHY 475
A++AL++F +M KP+ ITFV VL+ACS+AGLV++G ++F+ MK+KY ++P HY
Sbjct: 2307 RAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHY 2366
Query: 476 TCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME 535
C+VDL GR G ++EA NL+ ++ ++ VWG+LLGACRIH N+ +GEIA +++ E
Sbjct: 2367 GCMVDLFGRAGCLNEAYNLIKRMK---MKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE 2423
Query: 536 LEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDS 595
L+P+N G Y++L+ +Y GR D +R+ MK + K PG S +++ HVFL GD
Sbjct: 2424 LDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDK 2483
Query: 596 SHPKFHRLRYLLNLLHTEIER 616
HP + L L E+++
Sbjct: 2484 EHPHHEMIYKYLEKLTLELQK 2504
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 165/357 (46%), Gaps = 26/357 (7%)
Query: 159 GRIVEARKLFDKMPAKDVQAWNLMIAGYLDNG-------------CVGVAEDLFQKMHDR 205
GRI A LF ++ WNL+I NG C G+A D F
Sbjct: 73 GRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKF------ 126
Query: 206 DLTSWKQLINGLVNSRRIDAAI----SYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL 261
++ +I N ID S K N++I + G + A
Sbjct: 127 ---TFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVF 183
Query: 262 EKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLK 321
EK N+ SWT VI G G++ A ++F+ + +++V W MI G N EE L+
Sbjct: 184 EKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALE 243
Query: 322 FFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYA 381
F +M+ P+ T S++ C+++ L LGR IH AIK + A+I MY+
Sbjct: 244 LFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYS 303
Query: 382 RCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVG 441
+CG+I+ A+ F ++P + +WNS+I L HG ++AL LF M + KPD ITF+G
Sbjct: 304 KCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIG 363
Query: 442 VLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
VL AC + V +G YF M Y + P HY C+ +L R +DEA E+
Sbjct: 364 VLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 143/316 (45%), Gaps = 24/316 (7%)
Query: 3 NARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMP----ERDMFTYNTV 58
+ RI A LF ++ T TWN++IR NG + A+ L+ M D FT+ V
Sbjct: 72 HGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFV 131
Query: 59 IAGLMQSDNVQGAKEVFDGMEVR-----DVVTWNSMISGYVCNGLIDEALRVFHGMPLKD 113
I ++ K V G ++ DV N++I Y G AL+VF M +++
Sbjct: 132 IKACTNFLSIDLGK-VVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRN 190
Query: 114 VVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPA 173
VVSW VI L++C + A F E+ +++V SWT M+NG +R + EA +LF +M A
Sbjct: 191 VVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQA 250
Query: 174 KDVQAWNLMIAGYLDNGCVGVA-EDLFQKMHDRDLTSWKQ--------LINGLVNSRRID 224
+++ + L C + L + +HD + + + LI+ I
Sbjct: 251 ENIFPNEYTMVS-LIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIK 309
Query: 225 AAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIA----SWTNVIVGYF 280
AI F+ MP TWNS+I+ L +GL +EA + + N+ ++ V+
Sbjct: 310 DAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACV 369
Query: 281 EMGEVGSAIKVFELMT 296
+ V F MT
Sbjct: 370 HIKNVKEGCAYFTRMT 385
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 117/255 (45%), Gaps = 56/255 (21%)
Query: 4 ARIQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERD------------ 51
++++A+ LFD++P R+ V+W MI GY +N DNA+ LF E +
Sbjct: 2064 GQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLD 2123
Query: 52 ------MFTYNTVIAGLMQSDNVQG-----------------------------AKEVFD 76
+ + + ++G ++ V G +K+VFD
Sbjct: 2124 SVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFD 2183
Query: 77 GMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLVI--GALVNCQRMD--- 131
ME +D ++WNSMI+ Y +GL EAL VFHGM V +N V L+ C
Sbjct: 2184 WMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALR 2243
Query: 132 ----LAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYL 187
+ + K +V T +++ + GR+ A+K FD+M K+V++W M+AGY
Sbjct: 2244 AGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYG 2303
Query: 188 DNGCVGVAEDLFQKM 202
+G A D+F KM
Sbjct: 2304 MHGRAKEALDIFYKM 2318
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 160/383 (41%), Gaps = 69/383 (18%)
Query: 254 VKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGE 312
+++ H+ + + SN T ++ Y G + AI +F + WN++I
Sbjct: 43 LRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTI 102
Query: 313 NDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTV 372
N L E+ L + M G + D TF V+ C++ ++DLG+ +H IK + V
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162
Query: 373 SNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGL--------------------- 411
N +I Y +CG+ + AL F + + +++SW ++I GL
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222
Query: 412 -----AYHGY-----AEKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFD- 460
+GY E+ALELF+RM+ + P++ T V ++ AC+ G++ GR D
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282
Query: 461 ----CMKNKYFL-----------------------QPRSA--HYTCVVDLLGRFGLIDEA 491
C++ +L PR + + ++ LG GL EA
Sbjct: 283 AIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342
Query: 492 MNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVME---LEPNNSGVYLILT 548
+NL +E+ ++ + +L AC N+K G R+ + + P Y +T
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEH-YECMT 401
Query: 549 EMYLSCGRREDAKRIFAQMKENG 571
E+Y R + F KE G
Sbjct: 402 ELY---ARSNNLDEAFKSTKEVG 421
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 155/379 (40%), Gaps = 71/379 (18%)
Query: 71 AKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNL----------- 119
AK + G+ ++T +I Y +G I A+ +F+ + +WNL
Sbjct: 48 AKIIRSGLSNDQLLT-RKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLS 106
Query: 120 ------------------------VIGALVNCQRMDLAE----SYFKEMGARDVASWTIM 151
VI A N +DL + S K + DV +
Sbjct: 107 EQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNL 166
Query: 152 VNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWK 211
++ + G A K+F+KM ++V +W +I+G + G + A +F ++ +++ SW
Sbjct: 167 IDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWT 226
Query: 212 QLINGLVNSRRIDAAISYFKQMPE----TCEKTWNSIISVLIRNGLV---KEAHSYLEKY 264
+ING + +++ + A+ FK+M E T S+I G++ + H Y K
Sbjct: 227 AMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKN 286
Query: 265 PYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFF 323
+ T +I Y + G + AI+VFE M + + WN MI LG + LG+E L F
Sbjct: 287 CIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLF 346
Query: 324 VQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSN--------- 374
+M+ PD TF VL C +H + +K FT ++
Sbjct: 347 SEMERVNVKPDAITFIGVLCAC-----------VHIKNVKEGCAYFTRMTQHYGIAPIPE 395
Query: 375 ---AMITMYARCGNIQSAL 390
M +YAR N+ A
Sbjct: 396 HYECMTELYARSNNLDEAF 414
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 189/679 (27%), Positives = 318/679 (46%), Gaps = 99/679 (14%)
Query: 2 RNARIQEAQNLFDKMP---QRDTVTWNVMIRGYFKNGFLDNAMCLFNQMPERDM----FT 54
++ + +A+++F+ M +RD V+W+ M+ + NG +A+ LF + E + +
Sbjct: 109 KSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYC 168
Query: 55 YNTVIAGLMQSDNV-------------------------------------QGAKEVFDG 77
Y VI SD V + A +VFD
Sbjct: 169 YTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 78 MEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLA 133
M +VVTW MI+ + G EA+R F M L D + + V A + + L
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 134 ESYFKEMGARDVASWTI--------------MVNGLVREGRIVEARKLFDKMPAKDVQAW 179
R + SW I M +G + + RK+FD+M V +W
Sbjct: 289 ---------RQLHSWAIRSGLADDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSW 339
Query: 180 NLMIAGYLDNGCVGV-AEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCE 238
+I GY+ N + A +LF +M + G V + S FK +
Sbjct: 340 TALITGYMQNCNLATEAINLFSEM----------ITQGHVEPNHFTFS-SAFKACGNVSD 388
Query: 239 -KTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTT 297
+ ++ + GL + + + + A FE ++
Sbjct: 389 PRVGKQVLGHAFKRGLASNSSVSNSVISM------------FVKCDRMEDARTAFESLSE 436
Query: 298 RDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQI 357
+++ +N + G N E + ++ E TF S+L+ +++ +L G QI
Sbjct: 437 KNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQI 496
Query: 358 HAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYA 417
H+Q +K+ + V NA+I+MY++CG+I +A FS + ++ISW S+I G A HG+A
Sbjct: 497 HSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFA 556
Query: 418 EKALELFERMRLTDFKPDDITFVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTC 477
E+ LE F +M KP+++T+V +LSACS+ GLV +G +F+ M + ++P+ HY C
Sbjct: 557 ERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC 616
Query: 478 VVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELE 537
+VDLL R GL+ +A +N + + VW LGACR+H+N ++G++A +++E +
Sbjct: 617 MVDLLCRAGLLTDAFEFINTM---PFQADVLVWRTFLGACRVHSNTELGKLAARKILEFD 673
Query: 538 PNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSH 597
PN Y+ L+ +Y S G+ E++ + +MKE + KE GCSWI++ D H F GD+SH
Sbjct: 674 PNEPAAYIQLSNIYASAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSH 733
Query: 598 PKFHRLRYLLNLLHTEIER 616
P H++ L+ L TEI+R
Sbjct: 734 PNAHQIYDELDWLITEIKR 752
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 125/560 (22%), Positives = 234/560 (41%), Gaps = 85/560 (15%)
Query: 14 DKMPQRDTVTWNVMIRG-----YFKNGFLDNAMCLFNQMPERDMFTYNTVIAGLMQSDNV 68
D + D+VT++ +++ +F+ G L +A + ++ E D YN++I+ +S ++
Sbjct: 55 DGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEI-EPDSVLYNSLISLYSKSGDL 113
Query: 69 QGAKEVFDGME---VRDVVTWNSMISGYVCNGLIDEALRVF-----HGMPLKDVVSWNLV 120
AK+VF+ M RDVV+W++M++ + NG +A+++F G+ D + V
Sbjct: 114 TKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYC-YTAV 172
Query: 121 IGALVNCQRMDLAE---SYFKEMG--ARDVASWTIMVNGLVR-EGRIVEARKLFDKMPAK 174
I A N + + + + G DV +++ V+ E A K+FDKM
Sbjct: 173 IRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL 232
Query: 175 DVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMP 234
+V W LMI + G A F M S K ++ + ++ +S +Q+
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQL- 291
Query: 235 ETCEKTWNSIISVLIRNGLVKEAHSYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFEL 294
+W IR+GL + S ++ G V KVF+
Sbjct: 292 ----HSW------AIRSGLADDVE-----------CSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 295 MTTRDVTVWNVMIFGLGEN-DLGEEGLKFFVQMKESGP-SPDNATFTSVLTICSDLPTLD 352
M V W +I G +N +L E + F +M G P++ TF+S C ++
Sbjct: 331 MQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPR 390
Query: 353 LGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPIHDIISWNSIICGLA 412
+G+Q+ A K ++VSN++I+M+ +C ++ A F S+ +++S+N+ + G
Sbjct: 391 VGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTC 450
Query: 413 YHGYAEKALELFERMRLTDFKPDDITFVGVLS-----------------------AC--- 446
+ E A EL + + TF +LS +C
Sbjct: 451 RNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQP 510
Query: 447 ---------SYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNE 497
S G +D F M N+ + +T ++ + G + + N+
Sbjct: 511 VCNALISMYSKCGSIDTASRVFSLMDNRNVIS-----WTSMITGFAKHGFAERVLETFNQ 565
Query: 498 IRADGIEVSPTVWGALLGAC 517
+ +G++ + + A+L AC
Sbjct: 566 MTKEGVKPNEVTYVAILSAC 585
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 161/380 (42%), Gaps = 51/380 (13%)
Query: 240 TWNSIISVLIRNG---LVKEAHSYLEKYPYSNIASWTNVIVG-YFEMGEVGSAIKVFELM 295
T++S++ IR L K H+ L ++ + N ++ Y + G++ A VFE M
Sbjct: 64 TFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETM 123
Query: 296 T---TRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLD 352
RDV W+ M+ G N + +K FV+ E G P++ +T+V+ CS+ +
Sbjct: 124 GRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVG 183
Query: 353 LGRQIHAQAIKIARNQF-TTVSNAMITMYARCGN-IQSALLEFSSVPIHDIISWNSIICG 410
+GR I +K + V ++I M+ + N ++A F + ++++W +I
Sbjct: 184 VGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 411 LAYHGYAEKALELFERMRLTDFKPDDITFVGVLSACS----------------------- 447
G+ +A+ F M L+ F+ D T V SAC+
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADD 303
Query: 448 --------YA-----GLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNL 494
YA G VD R FD M++ + + + + L EA+NL
Sbjct: 304 VECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVM----SWTALITGYMQNCNLATEAINL 359
Query: 495 LNEIRADG-IEVSPTVWGALLGACRIHNNIKVG-EIAGERVMELEPNNSGVYLILTEMYL 552
+E+ G +E + + + AC ++ +VG ++ G +NS V + M++
Sbjct: 360 FSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFV 419
Query: 553 SCGRREDAKRIFAQMKENGV 572
C R EDA+ F + E +
Sbjct: 420 KCDRMEDARTAFESLSEKNL 439
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 182/659 (27%), Positives = 315/659 (47%), Gaps = 73/659 (11%)
Query: 6 IQEAQNLFDKMPQRDTVTWNVMIRGYFKNGFLDNAMCLFNQM----PERDMFTYNTVI-- 59
+ A+ LFD+MP+R+ V++ +++ + + G + A LF ++ E + F T++
Sbjct: 112 LASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKL 171
Query: 60 -----------------------------AGLMQSDN----VQGAKEVFDGMEVRDVVTW 86
+GL+ + + V A+ VF+G+ +D V W
Sbjct: 172 AIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVW 231
Query: 87 NSMISGYVCNGLIDEALRVFHGMPLK----DVVSWNLVIGALVNCQRMDLAESY----FK 138
+M+S Y N + A RVF M + + + V+ A V + L + K
Sbjct: 232 TAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIK 291
Query: 139 EMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDL 198
+ + +++ + G I +AR F+ +P DV + MI+ Y + A +L
Sbjct: 292 TLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFEL 351
Query: 199 FQKMHDRDLTSWKQLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
F ++ + + ++ ++ + + + KQ I N +K H
Sbjct: 352 FLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQ----------------IHNHAIKIGH 395
Query: 259 SYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEE 318
S++ ++ Y + ++ S++K+F + + WN ++ G ++ LGEE
Sbjct: 396 E-------SDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEE 448
Query: 319 GLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMIT 378
L F +M+ + T++SVL C+ ++ QIH K N T + N++I
Sbjct: 449 ALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLID 508
Query: 379 MYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDIT 438
YA+CG I+ AL F + DIISWN+II G A HG A ALELF+RM ++ + +DIT
Sbjct: 509 TYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDIT 568
Query: 439 FVGVLSACSYAGLVDQGRYYFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEI 498
FV +LS CS GLV+ G FD M+ + ++P HYTC+V LLGR G +++A+ + +I
Sbjct: 569 FVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDI 628
Query: 499 RADGIEVSPTVWGALLGACRIHNNIKVGEIAGERVMELEPNNSGVYLILTEMYLSCGRRE 558
+ S VW ALL +C IH N+ +G + E+++E+EP + Y++L+ MY + G +
Sbjct: 629 PS---APSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLD 685
Query: 559 DAKRIFAQMKENGVKKEPGCSWIQINDGGHVFLSGDSSHPKFHRLRYLLNLLHTEIERE 617
+ M+ GV+K PG SW++I H F G HP + +L L+ + RE
Sbjct: 686 QVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSRE 744
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 200/466 (42%), Gaps = 58/466 (12%)
Query: 140 MGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLF 199
+G D+ +++N + G + AR+LFD+MP +++ ++ ++ + G A LF
Sbjct: 91 VGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALF 150
Query: 200 QKMHDRDLTSWK-QLINGLVNSRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAH 258
+++ W+ +N V + + AI+ + GL H
Sbjct: 151 RRLR------WEGHEVNQFVLTTMLKLAIA-------------------MDAAGLAGGVH 185
Query: 259 SYLEKYPYS-NIASWTNVIVGYFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGE 317
S K + N + +I Y V A VF + +D VW M+ END E
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245
Query: 318 EGLKFFVQMKESGPSPDNATFTSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMI 377
+ F +M+ SG P+ TSVL LP++ LG+ IH AIK + V A++
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305
Query: 378 TMYARCGNIQSALLEFSSVPIHDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDI 437
MYA+CG+I+ A L F +P D+I + +I A E+A ELF R+ + P++
Sbjct: 306 DMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEY 365
Query: 438 TFVGVLSACSYAGLVDQGR-----------------------YYFDC----MKNKYFLQP 470
+ VL AC+ +D G+ +Y C K F
Sbjct: 366 SLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 425
Query: 471 RSAH---YTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGACRIHNNIK-VG 526
R A+ + +V + GL +EA+++ E++A + + + ++L AC +I+ G
Sbjct: 426 RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAG 485
Query: 527 EIAGERVMELEPNNSGVYLILTEMYLSCGRREDAKRIFAQMKENGV 572
+I N++ + L + Y CG DA ++F + E +
Sbjct: 486 QIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDI 531
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 214/483 (44%), Gaps = 46/483 (9%)
Query: 51 DMFTYNTVIAGLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMP 110
D+F N ++ + + A+ +FD M R++V++ +++ + G + A +F +
Sbjct: 95 DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154
Query: 111 LKDVVSWNLVIGALVNCQRMDLAESYFKEMGARDVASWTIM--VNGLVREGRI------- 161
+ V+ ++ ++ +A G +W + N V G I
Sbjct: 155 WEGHEVNQFVLTTML---KLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCS 211
Query: 162 --VEARKLFDKMPAKDVQAWNLMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVN 219
+A +F+ + KD W M++ Y +N C A +F KM ++ K N
Sbjct: 212 LVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMR---VSGCKP--NPFAL 266
Query: 220 SRRIDAAISYFKQMPETCEKTWNSIISVLIRNGLVKEAHSYL-EKYPYSNIASWTNVIVG 278
+ + AA+ +P SV++ G+ A L + P+ A ++
Sbjct: 267 TSVLKAAVC----LP-----------SVVLGKGIHGCAIKTLNDTEPHVGGA----LLDM 307
Query: 279 YFEMGEVGSAIKVFELMTTRDVTVWNVMIFGLGENDLGEEGLKFFVQMKESGPSPDNATF 338
Y + G++ A FE++ DV + + MI +++ E+ + F+++ S P+ +
Sbjct: 308 YAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSL 367
Query: 339 TSVLTICSDLPTLDLGRQIHAQAIKIARNQFTTVSNAMITMYARCGNIQSALLEFSSVPI 398
+SVL C+++ LD G+QIH AIKI V NA++ YA+C ++ S+L FSS+
Sbjct: 368 SSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRD 427
Query: 399 HDIISWNSIICGLAYHGYAEKALELFERMRLTDFKPDDITFVGVLSAC-SYAGLVDQGRY 457
+ +SWN+I+ G + G E+AL +F M+ +T+ VL AC S A + G+
Sbjct: 428 ANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQI 487
Query: 458 YFDCMKNKYFLQPRSAHYTCVVDLLGRFGLIDEAMNLLNEIRADGIEVSPTVWGALLGAC 517
+ C K + ++D + G I +A+ + + +E W A++
Sbjct: 488 H--CSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL----MERDIISWNAIISGY 541
Query: 518 RIH 520
+H
Sbjct: 542 ALH 544
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,003,157,527
Number of Sequences: 23463169
Number of extensions: 424762918
Number of successful extensions: 1250278
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7284
Number of HSP's successfully gapped in prelim test: 4400
Number of HSP's that attempted gapping in prelim test: 959572
Number of HSP's gapped (non-prelim): 81283
length of query: 624
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 475
effective length of database: 8,863,183,186
effective search space: 4210012013350
effective search space used: 4210012013350
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 80 (35.4 bits)