BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006968
(623 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 471 bits (1211), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/341 (68%), Positives = 272/341 (79%), Gaps = 5/341 (1%)
Query: 264 RYRHNQQIFFDVNDQYDPEVSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFS 323
R + Q FFDV + DPEV LG LKR++ +EL+ A+ NFS KNILGRGGFG VYKG +
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 324 DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNG 383
DG LVAVKRLK+ GGE+QFQTEVE IS+AVHRNLLRL GFC T ERLLVYPYM NG
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 384 SVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE 443
SVAS LR+ +P LDW +R+RIALG+ARGL YLH+ CDPKIIHRDVKAANILLDE+FE
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 444 AVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
AVVGDFGLAKL+D++D HV AVRGT+GHIAPEYLSTG+SSEKTDVFG+G++LLELITGQ
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 240
Query: 504 RALDFGRAANQRGVM-LDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFN 562
RA D R AN VM LDWVK L +E KL +VD DL+GN+ E+E+++QVALLCTQ +
Sbjct: 241 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 300
Query: 563 PLHRPKMSEVLKMLEGDGLAEKWEASQKIETPR----YRTH 599
P+ RPKMSEV++MLEGDGLAE+WE QK E R Y TH
Sbjct: 301 PMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNYPTH 341
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 464 bits (1193), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/325 (69%), Positives = 264/325 (81%), Gaps = 1/325 (0%)
Query: 272 FFDVNDQYDPEVSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVK 331
FFDV + DPEV LG LKR++ +EL+ A+ NF KNILGRGGFG VYKG +DG LVAVK
Sbjct: 1 FFDVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK 60
Query: 332 RLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRD 391
RLK+ GGE+QFQTEVE IS+AVHRNLLRL GFC T ERLLVYPYM NGSVAS LR+
Sbjct: 61 RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120
Query: 392 HIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGL 451
+P LDW +R+RIALG+ARGL YLH+ CDPKIIHRDVKAANILLDE+FEAVVGDFGL
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 452 AKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRA 511
AKL+D++D HV AVRG +GHIAPEYLSTG+SSEKTDVFG+G++LLELITGQRA D R
Sbjct: 181 AKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
Query: 512 ANQRGVM-LDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMS 570
AN VM LDWVK L +E KL +VD DL+GN+ E+E+++QVALLCTQ +P+ RPKMS
Sbjct: 241 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300
Query: 571 EVLKMLEGDGLAEKWEASQKIETPR 595
EV++MLEGDGLAE+WE QK E R
Sbjct: 301 EVVRMLEGDGLAERWEEWQKEEMFR 325
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 168/293 (57%), Gaps = 14/293 (4%)
Query: 290 RYTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEV 349
R +L AT+NF K ++G G FG VYKG DGA VA+KR + + G +F+TE+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEI 86
Query: 350 ETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP----ALDWARRK 405
ET+S H +L+ L GFC NE +L+Y YM NG+ L+ H++G ++ W +R
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN----LKRHLYGSDLPTMSMSWEQRL 142
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTT 464
I +G ARGL YLH + IIHRDVK+ NILLDE+F + DFG++K D +H+
Sbjct: 143 EICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXX 199
Query: 465 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
V+GT+G+I PEY G+ +EK+DV+ FG++L E++ + A+ + + +W +
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVE 258
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
H G+L Q+VD +L L + A+ C + RP M +VL LE
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 168/293 (57%), Gaps = 14/293 (4%)
Query: 290 RYTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEV 349
R +L AT+NF K ++G G FG VYKG DGA VA+KR + + G +F+TE+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEI 86
Query: 350 ETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP----ALDWARRK 405
ET+S H +L+ L GFC NE +L+Y YM NG+ L+ H++G ++ W +R
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN----LKRHLYGSDLPTMSMSWEQRL 142
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL-LDHRDSHVTT 464
I +G ARGL YLH + IIHRDVK+ NILLDE+F + DFG++K + +H+
Sbjct: 143 EICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXX 199
Query: 465 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
V+GT+G+I PEY G+ +EK+DV+ FG++L E++ + A+ + + +W +
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVE 258
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
H G+L Q+VD +L L + A+ C + RP M +VL LE
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 168/306 (54%), Gaps = 19/306 (6%)
Query: 282 EVSLGHLKRYTFKELRAATSNFSAK------NILGRGGFGIVYKGCFSDGALVAVKRLK- 334
EVS ++F EL+ T+NF + N +G GGFG+VYKG + + VAVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAA 64
Query: 335 --DYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH 392
D + QF E++ ++ H NL+ L GF S ++ LVY YMPNGS+ RL
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS-C 123
Query: 393 IHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452
+ G P L W R +IA G A G+ +LHE IHRD+K+ANILLDE F A + DFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 453 KLLDHRDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRA 511
+ + V + + GT ++APE L G+ + K+D++ FG++LLE+ITG A+D R
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 512 ANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSE 571
+ ++ + +E + +DK + + D +E M VA C RP + +
Sbjct: 240 P--QLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 572 VLKMLE 577
V ++L+
Sbjct: 297 VQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 167/306 (54%), Gaps = 19/306 (6%)
Query: 282 EVSLGHLKRYTFKELRAATSNFSAK------NILGRGGFGIVYKGCFSDGALVAVKRLK- 334
EVS ++F EL+ T+NF + N +G GGFG+VYKG + + VAVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAA 64
Query: 335 --DYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH 392
D + QF E++ ++ H NL+ L GF S ++ LVY YMPNGS+ RL
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS-C 123
Query: 393 IHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452
+ G P L W R +IA G A G+ +LHE IHRD+K+ANILLDE F A + DFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 453 KLLDHRDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRA 511
+ + V + GT ++APE L G+ + K+D++ FG++LLE+ITG A+D R
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 512 ANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSE 571
+ ++ + +E + +DK + + D +E M VA C RP + +
Sbjct: 240 P--QLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 572 VLKMLE 577
V ++L+
Sbjct: 297 VQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 166/305 (54%), Gaps = 19/305 (6%)
Query: 283 VSLGHLKRYTFKELRAATSNFSAK------NILGRGGFGIVYKGCFSDGALVAVKRLK-- 334
VS ++F EL+ T+NF + N +G GGFG+VYKG + + VAVK+L
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAM 59
Query: 335 -DYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHI 393
D + QF E++ ++ H NL+ L GF S ++ LVY YMPNGS+ RL +
Sbjct: 60 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS-CL 118
Query: 394 HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453
G P L W R +IA G A G+ +LHE IHRD+K+ANILLDE F A + DFGLA+
Sbjct: 119 DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 175
Query: 454 LLDHRDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAA 512
+ V + GT ++APE L G+ + K+D++ FG++LLE+ITG A+D R
Sbjct: 176 ASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREP 234
Query: 513 NQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEV 572
+ ++ + +E + +DK + + D +E M VA C RP + +V
Sbjct: 235 --QLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
Query: 573 LKMLE 577
++L+
Sbjct: 292 QQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 159/297 (53%), Gaps = 19/297 (6%)
Query: 291 YTFKELRAATSNFSAK------NILGRGGFGIVYKGCFSDGALVAVKRLK---DYNIAGG 341
++F EL+ T+NF + N G GGFG+VYKG + + VAVK+L D
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 342 EVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDW 401
+ QF E++ + H NL+ L GF S ++ LVY Y PNGS+ RL + G P L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLS-CLDGTPPLSW 123
Query: 402 ARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH 461
R +IA G A G+ +LHE IHRD+K+ANILLDE F A + DFGLA+ +
Sbjct: 124 HXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 462 VTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD 520
V + + GT + APE L G+ + K+D++ FG++LLE+ITG A+D R + ++
Sbjct: 181 VXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLDI 237
Query: 521 WVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ +E + +DK + D +E VA C RP + +V ++L+
Sbjct: 238 KEEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ YL +
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLASK- 171
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL---DHRDSHVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 172 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMT 251
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ YL +
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLASK- 144
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL---DHRDSHVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 145 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMT 224
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ YL +
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLASK- 170
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL---DHRDSHVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 171 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMT 250
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ YL +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLASK- 152
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL---DHRDSHVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT 232
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ YL +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLASK- 152
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL---DHRDSHVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ YL +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLASK- 151
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL---DHRDSHVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 152 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMT 231
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ YL +
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLASK- 147
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL---DHRDSHVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 148 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMT 227
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ YL +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLASK- 151
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDS---HVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 152 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMT 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ YL +
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLASK- 149
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL---DHRDSHVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 150 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMT 229
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ YL +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKYLASK- 150
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL---DHRDSHVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 151 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMT 230
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 106/202 (52%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ +L +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKFLASK- 153
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAK-LLDHR-DS-HVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ +LD DS H T + V +A E L
Sbjct: 154 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMT 233
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ +L +
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKFLASK- 211
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD---SHVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 212 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMT 291
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ +L +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKFLASK- 150
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD---SHVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 151 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMT 230
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 5/204 (2%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEV-QFQTEVETISLAVHRNL 360
+ + K +G G FG V++ + G+ VAVK L + + V +F EV + H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 361 LRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
+ G + +V Y+ GS+ RL R LD RR +A A+G+ YLH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSL-YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST 480
+ +P I+HRD+K+ N+L+D+ + V DFGL++L A GT +APE L
Sbjct: 156 R-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA-GTPEWMAPEVLRD 213
Query: 481 GQSSEKTDVFGFGILLLELITGQR 504
S+EK+DV+ FG++L EL T Q+
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQ 237
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ +L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKFLASK- 152
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD---SHVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT 232
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ +L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKFLASK- 152
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD---SHVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ +L +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKFLASK- 153
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD---SHVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 154 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMT 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 308 ILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
++GRG FG VY G +DG + AVK L G QF TE + H N+L L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 364 CGFC-STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C +E L+V PYM +G + + +R+ H D L A+G+ +L +
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQVAKGMKFLASK- 157
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD---SHVTTAVRGTVGHIAPEYLS 479
K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 158 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
T + + K+DV+ FG+LL EL+T
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMT 237
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 5/204 (2%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEV-QFQTEVETISLAVHRNL 360
+ + K +G G FG V++ + G+ VAVK L + + V +F EV + H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 361 LRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
+ G + +V Y+ GS+ RL R LD RR +A A+G+ YLH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST 480
+ +P I+HR++K+ N+L+D+ + V DFGL++L +A GT +APE L
Sbjct: 156 R-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA-GTPEWMAPEVLRD 213
Query: 481 GQSSEKTDVFGFGILLLELITGQR 504
S+EK+DV+ FG++L EL T Q+
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQ 237
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 143/299 (47%), Gaps = 52/299 (17%)
Query: 299 ATSNFSAKNILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAG---GEV-------QFQT 347
A + + +G+GGFG+V+KG D ++VA+K L I G GE +FQ
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL----ILGDSEGETEMIEKFQEFQR 72
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRI 407
EV +S H N+++L G N +V ++P G + RL D H + W+ + R+
Sbjct: 73 EVFIMSNLNHPNIVKLYGL--MHNPPRMVMEFVPCGDLYHRLLDKAH---PIKWSVKLRL 127
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANIL---LDEDFE--AVVGDFGLAKLLDHRDSHV 462
L A G+ Y+ Q +P I+HRD+++ NI LDE+ A V DFGL++ + H
Sbjct: 128 MLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHS 182
Query: 463 TTAVRGTVGHIAPEYLSTGQSS--EKTDVFGFGILLLELITGQRALD---FGRAANQRGV 517
+ + G +APE + + S EK D + F ++L ++TG+ D +G+
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK------- 235
Query: 518 MLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+ ++ + +EG L + +D + V LC +P RP S ++K L
Sbjct: 236 -IKFINMIREEG-LRPTIPEDCP--------PRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 142/299 (47%), Gaps = 52/299 (17%)
Query: 299 ATSNFSAKNILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAG---GEV-------QFQT 347
A + + +G+GGFG+V+KG D ++VA+K L I G GE +FQ
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL----ILGDSEGETEMIEKFQEFQR 72
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRI 407
EV +S H N+++L G N +V ++P G + RL D H + W+ + R+
Sbjct: 73 EVFIMSNLNHPNIVKLYGL--MHNPPRMVMEFVPCGDLYHRLLDKAH---PIKWSVKLRL 127
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANIL---LDEDFE--AVVGDFGLAKLLDHRDSHV 462
L A G+ Y+ Q +P I+HRD+++ NI LDE+ A V DFG ++ + H
Sbjct: 128 MLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHS 182
Query: 463 TTAVRGTVGHIAPEYLSTGQSS--EKTDVFGFGILLLELITGQRALD---FGRAANQRGV 517
+ + G +APE + + S EK D + F ++L ++TG+ D +G+
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK------- 235
Query: 518 MLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+ ++ + +EG L + +D + V LC +P RP S ++K L
Sbjct: 236 -IKFINMIREEG-LRPTIPEDCP--------PRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 142/299 (47%), Gaps = 52/299 (17%)
Query: 299 ATSNFSAKNILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAG---GEV-------QFQT 347
A + + +G+GGFG+V+KG D ++VA+K L I G GE +FQ
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL----ILGDSEGETEMIEKFQEFQR 72
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRI 407
EV +S H N+++L G N +V ++P G + RL D H + W+ + R+
Sbjct: 73 EVFIMSNLNHPNIVKLYGL--MHNPPRMVMEFVPCGDLYHRLLDKAH---PIKWSVKLRL 127
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANIL---LDEDFE--AVVGDFGLAKLLDHRDSHV 462
L A G+ Y+ Q +P I+HRD+++ NI LDE+ A V DF L++ + H
Sbjct: 128 MLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHS 182
Query: 463 TTAVRGTVGHIAPEYLSTGQSS--EKTDVFGFGILLLELITGQRALD---FGRAANQRGV 517
+ + G +APE + + S EK D + F ++L ++TG+ D +G+
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK------- 235
Query: 518 MLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+ ++ + +EG L + +D + V LC +P RP S ++K L
Sbjct: 236 -IKFINMIREEG-LRPTIPEDCP--------PRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 75
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R ++ +A + + YL
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE 133
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 134 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 234
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 75
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R ++ +A + + YL
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE 133
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 134 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 190
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 234
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 139/293 (47%), Gaps = 25/293 (8%)
Query: 286 GHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQ 344
GH+ + + ++ + K+ LG G +G VY+G + +L VAVK LK+ + E
Sbjct: 1 GHMSP-NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-- 57
Query: 345 FQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARR 404
F E + H NL++L G C+ E ++ +M G++ LR+ R ++
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVL 115
Query: 405 KRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTT 464
+A + + YL ++ IHRD+ A N L+ E+ V DFGL++L+
Sbjct: 116 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA 172
Query: 465 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
+ + APE L+ + S K+DV+ FG+LL E+ T +G + G+ L
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL----- 220
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
++ ++++KD + E++ ++ C Q+NP RP +E+ + E
Sbjct: 221 ----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 75
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R ++ +A + + YL
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE 133
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 134 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 234
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 71
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R ++ +A + + YL
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE 129
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 130 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 186
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 230
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 231 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 71
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R ++ +A + + YL
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE 129
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 130 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLA 186
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 230
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 231 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 74
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R ++ +A + + YL
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE 132
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 133 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 189
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 190 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 233
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 234 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 70
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R ++ +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE 128
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 129 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 229
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 104/201 (51%), Gaps = 16/201 (7%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFC 367
+G G FG VYKG + VAVK L ++Q F+ EV + H N+L G+
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 76
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHG-RPALDWARRKRIALGTARGLLYLHEQCDPKI 426
ST+ + +V + S L H+H + + IA TARG+ YLH + I
Sbjct: 77 STKPQLAIVTQWCEGSS----LYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEYLSTGQS-- 483
IHRD+K+ NI L ED +GDFGLA + SH + G++ +APE + S
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 484 -SEKTDVFGFGILLLELITGQ 503
S ++DV+ FGI+L EL+TGQ
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQ 210
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 70
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R ++ +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE 128
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 129 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 229
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 75
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R ++ +A + + YL
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE 133
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 134 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 234
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 139/293 (47%), Gaps = 25/293 (8%)
Query: 286 GHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQ 344
GH+ + + ++ + K+ LG G +G VY+G + +L VAVK LK+ + E
Sbjct: 1 GHMSP-NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-- 57
Query: 345 FQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARR 404
F E + H NL++L G C+ E ++ +M G++ LR+ R ++
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVL 115
Query: 405 KRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTT 464
+A + + YL ++ IHRD+ A N L+ E+ V DFGL++L+
Sbjct: 116 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 172
Query: 465 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
+ + APE L+ + S K+DV+ FG+LL E+ T +G + G+ L
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL----- 220
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
++ ++++KD + E++ ++ C Q+NP RP +E+ + E
Sbjct: 221 ----SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 72
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R ++ +A + + YL
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE 130
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 131 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 187
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 231
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 232 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 83
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R ++ +A + + YL
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLE 141
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 142 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 198
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 199 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 242
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 243 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 280
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 130/278 (46%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G FG VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 68
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R + +A + + YL
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE 126
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 127 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T + G +Q + ++++KD
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ----------------VYELLEKDY 227
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 228 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 70
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE 128
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 129 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 229
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 75
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R + +A + + YL
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE 133
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 134 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 234
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 70
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE 128
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 129 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 229
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 70
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE 128
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 129 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 229
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 70
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R + +A + + YL
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE 128
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 129 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T +G + G+ L ++ ++++KD
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIAT------YGMSPYP-GIDL---------SQVYELLEKDY 229
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 68
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R + +A + + YL
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE 126
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 127 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T + G +Q + ++++KD
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ----------------VYELLEKDY 227
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 228 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 41/327 (12%)
Query: 255 IVVGLLVWLRY---RHNQQIFFDVNDQYDPEVSLGHLKRYTFKELRAATSNFSAKNILGR 311
+ GL+ L Y + N+ + V+ YD + ++ + K+ LG
Sbjct: 185 VADGLITTLHYPAPKRNKPTIYGVSPNYD--------------KWEMERTDITMKHKLGG 230
Query: 312 GGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE 370
G +G VY+G + +L VAVK LK+ + E F E + H NL++L G C+ E
Sbjct: 231 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTRE 288
Query: 371 NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRD 430
++ +M G++ LR+ R + +A + + YL ++ IHR+
Sbjct: 289 PPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRN 343
Query: 431 VKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 490
+ A N L+ E+ V DFGL++L+ + + APE L+ + S K+DV+
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 403
Query: 491 GFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEE 550
FG+LL E+ T +G + G+ L ++ ++++KD + E+
Sbjct: 404 AFGVLLWEIAT------YGMSP-YPGIDLS---------QVYELLEKDYRMERPEGCPEK 447
Query: 551 MVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ ++ C Q+NP RP +E+ + E
Sbjct: 448 VYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 149/327 (45%), Gaps = 41/327 (12%)
Query: 255 IVVGLLVWLRY---RHNQQIFFDVNDQYDPEVSLGHLKRYTFKELRAATSNFSAKNILGR 311
+ GL+ L Y + N+ + V+ YD + ++ + K+ LG
Sbjct: 224 VADGLITTLHYPAPKRNKPTVYGVSPNYD--------------KWEMERTDITMKHKLGG 269
Query: 312 GGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE 370
G +G VY+G + +L VAVK LK+ + E F E + H NL++L G C+ E
Sbjct: 270 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTRE 327
Query: 371 NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRD 430
++ +M G++ LR+ R ++ +A + + YL ++ IHR+
Sbjct: 328 PPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRN 382
Query: 431 VKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 490
+ A N L+ E+ V DFGL++L+ + + APE L+ + S K+DV+
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 442
Query: 491 GFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEE 550
FG+LL E+ T +G + G+ L ++ ++++KD + E+
Sbjct: 443 AFGVLLWEIAT------YGMSPYP-GIDLS---------QVYELLEKDYRMERPEGCPEK 486
Query: 551 MVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ ++ C Q+NP RP +E+ + E
Sbjct: 487 VYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 149/327 (45%), Gaps = 41/327 (12%)
Query: 255 IVVGLLVWLRY---RHNQQIFFDVNDQYDPEVSLGHLKRYTFKELRAATSNFSAKNILGR 311
+ GL+ L Y + N+ + V+ YD + ++ + K+ LG
Sbjct: 182 VADGLITTLHYPAPKRNKPTVYGVSPNYD--------------KWEMERTDITMKHKLGG 227
Query: 312 GGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE 370
G +G VY+G + +L VAVK LK+ + E F E + H NL++L G C+ E
Sbjct: 228 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVCTRE 285
Query: 371 NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRD 430
++ +M G++ LR+ R ++ +A + + YL ++ IHR+
Sbjct: 286 PPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRN 340
Query: 431 VKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 490
+ A N L+ E+ V DFGL++L+ + + APE L+ + S K+DV+
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 400
Query: 491 GFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEE 550
FG+LL E+ T +G + G+ L ++ ++++KD + E+
Sbjct: 401 AFGVLLWEIAT------YGMSP-YPGIDLS---------QVYELLEKDYRMERPEGCPEK 444
Query: 551 MVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ ++ C Q+NP RP +E+ + E
Sbjct: 445 VYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFC 367
+G G FG VYKG + VAVK L ++Q F+ EV + H N+L G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 88
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHG-RPALDWARRKRIALGTARGLLYLHEQCDPKI 426
ST+ + +V + S L H+H + + IA TARG+ YLH + I
Sbjct: 89 STKPQLAIVTQWCEGSS----LYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEYLSTGQS-- 483
IHRD+K+ NI L ED +GDFGLA SH + G++ +APE + S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 484 -SEKTDVFGFGILLLELITGQ 503
S ++DV+ FGI+L EL+TGQ
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ 222
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFC 367
+G G FG VYKG + VAVK L ++Q F+ EV + H N+L G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 88
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHG-RPALDWARRKRIALGTARGLLYLHEQCDPKI 426
ST + +V + S L H+H + + IA TARG+ YLH + I
Sbjct: 89 STAPQLAIVTQWCEGSS----LYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEYLSTGQS-- 483
IHRD+K+ NI L ED +GDFGLA SH + G++ +APE + S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 484 -SEKTDVFGFGILLLELITGQ 503
S ++DV+ FGI+L EL+TGQ
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ 222
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 24/278 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY+G + +L VAVK LK+ + E F E + H N
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 68
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E ++ +M G++ LR+ R + +A + + YL
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLE 126
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ IHRD+ A N L+ E+ V DFGL++L+ + + APE L+
Sbjct: 127 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLA 183
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ S K+DV+ FG+LL E+ T + G +Q + ++++KD
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ----------------VYELLEKDY 227
Query: 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ E++ ++ C Q+NP RP +E+ + E
Sbjct: 228 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ G ++ VAVK LK +++ F E + H+ L+RL
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVV- 79
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
T+ ++ YM NGS+ L+ + ++ + +A A G+ ++ E+ IH
Sbjct: 80 TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIH 134
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+D
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIE- 547
V+ FGILL E++T R + G + V ++L+ + +
Sbjct: 195 VWSFGILLTEIVTHGR--------------------IPYPGMTNPEVIQNLERGYRMVRP 234
Query: 548 ---LEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
EE+ Q+ LC + P RP + +LE
Sbjct: 235 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ G ++ VAVK LK +++ F E + H+ L+RL
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVV- 83
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
T+ ++ YM NGS+ L+ + ++ + +A A G+ ++ E+ IH
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIH 138
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+D
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIE- 547
V+ FGILL E++T R + G + V ++L+ + +
Sbjct: 199 VWSFGILLTEIVTHGR--------------------IPYPGMTNPEVIQNLERGYRMVRP 238
Query: 548 ---LEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
EE+ Q+ LC + P RP + +LE
Sbjct: 239 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ G ++ VAVK LK +++ F E + H+ L+RL
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVV- 85
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
T+ ++ YM NGS+ L+ + ++ + +A A G+ ++ E+ IH
Sbjct: 86 TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIH 140
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+D
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 200
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIE- 547
V+ FGILL E++T R + G + V ++L+ + +
Sbjct: 201 VWSFGILLTEIVTHGR--------------------IPYPGMTNPEVIQNLERGYRMVRP 240
Query: 548 ---LEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
EE+ Q+ LC + P RP + +LE
Sbjct: 241 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ G ++ VAVK LK +++ F E + H+ L+RL
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVV- 77
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
T+ ++ YM NGS+ L+ + ++ + +A A G+ ++ E+ IH
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIH 132
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIE- 547
V+ FGILL E++T R + G + V ++L+ + +
Sbjct: 193 VWSFGILLTEIVTHGR--------------------IPYPGMTNPEVIQNLERGYRMVRP 232
Query: 548 ---LEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
EE+ Q+ LC + P RP + +LE
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ G ++ VAVK LK +++ F E + H+ L+RL
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVV- 86
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
T+ ++ YM NGS+ L+ + ++ + +A A G+ ++ E+ IH
Sbjct: 87 TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIH 141
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+D
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIE- 547
V+ FGILL E++T R + G + V ++L+ + +
Sbjct: 202 VWSFGILLTEIVTHGR--------------------IPYPGMTNPEVIQNLERGYRMVRP 241
Query: 548 ---LEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
EE+ Q+ LC + P RP + +LE
Sbjct: 242 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ G ++ VAVK LK +++ F E + H+ L+RL
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVV- 78
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
T+ ++ YM NGS+ L+ + ++ + +A A G+ ++ E+ IH
Sbjct: 79 TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIH 133
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+D
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 193
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIE- 547
V+ FGILL E++T R + G + V ++L+ + +
Sbjct: 194 VWSFGILLTEIVTHGR--------------------IPYPGMTNPEVIQNLERGYRMVRP 233
Query: 548 ---LEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
EE+ Q+ LC + P RP + +LE
Sbjct: 234 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ G ++ VAVK LK +++ F E + H+ L+RL
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVV- 77
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
T+ ++ YM NGS+ L+ + ++ + +A A G+ ++ E+ IH
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIH 132
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIE- 547
V+ FGILL E++T R + G + V ++L+ + +
Sbjct: 193 VWSFGILLTEIVTHGR--------------------IPYPGMTNPEVIQNLERGYRMVRP 232
Query: 548 ---LEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
EE+ Q+ LC + P RP + +LE
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 9/194 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFC 367
LG G FG V+ G +++ VAVK LK ++ VQ F E + H L+RL
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
+ E ++ YM GS+ L+ G+ L + + A G+ Y+ + I
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NYI 132
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HRD++AAN+L+ E + DFGLA++++ + + + APE ++ G + K+
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 488 DVFGFGILLLELIT 501
DV+ FGILL E++T
Sbjct: 193 DVWSFGILLYEIVT 206
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ G ++ VAVK LK +++ F E + H+ L+RL
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVV- 77
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
T+ ++ YM NGS+ L+ + ++ + +A A G+ ++ E+ IH
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIH 132
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIE- 547
V+ FGILL E++T R + G + V ++L+ + +
Sbjct: 193 VWSFGILLTEIVTHGR--------------------IPYPGMTNPEVIQNLERGYRMVRP 232
Query: 548 ---LEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
EE+ Q+ LC + P RP + +LE
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ G ++ VAVK LK +++ F E + H+ L+RL
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVV- 83
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
T+ ++ YM NGS+ L+ + ++ + +A A G+ ++ E+ IH
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIH 138
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+D
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIE- 547
V+ FGILL E++T R + G + V ++L+ + +
Sbjct: 199 VWSFGILLTEIVTHGR--------------------IPYPGMTNPEVIQNLERGYRMVRP 238
Query: 548 ---LEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
EE+ Q+ LC + P RP + +LE
Sbjct: 239 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ G ++ VAVK LK +++ F E + H+ L+RL
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVV- 87
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
T+ ++ YM NGS+ L+ + ++ + +A A G+ ++ E+ IH
Sbjct: 88 TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIH 142
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+D
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 202
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIE- 547
V+ FGILL E++T R + G + V ++L+ + +
Sbjct: 203 VWSFGILLTEIVTHGR--------------------IPYPGMTNPEVIQNLERGYRMVRP 242
Query: 548 ---LEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
EE+ Q+ LC + P RP + +LE
Sbjct: 243 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ G ++ VAVK LK +++ F E + H+ L+RL
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVV- 82
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
T+ ++ YM NGS+ L+ + ++ + +A A G+ ++ E+ IH
Sbjct: 83 TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIH 137
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+D
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIE- 547
V+ FGILL E++T R + G + V ++L+ + +
Sbjct: 198 VWSFGILLTEIVTHGR--------------------IPYPGMTNPEVIQNLERGYRMVRP 237
Query: 548 ---LEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
EE+ Q+ LC + P RP + +LE
Sbjct: 238 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 117/234 (50%), Gaps = 30/234 (12%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLK---DYNIAGGEVQFQTEVETISLAVH 357
+ + + I+G GGFG VY+ F G VAVK + D +I+ + E + ++ H
Sbjct: 7 AELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH 65
Query: 358 RNLLRLCGFCSTENERLLVYPYMPNGSVASRLR-DHIHGRPALDWARRKRIALGTARGLL 416
N++ L G C E LV + G + L I ++WA + ARG+
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWA------VQIARGMN 119
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFE--------AVVGDFGLAKLLDHRDSHVTTAVRG 468
YLH++ IIHRD+K++NIL+ + E + DFGLA+ HR + ++ A G
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW-HRTTKMSAA--G 176
Query: 469 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ---RALD-----FGRAANQ 514
+APE + S+ +DV+ +G+LL EL+TG+ R +D +G A N+
Sbjct: 177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK 230
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFC 367
+G G FG VYKG + VAVK L ++Q F+ EV + H N+L G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 77
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHG-RPALDWARRKRIALGTARGLLYLHEQCDPKI 426
ST+ + +V + S L H+H + + IA TA+G+ YLH + I
Sbjct: 78 STKPQLAIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEYLSTGQS-- 483
IHRD+K+ NI L ED +GDFGLA + SH + G++ +APE +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 484 -SEKTDVFGFGILLLELITGQ 503
S ++DV+ FGI+L EL+TGQ
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFC 367
+G G FG VYKG + VAVK L ++Q F+ EV + H N+L G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 72
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHG-RPALDWARRKRIALGTARGLLYLHEQCDPKI 426
ST+ + +V + S L H+H + + IA TA+G+ YLH + I
Sbjct: 73 STKPQLAIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEYLSTGQS-- 483
IHRD+K+ NI L ED +GDFGLA + SH + G++ +APE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 484 -SEKTDVFGFGILLLELITGQ 503
S ++DV+ FGI+L EL+TGQ
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFC 367
+G G FG VYKG + VAVK L ++Q F+ EV + H N+L G+
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 74
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHG-RPALDWARRKRIALGTARGLLYLHEQCDPKI 426
ST+ + +V + S L H+H + + IA TA+G+ YLH + I
Sbjct: 75 STKPQLAIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEYLSTGQS-- 483
IHRD+K+ NI L ED +GDFGLA + SH + G++ +APE +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 484 -SEKTDVFGFGILLLELITGQ 503
S ++DV+ FGI+L EL+TGQ
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQ 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFC 367
+G G FG VYKG + VAVK L ++Q F+ EV + H N+L G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 77
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHG-RPALDWARRKRIALGTARGLLYLHEQCDPKI 426
ST+ + +V + S L H+H + + IA TA+G+ YLH + I
Sbjct: 78 STKPQLAIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEYLSTGQS-- 483
IHRD+K+ NI L ED +GDFGLA + SH + G++ +APE +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 484 -SEKTDVFGFGILLLELITGQ 503
S ++DV+ FGI+L EL+TGQ
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ G ++ VAVK LK +++ F E + H+ L+RL
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVV- 72
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
T+ ++ YM NGS+ L+ + ++ + +A A G+ ++ E+ IH
Sbjct: 73 TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIH 127
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+D
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIE- 547
V+ FGILL E++T R + G + V ++L+ + +
Sbjct: 188 VWSFGILLTEIVTHGR--------------------IPYPGMTNPEVIQNLERGYRMVRP 227
Query: 548 ---LEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
EE+ Q+ LC + P RP + +LE
Sbjct: 228 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 131/291 (45%), Gaps = 50/291 (17%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++ + K+ LG G +G VY G + +L VAVK LK+ + E F E + H N
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPN 89
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
L++L G C+ E +V YMP G++ LR+ R+ + TA LLY+
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRE----------CNREEV---TAVVLLYMA 136
Query: 420 EQCDPKI--------IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVG 471
Q + IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 137 TQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIK 196
Query: 472 HIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKL 531
APE L+ S K+DV+ FG+LL E+ T +G + G+ L
Sbjct: 197 WTAPESLAYNTFSIKSDVWAFGVLLWEIAT------YGMSPYP-GI------------DL 237
Query: 532 SQMVDKDLKGNFDRIELEE-----MVQVALLCTQFNPLHRPKMSEVLKMLE 577
SQ+ D KG R+E E + ++ C +++P RP +E + E
Sbjct: 238 SQVYDLLEKGY--RMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFE 286
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFC 367
+G G FG VYKG + VAVK L ++Q F+ EV + H N+L G+
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 99
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHG-RPALDWARRKRIALGTARGLLYLHEQCDPKI 426
ST+ + +V + S L H+H + + IA TA+G+ YLH + I
Sbjct: 100 STKPQLAIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEYLSTGQS-- 483
IHRD+K+ NI L ED +GDFGLA + SH + G++ +APE +
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 484 -SEKTDVFGFGILLLELITGQ 503
S ++DV+ FGI+L EL+TGQ
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFC 367
+G G FG VYKG + VAVK L ++Q F+ EV + H N+L G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 100
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHG-RPALDWARRKRIALGTARGLLYLHEQCDPKI 426
ST+ + +V + S L H+H + + IA TA+G+ YLH + I
Sbjct: 101 STKPQLAIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEYLSTGQS-- 483
IHRD+K+ NI L ED +GDFGLA + SH + G++ +APE +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 484 -SEKTDVFGFGILLLELITGQ 503
S ++DV+ FGI+L EL+TGQ
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ 234
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFC 367
+G G FG VYKG + VAVK L ++Q F+ EV + H N+L G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 72
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHG-RPALDWARRKRIALGTARGLLYLHEQCDPKI 426
ST + +V + S L H+H + + IA TA+G+ YLH + I
Sbjct: 73 STAPQLAIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEYLSTGQS-- 483
IHRD+K+ NI L ED +GDFGLA + SH + G++ +APE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 484 -SEKTDVFGFGILLLELITGQ 503
S ++DV+ FGI+L EL+TGQ
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 130/293 (44%), Gaps = 50/293 (17%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG+VY+G D VAVK + + ++F E + +++R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLR------DHIHGRPALDWARRKRIALGTARGLL 416
L G S L+V M +G + S LR ++ GRP ++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRG------TV 470
YL+ + K +HRD+ A N ++ DF +GDFG+ RD + T R V
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMT-----RDIYETAYYRKGGKGLLPV 196
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ--RGVMLDWVKKLHQE 528
+APE L G + +D++ FG++L E+ + A Q +G+ + V K +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------LAEQPYQGLSNEQVLKFVMD 247
Query: 529 GKLSQMVDKDLKGNFDRIE--LEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579
G G D+ + E + + +C QFNP RP E++ +L+ D
Sbjct: 248 G-----------GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 32/272 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
+G G FG+V+ G + + VA+K +K+ +++ E F E E + H L++L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS--EDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
+ LV+ +M +G ++ LR R + L G+ YL E C +IH
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD+ A N L+ E+ V DFG+ + + +T + V +PE S + S K+D
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFD---- 544
V+ FG+L+ E+ + K+ E + + V +D+ F
Sbjct: 207 VWSFGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKP 246
Query: 545 RIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
R+ + Q+ C + P RP S +L+ L
Sbjct: 247 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFC 367
+G G FG VYKG + VAVK L ++Q F+ EV + H N+L G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 72
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHG-RPALDWARRKRIALGTARGLLYLHEQCDPKI 426
ST+ + +V + S L H+H + + IA TA+G+ YLH + I
Sbjct: 73 STKPQLAIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEYLSTGQS-- 483
IHRD+K+ NI L ED +GDFGLA SH + G++ +APE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 484 -SEKTDVFGFGILLLELITGQ 503
S ++DV+ FGI+L EL+TGQ
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG+VY+G D VAVK + + ++F E + +++R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLR------DHIHGRPALDWARRKRIALGTARGLL 416
L G S L+V M +G + S LR ++ GRP ++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRG------TV 470
YL+ + K +HRD+ A N ++ DF +GDFG+ RD + T R V
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMT-----RDIYETDYYRKGGKGLLPV 196
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530
+APE L G + +D++ FG++L E IT + +N++ V K +G
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ------VLKFVMDG- 248
Query: 531 LSQMVDKDLKGNFDRIE--LEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579
G D+ + E + + +C QFNP RP E++ +L+ D
Sbjct: 249 ----------GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ G ++ VAVK LK +++ F E + H+ L+RL
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVV- 73
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
T+ ++ YM NGS+ L+ + ++ + +A A G+ ++ E+ IH
Sbjct: 74 TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIH 128
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
R+++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+D
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIE- 547
V+ FGILL E++T R + G + V ++L+ + +
Sbjct: 189 VWSFGILLTEIVTHGR--------------------IPYPGMTNPEVIQNLERGYRMVRP 228
Query: 548 ---LEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
EE+ Q+ LC + P RP + +LE
Sbjct: 229 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 101/195 (51%), Gaps = 12/195 (6%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG+V G + VAVK +K+ +++ E +F E +T+ H L++ G CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS--EDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E +V Y+ NG + + LR H G L+ ++ + G+ +L + IH
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKG---LEPSQLLEMCYDVCEGMAFLESH---QFIH 127
Query: 429 RDVKAANILLDEDFEAVVGDFGLAK-LLDHRDSHVTT-AVRGTVGHIAPEYLSTGQSSEK 486
RD+ A N L+D D V DFG+ + +LD D +V++ + V APE + S K
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLD--DQYVSSVGTKFPVKWSAPEVFHYFKYSSK 185
Query: 487 TDVFGFGILLLELIT 501
+DV+ FGIL+ E+ +
Sbjct: 186 SDVWAFGILMWEVFS 200
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFC 367
+G G FG VYKG + VAVK L ++Q F+ EV + H N+L G+
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 92
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHG-RPALDWARRKRIALGTARGLLYLHEQCDPKI 426
ST+ + +V + S L H+H + + IA TA+G+ YLH + I
Sbjct: 93 STKPQLAIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEYLSTGQS-- 483
IHRD+K+ NI L ED +GDFGLA SH + G++ +APE +
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 484 -SEKTDVFGFGILLLELITGQ 503
S ++DV+ FGI+L EL+TGQ
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQ 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFC 367
+G G FG VYKG + VAVK L ++Q F+ EV + H N+L G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 100
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHG-RPALDWARRKRIALGTARGLLYLHEQCDPKI 426
ST+ + +V + S L H+H + + IA TA+G+ YLH + I
Sbjct: 101 STKPQLAIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEYLSTGQS-- 483
IHRD+K+ NI L ED +GDFGLA SH + G++ +APE +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 484 -SEKTDVFGFGILLLELITGQ 503
S ++DV+ FGI+L EL+TGQ
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ 234
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 9/194 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFC 367
LG G FG V+ G +++ VAVK LK ++ VQ F E + H L+RL
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
+ E ++ +M GS+ L+ G+ L + + A G+ Y+ + I
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NYI 131
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HRD++AAN+L+ E + DFGLA++++ + + + APE ++ G + K+
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 488 DVFGFGILLLELIT 501
+V+ FGILL E++T
Sbjct: 192 NVWSFGILLYEIVT 205
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 130/289 (44%), Gaps = 42/289 (14%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG+VY+G D VAVK + + ++F E + +++R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLR------DHIHGRPALDWARRKRIALGTARGLL 416
L G S L+V M +G + S LR ++ GRP ++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRG--TVGHIA 474
YL+ + K +HRD+ A N ++ DF +GDFG+ + + D +G V +A
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-XRKGGKGLLPVRWMA 200
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ--RGVMLDWVKKLHQEGKLS 532
PE L G + +D++ FG++L E+ + A Q +G+ + V K +G
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------LAEQPYQGLSNEQVLKFVMDG--- 248
Query: 533 QMVDKDLKGNFDRIE--LEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579
G D+ + E + + +C QFNP RP E++ +L+ D
Sbjct: 249 --------GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 130/293 (44%), Gaps = 50/293 (17%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG+VY+G D VAVK + + ++F E + +++R
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLR------DHIHGRPALDWARRKRIALGTARGLL 416
L G S L+V M +G + S LR ++ GRP ++A A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRG------TV 470
YL+ + K +HRD+ A N ++ DF +GDFG+ RD + T R V
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMT-----RDIYETDYYRKGGKGLLPV 195
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ--RGVMLDWVKKLHQE 528
+APE L G + +D++ FG++L E+ + A Q +G+ + V K +
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------LAEQPYQGLSNEQVLKFVMD 246
Query: 529 GKLSQMVDKDLKGNFDRIE--LEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579
G G D+ + E + + +C QFNP RP E++ +L+ D
Sbjct: 247 G-----------GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 288
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 130/289 (44%), Gaps = 42/289 (14%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG+VY+G D VAVK + + ++F E + +++R
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLR------DHIHGRPALDWARRKRIALGTARGLL 416
L G S L+V M +G + S LR ++ GRP ++A A G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRG--TVGHIA 474
YL+ + K +HRD+ A N ++ DF +GDFG+ + + D +G V +A
Sbjct: 142 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-XRKGGKGLLPVRWMA 197
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ--RGVMLDWVKKLHQEGKLS 532
PE L G + +D++ FG++L E+ + A Q +G+ + V K +G
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITS---------LAEQPYQGLSNEQVLKFVMDG--- 245
Query: 533 QMVDKDLKGNFDRIE--LEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579
G D+ + E + + +C QFNP RP E++ +L+ D
Sbjct: 246 --------GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 286
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 134/307 (43%), Gaps = 42/307 (13%)
Query: 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQ 344
Y E + + LG+G FG+VY+G D VAVK + + ++
Sbjct: 7 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 345 FQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLR------DHIHGRPA 398
F E + +++RL G S L+V M +G + S LR ++ GRP
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
++A A G+ YL+ + K +HRD+ A N ++ DF +GDFG+ + +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
Query: 459 DSHVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ-- 514
D +G V +APE L G + +D++ FG++L E+ + A Q
Sbjct: 184 DX-XRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------LAEQPY 233
Query: 515 RGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIE--LEEMVQVALLCTQFNPLHRPKMSEV 572
+G+ + V K +G G D+ + E + + +C QFNP RP E+
Sbjct: 234 QGLSNEQVLKFVMDG-----------GYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEI 282
Query: 573 LKMLEGD 579
+ +L+ D
Sbjct: 283 VNLLKDD 289
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 32/272 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
+G G FG+V+ G + + VA+K +++ A E F E E + H L++L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREG--AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
+ LV+ +M +G ++ LR R + L G+ YL E C +IH
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD+ A N L+ E+ V DFG+ + + +T + V +PE S + S K+D
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFD---- 544
V+ FG+L+ E+ + K+ E + + V +D+ F
Sbjct: 190 VWSFGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKP 229
Query: 545 RIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
R+ + Q+ C + P RP S +L+ L
Sbjct: 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 32/273 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G G V+ G ++ VAVK LK +++ F E + H+ L+RL
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYAVV- 77
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
T+ ++ YM NGS+ L+ + ++ + +A A G+ ++ E+ IH
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIH 132
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + + DFGLA+L++ + + + APE ++ G + K+D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIE- 547
V+ FGILL E++T R + G + V ++L+ + +
Sbjct: 193 VWSFGILLTEIVTHGR--------------------IPYPGMTNPEVIQNLERGYRMVRP 232
Query: 548 ---LEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
EE+ Q+ LC + P RP + +LE
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 32/272 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
+G G FG+V+ G + + VA+K +++ A E F E E + H L++L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREG--AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
+ LV+ +M +G ++ LR R + L G+ YL E C +IH
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD+ A N L+ E+ V DFG+ + + +T + V +PE S + S K+D
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFD---- 544
V+ FG+L+ E+ + K+ E + + V +D+ F
Sbjct: 185 VWSFGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKP 224
Query: 545 RIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
R+ + Q+ C + P RP S +L+ L
Sbjct: 225 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 31/285 (10%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGA-----LVAVKRLKDYNIAGGEVQFQTEVETISLA 355
S + + ++G G FG VYKG + VA+K LK V F E +
Sbjct: 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
H N++RL G S +++ YM NG++ LR+ L R G A G+
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGM 160
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHI 473
YL + +HRD+ A NIL++ + V DFGL+++L D ++ T+ + +
Sbjct: 161 KYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT 217
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLS 532
APE +S + + +DV+ FGI++ E++T G+R + +N + +K ++ +L
Sbjct: 218 APEAISYRKFTSASDVWSFGIVMWEVMTYGERP--YWELSNH-----EVMKAINDGFRLP 270
Query: 533 QMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+D + Q+ + C Q RPK ++++ +L+
Sbjct: 271 TPMDCP----------SAIYQLMMQCWQQERARRPKFADIVSILD 305
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 32/272 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
+G G FG+V+ G + + VA+K +++ A E F E E + H L++L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREG--AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
+ LV+ +M +G ++ LR R + L G+ YL E C +IH
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD+ A N L+ E+ V DFG+ + + +T + V +PE S + S K+D
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFD---- 544
V+ FG+L+ E+ + K+ E + + V +D+ F
Sbjct: 187 VWSFGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKP 226
Query: 545 RIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
R+ + Q+ C + P RP S +L+ L
Sbjct: 227 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 137/302 (45%), Gaps = 51/302 (16%)
Query: 306 KNILGRGGFGIVYKG-CFS-----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
K LG G FG V+ C++ D LVAVK LKD +A + FQ E E ++ H +
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK-DFQREAELLTNLQHEH 78
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDH-------IHGRP-----ALDWARRKRI 407
+++ G C + ++V+ YM +G + LR H + G+P L ++ I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVR 467
A A G++YL Q +HRD+ N L+ + +GDFG++ RD + T R
Sbjct: 139 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMS-----RDVYSTDYYR 190
Query: 468 GTVGH-------IAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD 520
GH + PE + + + ++DV+ FG++L E+ T +G+
Sbjct: 191 -VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT------YGKQP-------- 235
Query: 521 WVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDG 580
W + + E + + + + R+ +E+ V L C Q P R + E+ K+L G
Sbjct: 236 WFQLSNTE--VIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALG 293
Query: 581 LA 582
A
Sbjct: 294 KA 295
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 142/315 (45%), Gaps = 36/315 (11%)
Query: 270 QIFFDVNDQYDPEVSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFS----DG 325
+ F D + DP ++ KEL A +N S ++G G FG V G
Sbjct: 20 RTFVDPHTFEDPTQTVHEFA----KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 326 ALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSV 385
VA+K LK F E + H N++RL G + ++V YM NGS+
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 386 ASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV 445
S LR H + R G A G+ YL D +HRD+ A NIL++ +
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCK 187
Query: 446 VGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-G 502
V DFGLA++L D ++ T + + +PE ++ + + +DV+ +GI+L E+++ G
Sbjct: 188 VSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 503 QRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFN 562
+R + +NQ D +K + + +L +D + Q+ L C Q +
Sbjct: 248 ERP--YWEMSNQ-----DVIKAVDEGYRLPPPMDCP----------AALYQLMLDCWQKD 290
Query: 563 PLHRPKMSEVLKMLE 577
+RPK +++ +L+
Sbjct: 291 RNNRPKFEQIVSILD 305
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG+VY+G D VAVK + + ++F E + +++R
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLR------DHIHGRPALDWARRKRIALGTARGLL 416
L G S L+V M +G + S LR ++ GRP ++A A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRG------TV 470
YL+ + K +HR++ A N ++ DF +GDFG+ RD + T R V
Sbjct: 145 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMT-----RDIYETDYYRKGGKGLLPV 196
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530
+APE L G + +D++ FG++L E IT + +N++ V K +G
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ------VLKFVMDG- 248
Query: 531 LSQMVDKDLKGNFDRIE--LEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579
G D+ + E + + +C QFNP RP E++ +L+ D
Sbjct: 249 ----------GYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 142/315 (45%), Gaps = 36/315 (11%)
Query: 270 QIFFDVNDQYDPEVSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFS----DG 325
+ F D + DP ++ KEL A +N S ++G G FG V G
Sbjct: 20 RTFVDPHTYEDPTQTVHEFA----KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 326 ALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSV 385
VA+K LK F E + H N++RL G + ++V YM NGS+
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 386 ASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV 445
S LR H + R G A G+ YL D +HRD+ A NIL++ +
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCK 187
Query: 446 VGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-G 502
V DFGL+++L D ++ T + + +PE ++ + + +DV+ +GI+L E+++ G
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 503 QRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFN 562
+R + +NQ D +K + + +L +D + Q+ L C Q +
Sbjct: 248 ERP--YWEMSNQ-----DVIKAVDEGYRLPPPMDCP----------AALYQLMLDCWQKD 290
Query: 563 PLHRPKMSEVLKMLE 577
+RPK +++ +L+
Sbjct: 291 RNNRPKFEQIVSILD 305
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 149/347 (42%), Gaps = 62/347 (17%)
Query: 255 IVVGLLVWLRYRHNQQI-----FFDVNDQYDPEVSLGHLKRYTFKELRAATSNFSAKNIL 309
+V+ L V+ R R+N ++ + VN +Y + Y E A + L
Sbjct: 1 LVIMLYVFHRKRNNSRLGNGVLYASVNPEYFSAADV-----YVPDEWEVAREKITMSREL 55
Query: 310 GRGGFGIVYKGCFSDGAL-------VAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
G+G FG+VY+G + G + VA+K + + ++F E + +++R
Sbjct: 56 GQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRD---HIHGRPAL---DWARRKRIALGTARGLL 416
L G S L++ M G + S LR + P L ++ ++A A G+
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRG------TV 470
YL+ K +HRD+ A N ++ EDF +GDFG+ RD + T R V
Sbjct: 175 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYETDYYRKGGKGLLPV 226
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ--RGVMLDWVKKLHQE 528
++PE L G + +DV+ FG++L E+ T A Q +G+ + V + E
Sbjct: 227 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQPYQGLSNEQVLRFVME 277
Query: 529 GKLSQMVDK--DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVL 573
G L D D+ + ++ +C Q+NP RP E++
Sbjct: 278 GGLLDKPDNCPDM-----------LFELMRMCWQYNPKMRPSFLEII 313
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 42/296 (14%)
Query: 286 GHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQF 345
G L +KE+ + ++GRG FG+V K + VA+K+++ F
Sbjct: 1 GSLHMIDYKEIEV-------EEVVGRGAFGVVCKAKWR-AKDVAIKQIES---ESERKAF 49
Query: 346 QTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDW---A 402
E+ +S H N+++L G C N LV Y GS L + +HG L + A
Sbjct: 50 IVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGS----LYNVLHGAEPLPYYTAA 103
Query: 403 RRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSH 461
L ++G+ YLH +IHRD+K N+LL + + DFG A + +H
Sbjct: 104 HAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---TH 160
Query: 462 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD-FGRAANQRGVMLD 520
+T +G+ +APE SEK DVF +GI+L E+IT ++ D G A + +
Sbjct: 161 MTNN-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR----IM 215
Query: 521 WVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
W L + + K ++ R C +P RP M E++K++
Sbjct: 216 WAVHNGTRPPLIKNLPKPIESLMTR------------CWSKDPSQRPSMEEIVKIM 259
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG+VY+G D VAVK + + ++F E + +++R
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLR------DHIHGRPALDWARRKRIALGTARGLL 416
L G S L+V M +G + S LR ++ GRP ++A A G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRG------TV 470
YL+ + K +HR++ A N ++ DF +GDFG+ RD + T R V
Sbjct: 146 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMT-----RDIYETDYYRKGGKGLLPV 197
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530
+APE L G + +D++ FG++L E IT + +N++ V K +G
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ------VLKFVMDG- 249
Query: 531 LSQMVDKDLKGNFDRIE--LEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579
G D+ + E + + +C QFNP RP E++ +L+ D
Sbjct: 250 ----------GYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 290
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMS--PESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E +V YM GS+ L+D GR AL +A A G+ Y+ IH
Sbjct: 75 -EEPIYIVTEYMNKGSLLDFLKDG-EGR-ALKLPNLVDMAAQVAAGMAYIERM---NYIH 128
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD+++ANIL+ + DFGLA+L++ + + + APE G+ + K+D
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 489 VFGFGILLLELITGQR 504
V+ FGILL EL+T R
Sbjct: 189 VWSFGILLTELVTKGR 204
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 142/315 (45%), Gaps = 36/315 (11%)
Query: 270 QIFFDVNDQYDPEVSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFS----DG 325
+ F D + DP ++ KEL A +N S ++G G FG V G
Sbjct: 20 RTFVDPHTFEDPTQTVHEFA----KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 326 ALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSV 385
VA+K LK F E + H N++RL G + ++V YM NGS+
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 386 ASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV 445
S LR H + R G A G+ YL D +HRD+ A NIL++ +
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGFVHRDLAARNILINSNLVCK 187
Query: 446 VGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-G 502
V DFGL+++L D ++ T + + +PE ++ + + +DV+ +GI+L E+++ G
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 503 QRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFN 562
+R + +NQ D +K + + +L +D + Q+ L C Q +
Sbjct: 248 ERP--YWEMSNQ-----DVIKAVDEGYRLPPPMDCP----------AALYQLMLDCWQKD 290
Query: 563 PLHRPKMSEVLKMLE 577
+RPK +++ +L+
Sbjct: 291 RNNRPKFEQIVSILD 305
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 107/217 (49%), Gaps = 18/217 (8%)
Query: 293 FKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVET 351
+ E+ A+ S + +G G FG VYKG + VAVK LK + + Q F+ EV
Sbjct: 30 YWEIEASEVMLSTR--IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAV 85
Query: 352 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPA-LDWARRKRIALG 410
+ H N+L G+ + +N ++ S L H+H + + IA
Sbjct: 86 LRKTRHVNILLFMGYMTKDNLAIVT-----QWCEGSSLYKHLHVQETKFQMFQLIDIARQ 140
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH-RDSHVTTAVRGT 469
TA+G+ YLH + IIHRD+K+ NI L E +GDFGLA + S G+
Sbjct: 141 TAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGS 197
Query: 470 VGHIAPEYLSTGQS---SEKTDVFGFGILLLELITGQ 503
V +APE + + S ++DV+ +GI+L EL+TG+
Sbjct: 198 VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 32/291 (10%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEV 349
KEL A +N S ++G G FG V G VA+K LK F E
Sbjct: 11 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 350 ETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ H N++RL G + ++V YM NGS+ S LR H + R
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR--- 125
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVR 467
G A G+ YL D +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 126 GIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLH 526
+ +PE ++ + + +DV+ +GI+L E+++ G+R + +NQ D +K +
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVD 235
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ +L +D + Q+ L C Q + +RPK +++ +L+
Sbjct: 236 EGYRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 32/291 (10%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEV 349
KEL A +N S ++G G FG V G VA+K LK F E
Sbjct: 28 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 85
Query: 350 ETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ H N++RL G + ++V YM NGS+ S LR H + R
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR--- 142
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVR 467
G A G+ YL D +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 143 GIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 199
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLH 526
+ +PE ++ + + +DV+ +GI+L E+++ G+R + +NQ D +K +
Sbjct: 200 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVD 252
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ +L +D + Q+ L C Q + +RPK +++ +L+
Sbjct: 253 EGYRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 293
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 118/272 (43%), Gaps = 32/272 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
+G G FG+V+ G + + VA+K +++ A E F E E + H L++L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREG--AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
+ LV +M +G ++ LR R + L G+ YL E C +IH
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD+ A N L+ E+ V DFG+ + + +T + V +PE S + S K+D
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFD---- 544
V+ FG+L+ E+ + K+ E + + V +D+ F
Sbjct: 188 VWSFGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKP 227
Query: 545 RIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
R+ + Q+ C + P RP S +L+ L
Sbjct: 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 32/291 (10%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEV 349
KEL A +N S ++G G FG V G VA+K LK F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 350 ETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ H N++RL G + ++V YM NGS+ S LR H + R
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR--- 154
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVR 467
G A G+ YL D +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLH 526
+ +PE ++ + + +DV+ +GI+L E+++ G+R + +NQ D +K +
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVD 264
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ +L +D + Q+ L C Q + +RPK +++ +L+
Sbjct: 265 EGYRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 32/291 (10%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEV 349
KEL A +N S ++G G FG V G VA+K LK F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 350 ETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ H N++RL G + ++V YM NGS+ S LR H + R
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR--- 154
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVR 467
G A G+ YL D +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLH 526
+ +PE ++ + + +DV+ +GI+L E+++ G+R + +NQ D +K +
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVD 264
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ +L +D + Q+ L C Q + +RPK +++ +L+
Sbjct: 265 EGYRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 142/315 (45%), Gaps = 36/315 (11%)
Query: 270 QIFFDVNDQYDPEVSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFS----DG 325
+ F D + DP ++ KEL A +N S ++G G FG V G
Sbjct: 20 RTFVDPHTFEDPTQTVHEFA----KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 326 ALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSV 385
VA+K LK F E + H N++RL G + ++V YM NGS+
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 386 ASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV 445
S LR H + R G A G+ YL D +HRD+ A NIL++ +
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCK 187
Query: 446 VGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-G 502
V DFGL+++L D ++ T + + +PE ++ + + +DV+ +GI+L E+++ G
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 503 QRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFN 562
+R + +NQ D +K + + +L +D + Q+ L C Q +
Sbjct: 248 ERP--YWEMSNQ-----DVIKAVDEGYRLPPPMDCP----------AALYQLMLDCWQKD 290
Query: 563 PLHRPKMSEVLKMLE 577
+RPK +++ +L+
Sbjct: 291 RNNRPKFEQIVSILD 305
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 125/276 (45%), Gaps = 35/276 (12%)
Query: 306 KNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCG 365
+ ++GRG FG+V K + VA+K+++ F E+ +S H N+++L G
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIES---ESERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 366 FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDW---ARRKRIALGTARGLLYLHEQC 422
C N LV Y GS L + +HG L + A L ++G+ YLH
Sbjct: 69 ACL--NPVCLVMEYAEGGS----LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 423 DPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG 481
+IHRD+K N+LL + + DFG A + +H+T +G+ +APE
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNN-KGSAAWMAPEVFEGS 178
Query: 482 QSSEKTDVFGFGILLLELITGQRALD-FGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLK 540
SEK DVF +GI+L E+IT ++ D G A + + W L + + K ++
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR----IMWAVHNGTRPPLIKNLPKPIE 234
Query: 541 GNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
R C +P RP M E++K++
Sbjct: 235 SLMTR------------CWSKDPSQRPSMEEIVKIM 258
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 32/291 (10%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEV 349
KEL A +N S ++G G FG V G VA+K LK F E
Sbjct: 38 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 95
Query: 350 ETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ H N++RL G + ++V YM NGS+ S LR H + R
Sbjct: 96 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR--- 152
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVR 467
G A G+ YL D +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 153 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 209
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLH 526
+ +PE ++ + + +DV+ +GI+L E+++ G+R + +NQ D +K +
Sbjct: 210 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVD 262
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ +L +D + Q+ L C Q + +RPK +++ +L+
Sbjct: 263 EGYRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 303
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 141/315 (44%), Gaps = 36/315 (11%)
Query: 270 QIFFDVNDQYDPEVSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFS----DG 325
+ F D + DP ++ KEL A +N S ++G G FG V G
Sbjct: 20 RTFVDPHTFEDPTQTVHEFA----KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 326 ALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSV 385
VA+K LK F E + H N++RL G + ++V YM NGS+
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 386 ASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV 445
S LR H + R G A G+ YL D +HRD+ A NIL++ +
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCK 187
Query: 446 VGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-G 502
V DFGL ++L D ++ T + + +PE ++ + + +DV+ +GI+L E+++ G
Sbjct: 188 VSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 503 QRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFN 562
+R + +NQ D +K + + +L +D + Q+ L C Q +
Sbjct: 248 ERP--YWEMSNQ-----DVIKAVDEGYRLPPPMDCP----------AALYQLMLDCWQKD 290
Query: 563 PLHRPKMSEVLKMLE 577
+RPK +++ +L+
Sbjct: 291 RNNRPKFEQIVSILD 305
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK N++ F E + + H L++L S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E +V YM GS+ L+ + G+ L + +A A G+ Y+ +H
Sbjct: 251 -EEPIYIVTEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERM---NYVH 304
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ E+ V DFGL +L++ + + + APE G+ + K+D
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 364
Query: 489 VFGFGILLLELITGQR 504
V+ FGILL EL T R
Sbjct: 365 VWSFGILLTELTTKGR 380
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E +V YM GS+ L+ + G+ L + +A A G+ Y+ +H
Sbjct: 73 -EEPIYIVTEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERM---NYVH 126
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+D
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 489 VFGFGILLLELITGQR 504
V+ FGILL EL T R
Sbjct: 187 VWSFGILLTELTTKGR 202
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E +V YM GS+ L+ + G+ L + +A A G+ Y+ +H
Sbjct: 84 -EEPIYIVIEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 489 VFGFGILLLELITGQR 504
V+ FGILL EL T R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPA--LDWARRKRIALGTARGLLYLHEQCDPKI 426
E +V YM GS L D + G L + +A A G+ Y+
Sbjct: 74 -EEPIXIVTEYMSKGS----LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 125
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEK 486
+HRD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 487 TDVFGFGILLLELITGQR 504
+DV+ FGILL EL T R
Sbjct: 186 SDVWSFGILLTELTTKGR 203
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E +V YM GS+ L+ + G+ L + +A A G+ Y+ +H
Sbjct: 75 -EEPIYIVTEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERM---NYVH 128
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+D
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 489 VFGFGILLLELITGQR 504
V+ FGILL EL T R
Sbjct: 189 VWSFGILLTELTTKGR 204
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E +V YM GS+ L+ + G+ L + +A A G+ Y+ +H
Sbjct: 84 -EEPIYIVIEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 489 VFGFGILLLELITGQR 504
V+ FGILL EL T R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E +V YM GS+ L+ + G+ L + +A A G+ Y+ +H
Sbjct: 84 -EEPIYIVTEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 489 VFGFGILLLELITGQR 504
V+ FGILL EL T R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E +V YM GS+ L+ + G+ L + +A A G+ Y+ +H
Sbjct: 84 -EEPIYIVTEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 489 VFGFGILLLELITGQR 504
V+ FGILL EL T R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPA--LDWARRKRIALGTARGLLYLHEQCDPKI 426
E +V YM GS L D + G L + +A A G+ Y+
Sbjct: 77 -EEPIYIVTEYMSKGS----LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 128
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEK 486
+HRD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 487 TDVFGFGILLLELITGQR 504
+DV+ FGILL EL T R
Sbjct: 189 SDVWSFGILLTELTTKGR 206
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 309 LGRGGFGIVYKGCFS-----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
LG G FG V C+ G +VAVK LK+ +Q E+E + H ++++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 364 CGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ 421
G C + E+ LV Y+P GS LRD++ R + A+ A G+ YLH Q
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGS----LRDYL-PRHCVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 422 CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYLS 479
IHR + A N+LLD D +GDFGLAK + H V V APE L
Sbjct: 131 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 187
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
+ +DV+ FG+ L EL+T
Sbjct: 188 ECKFYYASDVWSFGVTLYELLT 209
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E +V YM GS+ L+ + G+ L + +A A G+ Y+ +H
Sbjct: 84 -EEPIYIVCEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 489 VFGFGILLLELITGQR 504
V+ FGILL EL T R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 309 LGRGGFGIVYKGCFS-----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
LG G FG V C+ G +VAVK LK+ +Q E+E + H ++++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 364 CGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ 421
G C + E+ LV Y+P GS LRD++ R + A+ A G+ YLH Q
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGS----LRDYL-PRHCVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 422 CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYLS 479
IHR + A N+LLD D +GDFGLAK + H V V APE L
Sbjct: 132 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 188
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
+ +DV+ FG+ L EL+T
Sbjct: 189 ECKFYYASDVWSFGVTLYELLT 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 49 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ Y+P GS+ L+ H + +D + + +G+ YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGT 163
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHRD+ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 164 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 221 TESKFSVASDVWSFGVVLYELFT 243
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 118/272 (43%), Gaps = 32/272 (11%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
+G G FG+V+ G + + VA+K +++ A E F E E + H L++L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREG--AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
+ LV+ +M +G ++ LR R + L G+ YL E +IH
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEE---ASVIH 126
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD+ A N L+ E+ V DFG+ + + +T + V +PE S + S K+D
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFD---- 544
V+ FG+L+ E+ + K+ E + + V +D+ F
Sbjct: 187 VWSFGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKP 226
Query: 545 RIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
R+ + Q+ C + P RP S +L+ L
Sbjct: 227 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ Y+P GS+ L+ H + +D + + +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGT 132
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHRD+ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 16 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ Y+P GS+ L+ H + +D + + +G+ YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGT 130
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHRD+ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 131 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 188 TESKFSVASDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 17 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ Y+P GS+ L+ H + +D + + +G+ YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGT 131
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHRD+ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 132 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 189 TESKFSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 22 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ Y+P GS+ L+ H + +D + + +G+ YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGT 136
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHRD+ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 137 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 194 TESKFSVASDVWSFGVVLYELFT 216
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 93/208 (44%), Gaps = 13/208 (6%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVETISLA 355
A +F LG+G FG VY + + A+K L + AG E Q + EVE S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
H N+LRL G+ L+ Y P G+V L+ D R A L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAP 475
Y H + K+IHRD+K N+LL E + DFG + H S A+ GT+ ++ P
Sbjct: 122 SYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPP 175
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQ 503
E + EK D++ G+L E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ Y+P GS+ L+ H + +D + + +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGT 132
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHRD+ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPA--LDWARRKRIALGTARGLLYLHEQCDPKI 426
E +V YM GS L D + G L + +A A G+ Y+
Sbjct: 250 -EEPIYIVTEYMSKGS----LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 301
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEK 486
+HRD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 487 TDVFGFGILLLELITGQR 504
+DV+ FGILL EL T R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 25 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ Y+P GS+ L+ H + +D + + +G+ YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGT 139
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHRD+ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 140 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 197 TESKFSVASDVWSFGVVLYELFT 219
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPA--LDWARRKRIALGTARGLLYLHEQCDPKI 426
E +V YM GS L D + G L + +A A G+ Y+
Sbjct: 250 -EEPIYIVTEYMSKGS----LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 301
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEK 486
+HRD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 487 TDVFGFGILLLELITGQR 504
+DV+ FGILL EL T R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G V L+ D R
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK----LSKFDEQRTATYITE 121
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 175
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ Y+P GS+ L+ H + +D + + +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGT 135
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHRD+ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 23 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ Y+P GS+ L+ H + +D + + +G+ YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGT 137
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHRD+ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 138 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 195 TESKFSVASDVWSFGVVLYELFT 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 36 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ Y+P GS+ L+ H + +D + + +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGT 150
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHRD+ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 151 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 24 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ Y+P GS+ L+ H + +D + + +G+ YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGT 138
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHRD+ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 139 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 196 TESKFSVASDVWSFGVVLYELFT 218
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 36 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ Y+P GS+ L+ H + +D + + +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGT 150
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHRD+ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 151 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 117
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+
Sbjct: 118 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTL 171
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPA--LDWARRKRIALGTARGLLYLHEQCDPKI 426
E +V YM GS L D + G L + +A A G+ Y+
Sbjct: 333 -EEPIYIVTEYMSKGS----LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 384
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEK 486
+HRD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 487 TDVFGFGILLLELITGQR 504
+DV+ FGILL EL T R
Sbjct: 445 SDVWSFGILLTELTTKGR 462
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 142
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+
Sbjct: 143 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 196
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 8/196 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E +V YM GS+ L+ + G+ L + +A A G+ Y+ +H
Sbjct: 84 -EEPIYIVTEYMSKGSLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD+ AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+D
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 489 VFGFGILLLELITGQR 504
V+ FGILL EL T R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPA--LDWARRKRIALGTARGLLYLHEQCDPKI 426
E +V YM GS L D + G L + +A A G+ Y+
Sbjct: 250 -EEPIYIVGEYMSKGS----LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NY 301
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEK 486
+HRD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 487 TDVFGFGILLLELITGQR 504
+DV+ FGILL EL T R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 306 KNILGRGGFGIVYKGCFSDGAL---VAVKRLKDYNIAGGEVQFQTEVETI-SLAVHRNLL 361
++++G G FG V K L A+KR+K+Y F E+E + L H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDH--IHGRPALDWARRK----------RIAL 409
L G C L Y P+G++ LR + PA A A
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRG 468
ARG+ YL ++ + IHRD+ A NIL+ E++ A + DFGL++ ++ +V T R
Sbjct: 140 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 193
Query: 469 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQE 528
V +A E L+ + +DV+ +G+LL E+++ G + +KL Q
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS------LGGTPYCGMTCAELYEKLPQG 247
Query: 529 GKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVL----KMLE 577
+L + ++ D +E+ + C + P RP +++L +MLE
Sbjct: 248 YRLEKPLNCD----------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 290
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 119
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 173
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 309 LGRGGFGIVYKGCFS-----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
LG G FG V C+ G +VAVK LK ++ E++ + H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 364 CGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ 421
G C + E+ LV Y+P GS LRD++ R ++ A+ A G+ YLH Q
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGS----LRDYL-PRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 422 CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD--HRDSHVTTAVRGTVGHIAPEYLS 479
IHR++ A N+LLD D +GDFGLAK + H V V APE L
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
+ +DV+ FG+ L EL+T
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 131/306 (42%), Gaps = 52/306 (16%)
Query: 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGAL-------VAVKRLKDYNIAGGEV 343
Y E A + LG+G FG+VY+G + G + VA+K + + +
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 344 QFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRD---HIHGRPAL- 399
+F E + +++RL G S L++ M G + S LR + P L
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 400 --DWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457
++ ++A A G+ YL+ K +HRD+ A N ++ EDF +GDFG+
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT----- 185
Query: 458 RDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRA 511
RD + T R V ++PE L G + +DV+ FG++L E+ T
Sbjct: 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------L 236
Query: 512 ANQ--RGVMLDWVKKLHQEGKLSQMVDK--DLKGNFDRIELEEMVQVALLCTQFNPLHRP 567
A Q +G+ + V + EG L D D+ + ++ +C Q+NP RP
Sbjct: 237 AEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----------LFELMRMCWQYNPKMRP 285
Query: 568 KMSEVL 573
E++
Sbjct: 286 SFLEII 291
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 306 KNILGRGGFGIVYKGCFSDGAL---VAVKRLKDYNIAGGEVQFQTEVETI-SLAVHRNLL 361
++++G G FG V K L A+KR+K+Y F E+E + L H N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDH--IHGRPALDWARRK----------RIAL 409
L G C L Y P+G++ LR + PA A A
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRG 468
ARG+ YL ++ + IHRD+ A NIL+ E++ A + DFGL++ ++ +V T R
Sbjct: 150 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 203
Query: 469 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQE 528
V +A E L+ + +DV+ +G+LL E+++ G + +KL Q
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS------LGGTPYCGMTCAELYEKLPQG 257
Query: 529 GKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVL----KMLE 577
+L + ++ D +E+ + C + P RP +++L +MLE
Sbjct: 258 YRLEKPLNCD----------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 8/196 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E +V YM G + L+ + G+ L + +A A G+ Y+ +H
Sbjct: 84 -EEPIYIVMEYMSKGCLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 489 VFGFGILLLELITGQR 504
V+ FGILL EL T R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 121
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 175
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 309 LGRGGFGIVYKGCFS-----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
LG G FG V C+ G +VAVK LK ++ E++ + H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 364 CGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ 421
G C + E+ LV Y+P GS LRD++ R ++ A+ A G+ YLH Q
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGS----LRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 422 CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD--HRDSHVTTAVRGTVGHIAPEYLS 479
IHR++ A N+LLD D +GDFGLAK + H V V APE L
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
+ +DV+ FG+ L EL+T
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G V L+ D R
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK----LSKFDEQRTATYITE 121
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S + GT+
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLXGTL 175
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 133
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+
Sbjct: 134 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 187
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 188 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPA--LDWARRKRIALGTARGLLYLHEQCDPKI 426
E +V YM GS L D + G L + ++ A G+ Y+
Sbjct: 81 -EEPIYIVTEYMNKGS----LLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM---NY 132
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEK 486
+HRD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 487 TDVFGFGILLLELITGQR 504
+DV+ FGILL EL T R
Sbjct: 193 SDVWSFGILLTELTTKGR 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE--AFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPA--LDWARRKRIALGTARGLLYLHEQCDPKI 426
E +V YM GS L D + G L + ++ A G+ Y+
Sbjct: 81 -EEPIYIVTEYMNKGS----LLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM---NY 132
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEK 486
+HRD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 487 TDVFGFGILLLELITGQR 504
+DV+ FGILL EL T R
Sbjct: 193 SDVWSFGILLTELTTKGR 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 8/196 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG+G FG V+ G ++ VA+K LK ++ F E + + H L++L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E +V YM G + L+ + G+ L + +A A G+ Y+ +H
Sbjct: 84 -EEPIYIVTEYMSKGCLLDFLKGEM-GK-YLRLPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 489 VFGFGILLLELITGQR 504
V+ FGILL EL T R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 134/305 (43%), Gaps = 41/305 (13%)
Query: 291 YTFKELRAATSNFSAK---------NILGRGGFGIVYKGCFS----DGALVAVKRLKDYN 337
+TF++ A F+ + ++G G FG V G VA+K LK
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 338 IAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP 397
F +E + H N++ L G + +++ +M NGS+ S LR +
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 398 ALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL-- 455
+ R G A G+ YL D +HRD+ A NIL++ + V DFGL++ L
Sbjct: 134 VIQLVGMLR---GIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
Query: 456 DHRDSHVTTAVRGTVG--HIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAA 512
D D T+A+ G + APE + + + +DV+ +GI++ E+++ G+R +
Sbjct: 188 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMT 245
Query: 513 NQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEV 572
NQ D + + Q+ +L +D + Q+ L C Q + HRPK ++
Sbjct: 246 NQ-----DVINAIEQDYRLPPPMDCP----------SALHQLMLDCWQKDRNHRPKFGQI 290
Query: 573 LKMLE 577
+ L+
Sbjct: 291 VNTLD 295
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 119
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 173
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVETISLA 355
A +F LG+G FG VY + A+K L + AG E Q + EVE S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
H N+LRL G+ L+ Y P G+V L+ D R A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAP 475
Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPP 175
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQ 503
E + EK D++ G+L E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ Y+P GS+ L+ H + +D + + +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGT 132
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHRD+ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 131/306 (42%), Gaps = 52/306 (16%)
Query: 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGAL-------VAVKRLKDYNIAGGEV 343
Y E A + LG+G FG+VY+G + G + VA+K + + +
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 344 QFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRD---HIHGRPAL- 399
+F E + +++RL G S L++ M G + S LR + P L
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 400 --DWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457
++ ++A A G+ YL+ K +HRD+ A N ++ EDF +GDFG+
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT----- 178
Query: 458 RDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRA 511
RD + T R V ++PE L G + +DV+ FG++L E+ T
Sbjct: 179 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------L 229
Query: 512 ANQ--RGVMLDWVKKLHQEGKLSQMVDK--DLKGNFDRIELEEMVQVALLCTQFNPLHRP 567
A Q +G+ + V + EG L D D+ + ++ +C Q+NP RP
Sbjct: 230 AEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----------LFELMRMCWQYNPKMRP 278
Query: 568 KMSEVL 573
E++
Sbjct: 279 SFLEII 284
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 31/240 (12%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
S+ +LG+G FG K + G ++ +K L ++ + F EV+ + H N
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPN 68
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+L+ G + + Y+ G++ ++ P W++R A A G+ YLH
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP---WSQRVSFAKDIASGMAYLH 125
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL-------------LDHRDSHVTTAV 466
IIHRD+ + N L+ E+ VV DFGLA+L L D V
Sbjct: 126 SM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 467 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG--------QRALDFGRAANQRGVM 518
G +APE ++ EK DVF FGI+L E+I R +DFG N RG +
Sbjct: 183 VGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG--LNVRGFL 240
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 121
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 175
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 131/306 (42%), Gaps = 52/306 (16%)
Query: 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGAL-------VAVKRLKDYNIAGGEV 343
Y E A + LG+G FG+VY+G + G + VA+K + + +
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 344 QFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRD---HIHGRPAL- 399
+F E + +++RL G S L++ M G + S LR + P L
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 400 --DWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457
++ ++A A G+ YL+ K +HRD+ A N ++ EDF +GDFG+
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT----- 178
Query: 458 RDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRA 511
RD + T R V ++PE L G + +DV+ FG++L E+ T
Sbjct: 179 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------L 229
Query: 512 ANQ--RGVMLDWVKKLHQEGKLSQMVDK--DLKGNFDRIELEEMVQVALLCTQFNPLHRP 567
A Q +G+ + V + EG L D D+ + ++ +C Q+NP RP
Sbjct: 230 AEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----------LFELMRMCWQYNPKMRP 278
Query: 568 KMSEVL 573
E++
Sbjct: 279 SFLEII 284
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ Y+P GS+ L+ H +D + + +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAE---RIDHIKLLQYTSQICKGMEYLGT 135
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHRD+ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 105/204 (51%), Gaps = 20/204 (9%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL- 361
LG+G FG V + C D GALVAVK+L+ ++ + FQ E++ + A+H + +
Sbjct: 15 LGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILK-ALHSDFIV 71
Query: 362 --RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
R + E LV Y+P+G + L+ H R LD +R + +G+ YL
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLG 128
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL--LDHRDSHVTTAVRGTVGHIAPEY 477
+ + +HRD+ A NIL++ + + DFGLAKL LD V + + APE
Sbjct: 129 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 478 LSTGQSSEKTDVFGFGILLLELIT 501
LS S ++DV+ FG++L EL T
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVETISLA 355
A +F LG+G FG VY + A+K L + AG E Q + EVE S
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
H N+LRL G+ L+ Y P G+V L+ D R A L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 120
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAP 475
Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ P
Sbjct: 121 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPP 174
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQ 503
E + EK D++ G+L E + G+
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 117
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+
Sbjct: 118 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTL 171
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 121
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTL 175
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 116
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+
Sbjct: 117 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTL 170
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 133/291 (45%), Gaps = 32/291 (10%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEV 349
KEL A +N S ++G G FG V G VA+K LK F E
Sbjct: 11 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 350 ETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ H N++RL G + ++V M NGS+ S LR H + R
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR--- 125
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVR 467
G A G+ YL D +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 126 GIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLH 526
+ +PE ++ + + +DV+ +GI+L E+++ G+R + +NQ D +K +
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVD 235
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ +L +D + Q+ L C Q + +RPK +++ +L+
Sbjct: 236 EGYRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 132/302 (43%), Gaps = 44/302 (14%)
Query: 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGAL-------VAVKRLKDYNIAGGEV 343
Y E A + LG+G FG+VY+G + G + VA+K + + +
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 344 QFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRD---HIHGRPAL- 399
+F E + +++RL G S L++ M G + S LR + P L
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 400 --DWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457
++ ++A A G+ YL+ K +HRD+ A N ++ EDF +GDFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 458 RDSHVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ- 514
D + +G V ++PE L G + +DV+ FG++L E+ T A Q
Sbjct: 185 TD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP 234
Query: 515 -RGVMLDWVKKLHQEGKLSQMVDK--DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSE 571
+G+ + V + EG L D D+ + ++ +C Q+NP RP E
Sbjct: 235 YQGLSNEQVLRFVMEGGLLDKPDNCPDM-----------LFELMRMCWQYNPKMRPSFLE 283
Query: 572 VL 573
++
Sbjct: 284 II 285
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ ++P GS+ L+ H + +D + + +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKH---KERIDHIKLLQYTSQICKGMEYLGT 135
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHRD+ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 305 AKNILGRGGFGIVYKGCFSDGAL----VAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL 360
+ ++G+G FG+VY G + D A A+K L F E + H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 361 LRLCG-FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG--TARGLLY 417
L L G E ++ PYM +G + +R P + + I+ G ARG+ Y
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS-----PQRNPTVKDLISFGLQVARGMEY 139
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT---VGHIA 474
L EQ K +HRD+ A N +LDE F V DFGLA+ + R+ + R V A
Sbjct: 140 LAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTA 196
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELIT 501
E L T + + K+DV+ FG+LL EL+T
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 141/315 (44%), Gaps = 36/315 (11%)
Query: 270 QIFFDVNDQYDPEVSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFS----DG 325
+ F D + DP ++ KEL A +N S ++G G FG V G
Sbjct: 20 RTFVDPHTFEDPTQTVHEFA----KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 326 ALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSV 385
VA+K LK F E + H N++RL G + ++V M NGS+
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 386 ASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV 445
S LR H + R G A G+ YL D +HRD+ A NIL++ +
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGAVHRDLAARNILINSNLVCK 187
Query: 446 VGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-G 502
V DFGL+++L D ++ T + + +PE ++ + + +DV+ +GI+L E+++ G
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 503 QRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFN 562
+R + +NQ D +K + + +L +D + Q+ L C Q +
Sbjct: 248 ERP--YWEMSNQ-----DVIKAVDEGYRLPPPMDCP----------AALYQLMLDCWQKD 290
Query: 563 PLHRPKMSEVLKMLE 577
+RPK +++ +L+
Sbjct: 291 RNNRPKFEQIVSILD 305
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVETISLA 355
A +F LG+G FG VY + A+K L + AG E Q + EVE S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
H N+LRL G+ L+ Y P G+V L+ D R A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAP 475
Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTELCGTLDYLPP 175
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQ 503
E + EK D++ G+L E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVETISLA 355
A +F LG+G FG VY + A+K L + AG E Q + EVE S
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
H N+LRL G+ L+ Y P G+V L+ D R A L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 125
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAP 475
Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ P
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPP 179
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQ 503
E + EK D++ G+L E + G+
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 132/309 (42%), Gaps = 58/309 (18%)
Query: 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGAL-------VAVKRLKDYNIAGGEV 343
Y E A + LG+G FG+VY+G + G + VA+K + + +
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 344 QFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPAL---- 399
+F E + +++RL G S L++ M G + S LR RPA+
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL---RPAMANNP 130
Query: 400 -----DWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454
++ ++A A G+ YL+ K +HRD+ A N ++ EDF +GDFG+
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT-- 185
Query: 455 LDHRDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508
RD + T R V ++PE L G + +DV+ FG++L E+ T
Sbjct: 186 ---RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------- 235
Query: 509 GRAANQ--RGVMLDWVKKLHQEGKLSQMVDK--DLKGNFDRIELEEMVQVALLCTQFNPL 564
A Q +G+ + V + EG L D D+ + ++ +C Q+NP
Sbjct: 236 --LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----------LFELMRMCWQYNPK 282
Query: 565 HRPKMSEVL 573
RP E++
Sbjct: 283 MRPSFLEII 291
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 133/291 (45%), Gaps = 32/291 (10%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEV 349
KEL A +N S ++G G FG V G VA+K LK F E
Sbjct: 40 KELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 350 ETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ H N++RL G + ++V M NGS+ S LR H + R
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR--- 154
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVR 467
G A G+ YL D +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLH 526
+ +PE ++ + + +DV+ +GI+L E+++ G+R + +NQ D +K +
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVD 264
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ +L +D + Q+ L C Q + +RPK +++ +L+
Sbjct: 265 EGYRLPPPMDCP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 44/302 (14%)
Query: 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGAL-------VAVKRLKDYNIAGGEV 343
Y E A + LG+G FG+VY+G + G + VA+K + + +
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 344 QFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRD---HIHGRPAL- 399
+F E + +++RL G S L++ M G + S LR + P L
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 400 --DWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457
++ ++A A G+ YL+ K +HRD+ A N ++ EDF +GDFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 458 RDSHVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ- 514
D +G V ++PE L G + +DV+ FG++L E+ T A Q
Sbjct: 185 TDXXRKGG-KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP 234
Query: 515 -RGVMLDWVKKLHQEGKLSQMVDK--DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSE 571
+G+ + V + EG L D D+ + ++ +C Q+NP RP E
Sbjct: 235 YQGLSNEQVLRFVMEGGLLDKPDNCPDM-----------LFELMRMCWQYNPKMRPSFLE 283
Query: 572 VL 573
++
Sbjct: 284 II 285
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVETISLA 355
A +F LG+G FG VY + A+K L + AG E Q + EVE S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
H N+LRL G+ L+ Y P G+V L+ D R A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAP 475
Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDYLPP 175
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQ 503
E + EK D++ G+L E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVETISLA 355
A +F LG+G FG VY + A+K L + AG E Q + EVE S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
H N+LRL G+ L+ Y P G+V L+ D R A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 124
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAP 475
Y H + ++IHRD+K N+LL E + DFG + H S A+ GT+ ++ P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPP 178
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQ 503
E + EK D++ G+L E + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVETISLA 355
A +F LG+G FG VY + A+K L + AG E Q + EVE S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
H N+LRL G+ L+ Y P G+V L+ D R A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAP 475
Y H + ++IHRD+K N+LL E + DFG + H S A+ GT+ ++ P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPP 175
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQ 503
E + EK D++ G+L E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVETISLA 355
A +F LG+G FG VY + A+K L + AG E Q + EVE S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
H N+LRL G+ L+ Y P G+V L+ D R A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAP 475
Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPP 175
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQ 503
E + EK D++ G+L E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 130/304 (42%), Gaps = 48/304 (15%)
Query: 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGAL-------VAVKRLKDYNIAGGEV 343
Y E A + LG+G FG+VY+G + G + VA+K + + +
Sbjct: 2 YVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 344 QFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRD---HIHGRPAL- 399
+F E + +++RL G S L++ M G + S LR + P L
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 400 --DWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457
++ ++A A G+ YL+ K +HRD+ A N + EDF +GDFG+
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMT----- 172
Query: 458 RDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRA 511
RD + T R V ++PE L G + +DV+ FG++L E+ T
Sbjct: 173 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------L 223
Query: 512 ANQ--RGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKM 569
A Q +G+ + V + EG L D N + LE M +C Q+NP RP
Sbjct: 224 AEQPYQGLSNEQVLRFVMEGGLLDKPD-----NCPDMLLELM----RMCWQYNPKMRPSF 274
Query: 570 SEVL 573
E++
Sbjct: 275 LEII 278
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 133/305 (43%), Gaps = 50/305 (16%)
Query: 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGAL-------VAVKRLKDYNIAGGEV 343
Y E A + LG+G FG+VY+G + G + VA+K + + +
Sbjct: 5 YVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 344 QFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPAL---- 399
+F E + +++RL G S L++ M G + S LR RPA+
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL---RPAMANNP 120
Query: 400 -----DWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454
++ ++A A G+ YL+ K +HRD+ A N ++ EDF +GDFG+ +
Sbjct: 121 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 177
Query: 455 LDHRDSHVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAA 512
+ D + +G V ++PE L G + +DV+ FG++L E+ T A
Sbjct: 178 IYETD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LA 227
Query: 513 NQ--RGVMLDWVKKLHQEGKLSQMVDK--DLKGNFDRIELEEMVQVALLCTQFNPLHRPK 568
Q +G+ + V + EG L D D+ + ++ +C Q+NP RP
Sbjct: 228 EQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-----------LFELMRMCWQYNPKMRPS 276
Query: 569 MSEVL 573
E++
Sbjct: 277 FLEII 281
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 307 NILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
+LG G FG VYKG + +G V A+K L + V+F E ++ H +L+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTARGLLYL 418
RL G C + +L V MP+G + + +H I + L+W + A+G++YL
Sbjct: 104 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWC------VQIAKGMMYL 156
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTT-AVRGTVGHIAPEY 477
E+ +++HRD+ A N+L+ + DFGLA+LL+ + + + +A E
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 478 LSTGQSSEKTDVFGFGILLLELIT 501
+ + + ++DV+ +G+ + EL+T
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 307 NILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
+LG G FG VYKG + +G V A+K L + V+F E ++ H +L+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTARGLLYL 418
RL G C + +L V MP+G + + +H I + L+W + A+G++YL
Sbjct: 81 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWC------VQIAKGMMYL 133
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTT-AVRGTVGHIAPEY 477
E+ +++HRD+ A N+L+ + DFGLA+LL+ + + + +A E
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 478 LSTGQSSEKTDVFGFGILLLELIT 501
+ + + ++DV+ +G+ + EL+T
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 130/296 (43%), Gaps = 40/296 (13%)
Query: 295 ELRAATSNFSAKNILGRGGFGIVYKGCFSDGAL-------VAVKRLKDYNIAGGEVQFQT 347
E A + LG+G FG+VY+G + G + VA+K + + ++F
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRD---HIHGRPAL---DW 401
E + +++RL G S L++ M G + S LR + P L
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 402 ARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH 461
++ ++A A G+ YL+ K +HRD+ A N ++ EDF +GDFG+ + + D
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 462 VTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ--RGV 517
+G V ++PE L G + +DV+ FG++L E+ T A Q +G+
Sbjct: 180 RKGG-KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQPYQGL 229
Query: 518 MLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVL 573
+ V + EG L D N + LE M +C Q+NP RP E++
Sbjct: 230 SNEQVLRFVMEGGLL-----DKPDNCPDMLLELM----RMCWQYNPKMRPSFLEII 276
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVETISLA 355
A +F LG+G FG VY + A+K L + AG E Q + EVE S
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
H N+LRL G+ L+ Y P G+V L+ D R A L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 118
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAP 475
Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ P
Sbjct: 119 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPP 172
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQ 503
E + EK D++ G+L E + G+
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 130/302 (43%), Gaps = 52/302 (17%)
Query: 295 ELRAATSNFSAKNILGRGGFGIVYKGCFSDGAL-------VAVKRLKDYNIAGGEVQFQT 347
E A + LG+G FG+VY+G + G + VA+K + + ++F
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLN 68
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRD---HIHGRPAL---DW 401
E + +++RL G S L++ M G + S LR + P L
Sbjct: 69 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 128
Query: 402 ARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH 461
++ ++A A G+ YL+ K +HRD+ A N ++ EDF +GDFG+ RD +
Sbjct: 129 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIY 180
Query: 462 VTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ- 514
T R V ++PE L G + +DV+ FG++L E+ T A Q
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP 231
Query: 515 -RGVMLDWVKKLHQEGKLSQMVDK--DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSE 571
+G+ + V + EG L D D+ + ++ +C Q+NP RP E
Sbjct: 232 YQGLSNEQVLRFVMEGGLLDKPDNCPDM-----------LFELMRMCWQYNPKMRPSFLE 280
Query: 572 VL 573
++
Sbjct: 281 II 282
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 131/298 (43%), Gaps = 44/298 (14%)
Query: 295 ELRAATSNFSAKNILGRGGFGIVYKGCFSDGAL-------VAVKRLKDYNIAGGEVQFQT 347
E A + LG+G FG+VY+G + G + VA+K + + ++F
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRD---HIHGRPAL---DW 401
E + +++RL G S L++ M G + S LR + P L
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 402 ARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH 461
++ ++A A G+ YL+ K +HRD+ A N ++ EDF +GDFG+ + + D +
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-Y 180
Query: 462 VTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ--RGV 517
+G V ++PE L G + +DV+ FG++L E+ T A Q +G+
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQPYQGL 231
Query: 518 MLDWVKKLHQEGKLSQMVDK--DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVL 573
+ V + EG L D D+ + ++ +C Q+NP RP E++
Sbjct: 232 SNEQVLRFVMEGGLLDKPDNCPDM-----------LFELMRMCWQYNPKMRPSFLEII 278
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG+G FG V + C D G +VAVK+L+ ++ F+ E+E + H N+++
Sbjct: 19 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 363 LCGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C + R L+ Y+P GS+ L+ H + +D + + +G+ YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGT 133
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + IHR++ NIL++ + +GDFGL K+L D V + APE L
Sbjct: 134 K---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 479 STGQSSEKTDVFGFGILLLELIT 501
+ + S +DV+ FG++L EL T
Sbjct: 191 TESKFSVASDVWSFGVVLYELFT 213
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 118
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + +FG + H S T + GT+
Sbjct: 119 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTL 172
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 119
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + +FG + H S T + GT+
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTL 173
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 91/204 (44%), Gaps = 13/204 (6%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVETISLAVHR 358
+F LG+G FG VY + A+K L + AG E Q + EVE S H
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 359 NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYL 418
N+LRL G+ L+ Y P G+V L+ D R A L Y
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSRFDEQRTATYITELANALSYC 128
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL 478
H + ++IHRD+K N+LL + E + DFG + H S T + GT+ ++ PE +
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMI 182
Query: 479 STGQSSEKTDVFGFGILLLELITG 502
EK D++ G+L E + G
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 306 KNILGRGGFGIVYKGCFSDGAL---VAVKRLKDYNIAGGEVQFQTEVETI-SLAVHRNLL 361
++++G G FG V K L A+KR+K+Y F E+E + L H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDH--IHGRPALDWARRK----------RIAL 409
L G C L Y P+G++ LR + PA A A
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRG 468
ARG+ YL ++ + IHR++ A NIL+ E++ A + DFGL++ ++ +V T R
Sbjct: 147 DVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 200
Query: 469 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQE 528
V +A E L+ + +DV+ +G+LL E+++ G + +KL Q
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS------LGGTPYCGMTCAELYEKLPQG 254
Query: 529 GKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVL----KMLE 577
+L + ++ D +E+ + C + P RP +++L +MLE
Sbjct: 255 YRLEKPLNCD----------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 297
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 117
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S + GT+
Sbjct: 118 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDTLCGTL 171
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 118
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S + GT+
Sbjct: 119 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTL 172
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 309 LGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEV--QFQTEVETISLAVHRNLLR 362
LG G FG+V +G + VAVK LK ++ E F EV + HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
L G T ++ V P GS+ RLR H G L R A+ A G+ YL +
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKH-QGHFLL--GTLSRYAVQVAEGMGYLESK- 134
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV--GHIAPEYLST 480
+ IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 481 GQSSEKTDVFGFGILLLELIT 501
S +D + FG+ L E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 119
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S + GT+
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTL 173
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K+ + A +F LG+G FG VY + A+K L + AG E Q + EVE
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
S H N+LRL G+ L+ Y P G+V L+ D R
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITE 142
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
A L Y H + ++IHRD+K N+LL E + DFG + H S + GT+
Sbjct: 143 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTL 196
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
++ PE + EK D++ G+L E + G+
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 309 LGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEV--QFQTEVETISLAVHRNLLR 362
LG G FG+V +G + VAVK LK ++ E F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
L G T ++ V P GS+ RLR H G L R A+ A G+ YL +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKH-QGHFLL--GTLSRYAVQVAEGMGYLESK- 130
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV--GHIAPEYLST 480
+ IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 481 GQSSEKTDVFGFGILLLELIT 501
S +D + FG+ L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 309 LGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEV--QFQTEVETISLAVHRNLLR 362
LG G FG+V +G + VAVK LK ++ E F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
L G T ++ V P GS+ RLR H G L R A+ A G+ YL +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKH-QGHFLL--GTLSRYAVQVAEGMGYLESK- 130
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV--GHIAPEYLST 480
+ IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 481 GQSSEKTDVFGFGILLLELIT 501
S +D + FG+ L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 309 LGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEV--QFQTEVETISLAVHRNLLR 362
LG G FG+V +G + VAVK LK ++ E F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
L G T ++ V P GS+ RLR H G L R A+ A G+ YL +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKH-QGHFLL--GTLSRYAVQVAEGMGYLESK- 130
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV--GHIAPEYLST 480
+ IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 481 GQSSEKTDVFGFGILLLELIT 501
S +D + FG+ L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 309 LGRGGFGIVYKGCFS-----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRL 363
LG G FG V C+ G +VAVK LK ++ E++ + H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 364 CGFCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ 421
G C LV Y+P GS LRD++ R ++ A+ A G+ YLH Q
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGS----LRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 422 CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYLS 479
IHRD+ A N+LLD D +GDFGLAK + H V V APE L
Sbjct: 154 ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 480 TGQSSEKTDVFGFGILLLELIT 501
+ +DV+ FG+ L EL+T
Sbjct: 211 EYKFYYASDVWSFGVTLYELLT 232
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 20/204 (9%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL- 361
LG+G FG V + C D GALVAVK+L+ ++ + FQ E++ + A+H + +
Sbjct: 18 LGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILK-ALHSDFIV 74
Query: 362 --RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
R + LV Y+P+G + L+ H R LD +R + +G+ YL
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLG 131
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD-HRDSHVTTAV-RGTVGHIAPEY 477
+ + +HRD+ A NIL++ + + DFGLAKLL +D +V + + APE
Sbjct: 132 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 478 LSTGQSSEKTDVFGFGILLLELIT 501
LS S ++DV+ FG++L EL T
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 309 LGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEV--QFQTEVETISLAVHRNLLR 362
LG G FG+V +G + VAVK LK ++ E F EV + HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
L G T ++ V P GS+ RLR H G L R A+ A G+ YL +
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKH-QGHFLL--GTLSRYAVQVAEGMGYLESK- 140
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV--GHIAPEYLST 480
+ IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 481 GQSSEKTDVFGFGILLLELIT 501
S +D + FG+ L E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 295 ELRAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLK-DYNIAGGEVQF-QTEVET 351
+++ +F +LG+G FG V+ F A+K LK D + +V+ E
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 352 ISLAVHRNLL--RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+SLA L C F + EN V Y+ G + HI D +R A
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKEN-LFFVMEYLNGGDLMY----HIQSCHKFDLSRATFYAA 126
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT 469
GL +LH + I++RD+K NILLD+D + DFG+ K D+ T GT
Sbjct: 127 EIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGT 182
Query: 470 VGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
+IAPE L + + D + FG+LL E++ GQ
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 309 LGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEV--QFQTEVETISLAVHRNLLR 362
LG G FG+V +G + VAVK LK ++ E F EV + HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
L G T ++ V P GS+ RLR H G L R A+ A G+ YL +
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKH-QGHFLL--GTLSRYAVQVAEGMGYLESK- 134
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV--GHIAPEYLST 480
+ IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 481 GQSSEKTDVFGFGILLLELIT 501
S +D + FG+ L E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 108/237 (45%), Gaps = 42/237 (17%)
Query: 287 HLKRYTFKELRAATSNFSAKNILGRGGFGIVYKG-CFS-----DGALVAVKRLKDYNIAG 340
H+KR+ N K LG G FG V+ C++ D LVAVK LKD +
Sbjct: 9 HIKRH----------NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DN 57
Query: 341 GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH-------I 393
F E E ++ H ++++ G C + ++V+ YM +G + LR H
Sbjct: 58 ARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMA 117
Query: 394 HGRPALDWARRK--RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGL 451
G P + + + IA A G++YL Q +HRD+ N L+ E+ +GDFG+
Sbjct: 118 EGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGM 174
Query: 452 AKLLDHRDSHVTTAVRGTVGH-------IAPEYLSTGQSSEKTDVFGFGILLLELIT 501
+ RD + T R GH + PE + + + ++DV+ G++L E+ T
Sbjct: 175 S-----RDVYSTDYYR-VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 309 LGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEV--QFQTEVETISLAVHRNLLR 362
LG G FG+V +G + VAVK LK ++ E F EV + HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
L G T ++ V P GS+ RLR H G L R A+ A G+ YL +
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKH-QGHFLL--GTLSRYAVQVAEGMGYLESK- 140
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV--GHIAPEYLST 480
+ IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 481 GQSSEKTDVFGFGILLLELIT 501
S +D + FG+ L E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 20/204 (9%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL- 361
LG+G FG V + C D GALVAVK+L+ ++ + FQ E++ + A+H + +
Sbjct: 31 LGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILK-ALHSDFIV 87
Query: 362 --RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
R + LV Y+P+G + L+ H R LD +R + +G+ YL
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLG 144
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD-HRDSHVTTAV-RGTVGHIAPEY 477
+ + +HRD+ A NIL++ + + DFGLAKLL +D +V + + APE
Sbjct: 145 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 478 LSTGQSSEKTDVFGFGILLLELIT 501
LS S ++DV+ FG++L EL T
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 20/204 (9%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL- 361
LG+G FG V + C D GALVAVK+L+ ++ + FQ E++ + A+H + +
Sbjct: 19 LGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILK-ALHSDFIV 75
Query: 362 --RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
R + LV Y+P+G + L+ H R LD +R + +G+ YL
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLG 132
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD-HRDSHVTTAV-RGTVGHIAPEY 477
+ + +HRD+ A NIL++ + + DFGLAKLL +D +V + + APE
Sbjct: 133 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 478 LSTGQSSEKTDVFGFGILLLELIT 501
LS S ++DV+ FG++L EL T
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 13/208 (6%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVETISLA 355
A +F LG+G FG VY + A+K L + AG E Q + EVE S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
H N+LRL G+ L+ Y P G+V L+ D R A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 121
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAP 475
Y H + ++IHRD+K N+LL E + DFG + H S + GT+ ++ P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLPP 175
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQ 503
E + EK D++ G+L E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 13/208 (6%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVETISLA 355
A +F LG+G FG VY + A+K L + AG E Q + EVE S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
H N+LRL G+ L+ Y P G+V L+ D R A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANAL 124
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAP 475
Y H + ++IHRD+K N+LL E + DFG + H S + GT+ ++ P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPP 178
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQ 503
E + EK D++ G+L E + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 295 ELRAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLK-DYNIAGGEVQF-QTEVET 351
+++ +F +LG+G FG V+ F A+K LK D + +V+ E
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 352 ISLAVHRNLL--RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+SLA L C F + EN V Y+ G + HI D +R A
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKEN-LFFVMEYLNGGDLMY----HIQSCHKFDLSRATFYAA 125
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT 469
GL +LH + I++RD+K NILLD+D + DFG+ K D+ T GT
Sbjct: 126 EIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGT 181
Query: 470 VGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
+IAPE L + + D + FG+LL E++ GQ
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
+G+G FG V G + G VAVK +K+ A F E ++ H NL++L G
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 256
Query: 369 TENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
E L +V YM GS+ LR GR L + +L + YL +
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFV 311
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HRD+ A N+L+ ED A V DFGL K V+ T APE L + S K+
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKS 367
Query: 488 DVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKL 531
DV+ FGILL E+ + FGR R + D V ++ + K+
Sbjct: 368 DVWSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKGYKM 405
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ ++ VAVK +K +++ F E + H L++L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE--AFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E ++ +M GS+ L+ + L + + A G+ ++ ++ IH
Sbjct: 81 KE-PIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIH 134
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + DFGLA++++ + + + APE ++ G + K+D
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 194
Query: 489 VFGFGILLLELITGQR 504
V+ FGILL+E++T R
Sbjct: 195 VWSFGILLMEIVTYGR 210
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
+G+G FG V G + G VAVK +K+ A F E ++ H NL++L G
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 69
Query: 369 TENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
E L +V YM GS+ LR GR L + +L + YL +
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFV 124
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HRD+ A N+L+ ED A V DFGL K V+ T APE L + S K+
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKS 180
Query: 488 DVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKL 531
DV+ FGILL E+ + FGR R + D V ++ + K+
Sbjct: 181 DVWSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKGYKM 218
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
+G+G FG V G + G VAVK +K+ A F E ++ H NL++L G
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 84
Query: 369 TENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
E L +V YM GS+ LR GR L + +L + YL +
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFV 139
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HRD+ A N+L+ ED A V DFGL K V+ T APE L + S K+
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKS 195
Query: 488 DVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKL 531
DV+ FGILL E+ + FGR R + D V ++ + K+
Sbjct: 196 DVWSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKGYKM 233
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 13/204 (6%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVETISLAVHR 358
+F LG+G FG VY + A+K L + AG E Q + EVE S H
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 359 NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYL 418
N+LRL G+ L+ Y P G+V L+ D R A L Y
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSRFDEQRTATYITELANALSYC 128
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL 478
H + ++IHRD+K N+LL + E + DFG + H S + GT+ ++ PE +
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRDTLCGTLDYLPPEMI 182
Query: 479 STGQSSEKTDVFGFGILLLELITG 502
EK D++ G+L E + G
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 101/224 (45%), Gaps = 20/224 (8%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
+G+G FG V G + G VAVK +K+ A F E ++ H NL++L G
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 75
Query: 369 TENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
E L +V YM GS+ LR GR L + +L + YL +
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFV 130
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HRD+ A N+L+ ED A V DFGL K V+ T APE L S K+
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREAAFSTKS 186
Query: 488 DVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKL 531
DV+ FGILL E+ + FGR R + D V ++ + K+
Sbjct: 187 DVWSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKGYKM 224
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 32/281 (11%)
Query: 306 KNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
+ ++G G FG V G VA+K LK F +E + H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ 421
L G + +++ +M NGS+ S LR + + R G A G+ YL
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL--- 125
Query: 422 CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVG--HIAPEY 477
D +HR + A NIL++ + V DFGL++ L D D T+A+ G + APE
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 478 LSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536
+ + + +DV+ +GI++ E+++ G+R + NQ D + + Q+ +L +D
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMTNQ-----DVINAIEQDYRLPPPMD 238
Query: 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ Q+ L C Q + HRPK +++ L+
Sbjct: 239 CP----------SALHQLMLDCWQKDRNHRPKFGQIVNTLD 269
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 125/285 (43%), Gaps = 25/285 (8%)
Query: 302 NFSAKNILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL 360
++ + ++G G +V C VA+KR+ + E++ +S H N+
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 361 LRLCGFCSTENERLLVYPYMPNGSVASRLRDHI-----HGRPALDWARRKRIALGTARGL 415
+ ++E LV + GSV ++ HI H LD + I GL
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIK-HIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL----DHRDSHVTTAVRGTVG 471
YLH+ IHRDVKA NILL ED + DFG++ L D + V GT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 472 HIAPEYLSTGQSSE-KTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530
+APE + + + K D++ FGI +EL TG A + + + +ML +
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLMLTL---QNDPPS 241
Query: 531 LSQMV-DKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLK 574
L V DK++ + + +M+ LC Q +P RP +E+L+
Sbjct: 242 LETGVQDKEMLKKYGK-SFRKMIS---LCLQKDPEKRPTAAELLR 282
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ ++ VAVK +K +++ F E + H L++L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE--AFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E ++ +M GS+ L+ + L + + A G+ ++ ++ IH
Sbjct: 254 KE-PIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIH 307
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + DFGLA++++ + + + APE ++ G + K+D
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 367
Query: 489 VFGFGILLLELITGQR 504
V+ FGILL+E++T R
Sbjct: 368 VWSFGILLMEIVTYGR 383
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LKD +E+E + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARR-KRI--------- 407
++ L G C+ + ++ Y G+ LR+++ R P ++++ R+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGN----LREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 408 ----ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV- 462
ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ +++ D +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LK +E+E + + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARRKR----------- 406
++ L G C+ + ++ Y G+ LR+++ R P L+++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGN----LREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 407 ---IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
A ARG+ YL + K IHRD+ A N+L+ ED + DFGLA+ + H D +
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LKD +E+E + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARR-----------KR 406
++ L G C+ + ++ Y G+ LR+++ R P ++++ K
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGN----LREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 407 IALGT---ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
+ T ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ +++ D +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNIA--GGEVQFQTEVETISLAVHR 358
+F LG+G FG VY + A+K L + G E Q + E+E S H
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 359 NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYL 418
N+LR+ + L+ + P G + L+ H GR D R A L Y
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GR--FDEQRSATFMEELADALHYC 131
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL 478
HE+ K+IHRD+K N+L+ E + DFG + H S + GT+ ++ PE +
Sbjct: 132 HER---KVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMI 185
Query: 479 STGQSSEKTDVFGFGILLLELITGQRALD 507
EK D++ G+L E + G D
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 140/312 (44%), Gaps = 39/312 (12%)
Query: 282 EVSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFSD------GALVAVKRLKD 335
EV H ++ K +R LG G FG V + C D G VAVK LK
Sbjct: 12 EVDPTHFEKRFLKRIRD----------LGEGHFGKV-ELCRYDPEGDNTGEQVAVKSLKP 60
Query: 336 YNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE--NERLLVYPYMPNGSVASRLRDHI 393
+ + E+E + H N+++ G C+ + N L+ ++P+GS+ L +
Sbjct: 61 ESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN- 119
Query: 394 HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453
+ ++ ++ + A+ +G+ YL + + +HRD+ A N+L++ + + +GDFGL K
Sbjct: 120 --KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174
Query: 454 LL--DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRA 511
+ D V V APE L + +DV+ FG+ L EL+T +
Sbjct: 175 AIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDS-----D 229
Query: 512 ANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIEL-----EEMVQVALLCTQFNPLHR 566
++ + L + H + ++++V+ +G R+ +E+ Q+ C +F P +R
Sbjct: 230 SSPMALFLKMIGPTHGQMTVTRLVNTLKEGK--RLPCPPNCPDEVYQLMRKCWEFQPSNR 287
Query: 567 PKMSEVLKMLEG 578
+++ E
Sbjct: 288 TSFQNLIEGFEA 299
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LK +E+E + + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARRKR----------- 406
++ L G C+ + ++ Y G+ LR+++ R P L+++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGN----LREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 407 ---IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
A ARG+ YL + K IHRD+ A N+L+ ED + DFGLA+ + H D +
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LK +E+E + + H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARRKR----------- 406
++ L G C+ + ++ Y G+ LR+++ R P L+++
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGN----LREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 407 ---IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
A ARG+ YL + K IHRD+ A N+L+ ED + DFGLA+ + H D +
Sbjct: 145 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNIA--GGEVQFQTEVETISLAVHR 358
+F LG+G FG VY + A+K L + G E Q + E+E S H
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 359 NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYL 418
N+LR+ + L+ + P G + L+ H GR D R A L Y
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GR--FDEQRSATFMEELADALHYC 130
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL 478
HE+ K+IHRD+K N+L+ E + DFG + H S + GT+ ++ PE +
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMI 184
Query: 479 STGQSSEKTDVFGFGILLLELITGQRALD 507
EK D++ G+L E + G D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 125/285 (43%), Gaps = 25/285 (8%)
Query: 302 NFSAKNILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL 360
++ + ++G G +V C VA+KR+ + E++ +S H N+
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 361 LRLCGFCSTENERLLVYPYMPNGSVASRLRDHI-----HGRPALDWARRKRIALGTARGL 415
+ ++E LV + GSV ++ HI H LD + I GL
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIK-HIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL----DHRDSHVTTAVRGTVG 471
YLH+ IHRDVKA NILL ED + DFG++ L D + V GT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 472 HIAPEYLSTGQSSE-KTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530
+APE + + + K D++ FGI +EL TG A + + + +ML +
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLMLTL---QNDPPS 246
Query: 531 LSQMV-DKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLK 574
L V DK++ + + +M+ LC Q +P RP +E+L+
Sbjct: 247 LETGVQDKEMLKKYGK-SFRKMIS---LCLQKDPEKRPTAAELLR 287
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LK +E+E + + H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARRKR----------- 406
++ L G C+ + ++ Y G+ LR+++ R P L+++
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGN----LREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 407 ---IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
A ARG+ YL + K IHRD+ A N+L+ ED + DFGLA+ + H D +
Sbjct: 193 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 13/209 (6%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNIA--GGEVQFQTEVETISLAVHR 358
+F LG+G FG VY + A+K L + G E Q + E+E S H
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 359 NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYL 418
N+LR+ + L+ + P G + L+ H GR D R A L Y
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GR--FDEQRSATFMEELADALHYC 130
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL 478
HE+ K+IHRD+K N+L+ E + DFG + H S + GT+ ++ PE +
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMI 184
Query: 479 STGQSSEKTDVFGFGILLLELITGQRALD 507
EK D++ G+L E + G D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LK +E+E + + H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARRKR----------- 406
++ L G C+ + ++ Y G+ LR+++ R P L+++
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGN----LREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 407 ---IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
A ARG+ YL + K IHRD+ A N+L+ ED + DFGLA+ + H D +
Sbjct: 141 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 147/331 (44%), Gaps = 62/331 (18%)
Query: 280 DPEVSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCF-----SDGALVAVKRLK 334
DP + FKE + +LG G FG V+KG + S V +K ++
Sbjct: 15 DPSEKANKVLARIFKE-----TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIE 69
Query: 335 DYNIAGGEVQFQTEVETISLAV----HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLR 390
D + G FQ + + LA+ H +++RL G C + +L V Y+P GS+ +R
Sbjct: 70 DKS---GRQSFQAVTDHM-LAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVR 124
Query: 391 DHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFG 450
H R AL + A+G+ YL E ++HR++ A N+LL + V DFG
Sbjct: 125 QH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFG 178
Query: 451 LAKLLDHRDSHVT-TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509
+A LL D + + + + +A E + G+ + ++DV+ +G+ + EL+T FG
Sbjct: 179 VADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT------FG 232
Query: 510 RAANQRGVMLDWVKKLHQEG-KLSQ----------------MVDKDLKGNFDRIELEEMV 552
A G+ L V L ++G +L+Q M+D++++ F
Sbjct: 233 -AEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKE------- 284
Query: 553 QVALLCTQFNPLHR-PKMSEVLKMLEGDGLA 582
L +F + R P V+K G G+A
Sbjct: 285 ----LANEFTRMARDPPRYLVIKRESGPGIA 311
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LK +E+E + + H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARRKR----------- 406
++ L G C+ + ++ Y G+ LR+++ R P L+++
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGN----LREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 407 ---IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
A ARG+ YL + K IHRD+ A N+L+ ED + DFGLA+ + H D +
Sbjct: 144 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LKD +E+E + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARR-----------KR 406
++ L G C+ + ++ Y G+ LR+++ R P ++++ K
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGN----LREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 407 IALGT---ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
+ T ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ +++ D +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LKD +E+E + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARR-KRI--------- 407
++ L G C+ + ++ Y G+ LR+++ R P ++++ R+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGN----LREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 408 ----ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ +++ D +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 100/219 (45%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LK +E+E + + H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARRKR----------- 406
++ L G C+ + ++ Y G+ LR+++ R P L++
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGN----LREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 407 ---IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
A ARG+ YL + K IHRD+ A N+L+ ED + DFGLA+ + H D +
Sbjct: 137 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LKD +E+E + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARR-----------KR 406
++ L G C+ + ++ Y G+ LR+++ R P ++++ K
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGN----LREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 407 IALGT---ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
+ T ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ +++ D +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LKD +E+E + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARR-----------KR 406
++ L G C+ + ++ Y G+ LR+++ R P ++++ K
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGN----LREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 407 IALGT---ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
+ T ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ +++ D +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LKD +E+E + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARR-----------KR 406
++ L G C+ + ++ Y G+ LR+++ R P ++++ K
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGN----LREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 407 IALGT---ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHV 462
+ T ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ +++ D
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 100/219 (45%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LK +E+E + + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARRKR----------- 406
++ L G C+ + ++ Y G+ LR+++ R P L++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGN----LREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 407 ---IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
A ARG+ YL + K IHRD+ A N+L+ ED + DFGLA+ + H D +
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 140/304 (46%), Gaps = 57/304 (18%)
Query: 307 NILGRGGFGIVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV----H 357
+LG G FG V+KG + S V +K ++D + G FQ + + LA+ H
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS---GRQSFQAVTDHM-LAIGSLDH 74
Query: 358 RNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417
+++RL G C + +L V Y+P GS+ +R H R AL + A+G+ Y
Sbjct: 75 AHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYY 130
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVT-TAVRGTVGHIAPE 476
L E ++HR++ A N+LL + V DFG+A LL D + + + + +A E
Sbjct: 131 LEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 477 YLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEG-KLSQ-- 533
+ G+ + ++DV+ +G+ + EL+T FG A G+ L V L ++G +L+Q
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMT------FG-AEPYAGLRLAEVPDLLEKGERLAQPQ 240
Query: 534 --------------MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHR-PKMSEVLKMLEG 578
M+D++++ F L +F + R P V+K G
Sbjct: 241 ICTIDVYMVMVKCWMIDENIRPTFKE-----------LANEFTRMARDPPRYLVIKRESG 289
Query: 579 DGLA 582
G+A
Sbjct: 290 PGIA 293
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV 356
+++S F LG G + VYKG + G VA+K +K + G E+ +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP------ALDWARRKRIALG 410
H N++RL TEN+ LV+ +M N L+ ++ R L+ K
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDND-----LKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
+GL + HE KI+HRD+K N+L+++ + +GDFGLA+ + ++ V T+
Sbjct: 117 LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TL 172
Query: 471 GHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQ 503
+ AP+ L ++ S D++ G +L E+ITG+
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LKD +E+E + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARR-----------KR 406
++ L G C+ + ++ Y G+ LR+++ R P ++++ K
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGN----LREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 407 IALGT---ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
+ T ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ +++ D +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 37/226 (16%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTE--VETISLAVHRN 359
N ++GRG +G VYKG D VAVK N F E + + L H N
Sbjct: 14 NLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDN 68
Query: 360 LLRLCG-----FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
+ R E LLV Y PNGS+ L H DW R+A RG
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRG 123
Query: 415 LLYLH------EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA-KLLDHR------DSH 461
L YLH + P I HRD+ + N+L+ D V+ DFGL+ +L +R + +
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 462 VTTAVRGTVGHIAPEYLSTG-------QSSEKTDVFGFGILLLELI 500
+ GT+ ++APE L + ++ D++ G++ E+
Sbjct: 184 AAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 96/215 (44%), Gaps = 12/215 (5%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLK-DYNIAGGEVQF-QTEVETIS 353
R NF +LG+G FG V + G L AVK LK D + +V+ TE +S
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
LA + L C +RL NG L HI D AR + A
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGG---DLMFHIQKSRRFDEARARFYAAEIIS 135
Query: 414 GLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVR-GTVGH 472
L++LH D II+RD+K N+LLD + + DFG+ K + + VTTA GT +
Sbjct: 136 ALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDY 190
Query: 473 IAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507
IAPE L D + G+LL E++ G +
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 127/270 (47%), Gaps = 33/270 (12%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 85 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 137
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 138 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 193
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEG 529
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 194 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQPP 252
Query: 530 ----------KLSQMVDKDLKGNFDRIELE 549
+ M+D D + F + +E
Sbjct: 253 ICTIDVYMIMRKCWMIDADSRPKFRELIIE 282
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LKD +E+E + + H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARR-----------KR 406
++ L G C+ + ++ Y G+ LR+++ R P ++++ K
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGN----LREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 407 IALGT---ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
+ T ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ +++ D +
Sbjct: 146 LVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 132/285 (46%), Gaps = 29/285 (10%)
Query: 309 LGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG G FG V + C D G VAVK LK + + E+E + H N+++
Sbjct: 17 LGEGHFGKV-ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 363 LCGFCSTE--NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
G C+ + N L+ ++P+GS+ L + + ++ ++ + A+ +G+ YL
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGS 132
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYL 478
+ + +HRD+ A N+L++ + + +GDFGL K + D V V APE L
Sbjct: 133 R---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 479 STGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKD 538
+ +DV+ FG+ L EL+T + ++ + L + H + ++++V+
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLTYCDS-----DSSPMALFLKMIGPTHGQMTVTRLVNTL 244
Query: 539 LKGNFDRIEL-----EEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578
+G R+ +E+ Q+ C +F P +R +++ E
Sbjct: 245 KEGK--RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 287
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L++ MP G + +R+H I + L+W + A
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 131
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 132 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 187
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 244
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L++ MP G + +R+H I + L+W + A
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 128
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 129 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 184
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LKD +E+E + + H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARR-----------KR 406
++ L G C+ + ++ Y G+ LR+++ R P ++++ K
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGN----LREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 407 IALGT---ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
+ T ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ +++ D +
Sbjct: 148 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L++ MP G + +R+H I + L+W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 183
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 240
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LKD +E+E + + H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARR-----------KR 406
++ L G C+ + ++ Y G+ LR+++ R P ++++ K
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGN----LREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 407 IALGT---ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
+ T ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ +++ D +
Sbjct: 205 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LKD +E+E + + H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARR-----------KR 406
++ L G C+ + ++ Y G+ LR+++ R P ++++ K
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGN----LREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 407 IALGT---ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-V 462
+ T ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ +++ D +
Sbjct: 151 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 8/193 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG+V G + VA+K +K+ +++ E +F E + + H L++L G C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
+ ++ YM NG + + LR+ H + + + YL + + +H
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD+ A N L+++ V DFGL++ + + + + V PE L + S K+D
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 489 VFGFGILLLELIT 501
++ FG+L+ E+ +
Sbjct: 204 IWAFGVLMWEIYS 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L++ MP G + +R+H I + L+W + A
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQ-LMPFGXLLDYVREHKDNIGSQYLLNWC------VQIA 128
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 129 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 184
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 241
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 15/210 (7%)
Query: 303 FSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAGGEV-QFQTEVETISLAVHRNL 360
+ +G GGF V C G +VA+K + D N G ++ + +TE+E + H+++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQHI 70
Query: 361 LRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
+L T N+ +V Y P G L D+I + L + + + Y+H
Sbjct: 71 CQLYHVLETANKIFMVLEYCPGGE----LFDYIISQDRLSEEETRVVFRQIVSAVAYVHS 126
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGL-AKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
Q HRD+K N+L DE + + DFGL AK ++D H+ T G++ + APE L
Sbjct: 127 Q---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYAAPE-LI 181
Query: 480 TGQS--SEKTDVFGFGILLLELITGQRALD 507
G+S + DV+ GILL L+ G D
Sbjct: 182 QGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L++ MP G + +R+H I + L+W + A
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 185
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 242
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L++ MP G + +R+H I + L+W + A
Sbjct: 78 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 130
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 186
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 243
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 127/270 (47%), Gaps = 33/270 (12%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 130
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 186
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEG 529
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQPP 245
Query: 530 ----------KLSQMVDKDLKGNFDRIELE 549
+ M+D D + F + +E
Sbjct: 246 ICTIDVYMIMRKCWMIDADSRPKFRELIIE 275
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 185
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 242
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 183
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 240
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 127/270 (47%), Gaps = 33/270 (12%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 183
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEG 529
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQPP 242
Query: 530 ----------KLSQMVDKDLKGNFDRIELE 549
+ M+D D + F + +E
Sbjct: 243 ICTIDVYMIMRKCWMIDADSRPKFRELIIE 272
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 36/246 (14%)
Query: 276 NDQYDPEVSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKG-CFS-----DGALVA 329
N QY + + H+KR + K LG G FG V+ C + D LVA
Sbjct: 26 NPQYFSDACVHHIKR----------RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVA 75
Query: 330 VKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRL 389
VK LK+ + + + FQ E E +++ H++++R G C+ L+V+ YM +G + L
Sbjct: 76 VKALKEASESARQ-DFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134
Query: 390 RDHIHGRPALDWARRKRIALG-------------TARGLLYLHEQCDPKIIHRDVKAANI 436
R HG A A + +A G A G++YL +HRD+ N
Sbjct: 135 RS--HGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNC 189
Query: 437 LLDEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGIL 495
L+ + +GDFG+++ + D + V + + PE + + + ++DV+ FG++
Sbjct: 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 249
Query: 496 LLELIT 501
L E+ T
Sbjct: 250 LWEIFT 255
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQ-LMPFGXLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 183
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 240
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 100 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 152
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 153 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 208
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 209 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 265
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 130
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 186
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 243
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 130/291 (44%), Gaps = 32/291 (10%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEV 349
KE+ A S + + ++G G FG V G VA+K LK F E
Sbjct: 17 KEIEA--SCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEA 74
Query: 350 ETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ H N++ L G + ++V YM NGS+ + L+ + + R
Sbjct: 75 SIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR--- 131
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVR 467
G + G+ YL D +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 132 GISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 188
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLH 526
+ APE ++ + + +DV+ +GI++ E+++ G+R + NQ D +K +
Sbjct: 189 IPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP--YWEMTNQ-----DVIKAVE 241
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ +L +D + Q+ L C Q RPK E++ ML+
Sbjct: 242 EGYRLPSPMDCPAA----------LYQLMLDCWQKERNSRPKFDEIVNMLD 282
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LKD +E+E + + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDH----------IHGRPALDWARRKRIA- 408
++ L G C+ + ++ Y G++ LR I+ P + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 409 -LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAV 466
ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ +++ D TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 467 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++F LGRGGFG+V++ D A+KR++ N + EV+ ++ H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSV--------ASRLRDHIHGRPALDWARRK---RIA 408
++R +N + P P + L+D ++GR ++ R I
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVT----- 463
L A + +LH + ++HRD+K +NI D VGDFGL +D + T
Sbjct: 125 LQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 464 ------TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
T GT +++PE + S K D+F G++L EL+
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 100/219 (45%), Gaps = 33/219 (15%)
Query: 309 LGRGGFGIVY--------KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL-AVHRN 359
LG G FG V K + VAVK LK +E+E + + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARRKR----------- 406
++ L G C+ + ++ Y G+ LR+++ R P L+++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGN----LREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 407 ---IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHV 462
A ARG+ YL + K IHRD+ A N+L+ ED + DFGLA+ + H D
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
TT R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 69 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 121
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 122 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 177
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 234
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 130
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 186
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 243
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 81 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 133
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 134 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 189
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 190 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 246
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 8/193 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG+V G + VA+K +K+ +++ E +F E + + H L++L G C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
+ ++ YM NG + + LR+ H + + + YL + + +H
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD+ A N L+++ V DFGL++ + + + + V PE L + S K+D
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 489 VFGFGILLLELIT 501
++ FG+L+ E+ +
Sbjct: 204 IWAFGVLMWEIYS 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 134
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 190
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 247
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 8/193 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG+V G + VA+K +K+ +++ E +F E + + H L++L G C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
+ ++ YM NG + + LR+ H + + + YL + + +H
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD+ A N L+++ V DFGL++ + + + + V PE L + S K+D
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 489 VFGFGILLLELIT 501
++ FG+L+ E+ +
Sbjct: 189 IWAFGVLMWEIYS 201
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 30/220 (13%)
Query: 309 LGRGGFGIVYKG------CFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
+G G FG V++ + +VAVK LK+ A + FQ E ++ + N+++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 363 LCGFCSTENERLLVYPYMPNG--------------------SVASRLRDHIHGRPALDWA 402
L G C+ L++ YM G +++R R G P L A
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 403 RRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV 462
+ IA A G+ YL E+ K +HRD+ N L+ E+ + DFGL++ + D +
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 463 TTAVRGT-VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
+ + PE + + + ++DV+ +G++L E+ +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 8/193 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG+V G + VA+K +K+ +++ E +F E + + H L++L G C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
+ ++ YM NG + + LR+ H + + + YL + + +H
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFLH 127
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD+ A N L+++ V DFGL++ + + + + V PE L + S K+D
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 187
Query: 489 VFGFGILLLELIT 501
++ FG+L+ E+ +
Sbjct: 188 IWAFGVLMWEIYS 200
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 125/293 (42%), Gaps = 36/293 (12%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-----SDGAL-VAVKRLKDYNIAGGEVQFQTEVETIS- 353
+N LG G FG V + D L VAVK LK A + +E++ +S
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLR-------DHIHGRPALDWARRKR 406
L H N++ L G C+ L++ Y G + + LR D GRP L+
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP-LELRDLLH 156
Query: 407 IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK-LLDHRDSHVTTA 465
+ A+G+ +L + IHRDV A N+LL A +GDFGLA+ +++ + V
Sbjct: 157 FSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 213
Query: 466 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQR-GVMLDWVKK 524
R V +APE + + ++DV+ +GILL E+ F N G++++
Sbjct: 214 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI--------FSLGLNPYPGILVN---- 261
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
K ++V + + + + C P HRP ++ L+
Sbjct: 262 ----SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 310
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 309 LGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
+GRG FG V+ G +D LVAVK ++ + +F E + H N++RL G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL-----GTARGLLYLHEQC 422
+ + +V + G + LR + AR + L A G+ YL +C
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRT--------EGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHI-----APEY 477
IHRD+ A N L+ E + DFG+++ ++ A G + + APE
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVXAASGGLRQVPVKWTAPEA 286
Query: 478 LSTGQSSEKTDVFGFGILLLELIT 501
L+ G+ S ++DV+ FGILL E +
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS 310
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 137/303 (45%), Gaps = 39/303 (12%)
Query: 291 YTFKELRAATSNFSAK---------NILGRGGFGIVYKGCFS----DGALVAVKRLKDYN 337
+TF++ A F+ + ++G G FG V G VA+K LK
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 338 IAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP 397
F +E + H N++ L G + +++ YM NGS+ + LR + GR
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRF 128
Query: 398 ALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL-- 455
+ + + G G+ YL D +HRD+ A NIL++ + V DFG++++L
Sbjct: 129 TV--IQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
Query: 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQ 514
D ++ T + + APE ++ + + +DV+ +GI++ E+++ G+R + +NQ
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMSNQ 241
Query: 515 RGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLK 574
D +K + + +L +D + + Q+ L C Q RPK +++
Sbjct: 242 -----DVIKAIEEGYRLPPPMDCPIA----------LHQLMLDCWQKERSDRPKFGQIVN 286
Query: 575 MLE 577
ML+
Sbjct: 287 MLD 289
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 8/193 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG+V G + VA+K +K+ +++ E +F E + + H L++L G C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
+ ++ YM NG + + LR+ H + + + YL + + +H
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFLH 134
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD+ A N L+++ V DFGL++ + + + + V PE L + S K+D
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 194
Query: 489 VFGFGILLLELIT 501
++ FG+L+ E+ +
Sbjct: 195 IWAFGVLMWEIYS 207
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 112/243 (46%), Gaps = 37/243 (15%)
Query: 292 TFKELRAATSNFSAKNI-----LGRGGFGIVYKGCF------SDGALVAVKRLKDYNIAG 340
FK L F KN+ LG G FG V K + VAVK LK+ N +
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASP 67
Query: 341 GEVQ-FQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPA- 398
E++ +E + H ++++L G CS + LL+ Y GS+ LR+ P
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 399 -----------LDWARRKRIALG--------TARGLLYLHEQCDPKIIHRDVKAANILLD 439
LD + + +G ++G+ YL E K++HRD+ A NIL+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVA 184
Query: 440 EDFEAVVGDFGLAKLLDHRDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE 498
E + + DFGL++ + DS+V + R V +A E L + ++DV+ FG+LL E
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 499 LIT 501
++T
Sbjct: 245 IVT 247
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 8/193 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG+V G + VA+K +K+ +++ E +F E + + H L++L G C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
+ ++ YM NG + + LR+ H + + + YL + + +H
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFLH 123
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD+ A N L+++ V DFGL++ + + + + V PE L + S K+D
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 183
Query: 489 VFGFGILLLELIT 501
++ FG+L+ E+ +
Sbjct: 184 IWAFGVLMWEIYS 196
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 309 LGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
+GRG FG V+ G +D LVAVK ++ + +F E + H N++RL G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL-----GTARGLLYLHEQC 422
+ + +V + G + LR + AR + L A G+ YL +C
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRT--------EGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHI-----APEY 477
IHRD+ A N L+ E + DFG+++ ++ A G + + APE
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVKWTAPEA 286
Query: 478 LSTGQSSEKTDVFGFGILLLELIT 501
L+ G+ S ++DV+ FGILL E +
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS 310
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 128/302 (42%), Gaps = 36/302 (11%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-----SDGAL-VAVKRLKDYNIAGGEVQFQTEVETIS- 353
+N LG G FG V + D L VAVK LK A + +E++ +S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLR-------DHIHGRPALDWARRKR 406
L H N++ L G C+ L++ Y G + + LR D GRP L+
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP-LELRDLLH 164
Query: 407 IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK-LLDHRDSHVTTA 465
+ A+G+ +L + IHRDV A N+LL A +GDFGLA+ +++ + V
Sbjct: 165 FSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 221
Query: 466 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQR-GVMLDWVKK 524
R V +APE + + ++DV+ +GILL E+ F N G++++
Sbjct: 222 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI--------FSLGLNPYPGILVN---- 269
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLAEK 584
K ++V + + + + C P HRP ++ L+ ++
Sbjct: 270 ----SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 325
Query: 585 WE 586
E
Sbjct: 326 RE 327
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 72 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 124
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 125 EGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 180
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 181 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 237
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 8/193 (4%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG+V G + VA+K +K+ +++ E +F E + + H L++L G C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
+ ++ YM NG + + LR+ H + + + YL + + +H
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD+ A N L+++ V DFGL++ + + + + V PE L + S K+D
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 489 VFGFGILLLELIT 501
++ FG+L+ E+ +
Sbjct: 189 IWAFGVLMWEIYS 201
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 22/261 (8%)
Query: 297 RAATSNFSAKNILGRGGFGIVYK-GCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLA 355
+ + +F LG G FG V+ +G A+K LK + + T E + L+
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 356 V--HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLR-DHIHGRPALDWARRKRIALGTA 412
+ H ++R+ G + ++ Y+ G + S LR P K A
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA-----KFYAAEVC 116
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
L YLH + II+RD+K NILLD++ + DFG AK + VT + GT +
Sbjct: 117 LALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPDY 169
Query: 473 IAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLS 532
IAPE +ST ++ D + FGIL+ E++ G M + K L+ E +
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF------YDSNTMKTYEKILNAELRFP 223
Query: 533 QMVDKDLKGNFDRIELEEMVQ 553
++D+K R+ ++ Q
Sbjct: 224 PFFNEDVKDLLSRLITRDLSQ 244
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 32/291 (10%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEV 349
KE+ A S + ++G G FG V G VA+K LK F +E
Sbjct: 3 KEIDA--SCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 60
Query: 350 ETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ H N++ L G + +++ YM NGS+ + LR + GR + + +
Sbjct: 61 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRFTV--IQLVGMLR 117
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVR 467
G G+ YL D +HRD+ A NIL++ + V DFG++++L D ++ T +
Sbjct: 118 GIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLH 526
+ APE ++ + + +DV+ +GI++ E+++ G+R + +NQ D +K +
Sbjct: 175 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMSNQ-----DVIKAIE 227
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ +L +D + + Q+ L C Q RPK +++ ML+
Sbjct: 228 EGYRLPPPMDCPIA----------LHQLMLDCWQKERSDRPKFGQIVNMLD 268
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 127/270 (47%), Gaps = 33/270 (12%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L++ MP G + +R+H I + L+W + A
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFG AKLL + ++ H + +
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPI 185
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEG 529
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQPP 244
Query: 530 ----------KLSQMVDKDLKGNFDRIELE 549
+ M+D D + F + +E
Sbjct: 245 ICTIDVYMIMRKCWMIDADSRPKFRELIIE 274
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L++ MP G + +R+H I + L+W + A
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 131
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFG AKLL + ++ H + +
Sbjct: 132 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPI 187
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 244
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 37/243 (15%)
Query: 292 TFKELRAATSNFSAKNI-----LGRGGFGIVYKGCF------SDGALVAVKRLKDYNIAG 340
FK L F KN+ LG G FG V K + VAVK LK+ N +
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASP 67
Query: 341 GEVQ-FQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPA- 398
E++ +E + H ++++L G CS + LL+ Y GS+ LR+ P
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 399 -----------LDWARRKRIALG--------TARGLLYLHEQCDPKIIHRDVKAANILLD 439
LD + + +G ++G+ YL E K++HRD+ A NIL+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVA 184
Query: 440 EDFEAVVGDFGLAKLLDHRDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE 498
E + + DFGL++ + DS V + R V +A E L + ++DV+ FG+LL E
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 499 LIT 501
++T
Sbjct: 245 IVT 247
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 116/238 (48%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +L G FG VYKG + +G V A+K L++ + E ++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 183
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 240
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L++ MP G + +R+H I + L+W + A
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFG AKLL + ++ H + +
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPI 185
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 242
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +L G FG VYKG + +G V A+K L++ + E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L++ MP G + +R+H I + L+W + A
Sbjct: 82 DNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 134
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 190
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 247
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 32/291 (10%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEV 349
KE+ A S + ++G G FG V G VA+K LK F +E
Sbjct: 9 KEIDA--SCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 66
Query: 350 ETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ H N++ L G + +++ YM NGS+ + LR + GR + + +
Sbjct: 67 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRFTV--IQLVGMLR 123
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVR 467
G G+ YL D +HRD+ A NIL++ + V DFG++++L D ++ T +
Sbjct: 124 GIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 180
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLH 526
+ APE ++ + + +DV+ +GI++ E+++ G+R + +NQ D +K +
Sbjct: 181 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMSNQ-----DVIKAIE 233
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ +L +D + + Q+ L C Q RPK +++ ML+
Sbjct: 234 EGYRLPPPMDCPIA----------LHQLMLDCWQKERSDRPKFGQIVNMLD 274
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 129/281 (45%), Gaps = 32/281 (11%)
Query: 306 KNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
+ ++G G FG V +G + VA+K LK +F +E + H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ 421
RL G + +++ +M NG++ S LR + + R G A G+ YL E
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEM 135
Query: 422 CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR--DSHVTTAVRGTVG--HIAPEY 477
+HRD+ A NIL++ + V DFGL++ L+ D T+++ G + APE
Sbjct: 136 ---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 478 LSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536
++ + + +D + +GI++ E+++ G+R + +NQ D + + Q+ +L D
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERP--YWDMSNQ-----DVINAIEQDYRLPPPPD 245
Query: 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ Q+ L C Q + RP+ +V+ L+
Sbjct: 246 CPTS----------LHQLMLDCWQKDRNARPRFPQVVSALD 276
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 129/291 (44%), Gaps = 32/291 (10%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEV 349
KEL A S + ++G G FG V G VA+K LK F E
Sbjct: 38 KELDA--SCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEA 95
Query: 350 ETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ H N++ L G + ++V +M NG++ + LR H + R
Sbjct: 96 SIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR--- 152
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVR 467
G A G+ YL D +HRD+ A NIL++ + V DFGL++++ D + TT +
Sbjct: 153 GIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK 209
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLH 526
V APE + + + +DV+ +GI++ E+++ G+R + +NQ D +K +
Sbjct: 210 IPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMSNQ-----DVIKAIE 262
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ +L +D + Q+ L C Q RPK +++ +L+
Sbjct: 263 EGYRLPAPMDCPAG----------LHQLMLDCWQKERAERPKFEQIVGILD 303
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 116/238 (48%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+ L++ + E ++
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 109 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 161
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 162 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 217
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 218 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 274
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 307 NILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLA--VHRNLLRL 363
I RG FG V+K +D V + L+D +Q+E E S H NLL+
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQ------SWQSEREIFSTPGMKHENLLQF 74
Query: 364 CGF----CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+ E E L+ + GS+ L+ +I + W +A +RGL YLH
Sbjct: 75 IAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI-----ITWNELCHVAETMSRGLSYLH 129
Query: 420 EQC--------DPKIIHRDVKAANILLDEDFEAVVGDFGLA-KLLDHRDSHVTTAVRGTV 470
E P I HRD K+ N+LL D AV+ DFGLA + + T GT
Sbjct: 130 EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTR 189
Query: 471 GHIAPEYLSTGQSSE-----KTDVFGFGILLLELITGQRALD 507
++APE L + + + D++ G++L EL++ +A D
Sbjct: 190 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 126/270 (46%), Gaps = 33/270 (12%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFG AKLL + ++ H + +
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPI 185
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEG 529
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQPP 244
Query: 530 ----------KLSQMVDKDLKGNFDRIELE 549
+ M+D D + F + +E
Sbjct: 245 ICTIDVYMIMRKCWMIDADSRPKFRELIIE 274
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 116/238 (48%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFG AKLL + ++ H + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPI 183
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 240
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 133/315 (42%), Gaps = 38/315 (12%)
Query: 279 YDPEVSLGHLKRYTFKELRAAT-SNFSAKNILGRGGFGIVYKGCFS------DGALVAVK 331
Y+P S K + +L+ N + LG G FG VY+G S VAVK
Sbjct: 9 YNPNYSFAG-KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 67
Query: 332 RLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRD 391
L + E+ F E IS H+N++R G R ++ M G + S LR+
Sbjct: 68 TLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 127
Query: 392 HIHGRP----ALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD---EDFEA 444
RP +L +A A G YL E IHRD+ A N LL A
Sbjct: 128 -TRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 183
Query: 445 VVGDFGLAKLLDHRDSHVTT--AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+GDFG+A+ + +R S+ V + PE G + KTD + FG+LL E+ +
Sbjct: 184 KIGDFGMARDI-YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS- 241
Query: 503 QRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFN 562
+ + +NQ +L++V G++ K+ G RI M Q C Q
Sbjct: 242 LGYMPYPSKSNQE--VLEFVTS---GGRMDP--PKNCPGPVYRI----MTQ----CWQHQ 286
Query: 563 PLHRPKMSEVLKMLE 577
P RP + +L+ +E
Sbjct: 287 PEDRPNFAIILERIE 301
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 116/238 (48%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +L G FG VYKG + +G V A+K L++ + E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 134
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPI 190
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 247
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 133/315 (42%), Gaps = 38/315 (12%)
Query: 279 YDPEVSLGHLKRYTFKELRAAT-SNFSAKNILGRGGFGIVYKGCFS------DGALVAVK 331
Y+P S K + +L+ N + LG G FG VY+G S VAVK
Sbjct: 9 YNPNYSFAG-KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 67
Query: 332 RLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRD 391
L + E+ F E IS H+N++R G R ++ M G + S LR+
Sbjct: 68 TLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 127
Query: 392 HIHGRP----ALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD---EDFEA 444
RP +L +A A G YL E IHRD+ A N LL A
Sbjct: 128 -TRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 183
Query: 445 VVGDFGLAKLLDHRDSHVTT--AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+GDFG+A+ + +R S+ V + PE G + KTD + FG+LL E+ +
Sbjct: 184 KIGDFGMARDI-YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS- 241
Query: 503 QRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFN 562
+ + +NQ +L++V G++ K+ G RI M Q C Q
Sbjct: 242 LGYMPYPSKSNQE--VLEFVTS---GGRMDP--PKNCPGPVYRI----MTQ----CWQHQ 286
Query: 563 PLHRPKMSEVLKMLE 577
P RP + +L+ +E
Sbjct: 287 PEDRPNFAIILERIE 301
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 133/315 (42%), Gaps = 38/315 (12%)
Query: 279 YDPEVSLGHLKRYTFKELRAAT-SNFSAKNILGRGGFGIVYKGCFS------DGALVAVK 331
Y+P S K + +L+ N + LG G FG VY+G S VAVK
Sbjct: 15 YNPNYSFAG-KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 73
Query: 332 RLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRD 391
L + E+ F E IS H+N++R G R ++ M G + S LR+
Sbjct: 74 TLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 133
Query: 392 HIHGRP----ALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD---EDFEA 444
RP +L +A A G YL E IHRD+ A N LL A
Sbjct: 134 -TRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 189
Query: 445 VVGDFGLAKLLDHRDSHVTT--AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+GDFG+A+ + +R S+ V + PE G + KTD + FG+LL E+ +
Sbjct: 190 KIGDFGMARDI-YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS- 247
Query: 503 QRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFN 562
+ + +NQ +L++V G++ K+ G RI M Q C Q
Sbjct: 248 LGYMPYPSKSNQE--VLEFVTS---GGRMDP--PKNCPGPVYRI----MTQ----CWQHQ 292
Query: 563 PLHRPKMSEVLKMLE 577
P RP + +L+ +E
Sbjct: 293 PEDRPNFAIILERIE 307
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 120/286 (41%), Gaps = 30/286 (10%)
Query: 298 AATSNFSAKNILGRGGFGIVYK-GCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLA 355
+ ++ +G G +G K SDG ++ K L ++ E Q +EV +
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 356 VHRNLLRLCG--FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
H N++R T +V Y G +AS + R LD R+
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 414 GLLYLHEQCD--PKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVG 471
L H + D ++HRD+K AN+ LD +GDFGLA++L+H S T V GT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPY 181
Query: 472 HIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKL 531
+++PE ++ +EK+D++ G LL EL A +Q+
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT---AFSQK---------------- 222
Query: 532 SQMVDKDLKGNFDRIEL---EEMVQVALLCTQFNPLHRPKMSEVLK 574
++ K +G F RI +E+ ++ HRP + E+L+
Sbjct: 223 -ELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 122/284 (42%), Gaps = 36/284 (12%)
Query: 309 LGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG G FG VY+G S VAVK L + E+ F E IS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP----ALDWARRKRIALGTARGLLYL 418
G R ++ M G + S LR+ RP +L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 419 HEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTT--AVRGTVGHI 473
E IHRD+ A N LL A +GDFG+A+ + +R S+ V +
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWM 227
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533
PE G + KTD + FG+LL E+ + + + +NQ +L++V G++
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS---GGRMDP 281
Query: 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
K+ G RI M Q C Q P RP + +L+ +E
Sbjct: 282 --PKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 315
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 116/238 (48%), Gaps = 23/238 (9%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-SDGALV----AVKRLKDYNIAGGEVQFQTEVETISLA 355
+ F +LG G FG VYKG + +G V A+K L++ + E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTA 412
+ ++ RL G C T +L+ MP G + +R+H I + L+W + A
Sbjct: 82 DNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 134
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
+G+ YL D +++HRD+ A N+L+ + DFG AKLL + ++ H + +
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPI 190
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQ 527
+A E + + ++DV+ +G+ + EL+T G + D G A++ +L+ ++L Q
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQ 247
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 122/284 (42%), Gaps = 36/284 (12%)
Query: 309 LGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG G FG VY+G S VAVK L + E+ F E IS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP----ALDWARRKRIALGTARGLLYL 418
G R ++ M G + S LR+ RP +L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 419 HEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTT--AVRGTVGHI 473
E IHRD+ A N LL A +GDFG+A+ + +R S+ V +
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWM 227
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533
PE G + KTD + FG+LL E+ + + + +NQ +L++V G++
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS---GGRMDP 281
Query: 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
K+ G RI M Q C Q P RP + +L+ +E
Sbjct: 282 --PKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 315
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 120/286 (41%), Gaps = 30/286 (10%)
Query: 298 AATSNFSAKNILGRGGFGIVYK-GCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLA 355
+ ++ +G G +G K SDG ++ K L ++ E Q +EV +
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 356 VHRNLLRLCG--FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
H N++R T +V Y G +AS + R LD R+
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 414 GLLYLHEQCD--PKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVG 471
L H + D ++HRD+K AN+ LD +GDFGLA++L+H D+ A GT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKAFVGTPY 181
Query: 472 HIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKL 531
+++PE ++ +EK+D++ G LL EL A +Q+
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT---AFSQK---------------- 222
Query: 532 SQMVDKDLKGNFDRIEL---EEMVQVALLCTQFNPLHRPKMSEVLK 574
++ K +G F RI +E+ ++ HRP + E+L+
Sbjct: 223 -ELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 122/284 (42%), Gaps = 36/284 (12%)
Query: 309 LGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG G FG VY+G S VAVK L + E+ F E IS H+N++R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP----ALDWARRKRIALGTARGLLYL 418
G R ++ M G + S LR+ RP +L +A A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 419 HEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTT--AVRGTVGHI 473
E IHRD+ A N LL A +GDFG+A+ + +R S+ V +
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWM 212
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533
PE G + KTD + FG+LL E+ + + + +NQ +L++V G++
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS---GGRMDP 266
Query: 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
K+ G RI M Q C Q P RP + +L+ +E
Sbjct: 267 --PKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 300
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 122/284 (42%), Gaps = 36/284 (12%)
Query: 309 LGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG G FG VY+G S VAVK L + E+ F E IS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP----ALDWARRKRIALGTARGLLYL 418
G R ++ M G + S LR+ RP +L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 419 HEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTT--AVRGTVGHI 473
E IHRD+ A N LL A +GDFG+A+ + +R S+ V +
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWM 227
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533
PE G + KTD + FG+LL E+ + + + +NQ +L++V G++
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS---GGRMDP 281
Query: 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
K+ G RI M Q C Q P RP + +L+ +E
Sbjct: 282 --PKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 315
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 133/315 (42%), Gaps = 38/315 (12%)
Query: 279 YDPEVSLGHLKRYTFKELRAAT-SNFSAKNILGRGGFGIVYKGCFS------DGALVAVK 331
Y+P S K + +L+ N + LG G FG VY+G S VAVK
Sbjct: 9 YNPNYSFAG-KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 67
Query: 332 RLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRD 391
L + E+ F E IS H+N++R G R ++ M G + S LR+
Sbjct: 68 TLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 127
Query: 392 HIHGRP----ALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD---EDFEA 444
RP +L +A A G YL E IHRD+ A N LL A
Sbjct: 128 -TRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 183
Query: 445 VVGDFGLAKLLDHRDSHVTT--AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+GDFG+A+ + +R S+ V + PE G + KTD + FG+LL E+ +
Sbjct: 184 KIGDFGMAQDI-YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS- 241
Query: 503 QRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFN 562
+ + +NQ +L++V G++ K+ G RI M Q C Q
Sbjct: 242 LGYMPYPSKSNQE--VLEFVTS---GGRMDP--PKNCPGPVYRI----MTQ----CWQHQ 286
Query: 563 PLHRPKMSEVLKMLE 577
P RP + +L+ +E
Sbjct: 287 PEDRPNFAIILERIE 301
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 13/215 (6%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEV--QFQTEVETIS 353
R ++ + LG G FG V G G VAVK L I +V + + E++ +
Sbjct: 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK 71
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
L H ++++L ST ++ +V Y+ G L D+I LD +R+
Sbjct: 72 LFRHPHIIKLYQVISTPSDIFMVMEYVSGGE----LFDYICKNGRLDEKESRRLFQQILS 127
Query: 414 GLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHI 473
G+ Y H ++HRD+K N+LLD A + DFGL+ ++ D G+ +
Sbjct: 128 GVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRXSCGSPNYA 182
Query: 474 APEYLSTG-QSSEKTDVFGFGILLLELITGQRALD 507
APE +S + + D++ G++L L+ G D
Sbjct: 183 APEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 14/226 (6%)
Query: 302 NFSAKNILGRGGFGIVYKG-CFSDGALVAVKRL-KDYNIAGGEVQ-FQTEVETISLAVHR 358
+F N+LG+G F VY+ G VA+K + K G VQ Q EV+ H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 359 NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYL 418
++L L + N LV NG + L++ + +P + R + G+LYL
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV--KPFSENEARHFMH-QIITGMLYL 128
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEY 477
H I+HRD+ +N+LL + + DFGLA L + H T GT +I+PE
Sbjct: 129 HSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC--GTPNYISPEI 183
Query: 478 LSTGQSSEKTDVFGFGILLLELITGQRALDFGRAAN--QRGVMLDW 521
+ ++DV+ G + L+ G+ D N + V+ D+
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY 229
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 122/284 (42%), Gaps = 36/284 (12%)
Query: 309 LGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG G FG VY+G S VAVK L + E+ F E IS H+N++R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP----ALDWARRKRIALGTARGLLYL 418
G R ++ M G + S LR+ RP +L +A A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 419 HEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTT--AVRGTVGHI 473
E IHRD+ A N LL A +GDFG+A+ + +R S+ V +
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWM 212
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533
PE G + KTD + FG+LL E+ + + + +NQ +L++V G++
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS---GGRMDP 266
Query: 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
K+ G RI M Q C Q P RP + +L+ +E
Sbjct: 267 --PKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 300
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 122/284 (42%), Gaps = 36/284 (12%)
Query: 309 LGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG G FG VY+G S VAVK L + E+ F E IS H+N++R
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP----ALDWARRKRIALGTARGLLYL 418
G R ++ M G + S LR+ RP +L +A A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 419 HEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTT--AVRGTVGHI 473
E IHRD+ A N LL A +GDFG+A+ + +R S+ V +
Sbjct: 149 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWM 204
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533
PE G + KTD + FG+LL E+ + + + +NQ +L++V G++
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS---GGRMDP 258
Query: 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
K+ G RI M Q C Q P RP + +L+ +E
Sbjct: 259 --PKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 292
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 297 RAATSNFSAKNILGRGGFGIVY---KGCFSD-GALVAVKRLKDYNI-AGGEVQFQTEVET 351
+A S+F +LG+G FG V+ K D G L A+K LK + V+ + E +
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 352 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGT 411
++ H +++L TE + L+ ++ G + +RL + K
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAEL 139
Query: 412 ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK-LLDHRDSHVTTAVRGTV 470
A GL +LH II+RD+K NILLDE+ + DFGL+K +DH + GTV
Sbjct: 140 ALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC--GTV 194
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
++APE ++ S D + +G+L+ E++TG
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 122/284 (42%), Gaps = 36/284 (12%)
Query: 309 LGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG G FG VY+G S VAVK L + E+ F E IS H+N++R
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP----ALDWARRKRIALGTARGLLYL 418
G R ++ M G + S LR+ RP +L +A A G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 419 HEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTT--AVRGTVGHI 473
E IHRD+ A N LL A +GDFG+A+ + +R S+ V +
Sbjct: 174 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAMLPVKWM 229
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533
PE G + KTD + FG+LL E+ + + + +NQ +L++V G++
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS---GGRMDP 283
Query: 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
K+ G RI M Q C Q P RP + +L+ +E
Sbjct: 284 --PKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 317
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 91/204 (44%), Gaps = 13/204 (6%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGA-LVAVKRLKDYNIA--GGEVQFQTEVETISLAVHR 358
+F LG+G FG VY +VA+K L I G E Q + E+E + H
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 359 NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYL 418
N+LRL + L+ Y P G + L+ D R I A L+Y
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC----TFDEQRTATIMEELADALMYC 139
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL 478
H + K+IHRD+K N+LL E + DFG + H S + GT+ ++ PE +
Sbjct: 140 HGK---KVIHRDIKPENLLLGLKGELKIADFGWSV---HAPSLRRKTMCGTLDYLPPEMI 193
Query: 479 STGQSSEKTDVFGFGILLLELITG 502
+EK D++ G+L EL+ G
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 309 LGRGGFGIVYKG-CFS-----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG G FG V+ C + D LVAVK LK+ + + + FQ E E +++ H++++R
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ-DFQREAELLTMLQHQHIVR 84
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG------------ 410
G C+ L+V+ YM +G + LR HG A A + +A G
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRS--HGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 411 -TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-VTTAVRG 468
A G++YL +HRD+ N L+ + +GDFG+++ + D + V
Sbjct: 143 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 469 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
+ + PE + + + ++DV+ FG++L E+ T
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 15/226 (6%)
Query: 286 GHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCF----SDGALVAVKRLKDYNIAGG 341
G R +E+ A S + I+G G G V G VA+K LK
Sbjct: 36 GRAGRSFTREIEA--SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ 93
Query: 342 EVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDW 401
F +E + H N++RL G + ++V YM NGS+ + LR H +
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL 153
Query: 402 ARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRD 459
R G G+ YL D +HRD+ A N+L+D + V DFGL+++L D
Sbjct: 154 VGMLR---GVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQR 504
++ TT + + APE ++ S +DV+ FG+++ E++ G+R
Sbjct: 208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 129/281 (45%), Gaps = 32/281 (11%)
Query: 306 KNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
+ ++G G FG V +G + VA+K LK +F +E + H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ 421
RL G + +++ +M NG++ S LR + + R G A G+ YL E
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEM 137
Query: 422 CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR--DSHVTTAVRGTVG--HIAPEY 477
+HRD+ A NIL++ + V DFGL++ L+ D T+++ G + APE
Sbjct: 138 ---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 478 LSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536
++ + + +D + +GI++ E+++ G+R + +NQ D + + Q+ +L D
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMSFGERP--YWDMSNQ-----DVINAIEQDYRLPPPPD 247
Query: 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+ Q+ L C Q + RP+ +V+ L+
Sbjct: 248 CPTS----------LHQLMLDCWQKDRNARPRFPQVVSALD 278
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG VYK + +++A ++ D + E++ ++ H N+++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
EN ++ + G+V + + + RP L ++ + + T L YLH D KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL--ERP-LTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 429 RDVKAANILLDEDFEAVVGDFGLA----KLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
RD+KA NIL D + + DFG++ + + RDS + GT +APE + S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-----GTPYWMAPEVVMCETSK 213
Query: 485 E-----KTDVFGFGILLLEL 499
+ K DV+ GI L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 309 LGRGGFGIVYKG-CFS-----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG G FG V+ C + D LVAVK LK+ + + + FQ E E +++ H++++R
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ-DFQREAELLTMLQHQHIVR 78
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG------------ 410
G C+ L+V+ YM +G + LR HG A A + +A G
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRS--HGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 411 -TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-VTTAVRG 468
A G++YL +HRD+ N L+ + +GDFG+++ + D + V
Sbjct: 137 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 469 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
+ + PE + + + ++DV+ FG++L E+ T
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 133/315 (42%), Gaps = 38/315 (12%)
Query: 279 YDPEVSLGHLKRYTFKELRAAT-SNFSAKNILGRGGFGIVYKGCFS------DGALVAVK 331
Y+P S K + +L+ N + LG G FG VY+G S VAVK
Sbjct: 35 YNPNYSFAG-KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 93
Query: 332 RLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRD 391
L + E+ F E IS H+N++R G R ++ M G + S LR+
Sbjct: 94 TLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 153
Query: 392 HIHGRP----ALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD---EDFEA 444
RP +L +A A G YL E IHRD+ A N LL A
Sbjct: 154 -TRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 209
Query: 445 VVGDFGLAKLLDHRDSHVTT--AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+GDFG+A+ + +R S+ V + PE G + KTD + FG+LL E+ +
Sbjct: 210 KIGDFGMARDI-YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS- 267
Query: 503 QRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFN 562
+ + +NQ +L++V G++ K+ G RI M Q C Q
Sbjct: 268 LGYMPYPSKSNQE--VLEFVTS---GGRMDP--PKNCPGPVYRI----MTQ----CWQHQ 312
Query: 563 PLHRPKMSEVLKMLE 577
P RP + +L+ +E
Sbjct: 313 PEDRPNFAIILERIE 327
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 125/306 (40%), Gaps = 40/306 (13%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-----SDGAL-VAVKRLKDYNIAGGEVQFQTEVETIS- 353
+N LG G FG V + D L VAVK LK A + +E++ +S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALG 410
L H N++ L G C+ L++ Y G + + LR + PA A +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN----STA 161
Query: 411 TARGLLYLHEQ--------CDPKIIHRDVKAANILLDEDFEAVVGDFGLAK-LLDHRDSH 461
+ R LL+ Q IHRDV A N+LL A +GDFGLA+ +++ +
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 462 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQR-GVMLD 520
V R V +APE + + ++DV+ +GILL E+ F N G++++
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI--------FSLGLNPYPGILVN 273
Query: 521 WVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDG 580
K ++V + + + + C P HRP ++ L+
Sbjct: 274 --------SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325
Query: 581 LAEKWE 586
++ E
Sbjct: 326 QEDRRE 331
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG VYK + +++A ++ D + E++ ++ H N+++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
EN ++ + G+V + + + RP L ++ + + T L YLH D KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL--ERP-LTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 429 RDVKAANILLDEDFEAVVGDFGLA----KLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
RD+KA NIL D + + DFG++ + + RDS + GT +APE + S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-----GTPYWMAPEVVMCETSK 213
Query: 485 E-----KTDVFGFGILLLEL 499
+ K DV+ GI L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 37/243 (15%)
Query: 292 TFKELRAATSNFSAKNI-----LGRGGFGIVYKGCF------SDGALVAVKRLKDYNIAG 340
FK L F KN+ LG G FG V K + VAVK LK+ N +
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASP 67
Query: 341 GEVQ-FQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPA- 398
E++ +E + H ++++L G CS + LL+ Y GS+ LR+ P
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 399 -----------LDWARRKRIALG--------TARGLLYLHEQCDPKIIHRDVKAANILLD 439
LD + + +G ++G+ YL E ++HRD+ A NIL+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVA 184
Query: 440 EDFEAVVGDFGLAKLLDHRDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE 498
E + + DFGL++ + DS V + R V +A E L + ++DV+ FG+LL E
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 499 LIT 501
++T
Sbjct: 245 IVT 247
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 38/287 (13%)
Query: 307 NILGRGGFGIVYKGCF--SDGA--LVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLL 361
ILG G FG V +G DG VAVK +K N + E++ F +E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 362 RLCGFCSTENER-----LLVYPYMPNGSV-----ASRLRDHIHGRPALDWARRKRIALGT 411
RL G C + + +++ P+M G + SRL G + + +
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLET---GPKHIPLQTLLKFMVDI 156
Query: 412 ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAV-RGTV 470
A G+ YL + +HRD+ A N +L +D V DFGL+K + D + + + V
Sbjct: 157 ALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPV 213
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530
IA E L+ + K+DV+ FG+ + E+ T R + Q M D++ H +
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIAT--RGMT-PYPGVQNHEMYDYLLHGH---R 267
Query: 531 LSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
L Q D L+E+ ++ C + +PL RP S + LE
Sbjct: 268 LKQPEDC----------LDELYEIMYSCWRTDPLDRPTFSVLRLQLE 304
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 29/219 (13%)
Query: 308 ILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL--AVHRNLLRLCG 365
+ RG FG V+K + VAVK + + +Q E E SL H N+L+ G
Sbjct: 31 VKARGRFGCVWKAQLLN-EYVAVKIFPIQD----KQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 366 F----CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ 421
S + + L+ + GS++ L+ ++ + W IA ARGL YLHE
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKANV-----VSWNELCHIAETMARGLAYLHED 140
Query: 422 C-------DPKIIHRDVKAANILLDEDFEAVVGDFGLA-KLLDHRDSHVTTAVRGTVGHI 473
P I HRD+K+ N+LL + A + DFGLA K + + T GT ++
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 474 APEYLSTGQSSE-----KTDVFGFGILLLELITGQRALD 507
APE L + + + D++ G++L EL + A D
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 117/277 (42%), Gaps = 35/277 (12%)
Query: 303 FSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
F+ +G+G FG V+KG + +VA+K + Q E+ +S +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ 421
+ G + + ++ Y+ GS L LD + I +GL YLH +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 143
Query: 422 CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG 481
K IHRD+KAAN+LL E E + DFG+A L T V GT +APE +
Sbjct: 144 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQS 199
Query: 482 QSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKD--- 538
K D++ GI +EL G+ +LH K+ ++ K+
Sbjct: 200 AYDSKADIWSLGITAIELARGEPPHS----------------ELHPM-KVLFLIPKNNPP 242
Query: 539 -LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLK 574
L+GN+ + L+E V+ C P RP E+LK
Sbjct: 243 TLEGNYSK-PLKEFVEA---CLNKEPSFRPTAKELLK 275
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 117/277 (42%), Gaps = 35/277 (12%)
Query: 303 FSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
F+ +G+G FG V+KG + +VA+K + Q E+ +S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ 421
+ G + + ++ Y+ GS L LD + I +GL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 123
Query: 422 CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG 481
K IHRD+KAAN+LL E E + DFG+A L T V GT +APE +
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQS 179
Query: 482 QSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKD--- 538
K D++ GI +EL G+ +LH K+ ++ K+
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHS----------------ELHP-MKVLFLIPKNNPP 222
Query: 539 -LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLK 574
L+GN+ + L+E V+ C P RP E+LK
Sbjct: 223 TLEGNYSK-PLKEFVEA---CLNKEPSFRPTAKELLK 255
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 15/226 (6%)
Query: 286 GHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCF----SDGALVAVKRLKDYNIAGG 341
G R +E+ A S + I+G G G V G VA+K LK
Sbjct: 36 GRAGRSFTREIEA--SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ 93
Query: 342 EVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDW 401
F +E + H N++RL G + ++V YM NGS+ + LR H +
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL 153
Query: 402 ARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRD 459
R G G+ YL D +HRD+ A N+L+D + V DFGL+++L D
Sbjct: 154 VGMLR---GVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQR 504
+ TT + + APE ++ S +DV+ FG+++ E++ G+R
Sbjct: 208 AXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 126/305 (41%), Gaps = 38/305 (12%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-----SDGAL-VAVKRLKDYNIAGGEVQFQTEVETIS- 353
+N LG G FG V + D L VAVK LK A + +E++ +S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRK----- 405
L H N++ L G C+ L++ Y G + + LR + PA A
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 406 --RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK-LLDHRDSHV 462
+ A+G+ +L + IHRDV A N+LL A +GDFGLA+ +++ + V
Sbjct: 166 LLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQR-GVMLDW 521
R V +APE + + ++DV+ +GILL E+ F N G++++
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI--------FSLGLNPYPGILVN- 273
Query: 522 VKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGL 581
K ++V + + + + C P HRP ++ L+
Sbjct: 274 -------SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326
Query: 582 AEKWE 586
++ E
Sbjct: 327 EDRRE 331
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 120/288 (41%), Gaps = 44/288 (15%)
Query: 309 LGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG G FG VY+G S VAVK L + E+ F E IS H+N++R
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP----ALDWARRKRIALGTARGLLYL 418
G R ++ M G + S LR+ RP +L +A A G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 419 HEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTTAVRG------T 469
E IHRD+ A N LL A +GDFG+A RD + R
Sbjct: 198 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-----RDIYRAGYYRKGGCAMLP 249
Query: 470 VGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEG 529
V + PE G + KTD + FG+LL E+ + + + +NQ +L++V G
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS---GG 303
Query: 530 KLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
++ K+ G RI M Q C Q P RP + +L+ +E
Sbjct: 304 RMDP--PKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 341
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 309 LGRGGFGIVYKGCFSDGAL---VAVK------RLKDYNIAGGEVQFQTEVETISLAVHRN 359
LG GG VY D L VA+K R K+ + +F+ EV S H+N
Sbjct: 19 LGGGGMSTVY--LAEDTILNIKVAIKAIFIPPREKEETLK----RFEREVHNSSQLSHQN 72
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
++ + ++ LV Y+ +++ + H G ++D A G+ + H
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH--GPLSVDTAIN--FTNQILDGIKHAH 128
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
D +I+HRD+K NIL+D + + DFG+AK L T V GTV + +PE
Sbjct: 129 ---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK 185
Query: 480 TGQSSEKTDVFGFGILLLELITGQ 503
+ E TD++ GI+L E++ G+
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 120/288 (41%), Gaps = 44/288 (15%)
Query: 309 LGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG G FG VY+G S VAVK L + E+ F E IS H+N++R
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP----ALDWARRKRIALGTARGLLYL 418
G R ++ M G + S LR+ RP +L +A A G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRE-TRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 419 HEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTTAVRG------T 469
E IHRD+ A N LL A +GDFG+A RD + R
Sbjct: 175 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-----RDIYRAGYYRKGGCAMLP 226
Query: 470 VGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEG 529
V + PE G + KTD + FG+LL E+ + + + +NQ +L++V G
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS---GG 280
Query: 530 KLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
++ K+ G RI M Q C Q P RP + +L+ +E
Sbjct: 281 RMDP--PKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILERIE 318
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 30/286 (10%)
Query: 298 AATSNFSAKNILGRGGFGIVYK-GCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLA 355
+ ++ +G G +G K SDG ++ K L ++ E Q +EV +
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 356 VHRNLLRLCG--FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
H N++R T +V Y G +AS + R LD R+
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 414 GLLYLHEQCD--PKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVG 471
L H + D ++HRD+K AN+ LD +GDFGLA++L+H D GT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DEDFAKEFVGTPY 181
Query: 472 HIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKL 531
+++PE ++ +EK+D++ G LL EL A +Q+
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT---AFSQK---------------- 222
Query: 532 SQMVDKDLKGNFDRIEL---EEMVQVALLCTQFNPLHRPKMSEVLK 574
++ K +G F RI +E+ ++ HRP + E+L+
Sbjct: 223 -ELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 125/306 (40%), Gaps = 49/306 (16%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-----SDGAL-VAVKRLKDYNIAGGEVQFQTEVETIS- 353
+N LG G FG V + D L VAVK LK A + +E++ +S
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLR--------------------DHI 393
L H N++ L G C+ L++ Y G + + LR D
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 394 HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453
GRP L+ + A+G+ +L + IHRDV A N+LL A +GDFGLA+
Sbjct: 151 DGRP-LELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLAR 206
Query: 454 -LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAA 512
+++ + V R V +APE + + ++DV+ +GILL E+ F
Sbjct: 207 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI--------FSLGL 258
Query: 513 NQR-GVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSE 571
N G++++ K ++V + + + + C P HRP +
Sbjct: 259 NPYPGILVN--------SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQ 310
Query: 572 VLKMLE 577
+ L+
Sbjct: 311 ICSFLQ 316
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG VYK + +++A ++ D + E++ ++ H N+++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
EN ++ + G+V + + + RP L ++ + + T L YLH D KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL--ERP-LTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 429 RDVKAANILLDEDFEAVVGDFGLA----KLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
RD+KA NIL D + + DFG++ + + RD + GT +APE + S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-----GTPYWMAPEVVMCETSK 213
Query: 485 E-----KTDVFGFGILLLEL 499
+ K DV+ GI L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LG G FG V+ ++ VAVK +K +++ F E + H L++L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE--AFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIH 428
E ++ +M GS+ L+ + L + + A G+ ++ ++ IH
Sbjct: 248 KE-PIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIH 301
Query: 429 RDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 488
RD++AANIL+ + DFGLA++ + + APE ++ G + K+D
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFTIKSD 351
Query: 489 VFGFGILLLELITGQR 504
V+ FGILL+E++T R
Sbjct: 352 VWSFGILLMEIVTYGR 367
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 308 ILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR--LCG 365
LG+GGF ++ +D V ++ ++ Q E ++ +++HR+L + G
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 81
Query: 366 FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK 425
F + V+ + S L H R AL + G YLH +
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELH-KRRKALTEPEARYYLRQIVLGCQYLHRN---R 137
Query: 426 IIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSE 485
+IHRD+K N+ L+ED E +GDFGLA +++ D + GT +IAPE LS S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 486 KTDVFGFGILLLELITGQRALD 507
+ DV+ G ++ L+ G+ +
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 308 ILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR--LCG 365
LG+GGF ++ +D V ++ ++ Q E ++ +++HR+L + G
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 81
Query: 366 FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK 425
F + V+ + S L H R AL + G YLH +
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELH-KRRKALTEPEARYYLRQIVLGCQYLHRN---R 137
Query: 426 IIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSE 485
+IHRD+K N+ L+ED E +GDFGLA +++ D + GT +IAPE LS S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 486 KTDVFGFGILLLELITGQRALD 507
+ DV+ G ++ L+ G+ +
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 297 RAATSNFSAKNILGRGGFGIVY---KGCFSDG-ALVAVKRLKDYNI-AGGEVQFQTEVET 351
+A S F +LG+G FG V+ K SD L A+K LK + V+ + E +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 352 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGT 411
+ H +++L TE + L+ ++ G + +RL + + +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-------MFTEEDVKFYL 132
Query: 412 ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK-LLDHRDSHVTTAVRGTV 470
A L L II+RD+K NILLDE+ + DFGL+K +DH + GTV
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTV 190
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
++APE ++ ++ D + FG+L+ E++TG
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 23/276 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKG-CFSDGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVH 357
+NF + +GRG F VY+ C DG VA+K+++ +++ A E++ + H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 358 RNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK-RIALGTARGLL 416
N+++ +NE +V G + SR+ H + L R + + L
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTVWKYFVQLCSALE 150
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
++H + +++HRD+K AN+ + +GD GL + + + + V GT +++PE
Sbjct: 151 HMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPE 206
Query: 477 YLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536
+ + K+D++ G LL E+ Q +G N + KK+ Q D
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAALQSPF-YGDKMN----LYSLCKKIEQCDYPPLPSD 261
Query: 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEV 572
EE+ Q+ +C +P RP ++ V
Sbjct: 262 H---------YSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 308 ILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR--LCG 365
LG+GGF ++ +D V ++ ++ Q E ++ +++HR+L + G
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 103
Query: 366 FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK 425
F + V+ + S L H R AL + G YLH +
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLELH-KRRKALTEPEARYYLRQIVLGCQYLHRN---R 159
Query: 426 IIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSE 485
+IHRD+K N+ L+ED E +GDFGLA +++ D + GT +IAPE LS S
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 486 KTDVFGFGILLLELITGQRALD 507
+ DV+ G ++ L+ G+ +
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 308 ILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR--LCG 365
LG+GGF ++ +D V ++ ++ Q E ++ +++HR+L + G
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 85
Query: 366 FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK 425
F + V+ + S L H R AL + G YLH +
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLELH-KRRKALTEPEARYYLRQIVLGCQYLHRN---R 141
Query: 426 IIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSE 485
+IHRD+K N+ L+ED E +GDFGLA +++ D + GT +IAPE LS S
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 486 KTDVFGFGILLLELITGQRALD 507
+ DV+ G ++ L+ G+ +
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPFE 222
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 308 ILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR--LCG 365
LG+GGF ++ +D V ++ ++ Q E ++ +++HR+L + G
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 105
Query: 366 FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK 425
F + V+ + S L H R AL + G YLH +
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLELH-KRRKALTEPEARYYLRQIVLGCQYLHRN---R 161
Query: 426 IIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSE 485
+IHRD+K N+ L+ED E +GDFGLA +++ D + GT +IAPE LS S
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 486 KTDVFGFGILLLELITGQRALD 507
+ DV+ G ++ L+ G+ +
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPFE 242
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 307 NILGRGGFGIVYKGCF-SDGA----LVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
+LG G FG VYKG + DG VA+K L++ + E ++ +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTARGLLYL 418
RL G C T +L V MP G + +R++ + + L+W + A+G+ YL
Sbjct: 83 RLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWC------MQIAKGMSYL 135
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAPEY 477
D +++HRD+ A N+L+ + DFGLA+LLD ++ + + +A E
Sbjct: 136 E---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 478 LSTGQSSEKTDVFGFGILLLELIT 501
+ + + ++DV+ +G+ + EL+T
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 303 FSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
F+ +G+G FG V+KG + +VA+K + Q E+ +S +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ 421
+ G + + ++ Y+ GS L LD + I +GL YLH +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 138
Query: 422 CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVT-TAVRGTVGHIAPEYLST 480
K IHRD+KAAN+LL E E + DFG+A L D+ + GT +APE +
Sbjct: 139 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 481 GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKD-- 538
K D++ GI +EL G+ +LH K+ ++ K+
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHS----------------ELHP-MKVLFLIPKNNP 236
Query: 539 --LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLK 574
L+GN+ + L+E V+ C P RP E+LK
Sbjct: 237 PTLEGNYSK-PLKEFVEA---CLNKEPSFRPTAKELLK 270
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 297 RAATSNFSAKNILGRGGFGIVY---KGCFSDG-ALVAVKRLKDYNI-AGGEVQFQTEVET 351
+A S F +LG+G FG V+ K SD L A+K LK + V+ + E +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 352 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGT 411
+ H +++L TE + L+ ++ G + +RL + + +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-------MFTEEDVKFYL 132
Query: 412 ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK-LLDHRDSHVTTAVRGTV 470
A L L II+RD+K NILLDE+ + DFGL+K +DH + GTV
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTV 190
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
++APE ++ ++ D + FG+L+ E++TG
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 9/198 (4%)
Query: 308 ILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR--LCG 365
LG+GGF ++ +D V ++ ++ Q E ++ +++HR+L + G
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 79
Query: 366 FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK 425
F + V+ + S L H R AL + G YLH +
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLELH-KRRKALTEPEARYYLRQIVLGCQYLHRN---R 135
Query: 426 IIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSE 485
+IHRD+K N+ L+ED E +GDFGLA +++ D + GT +IAPE LS S
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 486 KTDVFGFGILLLELITGQ 503
+ DV+ G ++ L+ G+
Sbjct: 195 EVDVWSIGCIMYTLLVGK 212
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 297 RAATSNFSAKNILGRGGFGIVY---KGCFSDG-ALVAVKRLKDYNI-AGGEVQFQTEVET 351
+A S F +LG+G FG V+ K SD L A+K LK + V+ + E +
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 80
Query: 352 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGT 411
+ H +++L TE + L+ ++ G + +RL + + +
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-------MFTEEDVKFYL 133
Query: 412 ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK-LLDHRDSHVTTAVRGTV 470
A L L II+RD+K NILLDE+ + DFGL+K +DH + GTV
Sbjct: 134 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTV 191
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
++APE ++ ++ D + FG+L+ E++TG
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 303 FSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
F+ +G+G FG V+KG + +VA+K + Q E+ +S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ 421
+ G + + ++ Y+ GS L LD + I +GL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 123
Query: 422 CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVT-TAVRGTVGHIAPEYLST 480
K IHRD+KAAN+LL E E + DFG+A L D+ + GT +APE +
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 481 GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKD-- 538
K D++ GI +EL G+ +LH K+ ++ K+
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHS----------------ELHP-MKVLFLIPKNNP 221
Query: 539 --LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLK 574
L+GN+ + L+E V+ C P RP E+LK
Sbjct: 222 PTLEGNYSK-PLKEFVEA---CLNKEPSFRPTAKELLK 255
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 127/309 (41%), Gaps = 44/309 (14%)
Query: 301 SNFSAKNILGRGGFGIVYKGCF-----SDGAL-VAVKRLKDYNIAGGEVQFQTEVETIS- 353
+N LG G FG V + D L VAVK LK A + +E++ +S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK-------- 405
L H N++ L G C+ L++ Y G + + LR P L+++
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK--RPPGLEYSYNPSHNPEEQL 163
Query: 406 ------RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK-LLDHR 458
+ A+G+ +L + IHRDV A N+LL A +GDFGLA+ +++
Sbjct: 164 SSRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 220
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQR-GV 517
+ V R V +APE + + ++DV+ +GILL E+ F N G+
Sbjct: 221 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI--------FSLGLNPYPGI 272
Query: 518 MLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
+++ K ++V + + + + C P HRP ++ L+
Sbjct: 273 LVN--------SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 324
Query: 578 GDGLAEKWE 586
++ E
Sbjct: 325 EQAQEDRRE 333
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 118/276 (42%), Gaps = 41/276 (14%)
Query: 309 LGRGGFG--IVYKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCG 365
+G G FG I+ K DG +K + ++ E + + EV ++ H N+++
Sbjct: 32 IGEGSFGKAILVKST-EDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 366 FCSTENERLLVYPYMPNGSVASRLRDH----IHGRPALDWARRKRIALGTARGLLYLHEQ 421
+V Y G + R+ LDW + +AL ++H
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK------HVH-- 142
Query: 422 CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG 481
D KI+HRD+K+ NI L +D +GDFG+A++L+ + A GT +++PE
Sbjct: 143 -DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS-TVELARACIGTPYYLSPEICENK 200
Query: 482 QSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKG 541
+ K+D++ G +L EL T + A + G N +V K + G
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFEAGSMKN--------------------LVLKIISG 240
Query: 542 NFDRIELEEMVQVALLCTQF---NPLHRPKMSEVLK 574
+F + L + L +Q NP RP ++ +L+
Sbjct: 241 SFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 296 LRAATSNFSAKNILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETIS 353
LR F ++G G +G VYKG G L A+K + ++ G E + + E+ +
Sbjct: 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM---DVTGDEEEEIKQEINMLK 75
Query: 354 -LAVHRNLLRLCGFCSTEN------ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKR 406
+ HRN+ G +N + LV + GSV +++ +W
Sbjct: 76 KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AY 133
Query: 407 IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAV 466
I RGL +LH+ K+IHRD+K N+LL E+ E + DFG++ LD T +
Sbjct: 134 ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI 190
Query: 467 RGTVGHIAPEYLSTGQSSE-----KTDVFGFGILLLELITG 502
GT +APE ++ ++ + K+D++ GI +E+ G
Sbjct: 191 -GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 14/214 (6%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQ--FQTEVETISL 354
A N+ LG G FG V + G VA+K + +A ++Q + E+ + L
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 60
Query: 355 AVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
H ++++L +++E ++V Y N L D+I R + +R
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGN-----ELFDYIVQRDKMSEQEARRFFQQIISA 115
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
+ Y H KI+HRD+K N+LLDE + DFGL+ ++ D + G+ + A
Sbjct: 116 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAA 170
Query: 475 PEYLSTG-QSSEKTDVFGFGILLLELITGQRALD 507
PE +S + + DV+ G++L ++ + D
Sbjct: 171 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 14/214 (6%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQ--FQTEVETISL 354
A N+ LG G FG V + G VA+K + +A ++Q + E+ + L
Sbjct: 11 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 70
Query: 355 AVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
H ++++L +++E ++V Y N L D+I R + +R
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGN-----ELFDYIVQRDKMSEQEARRFFQQIISA 125
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
+ Y H KI+HRD+K N+LLDE + DFGL+ ++ D + G+ + A
Sbjct: 126 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAA 180
Query: 475 PEYLSTG-QSSEKTDVFGFGILLLELITGQRALD 507
PE +S + + DV+ G++L ++ + D
Sbjct: 181 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 14/214 (6%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQ--FQTEVETISL 354
A N+ LG G FG V + G VA+K + +A ++Q + E+ + L
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 64
Query: 355 AVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
H ++++L +++E ++V Y N L D+I R + +R
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGN-----ELFDYIVQRDKMSEQEARRFFQQIISA 119
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
+ Y H KI+HRD+K N+LLDE + DFGL+ ++ D + G+ + A
Sbjct: 120 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAA 174
Query: 475 PEYLSTG-QSSEKTDVFGFGILLLELITGQRALD 507
PE +S + + DV+ G++L ++ + D
Sbjct: 175 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 14/214 (6%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQ--FQTEVETISL 354
A N+ LG G FG V + G VA+K + +A ++Q + E+ + L
Sbjct: 10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 69
Query: 355 AVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
H ++++L +++E ++V Y N L D+I R + +R
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGN-----ELFDYIVQRDKMSEQEARRFFQQIISA 124
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
+ Y H KI+HRD+K N+LLDE + DFGL+ ++ D + G+ + A
Sbjct: 125 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAA 179
Query: 475 PEYLSTG-QSSEKTDVFGFGILLLELITGQRALD 507
PE +S + + DV+ G++L ++ + D
Sbjct: 180 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 13/223 (5%)
Query: 284 SLGHLKRYTFKELRAATSN-FSAKNILGRGGFGIVYKGCFSDGA-LVAVKRLKDYNIAGG 341
S+ HL+ + + R F+ + +G+G FG VYKG + +VA+K +
Sbjct: 1 SMAHLRGFANQHSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDE 60
Query: 342 EVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDW 401
Q E+ +S + R G + ++ Y+ GS L+ L+
Sbjct: 61 IEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG-----PLEE 115
Query: 402 ARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH 461
I +GL YLH + + IHRD+KAAN+LL E + + DFG+A L D+
Sbjct: 116 TYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQ 170
Query: 462 VT-TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
+ GT +APE + K D++ GI +EL G+
Sbjct: 171 IKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 40/228 (17%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL 360
+F ++G GGFG V+K DG ++R+K YN E EV+ ++ H N+
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVK-YNNEKAE----REVKALAKLDHVNI 67
Query: 361 LRLCGFC--------STENERLLVYPYMP-NGSVASR-------LRDHIHGRPALD-WAR 403
+ G C T ++ L Y P N +SR ++ + L+ W
Sbjct: 68 VHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 404 RKR-------IAL----GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452
++R +AL +G+ Y+H + K+IHRD+K +NI L + + +GDFGL
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 453 KLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
L ++ T +GT+ +++PE +S+ ++ D++ G++L EL+
Sbjct: 184 TSL--KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 40/291 (13%)
Query: 309 LGRGGFGIV-----YKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETIS-LAVHRNLL 361
LG G FG V Y SD A+ VAVK LK +E++ +S L H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 362 RLCGFCSTENERLLVYPYMPNGSVAS---RLRDHI---HGRPAL--------DWARRKRI 407
L G C+ L++ Y G + + R RD PA+ D
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-V 466
+ A+G+ +L + IHRD+ A NILL + DFGLA+ + + ++V
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 467 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLH 526
R V +APE + + ++DV+ +GI L EL + G ++ G+ +D
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------LG-SSPYPGMPVD------ 277
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
K +M+ + + EM + C +PL RP ++++++E
Sbjct: 278 --SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 10/202 (4%)
Query: 303 FSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
F+ +G+G FG V+KG + +VA+K + Q E+ +S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ 421
+ G ++ ++ Y+ GS LR D + + +GL YLH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLR-----AGPFDEFQIATMLKEILKGLDYLHSE 139
Query: 422 CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG 481
K IHRD+KAAN+LL E + + DFG+A L T V GT +APE +
Sbjct: 140 ---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQS 195
Query: 482 QSSEKTDVFGFGILLLELITGQ 503
K D++ GI +EL G+
Sbjct: 196 AYDSKADIWSLGITAIELAKGE 217
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 71
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 72 --HCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 129 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC- 184
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 185 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 40/291 (13%)
Query: 309 LGRGGFGIV-----YKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETIS-LAVHRNLL 361
LG G FG V Y SD A+ VAVK LK +E++ +S L H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 362 RLCGFCSTENERLLVYPYMPNGSVAS---RLRDHI---HGRPAL--------DWARRKRI 407
L G C+ L++ Y G + + R RD PA+ D
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-V 466
+ A+G+ +L + IHRD+ A NILL + DFGLA+ + + ++V
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 467 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLH 526
R V +APE + + ++DV+ +GI L EL + G ++ G+ +D
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------LG-SSPYPGMPVD------ 277
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
K +M+ + + EM + C +PL RP ++++++E
Sbjct: 278 --SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 71
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 72 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 129 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC- 184
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 185 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 307 NILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL--LRLC 364
LG+GGF Y+ D V ++ ++ Q E + +A+H++L +
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLK--PHQKEKMSTEIAIHKSLDNPHVV 105
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
GF + VY + S L H R A+ + T +G+ YLH
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLELH-KRRKAVTEPEARYFMRQTIQGVQYLHNN--- 161
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
++IHRD+K N+ L++D + +GDFGLA ++ D + GT +IAPE L S
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKTLCGTPNYIAPEVLCKKGHS 220
Query: 485 EKTDVFGFGILLLELITGQ 503
+ D++ G +L L+ G+
Sbjct: 221 FEVDIWSLGCILYTLLVGK 239
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 35 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 90
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 91 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 147
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 148 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC- 203
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 204 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 71
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 72 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 129 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC- 184
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 185 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 308 ILGR-GGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
I+G G FG VYK + +++A ++ D + E++ ++ H N+++L
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
EN ++ + G+V + + + RP L ++ + + T L YLH D KI
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLEL--ERP-LTESQIQVVCKQTLDALNYLH---DNKI 129
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLA-----KLLDHRDSHVTTAVRGTVGHIAPEYLSTG 481
IHRD+KA NIL D + + DFG++ + RDS + GT +APE +
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI-----GTPYWMAPEVVMCE 184
Query: 482 QSSE-----KTDVFGFGILLLEL 499
S + K DV+ GI L+E+
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEM 207
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 301 SNFSAKNILGRGGFGIVYKGC--FSDGALVAVKRL--KDYNIAGGEVQFQTEVETISLAV 356
++FS I+GRGGFG VY GC G + A+K L K + GE E +SL
Sbjct: 189 NDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 357 HRNLLRLCGFC-------STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ C F T ++ + M G + L H A + A
Sbjct: 248 TGD----CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH----GVFSEADMRFYAA 299
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT 469
GL ++H + +++RD+K ANILLDE + D GLA + H + GT
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 353
Query: 470 VGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
G++APE L G + + + D F G +L +L+ G
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 301 SNFSAKNILGRGGFGIVYKGC--FSDGALVAVKRL--KDYNIAGGEVQFQTEVETISLAV 356
++FS I+GRGGFG VY GC G + A+K L K + GE E +SL
Sbjct: 189 NDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 357 HRNLLRLCGFC-------STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ C F T ++ + M G + L H A + A
Sbjct: 248 TGD----CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH----GVFSEADMRFYAA 299
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT 469
GL ++H + +++RD+K ANILLDE + D GLA + H + GT
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 353
Query: 470 VGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
G++APE L G + + + D F G +L +L+ G
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 28 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 83
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 84 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 140
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 141 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC- 196
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 197 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 17 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 72
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 73 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 129
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 130 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC- 185
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 186 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 24 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 79
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 80 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 136
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 137 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC- 192
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 193 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 301 SNFSAKNILGRGGFGIVYKGC--FSDGALVAVKRL--KDYNIAGGEVQFQTEVETISLAV 356
++FS I+GRGGFG VY GC G + A+K L K + GE E +SL
Sbjct: 189 NDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 357 HRNLLRLCGFC-------STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ C F T ++ + M G + L H A + A
Sbjct: 248 TGD----CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH----GVFSEADMRFYAA 299
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT 469
GL ++H + +++RD+K ANILLDE + D GLA + H + GT
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 353
Query: 470 VGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
G++APE L G + + + D F G +L +L+ G
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 20 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 75
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 76 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 132
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 133 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC- 188
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 189 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEV--QFQTEVETIS 353
R ++ + LG G FG V G G VAVK L I +V + + E++ +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHI--HGRPALDWARRKRIALGT 411
L H ++++L ST + +V Y+ G L D+I HGR ARR + +
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGE----LFDYICKHGRVEEMEARRLFQQILS 122
Query: 412 ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVG 471
A + H ++HRD+K N+LLD A + DFGL+ ++ D G+
Sbjct: 123 AVDYCHRH-----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRTSCGSPN 175
Query: 472 HIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALD 507
+ APE +S + + D++ G++L L+ G D
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 307 NILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL--LRLC 364
LG+GGF Y+ D V ++ ++ Q E + +A+H++L +
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLK--PHQKEKMSTEIAIHKSLDNPHVV 105
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
GF + VY + S L H R A+ + T +G+ YLH
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLELH-KRRKAVTEPEARYFMRQTIQGVQYLHNN--- 161
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
++IHRD+K N+ L++D + +GDFGLA ++ D + GT +IAPE L S
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKXLCGTPNYIAPEVLCKKGHS 220
Query: 485 EKTDVFGFGILLLELITGQ 503
+ D++ G +L L+ G+
Sbjct: 221 FEVDIWSLGCILYTLLVGK 239
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 13/222 (5%)
Query: 285 LGHLKRYTFKELRAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAGGEV 343
LG ++ +K+ + +++LG G F ++ LVA+K + + G E
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 344 QFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWAR 403
+ E+ + H N++ L + L+ + G L D I +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG----ELFDRIVEKGFYTERD 117
Query: 404 RKRIALGTARGLLYLHEQCDPKIIHRDVKAANIL---LDEDFEAVVGDFGLAKLLDHRDS 460
R+ + YLH D I+HRD+K N+L LDED + ++ DFGL+K+ D
Sbjct: 118 ASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--PG 172
Query: 461 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
V + GT G++APE L+ S+ D + G++ L+ G
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 301 SNFSAKNILGRGGFGIVYKGC--FSDGALVAVKRL--KDYNIAGGEVQFQTEVETISLAV 356
++FS I+GRGGFG VY GC G + A+K L K + GE E +SL
Sbjct: 188 NDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
Query: 357 HRNLLRLCGFC-------STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ C F T ++ + M G + L H A + A
Sbjct: 247 TGD----CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH----GVFSEADMRFYAA 298
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT 469
GL ++H + +++RD+K ANILLDE + D GLA + H + GT
Sbjct: 299 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 352
Query: 470 VGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
G++APE L G + + + D F G +L +L+ G
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 387
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 40/291 (13%)
Query: 309 LGRGGFGIV-----YKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETIS-LAVHRNLL 361
LG G FG V Y SD A+ VAVK LK +E++ +S L H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 362 RLCGFCSTENERLLVYPYMPNGSVAS---RLRDHI---HGRPAL--------DWARRKRI 407
L G C+ L++ Y G + + R RD PA+ D
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-V 466
+ A+G+ +L + IHRD+ A NILL + DFGLA+ + + ++V
Sbjct: 167 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 467 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLH 526
R V +APE + + ++DV+ +GI L EL + G ++ G+ +D
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------LG-SSPYPGMPVD------ 270
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
K +M+ + + EM + C +PL RP ++++++E
Sbjct: 271 --SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 40/291 (13%)
Query: 309 LGRGGFGIV-----YKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETIS-LAVHRNLL 361
LG G FG V Y SD A+ VAVK LK +E++ +S L H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 362 RLCGFCSTENERLLVYPYMPNGSVAS---RLRDHI---HGRPAL--------DWARRKRI 407
L G C+ L++ Y G + + R RD PA+ D
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-V 466
+ A+G+ +L + IHRD+ A NILL + DFGLA+ + + ++V
Sbjct: 169 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 467 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLH 526
R V +APE + + ++DV+ +GI L EL + G ++ G+ +D
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------LG-SSPYPGMPVD------ 272
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
K +M+ + + EM + C +PL RP ++++++E
Sbjct: 273 --SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 17/224 (7%)
Query: 285 LGHLKRYTFKELRAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAGGEV 343
LG ++ +K+ + +++LG G F ++ LVA+K + + G E
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 344 QFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRL--RDHIHGRPALDW 401
+ E+ + H N++ L + L+ + G + R+ + R A
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA--- 118
Query: 402 ARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANIL---LDEDFEAVVGDFGLAKLLDHR 458
R+ + YLH D I+HRD+K N+L LDED + ++ DFGL+K+ D
Sbjct: 119 ---SRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-- 170
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
V + GT G++APE L+ S+ D + G++ L+ G
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 141/294 (47%), Gaps = 56/294 (19%)
Query: 302 NFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL--KDYNIAGGEVQFQTEVETISLAVHR 358
+F K++LG G G IVY+G F D VAVKR+ + ++ A EVQ E + H
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLRESDE-----HP 78
Query: 359 NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWAR--RKRIAL--GTARG 414
N++R FC TE +R + Y+ A+ L++++ + D+A + I L T G
Sbjct: 79 NVIRY--FC-TEKDR--QFQYIAIELCAATLQEYVEQK---DFAHLGLEPITLLQQTTSG 130
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDE-----DFEAVVGDFGLAKLL---DHRDSHVTTAV 466
L +LH I+HRD+K NIL+ +A++ DFGL K L H S + V
Sbjct: 131 LAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR-RSGV 186
Query: 467 RGTVGHIAPEYLSTGQSSEKT---DVFGFGILLLELITGQRALDFGRAANQRGVML---D 520
GT G IAPE LS T D+F G + +I+ + + FG++ ++ +L
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS-EGSHPFGKSLQRQANILLGAC 245
Query: 521 WVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLK 574
+ LH E K ++ ++L +E+M+ + +P RP VLK
Sbjct: 246 SLDCLHPE-KHEDVIAREL--------IEKMIAM-------DPQKRPSAKHVLK 283
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 28 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 83
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 84 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 140
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 141 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC- 196
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 197 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 71
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 72 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 129 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC- 184
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 185 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 17/224 (7%)
Query: 285 LGHLKRYTFKELRAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAGGEV 343
LG ++ +K+ + +++LG G F ++ LVA+K + + G E
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 344 QFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRL--RDHIHGRPALDW 401
+ E+ + H N++ L + L+ + G + R+ + R A
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA--- 118
Query: 402 ARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANIL---LDEDFEAVVGDFGLAKLLDHR 458
R+ + YLH D I+HRD+K N+L LDED + ++ DFGL+K+ D
Sbjct: 119 ---SRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-- 170
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
V + GT G++APE L+ S+ D + G++ L+ G
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 40/291 (13%)
Query: 309 LGRGGFGIV-----YKGCFSDGAL-VAVKRLKDYNIAGGEVQFQTEVETIS-LAVHRNLL 361
LG G FG V Y SD A+ VAVK LK +E++ +S L H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 362 RLCGFCSTENERLLVYPYMPNGSVAS---RLRDHI---HGRPAL--------DWARRKRI 407
L G C+ L++ Y G + + R RD PA+ D
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-V 466
+ A+G+ +L + IHRD+ A NILL + DFGLA+ + + ++V
Sbjct: 151 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 467 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLH 526
R V +APE + + ++DV+ +GI L EL + G ++ G+ +D
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS------LG-SSPYPGMPVD------ 254
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
K +M+ + + EM + C +PL RP ++++++E
Sbjct: 255 --SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 303 FSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAGGEVQFQ---TEVETISLAVHR 358
FS +G G FG VY + +VA+K++ Y+ ++Q EV + H
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKM-SYSGKQSNEKWQDIIKEVRFLQKLRHP 114
Query: 359 NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYL 418
N ++ G E+ LV Y GS + L +H +P L + G +GL YL
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYC-LGSASDLLE--VHKKP-LQEVEIAAVTHGALQGLAYL 170
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEY- 477
H +IHRDVKA NILL E +GDFG A ++ + V GT +APE
Sbjct: 171 HSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVI 222
Query: 478 --LSTGQSSEKTDVFGFGILLLEL 499
+ GQ K DV+ GI +EL
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 29 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 84
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 85 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 141
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 142 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC- 197
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 198 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 50 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 105
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 106 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 162
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 163 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC- 218
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 219 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 303 FSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAGGEVQFQ---TEVETISLAVHR 358
FS +G G FG VY + +VA+K++ Y+ ++Q EV + H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMS-YSGKQSNEKWQDIIKEVRFLQKLRHP 75
Query: 359 NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYL 418
N ++ G E+ LV Y GS + L +H +P L + G +GL YL
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYCL-GSASDLLE--VHKKP-LQEVEIAAVTHGALQGLAYL 131
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEY- 477
H +IHRDVKA NILL E +GDFG A ++ + V GT +APE
Sbjct: 132 HSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVI 183
Query: 478 --LSTGQSSEKTDVFGFGILLLEL 499
+ GQ K DV+ GI +EL
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 307 NILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL--LRLC 364
LG+GGF Y+ D V ++ ++ Q E + +A+H++L +
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLK--PHQKEKMSTEIAIHKSLDNPHVV 89
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
GF + VY + S L H R A+ + T +G+ YLH
Sbjct: 90 GFHGFFEDDDFVYVVLEICRRRSLLELH-KRRKAVTEPEARYFMRQTIQGVQYLHNN--- 145
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
++IHRD+K N+ L++D + +GDFGLA ++ D + GT +IAPE L S
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTPNYIAPEVLCKKGHS 204
Query: 485 EKTDVFGFGILLLELITGQ 503
+ D++ G +L L+ G+
Sbjct: 205 FEVDIWSLGCILYTLLVGK 223
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 21 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 76
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 77 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 133
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 134 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC- 189
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 190 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 9/199 (4%)
Query: 307 NILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL--LRLC 364
LG+GGF Y+ D V ++ ++ Q E + +A+H++L +
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLK--PHQKEKMSTEIAIHKSLDNPHVV 105
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
GF + VY + S L H R A+ + T +G+ YLH
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLELH-KRRKAVTEPEARYFMRQTIQGVQYLHNN--- 161
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
++IHRD+K N+ L++D + +GDFGLA ++ D + GT +IAPE L S
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTPNYIAPEVLCKKGHS 220
Query: 485 EKTDVFGFGILLLELITGQ 503
+ D++ G +L L+ G+
Sbjct: 221 FEVDIWSLGCILYTLLVGK 239
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 44 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 99
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 100 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 156
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 157 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC- 212
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 213 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L FC ++E+L Y NG L +I + D + L
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 151
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L GT +++P
Sbjct: 152 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 253
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 50 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 105
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 106 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 162
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 163 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC- 218
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 219 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEV--QFQTEVETIS 353
R ++ + LG G FG V G G VAVK L I +V + + E++ +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHI--HGRPALDWARRKRIALGT 411
L H ++++L ST + +V Y+ G L D+I HGR ARR + +
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGE----LFDYICKHGRVEEMEARRLFQQILS 122
Query: 412 ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVG 471
A + H ++HRD+K N+LLD A + DFGL+ ++ D G+
Sbjct: 123 AVDYCHRH-----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRDSCGSPN 175
Query: 472 HIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALD 507
+ APE +S + + D++ G++L L+ G D
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 52 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 107
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 108 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 164
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 165 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC- 220
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 221 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 95 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 150
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 151 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 207
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 208 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC- 263
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 264 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 22/217 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R +++ ++G G FG+VY+ D G LVA+K+ L+D E+Q +++
Sbjct: 54 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD---- 109
Query: 355 AVHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 110 --HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 166
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVR 467
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 167 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC- 222
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 223 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 17/206 (8%)
Query: 303 FSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
F K LG G F +V + G L AVK + + G E + E+ + H N++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRL--RDHIHGRPALDWARRKRIALGTARGLLYLH 419
L + N LV + G + R+ + + A R+ + YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ------VLDAVYYLH 137
Query: 420 EQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
I+HRD+K N+L DE+ + ++ DFGL+K+ D V + GT G++APE
Sbjct: 138 RMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD--VMSTACGTPGYVAPE 192
Query: 477 YLSTGQSSEKTDVFGFGILLLELITG 502
L+ S+ D + G++ L+ G
Sbjct: 193 VLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 131/325 (40%), Gaps = 56/325 (17%)
Query: 281 PEVSLGHLKRYTFKELRAATSNFSAK-----------NILGRGGFGIVYKGCFSDGA--- 326
PE++L L +F + TS F + ++G+G FG VY G +
Sbjct: 2 PEMNLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIR 61
Query: 327 LVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVA 386
L+ ++R + + F+ EV H N++ G C + ++ ++
Sbjct: 62 LIDIERDNEDQLKA----FKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLY 117
Query: 387 SRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVV 446
S +RD + LD + ++IA +G+ YLH + I+H+D+K+ N+ D + V+
Sbjct: 118 SVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVVI 170
Query: 447 GDFGL----AKLLDHRDSHVTTAVRGTVGHIAPEY---LSTGQSSEK------TDVFGFG 493
DFGL L R G + H+APE LS +K +DVF G
Sbjct: 171 TDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALG 230
Query: 494 ILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIEL-EEMV 552
+ EL +W K + + +K N +I + +E+
Sbjct: 231 TIWYELHAR-----------------EWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEIS 273
Query: 553 QVALLCTQFNPLHRPKMSEVLKMLE 577
+ L C F RP ++++ MLE
Sbjct: 274 DILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 303 FSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
+ +++LG G F ++ LVA+K + + G E + E+ + H N++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRL--RDHIHGRPALDWARRKRIALGTARGLLYLH 419
L + L+ + G + R+ + R A R+ + YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA------SRLIFQVLDAVKYLH 133
Query: 420 EQCDPKIIHRDVKAANIL---LDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
D I+HRD+K N+L LDED + ++ DFGL+K+ D V + GT G++APE
Sbjct: 134 ---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--PGSVLSTACGTPGYVAPE 188
Query: 477 YLSTGQSSEKTDVFGFGILLLELITG 502
L+ S+ D + G++ L+ G
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 298 AATSNFSAKNILGRGGFGIVY----KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETIS 353
A + F ++ LGRG IVY KG AL +K+ D I +TE+ +
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV------RTEIGVLL 103
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRL--RDHIHGRPALDWARRKRIALGT 411
H N+++L T E LV + G + R+ + + R A D ++
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ------I 157
Query: 412 ARGLLYLHEQCDPKIIHRDVKAANILLDE---DFEAVVGDFGLAKLLDHRDSHVTTAVRG 468
+ YLHE I+HRD+K N+L D + DFGL+K+++H+ + V G
Sbjct: 158 LEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ--VLMKTVCG 212
Query: 469 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
T G+ APE L + D++ GI+ L+ G
Sbjct: 213 TPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 122/286 (42%), Gaps = 41/286 (14%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEVETISL 354
A + ILG G FG VY+G ++ + VAVK K + +F +E +
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 355 AVHRNLLRLCGFCSTENERLLV--YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTA 412
H ++++L G E +++ YPY G R ++ + + ++ L
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS------LQIC 119
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
+ + YL +HRD+ NIL+ +GDFGL++ ++ D + + R +
Sbjct: 120 KAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW 176
Query: 473 IAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLS 532
++PE ++ + + +DV+ F + + E+ L FG+ W++ G L
Sbjct: 177 MSPESINFRRFTTASDVWMFAVCMWEI------LSFGKQP------FFWLENKDVIGVLE 224
Query: 533 QMVDKDLKGNFDRIELEEMVQVALL-----CTQFNPLHRPKMSEVL 573
KG DR+ ++ L C ++P RP+ +E++
Sbjct: 225 -------KG--DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 261
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 122/286 (42%), Gaps = 41/286 (14%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEVETISL 354
A + ILG G FG VY+G ++ + VAVK K + +F +E +
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 355 AVHRNLLRLCGFCSTENERLLV--YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTA 412
H ++++L G E +++ YPY G R ++ + + ++ L
Sbjct: 82 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS------LQIC 135
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
+ + YL +HRD+ NIL+ +GDFGL++ ++ D + + R +
Sbjct: 136 KAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW 192
Query: 473 IAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLS 532
++PE ++ + + +DV+ F + + E+ L FG+ W++ G L
Sbjct: 193 MSPESINFRRFTTASDVWMFAVCMWEI------LSFGKQP------FFWLENKDVIGVLE 240
Query: 533 QMVDKDLKGNFDRIELEEMVQVALL-----CTQFNPLHRPKMSEVL 573
KG DR+ ++ L C ++P RP+ +E++
Sbjct: 241 -------KG--DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 277
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 24/229 (10%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGG-EVQFQTEVETISLAVHRNL 360
+F + LG G G+V+K LV ++L I Q E++ + +
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 361 LRLCGFCSTENERLLVYPYMPNGSV------ASRLRDHIHGRPALDWARRKRIALGTARG 414
+ G ++ E + +M GS+ A R+ + I G+ +++ +G
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK----------VSIAVIKG 135
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA-KLLDHRDSHVTTAVRGTVGHI 473
L YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 136 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYM 189
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWV 522
+PE L S ++D++ G+ L+E+ G+ + G + +LD++
Sbjct: 190 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYI 238
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 51/240 (21%)
Query: 296 LRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISL 354
LR A S+F +LG+G FG V K + D A+K+++ E + T + + L
Sbjct: 2 LRYA-SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-----TEEKLSTILSEVML 55
Query: 355 AV----------------HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPA 398
RN ++ ++ + Y NG+ L D IH
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGT----LYDLIHSE-N 110
Query: 399 LDWARRK--RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456
L+ R + R+ L Y+H Q IIHRD+K NI +DE +GDFGLAK +
Sbjct: 111 LNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNV- 166
Query: 457 HR---------------DSHVTTAVRGTVGHIAPEYLS-TGQSSEKTDVFGFGILLLELI 500
HR ++T+A+ GT ++A E L TG +EK D++ GI+ E+I
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 98/234 (41%), Gaps = 18/234 (7%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGG-------EVQFQTEVE 350
ATS + +G G +G VYK G VA+K ++ N G EV +E
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP--ALDWARRKRIA 408
H N++RL C+T + + V LR ++ P L K +
Sbjct: 62 AFE---HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRG 468
RGL +LH C I+HRD+K NIL+ + DFGLA++ ++ + V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV-- 173
Query: 469 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWV 522
T+ + APE L + D++ G + E+ + A+Q G + D +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 122/286 (42%), Gaps = 41/286 (14%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEVETISL 354
A + ILG G FG VY+G ++ + VAVK K + +F +E +
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 355 AVHRNLLRLCGFCSTENERLLV--YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTA 412
H ++++L G E +++ YPY G R ++ + + ++ L
Sbjct: 70 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS------LQIC 123
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
+ + YL +HRD+ NIL+ +GDFGL++ ++ D + + R +
Sbjct: 124 KAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW 180
Query: 473 IAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLS 532
++PE ++ + + +DV+ F + + E+ L FG+ W++ G L
Sbjct: 181 MSPESINFRRFTTASDVWMFAVCMWEI------LSFGKQP------FFWLENKDVIGVLE 228
Query: 533 QMVDKDLKGNFDRIELEEMVQVALL-----CTQFNPLHRPKMSEVL 573
KG DR+ ++ L C ++P RP+ +E++
Sbjct: 229 -------KG--DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 265
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 113/267 (42%), Gaps = 32/267 (11%)
Query: 264 RYRHNQQI-FFDVNDQYDPEVSLGHLKRYTFK-ELRAATSNFSAKNILGRGGFGIVYK-- 319
++R+ Q+ V D E + Y + + N +LG G FG V
Sbjct: 6 QFRYESQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNAT 65
Query: 320 --GCFSDGA--LVAVKRLKDYNIAGGEVQFQTEVETIS-LAVHRNLLRLCGFCSTENERL 374
G G VAVK LK+ + +E++ ++ L H N++ L G C+
Sbjct: 66 AYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIY 125
Query: 375 LVYPYMPNGSVASRLRD--HIHGRPALDWARRKRI-----------------ALGTARGL 415
L++ Y G + + LR +++ +KR+ A A+G+
Sbjct: 126 LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGM 185
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK-LLDHRDSHVTTAVRGTVGHIA 474
+L + +HRD+ A N+L+ + DFGLA+ ++ + V R V +A
Sbjct: 186 EFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMA 242
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELIT 501
PE L G + K+DV+ +GILL E+ +
Sbjct: 243 PESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 98/234 (41%), Gaps = 18/234 (7%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGG-------EVQFQTEVE 350
ATS + +G G +G VYK G VA+K ++ N G EV +E
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP--ALDWARRKRIA 408
H N++RL C+T + + V LR ++ P L K +
Sbjct: 62 AFE---HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRG 468
RGL +LH C I+HRD+K NIL+ + DFGLA++ ++ + V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-- 173
Query: 469 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWV 522
T+ + APE L + D++ G + E+ + A+Q G + D +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVY----KGCFSDGALVAVKRLK-DYNIAGGEVQFQTEVET 351
R ++F+ +LG+G FG V KG L A+K LK D I +V+ T VE
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRKGT---EELYAIKILKKDVVIQDDDVEC-TMVEK 70
Query: 352 ISLAVHRN---LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
LA+ L +L T + V Y+ G L HI + A
Sbjct: 71 RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGD----LMYHIQQVGKFKEPQAVFYA 126
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTT-AVR 467
+ GL +LH++ II+RD+K N++LD + + DFG+ K +H VTT
Sbjct: 127 AEISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFC 181
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507
GT +IAPE ++ + D + +G+LL E++ GQ D
Sbjct: 182 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 126
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 187 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 10/197 (5%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
+G G +G+VYK S G +VA+KR++ D G E+ + H N++ L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
+E LV+ +M ++ D + L ++ K RG+ + H+ +I+
Sbjct: 89 HSERCLTLVFEFMEKD--LKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQH---RIL 141
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL-STGQSSEK 486
HRD+K N+L++ D + DFGLA+ T V T+ + AP+ L + + S
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTS 200
Query: 487 TDVFGFGILLLELITGQ 503
D++ G + E+ITG+
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 125
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 186 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 10/197 (5%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
+G G +G+VYK S G +VA+KR++ D G E+ + H N++ L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
+E LV+ +M ++ D + L ++ K RG+ + H+ +I+
Sbjct: 89 HSERCLTLVFEFMEKD--LKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQH---RIL 141
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL-STGQSSEK 486
HRD+K N+L++ D + DFGLA+ T V T+ + AP+ L + + S
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTS 200
Query: 487 TDVFGFGILLLELITGQ 503
D++ G + E+ITG+
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 125
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 186 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSXQEYSDWKEK 223
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQFQTEVETISLA 355
R +++ ++G G FG+VY+ D G LVA+K+ + G+ E++ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQGKAFKNRELQIMRKL 70
Query: 356 VHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVRG 468
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 130 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC-- 184
Query: 469 TVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 16/227 (7%)
Query: 302 NFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVHR 358
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 359 NLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417
++L F ++E+L Y NG L +I + D + L Y
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGC----LLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAPE 476
LH + IIHRD+K NILL+ED + DFG AK+L + GT +++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 477 YLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
L+ +S+ +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 248
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 37/275 (13%)
Query: 309 LGRGGFGIVYKGCFSDGAL-VAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLC-G 365
+GRG F VYKG ++ + VA L+D + E Q F+ E E + H N++R
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 366 FCSTENER---LLVYPYMPNGSVASRLRDHIHGRPAL--DWARRKRIALGTARGLLYLHE 420
+ ST + +LV +G++ + L+ + + W R+ +GL +LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKGLQFLHT 147
Query: 421 QCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
+ P IIHRD+K NI + +V +GD GLA L + + AV GT APE
Sbjct: 148 RT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPEXYE 203
Query: 480 TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539
+ E DV+ FG LE T + + A Q + + V +
Sbjct: 204 E-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQ----------------IYRRVTSGV 246
Query: 540 K-GNFDRIELEEMVQVALLCTQFNPLHRPKMSEVL 573
K +FD++ + E+ ++ C + N R + ++L
Sbjct: 247 KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 125
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 186 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGG-EVQFQTEVETISLAVHRNL 360
+F + LG G G+V+K LV ++L I Q E++ + +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 361 LRLCGFCSTENERLLVYPYMPNGSV------ASRLRDHIHGRPALDWARRKRIALGTARG 414
+ G ++ E + +M GS+ A R+ + I G+ +++ +G
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK----------VSIAVIKG 178
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA-KLLDHRDSHVTTAVRGTVGHI 473
L YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 179 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYM 232
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQ 503
+PE L S ++D++ G+ L+E+ G+
Sbjct: 233 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 302 NFSAKNILGRGGFGIVYKGCF--SDGALV--AVKRLKDYNIAGGEVQ-FQTEVETISLAV 356
F+ +LG+G FG V + DG+ V AVK LK IA +++ F E +
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 357 HRNLLRLCGFCSTENER------LLVYPYMPNGSV-----ASRLRDHIHGRPALDWARRK 405
H ++ +L G + +++ P+M +G + ASR+ ++ P R
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR-- 141
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVT-T 464
+ A G+ YL + IHRD+ A N +L ED V DFGL++ + D +
Sbjct: 142 -FMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGC 197
Query: 465 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
A + V +A E L+ + +DV+ FG+ + E++T
Sbjct: 198 ASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 126/279 (45%), Gaps = 59/279 (21%)
Query: 305 AKNILGRGGFG-IVYKGCFSDGALVAVKR-LKDY-NIAGGEVQFQTEVETISLAVHRNLL 361
++ ILG G G +V++G F G VAVKR L D+ +IA E++ TE + H N++
Sbjct: 19 SEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDD-----HPNVI 72
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKR-----IAL--GTARG 414
R +CS +R L Y+ L+D + + D + + I+L A G
Sbjct: 73 RY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 415 LLYLHEQCDPKIIHRDVKAANILLD-------------EDFEAVVGDFGLAKLLDHRDSH 461
+ +LH KIIHRD+K NIL+ E+ ++ DFGL K LD S
Sbjct: 128 VAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 462 VTTAVR---GTVGHIAPEYLSTGQS-------SEKTDVFGFGILLLELIT-GQRAL--DF 508
T + GT G APE L + + D+F G + +++ G+ +
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244
Query: 509 GRAAN-QRGVM-LDWVKKLHQEG-------KLSQMVDKD 538
R +N RG+ LD +K LH +SQM+D D
Sbjct: 245 SRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD 283
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 125
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 186 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 98/234 (41%), Gaps = 18/234 (7%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGG-------EVQFQTEVE 350
ATS + +G G +G VYK G VA+K ++ N G EV +E
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP--ALDWARRKRIA 408
H N++RL C+T + + V LR ++ P L K +
Sbjct: 62 AFE---HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRG 468
RGL +LH C I+HRD+K NIL+ + DFGLA++ ++ + V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV-- 173
Query: 469 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWV 522
T+ + APE L + D++ G + E+ + A+Q G + D +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQFQTEVETISLA 355
R +++ ++G G FG+VY+ D G LVA+K+ + G+ E++ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQGKAFKNRELQIMRKL 70
Query: 356 VHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVRG 468
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 130 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 184
Query: 469 TVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L F ++E+L Y NG L +I + D + L
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L A GT +++P
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 246
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 59/300 (19%)
Query: 302 NFSAKNI-----LGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETIS-- 353
+F+A+++ +GRG +G V K G ++AVKR++ + Q +++ +
Sbjct: 18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRS 77
Query: 354 ------LAVHRNLLRL--CGFC----STENERLLVYPYMPNGSVASRLRDHIHGRPALDW 401
+ + L R C C ST ++ Y Y V + + I G+
Sbjct: 78 SDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDV---IPEEILGK----- 129
Query: 402 ARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH 461
I L T + L +L E KIIHRD+K +NILLD + DFG++ L DS
Sbjct: 130 -----ITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSI 180
Query: 462 VTTAVRGTVGHIAPEYLSTGQSSE----KTDVFGFGILLLELITGQRALDFGRAANQRGV 517
T G ++APE + S + ++DV+ GI L EL TG R
Sbjct: 181 AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG------------RFP 228
Query: 518 MLDWVKKLHQEGKLSQMVDKD---LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLK 574
W Q L+Q+V D L + +R + LC + RPK E+LK
Sbjct: 229 YPKWNSVFDQ---LTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGG-EVQFQTEVETISLAVHRNL 360
+F + LG G G+V+K LV ++L I Q E++ + +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 361 LRLCGFCSTENERLLVYPYMPNGSV------ASRLRDHIHGRPALDWARRKRIALGTARG 414
+ G ++ E + +M GS+ A R+ + I G+ +++ +G
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK----------VSIAVIKG 116
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA-KLLDHRDSHVTTAVRGTVGHI 473
L YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYM 170
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQ 503
+PE L S ++D++ G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQFQTEVETISLA 355
R +++ ++G G FG+VY+ D G LVA+K+ + G+ E++ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-----VLQGKAFKNRELQIMRKL 70
Query: 356 VHRNLLRLCGFCSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
H N++RL F + E+ LV Y+P +V R + + L K
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVRG 468
R L Y+H I HRD+K N+LLD D + + DFG AK L + +V+
Sbjct: 130 QLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 184
Query: 469 TVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQ 503
+ + APE + + DV+ G +L EL+ GQ
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 125
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 186 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ ++ H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 126
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 187 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 126
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 187 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 126
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 187 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 126
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 187 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 125
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 186 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 21/237 (8%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGG----------EVQFQT 347
ATS + +G G +G VYK G VA+K ++ N GG EV
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP--ALDWARRK 405
+E H N++RL C+T + + V LR ++ P L K
Sbjct: 67 RLEAFE---HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK 123
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA 465
+ RGL +LH C I+HRD+K NIL+ + DFGLA++ ++ + T
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTP 178
Query: 466 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWV 522
V T+ + APE L + D++ G + E+ + A+Q G + D +
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 235
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGG-EVQFQTEVETISLAVHRNL 360
+F + LG G G+V+K LV ++L I Q E++ + +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 361 LRLCGFCSTENERLLVYPYMPNGSV------ASRLRDHIHGRPALDWARRKRIALGTARG 414
+ G ++ E + +M GS+ A R+ + I G+ +++ +G
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK----------VSIAVIKG 116
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA-KLLDHRDSHVTTAVRGTVGHI 473
L YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYM 170
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQ 503
+PE L S ++D++ G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 17/246 (6%)
Query: 290 RYTFKELRAATSN-FSAKNILGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAG--GEVQ 344
++ + E + T N F +LG+GGFG V C + G + A K+L+ I GE
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVC-ACQVRATGKMYACKKLEKKRIKKRKGEAM 230
Query: 345 FQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIH--GRPALDWA 402
E + + R ++ L T++ LV M G L+ HI+ G+ A
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGD----LKFHIYHMGQAGFPEA 286
Query: 403 RRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV 462
R A GL LH + +I++RD+K NILLD+ + D GLA + +
Sbjct: 287 RAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQT 341
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWV 522
GTVG++APE + + + D + G LL E+I GQ + +R + V
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV 401
Query: 523 KKLHQE 528
K++ +E
Sbjct: 402 KEVPEE 407
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 17/246 (6%)
Query: 290 RYTFKELRAATSN-FSAKNILGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAG--GEVQ 344
++ + E + T N F +LG+GGFG V C + G + A K+L+ I GE
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVC-ACQVRATGKMYACKKLEKKRIKKRKGEAM 230
Query: 345 FQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIH--GRPALDWA 402
E + + R ++ L T++ LV M G L+ HI+ G+ A
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGD----LKFHIYHMGQAGFPEA 286
Query: 403 RRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV 462
R A GL LH + +I++RD+K NILLD+ + D GLA + +
Sbjct: 287 RAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP--EGQT 341
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWV 522
GTVG++APE + + + D + G LL E+I GQ + +R + V
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV 401
Query: 523 KKLHQE 528
K++ +E
Sbjct: 402 KEVPEE 407
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 22/209 (10%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGG-EVQFQTEVETISLAVHRNL 360
+F + LG G G+V+K LV ++L I Q E++ + +
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 361 LRLCGFCSTENERLLVYPYMPNGSV------ASRLRDHIHGRPALDWARRKRIALGTARG 414
+ G ++ E + +M GS+ A R+ + I G+ +++ +G
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK----------VSIAVIKG 143
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
L YL E+ KI+HRDVK +NIL++ E + DFG++ L DS + V GT +++
Sbjct: 144 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV-GTRSYMS 198
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITGQ 503
PE L S ++D++ G+ L+E+ G+
Sbjct: 199 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 302 NFSAKNILGRGGFGIV-YKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRN 359
N+ +G+G F V G VAVK + + +Q EV + + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TE LV Y G V L HGR AR K + +A + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSA--VQYCH 130
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ I+HRD+KA N+LLD D + DFG + + T G+ + APE L
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-LF 184
Query: 480 TGQSSE--KTDVFGFGILLLELITGQRALD 507
G+ + + DV+ G++L L++G D
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 302 NFSAKNILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRN 359
N+ +G+G F V G VAVK + + +Q EV + + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TE LV Y G V L HGR AR K + +A + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSA--VQYCH 130
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ I+HRD+KA N+LLD D + DFG + + T G+ + APE L
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-LF 184
Query: 480 TGQSSE--KTDVFGFGILLLELITGQRALD 507
G+ + + DV+ G++L L++G D
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGG-EVQFQTEVETISLAVHRNL 360
+F + LG G G+V+K LV ++L I Q E++ + +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 361 LRLCGFCSTENERLLVYPYMPNGSV------ASRLRDHIHGRPALDWARRKRIALGTARG 414
+ G ++ E + +M GS+ A R+ + I G+ +++ +G
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK----------VSIAVIKG 116
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA-KLLDHRDSHVTTAVRGTVGHI 473
L YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYM 170
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQ 503
+PE L S ++D++ G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 125
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 186 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 125
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 186 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGG-EVQFQTEVETISLAVHRNL 360
+F + LG G G+V+K LV ++L I Q E++ + +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 361 LRLCGFCSTENERLLVYPYMPNGSV------ASRLRDHIHGRPALDWARRKRIALGTARG 414
+ G ++ E + +M GS+ A R+ + I G+ +++ +G
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK----------VSIAVIKG 116
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA-KLLDHRDSHVTTAVRGTVGHI 473
L YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 117 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYM 170
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQ 503
+PE L S ++D++ G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 125
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 186 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGG-EVQFQTEVETISLAVHRNL 360
+F + LG G G+V+K LV ++L I Q E++ + +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 361 LRLCGFCSTENERLLVYPYMPNGSV------ASRLRDHIHGRPALDWARRKRIALGTARG 414
+ G ++ E + +M GS+ A R+ + I G+ +++ +G
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK----------VSIAVIKG 116
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA-KLLDHRDSHVTTAVRGTVGHI 473
L YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 117 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYM 170
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQ 503
+PE L S ++D++ G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 124
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 185 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 222
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 125
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 186 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 302 NFSAKNILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRN 359
N+ +G+G F V G VAVK + + +Q EV + + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TE LV Y G V L HGR AR K + +A + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSA--VQYCH 130
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ I+HRD+KA N+LLD D + DFG + + A G + APE L
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPE-LF 184
Query: 480 TGQSSE--KTDVFGFGILLLELITGQRALD 507
G+ + + DV+ G++L L++G D
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L F ++E+L Y NG L +I + D + L
Sbjct: 70 PFFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 124
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L GT +++P
Sbjct: 125 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 181
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 182 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 226
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGCF----SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G FG V++G + + VA+K K+ +F E T+ H ++++L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
G TEN ++ G + S L+ + +LD A A + L YL +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRKY---SLDLASLILYAYQLSTALAYLESK--- 130
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
+ +HRD+ A N+L+ + +GDFGL++ ++ + + + + +APE ++ + +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 485 EKTDVFGFGILLLELI 500
+DV+ FG+ + E++
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 125
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 186 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 126
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 187 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 126
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 187 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 14/220 (6%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G +G V ++ A VAVK + + E+ + H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
N + L Y G + R+ I G P D +R G++YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGI 126
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SS 484
HRD+K N+LLDE + DFGLA + + + + + GT+ ++APE L + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 485 EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E DV+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 187 EPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 308 ILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
+LG+G +GIVY G S+ +A+K + + + + E+ H+N+++ G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQ-PLHEEIALHKHLKHKNIVQYLGS 87
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR---GLLYLHEQCD 423
S + +P GS+++ LR P D + I T + GL YLH D
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWG--PLKD--NEQTIGFYTKQILEGLKYLH---D 140
Query: 424 PKIIHRDVKAANILLDEDFEAV--VGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG 481
+I+HRD+K N+L++ + V + DFG +K L + T GT+ ++APE + G
Sbjct: 141 NQIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKG 198
Query: 482 QS--SEKTDVFGFGILLLELITGQ 503
+ D++ G ++E+ TG+
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 34/225 (15%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQF-QTEVETISLA 355
R + +G+G +G V++G + G VAVK + + F +TE+ L
Sbjct: 4 RTVARQVALVECVGKGRYGEVWRGLWH-GESVAVKIFSSRD---EQSWFRETEIYNTVLL 59
Query: 356 VHRNLLRLCGFCSTE-------NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N+L GF +++ + L+ Y +GS+ L+ R L+ R+A
Sbjct: 60 RHDNIL---GFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQ-----RQTLEPHLALRLA 111
Query: 409 LGTARGLLYLH-----EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVT 463
+ A GL +LH Q P I HRD K+ N+L+ + + + D GLA + ++
Sbjct: 112 VSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLD 171
Query: 464 TAVRGTVG---HIAPEYLSTG------QSSEKTDVFGFGILLLEL 499
VG ++APE L +S + TD++ FG++L E+
Sbjct: 172 IGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L F ++E+L Y NG L +I + D + L
Sbjct: 69 PFFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 123
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L GT +++P
Sbjct: 124 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 180
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 181 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 225
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 16/199 (8%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLK----DYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G +G+VYK + G A+K+++ D I ++ E+ + H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR---EISILKELKHSNIVKLY 66
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
T+ +LV+ ++ +L D G L+ K L G+ Y H D
Sbjct: 67 DVIHTKKRLVLVFEHLDQD--LKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCH---DR 119
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL-STGQS 483
+++HRD+K N+L++ + E + DFGLA+ T V T+ + AP+ L + +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKY 178
Query: 484 SEKTDVFGFGILLLELITG 502
S D++ G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 16/199 (8%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLK----DYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G +G+VYK + G A+K+++ D I ++ E+ + H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR---EISILKELKHSNIVKLY 66
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
T+ +LV+ ++ +L D G L+ K L G+ Y H D
Sbjct: 67 DVIHTKKRLVLVFEHLDQD--LKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCH---DR 119
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL-STGQS 483
+++HRD+K N+L++ + E + DFGLA+ T V T+ + AP+ L + +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKY 178
Query: 484 SEKTDVFGFGILLLELITG 502
S D++ G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGCF---SDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G FG V++G + + AL VA+K K+ +F E T+ H ++++L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
G TEN ++ G + S L+ + +LD A A + L YL +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVRKY---SLDLASLILYAYQLSTALAYLESK--- 130
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
+ +HRD+ A N+L+ + +GDFGL++ ++ + + + + +APE ++ + +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 485 EKTDVFGFGILLLELI 500
+DV+ FG+ + E++
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L F ++E+L Y NG L +I + D + L
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 143
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L + GT +++P
Sbjct: 144 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 245
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L F ++E+L Y NG L +I + D + L
Sbjct: 68 PFFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 122
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L GT +++P
Sbjct: 123 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 179
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 180 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 224
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 34/229 (14%)
Query: 283 VSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGG- 341
++LG LK F+++ LG G G+V+K LV ++L I
Sbjct: 1 MALGELKDDDFEKISE----------LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI 50
Query: 342 EVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSV------ASRLRDHIHG 395
Q E++ + ++ G ++ E + +M GS+ A R+ + I G
Sbjct: 51 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 110
Query: 396 RPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA-KL 454
+ +++ +GL YL E+ KI+HRDVK +NIL++ E + DFG++ +L
Sbjct: 111 K----------VSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 158
Query: 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
+D + GT +++PE L S ++D++ G+ L+E+ G+
Sbjct: 159 ID----EMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGCF---SDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G FG V++G + + AL VA+K K+ +F E T+ H ++++L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
G TEN ++ G + S L+ + +LD A A + L YL +
Sbjct: 106 GVI-TENPVWIIMELCTLGELRSFLQVRKY---SLDLASLILYAYQLSTALAYLESK--- 158
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
+ +HRD+ A N+L+ + +GDFGL++ ++ + + + + +APE ++ + +
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 485 EKTDVFGFGILLLELI 500
+DV+ FG+ + E++
Sbjct: 219 SASDVWMFGVCMWEIL 234
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 34/225 (15%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQF-QTEVETISLA 355
R + + +G+G +G V++G + G VAVK + + F +TE+ +
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRD---EKSWFRETELYNTVML 59
Query: 356 VHRNLLRLCGFCSTE-------NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N+L GF +++ + L+ Y GS+ L+ LD RI
Sbjct: 60 RHENIL---GFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIV 111
Query: 409 LGTARGLLYLH-----EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVT 463
L A GL +LH Q P I HRD+K+ NIL+ ++ + + D GLA + + +
Sbjct: 112 LSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLD 171
Query: 464 TAVRGTVG---HIAPEYLSTG------QSSEKTDVFGFGILLLEL 499
VG ++APE L S ++ D++ FG++L E+
Sbjct: 172 VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 16/227 (7%)
Query: 302 NFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVHR 358
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 359 NLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417
++L F ++E+L Y NG L +I + D + L Y
Sbjct: 94 FFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALEY 148
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAPE 476
LH + IIHRD+K NILL+ED + DFG AK+L + GT +++PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 477 YLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 249
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGCF---SDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G FG V++G + + AL VA+K K+ +F E T+ H ++++L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
G TEN ++ G + S L+ + +LD A A + L YL +
Sbjct: 75 GVI-TENPVWIIMELCTLGELRSFLQVRKY---SLDLASLILYAYQLSTALAYLESK--- 127
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
+ +HRD+ A N+L+ + +GDFGL++ ++ + + + + +APE ++ + +
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 485 EKTDVFGFGILLLELI 500
+DV+ FG+ + E++
Sbjct: 188 SASDVWMFGVCMWEIL 203
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L F ++E+L Y NG L +I + D + L
Sbjct: 67 PFFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 121
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L GT +++P
Sbjct: 122 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 179 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 223
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 309 LGRGGFGIVYKGCF----SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G FG V++G + + VA+K K+ +F E T+ H ++++L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
G TEN ++ G + S L+ + +LD A A + L YL +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK--- 130
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT--VGHIAPEYLSTGQ 482
+ +HRD+ A N+L+ + +GDFGL++ ++ DS A +G + +APE ++ +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTXXKASKGKLPIKWMAPESINFRR 188
Query: 483 SSEKTDVFGFGILLLELI 500
+ +DV+ FG+ + E++
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 104/240 (43%), Gaps = 51/240 (21%)
Query: 296 LRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISL 354
LR A S+F +LG+G FG V K + D A+K+++ E + T + + L
Sbjct: 2 LRYA-SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-----TEEKLSTILSEVML 55
Query: 355 AV----------------HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPA 398
RN ++ ++ + Y N + L D IH
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRT----LYDLIHSE-N 110
Query: 399 LDWARRK--RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456
L+ R + R+ L Y+H Q IIHRD+K NI +DE +GDFGLAK +
Sbjct: 111 LNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNV- 166
Query: 457 HR---------------DSHVTTAVRGTVGHIAPEYLS-TGQSSEKTDVFGFGILLLELI 500
HR ++T+A+ GT ++A E L TG +EK D++ GI+ E+I
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGCF---SDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G FG V++G + + AL VA+K K+ +F E T+ H ++++L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
G TEN ++ G + S L+ + +LD A A + L YL +
Sbjct: 80 GVI-TENPVWIIMELCTLGELRSFLQVRKY---SLDLASLILYAYQLSTALAYLESK--- 132
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
+ +HRD+ A N+L+ + +GDFGL++ ++ + + + + +APE ++ + +
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 485 EKTDVFGFGILLLELI 500
+DV+ FG+ + E++
Sbjct: 193 SASDVWMFGVCMWEIL 208
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 16/211 (7%)
Query: 302 NFSAKNILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRN 359
N+ +G+G F V G VAVK + + +Q EV + + H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TE LV Y G V L H W + K A R ++
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-------GWMKEKE-ARAKFRQIVSAV 119
Query: 420 EQCDPK-IIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL 478
+ C K I+HRD+KA N+LLD D + DFG + + T G+ + APE L
Sbjct: 120 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-L 176
Query: 479 STGQSSE--KTDVFGFGILLLELITGQRALD 507
G+ + + DV+ G++L L++G D
Sbjct: 177 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 308 ILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
+LG+G +GIVY G S+ +A+K + + + + E+ H+N+++ G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQ-PLHEEIALHKHLKHKNIVQYLGS 73
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR---GLLYLHEQCD 423
S + +P GS+++ LR P D + I T + GL YLH D
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWG--PLKD--NEQTIGFYTKQILEGLKYLH---D 126
Query: 424 PKIIHRDVKAANILLDEDFEAV--VGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG 481
+I+HRD+K N+L++ + V + DFG +K L + T GT+ ++APE + G
Sbjct: 127 NQIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKG 184
Query: 482 QS--SEKTDVFGFGILLLELITGQ 503
+ D++ G ++E+ TG+
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGK 208
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGCF----SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G FG V++G + + VA+K K+ +F E T+ H ++++L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
G TEN ++ G + S L+ + +LD A A + L YL +
Sbjct: 83 GVI-TENPVWIIMELCTLGELRSFLQVRKY---SLDLASLILYAYQLSTALAYLESK--- 135
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
+ +HRD+ A N+L+ + +GDFGL++ ++ + + + + +APE ++ + +
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 485 EKTDVFGFGILLLELI 500
+DV+ FG+ + E++
Sbjct: 196 SASDVWMFGVCMWEIL 211
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGCF---SDGAL-VAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G FG V++G + + AL VA+K K+ +F E T+ H ++++L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
G TEN ++ G + S L+ + +LD A A + L YL +
Sbjct: 81 GVI-TENPVWIIMELCTLGELRSFLQVRKY---SLDLASLILYAYQLSTALAYLESK--- 133
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
+ +HRD+ A N+L+ + +GDFGL++ ++ + + + + +APE ++ + +
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 485 EKTDVFGFGILLLELI 500
+DV+ FG+ + E++
Sbjct: 194 SASDVWMFGVCMWEIL 209
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 16/199 (8%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLK----DYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G +G+VYK + G A+K+++ D I ++ E+ + H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR---EISILKELKHSNIVKLY 66
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
T+ +LV+ ++ +L D G L+ K L G+ Y H D
Sbjct: 67 DVIHTKKRLVLVFEHLDQD--LKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCH---DR 119
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL-STGQS 483
+++HRD+K N+L++ + E + DFGLA+ T + T+ + AP+ L + +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKY 178
Query: 484 SEKTDVFGFGILLLELITG 502
S D++ G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 302 NFSAKNILGRGGFGIV-YKGCFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRN 359
N+ +G+G F V G VAV+ + + +Q EV + + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TE LV Y G V L HGR AR K + +A + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSA--VQYCH 130
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ I+HRD+KA N+LLD D + DFG + + T G+ + APE L
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-LF 184
Query: 480 TGQSSE--KTDVFGFGILLLELITGQRALD 507
G+ + + DV+ G++L L++G D
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 34/225 (15%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQF-QTEVETISLA 355
R + +G+G +G V++G + G VAVK + + F +TE+ +
Sbjct: 4 RTVAHQITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRD---EKSWFRETELYNTVML 59
Query: 356 VHRNLLRLCGFCSTE-------NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N+L GF +++ + L+ Y GS+ L+ LD RI
Sbjct: 60 RHENIL---GFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIV 111
Query: 409 LGTARGLLYLH-----EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVT 463
L A GL +LH Q P I HRD+K+ NIL+ ++ + + D GLA + + +
Sbjct: 112 LSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLD 171
Query: 464 TAVRGTVG---HIAPEYLSTG------QSSEKTDVFGFGILLLEL 499
VG ++APE L S ++ D++ FG++L E+
Sbjct: 172 VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 309 LGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
LG G FG VYK + GAL A K ++ + E + E+E ++ H +++L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPYIVKLLGAY 77
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHG--RPALDWARRKRIALGTARGLLYLHEQCDPK 425
+ + ++ + P G+V + + + G P + R+ + L +LH + +
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSK---R 129
Query: 426 IIHRDVKAANILLDEDFEAVVGDFGLA----KLLDHRDSHVTTAVRGTVGHIAPEYLSTG 481
IIHRD+KA N+L+ + + + DFG++ K L RDS + T + E +
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 482 QSSEKTDVFGFGILLLEL 499
K D++ GI L+E+
Sbjct: 190 PYDYKADIWSLGITLIEM 207
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L F ++E+L Y NG L +I + D + L
Sbjct: 74 PFFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 128
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L GT +++P
Sbjct: 129 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 186 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L F ++E+L Y NG L +I + D + L
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L GT +++P
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 248
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 309 LGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
LG G FG VYK + GAL A K ++ + E + E+E ++ H +++L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPYIVKLLGAY 85
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHG--RPALDWARRKRIALGTARGLLYLHEQCDPK 425
+ + ++ + P G+V + + + G P + R+ + L +LH + +
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSK---R 137
Query: 426 IIHRDVKAANILLDEDFEAVVGDFGLA----KLLDHRDSHVTTAVRGTVGHIAPEYLSTG 481
IIHRD+KA N+L+ + + + DFG++ K L RDS + T + E +
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 482 QSSEKTDVFGFGILLLEL 499
K D++ GI L+E+
Sbjct: 198 PYDYKADIWSLGITLIEM 215
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 34/225 (15%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQF-QTEVETISLA 355
R + +G+G +G V++G + G VAVK + + F +TE+ +
Sbjct: 33 RTVARQITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRD---EKSWFRETELYNTVML 88
Query: 356 VHRNLLRLCGFCSTE-------NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIA 408
H N+L GF +++ + L+ Y GS+ L+ LD RI
Sbjct: 89 RHENIL---GFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIV 140
Query: 409 LGTARGLLYLH-----EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVT 463
L A GL +LH Q P I HRD+K+ NIL+ ++ + + D GLA + + +
Sbjct: 141 LSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLD 200
Query: 464 TAVRGTVG---HIAPEYLSTG------QSSEKTDVFGFGILLLEL 499
VG ++APE L S ++ D++ FG++L E+
Sbjct: 201 VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L F ++E+L Y NG L +I + D + L
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L GT +++P
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 248
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 7/200 (3%)
Query: 307 NILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VH-RNLLRL 363
+LGRGGFG V+ + G L A K+L + + VE LA VH R ++ L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 364 CGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCD 423
T+ + LV M G + + + P R GL +LH++
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-- 308
Query: 424 PKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQS 483
II+RD+K N+LLD+D + D GLA L + T GT G +APE L +
Sbjct: 309 -NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEY 366
Query: 484 SEKTDVFGFGILLLELITGQ 503
D F G+ L E+I +
Sbjct: 367 DFSVDYFALGVTLYEMIAAR 386
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L F ++E+L Y NG L +I + D + L
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 143
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L GT +++P
Sbjct: 144 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 245
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 16/212 (7%)
Query: 303 FSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
+ K LG GGFG V + D G VA+K+ + ++ E++ + H N++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 362 RL------CGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
+ + LL Y G + L + L + + + L
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL-NQFENCCGLKEGPIRTLLSDISSAL 135
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVG---DFGLAKLLDHRDSHVTTAVRGTVGH 472
YLHE +IIHRD+K NI+L + ++ D G AK LD + T GT+ +
Sbjct: 136 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ--GELCTEFVGTLQY 190
Query: 473 IAPEYLSTGQSSEKTDVFGFGILLLELITGQR 504
+APE L + + D + FG L E ITG R
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L F ++E+L Y NG L +I + D + L
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 147
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L GT +++P
Sbjct: 148 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 249
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L F ++E+L Y NG L +I + D + L
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L GT +++P
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 246
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 7/200 (3%)
Query: 307 NILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VH-RNLLRL 363
+LGRGGFG V+ + G L A K+L + + VE LA VH R ++ L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 364 CGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCD 423
T+ + LV M G + + + P R GL +LH++
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-- 308
Query: 424 PKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQS 483
II+RD+K N+LLD+D + D GLA L + T GT G +APE L +
Sbjct: 309 -NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEY 366
Query: 484 SEKTDVFGFGILLLELITGQ 503
D F G+ L E+I +
Sbjct: 367 DFSVDYFALGVTLYEMIAAR 386
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 16/212 (7%)
Query: 303 FSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
+ K LG GGFG V + D G VA+K+ + ++ E++ + H N++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 362 RL------CGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
+ + LL Y G + L + L + + + L
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL-NQFENCCGLKEGPIRTLLSDISSAL 134
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVG---DFGLAKLLDHRDSHVTTAVRGTVGH 472
YLHE +IIHRD+K NI+L + ++ D G AK LD + T GT+ +
Sbjct: 135 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ--GELCTEFVGTLQY 189
Query: 473 IAPEYLSTGQSSEKTDVFGFGILLLELITGQR 504
+APE L + + D + FG L E ITG R
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 127/289 (43%), Gaps = 41/289 (14%)
Query: 309 LGRGGFG-IVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVET-ISLAVHRNLL 361
LGRG FG ++ F + VAVK LK+ +E++ I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 362 RLCGFCSTENERLLV-YPYMPNGSVASRLR----DHIHGRPA------LDWARRKRIALG 410
L G C+ L+V + G++++ LR + + +P L +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-VRGT 469
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + V R
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 470 VGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKKLHQ 527
+ +APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++L +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRRL-K 265
Query: 528 EGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
EG + D EM Q L C P RP SE+++ L
Sbjct: 266 EGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 328 VAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVAS 387
VAVK + + E+ + H N+++ G N + L Y G +
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 388 RLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVG 447
R+ I G P D +R G++YLH I HRD+K N+LLDE +
Sbjct: 94 RIEPDI-GMPEPD---AQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKIS 146
Query: 448 DFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELITGQRA 505
DFGLA + + + + + GT+ ++APE L + +E DV+ GI+L ++ G+
Sbjct: 147 DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-- 204
Query: 506 LDFGRAANQRGVMLDWVKK 524
L + + ++ DW +K
Sbjct: 205 LPWDQPSDSCQEYSDWKEK 223
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L F ++E+L Y NG L +I + D + L
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L GT +++P
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 248
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 17/229 (7%)
Query: 302 NFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVHR 358
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 359 NLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417
++L F ++E+L Y NG L +I + D + L Y
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAPE 476
LH + IIHRD+K NILL+ED + DFG AK+L GT +++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 477 YLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKL 525
L+ + + +D++ G ++ +L+ G L RA N+ G++ + KL
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAG---LPPFRAGNE-GLIFAKIIKL 249
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L F ++E+L Y NG L +I + D + L
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L GT +++P
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 246
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 7/200 (3%)
Query: 307 NILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VH-RNLLRL 363
+LGRGGFG V+ + G L A K+L + + VE LA VH R ++ L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 364 CGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCD 423
T+ + LV M G + + + P R GL +LH++
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-- 308
Query: 424 PKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQS 483
II+RD+K N+LLD+D + D GLA L + T GT G +APE L +
Sbjct: 309 -NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEY 366
Query: 484 SEKTDVFGFGILLLELITGQ 503
D F G+ L E+I +
Sbjct: 367 DFSVDYFALGVTLYEMIAAR 386
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 101/227 (44%), Gaps = 16/227 (7%)
Query: 302 NFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVHR 358
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 359 NLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417
++L F ++E+L Y NG L +I + D + L Y
Sbjct: 96 FFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALEY 150
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAPE 476
LH + IIHRD+K NILL+ED + DFG AK+L GT +++PE
Sbjct: 151 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 477 YLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 251
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 7/200 (3%)
Query: 307 NILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VH-RNLLRL 363
+LGRGGFG V+ + G L A K+L + + VE LA VH R ++ L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 364 CGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCD 423
T+ + LV M G + + + P R GL +LH++
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-- 308
Query: 424 PKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQS 483
II+RD+K N+LLD+D + D GLA L + T GT G +APE L +
Sbjct: 309 -NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEY 366
Query: 484 SEKTDVFGFGILLLELITGQ 503
D F G+ L E+I +
Sbjct: 367 DFSVDYFALGVTLYEMIAAR 386
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 39/287 (13%)
Query: 309 LGRGGFG-IVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVET-ISLAVHRNLL 361
LGRG FG ++ F + VAVK LK+ +E++ I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 362 RLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHG--------RPALDWARRKRIALGTA 412
L G C+ L+V + G++++ LR + + L + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-VRGTVG 471
+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V R +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 472 HIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKKLHQEG 529
+APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++L +EG
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFXRRL-KEG 263
Query: 530 KLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+ D EM Q L C P RP SE+++ L
Sbjct: 264 TRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 14/210 (6%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRN 359
N+ + +G+G F V G VAVK + + +Q EV + + H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TE LV Y G V L HGR AR K + +A + Y H
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSA--VQYCH 131
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ I+HRD+KA N+LLD D + DFG + + T G+ + APE L
Sbjct: 132 QKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC--GSPPYAAPE-LF 185
Query: 480 TGQSSE--KTDVFGFGILLLELITGQRALD 507
G+ + + DV+ G++L L++G D
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 17/229 (7%)
Query: 302 NFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVHR 358
+F ILG G F +V + A+K L K + I +V + T E + +S H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 359 NLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417
++L F ++E+L Y NG L +I + D + L Y
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAPE 476
LH + IIHRD+K NILL+ED + DFG AK+L GT +++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 477 YLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKL 525
L+ + + +D++ G ++ +L+ G L RA N+ G++ + KL
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNE-GLIFAKIIKL 249
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 39/221 (17%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL 360
+F ++G GGFG V+K DG +KR+K YN E EV+ ++ H N+
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK-YNNEKAE----REVKALAKLDHVNI 66
Query: 361 LRLCGFCSTENERLLVYPYMPNGSVASRLRDHIH---------GRPALD-WARRKR---- 406
+ G + Y P S + R + L+ W ++R
Sbjct: 67 VHYNGCWDG-------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 119
Query: 407 ---IAL----GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459
+AL +G+ Y+H + K+I+RD+K +NI L + + +GDFGL L +
Sbjct: 120 DKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 176
Query: 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
+ +GT+ +++PE +S+ ++ D++ G++L EL+
Sbjct: 177 KRXRS--KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 29 AGINYEVVALVAVKNNLHDPYNVLENWDITSVDPCSWRMITCSPDGYVSALGLPSQSLSG 88
AG Y + +K H N+LE I S R+ T +P + S+ G
Sbjct: 568 AGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQ--LNRLSTRNP------CNITSRVYGG 619
Query: 89 TLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDXXXX 148
SP N + + + N + G IP +G + L L+L +N +G IPD +GD
Sbjct: 620 HTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGL 679
Query: 149 XXXXXXXXXXTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-RTF---KVTGNPLICG 204
G P+++S + LT +DLS NNLSG +P++ TF K NP +CG
Sbjct: 680 NILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 739
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 57/122 (46%)
Query: 71 SPDGYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLS 130
+P + L L + +G + P + N ++L S+ L N + G IP+SLG L KL+ L L
Sbjct: 388 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 447
Query: 131 NNKFTGEIPDSLGDXXXXXXXXXXXXXXTGSCPESLSKIESLTLVDLSYNNLSGSLPKIS 190
N GEIP L TG P LS +L + LS N L+G +PK
Sbjct: 448 LNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 507
Query: 191 AR 192
R
Sbjct: 508 GR 509
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
Query: 42 KNNLHDPYNVLENWDITSVDPCSWRMITCSPDGYVSALGLPSQSLSGTLSPWIGNLTKLQ 101
KN L + Y L+N T P + + CS + +L L LSGT+ +G+L+KL+
Sbjct: 390 KNTLQELY--LQNNGFTGKIPPT--LSNCSE---LVSLHLSFNYLSGTIPSSLGSLSKLR 442
Query: 102 SVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDXXXXXXXXXXXXXXTGS 161
+ L N + G IP L ++ L+TL L N TGEIP L + TG
Sbjct: 443 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 502
Query: 162 CPESLSKIESLTLVDLSYNNLSGSLP 187
P+ + ++E+L ++ LS N+ SG++P
Sbjct: 503 IPKWIGRLENLAILKLSNNSFSGNIP 528
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 86 LSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDX 145
L+G + + N T L + L NN + G IP +G+LE L L LSNN F+G IP LGD
Sbjct: 475 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGD- 533
Query: 146 XXXXXXXXXXXXXTGSCPESLSKIESLTLVDLSYNNLSGSLPKISARTFKVTG 198
SL +DL+ N +G++P A FK +G
Sbjct: 534 -----------------------CRSLIWLDLNTNLFNGTIP---AAMFKQSG 560
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 59/136 (43%), Gaps = 28/136 (20%)
Query: 79 LGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEI 138
L + LSG S I T+L+ + + +N +GPIP L+ LQ L L+ NKFTGEI
Sbjct: 225 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEI 282
Query: 139 PDSL-------------------------GDXXXXXXXXXXXXXXTGSCP-ESLSKIESL 172
PD L G +G P ++L K+ L
Sbjct: 283 PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGL 342
Query: 173 TLVDLSYNNLSGSLPK 188
++DLS+N SG LP+
Sbjct: 343 KVLDLSFNEFSGELPE 358
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 28/141 (19%)
Query: 76 VSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPA-SLGKLEKLQTLDLSNNKF 134
++ L L G + P+ G+ + L+S+ L +N G +P +L K+ L+ LDLS N+F
Sbjct: 293 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 352
Query: 135 TGEIPDSLGDXXXXXXXXXXXXXX---------------------------TGSCPESLS 167
+GE+P+SL + TG P +LS
Sbjct: 353 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 412
Query: 168 KIESLTLVDLSYNNLSGSLPK 188
L + LS+N LSG++P
Sbjct: 413 NCSELVSLHLSFNYLSGTIPS 433
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 92 PWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDXXXXXXX 151
P++G+ + LQ + + N + G ++ +L+ L++S+N+F G IP
Sbjct: 214 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYL 271
Query: 152 XXXXXXXTGSCPESLS-KIESLTLVDLSYNNLSGSLP 187
TG P+ LS ++LT +DLS N+ G++P
Sbjct: 272 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 308
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 34 EVVALVAVKNNLHDPYNVLENWDITSVDPCSWRMITCSPDGYVSALGLPSQSLSGTLSP- 92
E+ L++ K+ L D N+L +W ++ +PC++ +TC D V+++ L S+ L+ S
Sbjct: 10 EIHQLISFKDVLPD-KNLLPDWS-SNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAV 66
Query: 93 --WIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDXXXXXX 150
+ +LT L+S+ L N+ I G + + L +LDLS N +G +
Sbjct: 67 SSSLLSLTGLESLFLSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGL 125
Query: 151 XXXXXXXXTGSCPESLS---KIESLTLVDLSYNNLSGS 185
T P +S K+ SL ++DLS N++SG+
Sbjct: 126 KFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGA 163
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGCF----SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G FG V++G + + VA+K K+ +F E T+ H ++++L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
G TEN ++ G + S L+ + +LD A A + L YL +
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK--- 510
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
+ +HRD+ A N+L+ + +GDFGL++ ++ + + + + +APE ++ + +
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 485 EKTDVFGFGILLLELI 500
+DV+ FG+ + E++
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 309 LGRGGFGIVYKGCF---SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCG 365
LG G FG V +G + VA+K LK + E + + + ++RL G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 366 FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK 425
C E L++ M G + + R + + + + G+ YL E+
Sbjct: 78 VCQAEA--LMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEEK---N 130
Query: 426 IIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVT--TAVRGTVGHIAPEYLSTGQS 483
+HRD+ A N+LL A + DFGL+K L DS+ T +A + + APE ++ +
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 484 SEKTDVFGFGILLLELIT-GQR 504
S ++DV+ +G+ + E ++ GQ+
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQK 212
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 14/210 (6%)
Query: 302 NFSAKNILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRN 359
N+ +G+G F V G VAVK + + +Q EV + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TE LV Y G V L HGR AR K + +A + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLV--AHGRXKEKEARAKFRQIVSA--VQYCH 130
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ I+HRD+KA N+LLD D + DFG + + A G + APE L
Sbjct: 131 QKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPE-LF 184
Query: 480 TGQSSE--KTDVFGFGILLLELITGQRALD 507
G+ + + DV+ G++L L++G D
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 24/210 (11%)
Query: 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGG-EVQFQTEVETISLAVHRNL 360
+F + LG G G+V K L+ ++L I Q E++ + +
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 361 LRLCGFCSTENERLLVYPYMPNGSV------ASRLRDHIHGRPALDWARRKRIALGTARG 414
+ G ++ E + +M GS+ A R+ + I G+ +++ RG
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGK----------VSIAVLRG 126
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA-KLLDHRDSHVTTAVRGTVGHI 473
L YL E+ +I+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 127 LAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYM 180
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L S ++D++ G+ L+EL G+
Sbjct: 181 APERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGCF----SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G FG V++G + + VA+K K+ +F E T+ H ++++L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
G TEN ++ G + S L+ + +LD A A + L YL +
Sbjct: 78 GVI-TENPVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK--- 130
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
+ +HRD+ A N+L+ +GDFGL++ ++ + + + + +APE ++ + +
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 485 EKTDVFGFGILLLELI 500
+DV+ FG+ + E++
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 32/212 (15%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
+G+G +G V+ G + G VAVK + +TE+ L H N+L GF +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVF--FTTEEASWFRETEIYQTVLMRHENIL---GFIA 98
Query: 369 TE-------NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE- 420
+ + L+ Y NGS+ L+ LD ++A + GL +LH
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTE 153
Query: 421 ----QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK--LLDHRDSHVTTAVR-GTVGHI 473
Q P I HRD+K+ NIL+ ++ + D GLA + D + + R GT ++
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYM 213
Query: 474 APEYLSTG------QSSEKTDVFGFGILLLEL 499
PE L QS D++ FG++L E+
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 39/287 (13%)
Query: 309 LGRGGFG-IVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVET-ISLAVHRNLL 361
LGRG FG ++ F + VAVK LK+ +E++ I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 362 RLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHG--------RPALDWARRKRIALGTA 412
L G C+ L+V + G++++ LR + + L + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-VRGTVG 471
+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V R +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 472 HIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKKLHQEG 529
+APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++L +EG
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRRL-KEG 263
Query: 530 KLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+ D EM Q L C P RP SE+++ L
Sbjct: 264 TRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 18/218 (8%)
Query: 297 RAATSNFSAKNILGRGGFGIVY----KGCFSDGALVAVKRLK-DYNIAGGEVQF-QTEVE 350
R ++F+ +LG+G FG V KG L AVK LK D I +V+ E
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGT---DELYAVKILKKDVVIQDDDVECTMVEKR 72
Query: 351 TISLAVHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
++L L C +RL V Y+ G L HI A
Sbjct: 73 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGD----LMYHIQQVGRFKEPHAVFYAA 128
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT 469
A GL +L + II+RD+K N++LD + + DFG+ K + D T GT
Sbjct: 129 EIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGT 184
Query: 470 VGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507
+IAPE ++ + D + FG+LL E++ GQ +
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 309 LGRGGFGIV--YKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG GGF V +G DG A+KR+ + E + Q E + L H N+LRL +
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDRE-EAQREADMHRLFNHPNILRLVAY 94
Query: 367 CSTE----NERLLVYPYMPNGSV---ASRLRD--HIHGRPALDWARRKRIALGTARGLLY 417
C E +E L+ P+ G++ RL+D + + W + LG RGL
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW-----LLLGICRGLEA 149
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVT-----------TAV 466
+H + HRD+K NILL ++ + V+ D G ++ HV A
Sbjct: 150 IHAK---GYAHRDLKPTNILLGDEGQPVLMDLG---SMNQACIHVEGSRQALTLQDWAAQ 203
Query: 467 RGTVGHIAPEYLSTGQS---SEKTDVFGFGILLLELITGQRALDF 508
R T+ + APE S E+TDV+ G +L ++ G+ D
Sbjct: 204 RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 302 NFSAKNILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRN 359
N+ +G+G F V G VAV+ + + +Q EV + + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TE LV Y G V L HGR AR K + +A + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSA--VQYCH 130
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ I+HRD+KA N+LLD D + DFG + + G+ + APE L
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPE-LF 184
Query: 480 TGQSSE--KTDVFGFGILLLELITGQRALD 507
G+ + + DV+ G++L L++G D
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 29 AGINYEVVALVAVKNNLHDPYNVLENWDITSVDPCSWRMITCSPDGYVSALGLPSQSLSG 88
AG Y + +K H N+LE I S R+ T +P + S+ G
Sbjct: 571 AGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQ--LNRLSTRNP------CNITSRVYGG 622
Query: 89 TLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDXXXX 148
SP N + + + N + G IP +G + L L+L +N +G IPD +GD
Sbjct: 623 HTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGL 682
Query: 149 XXXXXXXXXXTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-RTF---KVTGNPLICG 204
G P+++S + LT +DLS NNLSG +P++ TF K NP +CG
Sbjct: 683 NILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 742
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 57/122 (46%)
Query: 71 SPDGYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLS 130
+P + L L + +G + P + N ++L S+ L N + G IP+SLG L KL+ L L
Sbjct: 391 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 450
Query: 131 NNKFTGEIPDSLGDXXXXXXXXXXXXXXTGSCPESLSKIESLTLVDLSYNNLSGSLPKIS 190
N GEIP L TG P LS +L + LS N L+G +PK
Sbjct: 451 LNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 510
Query: 191 AR 192
R
Sbjct: 511 GR 512
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
Query: 42 KNNLHDPYNVLENWDITSVDPCSWRMITCSPDGYVSALGLPSQSLSGTLSPWIGNLTKLQ 101
KN L + Y L+N T P + + CS + +L L LSGT+ +G+L+KL+
Sbjct: 393 KNTLQELY--LQNNGFTGKIPPT--LSNCS---ELVSLHLSFNYLSGTIPSSLGSLSKLR 445
Query: 102 SVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDXXXXXXXXXXXXXXTGS 161
+ L N + G IP L ++ L+TL L N TGEIP L + TG
Sbjct: 446 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 505
Query: 162 CPESLSKIESLTLVDLSYNNLSGSLP 187
P+ + ++E+L ++ LS N+ SG++P
Sbjct: 506 IPKWIGRLENLAILKLSNNSFSGNIP 531
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 86 LSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDX 145
L+G + + N T L + L NN + G IP +G+LE L L LSNN F+G IP LGD
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGD- 536
Query: 146 XXXXXXXXXXXXXTGSCPESLSKIESLTLVDLSYNNLSGSLPKISARTFKVTG 198
SL +DL+ N +G++P A FK +G
Sbjct: 537 -----------------------CRSLIWLDLNTNLFNGTIP---AAMFKQSG 563
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 59/136 (43%), Gaps = 28/136 (20%)
Query: 79 LGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEI 138
L + LSG S I T+L+ + + +N +GPIP L+ LQ L L+ NKFTGEI
Sbjct: 228 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEI 285
Query: 139 PDSL-------------------------GDXXXXXXXXXXXXXXTGSCP-ESLSKIESL 172
PD L G +G P ++L K+ L
Sbjct: 286 PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGL 345
Query: 173 TLVDLSYNNLSGSLPK 188
++DLS+N SG LP+
Sbjct: 346 KVLDLSFNEFSGELPE 361
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 28/141 (19%)
Query: 76 VSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPA-SLGKLEKLQTLDLSNNKF 134
++ L L G + P+ G+ + L+S+ L +N G +P +L K+ L+ LDLS N+F
Sbjct: 296 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355
Query: 135 TGEIPDSLGDXXXXXXXXXXXXXX---------------------------TGSCPESLS 167
+GE+P+SL + TG P +LS
Sbjct: 356 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 415
Query: 168 KIESLTLVDLSYNNLSGSLPK 188
L + LS+N LSG++P
Sbjct: 416 NCSELVSLHLSFNYLSGTIPS 436
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 92 PWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDXXXXXXX 151
P++G+ + LQ + + N + G ++ +L+ L++S+N+F G IP
Sbjct: 217 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYL 274
Query: 152 XXXXXXXTGSCPESLS-KIESLTLVDLSYNNLSGSLP 187
TG P+ LS ++LT +DLS N+ G++P
Sbjct: 275 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 34 EVVALVAVKNNLHDPYNVLENWDITSVDPCSWRMITCSPDGYVSALGLPSQSLSGTLSP- 92
E+ L++ K+ L D N+L +W ++ +PC++ +TC D V+++ L S+ L+ S
Sbjct: 13 EIHQLISFKDVLPD-KNLLPDWS-SNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAV 69
Query: 93 --WIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDXXXXXX 150
+ +LT L+S+ L N+ I G + + L +LDLS N +G +
Sbjct: 70 SSSLLSLTGLESLFLSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGL 128
Query: 151 XXXXXXXXTGSCPESLS---KIESLTLVDLSYNNLSGS 185
T P +S K+ SL ++DLS N++SG+
Sbjct: 129 KFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGA 166
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 302 NFSAKNILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRN 359
N+ +G+G F V G VA+K + + +Q EV + + H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TE L+ Y G V L HGR AR K + +A + Y H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKFRQIVSA--VQYCH 131
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ +I+HRD+KA N+LLD D + DFG + + A G + APE L
Sbjct: 132 QK---RIVHRDLKAENLLLDADMNIKIADFGFSN--EFTVGGKLDAFCGAPPYAAPE-LF 185
Query: 480 TGQSSE--KTDVFGFGILLLELITGQRALD 507
G+ + + DV+ G++L L++G D
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 16/228 (7%)
Query: 301 SNFSAKNILGRGGFGI-VYKGCFSDGALVAVKRL-KDYNIAGGEVQFQT-EVETISLAVH 357
+F ILG G F V + A+K L K + I +V + T E + +S H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 358 RNLLRLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
++L F ++E+L Y NG L +I + D + L
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGE----LLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAP 475
YLH + IIHRD+K NILL+ED + DFG AK+L GT +++P
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
E L+ + + +D++ G ++ +L+ G L RA N+ + +K
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLIFQKIIK 246
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 309 LGRGGFG-IVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVET-ISLAVHRNLL 361
LGRG FG ++ F + VAVK LK+ +E++ I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 362 RLCGFCSTENERLLV-YPYMPNGSVASRLR----DHIHGRPALDWARRKRIAL------- 409
L G C+ L+V + G++++ LR + + + A + + + L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 410 -GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-VR 467
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V R
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKKL 525
+ +APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++L
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRRL 266
Query: 526 HQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+EG + D EM Q L C P RP SE+++ L
Sbjct: 267 -KEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 309 LGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LG G + VYKG +D LVA+K ++ + G EV + H N++ L
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
TE LV+ Y+ + + L D ++ K RGL Y H Q K+
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDD---CGNIINMHNVKLFLFQLLRGLAYCHRQ---KV 121
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRG----TVGHIAPE-YLSTG 481
+HRD+K N+L++E E + DFGLA R + T T+ + P+ L +
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLA-----RAKSIPTKTYDNEVVTLWYRPPDILLGST 176
Query: 482 QSSEKTDVFGFGILLLELITGQ 503
S + D++G G + E+ TG+
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGR 198
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 123/275 (44%), Gaps = 55/275 (20%)
Query: 305 AKNILGRGGFG-IVYKGCFSDGALVAVKR-LKDY-NIAGGEVQFQTEVETISLAVHRNLL 361
++ ILG G G +V++G F G VAVKR L D+ +IA E++ TE + H N++
Sbjct: 37 SEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDD-----HPNVI 90
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKR-----IAL--GTARG 414
R +CS +R L Y+ L+D + + D + + I+L A G
Sbjct: 91 RY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 415 LLYLHEQCDPKIIHRDVKAANILLD-------------EDFEAVVGDFGLAKLLDHRDSH 461
+ +LH KIIHRD+K NIL+ E+ ++ DFGL K LD
Sbjct: 146 VAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 462 VTTAVR---GTVGHIAPEYLSTGQSSEKT---DVFGFGILLLELIT-GQRAL--DFGRAA 512
+ GT G APE L T D+F G + +++ G+ + R +
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 262
Query: 513 N-QRGVM-LDWVKKLHQEG-------KLSQMVDKD 538
N RG+ LD +K LH +SQM+D D
Sbjct: 263 NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD 297
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 36/214 (16%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV--HRNLLRLCGF 366
+G+G FG V++G + G VAVK E + E E + H N+L GF
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENIL---GF 62
Query: 367 CSTEN-------ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+ +N + LV Y +GS+ L R + ++AL TA GL +LH
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 117
Query: 420 -----EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVG--- 471
Q P I HRD+K+ NIL+ ++ + D GLA D + A VG
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 472 HIAPEYLSTG------QSSEKTDVFGFGILLLEL 499
++APE L +S ++ D++ G++ E+
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Query: 296 LRAATSNFSAKNILGRGGFGIV----YKGCFSDGALVAVKRLKDYNIA--GGEVQFQTEV 349
L+ ++ ++GRG FG V +K + + A+K L + + F E
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHK---ASQKVYAMKLLSKFEMIKRSDSAFFWEER 126
Query: 350 ETISLAVHRNLLRLCGFCSTENERLL--VYPYMPNGSVASRLRDHIHGRPALDWARRKRI 407
+ ++ A +++L FC+ ++++ L V YMP G + + + ++ WA+
Sbjct: 127 DIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNY---DVPEKWAK---- 177
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDS-HVTTAV 466
TA +L L +IHRDVK N+LLD+ + DFG +D H TAV
Sbjct: 178 -FYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV 236
Query: 467 RGTVGHIAPEYLST----GQSSEKTDVFGFGILLLELITG 502
GT +I+PE L + G + D + G+ L E++ G
Sbjct: 237 -GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 123/275 (44%), Gaps = 55/275 (20%)
Query: 305 AKNILGRGGFG-IVYKGCFSDGALVAVKR-LKDY-NIAGGEVQFQTEVETISLAVHRNLL 361
++ ILG G G +V++G F G VAVKR L D+ +IA E++ TE + H N++
Sbjct: 37 SEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDD-----HPNVI 90
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKR-----IAL--GTARG 414
R +CS +R L Y+ L+D + + D + + I+L A G
Sbjct: 91 RY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 415 LLYLHEQCDPKIIHRDVKAANILLD-------------EDFEAVVGDFGLAKLLDHRDSH 461
+ +LH KIIHRD+K NIL+ E+ ++ DFGL K LD
Sbjct: 146 VAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 462 VTTAVR---GTVGHIAPEYLSTGQSSEKT---DVFGFGILLLELIT-GQRAL--DFGRAA 512
+ GT G APE L T D+F G + +++ G+ + R +
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 262
Query: 513 N-QRGVM-LDWVKKLHQEG-------KLSQMVDKD 538
N RG+ LD +K LH +SQM+D D
Sbjct: 263 NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD 297
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 303 FSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
F LG G +G VYK + G +VA+K++ + + E+ + +++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP---VESDLQEIIKEISIMQQCDSPHVV 87
Query: 362 RLCGFCSTENERLLVYPYMPNGSVAS--RLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+ G + +V Y GSV+ RLR+ L I T +GL YLH
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK-----TLTEDEIATILQSTLKGLEYLH 142
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
+ IHRD+KA NILL+ + A + DFG+A L + + GT +APE +
Sbjct: 143 FM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI-GTPFWMAPEVIQ 198
Query: 480 TGQSSEKTDVFGFGILLLELITGQ 503
+ D++ GI +E+ G+
Sbjct: 199 EIGYNCVADIWSLGITAIEMAEGK 222
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 36/214 (16%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV--HRNLLRLCGF 366
+G+G FG V++G + G VAVK E + E E + H N+L GF
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENIL---GF 101
Query: 367 CSTEN-------ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+ +N + LV Y +GS+ L R + ++AL TA GL +LH
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 156
Query: 420 -----EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVG--- 471
Q P I HRD+K+ NIL+ ++ + D GLA D + A VG
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 216
Query: 472 HIAPEYLSTG------QSSEKTDVFGFGILLLEL 499
++APE L +S ++ D++ G++ E+
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 309 LGRGGFG-IVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVET-ISLAVHRNLL 361
LGRG FG ++ F + VAVK LK+ +E++ I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 362 RLCGFCSTENERLLV-YPYMPNGSVASRLR----DHIHGRPALDWARRKRIAL------- 409
L G C+ L+V + G++++ LR + + + A + + + L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 410 -GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-VR 467
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKKL 525
+ +APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++L
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRRL 264
Query: 526 HQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+EG + D EM Q L C P RP SE+++ L
Sbjct: 265 -KEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 124/279 (44%), Gaps = 59/279 (21%)
Query: 305 AKNILGRGGFG-IVYKGCFSDGALVAVKR-LKDY-NIAGGEVQFQTEVETISLAVHRNLL 361
++ ILG G G +V++G F G VAVKR L D+ +IA E++ TE + H N++
Sbjct: 19 SEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDD-----HPNVI 72
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKR-----IAL--GTARG 414
R +CS +R L Y+ L+D + + D + + I+L A G
Sbjct: 73 RY--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 415 LLYLHEQCDPKIIHRDVKAANILLD-------------EDFEAVVGDFGLAKLLDHRDSH 461
+ +LH KIIHRD+K NIL+ E+ ++ DFGL K LD
Sbjct: 128 VAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 184
Query: 462 VTTAVR---GTVGHIAPEYLSTGQS-------SEKTDVFGFGILLLELIT-GQRAL--DF 508
+ GT G APE L + + D+F G + +++ G+ +
Sbjct: 185 FRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244
Query: 509 GRAAN-QRGVM-LDWVKKLHQEG-------KLSQMVDKD 538
R +N RG+ LD +K LH +SQM+D D
Sbjct: 245 SRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD 283
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGCF----SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G FG V++G + + VA+K K+ +F E T+ H ++++L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
G TEN ++ G + S L+ + +LD A A + L YL +
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK--- 510
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
+ +HRD+ A N+L+ +GDFGL++ ++ + + + + +APE ++ + +
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 485 EKTDVFGFGILLLELI 500
+DV+ FG+ + E++
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 18/218 (8%)
Query: 297 RAATSNFSAKNILGRGGFGIVY----KGCFSDGALVAVKRLK-DYNIAGGEVQF-QTEVE 350
R ++F+ +LG+G FG V KG L AVK LK D I +V+ E
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGT---DELYAVKILKKDVVIQDDDVECTMVEKR 393
Query: 351 TISLAVHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
++L L C +RL V Y+ G L HI A
Sbjct: 394 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGD----LMYHIQQVGRFKEPHAVFYAA 449
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT 469
A GL +L + II+RD+K N++LD + + DFG+ K + D T GT
Sbjct: 450 EIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGT 505
Query: 470 VGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507
+IAPE ++ + D + FG+LL E++ GQ +
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 300 TSNFSAKNILGRGGFG--IVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV- 356
+ + + +LG+G FG I+ K + G AVK I+ +V+ +T+ E++ V
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKV-----ISKRQVKQKTDKESLLREVQ 78
Query: 357 ------HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
H N+++L F + LV G L D I R RI
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE----LFDEIISRKRFSEVDAARIIRQ 134
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTTAVR 467
G+ Y+H+ KI+HRD+K N+LL+ +D + DFGL+ + S
Sbjct: 135 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKI 189
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
GT +IAPE L G EK DV+ G++L L++G
Sbjct: 190 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 36/214 (16%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV--HRNLLRLCGF 366
+G+G FG V++G + G VAVK E + E E + H N+L GF
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENIL---GF 63
Query: 367 CSTEN-------ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+ +N + LV Y +GS+ L R + ++AL TA GL +LH
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 118
Query: 420 -----EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVG--- 471
Q P I HRD+K+ NIL+ ++ + D GLA D + A VG
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 178
Query: 472 HIAPEYLSTG------QSSEKTDVFGFGILLLEL 499
++APE L +S ++ D++ G++ E+
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 36/214 (16%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV--HRNLLRLCGF 366
+G+G FG V++G + G VAVK E + E E + H N+L GF
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENIL---GF 68
Query: 367 CSTEN-------ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+ +N + LV Y +GS+ L R + ++AL TA GL +LH
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 123
Query: 420 -----EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVG--- 471
Q P I HRD+K+ NIL+ ++ + D GLA D + A VG
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 183
Query: 472 HIAPEYLSTG------QSSEKTDVFGFGILLLEL 499
++APE L +S ++ D++ G++ E+
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 36/214 (16%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV--HRNLLRLCGF 366
+G+G FG V++G + G VAVK E + E E + H N+L GF
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENIL---GF 65
Query: 367 CSTEN-------ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+ +N + LV Y +GS+ L R + ++AL TA GL +LH
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 120
Query: 420 -----EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVG--- 471
Q P I HRD+K+ NIL+ ++ + D GLA D + A VG
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 180
Query: 472 HIAPEYLSTG------QSSEKTDVFGFGILLLEL 499
++APE L +S ++ D++ G++ E+
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 302 NFSAKNILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRN 359
N+ +G+G F V G VA+K + + +Q EV + + H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TE L+ Y G V L HGR AR K + +A + Y H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKFRQIVSA--VQYCH 128
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
++ +I+HRD+KA N+LLD D + DFG + T G+ + APE L
Sbjct: 129 QK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC--GSPPYAAPE-LF 182
Query: 480 TGQSSE--KTDVFGFGILLLELITGQRALD 507
G+ + + DV+ G++L L++G D
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 300 TSNFSAKNILGRGGFG--IVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV- 356
+ + + +LG+G FG I+ K + G AVK I+ +V+ +T+ E++ V
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVK-----VISKRQVKQKTDKESLLREVQ 84
Query: 357 ------HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
H N+++L F + LV G L D I R RI
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE----LFDEIISRKRFSEVDAARIIRQ 140
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTTAVR 467
G+ Y+H+ KI+HRD+K N+LL+ +D + DFGL+ + S
Sbjct: 141 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKI 195
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
GT +IAPE L G EK DV+ G++L L++G
Sbjct: 196 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 36/214 (16%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV--HRNLLRLCGF 366
+G+G FG V++G + G VAVK E + E E + H N+L GF
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENIL---GF 88
Query: 367 CSTEN-------ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+ +N + LV Y +GS+ L R + ++AL TA GL +LH
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 143
Query: 420 -----EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVG--- 471
Q P I HRD+K+ NIL+ ++ + D GLA D + A VG
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 203
Query: 472 HIAPEYLSTG------QSSEKTDVFGFGILLLEL 499
++APE L +S ++ D++ G++ E+
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 273 FDVNDQYDPE-VSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAV 330
FD+ QY P+ V + H ++ LG G FG+V++ + G A
Sbjct: 31 FDIWKQYYPQPVEIKH---------DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAA 81
Query: 331 KRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLR 390
K + + + E + E++T+S+ H L+ L +NE +++Y +M G + ++
Sbjct: 82 KFVMTPHESDKET-VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVA 140
Query: 391 DHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL--DEDFEAVVGD 448
D H + + D A +GL ++HE +H D+K NI+ E + D
Sbjct: 141 DE-HNKMSEDEA--VEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLID 194
Query: 449 FGLAKLLDHRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
FGL LD + S VTT GT APE TD++ G+L L++G
Sbjct: 195 FGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 30/238 (12%)
Query: 273 FDVNDQYDPE-VSLGH---LKRYTFKELRAATSNFSAKNILGRGGFGIVYKGC-FSDGAL 327
FD+ QY P+ V + H L Y E LG G FG+V++ + G
Sbjct: 137 FDIWKQYYPQPVEIKHDHVLDHYDIHEE------------LGTGAFGVVHRVTERATGNN 184
Query: 328 VAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVAS 387
A K + + + E + E++T+S+ H L+ L +NE +++Y +M G +
Sbjct: 185 FAAKFVMTPHESDKET-VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE 243
Query: 388 RLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL--DEDFEAV 445
++ D H + + D A +GL ++HE +H D+K NI+ E
Sbjct: 244 KVADE-HNKMSEDEA--VEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELK 297
Query: 446 VGDFGLAKLLDHRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+ DFGL LD + S VTT GT APE TD++ G+L L++G
Sbjct: 298 LIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 309 LGRGGFG-IVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVET-ISLAVHRNLL 361
LGRG FG ++ F + VAVK LK+ +E++ I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 362 RLCGFCSTENERLLVY-PYMPNGSVASRLR----DHIHGRPALDWARRKRIAL------- 409
L G C+ L+V + G++++ LR + + + A + + + L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 410 -GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-VR 467
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKKL 525
+ +APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++L
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRRL 255
Query: 526 HQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+EG + D EM Q L C P RP SE+++ L
Sbjct: 256 -KEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 309 LGRGGFG-IVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVET-ISLAVHRNLL 361
LGRG FG ++ F + VAVK LK+ +E++ I + H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 362 RLCGFCSTENERLLV-YPYMPNGSVASRLR----DHIHGRPALDWARRKRIAL------- 409
L G C+ L+V + G++++ LR + + + A + + + L
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 410 -GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-VR 467
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V R
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKKL 525
+ +APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++L
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRRL 301
Query: 526 HQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+EG + D EM Q L C P RP SE+++ L
Sbjct: 302 -KEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 43/291 (14%)
Query: 309 LGRGGFG-IVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVET-ISLAVHRNLL 361
LGRG FG ++ F + VAVK LK+ +E++ I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 362 RLCGFCSTENERLLVY-PYMPNGSVASRLR----DHIHGRPALDWARRKRIAL------- 409
L G C+ L+V + G++++ LR + + + A + + + L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 410 -GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-VR 467
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKKL 525
+ +APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++L
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRRL 255
Query: 526 HQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+EG + D EM Q L C P RP SE+++ L
Sbjct: 256 -KEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 43/291 (14%)
Query: 309 LGRGGFG-IVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVET-ISLAVHRNLL 361
LGRG FG ++ F + VAVK LK+ +E++ I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 362 RLCGFCSTENERLLV-YPYMPNGSVASRLR----DHIHGRPALDWARRKRIAL------- 409
L G C+ L+V + G++++ LR + + + A + + + L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 410 -GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-VR 467
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKKL 525
+ +APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++L
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRRL 264
Query: 526 HQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+EG + D EM Q L C P RP SE+++ L
Sbjct: 265 -KEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 389 LRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGD 448
LRD +H + R + + L + H+ IIHRDVK ANIL+ V D
Sbjct: 103 LRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANILISATNAVKVVD 159
Query: 449 FGLAKLLDHRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
FG+A+ + + V T AV GT +++PE ++DV+ G +L E++TG+
Sbjct: 160 FGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 125/290 (43%), Gaps = 42/290 (14%)
Query: 309 LGRGGFG-IVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVET-ISLAVHRNLL 361
LGRG FG ++ F + VAVK LK+ +E++ I + H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 362 RLCGFCSTENERLLV-YPYMPNGSVASRLRDHIHG-----------RPALDWARRKRIAL 409
L G C+ L+V + G++++ LR + + L +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-VRG 468
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + V R
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 469 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKKLH 526
+ +APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++L
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRRL- 264
Query: 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+EG + D EM Q L C P RP SE+++ L
Sbjct: 265 KEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 389 LRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGD 448
LRD +H + R + + L + H+ IIHRDVK ANI++ V D
Sbjct: 103 LRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMD 159
Query: 449 FGLAKLLDHRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
FG+A+ + + V T AV GT +++PE ++DV+ G +L E++TG+
Sbjct: 160 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 300 TSNFSAKNILGRGGFG--IVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV- 356
+ + + +LG+G FG I+ K + G AVK I+ +V+ +T+ E++ V
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKV-----ISKRQVKQKTDKESLLREVQ 102
Query: 357 ------HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
H N+++L F + LV G L D I R RI
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE----LFDEIISRKRFSEVDAARIIRQ 158
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTTAVR 467
G+ Y+H+ KI+HRD+K N+LL+ +D + DFGL+ + S
Sbjct: 159 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKI 213
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
GT +IAPE L G EK DV+ G++L L++G
Sbjct: 214 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 43/291 (14%)
Query: 309 LGRGGFG-IVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVET-ISLAVHRNLL 361
LGRG FG ++ F + VAVK LK+ +E++ I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 362 RLCGFCSTENERLLVY-PYMPNGSVASRLR----DHIHGRPALDWARRKRIAL------- 409
L G C+ L+V + G++++ LR + + + A + + + L
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 410 -GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-VR 467
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKKL 525
+ +APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++L
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRRL 255
Query: 526 HQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+EG + D EM Q L C P RP SE+++ L
Sbjct: 256 -KEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 389 LRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGD 448
LRD +H + R + + L + H+ IIHRDVK ANI++ V D
Sbjct: 103 LRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMD 159
Query: 449 FGLAKLLDHRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
FG+A+ + + V T AV GT +++PE ++DV+ G +L E++TG+
Sbjct: 160 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 300 TSNFSAKNILGRGGFG--IVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV- 356
+ + + +LG+G FG I+ K + G AVK I+ +V+ +T+ E++ V
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKV-----ISKRQVKQKTDKESLLREVQ 101
Query: 357 ------HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
H N+++L F + LV G L D I R RI
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE----LFDEIISRKRFSEVDAARIIRQ 157
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTTAVR 467
G+ Y+H+ KI+HRD+K N+LL+ +D + DFGL+ + S
Sbjct: 158 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKI 212
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
GT +IAPE L G EK DV+ G++L L++G
Sbjct: 213 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 35/232 (15%)
Query: 309 LGRGGFGIVYKGC-FSDGALVAVKRLKD--YNIAGGEVQFQTEVETISLAVHRNLLRLCG 365
LG+G +GIV+K G +VAVK++ D N + F+ + L+ H N++ L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 366 FCSTENER--LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCD 423
+N+R LV+ YM + + +R +I L+ ++ + + + YLH
Sbjct: 77 VLRADNDRDVYLVFDYM-ETDLHAVIRANI-----LEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 424 PKIIHRDVKAANILLDEDFEAVVGDFGLAK-LLDHR-------------------DSHVT 463
++HRD+K +NILL+ + V DFGL++ ++ R D +
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 464 TAVRGTVGHIAPEY-LSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ 514
T T + APE L + + ++ D++ G +L E++ G+ NQ
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 389 LRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGD 448
LRD +H + R + + L + H+ IIHRDVK ANI++ V D
Sbjct: 103 LRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMD 159
Query: 449 FGLAKLLDHRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
FG+A+ + + V T AV GT +++PE ++DV+ G +L E++TG+
Sbjct: 160 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 43/291 (14%)
Query: 309 LGRGGFG-IVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVET-ISLAVHRNLL 361
LGRG FG ++ F + VAVK LK+ +E++ I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 362 RLCGFCSTENERLLV-YPYMPNGSVASRLR----DHIHGRPALDWARRKRIAL------- 409
L G C+ L+V + G++++ LR + + + A + + + L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 410 -GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK-LLDHRDSHVTTAVR 467
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + D R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKKL 525
+ +APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++L
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRRL 264
Query: 526 HQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+EG + D EM Q L C P RP SE+++ L
Sbjct: 265 -KEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 309 LGRGGFGIVYKGCF---SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCG 365
LG G FG V +G + VA+K LK + E + + + ++RL G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 366 FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK 425
C E L++ M G + + R + + + + G+ YL E+
Sbjct: 404 VCQAEA--LMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEEK---N 456
Query: 426 IIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVT--TAVRGTVGHIAPEYLSTGQS 483
+HR++ A N+LL A + DFGL+K L DS+ T +A + + APE ++ +
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 484 SEKTDVFGFGILLLELIT-GQR 504
S ++DV+ +G+ + E ++ GQ+
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQK 538
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 389 LRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGD 448
LRD +H + R + + L + H+ IIHRDVK ANI++ V D
Sbjct: 103 LRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMD 159
Query: 449 FGLAKLLDHRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
FG+A+ + + V T AV GT +++PE ++DV+ G +L E++TG+
Sbjct: 160 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 43/291 (14%)
Query: 309 LGRGGFG-IVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVET-ISLAVHRNLL 361
LGRG FG ++ F + VAVK LK+ +E++ I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 362 RLCGFCSTENERLLV-YPYMPNGSVASRLR----DHIHGRPALDWARRKRIAL------- 409
L G C+ L+V + G++++ LR + + + A + + + L
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 410 -GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-VR 467
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKKL 525
+ +APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++L
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRRL 255
Query: 526 HQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+EG + D EM Q L C P RP SE+++ L
Sbjct: 256 -KEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 45/294 (15%)
Query: 293 FKELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVET 351
FK+L NF K L G ++KG + + +V V +++D++ F E
Sbjct: 9 FKQL-----NFLTK--LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSR-DFNEECPR 60
Query: 352 ISLAVHRNLLRLCGFCSTEN--ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ + H N+L + G C + L+ +MP GS+ + L + + +D ++ + AL
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF--VVDQSQAVKFAL 118
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT 469
ARG+ +LH +P I + + ++++DED A + + D + S +
Sbjct: 119 DMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARIS------MADVKFSFQSPGRMYA 171
Query: 470 VGHIAPEYLST---GQSSEKTDVFGFGILLLELITGQRALDFGRAANQR---GVMLDWVK 523
+APE L + D++ F +LL EL+T R + F +N V L+ ++
Sbjct: 172 PAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT--REVPFADLSNMEIGMKVALEGLR 229
Query: 524 KLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577
G +S V K +K +C +P RPK ++ +LE
Sbjct: 230 PTIPPG-ISPHVSKLMK----------------ICMNEDPAKRPKFDMIVPILE 266
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 106/235 (45%), Gaps = 41/235 (17%)
Query: 296 LRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISL 354
LR A S+F +LG+G FG V K + D A+K+++ + +EV ++
Sbjct: 2 LRYA-SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL--SEVXLLAS 58
Query: 355 AVHRNLLRLCGFCSTENERLLVYP----------YMPNGSVASR-LRDHIHGRPALDWAR 403
H+ ++R + + R V P ++ +R L D IH L+ R
Sbjct: 59 LNHQYVVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE-NLNQQR 115
Query: 404 RK--RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR--- 458
+ R+ L Y+H Q IIHR++K NI +DE +GDFGLAK + HR
Sbjct: 116 DEYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNV-HRSLD 171
Query: 459 ------------DSHVTTAVRGTVGHIAPEYLS-TGQSSEKTDVFGFGILLLELI 500
++T+A+ GT ++A E L TG +EK D + GI+ E I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 389 LRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGD 448
LRD +H + R + + L + H+ IIHRDVK ANI++ V D
Sbjct: 120 LRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMD 176
Query: 449 FGLAKLLDHRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
FG+A+ + + V T AV GT +++PE ++DV+ G +L E++TG+
Sbjct: 177 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHR 358
+S+F K++LG G +G+V G +VA+K+++ ++ ++ E++ + H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 359 NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYL 418
N++ + ++ Y+ + + L I + L + T R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVL 128
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR---DSHVTTAVRGTVGHI-- 473
H +IHRD+K +N+L++ + + V DFGLA+++D +S T G V +
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 474 ----APE-YLSTGQSSEKTDVFGFGILLLELI 500
APE L++ + S DV+ G +L EL
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 118
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ T V T+ + APE
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 174
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRN 359
NF +G G +G+VYK G +VA+K+++ D G E+ + H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TEN+ LV+ ++ + G P K +GL + H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 127
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE-YL 478
+++HRD+K N+L++ + + DFGLA+ T V T+ + APE L
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 479 STGQSSEKTDVFGFGILLLELITGQRAL 506
S D++ G + E++T +RAL
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRN 359
NF +G G +G+VYK G +VA+K+++ D G E+ + H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TEN+ LV+ ++ + G P K +GL + H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 127
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE-YL 478
+++HRD+K N+L++ + + DFGLA+ T V T+ + APE L
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 479 STGQSSEKTDVFGFGILLLELITGQRAL 506
S D++ G + E++T +RAL
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRN 359
NF +G G +G+VYK G +VA+K+++ D G E+ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TEN+ LV+ ++ + G P K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 120
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE-YL 478
+++HRD+K N+L++ + + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 479 STGQSSEKTDVFGFGILLLELITGQRAL 506
S D++ G + E++T +RAL
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRN 359
NF +G G +G+VYK G +VA+K+++ D G E+ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TEN+ LV+ ++ + G P K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 119
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE-YL 478
+++HRD+K N+L++ + + DFGLA+ T V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 175
Query: 479 STGQSSEKTDVFGFGILLLELITGQRAL 506
S D++ G + E++T +RAL
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRN 359
NF +G G +G+VYK G +VA+K+++ D G E+ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TEN+ LV+ ++ + G P K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 120
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE-YL 478
+++HRD+K N+L++ + + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 479 STGQSSEKTDVFGFGILLLELITGQRAL 506
S D++ G + E++T +RAL
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHR 358
NF +G G +G+VYK G +VA+K+++ D G E+ + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 359 NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYL 418
N+++L TEN+ LV+ ++ + G P K +GL +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFC 123
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE-Y 477
H +++HRD+K N+L++ + + DFGLA+ T V T+ + APE
Sbjct: 124 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEIL 179
Query: 478 LSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRN 359
NF +G G +G+VYK G +VA+K+++ D G E+ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TEN+ LV+ ++ + G P K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 120
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE-YL 478
+++HRD+K N+L++ + + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 479 STGQSSEKTDVFGFGILLLELITGQRAL 506
S D++ G + E++T +RAL
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRN 359
NF +G G +G+VYK G +VA+K+++ D G E+ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TEN+ LV+ ++ + G P K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 119
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE-YL 478
+++HRD+K N+L++ + + DFGLA+ T V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 175
Query: 479 STGQSSEKTDVFGFGILLLELITGQRAL 506
S D++ G + E++T +RAL
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 109/253 (43%), Gaps = 24/253 (9%)
Query: 309 LGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
+G G GIV S G LVAVK++ E+ F EV + H N++ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 217
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
+E +V ++ G++ + H R ++ + + L + L LH Q +I
Sbjct: 218 LVGDELWVVMEFLEGGALTDIV---THTR--MNEEQIAAVCLAVLQALSVLHAQG---VI 269
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HRD+K+ +ILL D + DFG + V GT +APE +S +
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEV 328
Query: 488 DVFGFGILLLELITGQRALDFGRAANQ-----RGVMLDWVKKLHQEGKLSQMVDKDLKGN 542
D++ GI+++E++ G+ F + R + +K LH+ V LKG
Sbjct: 329 DIWSLGIMVIEMVDGEPPY-FNEPPLKAMKMIRDNLPPRLKNLHK-------VSPSLKGF 380
Query: 543 FDRIELEEMVQVA 555
DR+ + + Q A
Sbjct: 381 LDRLLVRDPAQRA 393
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHR 358
+S+F K++LG G +G+V G +VA+K+++ ++ ++ E++ + H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 359 NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYL 418
N++ + ++ Y+ + + L I + L + T R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVL 128
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR---DSHVTTAVRGTVGHI-- 473
H +IHRD+K +N+L++ + + V DFGLA+++D +S T G ++
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 474 ----APE-YLSTGQSSEKTDVFGFGILLLELI 500
APE L++ + S DV+ G +L EL
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 14/224 (6%)
Query: 282 EVSLGHLKRYTFKELRAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG 340
EVSL K R + F +LG+G FG ++ + G A+K LK I
Sbjct: 138 EVSLAKPKH------RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA 191
Query: 341 GEVQFQTEVETISLAVHRN-LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPAL 399
+ T E L R+ L + ++RL NG L H+
Sbjct: 192 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVF 248
Query: 400 DWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459
R + L YLH + +++RD+K N++LD+D + DFGL K +D
Sbjct: 249 SEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKD 305
Query: 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
GT ++APE L D +G G+++ E++ G+
Sbjct: 306 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRL----KDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
LG G FG V KG + +V + + N + + E + + ++R+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRD--HIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C E+ +LV G + L+ H+ + ++ + + G+ YL E
Sbjct: 95 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYLEES- 146
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT--VGHIAPEYLST 480
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 147 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 481 GQSSEKTDVFGFGILLLELIT-GQR 504
+ S K+DV+ FG+L+ E + GQ+
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQK 229
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRL----KDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
LG G FG V KG + +V + + N + + E + + ++R+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRD--HIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C E+ +LV G + L+ H+ + ++ + + G+ YL E
Sbjct: 95 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYLEES- 146
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT--VGHIAPEYLST 480
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 147 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 481 GQSSEKTDVFGFGILLLELIT-GQR 504
+ S K+DV+ FG+L+ E + GQ+
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQK 229
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 14/224 (6%)
Query: 282 EVSLGHLKRYTFKELRAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG 340
EVSL K R + F +LG+G FG ++ + G A+K LK I
Sbjct: 135 EVSLAKPKH------RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA 188
Query: 341 GEVQFQTEVETISLAVHRN-LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPAL 399
+ T E L R+ L + ++RL NG L H+
Sbjct: 189 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVF 245
Query: 400 DWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459
R + L YLH + +++RD+K N++LD+D + DFGL K +D
Sbjct: 246 SEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKD 302
Query: 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 503
GT ++APE L D +G G+++ E++ G+
Sbjct: 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 19/225 (8%)
Query: 302 NFSAKNILGRGGFG---IVYKGCFSDGALVAVKRL-KDYNIAGGEVQ-FQTEVETISLAV 356
+F +G+G FG IV K + A+K + K + EV+ E++ +
Sbjct: 16 HFEILRAIGKGSFGKVCIVQKN--DTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE 73
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H L+ L E + +V + G + L+ ++H + K L
Sbjct: 74 HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEET----VKLFICELVMALD 129
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
YL Q +IIHRD+K NILLDE + DF +A +L R++ +TT GT ++APE
Sbjct: 130 YLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP-RETQITTMA-GTKPYMAPE 184
Query: 477 YLSTGQS---SEKTDVFGFGILLLELITGQRALDFGRAANQRGVM 518
S+ + S D + G+ EL+ G+R + + + ++
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRN 359
NF +G G +G+VYK G +VA+K+++ D G E+ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TEN+ LV+ ++ + G P K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLSFCH 120
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE-YL 478
+++HRD+K N+L++ + + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 479 STGQSSEKTDVFGFGILLLELITGQRAL 506
S D++ G + E++T +RAL
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 14/208 (6%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVH 357
+ N+ K LG+G F +V + + G A K + ++ + Q + E H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 358 RNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417
N++RL E+ LV+ + G L + I R A + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGG----ELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAV---VGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
H I+HR++K N+LL + + DFGLA ++ DS GT G+++
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 175
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE L S+ D++ G++L L+ G
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 136/345 (39%), Gaps = 91/345 (26%)
Query: 309 LGRGGFG-IVYKGCFS-----DGALVAVKRLKDYNIAGGEVQFQTEVETIS-LAVHRNLL 361
LGRG FG +V F VAVK LK+ A TE++ ++ + H N++
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 362 RLCGFCSTENERLLV-YPYMPNGSVASRLRD-------------HIHGR-----PALDWA 402
L G C+ + L+V Y G++++ L+ H+ + P L+
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPGLEQG 154
Query: 403 RRKRI---------------------------------------------ALGTARGLLY 417
++ R+ + ARG+ +
Sbjct: 155 KKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEF 214
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-VRGTVGHIAPE 476
L + K IHRD+ A NILL E+ + DFGLA+ + +V R + +APE
Sbjct: 215 LSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPE 271
Query: 477 YLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536
+ S K+DV+ +G+LL E+ + G + GV +D +
Sbjct: 272 SIFDKIYSTKSDVWSYGVLLWEIFS------LG-GSPYPGVQMD--------EDFCSRLR 316
Query: 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGL 581
+ ++ E+ Q+ L C +P RP+ +E+++ L GD L
Sbjct: 317 EGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL-GDLL 360
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRL----KDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
LG G FG V KG + +V + + N + + E + + ++R+
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRD--HIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C E+ +LV G + L+ H+ + ++ + + G+ YL E
Sbjct: 93 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYLEES- 144
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT--VGHIAPEYLST 480
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 145 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 202
Query: 481 GQSSEKTDVFGFGILLLELIT-GQR 504
+ S K+DV+ FG+L+ E + GQ+
Sbjct: 203 YKFSSKSDVWSFGVLMWEAFSYGQK 227
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHR 358
+S+F K++LG G +G+V G +VA+K+++ ++ ++ E++ + H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 359 NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYL 418
N++ + ++ Y+ + + L I + L + T R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVL 128
Query: 419 HEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH----------RDSHVTTAVRG 468
H +IHRD+K +N+L++ + + V DFGLA+++D + S +T V
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV-A 184
Query: 469 TVGHIAPE-YLSTGQSSEKTDVFGFGILLLELI 500
T + APE L++ + S DV+ G +L EL
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRL----KDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
LG G FG V KG + +V + + N + + E + + ++R+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRD--HIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C E+ +LV G + L+ H+ + ++ + + G+ YL E
Sbjct: 75 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYLEES- 126
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT--VGHIAPEYLST 480
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 127 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 481 GQSSEKTDVFGFGILLLELIT-GQR 504
+ S K+DV+ FG+L+ E + GQ+
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQK 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 303 FSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAGGEVQFQTEVET--ISLAVHRN 359
+ + LG G FG V + VA+K + + ++ + E E + L H +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L +T + ++V Y L D+I + + +R + Y H
Sbjct: 71 IIKLYDVITTPTDIVMVIEY-----AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH 125
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479
KI+HRD+K N+LLD++ + DFGL+ ++ D + G+ + APE ++
Sbjct: 126 RH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPEVIN 180
Query: 480 TG-QSSEKTDVFGFGILLLELITGQRALD 507
+ + DV+ GI+L ++ G+ D
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRL----KDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
LG G FG V KG + +V + + N + + E + + ++R+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRD--HIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C E+ +LV G + L+ H+ + ++ + + G+ YL E
Sbjct: 79 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYLEES- 130
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT--VGHIAPEYLST 480
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 131 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 188
Query: 481 GQSSEKTDVFGFGILLLELIT-GQR 504
+ S K+DV+ FG+L+ E + GQ+
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQK 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 21/236 (8%)
Query: 299 ATSNFSAKNILGRGGFGIVYKG--CFSDGALVAVKRLKDYNIAGG-------EVQFQTEV 349
A + +G G +G V+K + G VA+KR++ G EV +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 350 ETISLAVHRNLLRLCGFCS---TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKR 406
ET H N++RL C+ T+ E L + + D + P + K
Sbjct: 69 ETFE---HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV-PEPGVPTETIKD 124
Query: 407 IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAV 466
+ RGL +LH +++HRD+K NIL+ + + DFGLA++ + T+V
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSV 179
Query: 467 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWV 522
T+ + APE L + D++ G + E+ + +Q G +LD +
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 304 SAKNILGRGGFGIVYKGC--FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL 361
S ILG G FG V+K C + G +A K +K + E + + E+ ++ H NL+
Sbjct: 92 SKTEILGGGRFGQVHK-CEETATGLKLAAKIIKTRGMKDKE-EVKNEISVMNQLDHANLI 149
Query: 362 RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWAR-RKRIALGTARGLLYLHE 420
+L ++N+ +LV Y+ G + R+ D + LD K+I G+ ++H+
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQIC----EGIRHMHQ 205
Query: 421 QCDPKIIHRDVKAANIL-LDEDFEAV-VGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL 478
I+H D+K NIL ++ D + + + DFGLA+ R+ GT +APE +
Sbjct: 206 MY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF--GTPEFLAPEVV 260
Query: 479 STGQSSEKTDVFGFGILLLELITG 502
+ S TD++ G++ L++G
Sbjct: 261 NYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 303 FSAKNILGRGGFGIVYK----GCFSDGALVAVKRLKDYNI---AGGEVQFQTEVETISLA 355
F +LG+GG+G V++ + G + A+K LK I A + E +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRL-RDHIHGR-PALDWARRKRIALGTAR 413
H ++ L T + L+ Y+ G + +L R+ I A + +ALG
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG--- 135
Query: 414 GLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHI 473
+LH++ II+RD+K NI+L+ + DFGL K H D VT GT+ ++
Sbjct: 136 ---HLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH-DGTVTHTFCGTIEYM 188
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITG 502
APE L + D + G L+ +++TG
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
+G G GIV S G LVAVK++ E+ F EV + H N++ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 95
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
+E +V ++ G++ + H R ++ + + L + L LH Q +I
Sbjct: 96 LVGDELWVVMEFLEGGALTDIV---THTR--MNEEQIAAVCLAVLQALSVLHAQG---VI 147
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HRD+K+ +ILL D + DFG + V GT +APE +S +
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEV 206
Query: 488 DVFGFGILLLELITGQ 503
D++ GI+++E++ G+
Sbjct: 207 DIWSLGIMVIEMVDGE 222
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRL----KDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
LG G FG V KG + +V + + N + + E + + ++R+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRD--HIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C E+ +LV G + L+ H+ + ++ + + G+ YL E
Sbjct: 85 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYLEES- 136
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT--VGHIAPEYLST 480
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 137 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 194
Query: 481 GQSSEKTDVFGFGILLLELIT-GQR 504
+ S K+DV+ FG+L+ E + GQ+
Sbjct: 195 YKFSSKSDVWSFGVLMWEAFSYGQK 219
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 14/208 (6%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVH 357
+ N+ K LG+G F +V + + G A K + ++ + Q + E H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 358 RNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417
N++RL E+ LV+ + G L + I R A + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGG----ELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAV---VGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
H I+HR++K N+LL + + DFGLA ++ DS GT G+++
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 175
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE L S+ D++ G++L L+ G
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 15/213 (7%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP--ALDWARRKRIALGTARG 414
H N+++L TEN+ LV+ ++ + L+D + + K +G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-----SMDLKDFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
L + H +++HRD+K N+L++ + + DFGLA+ V T+ + A
Sbjct: 118 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRA 173
Query: 475 PE-YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
PE L S D++ G + E++T +RAL
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA 355
R+ NF +G G GIV S G LVAVK++ E+ F EV +
Sbjct: 19 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDY 74
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGL 415
H N++ + +E +V ++ G++ + H R ++ + + L + L
Sbjct: 75 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTR--MNEEQIAAVCLAVLQAL 129
Query: 416 LYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAP 475
LH Q +IHRD+K+ +ILL D + DFG + V GT +AP
Sbjct: 130 SVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAP 185
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITGQ 503
E +S + D++ GI+++E++ G+
Sbjct: 186 ELISRLPYGPEVDIWSLGIMVIEMVDGE 213
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 15/213 (7%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP--ALDWARRKRIALGTARG 414
H N+++L TEN+ LV+ ++ + L+D + + K +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-----SMDLKDFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
L + H +++HRD+K N+L++ + + DFGLA+ V T+ + A
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRA 174
Query: 475 PE-YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
PE L S D++ G + E++T +RAL
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
+G G GIV S G LVAVK++ E+ F EV + H N++ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 97
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
+E +V ++ G++ + H R ++ + + L + L LH Q +I
Sbjct: 98 LVGDELWVVMEFLEGGALTDIV---THTR--MNEEQIAAVCLAVLQALSVLHAQG---VI 149
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HRD+K+ +ILL D + DFG + V GT +APE +S +
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEV 208
Query: 488 DVFGFGILLLELITGQ 503
D++ GI+++E++ G+
Sbjct: 209 DIWSLGIMVIEMVDGE 224
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRN 359
NF +G G +G+VYK G +VA+K+++ D G E+ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TEN+ LV+ ++ + G P K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 119
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE-YL 478
+++HRD+K N+L++ + + DFGLA+ T V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 175
Query: 479 STGQSSEKTDVFGFGILLLELITGQRAL 506
S D++ G + E++T +RAL
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 14/208 (6%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVH 357
+ N+ K LG+G F +V + + G A K + ++ + Q + E H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 358 RNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417
N++RL E+ LV+ + G L + I R A + Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQILESIAY 119
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAV---VGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
H I+HR++K N+LL + + DFGLA ++ DS GT G+++
Sbjct: 120 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 174
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE L S+ D++ G++L L+ G
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 27/221 (12%)
Query: 297 RAATSNFSAKNILGRGGFGIVYK----GCFSDGALVAVKRLKDYNIA-GGEVQFQTEVET 351
+ NF +LG G +G V+ G L A+K LK I + T E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 352 ISLAVHRN---LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKR-- 406
L R L+ L TE + L+ Y+ G + + L ++R+R
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL------------SQRERFT 157
Query: 407 ---IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVT 463
+ + +L L II+RD+K NILLD + V+ DFGL+K ++
Sbjct: 158 EHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA 217
Query: 464 TAVRGTVGHIAPEYLSTGQS--SEKTDVFGFGILLLELITG 502
GT+ ++AP+ + G S + D + G+L+ EL+TG
Sbjct: 218 YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 8/209 (3%)
Query: 297 RAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLA 355
R + F +LG+G FG ++ + G A+K LK I + T E L
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 356 VHRN-LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
R+ L + ++RL NG L H+ R +
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSA 120
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
L YLH + + +++RD+K N++LD+D + DFGL K +D GT ++A
Sbjct: 121 LDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLA 177
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITGQ 503
PE L D +G G+++ E++ G+
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRL----KDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
LG G FG V KG + +V + + N + + E + + ++R+
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRD--HIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C E+ +LV G + L+ H+ + ++ + + G+ YL E
Sbjct: 73 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYLEES- 124
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT--VGHIAPEYLST 480
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 125 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 182
Query: 481 GQSSEKTDVFGFGILLLELIT-GQR 504
+ S K+DV+ FG+L+ E + GQ+
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFSYGQK 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 8/209 (3%)
Query: 297 RAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLA 355
R + F +LG+G FG ++ + G A+K LK I + T E L
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 356 VHRN-LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
R+ L + ++RL NG L H+ R +
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSA 122
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
L YLH + + +++RD+K N++LD+D + DFGL K +D GT ++A
Sbjct: 123 LDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLA 179
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITGQ 503
PE L D +G G+++ E++ G+
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 109/253 (43%), Gaps = 24/253 (9%)
Query: 309 LGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
+G G GIV S G LVAVK++ E+ F EV + H N++ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 140
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
+E +V ++ G++ + H R ++ + + L + L LH Q +I
Sbjct: 141 LVGDELWVVMEFLEGGALTDIV---THTR--MNEEQIAAVCLAVLQALSVLHAQG---VI 192
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HRD+K+ +ILL D + DFG + V GT +APE +S +
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEV 251
Query: 488 DVFGFGILLLELITGQRALDFGRAANQRGVML-----DWVKKLHQEGKLSQMVDKDLKGN 542
D++ GI+++E++ G+ F + M+ +K LH+ V LKG
Sbjct: 252 DIWSLGIMVIEMVDGEPPY-FNEPPLKAMKMIRDNLPPRLKNLHK-------VSPSLKGF 303
Query: 543 FDRIELEEMVQVA 555
DR+ + + Q A
Sbjct: 304 LDRLLVRDPAQRA 316
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 303 FSAKNILGRGGFGIVYK----GCFSDGALVAVKRLKDYNI---AGGEVQFQTEVETISLA 355
F +LG+GG+G V++ + G + A+K LK I A + E +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRL-RDHIHGR-PALDWARRKRIALGTAR 413
H ++ L T + L+ Y+ G + +L R+ I A + +ALG
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG--- 135
Query: 414 GLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHI 473
+LH++ II+RD+K NI+L+ + DFGL K H D VT GT+ ++
Sbjct: 136 ---HLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH-DGTVTHXFCGTIEYM 188
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITG 502
APE L + D + G L+ +++TG
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 25/222 (11%)
Query: 294 KELRAATSNFSAKNILGRGGFGIV----YKGCFSDGALVAVKRLKDYNIA--GGEVQFQT 347
++LR ++ ++GRG FG V +K S + A+K L + + F
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHK---STRKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLL--VYPYMPNGSVASRLRDHIHGRPALDWARRK 405
E + ++ A +++L F + +++R L V YMP G + + + ++ WAR
Sbjct: 124 ERDIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WAR-- 176
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA 465
TA +L L IHRDVK N+LLD+ + DFG ++
Sbjct: 177 ---FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 466 VRGTVGHIAPEYLST----GQSSEKTDVFGFGILLLELITGQ 503
GT +I+PE L + G + D + G+ L E++ G
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 275
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 25/222 (11%)
Query: 294 KELRAATSNFSAKNILGRGGFGIV----YKGCFSDGALVAVKRLKDYNIA--GGEVQFQT 347
++LR ++ ++GRG FG V +K S + A+K L + + F
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHK---STRKVYAMKLLSKFEMIKRSDSAFFWE 118
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLL--VYPYMPNGSVASRLRDHIHGRPALDWARRK 405
E + ++ A +++L F + +++R L V YMP G + + + ++ WAR
Sbjct: 119 ERDIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WAR-- 171
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA 465
TA +L L IHRDVK N+LLD+ + DFG ++
Sbjct: 172 ---FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228
Query: 466 VRGTVGHIAPEYLST----GQSSEKTDVFGFGILLLELITGQ 503
GT +I+PE L + G + D + G+ L E++ G
Sbjct: 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 270
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 54/241 (22%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFS--DGALVAVKRLKDYNI------------------AG 340
+ ++ K+ +G+G +G+V K ++ D A+K L + G
Sbjct: 13 NQYTLKDEIGKGSYGVV-KLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 341 GEVQFQTEVETISLAV-------HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHI 393
G +Q + +E + + H N+++L NE L YM + + +
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHL---YM--------VFELV 120
Query: 394 HGRPALDWARRKRIALGTAR--------GLLYLHEQCDPKIIHRDVKAANILLDEDFEAV 445
+ P ++ K ++ AR G+ YLH Q KIIHRD+K +N+L+ ED
Sbjct: 121 NQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIK 177
Query: 446 VGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELITG 502
+ DFG++ D+ ++ V GT +APE LS + S + DV+ G+ L + G
Sbjct: 178 IADFGVSNEFKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG 236
Query: 503 Q 503
Q
Sbjct: 237 Q 237
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
+G+G G VY + G VA++++ E+ E+ + + N++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 86
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
+E +V Y+ GS+ + + +D + + + L +LH ++I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HRD+K+ NILL D + DFG + S +T V GT +APE ++ K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 488 DVFGFGILLLELITGQ 503
D++ GI+ +E+I G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 25/222 (11%)
Query: 294 KELRAATSNFSAKNILGRGGFGIV----YKGCFSDGALVAVKRLKDYNIA--GGEVQFQT 347
++LR ++ ++GRG FG V +K S + A+K L + + F
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHK---STRKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLL--VYPYMPNGSVASRLRDHIHGRPALDWARRK 405
E + ++ A +++L F + +++R L V YMP G + + + ++ WAR
Sbjct: 124 ERDIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WAR-- 176
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA 465
TA +L L IHRDVK N+LLD+ + DFG ++
Sbjct: 177 ---FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 466 VRGTVGHIAPEYLST----GQSSEKTDVFGFGILLLELITGQ 503
GT +I+PE L + G + D + G+ L E++ G
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 275
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 8/209 (3%)
Query: 297 RAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLA 355
R + F +LG+G FG ++ + G A+K LK I + T E L
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 356 VHRN-LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
R+ L + ++RL NG L H+ R +
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSA 121
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
L YLH + + +++RD+K N++LD+D + DFGL K +D GT ++A
Sbjct: 122 LDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLA 178
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITGQ 503
PE L D +G G+++ E++ G+
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
+G G GIV S G LVAVK++ E+ F EV + H N++ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 90
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
+E +V ++ G++ + H R ++ + + L + L LH Q +I
Sbjct: 91 LVGDELWVVMEFLEGGALTDIV---THTR--MNEEQIAAVCLAVLQALSVLHAQG---VI 142
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HRD+K+ +ILL D + DFG + V GT +APE +S +
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEV 201
Query: 488 DVFGFGILLLELITGQ 503
D++ GI+++E++ G+
Sbjct: 202 DIWSLGIMVIEMVDGE 217
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 21/236 (8%)
Query: 299 ATSNFSAKNILGRGGFGIVYKG--CFSDGALVAVKRLKDYNIAGG-------EVQFQTEV 349
A + +G G +G V+K + G VA+KR++ G EV +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 350 ETISLAVHRNLLRLCGFCS---TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKR 406
ET H N++RL C+ T+ E L + + D + P + K
Sbjct: 69 ETFE---HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV-PEPGVPTETIKD 124
Query: 407 IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAV 466
+ RGL +LH +++HRD+K NIL+ + + DFGLA++ + T+V
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSV 179
Query: 467 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWV 522
T+ + APE L + D++ G + E+ + +Q G +LD +
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 14/208 (6%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVH 357
+ N+ K LG+G F +V + + G A K + ++ + Q + E H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 358 RNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417
N++RL E+ LV+ + G L + I R A + Y
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGG----ELFEDIVAREFYSEADASHCIQQILESIAY 143
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAV---VGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
H I+HR++K N+LL + + DFGLA ++ DS GT G+++
Sbjct: 144 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 198
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE L S+ D++ G++L L+ G
Sbjct: 199 PEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 21/236 (8%)
Query: 299 ATSNFSAKNILGRGGFGIVYKG--CFSDGALVAVKRLKDYNIAGG-------EVQFQTEV 349
A + +G G +G V+K + G VA+KR++ G EV +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 350 ETISLAVHRNLLRLCGFCS---TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKR 406
ET H N++RL C+ T+ E L + + D + P + K
Sbjct: 69 ETFE---HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV-PEPGVPTETIKD 124
Query: 407 IALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAV 466
+ RGL +LH +++HRD+K NIL+ + + DFGLA++ + T+V
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSV 179
Query: 467 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWV 522
T+ + APE L + D++ G + E+ + +Q G +LD +
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 19/205 (9%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRL----KDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
LG G FG V KG + +V + + N + + E + + ++R+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRD--HIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C E+ +LV G + L+ H+ + ++ + + G+ YL E
Sbjct: 79 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYLEES- 130
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTVGHIAPEYLST 480
+HRD+ A N+LL A + DFGL+K L D T + V APE ++
Sbjct: 131 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINY 188
Query: 481 GQSSEKTDVFGFGILLLELIT-GQR 504
+ S K+DV+ FG+L+ E + GQ+
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQK 213
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 15/213 (7%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP--ALDWARRKRIALGTARG 414
H N+++L TEN+ LV+ ++ L+D + + K +G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-----HQDLKDFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
L + H +++HRD+K N+L++ + + DFGLA+ V T+ + A
Sbjct: 116 LAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRA 171
Query: 475 PE-YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
PE L S D++ G + E++T +RAL
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 300 TSNFSAKNILGRGGFG--IVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV- 356
+ + + +LG+G FG I+ K + G AVK I+ +V+ +T+ E++ V
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKV-----ISKRQVKQKTDKESLLREVQ 78
Query: 357 ------HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
H N+ +L F + LV G L D I R RI
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGE----LFDEIISRKRFSEVDAARIIRQ 134
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTTAVR 467
G+ Y H+ KI+HRD+K N+LL+ +D + DFGL+ + S
Sbjct: 135 VLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKXKDKI 189
Query: 468 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
GT +IAPE L G EK DV+ G++L L++G
Sbjct: 190 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 120
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 119
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 117
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPE 173
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPL---PLIKSYLFQLLQGLA 120
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 19/236 (8%)
Query: 309 LGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
LG GG G+V+ +D VA+K++ + + + E++ I H N++++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALR-EIKIIRRLDHDNIVKVFEIL 77
Query: 368 STENERL---------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYL 418
+L L Y+ + + L + + P L+ R RGL Y+
Sbjct: 78 GPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHAR-LFMYQLLRGLKYI 136
Query: 419 HEQCDPKIIHRDVKAANILLD-EDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVG--HIAP 475
H ++HRD+K AN+ ++ ED +GDFGLA+++D SH G V + +P
Sbjct: 137 HSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSP 193
Query: 476 E-YLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530
LS ++ D++ G + E++TG+ Q ++L+ + +H+E +
Sbjct: 194 RLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDR 249
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 119
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 117
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPE 173
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 117
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPE 173
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 119
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 118
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 121
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 177
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRL----KDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
LG G FG V KG + +V + + N + + E + + ++R+
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRD--HIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C E+ +LV G + L+ H+ + ++ + + G+ YL E
Sbjct: 437 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYLEES- 488
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT--VGHIAPEYLST 480
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 489 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 546
Query: 481 GQSSEKTDVFGFGILLLELIT-GQR 504
+ S K+DV+ FG+L+ E + GQ+
Sbjct: 547 YKFSSKSDVWSFGVLMWEAFSYGQK 571
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 120
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 11/208 (5%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRN 359
NF +G G +G+VYK G +VA+K+++ D G E+ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TEN+ LV+ ++ + G P K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 119
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE-YL 478
+++HRD+K N+L++ + + DFGLA+ V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILL 175
Query: 479 STGQSSEKTDVFGFGILLLELITGQRAL 506
S D++ G + E++T +RAL
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 309 LGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHR--NLLRLCG 365
+G G G V+K F G ++AVK+++ + +++ + L H +++ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV-LKSHDCPYIVQCFG 91
Query: 366 FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK 425
T + + M G+ A +L+ + G + ++ + + L YL E+
Sbjct: 92 TFITNTDVFIAMELM--GTCAEKLKKRMQG--PIPERILGKMTVAIVKALYYLKEK--HG 145
Query: 426 IIHRDVKAANILLDEDFEAVVGDFGLA-KLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
+IHRDVK +NILLDE + + DFG++ +L+D + + G ++APE + +
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA---GCAAYMAPERIDPPDPT 202
Query: 485 E-----KTDVFGFGILLLELITGQ 503
+ + DV+ GI L+EL TGQ
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQ 226
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 117
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 120
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 118
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRL----KDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
LG G FG V KG + +V + + N + + E + + ++R+
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRD--HIHGRPALDWARRKRIALGTARGLLYLHEQC 422
G C E+ +LV G + L+ H+ + ++ + + G+ YL E
Sbjct: 438 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ------VSMGMKYLEES- 489
Query: 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT--VGHIAPEYLST 480
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 490 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 547
Query: 481 GQSSEKTDVFGFGILLLELIT-GQR 504
+ S K+DV+ FG+L+ E + GQ+
Sbjct: 548 YKFSSKSDVWSFGVLMWEAFSYGQK 572
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 308 ILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQT----EVETISLAVHRNLLRL 363
+LG+G FG V K C D +K N A + + + EVE + H N+++L
Sbjct: 29 MLGKGSFGEVLK-C-KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 364 CGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCD 423
+ +V G L D I R RI G+ Y+H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGE----LFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH-- 140
Query: 424 PKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST 480
I+HRD+K NILL ++D + + DFGL+ +++ + + GT +IAPE L
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPEVLR- 196
Query: 481 GQSSEKTDVFGFGILLLELITG 502
G EK DV+ G++L L++G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 137/318 (43%), Gaps = 32/318 (10%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRL--KDYNIAGGEVQFQTEVETISLA 355
+ + ++G G +G+V K D G +VA+K+ D + ++ + E++ +
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR-EIKLLKQL 81
Query: 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP-ALDWARRKRIALGTARG 414
H NL+ L C + LV+ + V + D + P LD+ ++ G
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEF-----VDHTILDDLELFPNGLDYQVVQKYLFQIING 136
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
+ + H IIHRD+K NIL+ + + DFG A+ L V T + A
Sbjct: 137 IGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVATRWYRA 192
Query: 475 PEYL-STGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKL---HQE-- 528
PE L + + DV+ G L+ E+ G+ +Q ++ + L HQE
Sbjct: 193 PELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELF 252
Query: 529 --------GKLSQMVDKD-LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLK--MLE 577
+L ++ +++ L+ + ++ E ++ +A C +P RP +E+L +
Sbjct: 253 NKNPVFAGVRLPEIKEREPLERRYPKLS-EVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
Query: 578 GDGLAEKWEASQKIETPR 595
DG AE++ +++ +
Sbjct: 312 MDGFAERFSQELQLKVQK 329
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 25/217 (11%)
Query: 302 NFSAKNILGRGGFGIV----YKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV- 356
N+ K ILGRG +V +K + A+ + + + EVQ E + +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 357 -----HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGT 411
H N+++L T LV+ M G L D++ + L ++I
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGE----LFDYLTEKVTLSEKETRKIMRAL 133
Query: 412 ARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVG 471
+ LH+ I+HRD+K NILLD+D + DFG + LD + +V GT
Sbjct: 134 LEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LRSVCGTPS 188
Query: 472 HIAPEYLSTGQSS------EKTDVFGFGILLLELITG 502
++APE + + ++ D++ G+++ L+ G
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 118
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 11/208 (5%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRN 359
NF +G G +G+VYK G +VA+K+++ D G E+ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TEN+ LV+ ++ + G P K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 119
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE-YL 478
+++HRD+K N+L++ + + DFGLA+ V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILL 175
Query: 479 STGQSSEKTDVFGFGILLLELITGQRAL 506
S D++ G + E++T +RAL
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 302 NFSAKNILGRGGFGIVY--KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
F +LG G F V+ K + G L A+K +K + A + + E+ + H N
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLT-GKLFALKCIKK-SPAFRDSSLENEIAVLKKIKHEN 67
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
++ L + LV + G L D I R + + YLH
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGG----ELFDRILERGVYTEKDASLVIQQVLSAVKYLH 123
Query: 420 EQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
E I+HRD+K N+L +E+ + ++ DFGL+K+ + + + GT G++APE
Sbjct: 124 EN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPE 177
Query: 477 YLSTGQSSEKTDVFGFGILLLELITG 502
L+ S+ D + G++ L+ G
Sbjct: 178 VLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 11/208 (5%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRN 359
NF +G G +G+VYK G +VA+K+++ D G E+ + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TEN+ LV+ ++ + G P K +GL + H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 121
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE-YL 478
+++HRD+K N+L++ + + DFGLA+ V T+ + APE L
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 479 STGQSSEKTDVFGFGILLLELITGQRAL 506
S D++ G + E++T +RAL
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 11/208 (5%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRN 359
NF +G G +G+VYK G +VA+ +++ D G E+ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TEN+ LV+ ++ + G P K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 120
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE-YL 478
+++HRD+K N+L++ + + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 479 STGQSSEKTDVFGFGILLLELITGQRAL 506
S D++ G + E++T +RAL
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 11/208 (5%)
Query: 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRN 359
NF +G G +G+VYK G +VA+ +++ D G E+ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
+++L TEN+ LV+ ++ + G P K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 119
Query: 420 EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE-YL 478
+++HRD+K N+L++ + + DFGLA+ T V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 175
Query: 479 STGQSSEKTDVFGFGILLLELITGQRAL 506
S D++ G + E++T +RAL
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 309 LGRGGFGIVYKGCFSD----GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G GIV C + G VAVK++ E+ F EV + H N++ +
Sbjct: 53 IGEGSTGIV---CIATEKHTGKQVAVKKMDLRKQQRRELLF-NEVVIMRDYHHDNVVDMY 108
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
+E +V ++ G++ + H R ++ + + L R L YLH Q
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIV---THTR--MNEEQIATVCLSVLRALSYLHNQ--- 160
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
+IHRD+K+ +ILL D + DFG + ++ + GT +APE +S
Sbjct: 161 GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS-KEVPKRKXLVGTPYWMAPEVISRLPYG 219
Query: 485 EKTDVFGFGILLLELITGQ 503
+ D++ GI+++E+I G+
Sbjct: 220 TEVDIWSLGIMVIEMIDGE 238
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 301 SNFSAKNILGRGGFGIV----YKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV 356
N+ K ILGRG +V +K + A+ + + + EVQ E + +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 357 ------HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
H N+++L T LV+ M G L D++ + L ++I
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGE----LFDYLTEKVTLSEKETRKIMRA 119
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
+ LH+ I+HRD+K NILLD+D + DFG + LD + V GT
Sbjct: 120 LLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTP 174
Query: 471 GHIAPEYLSTGQSS------EKTDVFGFGILLLELITG 502
++APE + + ++ D++ G+++ L+ G
Sbjct: 175 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 308 ILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQT----EVETISLAVHRNLLRL 363
+LG+G FG V K C D +K N A + + + EVE + H N+++L
Sbjct: 29 MLGKGSFGEVLK-C-KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 364 CGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCD 423
+ +V G L D I R RI G+ Y+H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGE----LFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH-- 140
Query: 424 PKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST 480
I+HRD+K NILL ++D + + DFGL+ +++ + + GT +IAPE L
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPEVLR- 196
Query: 481 GQSSEKTDVFGFGILLLELITG 502
G EK DV+ G++L L++G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 11/210 (5%)
Query: 297 RAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQ-TEVETIS 353
+ ++F +LG+G FG ++ + G A+K L K+ IA EV TE +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
H L L T + V Y G + H+ R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF----HLSRERVFTEERARFYGAEIVS 116
Query: 414 GLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHI 473
L YLH + +++RD+K N++LD+D + DFGL K D GT ++
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYL 172
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L D +G G+++ E++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 11/210 (5%)
Query: 297 RAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQ-TEVETIS 353
+ ++F +LG+G FG ++ + G A+K L K+ IA EV TE +
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
H L L T + V Y G + H+ R +
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF----HLSRERVFTEERARFYGAEIVS 121
Query: 414 GLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHI 473
L YLH + +++RD+K N++LD+D + DFGL K D GT ++
Sbjct: 122 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYL 177
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L D +G G+++ E++ G+
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 11/210 (5%)
Query: 297 RAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQ-TEVETIS 353
+ ++F +LG+G FG ++ + G A+K L K+ IA EV TE +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
H L L T + V Y G L H+ R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGE----LFFHLSRERVFTEERARFYGAEIVS 116
Query: 414 GLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHI 473
L YLH + +++RD+K N++LD+D + DFGL K D GT ++
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYL 172
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L D +G G+++ E++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 308 ILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQT----EVETISLAVHRNLLRL 363
+LG+G FG V K C D +K N A + + + EVE + H N+++L
Sbjct: 29 MLGKGSFGEVLK-C-KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 364 CGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCD 423
+ +V G L D I R RI G+ Y+H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGE----LFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH-- 140
Query: 424 PKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST 480
I+HRD+K NILL ++D + + DFGL+ +++ + + GT +IAPE L
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPEVLR- 196
Query: 481 GQSSEKTDVFGFGILLLELITG 502
G EK DV+ G++L L++G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 11/210 (5%)
Query: 297 RAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQ-TEVETIS 353
+ ++F +LG+G FG ++ + G A+K L K+ IA EV TE +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
H L L T + V Y G L H+ R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGE----LFFHLSRERVFTEERARFYGAEIVS 116
Query: 414 GLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHI 473
L YLH + +++RD+K N++LD+D + DFGL K D GT ++
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYL 172
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L D +G G+++ E++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 11/210 (5%)
Query: 297 RAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQ-TEVETIS 353
+ ++F +LG+G FG ++ + G A+K L K+ IA EV TE +
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
H L L T + V Y G L H+ R +
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGE----LFFHLSRERVFTEERARFYGAEIVS 119
Query: 414 GLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHI 473
L YLH + +++RD+K N++LD+D + DFGL K D GT ++
Sbjct: 120 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYL 175
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L D +G G+++ E++ G+
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 301 SNFSAKNILGRGGFGIV----YKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV 356
N+ K ILGRG +V +K + A+ + + + EVQ E + +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 357 ------HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
H N+++L T LV+ M G L D++ + L ++I
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGE----LFDYLTEKVTLSEKETRKIMRA 132
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
+ LH+ I+HRD+K NILLD+D + DFG + LD + V GT
Sbjct: 133 LLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTP 187
Query: 471 GHIAPEYLSTGQSS------EKTDVFGFGILLLELITG 502
++APE + + ++ D++ G+++ L+ G
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 11/211 (5%)
Query: 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLK-DYNIAGGEVQFQTEVETISLAV 356
+ NF +G G +G+VYK G +VA+K+++ D G E+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H N+++L TEN+ LV+ ++ + G P K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 120
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ H +++HRD+K N+L++ + + DFGLA+ V T+ + APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 477 -YLSTGQSSEKTDVFGFGILLLELITGQRAL 506
L S D++ G + E++T +RAL
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 11/210 (5%)
Query: 297 RAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQ-TEVETIS 353
+ ++F +LG+G FG ++ + G A+K L K+ IA EV TE +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
H L L T + V Y G + H+ R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF----HLSRERVFTEERARFYGAEIVS 116
Query: 414 GLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHI 473
L YLH + +++RD+K N++LD+D + DFGL K D GT ++
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYL 172
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L D +G G+++ E++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
+G+G G VY + G VA++++ E+ E+ + + N++
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 87
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
+E +V Y+ GS+ + + +D + + + L +LH ++I
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HR++K+ NILL D + DFG + S +T V GT +APE ++ K
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 488 DVFGFGILLLELITGQ 503
D++ GI+ +E+I G+
Sbjct: 199 DIWSLGIMAIEMIEGE 214
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 11/210 (5%)
Query: 297 RAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRL-KDYNIAGGEVQFQ-TEVETIS 353
+ ++F +LG+G FG ++ + G A+K L K+ IA EV TE +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
H L L T + V Y G + H+ R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF----HLSRERVFTEERARFYGAEIVS 116
Query: 414 GLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHI 473
L YLH + +++RD+K N++LD+D + DFGL K D GT ++
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYL 172
Query: 474 APEYLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L D +G G+++ E++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
+G+G G VY + G VA++++ E+ E+ + + N++
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 87
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
+E +V Y+ GS+ + + +D + + + L +LH ++I
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HRD+K+ NILL D + DFG + S + V GT +APE ++ K
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 488 DVFGFGILLLELITGQ 503
D++ GI+ +E+I G+
Sbjct: 199 DIWSLGIMAIEMIEGE 214
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
+G+G G VY + G VA++++ E+ E+ + + N++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 86
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
+E +V Y+ GS+ + + +D + + + L +LH ++I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HRD+K+ NILL D + DFG + S + V GT +APE ++ K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 488 DVFGFGILLLELITGQ 503
D++ GI+ +E+I G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 95/225 (42%), Gaps = 27/225 (12%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVY----KGCFSDGALVAVKRLK---------DYNIAG 340
KE + S F + LG G +G V K S+ A+ +K+ + + NI
Sbjct: 30 KEGKIGESYFKVRK-LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEK 88
Query: 341 GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALD 400
+ E+ + H N+++L + LV + G L + I R D
Sbjct: 89 FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGE----LFEQIINRHKFD 144
Query: 401 WARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED---FEAVVGDFGLAKLLDH 457
I G+ YLH+ I+HRD+K NILL+ + DFGL+
Sbjct: 145 ECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF-S 200
Query: 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+D + + GT +IAPE L + +EK DV+ G+++ L+ G
Sbjct: 201 KDYKLRDRL-GTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 15/122 (12%)
Query: 393 IHG-RPALDWARRKRIALGTAR----GLLYLHEQCDPKIIHRDVKAANILL--DEDFEAV 445
IHG R +LD+ +R+++ R L YLH Q I HRD+K N L ++ FE
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIK 210
Query: 446 VGDFGLAK---LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS--EKTDVFGFGILLLELI 500
+ DFGL+K L++ + + T GT +APE L+T S K D + G+LL L+
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLL 270
Query: 501 TG 502
G
Sbjct: 271 MG 272
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRI 407
EV + L H N+++L F + LV G L D I R + I
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG----ELFDEIIHRMKFNEVDAAVI 141
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTT 464
G+ YLH+ I+HRD+K N+LL ++D + DFGL+ + +++
Sbjct: 142 IKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK--MK 196
Query: 465 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
GT +IAPE L + EK DV+ G++L L+ G
Sbjct: 197 ERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAG 233
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F +G G FG ++ G A+K L + +++ + I A
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V YMP G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 11/196 (5%)
Query: 309 LGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
+G+G G VY + G VA++++ E+ E+ + + N++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 86
Query: 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427
+E +V Y+ GS+ + + +D + + + L +LH ++I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 487
HRD+K+ NILL D + DFG + S + V GT +APE ++ K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 488 DVFGFGILLLELITGQ 503
D++ GI+ +E+I G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F +G G FG ++ G A+K L + +++ + I A
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V YMP G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 297 RAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNI--AGGEVQFQTEVETIS 353
A S+F ++G+G FG ++ ++ AVK L+ I E +E +
Sbjct: 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 354 LAV-HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTA 412
V H L+ L T ++ V Y+ G L H+ R + A A
Sbjct: 94 KNVKHPFLVGLHFSFQTADKLYFVLDYINGG----ELFYHLQRERCFLEPRARFYAAEIA 149
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL-LDHRDSHVTTAVRGTVG 471
L YLH I++RD+K NILLD V+ DFGL K ++H + T+ GT
Sbjct: 150 SALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPE 204
Query: 472 HIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
++APE L D + G +L E++ G
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGXV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWY 193
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWY 193
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 147 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWY 199
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 184
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 302 NFSAKNILGRGGFGIVYKGCF-SDGALVAVK-------RLKDYNIAGGEVQFQTEVETIS 353
+ K+++GRG +V + + G AVK RL + EV+ T ET
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLE--EVREATRRETHI 152
Query: 354 L---AVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALG 410
L A H +++ L + + LV+ M G L D++ + AL + I
Sbjct: 153 LRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGE----LFDYLTEKVALSEKETRSIMRS 208
Query: 411 TARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTV 470
+ +LH I+HRD+K NILLD++ + + DFG + L+ + + GT
Sbjct: 209 LLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTP 263
Query: 471 GHIAPEYLSTGQSS------EKTDVFGFGILLLELITG 502
G++APE L ++ D++ G++L L+ G
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 193
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 135 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 187
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 147 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 199
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 185
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 200
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 134 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 186
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 200
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + E++ + I A
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y P G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+++D+ V DFGLAK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 190
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + E++ + I A
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y P G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+++D+ V DFGLAK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 190
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 200
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 184
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 195
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 185
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 146 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 198
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 193
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 194
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYV-ATRWY 190
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 12/211 (5%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQF---QTEVETISLAV- 356
+F ++GRG + V + R+ + + QTE A
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
H L+ L TE+ V Y+ G L H+ + L + + + L
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGD----LMFHMQRQRKLPEEHARFYSAEISLALN 167
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
YLHE+ II+RD+K N+LLD + + D+G+ K R T+ GT +IAPE
Sbjct: 168 YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSTFCGTPNYIAPE 223
Query: 477 YLSTGQSSEKTDVFGFGILLLELITGQRALD 507
L D + G+L+ E++ G+ D
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 184
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 159 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 211
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYV-ATRWY 194
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 208
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 207
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 190
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 208
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 207
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 194
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 194
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 24 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 83
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR + AR A
Sbjct: 84 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 139
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 140 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLA 192
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 28/234 (11%)
Query: 284 SLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKD-YNIAGG 341
+L LK +F + +G G +G+V G VA+K++ + +++
Sbjct: 38 NLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN 97
Query: 342 EVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGS----------VASRLRD 391
+ E++ + H N++ + + ++ P +P G + S L
Sbjct: 98 AKRTLRELKILKHFKHDNIIAI---------KDILRPTVPYGEFKSVYVVLDLMESDLHQ 148
Query: 392 HIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGL 451
IH L + RGL Y+H ++IHRD+K +N+L++E+ E +GDFG+
Sbjct: 149 IIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 205
Query: 452 AKLL---DHRDSHVTTAVRGTVGHIAPE-YLSTGQSSEKTDVFGFGILLLELIT 501
A+ L + T T + APE LS + ++ D++ G + E++
Sbjct: 206 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 346 QTEVETISLAV-HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARR 404
QTE A H L+ L TE+ V Y+ G L H+ + L
Sbjct: 57 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGD----LMFHMQRQRKLPEEHA 112
Query: 405 KRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTT 464
+ + + L YLHE+ II+RD+K N+LLD + + D+G+ K R T+
Sbjct: 113 RFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTS 168
Query: 465 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507
GT +IAPE L D + G+L+ E++ G+ D
Sbjct: 169 XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 346 QTEVETISLAV-HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARR 404
QTE A H L+ L TE+ V Y+ G L H+ + L
Sbjct: 68 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGD----LMFHMQRQRKLPEEHA 123
Query: 405 KRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTT 464
+ + + L YLHE+ II+RD+K N+LLD + + D+G+ K R T+
Sbjct: 124 RFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTS 179
Query: 465 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507
GT +IAPE L D + G+L+ E++ G+ D
Sbjct: 180 XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 346 QTEVETISLAV-HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARR 404
QTE A H L+ L TE+ V Y+ G L H+ + L
Sbjct: 53 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGD----LMFHMQRQRKLPEEHA 108
Query: 405 KRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTT 464
+ + + L YLHE+ II+RD+K N+LLD + + D+G+ K R T+
Sbjct: 109 RFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTS 164
Query: 465 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507
GT +IAPE L D + G+L+ E++ G+ D
Sbjct: 165 XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR + AR A
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 154
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLA 207
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 99/220 (45%), Gaps = 29/220 (13%)
Query: 295 ELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETIS 353
E+RA + +G G +G V GA VA+K+L Y E+ + +
Sbjct: 22 EVRAVYRDLQP---VGSGAYGAVCSAVDGRTGAKVAIKKL--YRPFQSELFAKRAYRELR 76
Query: 354 LAVHRNLLRLCGFCS--TENERL-------LVYPYMPNGSVASRLRDHIHGRPALDWARR 404
L H + G T +E L LV P+M G+ +L H L R
Sbjct: 77 LLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKH----EKLGEDRI 130
Query: 405 KRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTT 464
+ + +GL Y+H IIHRD+K N+ ++ED E + DFGLA+ DS +
Sbjct: 131 QFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXG 184
Query: 465 AVRGTVGHIAPEY-LSTGQSSEKTDVFGFGILLLELITGQ 503
V T + APE L+ + ++ D++ G ++ E+ITG+
Sbjct: 185 XV-VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D +T V T +
Sbjct: 165 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 217
Query: 473 IAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
APE + T D++ G ++ EL+TG+
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR + AR A
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 154
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-V 466
+ A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V
Sbjct: 199 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 467 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKK 524
R + +APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRR 308
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
L +EG + D EM Q L C P RP SE+++ L
Sbjct: 309 L-KEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 86/226 (38%), Gaps = 24/226 (10%)
Query: 306 KNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+ +L GGF VY+ G A+KRL Q L+ H N+++ C
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92
Query: 365 GFCSTENER-------LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417
S E L+ + G + L+ + R L +I T R + +
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKK-MESRGPLSCDTVLKIFYQTCRAVQH 151
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVR---------- 467
+H Q P IIHRD+K N+LL + DFG A + H + +A R
Sbjct: 152 MHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 468 -GTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITGQRALDFG 509
T + PE + S EK D++ G +L L Q + G
Sbjct: 211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG 256
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + D+GLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-V 466
+ A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V
Sbjct: 197 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 467 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKK 524
R + +APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRR 306
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
L +EG + D EM Q L C P RP SE+++ L
Sbjct: 307 L-KEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-V 466
+ A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V
Sbjct: 204 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 467 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKK 524
R + +APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRR 313
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
L +EG + D EM Q L C P RP SE+++ L
Sbjct: 314 L-KEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-V 466
+ A+G+ +L + K IHRD+ A NILL E + DFGLA+ + +V
Sbjct: 206 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 467 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--WVKK 524
R + +APE + + ++DV+ FG+LL E+ + G A+ GV +D + ++
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG-ASPYPGVKIDEEFCRR 315
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
L +EG + D EM Q L C P RP SE+++ L
Sbjct: 316 L-KEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F +G G FG ++ G A+K L + +++ + I A
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 71/188 (37%), Gaps = 34/188 (18%)
Query: 324 DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNG 383
D V ++R+ ++ Q Q + L + L R N R
Sbjct: 106 DAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR---------- 155
Query: 384 SVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE 443
L D HG I + A + +LH + ++HRD+K +NI D
Sbjct: 156 ---CSLEDREHGVCL-------HIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDV 202
Query: 444 AVVGDFGLAKLLDHRDSHVTTAV--------RGTVG---HIAPEYLSTGQSSEKTDVFGF 492
VGDFGL +D + T G VG +++PE + S K D+F
Sbjct: 203 VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSL 262
Query: 493 GILLLELI 500
G++L EL+
Sbjct: 263 GLILFELL 270
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN 359
++F +GRGGFG+V++ D A+KR++ N + EV+ ++ H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 360 LLR 362
++R
Sbjct: 66 IVR 68
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 284 SLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKD-YNIAGG 341
+L LK +F + +G G +G+V G VA+K++ + +++
Sbjct: 37 NLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN 96
Query: 342 EVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGS----------VASRLRD 391
+ E++ + H N++ + + ++ P +P G + S L
Sbjct: 97 AKRTLRELKILKHFKHDNIIAI---------KDILRPTVPYGEFKSVYVVLDLMESDLHQ 147
Query: 392 HIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGL 451
IH L + RGL Y+H ++IHRD+K +N+L++E+ E +GDFG+
Sbjct: 148 IIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204
Query: 452 AKLL-----DHRDSHVTTAVRGTVGHIAPE-YLSTGQSSEKTDVFGFGILLLELIT 501
A+ L +H+ + T T + APE LS + ++ D++ G + E++
Sbjct: 205 ARGLCTSPAEHQ--YFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 284 SLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRL--------KD 335
+L +L +Y KE +++ L +G F + C D A+K+ +D
Sbjct: 15 NLIYLNKYV-KEKDKYINDYRIIRTLNQGKFNKII-LCEKDNKFYALKKYEKSLLEKKRD 72
Query: 336 Y--------NIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVAS 387
+ +I F+ E++ I+ + L G + +E ++Y YM N S+
Sbjct: 73 FTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSIL- 131
Query: 388 RLRDHIHGRPALDWARRKRIALGTARGLL--------YLHEQCDPKIIHRDVKAANILLD 439
+ ++ LD I + + ++ Y+H + I HRDVK +NIL+D
Sbjct: 132 KFDEYFF---VLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMD 186
Query: 440 EDFEAVVGDFGLAK-LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSE--KTDVFGFGILL 496
++ + DFG ++ ++D + RGT + PE+ S S K D++ GI L
Sbjct: 187 KNGRVKLSDFGESEYMVDKK----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG V + G A+K L + +++ + I A
Sbjct: 39 AHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y P G + S LR GR + AR A
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 154
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR AR A
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARF--YAAQIVLT 154
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG V + G A+K L + +++ + I A
Sbjct: 31 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR + AR A
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 146
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 147 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 199
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 309 LGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLC 364
+G G GIV C + G VAVK + E+ F EV + H N++ +
Sbjct: 53 IGEGSTGIV---CLAREKHSGRQVAVKMMDLRKQQRRELLF-NEVVIMRDYQHFNVVEMY 108
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
E ++ ++ G++ I + L+ + + + L YLH Q
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTD-----IVSQVRLNEEQIATVCEAVLQALAYLHAQ--- 160
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
+IHRD+K+ +ILL D + DFG + +D + GT +APE +S +
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQIS-KDVPKRKXLVGTPYWMAPEVISRSLYA 219
Query: 485 EKTDVFGFGILLLELITGQ 503
+ D++ GI+++E++ G+
Sbjct: 220 TEVDIWSLGIMVIEMVDGE 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y P G + S LR GR + AR A
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 154
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+++D+ V DFG AK + R T + GT ++A
Sbjct: 155 FEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D + V T +
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGXV-ATRWY 208
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGL + H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y P G + S LR GR + AR A
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 154
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+++D+ V DFG AK + R T + GT ++A
Sbjct: 155 FEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG V + G A+K L + +++ + I A
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR + AR A
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 154
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D + V T +
Sbjct: 159 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGYV-ATRWY 211
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG V + G A+K L + +++ + I A
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR + AR A
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 154
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D + V T +
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFV-ATRWY 184
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D + V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG V + G A+K L + +++ + I A
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR + AR A
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 154
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H D + V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG V + G A+K L + +++ + I A
Sbjct: 59 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR + AR A
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 174
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 175 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 227
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG V + G A+K L + +++ + I A
Sbjct: 31 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+P G + S LR GR AR A
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARF--YAAQIVLT 146
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 147 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 199
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y P G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+++D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 110/265 (41%), Gaps = 39/265 (14%)
Query: 309 LGRGGFGIVYKGCF-SDGALVAVKR-LKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
+G+G FG V+K G VA+K+ L + G + E++ + L H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 367 CSTENERLLVYPY-MPNGSVASRLRDHIHGRPAL--------DWARRKRIALGTARGLLY 417
C T+ PY GS+ H L + KR+ GL Y
Sbjct: 86 CRTK-----ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK---LLDHRDSHVTTAVRGTVGHIA 474
+H KI+HRD+KAAN+L+ D + DFGLA+ L + + T+ +
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 475 PE-YLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533
PE L D++G G ++ E+ T R ++ + HQ +SQ
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT-------------RSPIMQGNTEQHQLALISQ 244
Query: 534 M---VDKDLKGNFDRIELEEMVQVA 555
+ + ++ N D EL E +++
Sbjct: 245 LCGSITPEVWPNVDNYELYEKLELV 269
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y P G + S LR GR AR A
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFXEPHARF--YAAQIVLT 154
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+++D+ V DFG AK + R T + GT ++A
Sbjct: 155 FEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y P G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+++D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 31/207 (14%)
Query: 309 LGRGGFGIVYKGCFSD-GALVAVKRLKD-------YNIAGGEVQFQTEVETISLAVHRNL 360
+G G +G+V+K D G +VA+K+ + IA E++ +++ H NL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK------HPNL 64
Query: 361 LRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
+ L + LV+ Y + +V L + G P K I T + + + H+
Sbjct: 65 VNLLEVFRRKRRLHLVFEYC-DHTVLHELDRYQRGVPE---HLVKSITWQTLQAVNFCHK 120
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL----DHRDSHVTTAVRGTVGHIAPE 476
IHRDVK NIL+ + + DFG A+LL D+ D V T + +PE
Sbjct: 121 H---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR-----WYRSPE 172
Query: 477 YL-STGQSSEKTDVFGFGILLLELITG 502
L Q DV+ G + EL++G
Sbjct: 173 LLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 112/274 (40%), Gaps = 39/274 (14%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKR-LKDYNIAGGEVQFQTEVETISLAVH 357
S + +G+G FG V+K G VA+K+ L + G + E++ + L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 358 RNLLRLCGFCSTENERLLVYPY-MPNGSVASRLRDHIHGRPAL--------DWARRKRIA 408
N++ L C T+ PY GS+ H L + KR+
Sbjct: 77 ENVVNLIEICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM 131
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK---LLDHRDSHVTTA 465
GL Y+H KI+HRD+KAAN+L+ D + DFGLA+ L + +
Sbjct: 132 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 466 VRGTVGHIAPE-YLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
T+ + PE L D++G G ++ E+ T R ++ +
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-------------RSPIMQGNTE 235
Query: 525 LHQEGKLSQM---VDKDLKGNFDRIELEEMVQVA 555
HQ +SQ+ + ++ N D EL E +++
Sbjct: 236 QHQLALISQLCGSITPEVWPNVDNYELYEKLELV 269
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 308 ILGRGGFGIVYKGCFSDGALVAVKR-LKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
++G G FG+V++ + VA+K+ L+D E+Q V+ H N++ L F
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVK------HPNVVDLKAF 100
Query: 367 CSTENERL------LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
+ ++ LV Y+P +V R + + + K R L Y+H
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159
Query: 421 QCDPKIIHRDVKAANILLDEDFEAV-VGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL- 478
I HRD+K N+LLD + + DFG AK+L + +V+ + + APE +
Sbjct: 160 I---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC--SRYYRAPELIF 214
Query: 479 STGQSSEKTDVFGFGILLLELITGQ 503
+ D++ G ++ EL+ GQ
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 112/274 (40%), Gaps = 39/274 (14%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKR-LKDYNIAGGEVQFQTEVETISLAVH 357
S + +G+G FG V+K G VA+K+ L + G + E++ + L H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 358 RNLLRLCGFCSTENERLLVYPY-MPNGSVASRLRDHIHGRPAL--------DWARRKRIA 408
N++ L C T+ PY GS+ H L + KR+
Sbjct: 76 ENVVNLIEICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM 130
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK---LLDHRDSHVTTA 465
GL Y+H KI+HRD+KAAN+L+ D + DFGLA+ L + +
Sbjct: 131 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 187
Query: 466 VRGTVGHIAPE-YLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
T+ + PE L D++G G ++ E+ T R ++ +
Sbjct: 188 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-------------RSPIMQGNTE 234
Query: 525 LHQEGKLSQM---VDKDLKGNFDRIELEEMVQVA 555
HQ +SQ+ + ++ N D EL E +++
Sbjct: 235 QHQLALISQLCGSITPEVWPNVDNYELYEKLELV 268
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 13/208 (6%)
Query: 300 TSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVH 357
T + +G+G F +V + G A K + ++ + Q + E L H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 358 RNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417
N++RL S E LV+ + G L + I R A +L+
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGE----LFEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAV---VGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
H+ ++HRD+K N+LL + + DFGLA + D GT G+++
Sbjct: 119 CHQM---GVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLS 174
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE L + D++ G++L L+ G
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 309 LGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAV---HRNLLRLC 364
LG G F I K AVK I ++ T+ E +L + H N+++L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVK------IISKRMEANTQKEITALKLCEGHPNIVKLH 72
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIH-GRPALDWARRKRIALGTARGLLYLHEQCD 423
+ LV + G + R++ H + RK ++ + ++H D
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVSHMH---D 124
Query: 424 PKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST 480
++HRD+K N+L +++ E + DFG A+L + + T T+ + APE L+
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPELLNQ 183
Query: 481 GQSSEKTDVFGFGILLLELITGQ 503
E D++ G++L +++GQ
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQ 206
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H +T V T +
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYV-ATRWY 195
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H +T V T +
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYV-ATRWY 195
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 26/221 (11%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSDGAL--VAVKRLKDYNIAGGEVQ-------FQT 347
+A + LG G G V K F VA+K + A G + +T
Sbjct: 5 KALRDEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET 63
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRI 407
E+E + H ++++ F E+ +V M G L D + G L A K
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGE----LFDKVVGNKRLKEATCKLY 118
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTT 464
+ YLHE IIHRD+K N+LL +ED + DFG +K+L ++ +
Sbjct: 119 FYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 173
Query: 465 AVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITG 502
+ GT ++APE L T + D + G++L ++G
Sbjct: 174 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ H +T V T +
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYV-ATRWY 195
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y P G + S LR GR AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFXEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+++D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 26/221 (11%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSDGAL--VAVKRLKDYNIAGGEVQ-------FQT 347
+A + LG G G V K F VA+K + A G + +T
Sbjct: 6 KALRDEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET 64
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRI 407
E+E + H ++++ F E+ +V M G L D + G L A K
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGE----LFDKVVGNKRLKEATCKLY 119
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTT 464
+ YLHE IIHRD+K N+LL +ED + DFG +K+L ++ +
Sbjct: 120 FYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 174
Query: 465 AVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITG 502
+ GT ++APE L T + D + G++L ++G
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DF LA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 26/221 (11%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSDGAL--VAVKRLKDYNIAGGEVQ-------FQT 347
+A + LG G G V K F VA+K + A G + +T
Sbjct: 6 KALRDEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET 64
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRI 407
E+E + H ++++ F E+ +V M G L D + G L A K
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGE----LFDKVVGNKRLKEATCKLY 119
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTT 464
+ YLHE IIHRD+K N+LL +ED + DFG +K+L ++ +
Sbjct: 120 FYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 174
Query: 465 AVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITG 502
+ GT ++APE L T + D + G++L ++G
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 26/221 (11%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSDGAL--VAVKRLKDYNIAGGEVQ-------FQT 347
+A + LG G G V K F VA+K + A G + +T
Sbjct: 6 KALRDEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET 64
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRI 407
E+E + H ++++ F E+ +V M G L D + G L A K
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGE----LFDKVVGNKRLKEATCKLY 119
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTT 464
+ YLHE IIHRD+K N+LL +ED + DFG +K+L ++ +
Sbjct: 120 FYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 174
Query: 465 AVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITG 502
+ GT ++APE L T + D + G++L ++G
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + FGLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ M L D I R AL +
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERM---EPVQDLFDFITERGALQEELAR 117
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 118 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 171
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 111/274 (40%), Gaps = 39/274 (14%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKR-LKDYNIAGGEVQFQTEVETISLAVH 357
S + +G+G FG V+K G VA+K+ L + G + E++ + L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 358 RNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPA---------LDWARRKRIA 408
N++ L C T+ PY + + D A + KR+
Sbjct: 77 ENVVNLIEICRTKAS-----PYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM 131
Query: 409 LGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK---LLDHRDSHVTTA 465
GL Y+H KI+HRD+KAAN+L+ D + DFGLA+ L + +
Sbjct: 132 QMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 466 VRGTVGHIAPE-YLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
T+ + PE L D++G G ++ E+ T R ++ +
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-------------RSPIMQGNTE 235
Query: 525 LHQEGKLSQM---VDKDLKGNFDRIELEEMVQVA 555
HQ +SQ+ + ++ N D EL E +++
Sbjct: 236 QHQLALISQLCGSITPEVWPNVDNYELYEKLELV 269
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG V + G A+K L + +++ + I A
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L + +N L +V Y+P G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 35/252 (13%)
Query: 275 VNDQYDPEVSLGHLKRYTFKEL---------RAATSNFSAKNILGRGGFGIVYKGCFSDG 325
+N+ + +SL K + F +L +A + LG G G V K F
Sbjct: 114 LNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEV-KLAFERK 172
Query: 326 AL--VAVKRLKDYNIAGGEVQ-------FQTEVETISLAVHRNLLRLCGFCSTENERLLV 376
VA++ + A G + +TE+E + H ++++ F E+ +V
Sbjct: 173 TCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIV 231
Query: 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANI 436
M G L D + G L A K + YLHE IIHRD+K N+
Sbjct: 232 LELMEGGE----LFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENV 284
Query: 437 LL---DEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVF 490
LL +ED + DFG +K+L ++ + + GT ++APE L T + D +
Sbjct: 285 LLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 342
Query: 491 GFGILLLELITG 502
G++L ++G
Sbjct: 343 SLGVILFICLSG 354
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 26/221 (11%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGCFSDGAL--VAVKRLKDYNIAGGEVQ-------FQT 347
+A + LG G G V K F VA+K + A G + +T
Sbjct: 12 KALRDEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET 70
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRI 407
E+E + H ++++ F E+ +V M G L D + G L A K
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGE----LFDKVVGNKRLKEATCKLY 125
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTT 464
+ YLHE IIHRD+K N+LL +ED + DFG +K+L ++ +
Sbjct: 126 FYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 180
Query: 465 AVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITG 502
+ GT ++APE L T + D + G++L ++G
Sbjct: 181 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG V + G A+K L + +++ + I A
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L + +N L +V Y+P G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + D GLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG V + G A+K L + +++ + I A
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L + +N L +V Y+P G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 14/206 (6%)
Query: 303 FSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEV---QFQTEVETISLAVHRN 359
F K LG G FG V+ L V +K N +V Q + E+E + H N
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERV--IKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 360 LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
++++ + +V G + R+ AL + L Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 420 EQCDPKIIHRDVKAANILLDE---DFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
Q ++H+D+K NIL + + DFGLA+L D H T A GT ++APE
Sbjct: 142 SQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK-SDEHSTNAA-GTALYMAPE 196
Query: 477 YLSTGQSSEKTDVFGFGILLLELITG 502
+ K D++ G+++ L+TG
Sbjct: 197 VFKRDVTF-KCDIWSAGVVMYFLLTG 221
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + D GLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 35/252 (13%)
Query: 275 VNDQYDPEVSLGHLKRYTFKEL---------RAATSNFSAKNILGRGGFGIVYKGCFSDG 325
+N+ + +SL K + F +L +A + LG G G V K F
Sbjct: 100 LNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEV-KLAFERK 158
Query: 326 AL--VAVKRLKDYNIAGGEVQ-------FQTEVETISLAVHRNLLRLCGFCSTENERLLV 376
VA++ + A G + +TE+E + H ++++ F E+ +V
Sbjct: 159 TCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIV 217
Query: 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANI 436
M G L D + G L A K + YLHE IIHRD+K N+
Sbjct: 218 LELMEGGE----LFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENV 270
Query: 437 LL---DEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVF 490
LL +ED + DFG +K+L ++ + + GT ++APE L T + D +
Sbjct: 271 LLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 328
Query: 491 GFGILLLELITG 502
G++L ++G
Sbjct: 329 SLGVILFICLSG 340
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 25 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 84
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR + AR A
Sbjct: 85 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 140
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+DE V DFG AK + R T + GT ++A
Sbjct: 141 FEYLHSL---DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 193
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG V + G A+K L + +++ + I A
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y P G + S LR GR + AR A
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 154
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+++D+ V DFG AK + R T + GT ++A
Sbjct: 155 FEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ D T T +
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE----MTGYVATRWY 186
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+ G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 35/196 (17%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
+GL Y+H ++HRD+K N+ ++ED E + DFGLA+ H D+ +T V T +
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVV-TRWY 207
Query: 473 IAPEY-LSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVML--------DWVK 523
APE LS ++ D++ G ++ E++TG+ +Q +L ++V+
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 267
Query: 524 KLHQEGKLS--QMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVL-KMLEGDG 580
KL+ + S Q + + + +F TQ P P+ +++L KMLE D
Sbjct: 268 KLNDKAAKSYIQSLPQTPRKDF---------------TQLFPRASPQAADLLEKMLELD- 311
Query: 581 LAEKWEASQKIETPRY 596
+ ++ A+Q + P +
Sbjct: 312 VDKRLTAAQALTHPFF 327
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 35/196 (17%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
+GL Y+H ++HRD+K N+ ++ED E + DFGLA+ H D+ +T V T +
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYV-VTRWY 189
Query: 473 IAPEY-LSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVML--------DWVK 523
APE LS ++ D++ G ++ E++TG+ +Q +L ++V+
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 249
Query: 524 KLHQEGKLS--QMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVL-KMLEGDG 580
KL+ + S Q + + + +F TQ P P+ +++L KMLE D
Sbjct: 250 KLNDKAAKSYIQSLPQTPRKDF---------------TQLFPRASPQAADLLEKMLELD- 293
Query: 581 LAEKWEASQKIETPRY 596
+ ++ A+Q + P +
Sbjct: 294 VDKRLTAAQALTHPFF 309
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 118
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 119 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 172
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + D GLA+ H D +T V T +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEMTGYV-ATRWY 188
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+TG+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 132
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 133 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 186
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 146
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 147 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 200
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 132
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 133 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 186
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR A AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFAEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 117
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 118 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 171
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ D T T +
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWY 194
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+ G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 146
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 147 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 200
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 22/222 (9%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALV-AVKRLKDYNI--AGGEVQFQTEVE 350
K++R +F ++GRG FG V + V A+K L + + F+ E +
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNG---SVASRLRDHIHGRPALDWARRKRI 407
+ + + L +N LV Y G ++ S+ D + A + I
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVI 186
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFG-LAKLLDHRDSHVTTAV 466
A+ + L Y +HRD+K NIL+D + + DFG KL++ + AV
Sbjct: 187 AIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV 237
Query: 467 RGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELITGQ 503
GT +I+PE L G+ + D + G+ + E++ G+
Sbjct: 238 -GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 145
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 146 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 199
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 19/220 (8%)
Query: 293 FKELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVE 350
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 351 TISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARR 404
+ + + ++RL + + +L+ + L D I R AL
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELA 117
Query: 405 KRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVT 463
+ + + H C ++HRD+K NIL+D + E + DFG LL +D+ V
Sbjct: 118 RSFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VY 171
Query: 464 TAVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
T GT + PE++ + ++ V+ GILL +++ G
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 15/200 (7%)
Query: 309 LGRGGFGIVYKGCFS--DGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCG 365
LG+G F +V + C G A K + ++ + Q + E L H N++RL
Sbjct: 30 LGKGAFSVVRR-CVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 366 FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK 425
S E L++ + G L + I R A +L+ H+
Sbjct: 89 SISEEGHHYLIFDLVTGGE----LFEDIVAREYYSEADASHCIQQILEAVLHCHQM---G 141
Query: 426 IIHRDVKAANILLDEDFEAV---VGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQ 482
++HRD+K N+LL + + DFGLA ++ + GT G+++PE L
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 483 SSEKTDVFGFGILLLELITG 502
+ D++ G++L L+ G
Sbjct: 201 YGKPVDLWACGVILYILLVG 220
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 145
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 146 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 199
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 19/220 (8%)
Query: 293 FKELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVE 350
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 351 TISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARR 404
+ + + ++RL + + +L+ + L D I R AL
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELA 117
Query: 405 KRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVT 463
+ + + H C ++HRD+K NIL+D + E + DFG LL +D+ V
Sbjct: 118 RSFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VY 171
Query: 464 TAVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
T GT + PE++ + ++ V+ GILL +++ G
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 146
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 147 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 200
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 145
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 146 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 199
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472
RGL Y+H IIHRD+K +N+ ++ED E + DFGLA+ D T T +
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWY 194
Query: 473 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 503
APE L+ ++ D++ G ++ EL+ G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 146
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 147 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 200
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 145
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 146 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 199
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 133
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 134 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 187
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 140
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 141 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 194
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 133
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 134 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 187
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 152
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 153 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 206
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 133
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 134 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 187
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 24/232 (10%)
Query: 289 KRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGA------LVAVKRLKDYNIAGGE 342
K+ KE+ + F + LG FG VYKG A VA+K LKD
Sbjct: 16 KQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 343 VQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRL------------R 390
+F+ E + H N++ L G + + +++ Y +G + L
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 391 DHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFG 450
D + AL+ + A G+ YL ++H+D+ N+L+ + + D G
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLG 190
Query: 451 LAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
L + + D + + + +APE + G+ S +D++ +G++L E+ +
Sbjct: 191 LFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 160
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 161 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 214
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 295 ELRAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIA----GGEVQFQTEV 349
++++ + + LG G F VYK + +VA+K++K + + G E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 350 ETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIAL 409
+ + H N++ L ++ LV+ +M + ++D+ L + K L
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDN---SLVLTPSHIKAYML 119
Query: 410 GTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGT 469
T +GL YLH+ I+HRD+K N+LLDE+ + DFGLAK + V T
Sbjct: 120 MTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-T 175
Query: 470 VGHIAPEYLSTGQS-SEKTDVFGFGILLLELI 500
+ APE L + D++ G +L EL+
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 160
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 161 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 214
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVET 351
KE S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 352 ISLAVHR------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRK 405
+ + + ++RL + + +L+ + L D I R AL +
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELAR 165
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTT 464
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 166 SFFWQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYT 219
Query: 465 AVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
GT + PE++ + ++ V+ GILL +++ G
Sbjct: 220 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAGGEVQFQTEVETI 352
K+ A + + +LG+GGFG V+ G +D VA+K + + G + +
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 353 SLAV---------HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWAR 403
+A+ H ++RL + T+ +LV + A L D+I + L
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLV---LERPLPAQDLFDYITEKGPLGEGP 140
Query: 404 RKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD-EDFEAVVGDFGLAKLLDHRDSHV 462
+ + + H + ++HRD+K NIL+D A + DFG LL H + +
Sbjct: 141 SRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPY- 195
Query: 463 TTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELITG 502
T GT + PE++S Q + V+ GILL +++ G
Sbjct: 196 -TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 39 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR + AR A
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 154
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 155 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 33 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 92
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR AR A
Sbjct: 93 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARF--YAAQIVLT 148
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 149 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 201
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 59 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR + AR A
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 174
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK R T + GT ++A
Sbjct: 175 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGATWTLCGTPEYLA 227
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+++D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 141 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 132 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 130/322 (40%), Gaps = 53/322 (16%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVK---RLKDYNIAGGEVQFQTEVE 350
KE++ +F ++GRG FG V A+V +K R+ I + + E
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEV--------AVVKMKNTERIYAMKILN-KWEMLKRAE 133
Query: 351 TISLAVHRNLLRLCGFCS----------TENERLLVYPYMPNG---SVASRLRDHIHGRP 397
T R++L + G C EN LV Y G ++ S+ D +
Sbjct: 134 TACFREERDVL-VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDM 192
Query: 398 ALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457
A + +A+ + L Y +HRD+K N+LLD + + DFG ++
Sbjct: 193 ARFYIGEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMND 243
Query: 458 RDSHVTTAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELITGQRALDFGRAA 512
+ ++ GT +I+PE L G+ + D + G+ + E++ G+
Sbjct: 244 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 303
Query: 513 NQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEV 572
G +++ ++ ++ + + E ++++Q L+C++ L + + +
Sbjct: 304 ETYGKIMNHEERFQFPSHVTDVSE----------EAKDLIQ-RLICSRERRLGQNGIEDF 352
Query: 573 LKMLEGDGLAEKWEASQKIETP 594
K +GL WE + +E P
Sbjct: 353 KKHAFFEGL--NWENIRNLEAP 372
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 309 LGRGGFGIVYK-GCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
LGRG +G+V K G ++AVKR++ + + + +++ V C F
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD------CPFT 112
Query: 368 ST-------ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
T E + + M + S+ + I + +IA+ + L +LH
Sbjct: 113 VTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 171
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEY--- 477
+ +IHRDVK +N+L++ + + DFG++ L DS T G ++APE
Sbjct: 172 KLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTIDAGCKPYMAPERINP 227
Query: 478 -LSTGQSSEKTDVFGFGILLLEL 499
L+ S K+D++ GI ++EL
Sbjct: 228 ELNQKGYSVKSDIWSLGITMIEL 250
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 95/228 (41%), Gaps = 24/228 (10%)
Query: 293 FKELRAATSNFSAKNILGRGGFGIVYKGCFSDGA------LVAVKRLKDYNIAGGEVQFQ 346
KE+ + F + LG FG VYKG A VA+K LKD +F+
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 347 TEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRL------------RDHIH 394
E + H N++ L G + + +++ Y +G + L D
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 395 GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454
+ AL+ + A G+ YL ++H+D+ N+L+ + + D GL +
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 455 LDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 501
+ D + + + +APE + G+ S +D++ +G++L E+ +
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 59 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR AR A
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARF--YAAQIVLT 174
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 175 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 227
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHR 358
S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V + + +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 359 ------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTA 412
++RL + + +L+ + L D I R AL +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTTAVRGTVG 471
+ + H + ++HRD+K NIL+D + E + DFG LL +D+ V T GT
Sbjct: 121 EAVRHCH---NXGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRV 174
Query: 472 HIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
+ PE++ + ++ V+ GILL +++ G
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 130/322 (40%), Gaps = 53/322 (16%)
Query: 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVK---RLKDYNIAGGEVQFQTEVE 350
KE++ +F ++GRG FG V A+V +K R+ I + + E
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEV--------AVVKMKNTERIYAMKILN-KWEMLKRAE 117
Query: 351 TISLAVHRNLLRLCGFCS----------TENERLLVYPYMPNG---SVASRLRDHIHGRP 397
T R++L + G C EN LV Y G ++ S+ D +
Sbjct: 118 TACFREERDVL-VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDM 176
Query: 398 ALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457
A + +A+ + L Y +HRD+K N+LLD + + DFG ++
Sbjct: 177 ARFYIGEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMND 227
Query: 458 RDSHVTTAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELITGQRALDFGRAA 512
+ ++ GT +I+PE L G+ + D + G+ + E++ G+
Sbjct: 228 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
Query: 513 NQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEV 572
G +++ ++ ++ + + E ++++Q L+C++ L + + +
Sbjct: 288 ETYGKIMNHEERFQFPSHVTDVSE----------EAKDLIQ-RLICSRERRLGQNGIEDF 336
Query: 573 LKMLEGDGLAEKWEASQKIETP 594
K +GL WE + +E P
Sbjct: 337 KKHAFFEGL--NWENIRNLEAP 356
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 143 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 35/189 (18%)
Query: 37 ALVAVKNNLHDPYNVLENWDITSVDPC--SWRMITCSPDGY--------VSALGLPS--- 83
AL+ +K +L +P L +W + + D C +W + C D +S L LP
Sbjct: 10 ALLQIKKDLGNP-TTLSSW-LPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYP 67
Query: 84 -------------------QSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKL 124
+L G + P I LT+L + + + + G IP L +++ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 125 QTLDLSNNKFTGEIPDSLGDXXXXXXXXXXXXXXTGSCPESLSKIESL-TLVDLSYNNLS 183
TLD S N +G +P S+ +G+ P+S L T + +S N L+
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 184 GSLPKISAR 192
G +P A
Sbjct: 188 GKIPPTFAN 196
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 94 IGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIP 139
+G L + L+NN I G +P L +L+ L +L++S N GEIP
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHR 358
S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V + + +
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 359 ------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTA 412
++RL + + +L+ + L D I R AL +
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVL 123
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTTAVRGTVG 471
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T GT
Sbjct: 124 EAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRV 177
Query: 472 HIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
+ PE++ + ++ V+ GILL +++ G
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHR 358
S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V + + +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 359 ------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTA 412
++RL + + +L+ + L D I R AL +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTTAVRGTVG 471
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T GT
Sbjct: 121 EAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRV 174
Query: 472 HIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
+ PE++ + ++ V+ GILL +++ G
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV--TTAVRGTV 470
RGL Y+H ++HRD+K +N+L++ + + DFGLA++ D H T T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 301 SNFSAKNILGRGGFGIVYKGC-FSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHR 358
S + +LG GGFG VY G SD VA+K ++ I+ GE+ T V + + +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 359 ------NLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTA 412
++RL + + +L+ + L D I R AL +
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHRDSHVTTAVRGTVG 471
+ + H C ++HRD+K NIL+D + E + DFG LL +D+ V T GT
Sbjct: 121 EAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRV 174
Query: 472 HIAPEYLSTGQSSEKT-DVFGFGILLLELITG 502
+ PE++ + ++ V+ GILL +++ G
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT +A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEALA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
PE + + ++ D + G+L+ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 21/212 (9%)
Query: 300 TSNFSAKNILGRGGFGIVYK------GCFSDGALVAVKRLKDYNIAGGEVQFQTEVETIS 353
T + LG+G F +V + G ++ K+L A + + E
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS----ARDHQKLEREARICR 65
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
L H N++RL S E L++ + G L + I R A
Sbjct: 66 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGE----LFEDIVAREYYSEADASHCIQQILE 121
Query: 414 GLLYLHEQCDPKIIHRDVKAANILLDEDFEAV---VGDFGLAKLLDHRDSHVTTAVRGTV 470
+L+ H+ ++HR++K N+LL + + DFGLA ++ + GT
Sbjct: 122 AVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTP 177
Query: 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
G+++PE L + D++ G++L L+ G
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 90/226 (39%), Gaps = 43/226 (19%)
Query: 295 ELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL 354
E R + + LGRG FG V+ R+KD FQ V+ + L
Sbjct: 66 EYREEVHWMTHQPRLGRGSFGEVH-------------RMKDKQTG-----FQCAVKKVRL 107
Query: 355 AVHR--NLLRLCGFCST----------ENERLLVYPYMPNGSVASRLRDHIHGRPALDWA 402
V R L+ G S E + ++ + G +L + P
Sbjct: 108 EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---- 163
Query: 403 RRKRIALGTA-RGLLYLHEQCDPKIIHRDVKAANILLDED-FEAVVGDFGLAKLL--DHR 458
R LG A GL YLH + +I+H DVKA N+LL D A + DFG A L D
Sbjct: 164 DRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 220
Query: 459 DSHVTTA--VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+ T + GT H+APE + K D++ ++L ++ G
Sbjct: 221 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 23/213 (10%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCFSD-------GALVAVKRLKDYNIAGGEVQFQTEVETI 352
T ++ LG+G F +V + C ++ K+L A + + E
Sbjct: 30 TDDYQLFEELGKGAFSVV-RRCVKKTPTQEYAAKIINTKKLS----ARDHQKLEREARIC 84
Query: 353 SLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTA 412
L H N++RL S E LV+ + G L + I R A
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE----LFEDIVAREYYSEADASHCIHQIL 140
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV---VGDFGLAKLLDHRDSHVTTAVRGT 469
+ ++H+ I+HRD+K N+LL + + DFGLA + + GT
Sbjct: 141 ESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGT 196
Query: 470 VGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
G+++PE L + D++ G++L L+ G
Sbjct: 197 PGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCFS--DGALVAVKRLKDYNIAGGEVQFQTEVETIS---- 353
T+ F +G G FG V+K C DG + A+KR K G V Q + +
Sbjct: 6 TTEFHELEKIGSGEFGSVFK-CVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAV 62
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
L H +++R + ++ L+ Y GS+A + ++ A K + L R
Sbjct: 63 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 122
Query: 414 GLLYLHEQCDPKIIHRDVKAANILL 438
GL Y+H ++H D+K +NI +
Sbjct: 123 GLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCFS--DGALVAVKRLKDYNIAGGEVQFQTEVETIS---- 353
T+ F +G G FG V+K C DG + A+KR K G V Q + +
Sbjct: 8 TTEFHELEKIGSGEFGSVFK-CVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAV 64
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
L H +++R + ++ L+ Y GS+A + ++ A K + L R
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 414 GLLYLHEQCDPKIIHRDVKAANILL 438
GL Y+H ++H D+K +NI +
Sbjct: 125 GLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCFS--DGALVAVKRLKDYNIAGGEVQFQTEVETIS---- 353
T+ F +G G FG V+K C DG + A+KR K G V Q + +
Sbjct: 8 TTEFHELEKIGSGEFGSVFK-CVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAV 64
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
L H +++R + ++ L+ Y GS+A + ++ A K + L R
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 414 GLLYLHEQCDPKIIHRDVKAANILL 438
GL Y+H ++H D+K +NI +
Sbjct: 125 GLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCFS--DGALVAVKRLKDYNIAGGEVQFQTEVETIS---- 353
T+ F +G G FG V+K C DG + A+KR K G V Q + +
Sbjct: 10 TTEFHELEKIGSGEFGSVFK-CVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAV 66
Query: 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413
L H +++R + ++ L+ Y GS+A + ++ A K + L R
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 414 GLLYLHEQCDPKIIHRDVKAANILL 438
GL Y+H ++H D+K +NI +
Sbjct: 127 GLRYIHSMS---LVHMDIKPSNIFI 148
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 409 LGTA-RGLLYLHEQCDPKIIHRDVKAANILLDED-FEAVVGDFGLAKLLDH----RDSHV 462
LG A GL YLH + +I+H DVKA N+LL D A + DFG A L +D
Sbjct: 172 LGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT 228
Query: 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+ GT H+APE + K DV+ ++L ++ G
Sbjct: 229 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 15/200 (7%)
Query: 309 LGRGGFGIVYKGCFS--DGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCG 365
LG+G F +V + C G A K + ++ + Q + E L H N++RL
Sbjct: 12 LGKGAFSVVRR-CMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 366 FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK 425
S E LV+ + G L + I R A + + H
Sbjct: 71 SISEEGFHYLVFDLVTGGE----LFEDIVAREYYSEADASHCIQQILESVNHCHLN---G 123
Query: 426 IIHRDVKAANILLDEDFEAV---VGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQ 482
I+HRD+K N+LL + + DFGLA + D GT G+++PE L
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 483 SSEKTDVFGFGILLLELITG 502
+ D++ G++L L+ G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 307 NILGRGGFGIVYKGCFS--DGALVAVK--RLKDYNIAGG--EVQFQTEVETISLAVHRNL 360
++G+G F +V + C + G AVK + + + G + E + H ++
Sbjct: 30 EVIGKGAFSVVRR-CINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 361 LRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
+ L S++ +V+ +M + I R + + +A R +L
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFE----IVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 421 QC-DPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTTAVR-GTVGHIAP 475
C D IIHRDVK N+LL + +GDFG+A L +S + R GT +AP
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG--ESGLVAGGRVGTPHFMAP 202
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITG 502
E + + DV+G G++L L++G
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 309 LGRGGFGIVYKGCFSDG-ALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
+G G +G V+K + +VA+KR++ D + G E+ + H+N++RL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
++ + LV+ + + D +G LD K +GL + H + +
Sbjct: 70 LHSDKKLTLVFEFCDQD--LKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHSR---NV 122
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQ-SSE 485
+HRD+K N+L++ + E + DFGLA+ +A T+ + P+ L + S
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFG-IPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 486 KTDVFGFGILLLELITGQRAL 506
D++ G + EL R L
Sbjct: 182 SIDMWSAGCIFAELANAARPL 202
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 14/208 (6%)
Query: 298 AATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA 355
A F LG G FG ++ G A+K L + +++ + I A
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 356 VHRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
V+ L F +N L +V Y+ G + S LR GR + AR A
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARF--YAAQIVLT 153
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
YLH +I+RD+K N+L+D+ V DFG AK + R T + GT ++A
Sbjct: 154 FEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 475 PEYLSTGQSSEKTDVFGFGILLLELITG 502
P + + ++ D + G+L+ E+ G
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 309 LGRGGFGIVYKGCFSD--GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
LGRG F +V + C S G A K LK G + + + E L + ++ R+
Sbjct: 37 LGRGKFAVV-RQCISKSTGQEYAAKFLKKRR-RGQDCRAEILHEIAVLELAKSCPRVINL 94
Query: 367 CST-EN--ERLLVYPYMPNGSVAS----RLRDHIHGRPALDWARRKRIALGTARGLLYLH 419
EN E +L+ Y G + S L + + + R+ G+ YLH
Sbjct: 95 HEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVI------RLIKQILEGVYYLH 148
Query: 420 EQCDPKIIHRDVKAANILLDEDF---EAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPE 476
+ I+H D+K NILL + + + DFG+++ + H + + GT ++APE
Sbjct: 149 QN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH--ACELREIMGTPEYLAPE 203
Query: 477 YLSTGQSSEKTDVFGFGILLLELIT 501
L+ + TD++ GI+ L+T
Sbjct: 204 ILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 15/211 (7%)
Query: 298 AATSNFSAKNILGRGGFGIVYKGCFS--DGALVAVKRLKDYNIAGGEVQ-FQTEVETISL 354
+ T + LG+G F +V + C G A K + ++ + Q + E L
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRR-CMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRL 59
Query: 355 AVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG 414
H N++RL S E LV+ + G L + I R A
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGE----LFEDIVAREYYSEADASHCIQQILES 115
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAV---VGDFGLAKLLDHRDSHVTTAVRGTVG 471
+ + H I+HRD+K N+LL + + DFGLA + D GT G
Sbjct: 116 VNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPG 171
Query: 472 HIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+++PE L + D++ G++L L+ G
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 87/214 (40%), Gaps = 25/214 (11%)
Query: 300 TSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAG---------GEVQFQTEV 349
+ +S + LG G FG V+ + V VK +K + G+V E+
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL--EI 80
Query: 350 ETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRI-- 407
+S H N++++ + LV M L I P LD I
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLV---MEKHGSGLDLFAFIDRHPRLDEPLASYIFR 137
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVR 467
L +A G L L + IIHRD+K NI++ EDF + DFG A L+ T
Sbjct: 138 QLVSAVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC-- 190
Query: 468 GTVGHIAPEYL-STGQSSEKTDVFGFGILLLELI 500
GT+ + APE L + +++ G+ L L+
Sbjct: 191 GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 90/226 (39%), Gaps = 43/226 (19%)
Query: 295 ELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL 354
E R + + +GRG FG V+ R+KD FQ V+ + L
Sbjct: 68 EYREEVHWMTHQPRVGRGSFGEVH-------------RMKDKQTG-----FQCAVKKVRL 109
Query: 355 AVHR--NLLRLCGFCST----------ENERLLVYPYMPNGSVASRLRDHIHGRPALDWA 402
V R L+ G S E + ++ + G +L + P
Sbjct: 110 EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---- 165
Query: 403 RRKRIALGTA-RGLLYLHEQCDPKIIHRDVKAANILLDED-FEAVVGDFGLAKLL--DHR 458
R LG A GL YLH + +I+H DVKA N+LL D A + DFG A L D
Sbjct: 166 DRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 222
Query: 459 DSHVTTA--VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+ T + GT H+APE + K D++ ++L ++ G
Sbjct: 223 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 90/226 (39%), Gaps = 43/226 (19%)
Query: 295 ELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL 354
E R + + +GRG FG V+ R+KD FQ V+ + L
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVH-------------RMKDKQTG-----FQCAVKKVRL 93
Query: 355 AVHR--NLLRLCGFCST----------ENERLLVYPYMPNGSVASRLRDHIHGRPALDWA 402
V R L+ G S E + ++ + G +L + P
Sbjct: 94 EVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---- 149
Query: 403 RRKRIALGTA-RGLLYLHEQCDPKIIHRDVKAANILLDED-FEAVVGDFGLAKLL--DHR 458
R LG A GL YLH + +I+H DVKA N+LL D A + DFG A L D
Sbjct: 150 DRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206
Query: 459 DSHVTTA--VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+ T + GT H+APE + K D++ ++L ++ G
Sbjct: 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 413 RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL--DHRDSHVTTAVRGTV 470
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 471 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 503
+ APE + + K+ D++ G +L E+++ +
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Query: 302 NFSAKNILGRGGFGIVY----KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVH 357
N+ K+++GRG +G VY K + A+ V R+ + I + E+ ++
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRIL--REITILNRLKS 86
Query: 358 RNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417
++RL E+ Y+ S L+ L K I G +
Sbjct: 87 DYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD-HRDSHVTT 464
+HE IIHRD+K AN LL++D + DFGLA+ ++ +D H+
Sbjct: 147 IHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVN 191
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 97/245 (39%), Gaps = 22/245 (8%)
Query: 294 KELRAATSNFSAKNILGRGGFG-IVYKGCFSDGALVAVKRLKDYN-IAGGEVQ-FQTEVE 350
KE+R +F ++GRG F + G + A+K + ++ + GEV F+ E +
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 351 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNG---SVASRLRDHIHGRPALDWARRKRI 407
+ R + +L EN LV Y G ++ S+ + I A + +
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVM 173
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVR 467
A+ + L Y +HRD+K NILLD + DFG L + +
Sbjct: 174 AIDSVHRLGY---------VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV 224
Query: 468 GTVGHIAPEYLST-------GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD 520
GT +++PE L G + D + G+ E+ GQ A G ++
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH 284
Query: 521 WVKKL 525
+ + L
Sbjct: 285 YKEHL 289
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 409 LGTA-RGLLYLHEQCDPKIIHRDVKAANILLDED-FEAVVGDFGLAKLL--DHRDSHVTT 464
LG A GL YLH + +I+H DVKA N+LL D A + DFG A L D + T
Sbjct: 191 LGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLT 247
Query: 465 A--VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+ GT H+APE + K DV+ ++L ++ G
Sbjct: 248 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 85/202 (42%), Gaps = 20/202 (9%)
Query: 309 LGRGGFG--IVYKGCFSDGALVAVKRLKDYNIA--GGEVQFQTEVETISLAVHRNLLRLC 364
LG G +G ++ K + GA A+K +K ++ EV + H N+++L
Sbjct: 29 LGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
F + LV G L D I R I G YLH+
Sbjct: 88 EFFEDKRNYYLVMEVYRGGE----LFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH--- 140
Query: 425 KIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTTAVR-GTVGHIAPEYLST 480
I+HRD+K N+LL+ D + DFGL+ H + R GT +IAPE L
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSA---HFEVGGKMKERLGTAYYIAPEVLRK 197
Query: 481 GQSSEKTDVFGFGILLLELITG 502
+ EK DV+ G++L L+ G
Sbjct: 198 -KYDEKCDVWSCGVILYILLCG 218
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 297 RAATSNFSAKNILGRGGFGIVYKGC-FSDGALVAVKR-LKDYNIAGGEVQFQTEVETISL 354
R F + + G+G FG V G S G VA+K+ ++D E+Q ++ +
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLH- 77
Query: 355 AVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARR---------K 405
H N+++L + T ER Y+ V + D +H R ++ RR K
Sbjct: 78 --HPNIVQLQSYFYTLGERDRRDIYL--NVVMEYVPDTLH-RCCRNYYRRQVAPPPILIK 132
Query: 406 RIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE-DFEAVVGDFGLAKLLDHRDSHVTT 464
R + LH + HRD+K N+L++E D + DFG AK L + +V
Sbjct: 133 VFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV-- 189
Query: 465 AVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523
A + + APE + Q + D++ G + E++ G+ R N G + + V+
Sbjct: 190 AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF---RGDNSAGQLHEIVR 246
Query: 524 KL 525
L
Sbjct: 247 VL 248
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 85/202 (42%), Gaps = 20/202 (9%)
Query: 309 LGRGGFG--IVYKGCFSDGALVAVKRLKDYNIA--GGEVQFQTEVETISLAVHRNLLRLC 364
LG G +G ++ K + GA A+K +K ++ EV + H N+++L
Sbjct: 12 LGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
F + LV G L D I R I G YLH+
Sbjct: 71 EFFEDKRNYYLVMEVYRGGE----LFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH--- 123
Query: 425 KIIHRDVKAANILLD---EDFEAVVGDFGLAKLLDHRDSHVTTAVR-GTVGHIAPEYLST 480
I+HRD+K N+LL+ D + DFGL+ H + R GT +IAPE L
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSA---HFEVGGKMKERLGTAYYIAPEVLRK 180
Query: 481 GQSSEKTDVFGFGILLLELITG 502
+ EK DV+ G++L L+ G
Sbjct: 181 -KYDEKCDVWSCGVILYILLCG 201
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 129/309 (41%), Gaps = 46/309 (14%)
Query: 283 VSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGE 342
V LG Y F+ + +S +G GG V++ + A+K + N+ +
Sbjct: 11 VDLGTENLY-FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYV---NLEEAD 66
Query: 343 VQ----FQTEVETIS-LAVHRN-LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR 396
Q ++ E+ ++ L H + ++RL + T+ +Y M G++ L + +
Sbjct: 67 NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNID--LNSWLKKK 121
Query: 397 PALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456
++D RK + +H+ I+H D+K AN L+ + ++ DFG+A +
Sbjct: 122 KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQ 177
Query: 457 HRDSHVTTAVR-GTVGHIAPEYLSTGQSSEKT-----------DVFGFGILLLELITGQR 504
+ V + GTV ++ PE + SS + DV+ G +L + G+
Sbjct: 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 237
Query: 505 ALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPL 564
F + NQ + KLH ++D + + F I +++ V C + +P
Sbjct: 238 P--FQQIINQ-------ISKLH------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 282
Query: 565 HRPKMSEVL 573
R + E+L
Sbjct: 283 QRISIPELL 291
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 417 YLHEQCDPKIIHRDVKAANIL-LDEDFEAV---VGDFGLAKLLDHRDSHVTTAVRGTVGH 472
YLH Q ++HRD+K +NIL +DE + DFG AK L + + T T
Sbjct: 136 YLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANF 191
Query: 473 IAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+APE L E D++ GILL ++ G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 309 LGRGGFGIVYKGCFSDG-ALVAVKRLK-DYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
+G G +G V+K + +VA+KR++ D + G E+ + H+N++RL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
++ + LV+ + + D +G LD K +GL + H + +
Sbjct: 70 LHSDKKLTLVFEFCDQD--LKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHSR---NV 122
Query: 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQ-SSE 485
+HRD+K N+L++ + E + +FGLA+ +A T+ + P+ L + S
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFG-IPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 486 KTDVFGFGILLLELITGQRAL 506
D++ G + EL R L
Sbjct: 182 SIDMWSAGCIFAELANAGRPL 202
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 417 YLHEQCDPKIIHRDVKAANIL-LDEDFEAV---VGDFGLAKLLDHRDSHVTTAVRGTVGH 472
YLH Q ++HRD+K +NIL +DE + DFG AK L + + T T
Sbjct: 136 YLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANF 191
Query: 473 IAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+APE L E D++ GILL ++ G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 417 YLHEQCDPKIIHRDVKAANIL-LDE--DFEAV-VGDFGLAKLLDHRDSHVTTAVRGTVGH 472
YLH Q ++HRD+K +NIL +DE + E++ + DFG AK L + + T T
Sbjct: 131 YLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANF 186
Query: 473 IAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+APE L D++ G+LL ++TG
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG-- 177
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
S + T T + APE + E D++ G+++ E+I G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG-- 177
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
S + T T + APE + E D++ G+++ E+I G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 17/205 (8%)
Query: 303 FSAKNILGRGGFGIVYKGCFSDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNL 360
++ +N +GRG +G V K G + A K++ Y + + +F+ E+E + H N+
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVD-RFKQEIEIMKSLDHPNI 85
Query: 361 LRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
+RL + LV G + R+ +H R + RI + Y H+
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGELFERV---VHKR-VFRESDAARIMKDVLSAVAYCHK 141
Query: 421 QCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEY 477
+ HRD+K N L D + DFGLA + + GT +++P+
Sbjct: 142 L---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTKVGTPYYVSPQV 196
Query: 478 LSTGQSSEKTDVFGFGILLLELITG 502
L G + D + G+++ L+ G
Sbjct: 197 LE-GLYGPECDEWSAGVMMYVLLCG 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 17/205 (8%)
Query: 303 FSAKNILGRGGFGIVYKGCFSDGALV--AVKRLKDYNIAGGEVQFQTEVETISLAVHRNL 360
++ +N +GRG +G V K G + A K++ Y + + +F+ E+E + H N+
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVD-RFKQEIEIMKSLDHPNI 68
Query: 361 LRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
+RL + LV G + R+ +H R + RI + Y H+
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELFERV---VHKR-VFRESDAARIMKDVLSAVAYCHK 124
Query: 421 QCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEY 477
+ HRD+K N L D + DFGLA + + GT +++P+
Sbjct: 125 L---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTKVGTPYYVSPQV 179
Query: 478 LSTGQSSEKTDVFGFGILLLELITG 502
L G + D + G+++ L+ G
Sbjct: 180 LE-GLYGPECDEWSAGVMMYVLLCG 203
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 23/233 (9%)
Query: 295 ELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQT------- 347
EL A S ++ + + G +G V G S+G VA+KR+ + G V +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 348 ---EVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARR 404
E+ ++ H N+L L E + Y+ + + L IH + +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV--ISP 133
Query: 405 KRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTT 464
+ I LL LH + ++HRD+ NILL ++ + + DF LA+ D D++ T
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-EDTADANKTH 192
Query: 465 AVRGTVGHIAPEYLSTGQSSEK-TDVFGFGILLLELITGQRALDFGRAANQRG 516
V + APE + + K D++ G ++ E+ F R A RG
Sbjct: 193 YVTHR-WYRAPELVMQFKGFTKLVDMWSAGCVMAEM--------FNRKALFRG 236
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 309 LGRGGFGIVYK-GCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC 367
LGRG +G+V K G ++AVKR++ + + + +++ V C F
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD------CPFT 68
Query: 368 ST-------ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
T E + + M + S+ + I + +IA+ + L +LH
Sbjct: 69 VTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 127
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEY--- 477
+ +IHRDVK +N+L++ + + DFG++ L D G ++APE
Sbjct: 128 KL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKDIDAGCKPYMAPERINP 183
Query: 478 -LSTGQSSEKTDVFGFGILLLEL 499
L+ S K+D++ GI ++EL
Sbjct: 184 ELNQKGYSVKSDIWSLGITMIEL 206
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 23/233 (9%)
Query: 295 ELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQT------- 347
EL A S ++ + + G +G V G S+G VA+KR+ + G V +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 348 ---EVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARR 404
E+ ++ H N+L L E + Y+ + + L IH + +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV--ISP 133
Query: 405 KRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTT 464
+ I LL LH + ++HRD+ NILL ++ + + DF LA+ D D++ T
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-EDTADANKTH 192
Query: 465 AVRGTVGHIAPEYLSTGQSSEK-TDVFGFGILLLELITGQRALDFGRAANQRG 516
V + APE + + K D++ G ++ E+ F R A RG
Sbjct: 193 YVTHR-WYRAPELVMQFKGFTKLVDMWSAGCVMAEM--------FNRKALFRG 236
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 128/309 (41%), Gaps = 46/309 (14%)
Query: 283 VSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGE 342
V LG Y F+ + +S +G GG V++ + A+K + N+ +
Sbjct: 11 VDLGTENLY-FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYV---NLEEAD 66
Query: 343 VQ----FQTEVETIS-LAVHRN-LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR 396
Q ++ E+ ++ L H + ++RL + T+ +Y M G++ L + +
Sbjct: 67 NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNID--LNSWLKKK 121
Query: 397 PALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456
++D RK + +H+ I+H D+K AN L+ + ++ DFG+A +
Sbjct: 122 KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQ 177
Query: 457 HRDSHVTTAVR-GTVGHIAPEYLSTGQSSEKT-----------DVFGFGILLLELITGQR 504
V + GTV ++ PE + SS + DV+ G +L + G+
Sbjct: 178 PDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 237
Query: 505 ALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPL 564
F + NQ + KLH ++D + + F I +++ V C + +P
Sbjct: 238 P--FQQIINQ-------ISKLH------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 282
Query: 565 HRPKMSEVL 573
R + E+L
Sbjct: 283 QRISIPELL 291
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 21/155 (13%)
Query: 309 LGRGGFGIVYKGCFS-DGALVAVKRLK----DYNIAGGEVQFQTEVETISLAVHRNLLRL 363
LG G +G VYK + VA+KR++ + + G ++ EV + HRN++ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR---EVSLLKELQHRNIIEL 98
Query: 364 CGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCD 423
+ L++ Y N L+ ++ P + K G+ + H +
Sbjct: 99 KSVIHHNHRLHLIFEYAEND-----LKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR-- 151
Query: 424 PKIIHRDVKAANILL-----DEDFEAVVGDFGLAK 453
+ +HRD+K N+LL E +GDFGLA+
Sbjct: 152 -RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 122/289 (42%), Gaps = 45/289 (15%)
Query: 303 FSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ----FQTEVETIS-LAVH 357
+S +G GG V++ + A+K + N+ + Q ++ E+ ++ L H
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYV---NLEEADNQTLDSYRNEIAYLNKLQQH 70
Query: 358 RN-LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
+ ++RL + T+ +Y M G++ L + + ++D RK +
Sbjct: 71 SDKIIRLYDYEITDQ---YIYMVMECGNI--DLNSWLKKKKSIDPWERKSYWKNMLEAVH 125
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVR-GTVGHIAP 475
+H+ I+H D+K AN L+ + ++ DFG+A + + V + GTV ++ P
Sbjct: 126 TIHQH---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPP 181
Query: 476 EYLSTGQSSEKT-----------DVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E + SS + DV+ G +L + G+ F + NQ + K
Sbjct: 182 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQ-------ISK 232
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVL 573
LH ++D + + F I +++ V C + +P R + E+L
Sbjct: 233 LH------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 177
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
S + T T + APE + E D++ G ++ E+I G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 30/115 (26%)
Query: 414 GLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDS------------- 460
G+ Y+H I+HRD+K AN L+++D V DFGLA+ +D+ ++
Sbjct: 168 GVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 461 -------HVTTAVRGTVGHI------APEYLSTGQS-SEKTDVFGFGILLLELIT 501
H R GH+ APE + ++ +E DV+ G + EL+
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 178
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
S + T T + APE + E D++ G ++ E+I G
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433
L+V + G + SR++D G A I + YLH I HRDVK
Sbjct: 97 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP 151
Query: 434 ANILLDEDFEAVV---GDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 490
N+L + DFG AK +S T T ++APE L + + D++
Sbjct: 152 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMW 209
Query: 491 GFGILLLELITG 502
G+++ L+ G
Sbjct: 210 SLGVIMYILLCG 221
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433
L+V + G + SR++D G A I + YLH I HRDVK
Sbjct: 96 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP 150
Query: 434 ANILLDEDFEAVV---GDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 490
N+L + DFG AK +S T T ++APE L + + D++
Sbjct: 151 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMW 208
Query: 491 GFGILLLELITG 502
G+++ L+ G
Sbjct: 209 SLGVIMYILLCG 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433
L+V + G + SR++D G A I + YLH I HRDVK
Sbjct: 95 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP 149
Query: 434 ANILLDEDFEAVV---GDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 490
N+L + DFG AK +S T T ++APE L + + D++
Sbjct: 150 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMW 207
Query: 491 GFGILLLELITG 502
G+++ L+ G
Sbjct: 208 SLGVIMYILLCG 219
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 28/214 (13%)
Query: 307 NILGRGGFGIVYKGCFS--DGALVAVKRLKDYNIAGGEVQFQTEVETI-SLAVHRNLLRL 363
+LG G + V +G S +G AVK ++ F+ EVET+ ++N+L L
Sbjct: 19 ELLGEGAYAKV-QGAVSLQNGKEYAVKIIEKQAGHSRSRVFR-EVETLYQCQGNKNILEL 76
Query: 364 CGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCD 423
F + LV+ + GS+ + HI + + R+ A L +LH +
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILA----HIQKQKHFNEREASRVVRDVAAALDFLHTK-- 130
Query: 424 PKIIHRDVKAANILLD--EDFEAV-VGDFGLAKLLDHRDS-------HVTTAVRGTVGHI 473
I HRD+K NIL + E V + DF L + +S +TT G+ ++
Sbjct: 131 -GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC-GSAEYM 188
Query: 474 APEYLS--TGQSS---EKTDVFGFGILLLELITG 502
APE + T Q++ ++ D++ G++L +++G
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 177
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
S + T T + APE + E D++ G ++ E+I G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 302 NFSAKNILGRGGFGIVY----KGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVH 357
N+ K+++GRG +G VY K + A+ V R+ + I + E+ ++
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRIL--REITILNRLKS 84
Query: 358 RNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417
++RL ++ Y+ S L+ L K I G +
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 418 LHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD-HRDSHVTT 464
+HE IIHRD+K AN LL++D V DFGLA+ ++ +D+++
Sbjct: 145 IHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVN 189
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433
L+V + G + SR++D G A I + YLH I HRDVK
Sbjct: 105 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP 159
Query: 434 ANILLDEDFEAVV---GDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 490
N+L + DFG AK +S T T ++APE L + + D++
Sbjct: 160 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMW 217
Query: 491 GFGILLLELITG 502
G+++ L+ G
Sbjct: 218 SLGVIMYILLCG 229
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 417 YLHEQCDPKIIHRDVKAANIL-LDE--DFEAV-VGDFGLAKLLDHRDSHVTTAVRGTVGH 472
YLH Q ++HRD+K +NIL +DE + E++ + DFG AK L + + T T
Sbjct: 131 YLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANF 186
Query: 473 IAPEYLSTGQSSEKTDVFGFGILLLELITG 502
+APE L D++ G+LL +TG
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433
L+V + G + SR++D G A I + YLH I HRDVK
Sbjct: 89 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP 143
Query: 434 ANILLDEDFEAVV---GDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 490
N+L + DFG AK +S T T ++APE L + + D++
Sbjct: 144 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMW 201
Query: 491 GFGILLLELITG 502
G+++ L+ G
Sbjct: 202 SLGVIMYILLCG 213
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 122/289 (42%), Gaps = 45/289 (15%)
Query: 303 FSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ----FQTEVETIS-LAVH 357
+S +G GG V++ + A+K + N+ + Q ++ E+ ++ L H
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYV---NLEEADNQTLDSYRNEIAYLNKLQQH 114
Query: 358 RN-LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
+ ++RL + T+ +Y M G++ L + + ++D RK +
Sbjct: 115 SDKIIRLYDYEITDQ---YIYMVMECGNI--DLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVR-GTVGHIAP 475
+H+ I+H D+K AN L+ + ++ DFG+A + + V + GTV ++ P
Sbjct: 170 TIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPP 225
Query: 476 EYLSTGQSSEKT-----------DVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E + SS + DV+ G +L + G+ F + NQ + K
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQ-------ISK 276
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVL 573
LH ++D + + F I +++ V C + +P R + E+L
Sbjct: 277 LH------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433
L+V + G + SR++D G A I + YLH I HRDVK
Sbjct: 90 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP 144
Query: 434 ANILLDEDFEAVV---GDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 490
N+L + DFG AK +S T T ++APE L + + D++
Sbjct: 145 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMW 202
Query: 491 GFGILLLELITG 502
G+++ L+ G
Sbjct: 203 SLGVIMYILLCG 214
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433
L+V + G + SR++D G A I + YLH I HRDVK
Sbjct: 91 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP 145
Query: 434 ANILLDEDFEAVV---GDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 490
N+L + DFG AK +S T T ++APE L + + D++
Sbjct: 146 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMW 203
Query: 491 GFGILLLELITG 502
G+++ L+ G
Sbjct: 204 SLGVIMYILLCG 215
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 123/289 (42%), Gaps = 45/289 (15%)
Query: 303 FSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ----FQTEVETIS-LAVH 357
+S +G GG V++ + A+K + N+ + Q ++ E+ ++ L H
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYV---NLEEADNQTLDSYRNEIAYLNKLQQH 66
Query: 358 RN-LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
+ ++RL + T+ +Y M G++ L + + ++D RK +
Sbjct: 67 SDKIIRLYDYEITDQ---YIYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNMLEAVH 121
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA-KLLDHRDSHVTTAVRGTVGHIAP 475
+H+ I+H D+K AN L+ + ++ DFG+A ++ S V + GTV ++ P
Sbjct: 122 TIHQH---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPP 177
Query: 476 EYLSTGQSSEKT-----------DVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E + SS + DV+ G +L + G+ F + NQ + K
Sbjct: 178 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQ-------ISK 228
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVL 573
LH ++D + + F I +++ V C + +P R + E+L
Sbjct: 229 LH------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG-- 177
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
S + T T + APE + E D++ G ++ E+I G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433
L+V + G + SR++D G A I + YLH I HRDVK
Sbjct: 141 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP 195
Query: 434 ANILLDEDFEAVV---GDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 490
N+L + DFG AK +S T T ++APE L + + D++
Sbjct: 196 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMW 253
Query: 491 GFGILLLELITG 502
G+++ L+ G
Sbjct: 254 SLGVIMYILLCG 265
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 122/289 (42%), Gaps = 45/289 (15%)
Query: 303 FSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ----FQTEVETIS-LAVH 357
+S +G GG V++ + A+K + N+ + Q ++ E+ ++ L H
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYV---NLEEADNQTLDSYRNEIAYLNKLQQH 67
Query: 358 RN-LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
+ ++RL + T+ +Y M G++ L + + ++D RK +
Sbjct: 68 SDKIIRLYDYEITDQ---YIYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNMLEAVH 122
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVR-GTVGHIAP 475
+H+ I+H D+K AN L+ + ++ DFG+A + + V + GTV ++ P
Sbjct: 123 TIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPP 178
Query: 476 EYLSTGQSSEKT-----------DVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E + SS + DV+ G +L + G+ F + NQ + K
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQ-------ISK 229
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVL 573
LH ++D + + F I +++ V C + +P R + E+L
Sbjct: 230 LH------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433
L+V + G + SR++D G A I + YLH I HRDVK
Sbjct: 135 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP 189
Query: 434 ANILLDEDFEAVV---GDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 490
N+L + DFG AK +S T T ++APE L + + D++
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMW 247
Query: 491 GFGILLLELITG 502
G+++ L+ G
Sbjct: 248 SLGVIMYILLCG 259
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 177
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
S + T T + APE + E D++ G ++ E+I G
Sbjct: 178 TSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 177
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
S + T T + APE + E D++ G ++ E+I G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG-- 177
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
S + T T + APE + E D++ G ++ E+I G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433
L+V + G + SR++D G A I + YLH I HRDVK
Sbjct: 91 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP 145
Query: 434 ANILLDEDFEAVV---GDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 490
N+L + DFG AK +S T T ++APE L + + D++
Sbjct: 146 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMW 203
Query: 491 GFGILLLELITG 502
G+++ L+ G
Sbjct: 204 SLGVIMYILLCG 215
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 309 LGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368
LGRG FGIV++ + + + +V + E+ +++A HRN+L L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFE 71
Query: 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP---- 424
+ E ++++ ++ + R+ A + R+ ++ Y+H+ C+
Sbjct: 72 SMEELVMIFEFISGLDIFERI-----NTSAFELNEREIVS--------YVHQVCEALQFL 118
Query: 425 ---KIIHRDVKAANILLDEDFEAVVG--DFGLAKLLDHRDSH--VTTAVRGTVGHIAPEY 477
I H D++ NI+ + + +FG A+ L D+ + TA + APE
Sbjct: 119 HSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE----YYAPEV 174
Query: 478 LSTGQSSEKTDVFGFGILLLELITG 502
S TD++ G L+ L++G
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
L +LH Q ++H DVK ANI L +GDFGL L++ + G ++A
Sbjct: 170 LAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMA 224
Query: 475 PEYLSTGQSSEKTDVFGFGILLLEL 499
PE L G DVF G+ +LE+
Sbjct: 225 PELLQ-GSYGTAADVFSLGLTILEV 248
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG-- 177
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
S + T T + APE + E D++ G ++ E+I G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 12/198 (6%)
Query: 309 LGRGGFGIVYKGCFSD--GALVAVKRL-KDYNIAGGEVQFQTEVETISLAVHRNLLRLCG 365
+G G GIV F G VAVK+L + + + E+ + H+N++ L
Sbjct: 30 IGSGAQGIVC-AAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLN 88
Query: 366 -FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
F + Y+ + + L IH LD R + G+ +LH
Sbjct: 89 VFTPQKTLEEFQDVYLVMELMDANLCQVIHME--LDHERMSYLLYQMLCGIKHLH---SA 143
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
IIHRD+K +NI++ D + DFGLA+ + + T T + APE +
Sbjct: 144 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAS--TNFMMTPYVVTRYYRAPEVILGMGYK 201
Query: 485 EKTDVFGFGILLLELITG 502
E D++ G ++ EL+ G
Sbjct: 202 ENVDIWSVGCIMGELVKG 219
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 122/289 (42%), Gaps = 45/289 (15%)
Query: 303 FSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ----FQTEVETIS-LAVH 357
+S +G GG V++ + A+K + N+ + Q ++ E+ ++ L H
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYV---NLEEADNQTLDSYRNEIAYLNKLQQH 114
Query: 358 RN-LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
+ ++RL + T+ +Y M G++ L + + ++D RK +
Sbjct: 115 SDKIIRLYDYEITDQ---YIYMVMECGNI--DLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVR-GTVGHIAP 475
+H+ I+H D+K AN L+ + ++ DFG+A + + V + GTV ++ P
Sbjct: 170 TIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPP 225
Query: 476 EYLSTGQSSEKT-----------DVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E + SS + DV+ G +L + G+ F + NQ + K
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQ-------ISK 276
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVL 573
LH ++D + + F I +++ V C + +P R + E+L
Sbjct: 277 LH------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 125 LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 181
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
V V T + APE + E D++ G ++ E+I G
Sbjct: 182 FMMVPFVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 116 LDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG-- 170
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG-- 177
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG-- 177
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 28/222 (12%)
Query: 296 LRAATSNFSAK-------NILGRGGFGIVYKG-CFSDGALVAVKRLKDYNIAGGEVQFQT 347
+ A NF K LGRG +G+V K G + AVKR++ + + +
Sbjct: 22 FQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLX 81
Query: 348 EVETISLAVHRNLLRLCGFCSTENERLL------VYPYMPNGSVASRLRDHIHGRPALDW 401
+++ V C F T L + + + S+ + I +
Sbjct: 82 DLDISXRTVD------CPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPE 135
Query: 402 ARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH 461
+IA+ + L +LH + +IHRDVK +N+L++ + DFG++ L D
Sbjct: 136 DILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYL--VDDV 191
Query: 462 VTTAVRGTVGHIAPEY----LSTGQSSEKTDVFGFGILLLEL 499
G + APE L+ S K+D++ GI +EL
Sbjct: 192 AKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 10/132 (7%)
Query: 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433
L+V + G + SR++D G A I + YLH I HRDVK
Sbjct: 89 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP 143
Query: 434 ANILLDEDFEAVV---GDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 490
N+L + DFG AK +S T T ++APE L + + D++
Sbjct: 144 ENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTEPCYTPYYVAPEVLGPEKYDKSCDMW 201
Query: 491 GFGILLLELITG 502
G+++ L+ G
Sbjct: 202 SLGVIMYILLCG 213
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 298 AATSNFS-AKNILGRGGFGIVYKGCFS--DGALVAVKRLKDYNIAGGEVQFQTEVE---- 350
A T ++ +K +LG G G V + CF G A+K L D A EV +
Sbjct: 25 AVTDDYQLSKQVLGLGVNGKVLE-CFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPH 83
Query: 351 -TISLAVHRNLL--RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRI 407
L V+ N+ + C L++ M G + SR+++ G A I
Sbjct: 84 IVCILDVYENMHHGKRC--------LLIIMECMEGGELFSRIQER--GDQAFTEREAAEI 133
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTT 464
+ +LH I HRDVK N+L ++D + DFG AK + + + T
Sbjct: 134 MRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQT 188
Query: 465 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
T ++APE L + + D++ G+++ L+ G
Sbjct: 189 PCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 298 AATSNFS-AKNILGRGGFGIVYKGCFS--DGALVAVKRLKDYNIAGGEVQFQTEVE---- 350
A T ++ +K +LG G G V + CF G A+K L D A EV +
Sbjct: 6 AVTDDYQLSKQVLGLGVNGKVLE-CFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPH 64
Query: 351 -TISLAVHRNLL--RLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRI 407
L V+ N+ + C L++ M G + SR+++ G A I
Sbjct: 65 IVCILDVYENMHHGKRC--------LLIIMECMEGGELFSRIQER--GDQAFTEREAAEI 114
Query: 408 ALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTT 464
+ +LH I HRDVK N+L ++D + DFG AK + + + T
Sbjct: 115 MRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQT 169
Query: 465 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 502
T ++APE L + + D++ G+++ L+ G
Sbjct: 170 PCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 215
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 10/132 (7%)
Query: 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433
L+V + G + SR++D G A I + YLH I HRDVK
Sbjct: 135 LIVXECLDGGELFSRIQDR--GDQAFTEREASEIXKSIGEAIQYLH---SINIAHRDVKP 189
Query: 434 ANILLDEDFEAVV---GDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 490
N+L + DFG AK +S T T ++APE L + + D +
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDXW 247
Query: 491 GFGILLLELITG 502
G++ L+ G
Sbjct: 248 SLGVIXYILLCG 259
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 215
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 27/211 (12%)
Query: 307 NILGRGGFGIVYKGCFSDG----ALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
++LG G +G V + S+ A+ +K+ K I GE + E++ + H+N+++
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARG-------- 414
L E ++ + YM +++ LD KR + A G
Sbjct: 71 LVDVLYNEEKQKM---YMVMEYCVCGMQE------MLDSVPEKRFPVCQAHGYFCQLIDG 121
Query: 415 LLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIA 474
L YLH Q I+H+D+K N+LL + G+A+ L + T
Sbjct: 122 LEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQ 178
Query: 475 PEYLSTGQ---SSEKTDVFGFGILLLELITG 502
P ++ G S K D++ G+ L + TG
Sbjct: 179 PPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 116 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 170
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 357 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
HRN+L L F E+ LV+ M GS+ S HIH R + + A L
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILS----HIHKRRHFNELEASVVVQDVASALD 125
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAV---VGDFGLAK--LLDHRDSHVTT----AVR 467
+LH + I HRD+K NIL + + + DFGL L+ S ++T
Sbjct: 126 FLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC 182
Query: 468 GTVGHIAPEYLSTGQSS-----EKTDVFGFGILLLELITG 502
G+ ++APE + ++ D++ G++L L++G
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 178
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 171
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 177
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 171
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 122 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 176
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 177 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 177
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 178
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG-- 177
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG-- 177
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 121/289 (41%), Gaps = 45/289 (15%)
Query: 303 FSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQ----FQTEVETIS-LAVH 357
+S +G GG V++ + A+K + N+ + Q ++ E+ ++ L H
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYV---NLEEADNQTLDSYRNEIAYLNKLQQH 114
Query: 358 RN-LLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL 416
+ ++RL + T+ +Y M G++ L + + ++D RK +
Sbjct: 115 SDKIIRLYDYEITDQ---YIYMVMECGNI--DLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 417 YLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVR-GTVGHIAP 475
+H+ I+H D+K AN L+ + ++ DFG+A + + V + G V ++ P
Sbjct: 170 TIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPP 225
Query: 476 EYLSTGQSSEKT-----------DVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524
E + SS + DV+ G +L + G+ F + NQ + K
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQ-------ISK 276
Query: 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVL 573
LH ++D + + F I +++ V C + +P R + E+L
Sbjct: 277 LH------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 12/198 (6%)
Query: 309 LGRGGFGIVYKGCFSD--GALVAVKRL-KDYNIAGGEVQFQTEVETISLAVHRNLLRLCG 365
+G G GIV F G VAVK+L + + + E+ + H+N++ L
Sbjct: 32 IGSGAQGIVC-AAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLN 90
Query: 366 -FCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDP 424
F + Y+ + + L IH LD R + G+ +LH
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLCQVIHME--LDHERMSYLLYQMLCGIKHLH---SA 145
Query: 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSS 484
IIHRD+K +NI++ D + DFGLA+ + + T T + APE + +
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--CTNFMMTPYVVTRYYRAPEVILGMGYA 203
Query: 485 EKTDVFGFGILLLELITG 502
D++ G ++ EL+ G
Sbjct: 204 ANVDIWSVGCIMGELVKG 221
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 80/204 (39%), Gaps = 19/204 (9%)
Query: 309 LGRGGFGIVYK------GCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR 362
LG G F +V K G + +R K + EV + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC 422
L + + +L+ + G L D + + +L G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGE----LFDFLAEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 423 DPKIIHRDVKAANI-LLDEDF---EAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL 478
+I H D+K NI LLD + + DFGLA +D + + GT +APE +
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPAFVAPEIV 189
Query: 479 STGQSSEKTDVFGFGILLLELITG 502
+ + D++ G++ L++G
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 18/207 (8%)
Query: 307 NILGRGGFGIVYKGCFS--DGALVAVK--RLKDYNIAGG--EVQFQTEVETISLAVHRNL 360
++G+G F +V + C + G AVK + + + G + E + H ++
Sbjct: 30 EVIGKGPFSVVRR-CINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 361 LRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
+ L S++ +V+ +M + I R + + +A R +L
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFE----IVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 421 QC-DPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTTAVR-GTVGHIAP 475
C D IIHRDVK +LL + +G FG+A L +S + R GT +AP
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGGRVGTPHFMAP 202
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITG 502
E + + DV+G G++L L++G
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 128 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 182
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 183 TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 115/284 (40%), Gaps = 45/284 (15%)
Query: 309 LGRGGFGIVYKGCFSD----GAL----VAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL 360
LG+G F ++KG + G L V +K L + E F+ +S H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHL 74
Query: 361 LRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
+ G C +E +LV ++ GS+ + L+ + + ++ + +A A + +L E
Sbjct: 75 VLNYGVCVCGDENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEE 131
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA---VRGTVGHIAPEY 477
+IH +V A NILL + + G+ KL D S ++ + + PE
Sbjct: 132 N---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPEC 188
Query: 478 LSTGQS-SEKTDVFGFGILLLELITGQ----RALDFGRAANQRGVMLDWVKKLHQEGKLS 532
+ ++ + TD + FG L E+ +G ALD R L + + HQ
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK-------LQFYEDRHQ----- 236
Query: 533 QMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+ E+ + C + P HRP +++ L
Sbjct: 237 ----------LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 399 LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458
LD R + G+ +LH IIHRD+K +NI++ D + DFGLA+
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 171
Query: 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 500
S + T T + APE + E D++ G ++ E++
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 117/287 (40%), Gaps = 25/287 (8%)
Query: 309 LGRGGFGI--VYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGF 366
+G G FG+ + + + LVAVK ++ A + Q E+ H N++R
Sbjct: 28 IGSGNFGVARLMRDKLT-KELVAVKYIE--RGAAIDENVQREIINHRSLRHPNIVRFKEV 84
Query: 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426
T ++ Y G + R+ + GR + D AR L + G+ Y H +I
Sbjct: 85 ILTPTHLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLS--GVSYCHSM---QI 137
Query: 427 IHRDVKAANILLD--EDFEAVVGDFGLAK-LLDHRDSHVTTAVRGTVGHIAPEYLSTGQS 483
HRD+K N LLD + DFG +K + H T GT +IAPE L +
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEVLLRQEY 194
Query: 484 SEK-TDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGN 542
K DV+ G+ L ++ G A F R D+ K + + + + D++ +
Sbjct: 195 DGKIADVWSCGVTLYVMLVG--AYPFEDPEEPR----DYRKTIQRILSVKYSIPDDIRIS 248
Query: 543 FDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLAEKWEASQ 589
+ L + VA T+ + S LK L D + E SQ
Sbjct: 249 PECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQ 295
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 18/207 (8%)
Query: 307 NILGRGGFGIVYKGCFS--DGALVAVK--RLKDYNIAGG--EVQFQTEVETISLAVHRNL 360
++G+G F +V + C + G AVK + + + G + E + H ++
Sbjct: 32 EVIGKGPFSVVRR-CINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 90
Query: 361 LRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
+ L S++ +V+ +M + I R + + +A R +L
Sbjct: 91 VELLETYSSDGMLYMVFEFMDGADLCFE----IVKRADAGFVYSEAVASHYMRQILEALR 146
Query: 421 QC-DPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLDHRDSHVTTAVR-GTVGHIAP 475
C D IIHRDVK +LL + +G FG+A L +S + R GT +AP
Sbjct: 147 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGGRVGTPHFMAP 204
Query: 476 EYLSTGQSSEKTDVFGFGILLLELITG 502
E + + DV+G G++L L++G
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 115/284 (40%), Gaps = 45/284 (15%)
Query: 309 LGRGGFGIVYKGCFSD----GAL----VAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL 360
LG+G F ++KG + G L V +K L + E F+ +S H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHL 74
Query: 361 LRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE 420
+ G C +E +LV ++ GS+ + L+ + + ++ + +A A + +L E
Sbjct: 75 VLNYGVCFCGDENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAWAMHFLEE 131
Query: 421 QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA---VRGTVGHIAPEY 477
+IH +V A NILL + + G+ KL D S ++ + + PE
Sbjct: 132 N---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPEC 188
Query: 478 LSTGQS-SEKTDVFGFGILLLELITGQ----RALDFGRAANQRGVMLDWVKKLHQEGKLS 532
+ ++ + TD + FG L E+ +G ALD R L + + HQ
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK-------LQFYEDRHQ----- 236
Query: 533 QMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576
+ E+ + C + P HRP +++ L
Sbjct: 237 ----------LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,369,997
Number of Sequences: 62578
Number of extensions: 754969
Number of successful extensions: 4373
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 236
Number of HSP's that attempted gapping in prelim test: 1948
Number of HSP's gapped (non-prelim): 1219
length of query: 623
length of database: 14,973,337
effective HSP length: 105
effective length of query: 518
effective length of database: 8,402,647
effective search space: 4352571146
effective search space used: 4352571146
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)