Your job contains 1 sequence.
>006963
MLLLSATAVTPKTPLSKDHTCCLLFCPNYHPKFCASLNPKPLTTSPKSLSSNGTSLRHVT
RTLSNDDEPPAAGSPMVSSASAVASAIRRTSTSPIEFLQTIETDQKRCNLVLPSPDFQRL
CVEQLHLFRRIVDPDAVLSVYVRPAGSYVMDRLELRRVVSYPGVNATDIVVLVGNFNMPA
GLRAAEAALSSQQVQVVPEQRAVVFPMVKHPFVVGFLVAELPLMELQMCGTEEPDAAIGF
QSSEEVYAFPPSFDTESHAIESFDHERMRVYKFSADQRLNAINICRSLAMAYVMDQKSML
LQQSSWQNNARMSNLVEQIRGPLSSIQTLSKMLSLHMKRSEISYDIVEDIMVQGDRLRGT
LQELQDAVFLTKANIVRYNEETLKKMNNSAYSHPESIRSQLSNNFSRENSGNKLQNSCKP
LSLDTPAKDIEMPMPPLALAPLKQNGIRPCNVSDVLGDLFEAVRPLAHMQQRQVELSELS
QSLLVAVEEPALRQALSNLIEGALMRTQVGGKVEIVSAAAPAGDALVVIDDDGPDMHYMT
QMHSLTPFGSELFSENMVEDNMTWNFVAGLTVARELLESYGCVVRVISPWKTDAALGSGG
TRVELWLPSPAPLSDLNGKSNET
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006963
(623 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2008525 - symbol:CSK "chloroplast sensor kinas... 1612 1.1e-165 1
>TAIR|locus:2008525 [details] [associations]
symbol:CSK "chloroplast sensor kinase" species:3702
"Arabidopsis thaliana" [GO:0000155 "phosphorelay sensor kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0016301 "kinase activity" evidence=IDA] [GO:0046777 "protein
autophosphorylation" evidence=RCA;IDA] [GO:0080005 "photosystem
stoichiometry adjustment" evidence=IMP] [GO:0009637 "response to
blue light" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR003594 InterPro:IPR003661 Pfam:PF02518
SMART:SM00387 SMART:SM00388 EMBL:CP002684 GO:GO:0005524
GO:GO:0009570 GO:GO:0016020 GO:GO:0046777 GO:GO:0016301
GO:GO:0023014 GO:GO:0000155 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0000160 GO:GO:0010468 GO:GO:0080005 IPI:IPI00528640
RefSeq:NP_564908.1 UniGene:At.26196 ProteinModelPortal:F4HVG8
PRIDE:F4HVG8 EnsemblPlants:AT1G67840.1 GeneID:843110
KEGG:ath:AT1G67840 OMA:EDNMTWN Uniprot:F4HVG8
Length = 611
Score = 1612 (572.5 bits), Expect = 1.1e-165, P = 1.1e-165
Identities = 351/608 (57%), Positives = 424/608 (69%)
Query: 27 PNYHPKFCASL-NPKP-------LTTSPKSLSSNGTS-----LRHVTRTLSNDDEPXXXX 73
PN H F S+ NP+P L S S SS+ +S LR+V T+SN++
Sbjct: 16 PNLH--FSNSIPNPRPSNPSLKLLNASSSSSSSSSSSIFTRGLRYVNHTVSNEESEPGGG 73
Query: 74 XXXXXXXXXXXXXXXXXXXXPIEFLQTIETDQKRCNLVLPSPDFQRLCVEQLHLFRRIVD 133
P+EF Q IE D + ++LPSPDFQRLC+EQL LFR+IVD
Sbjct: 74 ETMVASASAIASAIRGASTTPVEFTQMIEKDHLKTKIILPSPDFQRLCLEQLDLFRQIVD 133
Query: 134 PDAVLSVYVRPAGSYVMDRLELRRVVSYPGVNATDIVVLVGNFNMPAGLRAAEAALSSQQ 193
P+AVLS+YVRPAGSYVMDRLELRRV YP VNA D+V+LVGNF +PAGLRAAEA+LSSQQ
Sbjct: 134 PNAVLSIYVRPAGSYVMDRLELRRVTCYPSVNAGDVVILVGNFGIPAGLRAAEASLSSQQ 193
Query: 194 VQVVPEQRAVVFPMVKHPFVVGFLVAELPLM---ELQMCGTEEPDAAIGFQSSEEVYAFP 250
V++V + RA VFPMVKHPFVVGFLVAELP+ E + E+P F S EE YA P
Sbjct: 194 VELVSKHRAAVFPMVKHPFVVGFLVAELPVEAEEEEEEEEEEKPHGVNQFLSPEEAYALP 253
Query: 251 PSFDTESHAIESFDHERMRVYKFSADQRLNAINICRSLAMAYVMDQKSMLLQQSSWQNNA 310
S +T+S ++ ++V F+ +QR AINI R+LAMAYVMDQK+MLLQQSSWQNN
Sbjct: 254 ASANTKSPRVKL---PSVKV--FTEEQRSYAINISRTLAMAYVMDQKTMLLQQSSWQNNV 308
Query: 311 RMSNLVEQIRGPLSSIQTLSKMLSLHMKRSEISYDIVEDIMVQGDRLRGTLQELQDAVFL 370
RMS LVEQIRGPLS+++TLSKMLS H KR++IS+DIVED++VQGD+++ TL+ELQDAV L
Sbjct: 309 RMSKLVEQIRGPLSTMRTLSKMLSTHTKRNQISHDIVEDLIVQGDQIKDTLEELQDAVHL 368
Query: 371 TKANIVRYNEETLKKMNNSAYSHPESIRSQLSNNFSRENSGNKLQNSCKPLSLDTPAKDI 430
TKANIVR+NEE LKK+N + H E+ RS+ + + S Q S LSL + D
Sbjct: 369 TKANIVRHNEEALKKINKT---HNETRRSKYEHKDPIDGS----QISSTRLSLGSGLDDS 421
Query: 431 EXXXXXXXXXXXKQNGIRPCNVSDVLGDLFEAVRPLAHMXXXXXXXXXXXXXXXXXXXXP 490
E + + IRPC++S+VL D+ E VRPLA P
Sbjct: 422 EMPMPPLALAPLQMHSIRPCDISNVLLDMVETVRPLALTQQRVVELGENSASLQVAVEEP 481
Query: 491 ALRQALSNLIEGALMRTQVGGKVEIVSAAAPAGDALVVIDDDGPDMHYMTQMHSLTPFGS 550
ALRQALSNLIEGAL+RT VGGKVEI+S APAG +LVVIDDDGPDM YMTQMHSLTPFG+
Sbjct: 482 ALRQALSNLIEGALLRTHVGGKVEILSTRAPAGGSLVVIDDDGPDMRYMTQMHSLTPFGA 541
Query: 551 ELFSENMVEDNMTWNFVAGLTVARELLESYGCVVRVISPWKTDAALGSGGTRVELWLPS- 609
EL SENMVEDNMTWNFVAGLTVARE+LESYGCV+RVISP +DAALG+GGTRVELWLP+
Sbjct: 542 ELLSENMVEDNMTWNFVAGLTVAREILESYGCVIRVISPRSSDAALGAGGTRVELWLPAF 601
Query: 610 PAPLSDLN 617
PA +S+ N
Sbjct: 602 PAAVSEAN 609
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 623 568 0.00079 120 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 621 (66 KB)
Total size of DFA: 307 KB (2159 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 47.43u 0.08s 47.51t Elapsed: 00:00:02
Total cpu time: 47.44u 0.08s 47.52t Elapsed: 00:00:02
Start: Sat May 11 06:42:10 2013 End: Sat May 11 06:42:12 2013