Query 006968
Match_columns 623
No_of_seqs 640 out of 5458
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 13:43:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006968.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006968hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 4.1E-55 1.4E-59 444.9 16.4 257 302-578 27-303 (308)
2 4asz_A BDNF/NT-3 growth factor 100.0 8.4E-55 2.9E-59 440.7 14.1 257 301-578 13-286 (299)
3 4aoj_A High affinity nerve gro 100.0 3.8E-54 1.3E-58 442.0 17.8 257 301-578 41-316 (329)
4 3omv_A RAF proto-oncogene seri 100.0 1.4E-53 4.7E-58 431.9 19.2 257 301-578 36-297 (307)
5 4fih_A Serine/threonine-protei 100.0 1.6E-51 5.6E-56 421.9 22.7 250 301-575 74-324 (346)
6 4ase_A Vascular endothelial gr 100.0 9.9E-53 3.4E-57 434.9 13.5 267 293-578 56-344 (353)
7 3hmm_A TGF-beta receptor type- 100.0 1.4E-51 4.6E-56 419.8 19.4 266 301-578 3-294 (303)
8 4b9d_A Serine/threonine-protei 100.0 1.9E-52 6.5E-57 429.5 13.1 252 301-575 24-277 (350)
9 4g3f_A NF-kappa-beta-inducing 100.0 2.4E-51 8.3E-56 419.4 20.1 250 301-578 58-313 (336)
10 3fpq_A Serine/threonine-protei 100.0 6.3E-51 2.2E-55 409.4 22.3 246 304-575 29-283 (290)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 6.7E-52 2.3E-56 418.5 14.1 249 301-574 32-284 (311)
12 4fie_A Serine/threonine-protei 100.0 2.7E-50 9.3E-55 422.9 24.0 250 301-575 151-401 (423)
13 3uim_A Brassinosteroid insensi 100.0 1.8E-50 6.3E-55 417.4 22.2 319 275-593 4-323 (326)
14 3hyh_A Carbon catabolite-derep 100.0 1.4E-50 4.9E-55 403.3 17.0 247 301-575 13-263 (275)
15 3ubd_A Ribosomal protein S6 ki 100.0 5.9E-51 2E-55 411.6 10.3 249 301-575 24-282 (304)
16 4g31_A Eukaryotic translation 100.0 4.5E-49 1.5E-53 399.4 17.6 252 301-575 5-280 (299)
17 4b99_A Mitogen-activated prote 100.0 4.2E-46 1.4E-50 391.9 21.8 262 301-576 54-346 (398)
18 2qkw_B Protein kinase; three-h 100.0 7.9E-46 2.7E-50 381.9 23.0 282 292-578 30-312 (321)
19 4f9c_A Cell division cycle 7-r 100.0 6.8E-46 2.3E-50 386.2 19.8 198 299-509 19-250 (361)
20 3v5w_A G-protein coupled recep 100.0 3.7E-45 1.3E-49 400.7 16.4 252 301-577 189-452 (689)
21 3uto_A Twitchin; kinase, muscl 100.0 1.9E-44 6.7E-49 397.5 22.2 252 301-575 157-411 (573)
22 2nru_A Interleukin-1 receptor- 100.0 1.6E-42 5.5E-47 354.7 28.2 283 287-579 11-304 (307)
23 2psq_A Fibroblast growth facto 100.0 1.4E-43 4.7E-48 372.3 18.8 258 301-578 81-361 (370)
24 3fxz_A Serine/threonine-protei 100.0 1.3E-42 4.3E-47 353.9 24.8 251 300-575 19-270 (297)
25 3zgw_A Maternal embryonic leuc 100.0 7.8E-44 2.7E-48 369.8 15.6 252 300-576 9-262 (347)
26 3s95_A LIMK-1, LIM domain kina 100.0 3E-43 1E-47 360.7 18.7 254 301-578 10-279 (310)
27 3kul_A Ephrin type-A receptor 100.0 1.7E-43 5.8E-48 365.0 16.6 255 301-578 49-310 (325)
28 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.3E-43 1.1E-47 352.5 17.9 256 300-580 7-263 (268)
29 4hcu_A Tyrosine-protein kinase 100.0 2E-43 6.8E-48 354.4 15.2 253 301-578 10-263 (269)
30 2c30_A Serine/threonine-protei 100.0 4.8E-42 1.6E-46 353.6 25.9 263 289-576 23-296 (321)
31 3cbl_A C-FES, proto-oncogene t 100.0 9.2E-44 3.2E-48 374.7 12.9 256 300-578 113-371 (377)
32 4euu_A Serine/threonine-protei 100.0 5E-42 1.7E-46 353.1 25.2 271 301-580 9-308 (319)
33 3p86_A Serine/threonine-protei 100.0 5.7E-43 1.9E-47 358.4 17.8 258 299-578 35-295 (309)
34 2qol_A Ephrin receptor; recept 100.0 2.3E-43 7.7E-48 370.9 14.9 256 301-579 45-307 (373)
35 3fe3_A MAP/microtubule affinit 100.0 6.5E-43 2.2E-47 360.7 16.1 250 300-576 14-266 (328)
36 3vhe_A Vascular endothelial gr 100.0 2.6E-43 8.8E-48 368.8 13.0 269 291-578 12-352 (359)
37 3l9p_A Anaplastic lymphoma kin 100.0 2E-43 6.9E-48 370.7 11.9 258 301-578 71-342 (367)
38 3soc_A Activin receptor type-2 100.0 4E-43 1.4E-47 361.8 13.9 267 300-578 23-315 (322)
39 3gen_A Tyrosine-protein kinase 100.0 7.3E-43 2.5E-47 352.9 15.1 254 300-578 23-277 (283)
40 3tt0_A Basic fibroblast growth 100.0 1.6E-42 5.4E-47 366.0 17.5 260 300-579 68-350 (382)
41 2ivs_A Proto-oncogene tyrosine 100.0 1.6E-42 5.3E-47 355.8 16.4 259 300-578 22-308 (314)
42 3poz_A Epidermal growth factor 100.0 1.3E-42 4.5E-47 358.8 15.9 255 301-579 15-276 (327)
43 1luf_A Muscle-specific tyrosin 100.0 1E-42 3.5E-47 361.8 15.1 261 299-579 45-333 (343)
44 3tki_A Serine/threonine-protei 100.0 1.4E-42 4.8E-47 357.8 15.8 255 301-577 7-264 (323)
45 1mp8_A Focal adhesion kinase 1 100.0 1.3E-42 4.5E-47 350.8 15.1 256 300-579 14-274 (281)
46 4eqm_A Protein kinase; transfe 100.0 9.5E-42 3.2E-46 346.9 21.5 259 301-579 11-273 (294)
47 1opk_A P150, C-ABL, proto-onco 100.0 1.7E-42 5.7E-47 377.8 16.9 257 300-580 219-477 (495)
48 2yab_A Death-associated protei 100.0 1.9E-41 6.4E-46 354.0 24.1 255 300-577 11-275 (361)
49 1qcf_A Haematopoetic cell kina 100.0 9.2E-43 3.1E-47 376.1 14.5 255 300-579 187-442 (454)
50 3q4u_A Activin receptor type-1 100.0 5.9E-42 2E-46 349.3 19.6 260 300-578 7-299 (301)
51 1o6l_A RAC-beta serine/threoni 100.0 7.5E-42 2.6E-46 353.8 20.4 251 301-577 5-263 (337)
52 3v8s_A RHO-associated protein 100.0 7.7E-42 2.6E-46 362.3 20.8 266 294-581 62-336 (410)
53 4aw2_A Serine/threonine-protei 100.0 3.5E-42 1.2E-46 367.7 17.9 266 293-577 66-341 (437)
54 3kex_A Receptor tyrosine-prote 100.0 1.6E-42 5.6E-47 357.8 14.8 257 301-581 13-276 (325)
55 2pmi_A Negative RE, cyclin-dep 100.0 4.2E-42 1.4E-46 353.4 17.7 267 300-575 4-294 (317)
56 1ob3_A PFPK5, cell division co 100.0 3.2E-42 1.1E-46 349.3 16.4 264 301-575 2-281 (288)
57 3niz_A Rhodanese family protei 100.0 2.7E-42 9.4E-47 353.8 16.1 265 300-576 20-302 (311)
58 1rjb_A FL cytokine receptor; k 100.0 3.5E-42 1.2E-46 358.1 16.5 262 299-579 43-332 (344)
59 3c0i_A Peripheral plasma membr 100.0 1.4E-41 4.8E-46 354.5 20.9 256 301-575 24-287 (351)
60 1t46_A HOMO sapiens V-KIT hard 100.0 3.6E-42 1.2E-46 352.9 15.9 260 300-578 22-304 (313)
61 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.2E-42 1.1E-46 371.6 15.8 255 300-579 183-438 (452)
62 1tki_A Titin; serine kinase, m 100.0 2.7E-41 9.2E-46 347.8 21.8 254 300-577 4-260 (321)
63 3t9t_A Tyrosine-protein kinase 100.0 3.3E-42 1.1E-46 344.8 14.5 253 301-578 8-261 (267)
64 3qd2_B Eukaryotic translation 100.0 5E-42 1.7E-46 354.6 16.3 253 300-575 5-326 (332)
65 3ugc_A Tyrosine-protein kinase 100.0 4.2E-42 1.4E-46 349.6 15.3 262 301-578 10-288 (295)
66 1k9a_A Carboxyl-terminal SRC k 100.0 1.2E-41 4.2E-46 366.8 19.6 249 300-578 192-442 (450)
67 3lb7_A RAF proto-oncogene seri 100.0 4.8E-41 1.6E-45 343.8 22.9 258 300-578 35-297 (307)
68 2y0a_A Death-associated protei 100.0 5E-41 1.7E-45 346.7 23.3 254 301-577 11-274 (326)
69 2zv2_A Calcium/calmodulin-depe 100.0 4E-41 1.4E-45 342.9 22.1 250 301-575 13-293 (298)
70 3cc6_A Protein tyrosine kinase 100.0 6.7E-42 2.3E-46 345.5 15.7 255 300-578 11-270 (281)
71 2izr_A Casein kinase I isoform 100.0 2.1E-41 7.3E-46 350.2 19.4 258 301-579 9-279 (330)
72 3dtc_A Mitogen-activated prote 100.0 7.7E-42 2.6E-46 343.0 15.6 253 301-578 7-270 (271)
73 4dc2_A Protein kinase C IOTA t 100.0 7.8E-41 2.7E-45 352.7 23.8 259 300-576 51-320 (396)
74 2pvf_A Fibroblast growth facto 100.0 1.1E-41 3.7E-46 353.0 16.8 259 300-578 34-315 (334)
75 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.2E-41 4E-46 352.0 17.0 249 301-577 9-261 (336)
76 3is5_A Calcium-dependent prote 100.0 5.1E-41 1.7E-45 339.9 21.1 254 301-575 22-279 (285)
77 4f0f_A Serine/threonine-protei 100.0 2.7E-41 9.3E-46 342.1 19.1 252 301-578 19-286 (287)
78 3kfa_A Tyrosine-protein kinase 100.0 9.5E-42 3.2E-46 345.5 15.4 257 299-579 11-269 (288)
79 3o0g_A Cell division protein k 100.0 2.1E-41 7.1E-46 343.9 17.9 266 301-576 2-284 (292)
80 3soa_A Calcium/calmodulin-depe 100.0 1E-40 3.4E-45 357.7 23.7 254 300-575 10-268 (444)
81 4e5w_A Tyrosine-protein kinase 100.0 4E-42 1.4E-46 350.8 12.2 262 301-578 21-299 (302)
82 2bdw_A Hypothetical protein K1 100.0 7.7E-41 2.6E-45 350.1 22.2 253 300-575 28-285 (362)
83 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.7E-41 5.7E-46 353.5 17.0 251 300-576 22-282 (353)
84 3p1a_A MYT1 kinase, membrane-a 100.0 1.4E-41 4.9E-46 348.5 16.2 246 301-575 57-305 (311)
85 1csn_A Casein kinase-1; phosph 100.0 4.9E-41 1.7E-45 341.9 20.0 259 301-579 10-281 (298)
86 1fot_A TPK1 delta, CAMP-depend 100.0 2.1E-41 7.3E-46 347.8 17.5 248 301-577 6-261 (318)
87 2vd5_A DMPK protein; serine/th 100.0 4E-42 1.4E-46 364.8 12.4 265 292-576 52-329 (412)
88 2i1m_A Macrophage colony-stimu 100.0 3.5E-42 1.2E-46 356.4 11.7 261 299-578 44-323 (333)
89 3lxp_A Non-receptor tyrosine-p 100.0 7E-42 2.4E-46 351.9 13.7 266 303-578 33-307 (318)
90 3ork_A Serine/threonine protei 100.0 1.9E-41 6.5E-46 347.5 16.8 254 301-575 12-274 (311)
91 1u59_A Tyrosine-protein kinase 100.0 1.7E-41 5.8E-46 343.7 16.1 254 301-578 9-269 (287)
92 3qup_A Tyrosine-protein kinase 100.0 1.8E-41 6.2E-46 349.5 16.5 260 299-578 21-295 (323)
93 1mqb_A Ephrin type-A receptor 100.0 1.6E-41 5.5E-46 351.5 16.1 256 301-579 44-307 (333)
94 3kmu_A ILK, integrin-linked ki 100.0 1.6E-41 5.6E-46 340.3 15.6 250 301-578 10-267 (271)
95 1p4o_A Insulin-like growth fac 100.0 7.9E-42 2.7E-46 352.0 13.6 267 295-581 19-299 (322)
96 1qpc_A LCK kinase; alpha beta 100.0 1.6E-41 5.4E-46 342.3 15.4 254 300-578 12-266 (279)
97 2xir_A Vascular endothelial gr 100.0 8.9E-42 3.1E-46 350.4 13.6 268 292-578 18-307 (316)
98 3a8x_A Protein kinase C IOTA t 100.0 6.9E-41 2.4E-45 348.0 20.3 257 301-575 9-276 (345)
99 3lzb_A Epidermal growth factor 100.0 2.8E-41 9.5E-46 348.8 17.2 255 301-579 15-276 (327)
100 3op5_A Serine/threonine-protei 100.0 7.5E-42 2.6E-46 358.5 13.0 266 300-579 34-327 (364)
101 4fr4_A YANK1, serine/threonine 100.0 1.2E-40 4E-45 350.1 21.6 251 301-575 15-272 (384)
102 3hko_A Calcium/calmodulin-depe 100.0 7.3E-41 2.5E-45 348.2 19.6 263 297-576 22-332 (345)
103 1kob_A Twitchin; kinase, intra 100.0 1.9E-40 6.6E-45 349.6 22.9 254 300-576 50-306 (387)
104 3kn6_A Ribosomal protein S6 ki 100.0 6E-41 2E-45 345.9 18.6 251 306-575 16-271 (325)
105 4eut_A Serine/threonine-protei 100.0 6.2E-41 2.1E-45 355.5 19.0 270 301-579 9-307 (396)
106 1xjd_A Protein kinase C, theta 100.0 1.7E-41 5.9E-46 352.1 14.4 252 298-575 14-270 (345)
107 2ozo_A Tyrosine-protein kinase 100.0 2.9E-41 1E-45 376.7 17.1 252 303-578 337-595 (613)
108 3c1x_A Hepatocyte growth facto 100.0 2.1E-41 7E-46 355.7 14.9 254 302-578 90-352 (373)
109 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.6E-41 1.2E-45 350.7 16.4 248 301-577 41-296 (350)
110 2wqm_A Serine/threonine-protei 100.0 1.5E-40 5.2E-45 340.6 20.8 260 301-578 32-294 (310)
111 3pls_A Macrophage-stimulating 100.0 6.9E-41 2.4E-45 340.8 17.8 255 302-578 22-284 (298)
112 3dbq_A Dual specificity protei 100.0 2.5E-41 8.6E-46 351.6 14.8 253 301-577 9-276 (343)
113 2buj_A Serine/threonine-protei 100.0 4.4E-41 1.5E-45 345.6 16.4 262 300-580 28-305 (317)
114 3cok_A Serine/threonine-protei 100.0 6E-41 2E-45 337.9 17.0 250 301-575 11-263 (278)
115 2h8h_A Proto-oncogene tyrosine 100.0 1.2E-41 4E-46 374.5 12.8 255 300-579 266-521 (535)
116 2w4o_A Calcium/calmodulin-depe 100.0 1.6E-40 5.6E-45 346.1 20.8 252 300-576 52-307 (349)
117 2h34_A Serine/threonine-protei 100.0 3.3E-40 1.1E-44 338.0 22.6 259 300-580 33-295 (309)
118 3dls_A PAS domain-containing s 100.0 7.8E-41 2.7E-45 346.5 18.1 245 300-577 23-277 (335)
119 3a62_A Ribosomal protein S6 ki 100.0 1.2E-40 4E-45 344.1 19.3 253 300-578 16-280 (327)
120 3f66_A Hepatocyte growth facto 100.0 6.4E-41 2.2E-45 341.3 16.8 255 301-578 25-288 (298)
121 3mdy_A Bone morphogenetic prot 100.0 5.3E-40 1.8E-44 340.4 23.9 266 297-578 33-328 (337)
122 4hgt_A Casein kinase I isoform 100.0 2.2E-40 7.5E-45 336.7 20.5 261 299-579 7-278 (296)
123 2a2a_A Death-associated protei 100.0 4.8E-40 1.6E-44 338.7 23.3 255 300-577 11-275 (321)
124 1fvr_A Tyrosine-protein kinase 100.0 4E-41 1.4E-45 347.6 15.2 256 301-578 25-297 (327)
125 3lxl_A Tyrosine-protein kinase 100.0 1.2E-41 4.2E-46 351.5 11.2 263 301-579 23-301 (327)
126 3gni_B Strad alpha; kinase fol 100.0 1.4E-40 4.9E-45 352.0 19.5 268 300-575 24-334 (389)
127 2x4f_A Myosin light chain kina 100.0 2.2E-40 7.6E-45 348.0 20.8 247 306-575 94-343 (373)
128 2eva_A TAK1 kinase - TAB1 chim 100.0 5.5E-41 1.9E-45 343.4 15.8 252 301-578 8-260 (307)
129 4ejn_A RAC-alpha serine/threon 100.0 1.4E-40 4.7E-45 358.5 19.6 253 300-578 147-408 (446)
130 2w5a_A Serine/threonine-protei 100.0 1.2E-41 4.3E-46 343.0 10.7 258 300-578 5-271 (279)
131 3og7_A AKAP9-BRAF fusion prote 100.0 1.8E-40 6.3E-45 336.5 19.2 259 300-579 23-286 (289)
132 3gxj_A TGF-beta receptor type- 100.0 3.4E-42 1.2E-46 351.3 6.5 263 301-582 3-298 (303)
133 2yex_A Serine/threonine-protei 100.0 9.1E-41 3.1E-45 336.0 16.8 255 300-576 6-263 (276)
134 3uc3_A Serine/threonine-protei 100.0 5.2E-41 1.8E-45 351.4 15.4 254 300-576 19-276 (361)
135 2i0e_A Protein kinase C-beta I 100.0 1E-40 3.4E-45 347.5 17.5 252 299-576 18-278 (353)
136 3uzp_A CKI-delta, CKID, casein 100.0 3.7E-40 1.3E-44 335.1 21.3 260 300-579 8-278 (296)
137 1x8b_A WEE1HU, WEE1-like prote 100.0 6E-41 2.1E-45 339.2 14.9 249 300-576 10-281 (289)
138 1b6c_B TGF-B superfamily recep 100.0 5.9E-40 2E-44 340.8 22.7 269 291-579 32-334 (342)
139 1xbb_A Tyrosine-protein kinase 100.0 3.9E-41 1.3E-45 341.8 13.4 254 300-578 15-276 (291)
140 2zmd_A Dual specificity protei 100.0 6.9E-41 2.4E-45 354.1 15.8 253 301-577 56-323 (390)
141 3kk8_A Calcium/calmodulin depe 100.0 7.3E-40 2.5E-44 331.0 22.6 253 300-575 5-262 (284)
142 3mtl_A Cell division protein k 100.0 4E-41 1.4E-45 347.2 13.4 264 301-576 2-283 (324)
143 3fdn_A Serine/threonine-protei 100.0 1.1E-40 3.9E-45 336.1 16.4 249 300-576 8-259 (279)
144 1vzo_A Ribosomal protein S6 ki 100.0 7.5E-41 2.6E-45 349.5 15.6 258 301-579 54-326 (355)
145 2eue_A Carbon catabolite derep 100.0 3E-40 1E-44 332.3 19.3 247 301-575 13-263 (275)
146 2y94_A 5'-AMP-activated protei 100.0 1.2E-40 4.2E-45 359.4 17.6 248 301-575 16-267 (476)
147 3g33_A Cell division protein k 100.0 1.5E-40 5.1E-45 340.3 17.3 267 299-576 7-298 (308)
148 1u5q_A Serine/threonine protei 100.0 6.9E-41 2.4E-45 348.6 15.1 249 301-577 54-308 (348)
149 4agu_A Cyclin-dependent kinase 100.0 3.9E-40 1.3E-44 337.6 20.3 268 301-576 3-286 (311)
150 3a7i_A MST3 kinase, serine/thr 100.0 1.3E-40 4.5E-45 339.9 16.5 250 301-576 22-272 (303)
151 2yfx_A Tyrosine-protein kinase 100.0 7.7E-41 2.6E-45 345.5 14.9 259 300-578 29-301 (327)
152 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.3E-40 7.8E-45 361.4 19.3 257 301-575 185-449 (543)
153 2acx_A G protein-coupled recep 100.0 1.9E-40 6.5E-45 362.8 18.7 257 300-577 183-447 (576)
154 3llt_A Serine/threonine kinase 100.0 1.1E-40 3.7E-45 349.2 15.9 272 291-575 25-356 (360)
155 3g2f_A Bone morphogenetic prot 100.0 3.3E-40 1.1E-44 342.0 19.2 267 300-578 12-315 (336)
156 4fvq_A Tyrosine-protein kinase 100.0 2.4E-40 8.3E-45 335.4 17.7 253 301-583 8-277 (289)
157 3oz6_A Mitogen-activated prote 100.0 5.9E-41 2E-45 354.9 13.7 265 299-575 7-329 (388)
158 3brb_A Proto-oncogene tyrosine 100.0 1.7E-40 5.8E-45 340.7 16.5 260 299-578 32-305 (313)
159 3f3z_A Calcium/calmodulin-depe 100.0 1.1E-39 3.9E-44 328.4 22.3 247 300-575 8-262 (277)
160 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5.8E-40 2E-44 344.3 20.8 250 300-578 64-336 (365)
161 2v62_A Serine/threonine-protei 100.0 1.5E-40 5.2E-45 346.0 16.0 266 301-581 37-328 (345)
162 2r5t_A Serine/threonine-protei 100.0 9.5E-41 3.3E-45 350.1 14.5 250 301-576 38-291 (373)
163 1nxk_A MAP kinase-activated pr 100.0 6.1E-40 2.1E-44 347.9 20.7 253 301-576 61-323 (400)
164 3bhy_A Death-associated protei 100.0 1.1E-39 3.8E-44 329.4 21.5 252 301-575 5-266 (283)
165 2a19_B Interferon-induced, dou 100.0 1.7E-40 5.9E-45 335.4 15.0 246 300-579 10-272 (284)
166 4fl3_A Tyrosine-protein kinase 100.0 2E-40 7E-45 370.8 16.5 247 307-578 375-628 (635)
167 2qr7_A Ribosomal protein S6 ki 100.0 2.3E-40 8E-45 343.6 15.7 253 300-576 21-279 (342)
168 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.2E-40 4.2E-45 344.3 13.5 265 299-575 32-319 (329)
169 1byg_A CSK, protein (C-termina 100.0 1.5E-40 5.3E-45 335.0 13.9 249 300-578 20-270 (278)
170 2vwi_A Serine/threonine-protei 100.0 8.7E-41 3E-45 340.8 12.2 266 299-575 13-288 (303)
171 3fme_A Dual specificity mitoge 100.0 1.3E-40 4.3E-45 337.5 13.0 256 300-575 6-267 (290)
172 3eqc_A Dual specificity mitoge 100.0 3.9E-40 1.3E-44 344.9 17.1 267 301-576 33-326 (360)
173 2w1i_A JAK2; chromosomal rearr 100.0 4.6E-40 1.6E-44 339.5 17.2 262 301-578 41-319 (326)
174 3ttj_A Mitogen-activated prote 100.0 6.7E-40 2.3E-44 353.9 19.1 265 300-576 61-357 (464)
175 3eb0_A Putative uncharacterize 100.0 4.2E-40 1.5E-44 347.6 17.1 265 297-575 3-322 (383)
176 1ua2_A CAK, cell division prot 100.0 3.3E-40 1.1E-44 343.5 16.1 269 298-577 7-294 (346)
177 3i6u_A CDS1, serine/threonine- 100.0 1.6E-39 5.5E-44 346.9 21.6 256 299-577 133-402 (419)
178 2jii_A Serine/threonine-protei 100.0 2.3E-40 7.8E-45 345.6 14.5 260 301-579 42-334 (352)
179 2ac3_A MAP kinase-interacting 100.0 2.1E-39 7.1E-44 333.0 21.2 257 301-576 12-297 (316)
180 3lm5_A Serine/threonine-protei 100.0 2.3E-39 7.8E-44 334.5 21.4 259 297-576 24-289 (327)
181 1t4h_A Serine/threonine-protei 100.0 3.9E-39 1.3E-43 326.8 22.5 248 302-575 27-283 (290)
182 4aaa_A Cyclin-dependent kinase 100.0 7E-40 2.4E-44 339.0 17.3 267 301-575 25-307 (331)
183 3an0_A Dual specificity mitoge 100.0 2.7E-40 9.1E-45 343.4 14.0 256 300-575 50-311 (340)
184 3byv_A Rhoptry kinase; malaria 100.0 6.7E-41 2.3E-45 353.0 9.6 245 300-575 72-360 (377)
185 3ll6_A Cyclin G-associated kin 100.0 3.7E-40 1.3E-44 341.3 14.9 252 301-578 28-305 (337)
186 2vgo_A Serine/threonine-protei 100.0 5.9E-40 2E-44 331.8 16.0 247 301-575 14-263 (284)
187 2rku_A Serine/threonine-protei 100.0 2.1E-39 7.1E-44 329.5 19.7 249 301-575 15-266 (294)
188 3com_A Serine/threonine-protei 100.0 5E-39 1.7E-43 329.8 22.7 252 299-575 27-279 (314)
189 3pg1_A Mitogen-activated prote 100.0 6.5E-40 2.2E-44 343.5 16.3 273 292-577 13-319 (362)
190 2y7j_A Phosphorylase B kinase 100.0 7.2E-39 2.5E-43 335.8 24.2 257 296-575 89-360 (365)
191 2owb_A Serine/threonine-protei 100.0 2E-39 7E-44 336.0 19.4 249 301-575 41-292 (335)
192 2j7t_A Serine/threonine-protei 100.0 1.5E-39 5.1E-44 331.7 18.1 254 300-576 18-277 (302)
193 2clq_A Mitogen-activated prote 100.0 1.6E-39 5.3E-44 330.3 18.1 253 302-575 23-279 (295)
194 1u46_A ACK-1, activated CDC42 100.0 2.3E-40 7.8E-45 335.8 11.7 256 301-579 18-282 (291)
195 1cm8_A Phosphorylated MAP kina 100.0 1.8E-39 6.3E-44 340.5 18.9 260 301-576 25-309 (367)
196 3nsz_A CK II alpha, casein kin 100.0 3E-39 1E-43 333.9 19.9 260 301-576 36-321 (330)
197 2r3i_A Cell division protein k 100.0 1E-39 3.6E-44 332.4 16.1 265 301-575 3-284 (299)
198 2jam_A Calcium/calmodulin-depe 100.0 3.9E-39 1.3E-43 329.1 20.4 251 300-575 8-262 (304)
199 2h6d_A 5'-AMP-activated protei 100.0 8.6E-40 2.9E-44 329.0 15.2 248 301-575 11-262 (276)
200 3rp9_A Mitogen-activated prote 100.0 6.1E-39 2.1E-43 347.0 22.8 194 301-502 53-280 (458)
201 3sv0_A Casein kinase I-like; t 100.0 2.8E-39 9.7E-44 349.4 20.0 262 301-582 7-279 (483)
202 2j0j_A Focal adhesion kinase 1 100.0 5.9E-40 2E-44 368.4 15.2 256 300-579 389-649 (656)
203 3n9x_A Phosphotransferase; mal 100.0 6.5E-39 2.2E-43 343.8 22.4 200 300-507 25-253 (432)
204 2pml_X PFPK7, Ser/Thr protein 100.0 2.6E-39 9E-44 336.9 18.8 260 301-576 31-324 (348)
205 3qyz_A Mitogen-activated prote 100.0 4.9E-39 1.7E-43 337.1 20.9 265 300-577 26-316 (364)
206 3nyv_A Calmodulin-domain prote 100.0 4.1E-39 1.4E-43 350.8 20.8 253 300-576 25-283 (484)
207 3mi9_A Cell division protein k 100.0 1.4E-39 4.7E-44 339.5 16.3 265 301-576 17-313 (351)
208 3mwu_A Calmodulin-domain prote 100.0 8.4E-39 2.9E-43 348.4 23.1 253 300-576 21-278 (486)
209 3q60_A ROP5B; pseudokinase, tr 100.0 4.1E-40 1.4E-44 346.2 12.0 255 301-575 62-353 (371)
210 2wtk_C Serine/threonine-protei 100.0 1.8E-38 6.2E-43 324.2 23.9 253 300-576 4-265 (305)
211 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-38 3.8E-43 348.9 23.4 253 300-576 35-303 (504)
212 2x7f_A TRAF2 and NCK-interacti 100.0 2.2E-39 7.4E-44 334.3 16.5 259 293-575 16-287 (326)
213 3pfq_A PKC-B, PKC-beta, protei 100.0 1.8E-39 6.3E-44 365.5 17.2 251 299-575 339-598 (674)
214 4e7w_A Glycogen synthase kinas 100.0 6.2E-40 2.1E-44 347.4 12.4 264 301-575 40-322 (394)
215 3e3p_A Protein kinase, putativ 100.0 5.3E-39 1.8E-43 336.2 19.2 274 294-575 16-315 (360)
216 3lij_A Calcium/calmodulin depe 100.0 1.1E-38 3.8E-43 348.1 22.5 252 300-575 36-292 (494)
217 1j1b_A Glycogen synthase kinas 100.0 3.1E-39 1.1E-43 344.8 17.7 262 301-576 54-338 (420)
218 2xrw_A Mitogen-activated prote 100.0 5.4E-39 1.9E-43 337.6 18.5 265 301-577 25-321 (371)
219 2ycf_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 332.3 16.7 254 300-576 9-276 (322)
220 1blx_A Cyclin-dependent kinase 100.0 3.5E-39 1.2E-43 332.7 16.0 266 299-575 9-297 (326)
221 3aln_A Dual specificity mitoge 100.0 3.6E-39 1.2E-43 332.9 16.1 258 301-575 22-286 (327)
222 3kvw_A DYRK2, dual specificity 100.0 4.8E-39 1.6E-43 344.2 17.6 198 301-510 97-303 (429)
223 1phk_A Phosphorylase kinase; g 100.0 2E-38 6.8E-43 322.7 21.3 253 300-575 16-284 (298)
224 2y4i_B KSR2, HKSR2, kinase sup 100.0 5.2E-39 1.8E-43 330.4 17.1 257 299-580 31-301 (319)
225 2b9h_A MAP kinase FUS3, mitoge 100.0 4.4E-39 1.5E-43 335.8 16.6 265 300-577 10-308 (353)
226 2fst_X Mitogen-activated prote 100.0 4.8E-39 1.6E-43 337.1 16.1 259 301-576 29-313 (367)
227 1wak_A Serine/threonine-protei 100.0 8.6E-39 2.9E-43 339.0 18.3 264 301-575 37-392 (397)
228 3cek_A Dual specificity protei 100.0 5.4E-39 1.9E-43 329.5 15.1 254 299-576 26-294 (313)
229 4exu_A Mitogen-activated prote 100.0 2.2E-38 7.4E-43 333.0 19.6 260 301-577 42-326 (371)
230 1zy4_A Serine/threonine-protei 100.0 1.4E-38 4.8E-43 324.2 17.6 253 300-576 5-285 (303)
231 3rgf_A Cyclin-dependent kinase 100.0 9.1E-39 3.1E-43 340.0 16.7 269 302-577 21-336 (405)
232 2wei_A Calmodulin-domain prote 100.0 7.8E-38 2.7E-42 316.8 22.0 253 299-575 20-277 (287)
233 1z57_A Dual specificity protei 100.0 6.1E-38 2.1E-42 324.8 20.3 259 301-575 14-329 (339)
234 3coi_A Mitogen-activated prote 100.0 6.7E-38 2.3E-42 327.1 19.9 258 301-576 24-307 (353)
235 1q8y_A SR protein kinase; tran 100.0 3.2E-38 1.1E-42 331.8 17.5 265 301-576 19-335 (373)
236 2i6l_A Mitogen-activated prote 100.0 2.8E-38 9.6E-43 324.7 16.7 262 301-575 11-306 (320)
237 2rio_A Serine/threonine-protei 100.0 2E-38 7E-43 340.0 16.1 254 302-576 16-297 (434)
238 2vx3_A Dual specificity tyrosi 100.0 1.2E-37 4.2E-42 328.6 21.7 200 300-509 53-261 (382)
239 2iwi_A Serine/threonine-protei 100.0 1.4E-38 4.8E-43 326.2 13.4 246 298-577 28-286 (312)
240 3a99_A Proto-oncogene serine/t 100.0 8.1E-39 2.8E-43 329.3 11.5 244 299-576 41-295 (320)
241 2dyl_A Dual specificity mitoge 100.0 1.2E-37 4.1E-42 319.9 19.2 252 301-575 25-284 (318)
242 3fhr_A MAP kinase-activated pr 100.0 6E-38 2.1E-42 325.0 17.0 254 300-576 27-289 (336)
243 2eu9_A Dual specificity protei 100.0 2.9E-37 1E-41 322.0 19.8 259 301-575 19-334 (355)
244 3qa8_A MGC80376 protein; kinas 100.0 1.6E-38 5.6E-43 350.9 10.5 261 300-572 13-295 (676)
245 3p23_A Serine/threonine-protei 100.0 1E-37 3.4E-42 333.8 15.3 250 301-576 24-285 (432)
246 3uqc_A Probable conserved tran 100.0 1.6E-36 5.3E-41 306.9 16.9 228 301-579 31-263 (286)
247 2pzi_A Probable serine/threoni 100.0 5.7E-37 2E-41 347.2 15.3 238 301-578 80-325 (681)
248 3dzo_A Rhoptry kinase domain; 100.0 6.2E-37 2.1E-41 326.3 10.2 244 301-575 78-364 (413)
249 3m2w_A MAP kinase-activated pr 100.0 1.3E-35 4.3E-40 302.4 18.3 227 301-575 17-257 (299)
250 2vuw_A Serine/threonine-protei 100.0 1E-36 3.4E-41 315.9 9.1 241 300-575 19-332 (336)
251 4azs_A Methyltransferase WBDD; 100.0 2.5E-29 8.5E-34 277.1 7.8 186 309-506 242-438 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 2.4E-26 8.1E-31 235.3 11.8 172 29-202 2-187 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 8.6E-27 3E-31 255.4 8.1 185 304-506 339-538 (540)
254 1zar_A RIO2 kinase; serine kin 99.9 1.2E-23 4.1E-28 211.4 10.2 154 293-479 82-252 (282)
255 3rgz_A Protein brassinosteroid 99.9 2.5E-23 8.7E-28 238.7 11.4 154 28-184 7-192 (768)
256 4ecn_A Leucine-rich repeat pro 99.9 3.3E-23 1.1E-27 237.4 9.0 174 28-206 264-565 (876)
257 4eco_A Uncharacterized protein 99.9 1.7E-22 5.9E-27 226.7 10.9 174 30-205 27-321 (636)
258 3e6j_A Variable lymphocyte rec 99.8 1.1E-20 3.7E-25 184.1 13.4 148 58-206 14-176 (229)
259 4fcg_A Uncharacterized protein 99.8 1.7E-21 5.8E-26 200.5 7.0 178 24-205 18-222 (328)
260 2v9t_B SLIT homolog 2 protein 99.8 5.7E-20 2E-24 177.7 12.2 146 61-206 9-169 (220)
261 2v70_A SLIT-2, SLIT homolog 2 99.8 1.4E-19 4.8E-24 175.0 11.8 146 61-206 9-170 (220)
262 2o6s_A Variable lymphocyte rec 99.8 4.3E-19 1.5E-23 170.0 14.1 146 61-206 5-165 (208)
263 1zth_A RIO1 serine protein kin 99.8 3E-19 1E-23 177.1 11.1 138 303-456 49-220 (258)
264 1w8a_A SLIT protein; signaling 99.8 1.2E-18 4.1E-23 164.6 9.5 146 61-206 6-166 (192)
265 3rgz_A Protein brassinosteroid 99.7 1.2E-18 3.9E-23 200.0 9.1 135 77-212 611-749 (768)
266 3m19_A Variable lymphocyte rec 99.7 8.1E-18 2.8E-22 166.1 11.7 130 75-204 36-170 (251)
267 3oja_A Leucine-rich immune mol 99.7 1.9E-19 6.4E-24 195.3 -2.2 123 75-202 100-227 (487)
268 2o6r_A Variable lymphocyte rec 99.7 2.1E-17 7.3E-22 153.8 11.2 127 62-188 6-142 (177)
269 3m19_A Variable lymphocyte rec 99.7 5.3E-17 1.8E-21 160.2 14.5 131 74-204 59-194 (251)
270 1ogq_A PGIP-2, polygalacturona 99.7 8.5E-18 2.9E-22 171.7 7.2 131 75-207 175-309 (313)
271 1w8a_A SLIT protein; signaling 99.7 3.5E-17 1.2E-21 154.5 10.7 127 77-206 11-143 (192)
272 2o6q_A Variable lymphocyte rec 99.7 8.8E-17 3E-21 160.5 13.1 129 75-203 38-171 (270)
273 3rfs_A Internalin B, repeat mo 99.7 1E-16 3.6E-21 160.1 13.1 131 75-205 86-221 (272)
274 4gyi_A RIO2 kinase; protein ki 99.7 3.5E-17 1.2E-21 168.8 8.7 148 296-456 90-266 (397)
275 2wfh_A SLIT homolog 2 protein 99.7 1.1E-16 3.9E-21 151.1 11.2 125 78-206 14-143 (193)
276 2wfh_A SLIT homolog 2 protein 99.7 1.5E-16 5.1E-21 150.3 11.4 123 62-185 9-141 (193)
277 2xot_A Amphoterin-induced prot 99.7 6.8E-17 2.3E-21 168.4 9.8 141 63-203 18-177 (361)
278 1p9a_G Platelet glycoprotein I 99.7 2.4E-16 8.2E-21 159.0 12.8 130 75-205 78-211 (290)
279 2o6q_A Variable lymphocyte rec 99.7 3.4E-16 1.2E-20 156.2 13.3 129 75-203 62-195 (270)
280 4g8a_A TOLL-like receptor 4; l 99.7 2.1E-16 7.2E-21 177.0 11.7 131 74-204 52-188 (635)
281 3v47_A TOLL-like receptor 5B a 99.6 3.5E-16 1.2E-20 168.3 12.0 133 75-207 276-413 (455)
282 1ozn_A Reticulon 4 receptor; N 99.6 2.6E-16 8.8E-21 158.3 9.1 128 75-202 81-214 (285)
283 2v70_A SLIT-2, SLIT homolog 2 99.6 5E-16 1.7E-20 149.9 9.9 114 74-187 57-170 (220)
284 2z66_A Variable lymphocyte rec 99.6 4.9E-16 1.7E-20 158.0 9.6 128 75-202 102-236 (306)
285 2o6r_A Variable lymphocyte rec 99.6 1.3E-15 4.5E-20 141.6 11.3 128 76-206 9-141 (177)
286 2ell_A Acidic leucine-rich nuc 99.6 9.2E-16 3.1E-20 141.4 9.5 129 74-204 24-162 (168)
287 3zyj_A Leucine-rich repeat-con 99.6 8E-16 2.7E-20 164.8 10.5 132 74-205 64-201 (440)
288 1ozn_A Reticulon 4 receptor; N 99.6 2.3E-15 7.9E-20 151.3 12.2 141 63-203 18-167 (285)
289 3zyi_A Leucine-rich repeat-con 99.6 1.7E-15 5.8E-20 162.8 11.5 131 74-204 75-211 (452)
290 3v47_A TOLL-like receptor 5B a 99.6 1.3E-15 4.5E-20 163.7 10.5 144 61-204 6-169 (455)
291 2z62_A TOLL-like receptor 4, v 99.6 3.2E-15 1.1E-19 149.6 12.6 128 75-202 29-162 (276)
292 3vq2_A TLR4, TOLL-like recepto 99.6 2.8E-15 9.6E-20 167.3 12.7 131 74-204 32-168 (606)
293 3g39_A Variable lymphocyte rec 99.6 2.9E-15 1E-19 138.3 10.6 109 77-188 12-120 (170)
294 2v9t_B SLIT homolog 2 protein 99.6 3E-15 1E-19 144.5 10.8 111 74-184 56-166 (220)
295 2z80_A TOLL-like receptor 2, v 99.6 1.3E-15 4.5E-20 158.1 8.7 141 60-202 27-187 (353)
296 4b8c_D Glucose-repressible alc 99.6 2.9E-16 9.9E-21 178.1 3.9 124 75-202 225-354 (727)
297 4g8a_A TOLL-like receptor 4; l 99.6 1.8E-15 6.1E-20 169.5 10.1 133 75-207 446-585 (635)
298 3rfs_A Internalin B, repeat mo 99.6 7.8E-15 2.7E-19 146.4 13.3 129 75-205 64-197 (272)
299 4fcg_A Uncharacterized protein 99.6 2.6E-15 8.8E-20 154.2 10.0 126 75-203 128-267 (328)
300 2je0_A Acidic leucine-rich nuc 99.6 1.3E-15 4.5E-20 137.3 6.8 111 75-187 18-130 (149)
301 1p9a_G Platelet glycoprotein I 99.6 5.3E-15 1.8E-19 149.1 12.0 129 74-205 31-164 (290)
302 2r9u_A Variable lymphocyte rec 99.6 6.8E-15 2.3E-19 136.4 11.8 109 77-188 15-123 (174)
303 2z81_A CD282 antigen, TOLL-lik 99.6 1.7E-15 6E-20 166.8 8.7 140 62-202 3-161 (549)
304 2o6s_A Variable lymphocyte rec 99.6 7.5E-15 2.6E-19 140.3 11.8 126 74-201 52-177 (208)
305 2id5_A Lingo-1, leucine rich r 99.6 5.4E-15 1.8E-19 160.0 11.5 141 64-204 12-167 (477)
306 3vq2_A TLR4, TOLL-like recepto 99.6 2.8E-15 9.5E-20 167.3 9.2 132 75-207 425-563 (606)
307 3e6j_A Variable lymphocyte rec 99.6 1.1E-14 3.9E-19 141.3 12.4 114 74-188 64-177 (229)
308 2z62_A TOLL-like receptor 4, v 99.6 4.5E-15 1.6E-19 148.4 9.2 114 75-188 53-167 (276)
309 3j0a_A TOLL-like receptor 5; m 99.6 2.4E-15 8.1E-20 174.3 8.1 131 75-207 427-565 (844)
310 3oja_B Anopheles plasmodium-re 99.6 5.3E-15 1.8E-19 164.7 10.4 152 51-203 8-185 (597)
311 2z66_A Variable lymphocyte rec 99.6 2.2E-15 7.6E-20 153.1 5.9 141 61-202 5-163 (306)
312 3zyj_A Leucine-rich repeat-con 99.5 1E-14 3.5E-19 156.2 10.9 130 75-206 137-296 (440)
313 2ft3_A Biglycan; proteoglycan, 99.5 2.5E-14 8.6E-19 147.1 12.8 140 62-204 32-187 (332)
314 2xwt_C Thyrotropin receptor; s 99.5 6.9E-15 2.4E-19 143.8 7.8 128 74-203 31-170 (239)
315 3t6q_A CD180 antigen; protein- 99.5 1.7E-14 5.7E-19 161.0 11.3 130 74-203 33-167 (606)
316 3t6q_A CD180 antigen; protein- 99.5 8.4E-15 2.9E-19 163.4 8.8 130 75-205 426-563 (606)
317 3zyi_A Leucine-rich repeat-con 99.5 1.8E-14 6.3E-19 154.7 10.9 130 75-206 148-307 (452)
318 3o6n_A APL1; leucine-rich repe 99.5 1.2E-14 4.2E-19 152.9 9.2 130 74-203 45-179 (390)
319 2z63_A TOLL-like receptor 4, v 99.5 1.3E-14 4.4E-19 160.5 9.6 130 76-205 398-534 (570)
320 1ziw_A TOLL-like receptor 3; i 99.5 2.9E-14 1E-18 161.3 12.0 130 74-203 25-159 (680)
321 1xku_A Decorin; proteoglycan, 99.5 4.3E-14 1.5E-18 145.2 12.1 139 62-203 30-185 (330)
322 4eco_A Uncharacterized protein 99.5 5E-15 1.7E-19 166.0 4.9 131 74-205 206-369 (636)
323 3j0a_A TOLL-like receptor 5; m 99.5 2.4E-14 8.3E-19 165.8 10.6 139 63-202 14-161 (844)
324 1dce_A Protein (RAB geranylger 99.5 2.2E-14 7.4E-19 157.9 9.3 110 75-189 442-552 (567)
325 3g39_A Variable lymphocyte rec 99.5 6.5E-14 2.2E-18 129.2 9.9 105 99-206 10-119 (170)
326 4ezg_A Putative uncharacterize 99.5 3.2E-14 1.1E-18 134.7 7.7 103 75-181 45-147 (197)
327 2z63_A TOLL-like receptor 4, v 99.5 6.4E-14 2.2E-18 154.9 11.4 130 74-203 28-163 (570)
328 3oja_B Anopheles plasmodium-re 99.5 8.5E-14 2.9E-18 154.9 11.9 129 74-202 75-205 (597)
329 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 7E-14 2.4E-18 154.5 11.1 131 75-205 354-513 (562)
330 3cvr_A Invasion plasmid antige 99.5 1.2E-14 4E-19 159.3 4.8 136 51-204 32-175 (571)
331 2ifg_A High affinity nerve gro 99.5 7E-14 2.4E-18 144.7 10.2 131 63-207 8-146 (347)
332 1ziw_A TOLL-like receptor 3; i 99.5 5.7E-14 1.9E-18 158.9 10.2 132 75-207 481-627 (680)
333 2z7x_B TOLL-like receptor 1, v 99.5 5.7E-14 1.9E-18 153.7 9.8 107 75-183 325-434 (520)
334 2xot_A Amphoterin-induced prot 99.5 6.1E-14 2.1E-18 146.0 9.2 132 74-206 64-206 (361)
335 3o53_A Protein LRIM1, AGAP0063 99.5 4.6E-14 1.6E-18 144.1 8.0 124 75-203 100-228 (317)
336 4ezg_A Putative uncharacterize 99.5 6.4E-14 2.2E-18 132.6 8.3 122 75-201 67-193 (197)
337 2r9u_A Variable lymphocyte rec 99.5 1.4E-13 4.7E-18 127.5 10.2 103 101-206 15-122 (174)
338 4ecn_A Leucine-rich repeat pro 99.5 2.8E-14 9.5E-19 163.6 6.1 130 74-205 448-611 (876)
339 3o6n_A APL1; leucine-rich repe 99.5 2.1E-13 7.1E-18 143.5 12.0 128 74-202 69-199 (390)
340 2ell_A Acidic leucine-rich nuc 99.5 4.9E-14 1.7E-18 129.7 6.0 107 75-184 50-161 (168)
341 1wwl_A Monocyte differentiatio 99.4 1.5E-14 5.1E-19 147.4 2.6 108 76-184 65-187 (312)
342 2id5_A Lingo-1, leucine rich r 99.4 8.4E-14 2.9E-18 150.6 8.5 130 74-203 56-190 (477)
343 1xku_A Decorin; proteoglycan, 99.4 1.9E-13 6.6E-18 140.3 10.4 128 74-205 145-279 (330)
344 1wwl_A Monocyte differentiatio 99.4 3.6E-14 1.2E-18 144.7 4.7 128 75-203 96-242 (312)
345 4glp_A Monocyte differentiatio 99.4 1.1E-13 3.8E-18 140.9 7.8 110 75-185 118-239 (310)
346 2z80_A TOLL-like receptor 2, v 99.4 9.4E-14 3.2E-18 144.1 7.1 127 74-201 76-210 (353)
347 2z7x_B TOLL-like receptor 1, v 99.4 1.7E-13 5.7E-18 150.0 9.1 130 75-206 303-438 (520)
348 2xwt_C Thyrotropin receptor; s 99.4 2E-13 7E-18 133.3 7.6 126 74-202 55-193 (239)
349 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 4.3E-13 1.5E-17 148.2 10.6 130 75-206 332-467 (562)
350 1a9n_A U2A', U2A'; complex (nu 99.4 2.8E-13 9.5E-18 125.7 7.7 108 75-188 20-130 (176)
351 3oja_A Leucine-rich immune mol 99.4 1.3E-13 4.6E-18 149.2 6.2 128 75-204 59-206 (487)
352 2ft3_A Biglycan; proteoglycan, 99.4 8.9E-13 3.1E-17 135.4 11.9 125 76-204 125-256 (332)
353 4b8c_D Glucose-repressible alc 99.4 2.4E-13 8.2E-18 154.2 8.1 169 31-203 130-330 (727)
354 2z81_A CD282 antigen, TOLL-lik 99.4 2.1E-13 7E-18 150.2 7.0 127 74-200 50-183 (549)
355 1xeu_A Internalin C; cellular 99.4 6.1E-13 2.1E-17 131.9 9.1 120 75-204 64-187 (263)
356 4glp_A Monocyte differentiatio 99.4 1.8E-13 6E-18 139.3 5.0 130 75-204 92-239 (310)
357 2je0_A Acidic leucine-rich nuc 99.4 1.1E-13 3.9E-18 124.5 2.9 104 74-179 42-149 (149)
358 1a9n_A U2A', U2A'; complex (nu 99.4 1.6E-13 5.6E-18 127.3 3.2 105 75-183 43-153 (176)
359 1h6t_A Internalin B; cell adhe 99.4 1.4E-12 4.7E-17 131.4 9.8 120 75-203 69-192 (291)
360 2ifg_A High affinity nerve gro 99.4 8.3E-13 2.8E-17 136.5 8.4 104 101-206 11-120 (347)
361 1xeu_A Internalin C; cellular 99.3 2.5E-12 8.4E-17 127.5 10.6 120 75-204 42-165 (263)
362 1h6t_A Internalin B; cell adhe 99.3 1.4E-12 4.9E-17 131.3 8.3 122 74-204 90-215 (291)
363 1h6u_A Internalin H; cell adhe 99.3 1.4E-12 4.7E-17 132.6 7.5 123 74-205 85-211 (308)
364 1h6u_A Internalin H; cell adhe 99.3 3.5E-12 1.2E-16 129.6 10.0 121 75-204 64-188 (308)
365 4ay9_X Follicle-stimulating ho 99.3 2.3E-12 7.9E-17 133.4 8.8 141 63-203 9-168 (350)
366 1m9s_A Internalin B; cell inva 99.3 4.7E-12 1.6E-16 140.1 10.8 120 75-203 66-189 (605)
367 1ds9_A Outer arm dynein; leuci 99.3 6.5E-15 2.2E-19 139.6 -10.6 109 75-188 49-158 (198)
368 3o53_A Protein LRIM1, AGAP0063 99.3 2E-12 7E-17 131.9 7.2 120 75-202 81-204 (317)
369 4fmz_A Internalin; leucine ric 99.3 3.2E-12 1.1E-16 132.0 8.5 122 75-204 200-326 (347)
370 3cvr_A Invasion plasmid antige 99.3 1E-11 3.4E-16 136.1 12.8 114 75-205 81-196 (571)
371 1m9s_A Internalin B; cell inva 99.3 4.3E-12 1.5E-16 140.4 9.3 123 74-205 87-213 (605)
372 3g06_A SSPH2 (leucine-rich rep 99.3 2.5E-12 8.5E-17 142.6 5.8 137 50-203 10-155 (622)
373 3tm0_A Aminoglycoside 3'-phosp 99.3 2.1E-11 7.3E-16 120.6 12.0 147 296-453 9-212 (263)
374 1dce_A Protein (RAB geranylger 99.3 7.3E-12 2.5E-16 137.7 9.2 103 99-206 442-550 (567)
375 1o6v_A Internalin A; bacterial 99.2 8.6E-12 3E-16 134.4 8.7 103 75-185 244-346 (466)
376 1ds9_A Outer arm dynein; leuci 99.2 8.1E-14 2.8E-18 132.0 -7.3 126 75-205 19-156 (198)
377 1jl5_A Outer protein YOPM; leu 99.2 7.1E-11 2.4E-15 126.6 13.0 116 75-203 132-251 (454)
378 3bz5_A Internalin-J, INLJ; leu 99.2 5.9E-11 2E-15 127.3 12.2 99 75-184 43-141 (457)
379 1o6v_A Internalin A; bacterial 99.2 2.9E-11 9.9E-16 130.2 9.4 123 74-204 221-346 (466)
380 4fmz_A Internalin; leucine ric 99.2 2.4E-11 8.4E-16 125.3 8.4 119 75-202 178-300 (347)
381 1jl5_A Outer protein YOPM; leu 99.2 1E-10 3.4E-15 125.4 12.5 96 98-202 131-228 (454)
382 3bz5_A Internalin-J, INLJ; leu 99.2 1.2E-10 4.2E-15 124.8 12.7 118 74-204 127-248 (457)
383 1nd4_A Aminoglycoside 3'-phosp 99.2 5.4E-11 1.9E-15 117.3 9.0 137 302-454 21-214 (264)
384 2ca6_A RAN GTPase-activating p 99.1 2.6E-12 8.8E-17 134.9 -2.5 110 75-184 123-258 (386)
385 2ast_B S-phase kinase-associat 99.1 3.2E-12 1.1E-16 131.4 -2.9 134 61-199 35-178 (336)
386 3dxp_A Putative acyl-COA dehyd 99.1 3.6E-10 1.2E-14 117.3 12.1 142 306-454 43-248 (359)
387 3g06_A SSPH2 (leucine-rich rep 99.1 2.8E-10 9.5E-15 126.1 11.5 55 146-205 221-277 (622)
388 3goz_A Leucine-rich repeat-con 99.1 1.2E-11 4E-16 128.7 -0.0 128 75-202 23-180 (362)
389 2ast_B S-phase kinase-associat 99.1 1.3E-11 4.3E-16 126.8 -0.2 110 74-184 70-183 (336)
390 2ca6_A RAN GTPase-activating p 99.1 7.8E-12 2.7E-16 131.2 -2.2 130 74-203 159-317 (386)
391 3goz_A Leucine-rich repeat-con 99.0 1.1E-11 3.7E-16 128.9 -1.7 113 75-187 52-184 (362)
392 4ay9_X Follicle-stimulating ho 99.0 2.2E-10 7.4E-15 118.5 8.2 110 78-190 13-124 (350)
393 3sg8_A APH(2'')-ID; antibiotic 98.9 1E-09 3.4E-14 111.1 6.2 186 306-507 25-288 (304)
394 3rw6_A Nuclear RNA export fact 98.9 4.9E-11 1.7E-15 117.1 -5.3 125 61-188 76-238 (267)
395 1z7x_W Ribonuclease inhibitor; 98.8 3.5E-11 1.2E-15 129.3 -7.5 111 75-185 228-356 (461)
396 1z7x_W Ribonuclease inhibitor; 98.7 2.3E-10 7.9E-15 122.8 -5.4 129 74-202 256-411 (461)
397 3un9_A NLR family member X1; l 98.7 3.1E-10 1.1E-14 118.1 -5.4 128 74-201 101-251 (372)
398 3un9_A NLR family member X1; l 98.7 9.5E-10 3.3E-14 114.4 -2.5 111 75-185 127-254 (372)
399 3rw6_A Nuclear RNA export fact 98.6 2.9E-09 1E-13 104.4 -0.1 80 95-176 167-257 (267)
400 3r70_A Aminoglycoside phosphot 98.6 3.2E-07 1.1E-11 93.3 12.7 136 302-454 38-237 (320)
401 1io0_A Tropomodulin; LRR prote 98.5 6.3E-09 2.2E-13 96.9 -2.8 110 74-183 36-164 (185)
402 3d1u_A Putative fructosamine-3 98.5 1.1E-06 3.7E-11 87.8 12.7 142 305-453 19-215 (288)
403 3sb4_A Hypothetical leucine ri 98.5 2.3E-07 7.8E-12 94.7 7.8 100 75-176 227-327 (329)
404 3sb4_A Hypothetical leucine ri 98.3 7.4E-07 2.5E-11 90.9 8.6 127 75-204 102-312 (329)
405 3ogk_B Coronatine-insensitive 98.3 1.3E-08 4.4E-13 112.8 -6.3 127 75-201 379-525 (592)
406 3tdw_A Gentamicin resistance p 98.3 4.3E-06 1.5E-10 84.3 12.5 136 306-454 24-224 (306)
407 4gkh_A Aminoglycoside 3'-phosp 98.3 3.3E-06 1.1E-10 83.3 11.4 135 308-454 31-223 (272)
408 3ats_A Putative uncharacterize 98.2 2.8E-06 9.5E-11 87.6 9.8 81 307-387 26-122 (357)
409 3ovc_A Hygromycin-B 4-O-kinase 98.2 5E-06 1.7E-10 85.9 11.6 143 305-454 45-243 (362)
410 3ogk_B Coronatine-insensitive 98.1 3.3E-07 1.1E-11 101.4 0.4 104 75-179 139-252 (592)
411 2q83_A YTAA protein; 2635576, 98.0 2.3E-05 7.9E-10 80.0 12.1 141 307-453 38-251 (346)
412 1io0_A Tropomodulin; LRR prote 98.0 3E-07 1E-11 85.4 -2.3 98 87-184 25-137 (185)
413 2ra8_A Uncharacterized protein 98.0 6E-07 2.1E-11 92.5 -0.9 107 74-184 172-293 (362)
414 2olc_A MTR kinase, methylthior 98.0 3.7E-05 1.3E-09 80.4 12.0 76 306-383 35-120 (397)
415 2p1m_B Transport inhibitor res 97.9 1.1E-07 3.7E-12 105.3 -8.4 63 120-183 430-494 (594)
416 2p1m_B Transport inhibitor res 97.9 3E-07 1E-11 101.7 -5.6 89 94-183 428-519 (594)
417 3jr1_A Putative fructosamine-3 97.7 0.0002 6.9E-09 71.9 11.9 139 306-450 41-232 (312)
418 4fdw_A Leucine rich hypothetic 97.7 5.7E-05 1.9E-09 79.0 7.8 122 75-201 227-357 (401)
419 3e4g_A ATP synthase subunit S, 97.6 7.7E-06 2.6E-10 74.4 0.1 83 99-181 62-150 (176)
420 2pyw_A Uncharacterized protein 97.6 0.00031 1.1E-08 73.9 11.9 78 423-502 231-312 (420)
421 3f7w_A Putative fructosamine-3 97.5 0.00028 9.7E-09 70.1 9.9 79 302-385 16-97 (288)
422 4fdw_A Leucine rich hypothetic 97.5 0.00027 9.3E-09 73.8 9.6 105 75-184 204-313 (401)
423 3dxq_A Choline/ethanolamine ki 97.4 0.00049 1.7E-08 68.8 10.1 71 306-385 23-95 (301)
424 3e4g_A ATP synthase subunit S, 97.4 2.1E-05 7.1E-10 71.5 -0.3 85 75-159 62-153 (176)
425 2ra8_A Uncharacterized protein 97.3 3.4E-05 1.2E-09 79.4 0.4 125 74-201 139-291 (362)
426 1pgv_A TMD-1, tropomodulin TMD 97.3 1.8E-05 6E-10 73.4 -1.8 108 75-182 42-169 (197)
427 2ppq_A HSK, HK, homoserine kin 97.3 0.0016 5.5E-08 65.6 12.6 159 291-453 7-216 (322)
428 3csv_A Aminoglycoside phosphot 97.2 0.0016 5.5E-08 66.0 11.4 142 307-454 24-217 (333)
429 1nw1_A Choline kinase (49.2 KD 97.1 0.0011 3.8E-08 69.8 9.4 72 307-385 79-159 (429)
430 1zyl_A Hypothetical protein YI 97.1 0.0048 1.6E-07 62.2 13.4 159 291-454 11-223 (328)
431 3feg_A Choline/ethanolamine ki 97.0 0.0022 7.6E-08 66.1 10.3 142 307-454 56-254 (379)
432 3rfe_A Platelet glycoprotein I 97.0 0.00074 2.5E-08 58.3 5.4 55 102-158 12-67 (130)
433 3rfe_A Platelet glycoprotein I 97.0 0.00083 2.8E-08 57.9 5.6 56 78-135 12-68 (130)
434 1pgv_A TMD-1, tropomodulin TMD 96.9 0.00015 5.1E-09 67.1 -0.2 92 90-181 33-137 (197)
435 3c5i_A Choline kinase; choline 96.8 0.0026 8.9E-08 65.5 8.4 73 307-385 39-121 (369)
436 2qg7_A Ethanolamine kinase PV0 96.8 0.0076 2.6E-07 63.8 11.8 74 306-385 113-188 (458)
437 3i1a_A Spectinomycin phosphotr 96.5 0.02 6.7E-07 58.1 12.3 31 424-454 206-236 (339)
438 4gt6_A Cell surface protein; l 96.5 0.0057 2E-07 63.5 8.5 87 92-181 282-368 (394)
439 2yle_A Protein spire homolog 1 96.3 0.048 1.6E-06 50.7 12.3 103 383-505 33-135 (229)
440 4h09_A Hypothetical leucine ri 96.2 0.0063 2.2E-07 62.7 7.0 102 75-179 218-319 (379)
441 4fs7_A Uncharacterized protein 96.1 0.0056 1.9E-07 63.6 5.7 87 91-180 290-376 (394)
442 4gt6_A Cell surface protein; l 96.0 0.0061 2.1E-07 63.3 5.9 103 75-183 289-391 (394)
443 3f2s_A CK, chetk-alpha, cholin 95.7 0.04 1.4E-06 56.9 10.4 144 307-454 58-280 (401)
444 4fs7_A Uncharacterized protein 95.5 0.013 4.6E-07 60.7 5.9 102 75-183 254-355 (394)
445 4h09_A Hypothetical leucine ri 95.0 0.053 1.8E-06 55.6 8.4 89 92-183 211-299 (379)
446 3mes_A Choline kinase; malaria 94.3 0.12 4E-06 53.9 9.0 141 307-454 76-291 (424)
447 3g15_A CK, chetk-alpha, cholin 91.0 0.094 3.2E-06 54.4 2.8 30 425-454 245-280 (401)
448 2ks1_B Epidermal growth factor 89.8 0.14 4.7E-06 34.2 1.7 32 238-269 10-41 (44)
449 2l2t_A Receptor tyrosine-prote 87.6 0.17 5.7E-06 33.7 0.9 31 239-269 10-40 (44)
450 4ann_A ESSB; membrane protein, 85.2 1.6 5.5E-05 40.4 6.6 116 356-507 43-158 (215)
451 3cxl_A N-chimerin; SH2, RHO-GA 84.3 0.12 4.2E-06 54.6 -1.5 61 305-368 146-214 (463)
452 4ano_A ESSB; membrane protein, 83.8 2.7 9.4E-05 39.0 7.5 115 356-507 48-163 (219)
453 2jwa_A Receptor tyrosine-prote 81.3 0.51 1.7E-05 31.3 1.1 28 242-269 14-41 (44)
454 2k1k_A Ephrin type-A receptor 59.5 3.2 0.00011 26.6 1.0 15 242-256 13-27 (38)
455 2k9y_A Ephrin type-A receptor 57.9 3.1 0.0001 27.1 0.8 14 240-253 14-27 (41)
456 3ls8_A Phosphatidylinositol 3- 50.6 1.3E+02 0.0046 32.2 12.4 47 400-453 453-501 (614)
457 2lz0_A Uncharacterized protein 45.9 35 0.0012 27.0 5.5 45 86-131 8-52 (100)
458 1iij_A ERBB-2 receptor protein 41.4 5.1 0.00017 25.0 -0.2 21 246-266 14-34 (35)
459 2lz0_A Uncharacterized protein 38.5 60 0.0021 25.6 5.8 46 109-155 7-52 (100)
460 2x6h_A GH13170P, VPS34, phosph 31.7 99 0.0034 33.9 7.8 45 402-453 529-575 (696)
461 3ox7_P MH027; urokinase-type p 26.1 16 0.00054 19.5 0.2 9 61-69 6-14 (23)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.1e-55 Score=444.92 Aligned_cols=257 Identities=21% Similarity=0.308 Sum_probs=212.3
Q ss_pred CCCcCCceeccCCeEEEEEEeC------CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEE
Q 006968 302 NFSAKNILGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (623)
Q Consensus 302 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 375 (623)
++.+.+.||+|+||+||+|.+. +++.||||+++........++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 4556788999999999999863 4688999999876555556789999999999999999999999999999999
Q ss_pred EEecccCCChhhhhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCc
Q 006968 376 VYPYMPNGSVASRLRDHIH------------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE 443 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 443 (623)
||||+++|+|.++|+.... ....++|..+.+|+.|||+||+|||++ +||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 9999999999999975321 124699999999999999999999999 9999999999999999999
Q ss_pred EEEeecccccccCCCCC-ceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHH
Q 006968 444 AVVGDFGLAKLLDHRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDW 521 (623)
Q Consensus 444 ~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 521 (623)
+||+|||+++....... .......||++|||||++.++.++.++|||||||++|||+| |+.||..... .+.
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-------~~~ 256 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-------QDV 256 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-------HHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-------HHH
Confidence 99999999987644322 23345679999999999999999999999999999999999 8999864321 112
Q ss_pred HHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 522 VKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
+..+. .+.. ...+..++.++.+++.+||+.||++||||.||+++|+.
T Consensus 257 ~~~i~-~~~~---------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 257 VEMIR-NRQV---------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp HHHHH-TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHH-cCCC---------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 22221 1211 11233455789999999999999999999999999986
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=8.4e-55 Score=440.74 Aligned_cols=257 Identities=26% Similarity=0.427 Sum_probs=211.1
Q ss_pred cCCCcCCceeccCCeEEEEEEeC------CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERL 374 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 374 (623)
++|.+.+.||+|+||+||+|.+. ++..||||+++... ....++|.+|++++++++|||||+++|+|.+++..+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 46778899999999999999863 47889999997543 334567999999999999999999999999999999
Q ss_pred EEEecccCCChhhhhhhcc---------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEE
Q 006968 375 LVYPYMPNGSVASRLRDHI---------HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV 445 (623)
Q Consensus 375 lv~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 445 (623)
+||||+++|+|.++|+... .....++|.++..++.|+|+||+|||++ +||||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEE
Confidence 9999999999999997642 2245799999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCCce-eeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHH
Q 006968 446 VGDFGLAKLLDHRDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVK 523 (623)
Q Consensus 446 l~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 523 (623)
|+|||+|+......... .....||+.|||||++.+..++.++|||||||++|||+| |+.||..... .+.+.
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-------~~~~~ 241 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-------NEVIE 241 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHHHH
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHH
Confidence 99999998765433322 233469999999999999999999999999999999999 8999964321 12222
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 524 KLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.+.. +.. ...+..++.++.+++.+||+.||++||||.||++.|++
T Consensus 242 ~i~~-~~~---------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~ 286 (299)
T 4asz_A 242 CITQ-GRV---------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQN 286 (299)
T ss_dssp HHHH-TCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHc-CCC---------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 2222 211 11233345789999999999999999999999999976
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.8e-54 Score=441.96 Aligned_cols=257 Identities=26% Similarity=0.413 Sum_probs=205.1
Q ss_pred cCCCcCCceeccCCeEEEEEEeC------CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERL 374 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 374 (623)
++|.+.+.||+|+||+||+|.+. ++..||||+++... ....++|.+|++++++++|||||+++|+|.+++..+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 45667789999999999999864 47899999997543 334567999999999999999999999999999999
Q ss_pred EEEecccCCChhhhhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCc
Q 006968 375 LVYPYMPNGSVASRLRDHIH-----------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE 443 (623)
Q Consensus 375 lv~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 443 (623)
+||||+++|+|.++++.... ...+++|.++..|+.|+|+||+|||++ +||||||||+|||+++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 99999999999999986432 134699999999999999999999999 9999999999999999999
Q ss_pred EEEeecccccccCCCCC-ceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHH
Q 006968 444 AVVGDFGLAKLLDHRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDW 521 (623)
Q Consensus 444 ~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 521 (623)
+||+|||+++....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||..... .+.
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~-------~~~ 269 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-------TEA 269 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH-------HHH
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH-------HHH
Confidence 99999999987654332 23345679999999999999999999999999999999999 8999964321 112
Q ss_pred HHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 522 VKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
+..+....+ ...+..++.++.+++.+||+.||++||||.||+++|+.
T Consensus 270 ~~~i~~g~~----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~ 316 (329)
T 4aoj_A 270 IDCITQGRE----------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQA 316 (329)
T ss_dssp HHHHHHTCC----------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHH
T ss_pred HHHHHcCCC----------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 222222111 11233345789999999999999999999999999987
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-53 Score=431.91 Aligned_cols=257 Identities=29% Similarity=0.422 Sum_probs=202.4
Q ss_pred cCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
+++.+.+.||+|+||+||+|.+++ .||||+++..... .....|.+|++++++++|||||+++|+|.. +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 567788999999999999998743 5999999754332 334579999999999999999999998864 578999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 459 (623)
+++|+|.++|+.. ...++|..+..|+.|+|+||+|||++ +||||||||+|||+++++.+||+|||+|+......
T Consensus 113 ~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 113 CEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred CCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 9999999999754 34699999999999999999999999 99999999999999999999999999998765432
Q ss_pred -Cceeecccccccccccccccc---CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccc
Q 006968 460 -SHVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMV 535 (623)
Q Consensus 460 -~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (623)
.......+||+.|||||++.+ +.++.++|||||||++|||+||+.||...... ..+......+..
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~-------~~~~~~~~~~~~---- 255 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-------DQIIFMVGRGYA---- 255 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------HHHHHHHHTTCC----
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH-------HHHHHHHhcCCC----
Confidence 223445679999999999864 45899999999999999999999999643211 111122221111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 536 DKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.+.+ ...+..++.++.+++.+||+.||++||||.||+++|+.
T Consensus 256 ~p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~ 297 (307)
T 3omv_A 256 SPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp CCCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHH
T ss_pred CCCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 1111 11223345789999999999999999999999999875
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.6e-51 Score=421.89 Aligned_cols=250 Identities=22% Similarity=0.298 Sum_probs=208.8
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
+.|+..+.||+|+||+||+|... +|+.||||+++... ......+.+|+++++.++|||||++++++.+++..||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 45888899999999999999975 69999999997544 33455689999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 459 (623)
+++|+|.+++.. ..+++..+..++.|++.||+|||++ +||||||||+|||++.++.+||+|||+|+.+....
T Consensus 153 ~~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 153 LEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp CTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 999999999875 2599999999999999999999999 99999999999999999999999999998775432
Q ss_pred CceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccccc
Q 006968 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539 (623)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (623)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+.+..+..... +.+
T Consensus 225 -~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~~~~~i~~~~~------~~~ 290 (346)
T 4fih_A 225 -PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LKAMKMIRDNLP------PRL 290 (346)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSSC------CCC
T ss_pred -CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHcCCC------CCC
Confidence 234456799999999999999999999999999999999999999964322 111222211110 011
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
. .....+.++.+++.+||..||++|||+.|++++
T Consensus 291 ~--~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 291 K--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp S--CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred C--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0 112234678999999999999999999999875
No 6
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=9.9e-53 Score=434.88 Aligned_cols=267 Identities=25% Similarity=0.360 Sum_probs=216.8
Q ss_pred HHHHHHHhcCCCcCCceeccCCeEEEEEEeCC------CcEEEEEEecccccccchHHHHHHHHHHhhcCC-Cceeeeee
Q 006968 293 FKELRAATSNFSAKNILGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVH-RNLLRLCG 365 (623)
Q Consensus 293 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~~ 365 (623)
..+++...++|++.+.||+|+||+||+|.+.. ++.||||+++.........+|.+|++++.++.| ||||+++|
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 34444556789999999999999999998632 468999999876655556689999999999976 89999999
Q ss_pred eeecC-CceEEEEecccCCChhhhhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCC
Q 006968 366 FCSTE-NERLLVYPYMPNGSVASRLRDHIH------------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVK 432 (623)
Q Consensus 366 ~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk 432 (623)
+|..+ +..++|||||++|+|.++|+.... ....++|..+..++.|||+||+|||++ +|||||||
T Consensus 136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK 212 (353)
T 4ase_A 136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLA 212 (353)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccC
Confidence 99764 568999999999999999976422 134589999999999999999999999 99999999
Q ss_pred CCCeEECCCCcEEEeecccccccCCCCCc-eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCccc
Q 006968 433 AANILLDEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGR 510 (623)
Q Consensus 433 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~ 510 (623)
|+|||+++++.+||+|||+|+.+...... ......||+.|||||++.+..++.++|||||||++|||+| |+.||....
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~ 292 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999976544333 3445679999999999999999999999999999999998 899996422
Q ss_pred ccccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 511 AANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.. ....+.+ ..+. ....+..++.++.+++.+||+.||++|||+.||+++|+.
T Consensus 293 ~~------~~~~~~i-~~g~---------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ 344 (353)
T 4ase_A 293 ID------EEFCRRL-KEGT---------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 344 (353)
T ss_dssp CS------HHHHHHH-HHTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HH------HHHHHHH-HcCC---------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 11 1111222 1121 111223345779999999999999999999999999976
No 7
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-51 Score=419.81 Aligned_cols=266 Identities=24% Similarity=0.338 Sum_probs=201.6
Q ss_pred cCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCC----ceEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN----ERLLV 376 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~lv 376 (623)
++|.+.+.||+|+||+||+|.+ +|+.||||+++... .....+..|+..+.+++|||||+++|+|..++ ..++|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~--~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc--hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 4577789999999999999998 68999999996532 11222345666667889999999999997654 57999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEecCCCCCCeEECCCCcEEEeeccc
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ-----CDPKIIHRDVKAANILLDEDFEAVVGDFGL 451 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-----~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgl 451 (623)
|||+++|+|.++|+.. .++|..+.+++.|+++||+|||++ +.++||||||||+|||++.++++||+|||+
T Consensus 80 ~Ey~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl 154 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ecCCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence 9999999999999763 599999999999999999999986 356899999999999999999999999999
Q ss_pred ccccCCCCCce---eeccccccccccccccccC------CCCCccchhhHHHHHHHHHhCCCCCCccccccc-------c
Q 006968 452 AKLLDHRDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELITGQRALDFGRAANQ-------R 515 (623)
Q Consensus 452 a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~-------~ 515 (623)
|+......... ....+||+.|||||++.+. .++.++|||||||++|||+||+.|+........ .
T Consensus 155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~ 234 (303)
T 3hmm_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp CEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred CccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccc
Confidence 98775543322 2345799999999998754 467899999999999999999888753221110 0
Q ss_pred cchHHHHHHHhhcCccccccccccCCCC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 516 GVMLDWVKKLHQEGKLSQMVDKDLKGNF-DRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
......+......+.. ++.+.... ....+..+.+++.+||+.||++||||.||++.|+.
T Consensus 235 ~~~~~~~~~~~~~~~~----rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 235 DPSVEEMRKVVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp SCCHHHHHHHHTTSCC----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred cchHHHHHHHHhcccC----CCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 0111222222222211 12221111 23456789999999999999999999999999976
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.9e-52 Score=429.47 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=204.4
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
++|.+.+.||+|+||+||+|... +|+.||||+++..... .....|.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57999999999999999999975 6999999999765433 234579999999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++|+|.+++... ....+++..++.++.|++.||+|||++ +||||||||+|||++.++.+||+|||+|+.+...
T Consensus 104 y~~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 99999999999753 234679999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccccc
Q 006968 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKD 538 (623)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (623)
. ......+||+.|||||++.+..|+.++|||||||++|||+||+.||..... .+.+..+.. +... .
T Consensus 179 ~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-------~~~~~~i~~-~~~~-----~ 244 (350)
T 4b9d_A 179 V-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-------KNLVLKIIS-GSFP-----P 244 (350)
T ss_dssp H-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHH-TCCC-----C
T ss_pred c-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHc-CCCC-----C
Confidence 1 223456799999999999999999999999999999999999999974322 122222222 1111 1
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 539 LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.+...+.++.+++.+||..||++|||+.|++++
T Consensus 245 ----~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 245 ----VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp ----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 112234678999999999999999999999875
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.4e-51 Score=419.40 Aligned_cols=250 Identities=22% Similarity=0.238 Sum_probs=204.0
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
+.|...+.||+|+||+||+|... +|+.||||+++... ...+|+.+++.++|||||++++++.+++..++||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~------~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV------FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT------CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH------hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 45777889999999999999975 69999999997543 235799999999999999999999999999999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC-cEEEeecccccccCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHR 458 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~kl~Dfgla~~~~~~ 458 (623)
+++|+|.++++.. ..+++..+..++.|++.||+|||++ +||||||||+|||++.++ .+||+|||+|+.+...
T Consensus 132 ~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 132 LEGGSLGQLIKQM----GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred cCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 9999999999864 4699999999999999999999999 999999999999999987 6999999999977543
Q ss_pred CCc----eeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 459 DSH----VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 459 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
... .....+||+.|||||++.+..++.++|||||||++|||+||+.||...... .... .+.......
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~---~~~~----~i~~~~~~~-- 275 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG---PLCL----KIASEPPPI-- 275 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS---CCHH----HHHHSCCGG--
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH---HHHH----HHHcCCCCc--
Confidence 221 123457999999999999999999999999999999999999999643221 1111 111111100
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
. .++...+.++.+++.+||..||++|||+.|++++|..
T Consensus 276 --~----~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 276 --R----EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp --G----GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --h----hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 0 1122334678999999999999999999999998865
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=6.3e-51 Score=409.40 Aligned_cols=246 Identities=26% Similarity=0.396 Sum_probs=198.1
Q ss_pred CcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-chHHHHHHHHHHhhcCCCceeeeeeeeec----CCceEEEE
Q 006968 304 SAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCST----ENERLLVY 377 (623)
Q Consensus 304 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv~ 377 (623)
...+.||+|+||+||+|.+. ++..||||++....... ....|.+|++++++++|||||++++++.+ ++..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999975 58999999997654332 34569999999999999999999999864 34579999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeEECC-CCcEEEeecccccc
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK--IIHRDVKAANILLDE-DFEAVVGDFGLAKL 454 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlk~~NIll~~-~~~~kl~Dfgla~~ 454 (623)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ + |+||||||+|||++. ++.+||+|||+|+.
T Consensus 109 Ey~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp ECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred eCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 999999999999864 4699999999999999999999998 6 999999999999984 78999999999986
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
... ......+||+.|||||++.+ .++.++|||||||++|||+||+.||..... .......+. .+.....
T Consensus 182 ~~~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~------~~~~~~~i~-~~~~~~~ 250 (290)
T 3fpq_A 182 KRA---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN------AAQIYRRVT-SGVKPAS 250 (290)
T ss_dssp CCT---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS------HHHHHHHHT-TTCCCGG
T ss_pred CCC---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc------HHHHHHHHH-cCCCCCC
Confidence 432 23445679999999998865 699999999999999999999999963221 111122221 1111111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.+ ...+.++.+++.+||..||++|||+.|+++|
T Consensus 251 ~~--------~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 251 FD--------KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GG--------GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CC--------ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11 1122568899999999999999999999875
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=6.7e-52 Score=418.47 Aligned_cols=249 Identities=23% Similarity=0.313 Sum_probs=209.4
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc--ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
++|++.+.||+|+||+||+|... +|+.||||++++... ......+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46999999999999999999975 699999999975432 233457899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~~----~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 999999999999864 4699999999999999999999999 999999999999999999999999999998754
Q ss_pred CC-CceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 458 RD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 458 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
.. .......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+....+.. +..
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~~~~~i~~-~~~----- 251 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-------GLIFAKIIK-LEY----- 251 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH-TCC-----
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHc-CCC-----
Confidence 33 2344567899999999999999999999999999999999999999964322 111222211 111
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLK 574 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 574 (623)
. ++...+.++.+++.+||..||++|||+.|++.
T Consensus 252 -~----~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 252 -D----FPEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp -C----CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred -C----CCcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 1 12223467899999999999999999998754
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.7e-50 Score=422.91 Aligned_cols=250 Identities=22% Similarity=0.299 Sum_probs=209.1
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
+.|+..+.||+|+||.||+|... +|+.||||+++... ......+.+|+.+|+.++|||||++++++.+++..||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT-CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 56889999999999999999975 69999999997544 33455789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 459 (623)
|++|+|.+++... .+++..+..++.|++.||+|||++ +||||||||+|||++.++.+||+|||+|+.+....
T Consensus 230 ~~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 230 LEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp CTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred CCCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 9999999998752 589999999999999999999999 99999999999999999999999999998775433
Q ss_pred CceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccccc
Q 006968 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539 (623)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (623)
. .....+||+.|||||++.+..|+.++|||||||++|||++|+.||..... .+.+..+..... +.+
T Consensus 302 ~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~~~~~i~~~~~------~~~ 367 (423)
T 4fie_A 302 P-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LKAMKMIRDNLP------PRL 367 (423)
T ss_dssp C-CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSCC------CCC
T ss_pred c-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHcCCC------CCC
Confidence 2 34456799999999999999999999999999999999999999964322 111222211110 111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
. .....+.++.+++.+||..||++|||+.|++++
T Consensus 368 ~--~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 368 K--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp S--CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred c--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 111224678999999999999999999999875
No 13
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.8e-50 Score=417.39 Aligned_cols=319 Identities=70% Similarity=1.127 Sum_probs=266.9
Q ss_pred cCCCCCCccccCcccccCHHHHHHHhcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhh
Q 006968 275 VNDQYDPEVSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL 354 (623)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~ 354 (623)
.....++....+....+++.++....++|.+.+.||+|+||.||+|...+|+.||||+++..........+.+|+++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~ 83 (326)
T 3uim_A 4 VPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISM 83 (326)
T ss_dssp -----------CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGT
T ss_pred CCcccCcccccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHh
Confidence 34445566667778899999999999999999999999999999999888999999999876555555579999999999
Q ss_pred cCCCceeeeeeeeecCCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCC
Q 006968 355 AVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAA 434 (623)
Q Consensus 355 l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~ 434 (623)
++||||+++++++...+..++||||+++|+|.+++.........+++..+..++.|++.||+|||+.+.++|+||||||+
T Consensus 84 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~ 163 (326)
T 3uim_A 84 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAA 163 (326)
T ss_dssp CCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGG
T ss_pred ccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchh
Confidence 99999999999999999999999999999999999887666667999999999999999999999988889999999999
Q ss_pred CeEECCCCcEEEeecccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCccccc-c
Q 006968 435 NILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAA-N 513 (623)
Q Consensus 435 NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~-~ 513 (623)
||+++.++.+||+|||+++..............||+.|+|||.+.+..++.++||||||+++|||++|+.||+..... .
T Consensus 164 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 243 (326)
T 3uim_A 164 NILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND 243 (326)
T ss_dssp GEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTT
T ss_pred hEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccc
Confidence 999999999999999999987655555556667999999999998889999999999999999999999999743322 2
Q ss_pred cccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCCCccchhhhccCC
Q 006968 514 QRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLAEKWEASQKIET 593 (623)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~~~~~~~ 593 (623)
......+|+.............+......+....+..+.+++.+||+.||++|||+.||+++|++..+.+.|......+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~~~ 323 (326)
T 3uim_A 244 DDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKEEM 323 (326)
T ss_dssp SCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSCC-------
T ss_pred cchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhhhhhhHHHh
Confidence 33445577777777777788888888888889999999999999999999999999999999999999888877654443
No 14
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.4e-50 Score=403.25 Aligned_cols=247 Identities=22% Similarity=0.371 Sum_probs=192.7
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc--cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA--GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.+|++.+.||+|+||+||+|... +|+.||||++++.... .....+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 57999999999999999999874 6999999999765432 23457999999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+ +|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~~----~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHHS----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 68999998763 4699999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCceeeccccccccccccccccCCC-CCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
.. .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||..... ....+.... +..
T Consensus 165 ~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-------~~~~~~i~~-~~~----- 229 (275)
T 3hyh_A 165 GN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-------PVLFKNISN-GVY----- 229 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH-TCC-----
T ss_pred CC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHc-CCC-----
Confidence 32 2345679999999999988776 5899999999999999999999964221 122222221 111
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
. ++...+.++.+++.+||+.||++|||+.|++++
T Consensus 230 -~----~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 230 -T----LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -C----CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred -C----CCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1 122234678999999999999999999999885
No 15
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=5.9e-51 Score=411.59 Aligned_cols=249 Identities=26% Similarity=0.328 Sum_probs=199.2
Q ss_pred cCCCcCCceeccCCeEEEEEEeC----CCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 375 (623)
++|++.+.||+|+||+||+|... +++.||||++++.... .....+.+|++++++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56999999999999999999852 4789999999764432 234468899999999999999999999999999999
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 99999999999999864 4699999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccc
Q 006968 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMV 535 (623)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (623)
.... ......+||+.|||||++.+..++.++||||+||++|||+||+.||..... .+.+..+.. +..
T Consensus 177 ~~~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-------~~~~~~i~~-~~~---- 243 (304)
T 3ubd_A 177 IDHE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-------KETMTMILK-AKL---- 243 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH-CCC----
T ss_pred cCCC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-------HHHHHHHHc-CCC----
Confidence 4332 223456799999999999999999999999999999999999999974322 112222221 111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 006968 536 DKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKM-----SEVLKM 575 (623)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~-----~evl~~ 575 (623)
.++...+.++.+++.+||+.||++|||+ +|+++|
T Consensus 244 ------~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 244 ------GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred ------CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 1122234678999999999999999984 677664
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=4.5e-49 Score=399.37 Aligned_cols=252 Identities=22% Similarity=0.327 Sum_probs=190.9
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCC--------
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN-------- 371 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-------- 371 (623)
++|++.+.||+|+||+||+|... +|+.||||+++..........+.+|++++++++|||||++++++...+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45889999999999999999975 699999999976554444567999999999999999999999986543
Q ss_pred ----ceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEe
Q 006968 372 ----ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVG 447 (623)
Q Consensus 372 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~ 447 (623)
..++||||+++|+|.+++.... .....++..++.++.|+++||+|||++ +|+||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 3689999999999999997642 123467788899999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCc-----------eeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCccccccccc
Q 006968 448 DFGLAKLLDHRDSH-----------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRG 516 (623)
Q Consensus 448 Dfgla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~ 516 (623)
|||+|+.+...... .....+||+.|||||++.+..|+.++|||||||++|||++ ||.....
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~----- 232 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME----- 232 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH-----
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH-----
Confidence 99999877543221 1234569999999999999999999999999999999996 6642110
Q ss_pred chHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 517 VMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
....+.... ....... .........+++.+||+.||++|||+.|++++
T Consensus 233 -~~~~~~~~~-~~~~p~~---------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 233 -RVRTLTDVR-NLKFPPL---------FTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp -HHHHHHHHH-TTCCCHH---------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HHHHHHHHh-cCCCCCC---------CcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 011111111 1111100 11223456789999999999999999999874
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.2e-46 Score=391.93 Aligned_cols=262 Identities=19% Similarity=0.283 Sum_probs=201.1
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeec------CCc
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCST------ENE 372 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~ 372 (623)
++|++.+.||+|+||+||+|... +|+.||||+++..... .....+.+|+++|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 56899999999999999999975 6999999999754432 234568899999999999999999998753 367
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccc
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla 452 (623)
.|+||||++ |+|.+++.. ...+++..+..++.|++.||+|||++ +||||||||+|||++.++.+||+|||+|
T Consensus 134 ~~ivmE~~~-g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp EEEEEECCS-EEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeCCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 899999995 678888865 35799999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC---CceeeccccccccccccccccC-CCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhc
Q 006968 453 KLLDHRD---SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQE 528 (623)
Q Consensus 453 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 528 (623)
+.+.... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||......+.. ..+... .
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l----~~I~~~--~ 279 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL----QLIMMV--L 279 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHH----HHHHHH--H
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHH----HHHHHh--c
Confidence 8764322 2233456799999999998775 5699999999999999999999999743321111 101000 0
Q ss_pred Ccccc-ccc-----------cccCC--CCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 529 GKLSQ-MVD-----------KDLKG--NFD-----RIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 529 ~~~~~-~~~-----------~~~~~--~~~-----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
+.... ... ..+.. ..+ .....++.+++.+||..||++|||+.|+++|=
T Consensus 280 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 346 (398)
T 4b99_A 280 GTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP 346 (398)
T ss_dssp CCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSG
T ss_pred CCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCH
Confidence 10000 000 00000 000 01235788999999999999999999998863
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=7.9e-46 Score=381.90 Aligned_cols=282 Identities=39% Similarity=0.682 Sum_probs=240.9
Q ss_pred CHHHHHHHhcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCC
Q 006968 292 TFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN 371 (623)
Q Consensus 292 ~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 371 (623)
++.++...+++|...+.||+|+||.||+|...+|+.||||++.... ......+.+|+.+++.++||||+++++++...+
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 3344455678999999999999999999998889999999986543 334567999999999999999999999999999
Q ss_pred ceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccc
Q 006968 372 ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGL 451 (623)
Q Consensus 372 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgl 451 (623)
..++||||+++|+|.+++.........+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999999999999999976544445699999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCC-CceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCc
Q 006968 452 AKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530 (623)
Q Consensus 452 a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (623)
++...... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .......|.......+.
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-EMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS-SCCCHHHHTHHHHTTTC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH-HHHHHHHHhhhcccccc
Confidence 98654322 22233445899999999999899999999999999999999999999754332 22334466666666667
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 531 LSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
+...+++..........+..+.+++.+||+.||++|||+.|++++|+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 312 (321)
T 2qkw_B 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312 (321)
T ss_dssp CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 777778777777888899999999999999999999999999999986
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6.8e-46 Score=386.20 Aligned_cols=198 Identities=23% Similarity=0.385 Sum_probs=170.4
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeC----CCcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCce
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENER 373 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~ 373 (623)
..++|++.+.||+|+||+||+|..+ +++.||||++.... ...++.+|++++..+ .||||+++++++.+.+..
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 4578999999999999999999753 47889999986532 345688999999988 699999999999999999
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC-CcEEEeecccc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED-FEAVVGDFGLA 452 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~kl~Dfgla 452 (623)
++||||+++|+|.+++. .+++..++.++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|
T Consensus 96 ~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp EEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 99999999999999884 388999999999999999999999 99999999999999876 79999999999
Q ss_pred cccCCCCC---------------------------ceeeccccccccccccccccC-CCCCccchhhHHHHHHHHHhCCC
Q 006968 453 KLLDHRDS---------------------------HVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQR 504 (623)
Q Consensus 453 ~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvil~elltg~~ 504 (623)
+....... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 86543211 112345699999999999775 58999999999999999999999
Q ss_pred CCCcc
Q 006968 505 ALDFG 509 (623)
Q Consensus 505 p~~~~ 509 (623)
||..+
T Consensus 246 Pf~~~ 250 (361)
T 4f9c_A 246 PFYKA 250 (361)
T ss_dssp SSSCC
T ss_pred CCCCC
Confidence 99643
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.7e-45 Score=400.65 Aligned_cols=252 Identities=25% Similarity=0.290 Sum_probs=202.6
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc--cchHHHHHH---HHHHhhcCCCceeeeeeeeecCCceE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA--GGEVQFQTE---VETISLAVHRNLLRLCGFCSTENERL 374 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e---~~~l~~l~H~niv~l~~~~~~~~~~~ 374 (623)
++|++.++||+|+||.||+|... +|+.||||++++.... .....+.+| +.+++.++|||||++++++.+++..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 56899999999999999999975 6999999999754321 222233444 56667789999999999999999999
Q ss_pred EEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccc
Q 006968 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (623)
Q Consensus 375 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~ 454 (623)
+||||++||+|.++|... ..+++..++.++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.
T Consensus 269 lVmEy~~GGdL~~~l~~~----~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQH----GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEECCCCSCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 999999999999999864 4699999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 455 LDHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
+.... ....+||+.|||||++.. ..|+.++||||+||++|||++|+.||....... .....+.... ..
T Consensus 342 ~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~----~~~i~~~i~~-~~--- 410 (689)
T 3v5w_A 342 FSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD----KHEIDRMTLT-MA--- 410 (689)
T ss_dssp CSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC----HHHHHHHHHH-CC---
T ss_pred cCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHhhcC-CC---
Confidence 65432 345679999999999965 579999999999999999999999996432211 1111111111 11
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHhh
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPK-----MSEVLKMLE 577 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-----~~evl~~L~ 577 (623)
..++...+.++.+++.+||..||++|++ +.||++|-.
T Consensus 411 -------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hpf 452 (689)
T 3v5w_A 411 -------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 452 (689)
T ss_dssp -------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGG
T ss_pred -------CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCcc
Confidence 1122223467899999999999999998 788877543
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.9e-44 Score=397.54 Aligned_cols=252 Identities=21% Similarity=0.308 Sum_probs=208.2
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
++|++.+.||+|+||.||+|... +|+.||+|+++... ......+.+|+++|+.++|||||++++++.+.+..++||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 57999999999999999999975 69999999997543 23345689999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC--CcEEEeecccccccCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED--FEAVVGDFGLAKLLDH 457 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~--~~~kl~Dfgla~~~~~ 457 (623)
+++|+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 236 ~~gg~L~~~i~~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 236 MSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp CCCCBHHHHHTCT---TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred cCCCcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 9999999998643 34699999999999999999999999 99999999999999854 8999999999998764
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
.. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +.+..+... .. .+..
T Consensus 310 ~~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-------~~~~~i~~~-~~--~~~~ 377 (573)
T 3uto_A 310 KQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-------ETLRNVKSC-DW--NMDD 377 (573)
T ss_dssp TS--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-------HHHHHHHTT-CC--CCCS
T ss_pred CC--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-------HHHHHHHhC-CC--CCCc
Confidence 32 344567999999999999999999999999999999999999999743221 112222111 10 0011
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
... ...+.++.+++.+||..||++|||+.|+++|
T Consensus 378 ~~~----~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 378 SAF----SGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp GGG----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccc----cCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111 1123678899999999999999999999986
No 22
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.6e-42 Score=354.66 Aligned_cols=283 Identities=39% Similarity=0.659 Sum_probs=231.6
Q ss_pred cccccCHHHHHHHhcCCCcC------CceeccCCeEEEEEEeCCCcEEEEEEeccccc---ccchHHHHHHHHHHhhcCC
Q 006968 287 HLKRYTFKELRAATSNFSAK------NILGRGGFGIVYKGCFSDGALVAVKRLKDYNI---AGGEVQFQTEVETISLAVH 357 (623)
Q Consensus 287 ~~~~~~~~~l~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~H 357 (623)
....+++.++..++.+|... +.||+|+||.||+|.. +++.||||++..... ......+.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 45678999999999999887 8999999999999987 688999999875432 2234578999999999999
Q ss_pred CceeeeeeeeecCCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeE
Q 006968 358 RNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANIL 437 (623)
Q Consensus 358 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIl 437 (623)
|||+++++++...+..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 999999999999999999999999999999997542 245699999999999999999999999 9999999999999
Q ss_pred ECCCCcEEEeecccccccCCCCCc-eeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCccccccccc
Q 006968 438 LDEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRG 516 (623)
Q Consensus 438 l~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~ 516 (623)
++.++.+||+|||++......... ......||+.|+|||.+.+ .++.++||||||+++|+|++|+.||.......
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--- 241 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ--- 241 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS---
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH---
Confidence 999999999999999876543322 2334569999999998865 58899999999999999999999997543321
Q ss_pred chHHHHHHHhhc-CccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 517 VMLDWVKKLHQE-GKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 517 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
....+....... ..+...+++.+. ..+...+..+.+++.+||+.+|++|||+.+++++|++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l 304 (307)
T 2nru_A 242 LLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304 (307)
T ss_dssp BTTHHHHHHHTTSCCHHHHSCSSCS-CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhhhhhcccccc-ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 222333332222 223344444432 35677788999999999999999999999999999873
No 23
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.4e-43 Score=372.26 Aligned_cols=258 Identities=28% Similarity=0.402 Sum_probs=211.3
Q ss_pred cCCCcCCceeccCCeEEEEEEe--------CCCcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeeeeeeeecCC
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF--------SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTEN 371 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 371 (623)
++|.+.+.||+|+||.||+|.. .++..||||+++..........+.+|+.+++.+ +||||+++++++...+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 6788899999999999999985 245689999997665444456799999999999 8999999999999999
Q ss_pred ceEEEEecccCCChhhhhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC
Q 006968 372 ERLLVYPYMPNGSVASRLRDHIH------------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD 439 (623)
Q Consensus 372 ~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~ 439 (623)
..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+|||++
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~ 237 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT 237 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEEC
Confidence 99999999999999999986432 123589999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCc-eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccc
Q 006968 440 EDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGV 517 (623)
Q Consensus 440 ~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~ 517 (623)
.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~----~ 313 (370)
T 2psq_A 238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----E 313 (370)
T ss_dssp TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----G
T ss_pred CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH----H
Confidence 9999999999999876543322 2233457889999999999999999999999999999999 99998643221 1
Q ss_pred hHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 518 MLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.. ... ..+. ....+...+.++.+++.+||+.||++|||+.|+++.|+.
T Consensus 314 ~~---~~~-~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~ 361 (370)
T 2psq_A 314 LF---KLL-KEGH---------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361 (370)
T ss_dssp HH---HHH-HTTC---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HH---HHH-hcCC---------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11 111 1111 111222334679999999999999999999999999986
No 24
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.3e-42 Score=353.85 Aligned_cols=251 Identities=20% Similarity=0.305 Sum_probs=208.3
Q ss_pred hcCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
..+|.+.+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc-ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 35799999999999999999986 468999999997544 3345678999999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 98 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 98 YLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp CCTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred CCCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 99999999999753 589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccccc
Q 006968 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKD 538 (623)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (623)
.. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .........+....
T Consensus 170 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~~~~~~~~~----- 236 (297)
T 3fxz_A 170 QS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYLIATNGTPEL----- 236 (297)
T ss_dssp TC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHHCSCCC-----
T ss_pred cc-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCCCCC-----
Confidence 33 233456999999999999999999999999999999999999999643221 11111111111110
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 539 LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
..+...+..+.+++.+||+.||++|||+.|++++
T Consensus 237 ---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 237 ---QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp ---SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---CCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1122234678999999999999999999999875
No 25
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.8e-44 Score=369.84 Aligned_cols=252 Identities=23% Similarity=0.370 Sum_probs=200.5
Q ss_pred hcCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
.++|.+.+.||+|+||.||+|.. .+|+.||||++...........+.+|+++++.++||||+++++++...+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 46789999999999999999986 47999999999776554455678999999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 89 ~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 161 (347)
T 3zgw_A 89 YCPGGELFDYIISQ----DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161 (347)
T ss_dssp CCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred CCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence 99999999999764 3599999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCceeeccccccccccccccccCCC-CCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 459 DSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
.........||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... ......... +..
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-------~~~~~~i~~-~~~------ 227 (347)
T 3zgw_A 162 KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV-------MALYKKIMR-GKY------ 227 (347)
T ss_dssp ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH-TCC------
T ss_pred CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHc-CCC------
Confidence 4334455679999999999988775 8999999999999999999999974321 111222211 111
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.++...+.++.+++.+||..||++|||+.|++++-
T Consensus 228 ----~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 228 ----DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred ----CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 11122236688999999999999999999999854
No 26
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3e-43 Score=360.70 Aligned_cols=254 Identities=27% Similarity=0.450 Sum_probs=208.0
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
++|.+.+.||+|+||.||+|... +++.||+|++.... ......|.+|++++++++||||+++++++..++..++||||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 56888999999999999999975 68999999985432 33456799999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 459 (623)
+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 89 IKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp CTTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 9999999999864 34699999999999999999999999 99999999999999999999999999998765432
Q ss_pred Cce-------------eeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccc-c-chHHHHHH
Q 006968 460 SHV-------------TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQR-G-VMLDWVKK 524 (623)
Q Consensus 460 ~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~-~-~~~~~~~~ 524 (623)
... .....||+.|+|||++.+..++.++||||||+++|||++|..|+......... . ......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~-- 240 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL-- 240 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH--
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc--
Confidence 211 11456999999999999999999999999999999999999998643221111 0 011111
Q ss_pred HhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
+... +...+.++.+++.+||+.||++|||+.++++.|+.
T Consensus 241 -----------~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~ 279 (310)
T 3s95_A 241 -----------DRYC----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLET 279 (310)
T ss_dssp -----------HHTC----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -----------cccC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1111 11223568899999999999999999999999986
No 27
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=365.03 Aligned_cols=255 Identities=26% Similarity=0.395 Sum_probs=208.3
Q ss_pred cCCCcCCceeccCCeEEEEEEeC----CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 376 (623)
.+|.+.+.||+|+||.||+|.+. .+..||||+++..........|.+|+.+++.++||||+++++++...+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 56788899999999999999974 35569999998655445566799999999999999999999999999999999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccC
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~ 456 (623)
|||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 129 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 129 TEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred eeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 9999999999999753 34699999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc--eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 457 HRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 457 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
..... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... +.........
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-------~~~~~~~~~~---- 271 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-------DVISSVEEGY---- 271 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-------HHHHHHHTTC----
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-------HHHHHHHcCC----
Confidence 43322 2223346788999999998999999999999999999999 99998643221 1112211111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....+...+.++.+++.+||..||++|||+.+|++.|+.
T Consensus 272 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~ 310 (325)
T 3kul_A 272 ------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310 (325)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ------CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111122334779999999999999999999999999987
No 28
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.3e-43 Score=352.46 Aligned_cols=256 Identities=27% Similarity=0.434 Sum_probs=213.3
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
.++|.+.+.||+|+||.||+|...++..||||+++.... ...++.+|++++.+++||||+++++++...+..++||||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM--SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC--cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 357888999999999999999998888999999976432 346789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 459 (623)
+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 85 ISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp CTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred cCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 9999999999764 23589999999999999999999999 99999999999999999999999999998766544
Q ss_pred CceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCccccccccc
Q 006968 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKD 538 (623)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (623)
........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... ........... .
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~~---~---- 224 (268)
T 3sxs_A 159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-------EVVLKVSQGHR---L---- 224 (268)
T ss_dssp EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-------HHHHHHHTTCC---C----
T ss_pred hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-------HHHHHHHcCCC---C----
Confidence 433444557788999999998899999999999999999999 99998643221 11111111110 0
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCC
Q 006968 539 LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDG 580 (623)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~ 580 (623)
..+...+..+.+++.+||+.||++|||+.+++++|+...
T Consensus 225 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 225 ---YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp ---CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred ---CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 011122367899999999999999999999999998843
No 29
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2e-43 Score=354.37 Aligned_cols=253 Identities=26% Similarity=0.428 Sum_probs=210.9
Q ss_pred cCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEecc
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYM 380 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 380 (623)
++|.+.+.||+|+||.||+|...+++.||+|+++... ....++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc--cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 5688889999999999999999889999999997643 23567999999999999999999999999999999999999
Q ss_pred cCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCCC
Q 006968 381 PNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDS 460 (623)
Q Consensus 381 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 460 (623)
++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 88 ~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 88 EHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp TTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 999999999753 34689999999999999999999999 999999999999999999999999999987654332
Q ss_pred ceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCcccccccccc
Q 006968 461 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539 (623)
Q Consensus 461 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (623)
.......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... +.........
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-------~~~~~~~~~~---------- 224 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-------EVVEDISTGF---------- 224 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHTTC----------
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-------HHHHHHhcCc----------
Confidence 23334457788999999998999999999999999999999 99998643221 1112211110
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....+...+.++.+++.+||+.||++|||+.+++++|++
T Consensus 225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 263 (269)
T 4hcu_A 225 RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 263 (269)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence 111122234678999999999999999999999999986
No 30
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.8e-42 Score=353.56 Aligned_cols=263 Identities=21% Similarity=0.282 Sum_probs=214.6
Q ss_pred cccCHHHHHHHhcC----------CCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCC
Q 006968 289 KRYTFKELRAATSN----------FSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVH 357 (623)
Q Consensus 289 ~~~~~~~l~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H 357 (623)
..+++++++.+++. |...+.||+|+||.||+|... +|+.||||+++... ......+.+|+.+++.++|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCC
Confidence 45778888887765 666778999999999999976 79999999997543 3345678999999999999
Q ss_pred CceeeeeeeeecCCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeE
Q 006968 358 RNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANIL 437 (623)
Q Consensus 358 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIl 437 (623)
|||+++++++...+..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 173 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSIL 173 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence 9999999999999999999999999999998864 3589999999999999999999999 9999999999999
Q ss_pred ECCCCcEEEeecccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccc
Q 006968 438 LDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGV 517 (623)
Q Consensus 438 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~ 517 (623)
++.++.+||+|||++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~------ 246 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP------ 246 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------
T ss_pred ECCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------
Confidence 99999999999999987654322 23445699999999999999999999999999999999999999964322
Q ss_pred hHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 518 MLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
........... ... +. .....+.++.+++.+||..||++|||+.|++++-
T Consensus 247 -~~~~~~~~~~~-~~~-----~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp 296 (321)
T 2c30_A 247 -VQAMKRLRDSP-PPK-----LK--NSHKVSPVLRDFLERMLVRDPQERATAQELLDHP 296 (321)
T ss_dssp -HHHHHHHHHSS-CCC-----CT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred -HHHHHHHhcCC-CCC-----cC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 11112211111 000 00 0112236789999999999999999999999853
No 31
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=9.2e-44 Score=374.72 Aligned_cols=256 Identities=25% Similarity=0.395 Sum_probs=209.5
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
.++|.+.+.||+|+||.||+|.+. +++.||||.++.........+|.+|++++++++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 357888899999999999999986 7899999999765433344578999999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++|+|.++++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 193 LVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp CCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred cCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 99999999999864 23589999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCcee-eccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 459 DSHVT-TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 459 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
..... ....+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... . +......+.
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-------~-~~~~~~~~~------ 332 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-------Q-TREFVEKGG------ 332 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-------H-HHHHHHTTC------
T ss_pred ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------H-HHHHHHcCC------
Confidence 21111 11235778999999998899999999999999999998 99998643211 1 111111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....+...+.++.+++.+||+.||++|||+.++++.|++
T Consensus 333 ---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 371 (377)
T 3cbl_A 333 ---RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS 371 (377)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 111222334678999999999999999999999999986
No 32
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5e-42 Score=353.14 Aligned_cols=271 Identities=17% Similarity=0.227 Sum_probs=216.5
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCC--ceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN--ERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv~ 377 (623)
.+|.+.+.||+|+||.||+|... +|+.||||+++..........+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56888999999999999999976 489999999986655555677899999999999999999999987655 779999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE----CCCCcEEEeeccccc
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL----DEDFEAVVGDFGLAK 453 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~kl~Dfgla~ 453 (623)
||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 89 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp ECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred eCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999986432 23499999999999999999999999 99999999999999 788889999999998
Q ss_pred ccCCCCCceeeccccccccccccccc--------cCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHH
Q 006968 454 LLDHRDSHVTTAVRGTVGHIAPEYLS--------TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKL 525 (623)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 525 (623)
....... .....||+.|+|||++. +..++.++||||||+++|||++|+.||......... ...+...
T Consensus 165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~~~~~~~ 239 (319)
T 4euu_A 165 ELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN---KEVMYKI 239 (319)
T ss_dssp ECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC---HHHHHHH
T ss_pred ecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh---HHHHHHH
Confidence 7654332 23456999999999986 577899999999999999999999999643322221 1122222
Q ss_pred hhcC---ccccc---------ccc--ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCC
Q 006968 526 HQEG---KLSQM---------VDK--DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDG 580 (623)
Q Consensus 526 ~~~~---~~~~~---------~~~--~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~ 580 (623)
.... ..... +.. .....+.......+.+++.+||+.||++|||+.|++++..+..
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred hcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 1111 11100 000 1122446778889999999999999999999999999998743
No 33
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5.7e-43 Score=358.42 Aligned_cols=258 Identities=29% Similarity=0.432 Sum_probs=202.0
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEeccccccc-chHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
...+|.+.+.||+|+||.||+|.. +|+.||||++....... ....+.+|++++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 346788899999999999999987 68899999997654332 2346899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK--IIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
||+++|+|.+++.... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 114 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp ECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred ecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 9999999999997531 112489999999999999999999999 8 999999999999999999999999999864
Q ss_pred CCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccc
Q 006968 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMV 535 (623)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (623)
.... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... +..........
T Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-------~~~~~~~~~~~----- 256 (309)
T 3p86_A 190 ASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-------QVVAAVGFKCK----- 256 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-------HHHHHHHHSCC-----
T ss_pred cccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhcCC-----
Confidence 4322 2233456999999999999999999999999999999999999999643221 11111111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 536 DKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....+...+.++.+++.+||+.||++|||+.++++.|+.
T Consensus 257 ----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~ 295 (309)
T 3p86_A 257 ----RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRP 295 (309)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ----CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 011222334678999999999999999999999999976
No 34
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.3e-43 Score=370.90 Aligned_cols=256 Identities=28% Similarity=0.418 Sum_probs=199.1
Q ss_pred cCCCcCCceeccCCeEEEEEEeC----CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 376 (623)
.+|.+.+.||+|+||.||+|... ++..||||+++.........+|.+|+.++++++||||+++++++...+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57889999999999999999874 57789999997654444556799999999999999999999999999999999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccC
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~ 456 (623)
|||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 125 ~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 125 TEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 9999999999999753 34699999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCce--eeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 457 HRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 457 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
...... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .+...... .+
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-------~~~~~~i~-~~---- 266 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-------QDVIKAVD-EG---- 266 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-------HHHHHHHH-TT----
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHH-cC----
Confidence 432221 122235778999999999999999999999999999998 9999863321 11111111 11
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
.....+...+.++.+++.+||+.||++||++.+|++.|+..
T Consensus 267 -----~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 267 -----YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp -----EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 01111223347799999999999999999999999999874
No 35
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6.5e-43 Score=360.71 Aligned_cols=250 Identities=22% Similarity=0.358 Sum_probs=207.6
Q ss_pred hcCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
..+|.+.+.||+|+||.||+|.. .+|+.||||++...... .....+.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35788999999999999999997 47999999999765432 23456889999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH----GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 999999999999764 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeccccccccccccccccCCCC-CccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSS-EKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
.. .....+||+.|+|||++.+..++ .++||||+||++|||++|+.||..... ......... +..
T Consensus 167 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~i~~-~~~----- 231 (328)
T 3fe3_A 167 GG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-------KELRERVLR-GKY----- 231 (328)
T ss_dssp SC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH-CCC-----
T ss_pred CC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHh-CCC-----
Confidence 32 23455799999999999887765 799999999999999999999974321 111111111 111
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
..+...+.++.+++.+||..||.+|||+.|++++-
T Consensus 232 -----~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~ 266 (328)
T 3fe3_A 232 -----RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDR 266 (328)
T ss_dssp -----CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCT
T ss_pred -----CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCH
Confidence 11122346788999999999999999999998863
No 36
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.6e-43 Score=368.83 Aligned_cols=269 Identities=26% Similarity=0.374 Sum_probs=214.4
Q ss_pred cCHHHHHHHhcCCCcCCceeccCCeEEEEEEe------CCCcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeee
Q 006968 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCF------SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRL 363 (623)
Q Consensus 291 ~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l 363 (623)
+...++....++|.+.+.||+|+||.||+|.+ .+++.||||+++..........+.+|++++.++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34445555678899999999999999999973 246899999998655444556799999999999 78999999
Q ss_pred eeeeecCCc-eEEEEecccCCChhhhhhhccCC-----------------------------------------------
Q 006968 364 CGFCSTENE-RLLVYPYMPNGSVASRLRDHIHG----------------------------------------------- 395 (623)
Q Consensus 364 ~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~----------------------------------------------- 395 (623)
++++...+. .++||||+++|+|.+++......
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987554 89999999999999999764321
Q ss_pred ---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCCC
Q 006968 396 ---------------RPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDS 460 (623)
Q Consensus 396 ---------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 460 (623)
...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 12289999999999999999999999 999999999999999999999999999986644322
Q ss_pred -ceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCccccccccc
Q 006968 461 -HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKD 538 (623)
Q Consensus 461 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (623)
.......||+.|+|||++.+..++.++||||||+++|||+| |+.||....... ....... .+..
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~-~~~~------- 314 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLK-EGTR------- 314 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHH-HTCC-------
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH------HHHHHHH-cCCC-------
Confidence 23344568999999999999999999999999999999998 999986432211 1111111 1110
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 539 LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
...+...+.++.+++.+||+.||++|||+.|++++|+.
T Consensus 315 --~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 352 (359)
T 3vhe_A 315 --MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 352 (359)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 11122234678999999999999999999999999986
No 37
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2e-43 Score=370.68 Aligned_cols=258 Identities=28% Similarity=0.364 Sum_probs=210.0
Q ss_pred cCCCcCCceeccCCeEEEEEEeC------CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERL 374 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 374 (623)
++|.+.+.||+|+||.||+|.+. ++..||||+++..........+.+|+.++++++||||+++++++...+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56888999999999999999853 467899999976555555667999999999999999999999999999999
Q ss_pred EEEecccCCChhhhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC---cEEEee
Q 006968 375 LVYPYMPNGSVASRLRDHIH---GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF---EAVVGD 448 (623)
Q Consensus 375 lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~kl~D 448 (623)
+||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECC
Confidence 99999999999999987532 234699999999999999999999999 999999999999999555 599999
Q ss_pred cccccccCCC-CCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHh
Q 006968 449 FGLAKLLDHR-DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLH 526 (623)
Q Consensus 449 fgla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 526 (623)
||+++..... .........||+.|+|||.+.+..++.++|||||||++|||++ |+.||..... .+......
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~-------~~~~~~i~ 300 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-------QEVLEFVT 300 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHHHH
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHH
Confidence 9999754322 1122334558999999999999999999999999999999998 9999864322 11122221
Q ss_pred hcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.... ...+...+..+.+++.+||+.||++|||+.+|+++|+.
T Consensus 301 ~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 301 SGGR----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp TTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cCCC----------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 1111 11122234678999999999999999999999999987
No 38
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4e-43 Score=361.83 Aligned_cols=267 Identities=25% Similarity=0.334 Sum_probs=206.9
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCC----ceEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN----ERLL 375 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~l 375 (623)
..+|++.+.||+|+||.||+|... ++.||||+++... .....+..|+.++++++||||+++++++.... ..++
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 467889999999999999999874 8999999996542 22345677899999999999999999997754 3699
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-------CCCCeEecCCCCCCeEECCCCcEEEee
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ-------CDPKIIHRDVKAANILLDEDFEAVVGD 448 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-------~~~~ivH~Dlk~~NIll~~~~~~kl~D 448 (623)
||||+++|+|.++++.. .+++..+..++.|++.||+|||+. +.++|+||||||+|||++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999999763 499999999999999999999986 244899999999999999999999999
Q ss_pred cccccccCCCCCc-eeecccccccccccccccc-----CCCCCccchhhHHHHHHHHHhCCCCCCccccccccc------
Q 006968 449 FGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRG------ 516 (623)
Q Consensus 449 fgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~------ 516 (623)
||+++........ ......||+.|+|||++.+ ..++.++||||||+++|||+||+.||..........
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9999876543322 2334569999999999976 345678999999999999999999997533221111
Q ss_pred ---chHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 517 ---VMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 517 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
...++..... .......+..... ....+.++.+++.+||+.||++|||+.||++.|+.
T Consensus 255 ~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 315 (322)
T 3soc_A 255 QHPSLEDMQEVVV-HKKKRPVLRDYWQ---KHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315 (322)
T ss_dssp SSCCHHHHHHHHT-TSCCCCCCCGGGG---SSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cCCchhhhhhhhh-cccCCCCcccccc---ccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 0111111111 1111111111111 22456779999999999999999999999999986
No 39
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=7.3e-43 Score=352.91 Aligned_cols=254 Identities=22% Similarity=0.375 Sum_probs=208.1
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
.++|.+.+.||+|+||.||+|.+.++..||||+++.... ...++.+|++++.+++||||+++++++...+..++||||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC--CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 467888999999999999999998888999999976432 356799999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 459 (623)
+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 101 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 101 MANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp CTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred cCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 9999999999763 23599999999999999999999999 99999999999999999999999999998765433
Q ss_pred CceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCccccccccc
Q 006968 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKD 538 (623)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (623)
........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... +.........
T Consensus 175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-------~~~~~~~~~~--------- 238 (283)
T 3gen_A 175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-------ETAEHIAQGL--------- 238 (283)
T ss_dssp HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-------HHHHHHHTTC---------
T ss_pred cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-------HHHHHHhccc---------
Confidence 222333447788999999998899999999999999999998 99998643221 1111111110
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 539 LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....+...+..+.+++.+||+.+|++|||+.+++++|++
T Consensus 239 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 277 (283)
T 3gen_A 239 -RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 277 (283)
T ss_dssp -CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred -CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence 011112223678999999999999999999999999976
No 40
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=366.01 Aligned_cols=260 Identities=28% Similarity=0.365 Sum_probs=212.9
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC--------CCcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeeeeeeeecC
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS--------DGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTE 370 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~ 370 (623)
.++|.+.+.||+|+||.||+|... ++..||||+++.........++.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 367888999999999999999852 34689999998765444556799999999999 899999999999999
Q ss_pred CceEEEEecccCCChhhhhhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE
Q 006968 371 NERLLVYPYMPNGSVASRLRDHIH------------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL 438 (623)
Q Consensus 371 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll 438 (623)
+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 999999999999999999986532 124599999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeecccccccCCCCC-ceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCccccccccc
Q 006968 439 DEDFEAVVGDFGLAKLLDHRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRG 516 (623)
Q Consensus 439 ~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~ 516 (623)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~----- 299 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV----- 299 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----
Confidence 9999999999999987654332 22334457899999999999999999999999999999999 9999864321
Q ss_pred chHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 517 VMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
.+....... +.. ...+...+.++.+++.+||+.||++|||+.||+++|+..
T Consensus 300 --~~~~~~~~~-~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 300 --EELFKLLKE-GHR---------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp --HHHHHHHHT-TCC---------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHHHHHHc-CCC---------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111222211 111 111122346789999999999999999999999999873
No 41
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.6e-42 Score=355.76 Aligned_cols=259 Identities=30% Similarity=0.415 Sum_probs=211.6
Q ss_pred hcCCCcCCceeccCCeEEEEEEe------CCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCce
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCF------SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENER 373 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 373 (623)
.++|.+.+.||+|+||.||+|.. .++..||||+++..........+.+|+++++.++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46788899999999999999985 245889999997655444456789999999999999999999999999999
Q ss_pred EEEEecccCCChhhhhhhccC--------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCC
Q 006968 374 LLVYPYMPNGSVASRLRDHIH--------------------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~ 433 (623)
++||||+++|+|.+++..... ....+++..++.++.|+++||+|||++ +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999986432 123489999999999999999999999 999999999
Q ss_pred CCeEECCCCcEEEeecccccccCCCCCce-eeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccc
Q 006968 434 ANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRA 511 (623)
Q Consensus 434 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~ 511 (623)
+||+++.++.+||+|||+++......... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99999999999999999998765433222 233457889999999998899999999999999999999 9999864332
Q ss_pred cccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 512 ANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.. .... . ..+. ....+...+.++.+++.+||+.||++|||+.+++++|+.
T Consensus 259 ~~----~~~~---~-~~~~---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~ 308 (314)
T 2ivs_A 259 ER----LFNL---L-KTGH---------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308 (314)
T ss_dssp GG----HHHH---H-HTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HH----HHHH---h-hcCC---------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11 1111 1 1111 011122234679999999999999999999999999986
No 42
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.3e-42 Score=358.75 Aligned_cols=255 Identities=25% Similarity=0.429 Sum_probs=201.4
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCc----EEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGA----LVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 375 (623)
++|...+.||+|+||.||+|.+. +++ .||+|.++..........|.+|+.++++++||||+++++++... ..++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEE
Confidence 56888999999999999999864 344 46888887655555667899999999999999999999999875 4789
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
|+||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 94 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 99999999999999864 34699999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCc-eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 456 DHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 456 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
...... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... ... ....+.
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~~----~~~~~~--- 236 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----ISS----ILEKGE--- 236 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHH----HHHTTC---
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH----HHH----HHHcCC---
Confidence 544332 2233457889999999999999999999999999999999 999997432211 111 111111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
....+...+.++.+++.+||+.+|++|||+.+++++|+..
T Consensus 237 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 237 ------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp ------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred ------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1111223346789999999999999999999999999874
No 43
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1e-42 Score=361.80 Aligned_cols=261 Identities=25% Similarity=0.386 Sum_probs=212.5
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeC------CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCc
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENE 372 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 372 (623)
..++|.+.+.||+|+||.||+|... +++.||||+++..........|.+|+.++++++||||+++++++...+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4567899999999999999999874 3488999999865544445679999999999999999999999999999
Q ss_pred eEEEEecccCCChhhhhhhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCC
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHG--------------------RPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVK 432 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk 432 (623)
.++||||+++|+|.+++...... ...+++..++.++.|+++||+|||++ +|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 99999999999999999864221 25799999999999999999999999 99999999
Q ss_pred CCCeEECCCCcEEEeecccccccCCCCC-ceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCccc
Q 006968 433 AANILLDEDFEAVVGDFGLAKLLDHRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGR 510 (623)
Q Consensus 433 ~~NIll~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~ 510 (623)
|+||+++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999986643222 22234458899999999998899999999999999999999 999986432
Q ss_pred ccccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 511 AANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
. .+..... ..+... ..+...+.++.+++.+||+.||++|||+.+++++|++.
T Consensus 282 ~-------~~~~~~~-~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~ 333 (343)
T 1luf_A 282 H-------EEVIYYV-RDGNIL---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333 (343)
T ss_dssp H-------HHHHHHH-HTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred h-------HHHHHHH-hCCCcC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHH
Confidence 1 1111111 112111 11222346789999999999999999999999999884
No 44
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.4e-42 Score=357.79 Aligned_cols=255 Identities=23% Similarity=0.316 Sum_probs=204.0
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
++|.+.+.||+|+||.||+|... +++.||||++...........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 57899999999999999999876 78999999997655444456789999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 459 (623)
+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++..+....
T Consensus 87 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 87 CSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp CTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred CCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 999999998864 34699999999999999999999999 99999999999999999999999999998654322
Q ss_pred C-ceeeccccccccccccccccCCC-CCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 460 S-HVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 460 ~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
. .......||+.|+|||++.+..+ +.++||||||+++|||++|+.||........ ....|. .......
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~~~~----~~~~~~~---- 229 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDWK----EKKTYLN---- 229 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH--HHHHHH----TTCTTST----
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHHh----cccccCC----
Confidence 1 22334569999999999987765 7899999999999999999999974332111 111111 1110000
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
.......++.+++.+||..||++|||+.|++++-.
T Consensus 230 -----~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~ 264 (323)
T 3tki_A 230 -----PWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264 (323)
T ss_dssp -----TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred -----ccccCCHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence 01122367889999999999999999999988644
No 45
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.3e-42 Score=350.78 Aligned_cols=256 Identities=21% Similarity=0.354 Sum_probs=197.4
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCC----CcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSD----GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 375 (623)
.++|.+.+.||+|+||.||+|.... +..||+|+++..........+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 3578889999999999999998742 56799999876544444567999999999999999999999984 567899
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 93 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccccc
Confidence 99999999999999764 34689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... . .........
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~----~---~~~i~~~~~---- 235 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND----V---IGRIENGER---- 235 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----H---HHHHHTTCC----
T ss_pred CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH----H---HHHHHcCCC----
Confidence 5543333344457889999999998899999999999999999997 899986432211 1 111111110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
...+...+..+.+++.+||+.||++|||+.|++++|+..
T Consensus 236 ------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 236 ------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 011223346789999999999999999999999999873
No 46
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=9.5e-42 Score=346.90 Aligned_cols=259 Identities=24% Similarity=0.324 Sum_probs=205.3
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc--chHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG--GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
++|.+.+.||+|+||.||+|... ++..||+|.+....... ....+.+|+.++++++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 57889999999999999999865 68999999986543322 2356899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 91 e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 91 EYIEGPTLSEYIESH----GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp ECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred eCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 999999999999764 3699999999999999999999999 999999999999999999999999999987655
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
..........||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ........ ..... ...
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~-~~~~~-~~~ 234 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-------SIAIKHIQ-DSVPN-VTT 234 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-------HHHHHHHS-SCCCC-HHH
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhh-ccCCC-cch
Confidence 4434444566999999999999999999999999999999999999999743221 11111111 11110 001
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhhcC
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRP-KMSEVLKMLEGD 579 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-s~~evl~~L~~~ 579 (623)
.. ....+..+.+++.+|++.||++|| ++.++.+.|+..
T Consensus 235 ~~----~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 235 DV----RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HS----CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred hc----ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 11 122346789999999999999998 899999999874
No 47
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.7e-42 Score=377.78 Aligned_cols=257 Identities=27% Similarity=0.411 Sum_probs=213.3
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCC-CcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
..+|.+.+.||+|+||.||+|.+.. +..||||.++... ....+|.+|+.++++++||||++++++|...+..++|||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc--cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 3568888999999999999999864 8899999997643 235679999999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++|+|.++++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 297 ~~~~g~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 297 FMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp CCTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred ccCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 999999999998642 34689999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
.........+++.|+|||.+....++.++||||||+++|||++ |+.||...... ..... +..
T Consensus 372 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~----~~~~~---~~~---------- 434 (495)
T 1opk_A 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYEL---LEK---------- 434 (495)
T ss_dssp CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHH---HHT----------
T ss_pred ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHH---HHc----------
Confidence 3333333456789999999998999999999999999999999 88998643221 11111 111
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCC
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDG 580 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~ 580 (623)
......+..++.++.+++.+||+.||++|||+.+|++.|+...
T Consensus 435 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 435 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 1111222334578999999999999999999999999998854
No 48
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.9e-41 Score=354.05 Aligned_cols=255 Identities=20% Similarity=0.246 Sum_probs=208.1
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-----chHHHHHHHHHHhhcCCCceeeeeeeeecCCce
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-----GEVQFQTEVETISLAVHRNLLRLCGFCSTENER 373 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 373 (623)
.+.|.+.+.||+|+||.||+|... +|+.||+|.++...... ....+.+|+.+++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 367889999999999999999975 68999999997654322 245789999999999999999999999999999
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC----cEEEeec
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF----EAVVGDF 449 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~Df 449 (623)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 999999999999999865 34699999999999999999999999 999999999999998877 7999999
Q ss_pred ccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcC
Q 006968 450 GLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEG 529 (623)
Q Consensus 450 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 529 (623)
|++....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... +....+.. .
T Consensus 164 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-------~~~~~i~~-~ 233 (361)
T 2yab_A 164 GLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-------ETLANITA-V 233 (361)
T ss_dssp SSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------HHHHHHHT-T
T ss_pred CCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHh-c
Confidence 9998765432 234456999999999999989999999999999999999999999643221 11111111 1
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 530 KLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
.. ..+.... ...+.++.+++.+||..||++|||+.|++++-.
T Consensus 234 ~~--~~~~~~~----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 275 (361)
T 2yab_A 234 SY--DFDEEFF----SQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275 (361)
T ss_dssp CC--CCCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred CC--CCCchhc----cCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcC
Confidence 00 0000000 112367899999999999999999999987644
No 49
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9.2e-43 Score=376.12 Aligned_cols=255 Identities=23% Similarity=0.390 Sum_probs=210.2
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
.++|.+.+.||+|+||.||+|.+.++..||||+++... .....|.+|+.++++++||||+++++++. .+..++||||
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 46788899999999999999999889999999997643 34668999999999999999999999986 6678999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 459 (623)
+++|+|.++++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 264 ~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 264 MAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp CTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred cCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 99999999997532 23578999999999999999999999 99999999999999999999999999998765332
Q ss_pred CceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCccccccccc
Q 006968 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKD 538 (623)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (623)
........++..|+|||.+....++.++||||||+++|||+| |+.||..... .+....+.....
T Consensus 339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~-------~~~~~~i~~~~~-------- 403 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-------PEVIRALERGYR-------- 403 (454)
T ss_dssp HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHHHHHTCC--------
T ss_pred eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCC--------
Confidence 222233446789999999998999999999999999999999 9999864221 111222211111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 539 LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
...+...+.++.+++.+||+.||++|||+.+|++.|++.
T Consensus 404 --~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~ 442 (454)
T 1qcf_A 404 --MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442 (454)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 111223457899999999999999999999999999884
No 50
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=5.9e-42 Score=349.28 Aligned_cols=260 Identities=25% Similarity=0.355 Sum_probs=202.1
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhh--cCCCceeeeeeeeec----CCce
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL--AVHRNLLRLCGFCST----ENER 373 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~----~~~~ 373 (623)
.++|.+.+.||+|+||.||+|.. +|+.||||+++.. ....+..|.+++.. ++||||+++++++.. ....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 46788999999999999999988 7899999998653 34456777777766 789999999998654 3457
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCeEECCCCcEE
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH--------EQCDPKIIHRDVKAANILLDEDFEAV 445 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlk~~NIll~~~~~~k 445 (623)
++||||+++|+|.++++. ..+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+|
T Consensus 82 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEECCCTTCBHHHHHTT-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEE
T ss_pred EEehhhccCCCHHHHHhh-----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEE
Confidence 999999999999999954 36999999999999999999999 77 999999999999999999999
Q ss_pred EeecccccccCCCCCce---eeccccccccccccccccC------CCCCccchhhHHHHHHHHHhC----------CCCC
Q 006968 446 VGDFGLAKLLDHRDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELITG----------QRAL 506 (623)
Q Consensus 446 l~Dfgla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~SlGvil~elltg----------~~p~ 506 (623)
|+|||+++......... .....||+.|+|||.+.+. .++.++||||||+++|||++| +.||
T Consensus 154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp ECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 99999998765443322 2234699999999999876 455799999999999999999 7777
Q ss_pred CcccccccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 507 DFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
........ ....+............+.. ..+....+.++.+++.+||+.||++|||+.||++.|+.
T Consensus 234 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 234 YDVVPNDP---SFEDMRKVVCVDQQRPNIPN---RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp TTTSCSSC---CHHHHHHHHTTSCCCCCCCG---GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cccCCCCc---chhhhhHHHhccCCCCCCCh---hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 53222111 11111221111111111100 11233567889999999999999999999999999986
No 51
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=7.5e-42 Score=353.84 Aligned_cols=251 Identities=23% Similarity=0.274 Sum_probs=208.0
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc--ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
++|++.+.||+|+||.||+|... +|+.||+|++++... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57888999999999999999975 689999999976432 233456889999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++|+|..++... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 85 E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 85 EYANGGELFFHLSRE----RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp ECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred eCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 999999999998763 3689999999999999999999999 999999999999999999999999999986432
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......... +..
T Consensus 158 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~-~~~------ 222 (337)
T 1o6l_A 158 DG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------ERLFELILM-EEI------ 222 (337)
T ss_dssp TT-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH-CCC------
T ss_pred CC-CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-------HHHHHHHHc-CCC------
Confidence 22 233456799999999999999999999999999999999999999964321 111111111 110
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhh
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRP-----KMSEVLKMLE 577 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~L~ 577 (623)
.++...+.++.+++.+||..||++|| ++.|++++-.
T Consensus 223 ----~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~ 263 (337)
T 1o6l_A 223 ----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263 (337)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred ----CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCC
Confidence 11222346789999999999999999 8999988643
No 52
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=7.7e-42 Score=362.32 Aligned_cols=266 Identities=20% Similarity=0.275 Sum_probs=213.3
Q ss_pred HHHHHHhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc--ccchHHHHHHHHHHhhcCCCceeeeeeeeecC
Q 006968 294 KELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTE 370 (623)
Q Consensus 294 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 370 (623)
.+++...++|.+.+.||+|+||.||+|... +++.||+|++++... ......+.+|+.+++.++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 445556678999999999999999999976 589999999975322 12234588999999999999999999999999
Q ss_pred CceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecc
Q 006968 371 NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFG 450 (623)
Q Consensus 371 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfg 450 (623)
+..++||||+++|+|.++++.. .+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG 213 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 213 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccc
Confidence 9999999999999999998753 589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCC----CCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHh
Q 006968 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQ----SSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLH 526 (623)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 526 (623)
+++.............+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... +....+.
T Consensus 214 ~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-------~~~~~i~ 286 (410)
T 3v8s_A 214 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-------GTYSKIM 286 (410)
T ss_dssp TCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHH
T ss_pred eeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-------hHHHHHH
Confidence 99876654433444667999999999997655 789999999999999999999999743221 1111111
Q ss_pred hcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHhhcCCC
Q 006968 527 QEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLH--RPKMSEVLKMLEGDGL 581 (623)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPs~~evl~~L~~~~~ 581 (623)
.... .. .... ....+.++.+++.+||..+|++ ||++.||++|-.-..+
T Consensus 287 ~~~~--~~---~~p~--~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 287 NHKN--SL---TFPD--DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp THHH--HC---CCCT--TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred hccc--cc---cCCC--cccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 1000 00 0000 0012367899999999999998 9999999997655443
No 53
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.5e-42 Score=367.69 Aligned_cols=266 Identities=18% Similarity=0.231 Sum_probs=213.0
Q ss_pred HHHHHHHhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc--cchHHHHHHHHHHhhcCCCceeeeeeeeec
Q 006968 293 FKELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA--GGEVQFQTEVETISLAVHRNLLRLCGFCST 369 (623)
Q Consensus 293 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 369 (623)
+.+++...++|++.++||+|+||+||+|... +++.||||++++.... .....+.+|+.++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4455566789999999999999999999986 4789999999753221 223348999999999999999999999999
Q ss_pred CCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeec
Q 006968 370 ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDF 449 (623)
Q Consensus 370 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Df 449 (623)
.+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 99999999999999999999763 34699999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCceeeccccccccccccccc-----cCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHH
Q 006968 450 GLAKLLDHRDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524 (623)
Q Consensus 450 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 524 (623)
|+++.............+||+.|+|||++. ...++.++|||||||++|||++|+.||........ ...
T Consensus 220 Gla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-------~~~ 292 (437)
T 4aw2_A 220 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-------YGK 292 (437)
T ss_dssp TTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------HHH
T ss_pred hhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-------HHh
Confidence 999876655444445567999999999987 56789999999999999999999999974332111 111
Q ss_pred HhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHhh
Q 006968 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLH--RPKMSEVLKMLE 577 (623)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPs~~evl~~L~ 577 (623)
+..... ...-+.... ..+.++.+++.+||..+|++ ||++.|++++-.
T Consensus 293 i~~~~~--~~~~p~~~~----~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpf 341 (437)
T 4aw2_A 293 IMNHKE--RFQFPTQVT----DVSENAKDLIRRLICSREHRLGQNGIEDFKKHPF 341 (437)
T ss_dssp HHTHHH--HCCCCSSCC----CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGG
T ss_pred hhhccc--cccCCcccc----cCCHHHHHHHHHHhcccccccCCCCHHHHhCCCc
Confidence 110000 000000001 12367889999999988888 999999998644
No 54
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.6e-42 Score=357.76 Aligned_cols=257 Identities=27% Similarity=0.420 Sum_probs=204.5
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCc----EEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGA----LVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 375 (623)
++|.+.+.||+|+||.||+|.+. ++. .||+|.+...........+.+|+.+++.++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 56888899999999999999864 344 388888865544444556889999999999999999999986 567899
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence 99999999999999754 34689999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCCc-eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 456 DHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 456 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
...... ......||..|+|||.+.+..++.++||||||+++|||++ |+.||...... .... .. ..+..
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~---~~-~~~~~-- 235 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA----EVPD---LL-EKGER-- 235 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT----HHHH---HH-HTTCB--
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH----HHHH---HH-HcCCC--
Confidence 544332 2344568889999999999999999999999999999999 99999743221 1111 11 11110
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCC
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGL 581 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~ 581 (623)
...+...+.++.+++.+||..||++|||+.+++++|+....
T Consensus 236 -------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 236 -------LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp -------CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred -------CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 01111223467899999999999999999999999988533
No 55
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.2e-42 Score=353.42 Aligned_cols=267 Identities=24% Similarity=0.326 Sum_probs=193.5
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
.++|.+.+.||+|+||.||+|... +|+.||||+++..........+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467899999999999999999875 6899999999765544445678999999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccC
Q 006968 379 YMPNGSVASRLRDHIH--GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~ 456 (623)
|++ |+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 699999876422 224589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcC---ccc
Q 006968 457 HRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEG---KLS 532 (623)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 532 (623)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ...+....... ...
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~ 234 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ----LKLIFDIMGTPNESLWP 234 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHHCSCCTTTCG
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHHhCCCChhHhh
Confidence 3322 2234468999999999876 4689999999999999999999999974332111 11111110000 000
Q ss_pred cc-----cccccC----C--------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 533 QM-----VDKDLK----G--------NFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 533 ~~-----~~~~~~----~--------~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.. ..+... . ........++.+++.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00 000000 0 0001123578999999999999999999999875
No 56
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.2e-42 Score=349.26 Aligned_cols=264 Identities=21% Similarity=0.313 Sum_probs=201.5
Q ss_pred cCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
++|.+.+.||+|+||.||+|...+|+.||||+++..... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 468889999999999999999988999999999754422 2235688999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 459 (623)
+++ +|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 975 888888753 34689999999999999999999999 99999999999999999999999999998765332
Q ss_pred Cceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhc--Ccccc---
Q 006968 460 SHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQE--GKLSQ--- 533 (623)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--- 533 (623)
. ......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||........ .....+..... .....
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T 1ob3_A 155 R-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ---LMRIFRILGTPNSKNWPNVTE 230 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGG
T ss_pred c-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHHCCCChhhchhhhc
Confidence 2 2233458999999999876 4589999999999999999999999974332111 11111110000 00000
Q ss_pred --ccccccC-------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 534 --MVDKDLK-------GNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 534 --~~~~~~~-------~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
..++... ..+....+.++.+++.+||+.||++|||+.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000 00111234678899999999999999999999875
No 57
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.7e-42 Score=353.77 Aligned_cols=265 Identities=22% Similarity=0.280 Sum_probs=202.5
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEeccccccc-chHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
.++|.+.+.||+|+||+||+|...+|+.||||+++...... ....+.+|++++++++||||+++++++..++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 36788999999999999999999889999999997544322 23568899999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 100 ~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 100 FMEK-DLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp CCSE-EHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred CCCC-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 9974 788777653 34699999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcc---ccc
Q 006968 459 DSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKL---SQM 534 (623)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 534 (623)
.. ......||+.|+|||.+.+ ..++.++||||+|+++|||++|+.||........ ...+......... ...
T Consensus 173 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~ 247 (311)
T 3niz_A 173 VR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ----LPKIFSILGTPNPREWPQV 247 (311)
T ss_dssp CC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH----HHHHHHHHCCCCTTTSGGG
T ss_pred cc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHHHCCCChHHhhhh
Confidence 22 2333468999999999876 5689999999999999999999999974332211 1111111110000 000
Q ss_pred c------ccccC--CCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 535 V------DKDLK--GNF-----DRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 535 ~------~~~~~--~~~-----~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
. +.... ... ......++.+++.+||..||++|||+.|++++-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 302 (311)
T 3niz_A 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHP 302 (311)
T ss_dssp TTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred hccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 0 00000 000 011235788999999999999999999999853
No 58
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-42 Score=358.10 Aligned_cols=262 Identities=26% Similarity=0.380 Sum_probs=209.3
Q ss_pred HhcCCCcCCceeccCCeEEEEEEe------CCCcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeeeeeeeecCC
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCF------SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTEN 371 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 371 (623)
..++|.+.+.||+|+||.||+|.. .++..||||+++..........+.+|+.++.++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 346789999999999999999986 246789999998655444556799999999999 8999999999999999
Q ss_pred ceEEEEecccCCChhhhhhhccCC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCC
Q 006968 372 ERLLVYPYMPNGSVASRLRDHIHG-------------------RPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVK 432 (623)
Q Consensus 372 ~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk 432 (623)
..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 999999999999999999764321 13489999999999999999999999 99999999
Q ss_pred CCCeEECCCCcEEEeecccccccCCCCCc-eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCccc
Q 006968 433 AANILLDEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGR 510 (623)
Q Consensus 433 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~ 510 (623)
|+||+++.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 99999999999999999999866543322 2334457889999999999999999999999999999998 999986432
Q ss_pred ccccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 511 AANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
... . .......+ .....+...+.++.+++.+||+.||.+|||+.+++++|+..
T Consensus 280 ~~~------~-~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 332 (344)
T 1rjb_A 280 VDA------N-FYKLIQNG---------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332 (344)
T ss_dssp CSH------H-HHHHHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cHH------H-HHHHHhcC---------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 111 1 11111111 11111222347799999999999999999999999999874
No 59
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.4e-41 Score=354.53 Aligned_cols=256 Identities=20% Similarity=0.286 Sum_probs=206.8
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc----ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI----AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 375 (623)
+.|.+.+.||+|+||.||+|... +|+.||||+++.... ......+.+|+.+++.++||||+++++++...+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 56889999999999999999875 689999999864321 1235679999999999999999999999999999999
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCc---EEEeecccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE---AVVGDFGLA 452 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~Dfgla 452 (623)
||||+++|+|.+++.........+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 9999999999988876544455689999999999999999999999 9999999999999986654 999999999
Q ss_pred cccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccc
Q 006968 453 KLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLS 532 (623)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (623)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........ +...
T Consensus 181 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~i~~-~~~~ 250 (351)
T 3c0i_A 181 IQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--------RLFEGIIK-GKYK 250 (351)
T ss_dssp EECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--------HHHHHHHH-TCCC
T ss_pred eEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--------HHHHHHHc-CCCC
Confidence 87654322 23345699999999999999999999999999999999999999964221 11111111 1110
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 533 QMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
..+.... ..+.++.+++.+||..||++|||+.|++++
T Consensus 251 --~~~~~~~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 251 --MNPRQWS----HISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp --CCHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --CCccccc----cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000000 123678999999999999999999999874
No 60
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.6e-42 Score=352.93 Aligned_cols=260 Identities=27% Similarity=0.391 Sum_probs=211.8
Q ss_pred hcCCCcCCceeccCCeEEEEEEe------CCCcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCc
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCF------SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENE 372 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~ 372 (623)
.++|.+.+.||+|+||.||+|.. .++..||||+++..........+.+|+.+++++ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 36788899999999999999984 357899999998655444556799999999999 99999999999999999
Q ss_pred eEEEEecccCCChhhhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE
Q 006968 373 RLLVYPYMPNGSVASRLRDHIH--------------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL 438 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll 438 (623)
.++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 9999999999999999986432 123589999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCc-eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCccccccccc
Q 006968 439 DEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRG 516 (623)
Q Consensus 439 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~ 516 (623)
+.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||.......
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--- 255 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--- 255 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH---
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh---
Confidence 99999999999999876544332 2233457889999999999999999999999999999999 999986432111
Q ss_pred chHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 517 VMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.. ........ ....+...+.++.+++.+||+.||.+|||+.|++++|++
T Consensus 256 ---~~-~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 304 (313)
T 1t46_A 256 ---KF-YKMIKEGF---------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (313)
T ss_dssp ---HH-HHHHHHTC---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---HH-HHHhccCC---------CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 11 11111110 011112234678999999999999999999999999976
No 61
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.2e-42 Score=371.58 Aligned_cols=255 Identities=27% Similarity=0.380 Sum_probs=204.6
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
.++|.+.+.||+|+||.||+|.+.++..||||+++... ....+|.+|++++++++||||+++++++.. +..++||||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 35688889999999999999999888889999997643 235679999999999999999999999876 678999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 459 (623)
+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 260 ~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 260 MSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp CTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred hcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 99999999997532 23589999999999999999999999 99999999999999999999999999998765433
Q ss_pred CceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCccccccccc
Q 006968 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKD 538 (623)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (623)
........++..|+|||.+....++.++||||||+++|||++ |+.||..... .+....+....
T Consensus 335 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-------~~~~~~i~~~~--------- 398 (452)
T 1fmk_A 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------REVLDQVERGY--------- 398 (452)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHHTTC---------
T ss_pred eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCC---------
Confidence 333334457889999999999999999999999999999999 8999863221 11122221111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 539 LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
....+...+..+.+++.+||+.||++|||+.++++.|++.
T Consensus 399 -~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~ 438 (452)
T 1fmk_A 399 -RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438 (452)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred -CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1112233457899999999999999999999999999884
No 62
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-41 Score=347.82 Aligned_cols=254 Identities=20% Similarity=0.233 Sum_probs=207.5
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
.++|.+.+.||+|+||.||+|... ++..||+|.++... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 367889999999999999999975 58899999986432 334568899999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC--CCcEEEeecccccccC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE--DFEAVVGDFGLAKLLD 456 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~--~~~~kl~Dfgla~~~~ 456 (623)
|+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||++....
T Consensus 82 ~~~g~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 82 FISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp CCCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred eCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 99999999998653 34689999999999999999999999 9999999999999997 7899999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||..... .+.......... . .+
T Consensus 156 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~-~--~~ 223 (321)
T 1tki_A 156 PGD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-------QQIIENIMNAEY-T--FD 223 (321)
T ss_dssp TTC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHTCC-C--CC
T ss_pred CCC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-------HHHHHHHHcCCC-C--CC
Confidence 432 23445699999999999988899999999999999999999999964322 111222211110 0 00
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
.... ...+.++.+++.+||..||++|||+.|++++-.
T Consensus 224 ~~~~----~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 260 (321)
T 1tki_A 224 EEAF----KEISIEAMDFVDRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp HHHH----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred hhhh----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcChh
Confidence 0000 012367899999999999999999999998543
No 63
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.3e-42 Score=344.77 Aligned_cols=253 Identities=26% Similarity=0.423 Sum_probs=210.0
Q ss_pred cCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEecc
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYM 380 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 380 (623)
++|.+.+.||+|+||.||+|...++..||+|+++.... ....+.+|++++++++||||+++++++...+..++||||+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 56888899999999999999998899999999976542 3467999999999999999999999999999999999999
Q ss_pred cCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCCC
Q 006968 381 PNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDS 460 (623)
Q Consensus 381 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 460 (623)
++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 86 EHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp TTCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 999999999764 34689999999999999999999999 999999999999999999999999999987643222
Q ss_pred ceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCcccccccccc
Q 006968 461 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539 (623)
Q Consensus 461 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (623)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ............
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~i~~~~~--------- 223 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-------SEVVEDISTGFR--------- 223 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTTCC---------
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-------HHHHHHHhcCCc---------
Confidence 22233457789999999998899999999999999999999 8999864321 111122111100
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
...+...+..+.+++.+||+.||++|||+.+++++|++
T Consensus 224 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (267)
T 3t9t_A 224 -LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 261 (267)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 01112234678999999999999999999999999976
No 64
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5e-42 Score=354.62 Aligned_cols=253 Identities=21% Similarity=0.316 Sum_probs=201.7
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCC-------
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN------- 371 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------- 371 (623)
.++|++.+.||+|+||.||+|... +|+.||||+++..........+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356889999999999999999986 799999999986554555678999999999999999999999885543
Q ss_pred --------------------------------------------------ceEEEEecccCCChhhhhhhccCCCCCCCH
Q 006968 372 --------------------------------------------------ERLLVYPYMPNGSVASRLRDHIHGRPALDW 401 (623)
Q Consensus 372 --------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~ 401 (623)
..++||||+++|+|.+++.... .....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-Cccchhh
Confidence 2799999999999999998643 2345678
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCCC-----------ceeecccccc
Q 006968 402 ARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDS-----------HVTTAVRGTV 470 (623)
Q Consensus 402 ~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~-----------~~~~~~~gt~ 470 (623)
..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 88999999999999999999 999999999999999999999999999987765421 1123346999
Q ss_pred ccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccccccCCCCCHHHHHH
Q 006968 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEE 550 (623)
Q Consensus 471 ~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (623)
.|+|||.+.+..++.++||||||+++|||++|..|+... ....... ....... .......+
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~---------~~~~~~~-~~~~~~~---------~~~~~~~~ 301 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER---------VRIITDV-RNLKFPL---------LFTQKYPQ 301 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH---------HHHHHHH-HTTCCCH---------HHHHHCHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH---------HHHHHHh-hccCCCc---------ccccCChh
Confidence 999999999999999999999999999999987765310 0011111 0111000 01223466
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 551 MVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 551 l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
+.+++.+||+.||++|||+.|++++
T Consensus 302 ~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 302 EHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHccCCCCcCCCHHHHhhc
Confidence 7899999999999999999999975
No 65
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4.2e-42 Score=349.57 Aligned_cols=262 Identities=25% Similarity=0.404 Sum_probs=203.3
Q ss_pred cCCCcCCceeccCCeEEEEEEe-----CCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeec--CCce
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCST--ENER 373 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~ 373 (623)
++|++.+.||+|+||.||+|.+ .+++.||||+++... ......+.+|++++++++||||+++++++.. ....
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 5788899999999999999984 368999999997543 2334578999999999999999999999854 3568
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp EEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred EEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 9999999999999999764 23589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc--eeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccc-------cccc-hHHHHH
Q 006968 454 LLDHRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAAN-------QRGV-MLDWVK 523 (623)
Q Consensus 454 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~-------~~~~-~~~~~~ 523 (623)
........ ......++..|+|||.+.+..++.++||||||+++|||++|..|+....... .... ....+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence 76543221 2233457788999999999999999999999999999999999986432110 0000 000111
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 524 KLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.... .......+...+.++.+++.+||+.||++|||+.|+++.|+.
T Consensus 243 ~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~ 288 (295)
T 3ugc_A 243 ELLK---------NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288 (295)
T ss_dssp HHHH---------TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHh---------ccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 1111 111111233345789999999999999999999999999976
No 66
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.2e-41 Score=366.80 Aligned_cols=249 Identities=29% Similarity=0.404 Sum_probs=204.8
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCC-ceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN-ERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-~~~lv~e 378 (623)
.++|.+.+.||+|+||.||+|.+ .|+.||||+++... ....|.+|+.++++++||||+++++++...+ ..++|||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 35688889999999999999998 47899999997643 3567999999999999999999999987655 7899999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++|+|.++++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp CCTTCBHHHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred ecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 999999999998642 33579999999999999999999999 9999999999999999999999999999854322
Q ss_pred CCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
.....+++.|+|||.+.+..++.++||||||+++|||+| |+.||....... . ...+.. +
T Consensus 343 ----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~----~---~~~i~~-~-------- 402 (450)
T 1k9a_A 343 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD----V---VPRVEK-G-------- 402 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT----H---HHHHHT-T--------
T ss_pred ----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH----H---HHHHHc-C--------
Confidence 122357889999999999999999999999999999998 999986432211 1 111111 1
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.....+..++.++.+++.+||+.||++|||+.++++.|++
T Consensus 403 -~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~ 442 (450)
T 1k9a_A 403 -YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH 442 (450)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1111223345789999999999999999999999999976
No 67
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.8e-41 Score=343.82 Aligned_cols=258 Identities=29% Similarity=0.423 Sum_probs=200.8
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
.++|.+.+.||+|+||.||+|... ..+|+|.++..... .....|.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 367888999999999999999864 36999998764432 23357899999999999999999999875 556899999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred cCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 99999999999753 45699999999999999999999999 9999999999999999999999999999865432
Q ss_pred -CCceeeccccccccccccccc---cCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 459 -DSHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 459 -~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
.........||+.|+|||.+. +..++.++||||||+++|||++|+.||....... .+......+...
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~-------~~~~~~~~~~~~-- 256 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-------QIIFMVGRGYAS-- 256 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-------HHHHHHHHTCCC--
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH-------HHHHHHhcCCCC--
Confidence 222233456999999999986 5678899999999999999999999996432211 111111111111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
+.+. .....++..+.+++.+||+.+|++|||+.|++++|+.
T Consensus 257 --~~~~-~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~ 297 (307)
T 3lb7_A 257 --PDLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp --CCST-TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHH
T ss_pred --cchh-hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHH
Confidence 1110 1112234679999999999999999999999999986
No 68
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=5e-41 Score=346.69 Aligned_cols=254 Identities=19% Similarity=0.260 Sum_probs=206.9
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-----chHHHHHHHHHHhhcCCCceeeeeeeeecCCceE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-----GEVQFQTEVETISLAVHRNLLRLCGFCSTENERL 374 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 374 (623)
++|.+.+.||+|+||.||+|... +|..||||+++...... ....+.+|+.+++.++||||+++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 56888999999999999999975 68999999997654321 3457899999999999999999999999999999
Q ss_pred EEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC----cEEEeecc
Q 006968 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF----EAVVGDFG 450 (623)
Q Consensus 375 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~Dfg 450 (623)
+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 91 LILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 99999999999999865 34699999999999999999999999 999999999999999887 79999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCc
Q 006968 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530 (623)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (623)
+++...... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||...... +.........
T Consensus 164 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~~~~~~- 233 (326)
T 2y0a_A 164 LAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-------ETLANVSAVN- 233 (326)
T ss_dssp TCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------HHHHHHHHTC-
T ss_pred CCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-------HHHHHHHhcC-
Confidence 998765332 223456999999999999899999999999999999999999999643221 1111111110
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 531 LSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
.. ...... ...+..+.+++.+||..||++|||+.|++++-.
T Consensus 234 ~~--~~~~~~----~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 274 (326)
T 2y0a_A 234 YE--FEDEYF----SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274 (326)
T ss_dssp CC--CCHHHH----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTT
T ss_pred CC--cCcccc----ccCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 00 000000 112367889999999999999999999998643
No 69
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=342.94 Aligned_cols=250 Identities=24% Similarity=0.339 Sum_probs=197.0
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-------------------------chHHHHHHHHHHhh
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-------------------------GEVQFQTEVETISL 354 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------------------------~~~~~~~e~~~l~~ 354 (623)
++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57889999999999999999874 68999999997543211 12468999999999
Q ss_pred cCCCceeeeeeeeec--CCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCC
Q 006968 355 AVHRNLLRLCGFCST--ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVK 432 (623)
Q Consensus 355 l~H~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk 432 (623)
++||||+++++++.. .+..++||||+++++|.+++. ...+++..+..++.|++.||+|||+. +|+|||||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 999999999999986 567899999999999887653 24699999999999999999999999 99999999
Q ss_pred CCCeEECCCCcEEEeecccccccCCCCCceeeccccccccccccccccCC---CCCccchhhHHHHHHHHHhCCCCCCcc
Q 006968 433 AANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELITGQRALDFG 509 (623)
Q Consensus 433 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~SlGvil~elltg~~p~~~~ 509 (623)
|+||+++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||...
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 243 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred HHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence 9999999999999999999987654332 234456999999999997655 378899999999999999999999632
Q ss_pred cccccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 510 RAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.. ..+...... ..... ... ...+.++.+++.+||+.||++|||+.|++++
T Consensus 244 ~~-------~~~~~~~~~-~~~~~----~~~----~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 244 RI-------MCLHSKIKS-QALEF----PDQ----PDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp SH-------HHHHHHHHH-CCCCC----CSS----SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred cH-------HHHHHHHhc-ccCCC----CCc----cccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 21 111121111 11100 001 1123678999999999999999999999764
No 70
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=6.7e-42 Score=345.51 Aligned_cols=255 Identities=21% Similarity=0.392 Sum_probs=204.7
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCC----CcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSD----GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 375 (623)
.++|.+.+.||+|+||.||+|.+.+ +..||||.++..........+.+|+.+++.++||||+++++++.. +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4678889999999999999998642 346999999866544456679999999999999999999999864 46789
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 90 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 90 IMELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp EEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred EEecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 99999999999999764 34689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
............+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... .. .........
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~----~~---~~~~~~~~~--- 233 (281)
T 3cc6_A 164 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD----VI---GVLEKGDRL--- 233 (281)
T ss_dssp ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG----HH---HHHHHTCCC---
T ss_pred ccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH----HH---HHHhcCCCC---
Confidence 5543333344557889999999998899999999999999999998 999996432211 11 111111110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
..+...+..+.+++.+||+.||++|||+.|++++|++
T Consensus 234 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 270 (281)
T 3cc6_A 234 -------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSD 270 (281)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHH
Confidence 1112234678999999999999999999999999987
No 71
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.1e-41 Score=350.16 Aligned_cols=258 Identities=17% Similarity=0.182 Sum_probs=207.1
Q ss_pred cCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCceEEEEe
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e 378 (623)
.+|.+.+.||+|+||.||+|.. .+|+.||||+++... ....+.+|+++++.+ +||||+++++++...+..++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS---RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC---SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc---chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 5788899999999999999996 478999999986543 234688999999999 99999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCc-----EEEeeccccc
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE-----AVVGDFGLAK 453 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-----~kl~Dfgla~ 453 (623)
|+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++
T Consensus 86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 86 LL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred eC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 99 99999999864 34799999999999999999999999 9999999999999998887 9999999998
Q ss_pred ccCCCCCc------eeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhh
Q 006968 454 LLDHRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQ 527 (623)
Q Consensus 454 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 527 (623)
.+...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~----~~~~~~~i~~ 234 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT----LKERYQKIGD 234 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS----HHHHHHHHHH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc----HHHHHHHHHh
Confidence 76543321 1235579999999999999999999999999999999999999997532211 1111111110
Q ss_pred cCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 528 EGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
... .. ....+.. ..+ ++.+++..||+.||.+||++.+|.+.|++.
T Consensus 235 ~~~-~~-~~~~~~~----~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 235 TKR-AT-PIEVLCE----NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp HHH-HS-CHHHHTT----TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred hhc-cC-CHHHHhc----cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 000 00 0000000 123 799999999999999999999999999863
No 72
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=7.7e-42 Score=343.01 Aligned_cols=253 Identities=27% Similarity=0.397 Sum_probs=195.0
Q ss_pred cCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccc---cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA---GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.+|.+.+.||+|+||.||+|.+ .|+.||||+++..... .....+.+|+++++.++||||+++++++..++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 5788899999999999999997 4899999998754322 22357899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC--------CCcEEEeec
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE--------DFEAVVGDF 449 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~--------~~~~kl~Df 449 (623)
||+++++|.+++.. ..+++..+..++.|++.||+|||++...+|+||||||+||+++. ++.+||+||
T Consensus 86 e~~~~~~L~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 86 EFARGGPLNRVLSG-----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp ECCTTEEHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EcCCCCCHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 99999999998853 36899999999999999999999992112999999999999986 678999999
Q ss_pred ccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcC
Q 006968 450 GLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEG 529 (623)
Q Consensus 450 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 529 (623)
|++....... .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... ........ .
T Consensus 161 g~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~-~ 229 (271)
T 3dtc_A 161 GLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL-------AVAYGVAM-N 229 (271)
T ss_dssp CC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH-------HHHHHHHT-S
T ss_pred Cccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHhhhc-C
Confidence 9998654332 22346899999999999999999999999999999999999999643221 11111111 1
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 530 KLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
. .....+...+.++.+++.+||+.||++|||+.|++++|+.
T Consensus 230 ~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 230 K--------LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp C--------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred C--------CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 1 1111222334679999999999999999999999999975
No 73
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=7.8e-41 Score=352.70 Aligned_cols=259 Identities=22% Similarity=0.291 Sum_probs=205.7
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc--chHHHHHHHHHHhhc-CCCceeeeeeeeecCCceEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG--GEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLL 375 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 375 (623)
.++|.+.++||+|+||.||+|... +++.||||++++..... ....+..|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357889999999999999999976 58899999998654322 233578899999877 89999999999999999999
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
||||+++|+|..++... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 99999999999999764 3699999999999999999999999 9999999999999999999999999999853
Q ss_pred CCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCccccccc-ccchHHHHHHHhhcCccccc
Q 006968 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ-RGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 534 (623)
... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+.+.........
T Consensus 204 ~~~-~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--- 279 (396)
T 4dc2_A 204 LRP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--- 279 (396)
T ss_dssp CCT-TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC---
T ss_pred ccC-CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc---
Confidence 322 2234556799999999999999999999999999999999999999964322111 11111222221111111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHHh
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKM------SEVLKML 576 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~------~evl~~L 576 (623)
.++...+.++.+++.+||+.||++||++ .|++++-
T Consensus 280 -------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hp 320 (396)
T 4dc2_A 280 -------RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 320 (396)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHST
T ss_pred -------CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCc
Confidence 1222234678999999999999999995 6676643
No 74
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.1e-41 Score=353.01 Aligned_cols=259 Identities=27% Similarity=0.387 Sum_probs=210.1
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC--------CCcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeeeeeeeecC
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS--------DGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTE 370 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~ 370 (623)
.++|.+.+.||+|+||.||+|... ++..||||+++..........+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467889999999999999999863 46789999997655444456789999999999 899999999999999
Q ss_pred CceEEEEecccCCChhhhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE
Q 006968 371 NERLLVYPYMPNGSVASRLRDHIHG------------RPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL 438 (623)
Q Consensus 371 ~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll 438 (623)
+..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 9999999999999999999864321 23489999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCc-eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCccccccccc
Q 006968 439 DEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRG 516 (623)
Q Consensus 439 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~ 516 (623)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----- 265 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----- 265 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-----
Confidence 99999999999999876543322 2233457889999999988889999999999999999999 9999864321
Q ss_pred chHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 517 VMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.+....... +.. ...+...+.++.+++.+||+.+|.+|||+.|+++.|+.
T Consensus 266 --~~~~~~~~~-~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 315 (334)
T 2pvf_A 266 --EELFKLLKE-GHR---------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315 (334)
T ss_dssp --HHHHHHHHH-TCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --HHHHHHHhc-CCC---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111111111 110 01112234678999999999999999999999999987
No 75
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-41 Score=352.04 Aligned_cols=249 Identities=20% Similarity=0.323 Sum_probs=204.2
Q ss_pred cCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEeccccc--ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.+|.+.+.||+|+||.||+|.. .+|+.||||+++.... ......+.+|+.+++.++||||+++++++..++..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788999999999999999997 4789999999965422 222346899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+ +|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 89 E~~-~g~l~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 89 EYA-GGELFDYIVEK----KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp CCC-CEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred ECC-CCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 999 78999888763 3699999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeccccccccccccccccCCC-CCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
.. .....+||+.|+|||.+.+..+ +.++||||||+++|+|++|+.||........ ...+..
T Consensus 161 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~----------------~~~i~~ 222 (336)
T 3h4j_B 161 GN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL----------------FKKVNS 222 (336)
T ss_dssp SB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC----------------BCCCCS
T ss_pred Cc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH----------------HHHHHc
Confidence 32 2234569999999999988776 7899999999999999999999964321111 000000
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
. ....+...+.++.+++.+||..||.+|||+.|++++-.
T Consensus 223 ~--~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 261 (336)
T 3h4j_B 223 C--VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPW 261 (336)
T ss_dssp S--CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHH
T ss_pred C--CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChh
Confidence 0 01122233467899999999999999999999987543
No 76
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=5.1e-41 Score=339.91 Aligned_cols=254 Identities=22% Similarity=0.261 Sum_probs=202.4
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
++|.+.+.||+|+||.||+|... ++..||+|++...........+.+|++++++++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 56888999999999999999875 68999999998766555667899999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE---CCCCcEEEeecccccccC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLD 456 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~Dfgla~~~~ 456 (623)
+++|+|.+++.........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999999976543346799999999999999999999999 99999999999999 456789999999998654
Q ss_pred CCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
... ......||+.|+|||.+. ..++.++||||||+++|||++|+.||...... +...............
T Consensus 179 ~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~- 247 (285)
T 3is5_A 179 SDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE-------EVQQKATYKEPNYAVE- 247 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCCCCC--
T ss_pred Ccc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH-------HHHhhhccCCcccccc-
Confidence 332 233456899999999875 56899999999999999999999999643211 1111111111100000
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
... .+.++.+++.+||+.||++|||+.|++++
T Consensus 248 ---~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 248 ---CRP----LTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp ----CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ---cCc----CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001 23678899999999999999999999874
No 77
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.7e-41 Score=342.07 Aligned_cols=252 Identities=30% Similarity=0.514 Sum_probs=203.2
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccch------HHHHHHHHHHhhcCCCceeeeeeeeecCCce
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGE------VQFQTEVETISLAVHRNLLRLCGFCSTENER 373 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 373 (623)
++|.+.+.||+|+||.||+|... +++.||||++......... ..+.+|+.++++++||||+++++++....
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 67888999999999999999974 7899999998654433221 57899999999999999999999986554
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeEECCCCc-----EEE
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK--IIHRDVKAANILLDEDFE-----AVV 446 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~-----~kl 446 (623)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. + |+||||||+||+++.++. +||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp EEEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred eEEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 7999999999999988653 34699999999999999999999999 8 999999999999988776 999
Q ss_pred eecccccccCCCCCceeeccccccccccccccc--cCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHH
Q 006968 447 GDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS--TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524 (623)
Q Consensus 447 ~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 524 (623)
+|||+++.... ......||+.|+|||.+. ...++.++||||||+++|||++|+.||...... .......
T Consensus 171 ~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~ 241 (287)
T 4f0f_A 171 ADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG-----KIKFINM 241 (287)
T ss_dssp CCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC-----HHHHHHH
T ss_pred CCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc-----HHHHHHH
Confidence 99999975332 234456999999999983 456789999999999999999999999643221 1111222
Q ss_pred HhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....+ .....+...+.++.+++.+||+.||++|||+.|+++.|++
T Consensus 242 ~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 242 IREEG---------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HHHSC---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HhccC---------CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 21111 1112223334789999999999999999999999999975
No 78
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=9.5e-42 Score=345.55 Aligned_cols=257 Identities=28% Similarity=0.421 Sum_probs=213.9
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
...+|.+.+.||+|+||.||+|... ++..||+|.++... .....+.+|++++++++||||+++++++...+..++||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS--THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 3467888999999999999999986 48899999997543 34567899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 89 e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 89 EFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp ECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 999999999999764 235699999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
..........+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||....... ... ....
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~----~~~---~~~~--------- 227 (288)
T 3kfa_A 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----VYE---LLEK--------- 227 (288)
T ss_dssp SSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG----HHH---HHHT---------
T ss_pred CccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----HHH---HHhc---------
Confidence 54444445567889999999998999999999999999999999 999986432211 111 1111
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
......+...+.++.+++.+||..||++|||+.++++.|+..
T Consensus 228 -~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 228 -DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp -TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -cCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 111111222346799999999999999999999999999873
No 79
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.1e-41 Score=343.94 Aligned_cols=266 Identities=20% Similarity=0.258 Sum_probs=202.8
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-chHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
++|.+.+.||+|+||+||+|... +|+.||||+++...... ....+.+|+.++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888999999999999999975 68999999997654332 23578899999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++ ++.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9975 555555442 34699999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCceeeccccccccccccccccCC-CCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhc--Ccccccc
Q 006968 459 DSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQE--GKLSQMV 535 (623)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 535 (623)
.. ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.|+........ ......+..... .......
T Consensus 155 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~ 231 (292)
T 3o0g_A 155 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKRIFRLLGTPTEEQWPSMT 231 (292)
T ss_dssp CS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH--HHHHHHHHHCCCCTTTCTTGG
T ss_pred cc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH--HHHHHHHHhCCCChhhhhhhc
Confidence 22 233456899999999997765 79999999999999999999988643221110 111111111000 0000000
Q ss_pred ---c---------cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 536 ---D---------KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 536 ---~---------~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
+ .............++.+++.+||+.||++|||+.|++++-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 284 (292)
T 3o0g_A 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHP 284 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCc
Confidence 0 0000011123346789999999999999999999998853
No 80
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=357.68 Aligned_cols=254 Identities=20% Similarity=0.282 Sum_probs=205.5
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.++|.+.+.||+|+||.||+|... +|+.||+|+++..... .....+.+|+++++.++||||+++++++.+++..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 467999999999999999999864 6899999999765432 23456899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC---CCCcEEEeecccccc
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKL 454 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~kl~Dfgla~~ 454 (623)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++ .++.+||+|||++..
T Consensus 90 E~~~gg~L~~~i~~~----~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 90 DLVTGGELFEDIVAR----EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp CCCBCCBHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EeCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 999999999998763 4699999999999999999999999 999999999999998 467899999999987
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... .+....... +... .
T Consensus 163 ~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-------~~~~~~i~~-~~~~-~ 232 (444)
T 3soa_A 163 VEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-------HRLYQQIKA-GAYD-F 232 (444)
T ss_dssp CCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHH-TCCC-C
T ss_pred ecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHHh-CCCC-C
Confidence 654332 23345699999999999999999999999999999999999999964321 111111111 1110 0
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
..+ .....+.++.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~-----~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 PSP-----EWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp CTT-----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred Ccc-----ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000 011224678999999999999999999999985
No 81
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=4e-42 Score=350.81 Aligned_cols=262 Identities=26% Similarity=0.402 Sum_probs=207.1
Q ss_pred cCCCcCCceeccCCeEEEEEEe-----CCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecC--Cce
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE--NER 373 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~ 373 (623)
..|++.+.||+|+||.||+|.+ .+++.||||+++..........+.+|+++++.++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4578889999999999999984 368999999998665555567899999999999999999999999876 668
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 101 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 9999999999999999664 34699999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc--eeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCccccc--------ccccchHHHHH
Q 006968 454 LLDHRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAA--------NQRGVMLDWVK 523 (623)
Q Consensus 454 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~--------~~~~~~~~~~~ 523 (623)
........ ......||..|+|||.+.+..++.++||||||+++|||++|+.|+...... ...........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 77654332 223455888999999999999999999999999999999999986432110 00000001111
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 524 KLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
... .+ .....+...+.++.+++.+||+.||.+|||+.++++.|+.
T Consensus 255 ~~~-~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 299 (302)
T 4e5w_A 255 TLK-EG---------KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299 (302)
T ss_dssp HHH-TT---------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHh-cc---------CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 111 11 1111223344789999999999999999999999999975
No 82
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=7.7e-41 Score=350.14 Aligned_cols=253 Identities=21% Similarity=0.305 Sum_probs=205.7
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.++|.+.+.||+|+||.||+|... +|..||+|+++..... .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999875 6899999999765432 23356889999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC---CcEEEeecccccc
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED---FEAVVGDFGLAKL 454 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~kl~Dfgla~~ 454 (623)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||++..
T Consensus 108 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 108 DLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp CCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 99999999988865 34689999999999999999999999 99999999999999865 4599999999987
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ......... +...
T Consensus 181 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-------~~~~~~i~~-~~~~-- 248 (362)
T 2bdw_A 181 VNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-------HRLYAQIKA-GAYD-- 248 (362)
T ss_dssp CTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH-TCCC--
T ss_pred ecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHh-CCCC--
Confidence 65332 23345699999999999998999999999999999999999999964321 111111111 1110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.........+.++.+++.+||..||++|||+.|++++
T Consensus 249 ----~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 ----YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp ----CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ----CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000001224678999999999999999999999876
No 83
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=353.52 Aligned_cols=251 Identities=27% Similarity=0.348 Sum_probs=202.4
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc--ccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCceEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLL 375 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 375 (623)
.++|.+.+.||+|+||.||+|... +|+.||||++++... ......+.+|..++..+ +||||+++++++...+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 478999999999999999999975 589999999976432 22344678899999988 69999999999999999999
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
||||+++|+|..++... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 102 v~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS----RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 99999999999999764 3699999999999999999999999 9999999999999999999999999999854
Q ss_pred CCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccc
Q 006968 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMV 535 (623)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (623)
... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... +....+.... .
T Consensus 175 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-------~~~~~i~~~~-~---- 241 (353)
T 3txo_A 175 ICN-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-------DLFEAILNDE-V---- 241 (353)
T ss_dssp CC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCC-C----
T ss_pred ccC-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-------HHHHHHHcCC-C----
Confidence 322 22344567999999999999989999999999999999999999999743221 1112221111 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHHh
Q 006968 536 DKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKM------SEVLKML 576 (623)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~------~evl~~L 576 (623)
.++.....++.+++.+||..||++||++ .|++++-
T Consensus 242 ------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp 282 (353)
T 3txo_A 242 ------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHP 282 (353)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSG
T ss_pred ------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCC
Confidence 1122234678999999999999999998 7787753
No 84
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=348.46 Aligned_cols=246 Identities=26% Similarity=0.300 Sum_probs=195.2
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc-cchHHHHHHHHHHhhc-CCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 377 (623)
++|+..+.||+|+||+||+|... +|+.||||++...... .....+..|+..+..+ +||||+++++++...+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999986 7999999998654322 2233456666666555 8999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+ +++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 137 e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp ECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred ecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 999 77999988765 34699999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
.. ......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... | ... ..+... +
T Consensus 210 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---------~-~~~-~~~~~~----~ 271 (311)
T 3p1a_A 210 AG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---------W-QQL-RQGYLP----P 271 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---------H-HHH-TTTCCC----H
T ss_pred CC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---------H-HHH-hccCCC----c
Confidence 32 2334569999999999875 789999999999999999999777642211 1 111 111111 1
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.+. ...+.++.+++.+||+.||++|||+.|++++
T Consensus 272 ~~~----~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 272 EFT----AGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccc----cCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 111 1123678999999999999999999999875
No 85
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.9e-41 Score=341.95 Aligned_cols=259 Identities=17% Similarity=0.201 Sum_probs=208.4
Q ss_pred cCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCceEEEEe
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e 378 (623)
++|.+.+.||+|+||.||+|.. .+|+.||||+++... ....+.+|+.++..+ +|+|++++++++......++|||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC---ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 5788999999999999999996 479999999986533 234688999999999 79999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCc-----EEEeeccccc
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE-----AVVGDFGLAK 453 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-----~kl~Dfgla~ 453 (623)
|+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++
T Consensus 87 ~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 87 LL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred ec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99 99999999864 34599999999999999999999999 9999999999999987776 9999999998
Q ss_pred ccCCCCCc------eeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhh
Q 006968 454 LLDHRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQ 527 (623)
Q Consensus 454 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 527 (623)
........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||............ ..+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~ 238 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKY-ERIGEKKQ 238 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHH-HHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHH-HHHHhhcc
Confidence 76543321 234456999999999999999999999999999999999999999753321111111 11111111
Q ss_pred cCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 528 EGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
...... +.. ..+.++.+++.+||+.||++|||+.+|++.|++.
T Consensus 239 ~~~~~~-----~~~----~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 239 STPLRE-----LCA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp HSCHHH-----HTT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred CccHHH-----HHh----hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 111111 111 1236789999999999999999999999999873
No 86
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-41 Score=347.80 Aligned_cols=248 Identities=26% Similarity=0.326 Sum_probs=206.8
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc--ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
++|.+.+.||+|+||.||+|... +|+.||+|++++... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56888999999999999999975 699999999975432 223456889999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 86 DYIEGGELFSLLRKS----QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp CCCCSCBHHHHHHHT----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred eCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 999999999999763 4689999999999999999999999 999999999999999999999999999987543
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........... .
T Consensus 159 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~i~~~~-~------ 220 (318)
T 1fot_A 159 V----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-------MKTYEKILNAE-L------ 220 (318)
T ss_dssp C----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHCC-C------
T ss_pred c----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCC-C------
Confidence 2 3345699999999999999999999999999999999999999964322 11112221111 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhh
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRP-----KMSEVLKMLE 577 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~L~ 577 (623)
.++.....++.+++.+|+..||++|| ++.+++++-.
T Consensus 221 ----~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~ 261 (318)
T 1fot_A 221 ----RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261 (318)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred ----CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCcc
Confidence 11222346789999999999999999 8999987643
No 87
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4e-42 Score=364.76 Aligned_cols=265 Identities=22% Similarity=0.248 Sum_probs=211.0
Q ss_pred CHHHHHHHhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc--cchHHHHHHHHHHhhcCCCceeeeeeeee
Q 006968 292 TFKELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA--GGEVQFQTEVETISLAVHRNLLRLCGFCS 368 (623)
Q Consensus 292 ~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~ 368 (623)
.+.+.+...++|++.+.||+|+||.||+|... +|+.||||++++.... .....+.+|..++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34455556788999999999999999999975 6999999999753321 22345889999999999999999999999
Q ss_pred cCCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEee
Q 006968 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGD 448 (623)
Q Consensus 369 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~D 448 (623)
+.+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEee
Confidence 999999999999999999999864 23689999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCceeeccccccccccccccc-------cCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHH
Q 006968 449 FGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS-------TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDW 521 (623)
Q Consensus 449 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~ 521 (623)
||+++.............+||+.|+|||++. ...++.++|||||||++|||++|+.||....... .
T Consensus 206 FGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-------~ 278 (412)
T 2vd5_A 206 FGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE-------T 278 (412)
T ss_dssp CTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-------H
T ss_pred chhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH-------H
Confidence 9999877654443344567999999999997 3578999999999999999999999997433211 1
Q ss_pred HHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHHh
Q 006968 522 VKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHR---PKMSEVLKML 576 (623)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R---Ps~~evl~~L 576 (623)
...+..... ....+.. ....+.++.+++.+||. +|++| |++.|++++-
T Consensus 279 ~~~i~~~~~--~~~~p~~----~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hp 329 (412)
T 2vd5_A 279 YGKIVHYKE--HLSLPLV----DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHP 329 (412)
T ss_dssp HHHHHTHHH--HCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSG
T ss_pred HHHHHhccc--CcCCCcc----ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCC
Confidence 111111000 0000101 11224678999999999 99998 6999998764
No 88
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.5e-42 Score=356.41 Aligned_cols=261 Identities=26% Similarity=0.374 Sum_probs=210.5
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeCC------CcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeeeeeeeecCC
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTEN 371 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 371 (623)
..++|.+.+.||+|+||.||+|.... +..||+|.++..........+.+|+.+++.+ +||||+++++++...+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 45789999999999999999998642 3489999997665444556799999999999 8999999999999999
Q ss_pred ceEEEEecccCCChhhhhhhccC----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC
Q 006968 372 ERLLVYPYMPNGSVASRLRDHIH----------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED 441 (623)
Q Consensus 372 ~~~lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~ 441 (623)
..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCC
Confidence 99999999999999999975321 134589999999999999999999999 99999999999999999
Q ss_pred CcEEEeecccccccCCCCCc-eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchH
Q 006968 442 FEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVML 519 (623)
Q Consensus 442 ~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~ 519 (623)
+.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||+| |..||.......
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------ 274 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS------ 274 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH------
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH------
Confidence 99999999999865433322 2233457889999999998999999999999999999999 888986422111
Q ss_pred HHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 520 DWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
........+. ....+...+..+.+++.+||+.||.+|||+.|++++|++
T Consensus 275 -~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 323 (333)
T 2i1m_A 275 -KFYKLVKDGY---------QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323 (333)
T ss_dssp -HHHHHHHHTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -HHHHHHhcCC---------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHH
Confidence 1111111111 001112224678999999999999999999999999986
No 89
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=7e-42 Score=351.94 Aligned_cols=266 Identities=26% Similarity=0.382 Sum_probs=207.3
Q ss_pred CCcCCceeccCCeEEEEEEeC-----CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecC--CceEE
Q 006968 303 FSAKNILGRGGFGIVYKGCFS-----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE--NERLL 375 (623)
Q Consensus 303 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~l 375 (623)
|.+.+.||+|+||.||++.+. +++.||||+++..........+.+|++++++++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999998753 58899999998665444456799999999999999999999999874 56899
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
||||+++|+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 113 v~e~~~~~~L~~~l~~~-----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH-----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGGS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 99999999999999753 489999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCc--eeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 456 DHRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 456 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
...... ......+|..|+|||.+.+..++.++||||||+++|||++|+.||......... ...+...........+
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE--LIGIAQGQMTVLRLTE 262 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH--HHCSCCHHHHHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhh--hhcccccchhHHHHHH
Confidence 654332 223445888999999999989999999999999999999999998643211000 0000000000000111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.+........+...+.++.+++.+||+.||++|||+.|+++.|+.
T Consensus 263 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 307 (318)
T 3lxp_A 263 LLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT 307 (318)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 111111122233345789999999999999999999999999976
No 90
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.9e-41 Score=347.53 Aligned_cols=254 Identities=22% Similarity=0.292 Sum_probs=195.5
Q ss_pred cCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEeccccccc--chHHHHHHHHHHhhcCCCceeeeeeeeecCCce----
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAG--GEVQFQTEVETISLAVHRNLLRLCGFCSTENER---- 373 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~---- 373 (623)
++|.+.+.||+|+||.||+|.. .+++.||||+++...... ....+.+|+.++++++||||+++++++......
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 6788999999999999999996 478999999997653322 234689999999999999999999998765443
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 92 ~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEECCCEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred EEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 9999999999999999763 3689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc--eeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcc
Q 006968 454 LLDHRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKL 531 (623)
Q Consensus 454 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (623)
........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ............
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~ 237 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV-------SVAYQHVREDPI 237 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHCCCC
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCCCC
Confidence 76543222 223456899999999999999999999999999999999999999643221 111111111111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 532 SQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.. ..... ..+.++.+++.+||+.||++||++.+++.+
T Consensus 238 ~~---~~~~~----~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 238 PP---SARHE----GLSADLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp CH---HHHST----TCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred Cc---ccccC----CCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 10 00011 123678999999999999999987777654
No 91
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-41 Score=343.72 Aligned_cols=254 Identities=24% Similarity=0.364 Sum_probs=207.1
Q ss_pred cCCCcCC-ceeccCCeEEEEEEeC---CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEE
Q 006968 301 SNFSAKN-ILGRGGFGIVYKGCFS---DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (623)
Q Consensus 301 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 376 (623)
++|.+.+ .||+|+||.||+|.+. ++..||||+++..........+.+|+++++.++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4455555 8999999999999863 57889999998754444556799999999999999999999999 45678999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccC
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~ 456 (623)
|||+++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EECCTTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEeCCCCCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 9999999999998753 34699999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCce--eeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 457 HRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 457 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
...... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... +....... +.
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-------~~~~~i~~-~~--- 230 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-------EVMAFIEQ-GK--- 230 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-------HHHHHHHT-TC---
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-------HHHHHHhc-CC---
Confidence 433322 223346899999999988889999999999999999999 99998643221 11111111 11
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....+...+.++.+++.+||+.+|++||++.+++++|+.
T Consensus 231 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 269 (287)
T 1u59_A 231 ------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 269 (287)
T ss_dssp ------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred ------cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 011222334789999999999999999999999999987
No 92
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.8e-41 Score=349.54 Aligned_cols=260 Identities=26% Similarity=0.359 Sum_probs=194.1
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeCC-C---cEEEEEEeccccc-ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCce
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFSD-G---ALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENER 373 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 373 (623)
..++|.+.+.||+|+||.||+|.... + ..||||+++.... ......+.+|++++++++||||+++++++...+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34679999999999999999998754 2 2799999976432 23355799999999999999999999999876655
Q ss_pred ------EEEEecccCCChhhhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEE
Q 006968 374 ------LLVYPYMPNGSVASRLRDHIH--GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV 445 (623)
Q Consensus 374 ------~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 445 (623)
++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEE
Confidence 999999999999999976432 223689999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCCc-eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHH
Q 006968 446 VGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVK 523 (623)
Q Consensus 446 l~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 523 (623)
|+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ...
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-------~~~ 250 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE-------IYN 250 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-------HHH
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH-------HHH
Confidence 9999999876543322 2223447889999999999999999999999999999999 899986432211 111
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 524 KLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....... ...+...+.++.+++.+||+.||++|||+.++++.|++
T Consensus 251 ~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~ 295 (323)
T 3qup_A 251 YLIGGNR----------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELEN 295 (323)
T ss_dssp HHHTTCC----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHhcCCC----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1111111 11122234679999999999999999999999999987
No 93
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-41 Score=351.54 Aligned_cols=256 Identities=27% Similarity=0.428 Sum_probs=202.2
Q ss_pred cCCCcCCceeccCCeEEEEEEeCC-----CcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSD-----GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 375 (623)
++|...+.||+|+||.||+|.... +..||||+++..........+.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456778999999999999998642 346999999765544445679999999999999999999999999999999
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 124 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 99999999999999763 34699999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc--eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCccc
Q 006968 456 DHRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLS 532 (623)
Q Consensus 456 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (623)
...... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... .+...........
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-------~~~~~~~~~~~~~- 269 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-------HEVMKAINDGFRL- 269 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTTCCC-
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-------HHHHHHHHCCCcC-
Confidence 543221 1222346789999999998999999999999999999999 9999863221 1111222111111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 533 QMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
..+...+.++.+++.+||+.+|++||++.+++++|+..
T Consensus 270 ---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 270 ---------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp ---------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ---------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11222346789999999999999999999999999873
No 94
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.6e-41 Score=340.30 Aligned_cols=250 Identities=22% Similarity=0.349 Sum_probs=203.7
Q ss_pred cCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecC--CceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTE--NERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 377 (623)
++|.+.+.||+|+||.||+|.+ +++.||||+++..... .....|.+|+.++++++||||+++++++... +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 5688899999999999999998 4899999999765432 2345799999999999999999999999877 7789999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK--IIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
||+++|+|.+++... ....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.++|+|||++...
T Consensus 89 e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp ECCTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred cccCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 999999999999763 233689999999999999999999998 7 999999999999999999999999987643
Q ss_pred CCCCCceeeccccccccccccccccCCCCC---ccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccc
Q 006968 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSE---KTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLS 532 (623)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (623)
.. ....||+.|+|||.+.+..++. ++||||||+++|||++|+.||...... +........+.
T Consensus 164 ~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~-- 228 (271)
T 3kmu_A 164 QS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM-------EIGMKVALEGL-- 228 (271)
T ss_dssp SC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH-------HHHHHHHHSCC--
T ss_pred cc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH-------HHHHHHHhcCC--
Confidence 32 2235899999999998765544 799999999999999999999643221 11111111111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 533 QMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....+...+.++.+++.+||+.||++|||+.++++.|+.
T Consensus 229 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~ 267 (271)
T 3kmu_A 229 -------RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEK 267 (271)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111222234679999999999999999999999999986
No 95
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=7.9e-42 Score=351.99 Aligned_cols=267 Identities=24% Similarity=0.384 Sum_probs=214.5
Q ss_pred HHHHHhcCCCcCCceeccCCeEEEEEEeC------CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeee
Q 006968 295 ELRAATSNFSAKNILGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS 368 (623)
Q Consensus 295 ~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~ 368 (623)
++....++|.+.+.||+|+||.||+|... ++..||||.++..........+.+|+.+++.++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 33445678999999999999999999864 378899999976554445567999999999999999999999999
Q ss_pred cCCceEEEEecccCCChhhhhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC
Q 006968 369 TENERLLVYPYMPNGSVASRLRDHI------HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF 442 (623)
Q Consensus 369 ~~~~~~lv~e~~~~gsL~~~l~~~~------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 442 (623)
..+..++||||+++|+|.+++.... .....+++..+..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCC
Confidence 9999999999999999999997532 1124579999999999999999999999 999999999999999999
Q ss_pred cEEEeecccccccCCCCCc-eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHH
Q 006968 443 EAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLD 520 (623)
Q Consensus 443 ~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~ 520 (623)
.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... .+
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~ 248 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-------EQ 248 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-------HH
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-------HH
Confidence 9999999999865432221 1223346889999999999999999999999999999999 8888864321 11
Q ss_pred HHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCC
Q 006968 521 WVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGL 581 (623)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~ 581 (623)
....... +... ..+...+..+.+++.+||+.||++|||+.|++++|++...
T Consensus 249 ~~~~~~~-~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 249 VLRFVME-GGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHHHHHT-TCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHHHHc-CCcC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1122111 1111 1112234678999999999999999999999999988533
No 96
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.6e-41 Score=342.32 Aligned_cols=254 Identities=28% Similarity=0.424 Sum_probs=208.4
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
.++|.+.+.||+|+||.||+|...++..||||.++... .....+.+|+++++.++||||+++++++. .+..++||||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 88 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEY 88 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEec
Confidence 35788899999999999999999888899999997543 23567999999999999999999999986 4568999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 459 (623)
+++++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 89 ~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T 1qpc_A 89 MENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163 (279)
T ss_dssp CTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred CCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence 99999999987531 12589999999999999999999999 99999999999999999999999999998765443
Q ss_pred CceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCccccccccc
Q 006968 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKD 538 (623)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (623)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+..........
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~~~~~~~~~~~-------- 228 (279)
T 1qpc_A 164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-------PEVIQNLERGYR-------- 228 (279)
T ss_dssp EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHHTTCC--------
T ss_pred cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH-------HHHHHHHhcccC--------
Confidence 333334457889999999988889999999999999999999 8999864321 111122111110
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 539 LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
...+...+.++.+++.+|++.||++|||+.++++.|++
T Consensus 229 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 266 (279)
T 1qpc_A 229 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266 (279)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 01112234678999999999999999999999999987
No 97
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=8.9e-42 Score=350.44 Aligned_cols=268 Identities=25% Similarity=0.357 Sum_probs=213.9
Q ss_pred CHHHHHHHhcCCCcCCceeccCCeEEEEEEe------CCCcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeeee
Q 006968 292 TFKELRAATSNFSAKNILGRGGFGIVYKGCF------SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLC 364 (623)
Q Consensus 292 ~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~ 364 (623)
...++....++|.+.+.||+|+||.||+|.. .+++.||||+++..........+.+|+.++.++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3444445567899999999999999999974 357899999998655444456799999999999 799999999
Q ss_pred eeeecCC-ceEEEEecccCCChhhhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCC
Q 006968 365 GFCSTEN-ERLLVYPYMPNGSVASRLRDHIHG------------RPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDV 431 (623)
Q Consensus 365 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dl 431 (623)
+++...+ ..++||||+++|+|.+++...... ...+++..+..++.|++.||.|||+. +|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccC
Confidence 9987654 489999999999999999864321 12389999999999999999999999 9999999
Q ss_pred CCCCeEECCCCcEEEeecccccccCCCCCc-eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcc
Q 006968 432 KAANILLDEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFG 509 (623)
Q Consensus 432 k~~NIll~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~ 509 (623)
||+||+++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 999999999999999999999876543332 2334557899999999999999999999999999999998 99998643
Q ss_pred cccccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 510 RAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
... ............ . ..+...+.++.+++.+||+.||.+|||+.|++++|+.
T Consensus 255 ~~~------~~~~~~~~~~~~------~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 307 (316)
T 2xir_A 255 KID------EEFCRRLKEGTR------M----RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307 (316)
T ss_dssp CCS------HHHHHHHHHTCC------C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred chh------HHHHHHhccCcc------C----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 211 111111111111 0 1111234678999999999999999999999999987
No 98
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=6.9e-41 Score=348.01 Aligned_cols=257 Identities=23% Similarity=0.298 Sum_probs=204.9
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc--chHHHHHHHHHHhhc-CCCceeeeeeeeecCCceEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG--GEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLV 376 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 376 (623)
++|.+.+.||+|+||.||+|... +++.||+|++++..... ....+.+|..++.++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56888999999999999999975 58999999997654332 234578899999887 899999999999999999999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccC
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~ 456 (623)
|||+++|+|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 9999999999999763 3689999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCccccccc-ccchHHHHHHHhhcCcccccc
Q 006968 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ-RGVMLDWVKKLHQEGKLSQMV 535 (623)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 535 (623)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||........ .......+.........
T Consensus 162 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~---- 236 (345)
T 3a8x_A 162 RPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---- 236 (345)
T ss_dssp CTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC----
T ss_pred CCC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC----
Confidence 222 234456799999999999999999999999999999999999999964221110 00111111111111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 006968 536 DKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKM------SEVLKM 575 (623)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~------~evl~~ 575 (623)
.++...+.++.+++.+||..||++||++ .|++++
T Consensus 237 ------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 237 ------RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred ------CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 1222234678999999999999999995 677664
No 99
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-41 Score=348.78 Aligned_cols=255 Identities=25% Similarity=0.426 Sum_probs=201.1
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCc----EEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGA----LVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 375 (623)
.+|.+.+.||+|+||.||+|.+. +++ .||+|.++..........+.+|+.+++.++||||+++++++... ..++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-CceE
Confidence 57889999999999999999864 344 46888886655555677899999999999999999999999865 4889
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
|+||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 94 v~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred EEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 99999999999999864 34699999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc-eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 456 DHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 456 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
...... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... ... .. ..+.
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----~~~---~~-~~~~--- 236 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----ISS---IL-EKGE--- 236 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHH---HH-HTTC---
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH----HHH---HH-HcCC---
Confidence 543222 2233447889999999999999999999999999999999 999997433211 111 11 1111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
....+...+.++.+++.+||..||.+|||+.|+++.|+..
T Consensus 237 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 276 (327)
T 3lzb_A 237 ------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp ------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1111222346789999999999999999999999999874
No 100
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=7.5e-42 Score=358.54 Aligned_cols=266 Identities=16% Similarity=0.180 Sum_probs=203.4
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCC------CcEEEEEEeccccccc----------chHHHHHHHHHHhhcCCCceeee
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAG----------GEVQFQTEVETISLAVHRNLLRL 363 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~----------~~~~~~~e~~~l~~l~H~niv~l 363 (623)
.++|.+.+.||+|+||.||+|.+.+ ++.||||++....... ....+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578999999999999999998754 4789999986543110 01124456666778889999999
Q ss_pred eeeeecC----CceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC
Q 006968 364 CGFCSTE----NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD 439 (623)
Q Consensus 364 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~ 439 (623)
++++... ...++||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 9998764 4479999999 99999999763 34699999999999999999999999 999999999999999
Q ss_pred --CCCcEEEeecccccccCCCCCc------eeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccc
Q 006968 440 --EDFEAVVGDFGLAKLLDHRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRA 511 (623)
Q Consensus 440 --~~~~~kl~Dfgla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~ 511 (623)
.++.+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 8899999999999876432211 11334599999999999999999999999999999999999999974221
Q ss_pred cccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 512 ANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
. .....+..... ...+..++++.+.. ...+.++.+++..||+.+|++||++.+|++.|++.
T Consensus 267 ~---~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~ 327 (364)
T 3op5_A 267 D---PKYVRDSKIRY-RENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQG 327 (364)
T ss_dssp C---HHHHHHHHHHH-HHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHh-hhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 1 11111111111 11223333332211 11236789999999999999999999999998874
No 101
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=350.15 Aligned_cols=251 Identities=24% Similarity=0.304 Sum_probs=205.0
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc--ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
++|.+.+.||+|+||.||+|... +++.||+|+++.... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56888999999999999999875 588999999975432 233457889999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++|+|..++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 95 e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999875 34699999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCceeecccccccccccccccc---CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
.. ......||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ............
T Consensus 168 ~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~----~~~~~~~~~~~~----- 236 (384)
T 4fr4_A 168 ET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS----SKEIVHTFETTV----- 236 (384)
T ss_dssp TC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC----HHHHHHHHHHCC-----
T ss_pred CC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc----HHHHHHHHhhcc-----
Confidence 32 3345679999999999964 458999999999999999999999996432211 111111111110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPK-MSEVLKM 575 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-~~evl~~ 575 (623)
..++...+.++.+++.+||..||++||+ +.++.++
T Consensus 237 ------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 237 ------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp ------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred ------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 1122233467899999999999999998 7777664
No 102
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.3e-41 Score=348.20 Aligned_cols=263 Identities=23% Similarity=0.232 Sum_probs=203.3
Q ss_pred HHHhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc----ccchHHHHHHHHHHhhcCCCceeeeeeeeecCC
Q 006968 297 RAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI----AGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN 371 (623)
Q Consensus 297 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 371 (623)
....++|.+.+.||+|+||.||+|... ++..||+|+++.... ......+.+|++++++++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 445678999999999999999999874 688999999975431 234457999999999999999999999999999
Q ss_pred ceEEEEecccCCChhhhhhhccCC------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 006968 372 ERLLVYPYMPNGSVASRLRDHIHG------------------------------------RPALDWARRKRIALGTARGL 415 (623)
Q Consensus 372 ~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~ia~~L 415 (623)
..++||||+++|+|.+++...... ...+++..++.++.|++.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999998632111 11246778889999999999
Q ss_pred HHHHhCCCCCeEecCCCCCCeEECCCC--cEEEeecccccccCCCC---Cceeecccccccccccccccc--CCCCCccc
Q 006968 416 LYLHEQCDPKIIHRDVKAANILLDEDF--EAVVGDFGLAKLLDHRD---SHVTTAVRGTVGHIAPEYLST--GQSSEKTD 488 (623)
Q Consensus 416 ~~LH~~~~~~ivH~Dlk~~NIll~~~~--~~kl~Dfgla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~--~~~~~~~D 488 (623)
+|||+. +|+||||||+||+++.++ .+||+|||+++.+.... ........||+.|+|||.+.+ ..++.++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999999 999999999999998776 89999999998654322 112344569999999999865 67899999
Q ss_pred hhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 006968 489 VFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPK 568 (623)
Q Consensus 489 v~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs 568 (623)
|||||+++|||++|+.||...... +............ ..+. ....+.++.+++.+||..||++|||
T Consensus 259 iwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVNDA-------DTISQVLNKKLCF--ENPN-----YNVLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCCT--TSGG-----GGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCChH-------HHHHHHHhccccc--CCcc-----cccCCHHHHHHHHHHcCCChhHCCC
Confidence 999999999999999999643221 1112221111100 0000 0112367899999999999999999
Q ss_pred HHHHHHHh
Q 006968 569 MSEVLKML 576 (623)
Q Consensus 569 ~~evl~~L 576 (623)
+.|++++-
T Consensus 325 ~~~~l~hp 332 (345)
T 3hko_A 325 AMRALQHP 332 (345)
T ss_dssp HHHHHHSH
T ss_pred HHHHhcCh
Confidence 99999853
No 103
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-40 Score=349.55 Aligned_cols=254 Identities=20% Similarity=0.273 Sum_probs=207.2
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
.++|.+.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+++++.++||||+++++++...+..++|||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc-hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 357999999999999999999875 68999999987543 2234578999999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC--CCcEEEeecccccccC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE--DFEAVVGDFGLAKLLD 456 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~--~~~~kl~Dfgla~~~~ 456 (623)
|+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 129 ~~~gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 129 FLSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp CCCCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred cCCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 99999999988753 34699999999999999999999999 9999999999999974 5779999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.+........ ..+
T Consensus 203 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-------~~~~~~i~~~~~---~~~ 270 (387)
T 1kob_A 203 PDE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-------LETLQNVKRCDW---EFD 270 (387)
T ss_dssp TTS--CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHHCCC---CCC
T ss_pred CCc--ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCC---CCC
Confidence 432 23344699999999999999999999999999999999999999974322 111222211110 011
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
... ....+.++.+++.+||..||++|||+.|++++-
T Consensus 271 ~~~----~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp 306 (387)
T 1kob_A 271 EDA----FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306 (387)
T ss_dssp SST----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred ccc----cccCCHHHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence 111 112346789999999999999999999999863
No 104
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=6e-41 Score=345.93 Aligned_cols=251 Identities=22% Similarity=0.324 Sum_probs=182.3
Q ss_pred CCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcC-CCceeeeeeeeecCCceEEEEecccCC
Q 006968 306 KNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-HRNLLRLCGFCSTENERLLVYPYMPNG 383 (623)
Q Consensus 306 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~g 383 (623)
.+.||+|+||.||+|... +|+.||||+++.. ....+.+|+.++..+. ||||+++++++.+.+..++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 478999999999999975 6899999999653 3456889999999997 999999999999999999999999999
Q ss_pred ChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC---cEEEeecccccccCCCCC
Q 006968 384 SVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF---EAVVGDFGLAKLLDHRDS 460 (623)
Q Consensus 384 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~kl~Dfgla~~~~~~~~ 460 (623)
+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++.......
T Consensus 92 ~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 92 ELFERIKKK----KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp BHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred cHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 999999763 4699999999999999999999999 999999999999997665 899999999986654322
Q ss_pred ceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccccccC
Q 006968 461 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLK 540 (623)
Q Consensus 461 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (623)
......||+.|+|||++.+..++.++||||||+++|||++|+.||.............+....... +... ..
T Consensus 165 -~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~-~~~~------~~ 236 (325)
T 3kn6_A 165 -PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK-GDFS------FE 236 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTT-TCCC------CC
T ss_pred -cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHc-CCCC------CC
Confidence 233456899999999999999999999999999999999999999754332222222222222211 1110 00
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 541 GNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 541 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.......+.++.+++.+||..||++|||+.|++++
T Consensus 237 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 237 GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 00001234678999999999999999999999765
No 105
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.2e-41 Score=355.51 Aligned_cols=270 Identities=17% Similarity=0.230 Sum_probs=214.5
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCC--ceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN--ERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv~ 377 (623)
.+|.+.+.||+|+||.||+|... +|+.||||+++..........+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 56888999999999999999976 589999999986655555667899999999999999999999997655 679999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE----CCCCcEEEeeccccc
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL----DEDFEAVVGDFGLAK 453 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~kl~Dfgla~ 453 (623)
||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 89 e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp CCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred ecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999976432 23499999999999999999999999 99999999999999 788889999999998
Q ss_pred ccCCCCCceeecccccccccccccccc--------CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHH
Q 006968 454 LLDHRDSHVTTAVRGTVGHIAPEYLST--------GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKL 525 (623)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 525 (623)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .+.+...
T Consensus 165 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~---~~~~~~~ 239 (396)
T 4eut_A 165 ELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN---KEVMYKI 239 (396)
T ss_dssp ECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC---HHHHHHH
T ss_pred EccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch---HHHHHHH
Confidence 765432 2234569999999999865 56788999999999999999999999643222111 1222222
Q ss_pred hhcCc---cccc---------cc--cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 526 HQEGK---LSQM---------VD--KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 526 ~~~~~---~~~~---------~~--~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
..... .... +. ......+.......+.+++.+||..||++|||+.|+++.+++.
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp HHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred hcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence 22111 0000 00 0112234577888999999999999999999999999998773
No 106
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.7e-41 Score=352.11 Aligned_cols=252 Identities=25% Similarity=0.357 Sum_probs=206.0
Q ss_pred HHhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc--ccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCce
Q 006968 298 AATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENER 373 (623)
Q Consensus 298 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~ 373 (623)
...++|.+.+.||+|+||.||+|... +|+.||||+++.... ......+..|..++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 35678999999999999999999975 689999999976432 23345678899999876 899999999999999999
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 94 ~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 9999999999999999763 3689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 454 LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... +....+....
T Consensus 167 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-------~~~~~i~~~~---- 234 (345)
T 1xjd_A 167 ENMLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-------ELFHSIRMDN---- 234 (345)
T ss_dssp CCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCC----
T ss_pred hcccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH-------HHHHHHHhCC----
Confidence 643222 2244567999999999999999999999999999999999999999643221 1112211111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHH-HHHHH
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMS-EVLKM 575 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~-evl~~ 575 (623)
. .++...+.++.+++.+||..||++||++. +++++
T Consensus 235 ---~----~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 235 ---P----FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp ---C----CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred ---C----CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 1 11222346789999999999999999997 66553
No 107
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-41 Score=376.67 Aligned_cols=252 Identities=24% Similarity=0.362 Sum_probs=202.1
Q ss_pred CCcCC-ceeccCCeEEEEEEeC---CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 303 FSAKN-ILGRGGFGIVYKGCFS---DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 303 ~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
+.+.+ .||+|+||.||+|.+. ++..||||+++.........+|.+|++++++++||||+++++++.. +..++|||
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E 415 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVME 415 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEE
Confidence 33334 7999999999999864 4678999999876545556789999999999999999999999976 56899999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 416 ~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~ 489 (613)
T 2ozo_A 416 MAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD 489 (613)
T ss_dssp CCTTCBHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred eCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence 99999999999753 45699999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcee--eccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCcccccc
Q 006968 459 DSHVT--TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMV 535 (623)
Q Consensus 459 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (623)
..... ....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... +....+.. +.
T Consensus 490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-------~~~~~i~~-~~----- 556 (613)
T 2ozo_A 490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-------EVMAFIEQ-GK----- 556 (613)
T ss_dssp ------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH-------HHHHHHHT-TC-----
T ss_pred CceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH-------HHHHHHHc-CC-----
Confidence 32222 22335689999999999999999999999999999998 99999643221 11111111 11
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 536 DKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....+..++.++.+++.+||..+|++||++.+|++.|+.
T Consensus 557 ----~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 595 (613)
T 2ozo_A 557 ----RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 595 (613)
T ss_dssp ----CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred ----CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 111223345789999999999999999999999999986
No 108
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-41 Score=355.69 Aligned_cols=254 Identities=31% Similarity=0.431 Sum_probs=193.9
Q ss_pred CCCcCCceeccCCeEEEEEEeC--C--CcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeec-CCceEEE
Q 006968 302 NFSAKNILGRGGFGIVYKGCFS--D--GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCST-ENERLLV 376 (623)
Q Consensus 302 ~~~~~~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~~lv 376 (623)
.|.+.+.||+|+||.||+|.+. + +..||||.++.........+|.+|+.++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4666789999999999999863 2 246899999765544556689999999999999999999998754 5678999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccC
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~ 456 (623)
|||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 170 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 9999999999999753 34689999999999999999999999 99999999999999999999999999998664
Q ss_pred CCCCc---eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCccc
Q 006968 457 HRDSH---VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLS 532 (623)
Q Consensus 457 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (623)
..... ......+|+.|+|||.+.+..++.++||||||+++|||+| |.+||...... .... ... .+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~----~~~~---~~~-~~~~- 314 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DITV---YLL-QGRR- 314 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS----CHHH---HHH-TTCC-
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH----HHHH---HHH-cCCC-
Confidence 33221 1233457889999999999999999999999999999999 56666532211 1111 111 1110
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 533 QMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
...+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 315 --------~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~ 352 (373)
T 3c1x_A 315 --------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 352 (373)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 01112234678999999999999999999999999987
No 109
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.6e-41 Score=350.72 Aligned_cols=248 Identities=22% Similarity=0.272 Sum_probs=207.4
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc--ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
++|.+.+.||+|+||.||+|... +|+.||||+++.... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999975 689999999975432 223456889999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++|+|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 999999999999864 3589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+.. +..
T Consensus 194 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~-~~~------ 255 (350)
T 1rdq_E 194 R----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-------IQIYEKIVS-GKV------ 255 (350)
T ss_dssp C----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH-CCC------
T ss_pred C----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-------HHHHHHHHc-CCC------
Confidence 2 2345699999999999999999999999999999999999999964322 111222211 111
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHhh
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPK-----MSEVLKMLE 577 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-----~~evl~~L~ 577 (623)
.++...+.++.+++.+||..||++||+ +.+++++-.
T Consensus 256 ----~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~ 296 (350)
T 1rdq_E 256 ----RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296 (350)
T ss_dssp ----CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred ----CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence 112223467899999999999999998 888887644
No 110
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.5e-40 Score=340.57 Aligned_cols=260 Identities=20% Similarity=0.365 Sum_probs=200.2
Q ss_pred cCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccc--cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIA--GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.+|.+.+.||+|+||.||+|.. .+|..||||+++..... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4688899999999999999986 47899999999753322 23456899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++|+|.+++.........+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999986544456799999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... .......... ........
T Consensus 189 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~-~~~~~~~~-- 259 (310)
T 2wqm_A 189 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSLCKKIE-QCDYPPLP-- 259 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-----CHHHHHHHHH-TTCSCCCC--
T ss_pred CCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-----hHHHHHHHhh-cccCCCCc--
Confidence 322 22334589999999999999999999999999999999999999863221 1112222221 11111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....+.++.+++.+||+.||++|||+.++++.|+.
T Consensus 260 ------~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~ 294 (310)
T 2wqm_A 260 ------SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKR 294 (310)
T ss_dssp ------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ------ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 11223678999999999999999999999999987
No 111
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.9e-41 Score=340.85 Aligned_cols=255 Identities=29% Similarity=0.379 Sum_probs=202.9
Q ss_pred CCCcCCceeccCCeEEEEEEeCC----CcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCce-EEE
Q 006968 302 NFSAKNILGRGGFGIVYKGCFSD----GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENER-LLV 376 (623)
Q Consensus 302 ~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~-~lv 376 (623)
.|...+.||+|+||.||+|.+.+ +..||+|.++..........+.+|+.+++.++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 35566899999999999998532 3379999997655444556799999999999999999999999876655 999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccC
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~ 456 (623)
|||+.+|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 9999999999999763 35689999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC---CceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 457 HRD---SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 457 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
... ........+++.|+|||.+.+..++.++||||||+++|+|++|+.|+....... .... .... +.
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~---~~~~---~~~~-~~--- 245 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF---DLTH---FLAQ-GR--- 245 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG---GHHH---HHHT-TC---
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH---HHHH---Hhhc-CC---
Confidence 322 112234458899999999999999999999999999999999666653221111 1111 1111 11
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....+...+..+.+++.+||+.||.+|||+.++++.|++
T Consensus 246 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~ 284 (298)
T 3pls_A 246 ------RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284 (298)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ------CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 011122234678999999999999999999999999987
No 112
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-41 Score=351.57 Aligned_cols=253 Identities=21% Similarity=0.295 Sum_probs=198.5
Q ss_pred cCCCcCCceeccCCeEEEEEEeCCCcEEEEEEeccccccc-chHHHHHHHHHHhhcCC--CceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVH--RNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H--~niv~l~~~~~~~~~~~lv~ 377 (623)
.+|.+.+.||+|+||.||+|...+++.||||+++...... ....+.+|+.++.+++| |||+++++++..++..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 5688899999999999999999889999999997544322 23568999999999987 99999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
| +.+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++....
T Consensus 89 e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp C-CCSEEHHHHHHHS----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred e-CCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 9 5688999999863 4689999999999999999999999 999999999999997 57899999999987654
Q ss_pred CCCc-eeecccccccccccccccc-----------CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHH
Q 006968 458 RDSH-VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKL 525 (623)
Q Consensus 458 ~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 525 (623)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ........
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~ 233 (343)
T 3dbq_A 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLHAI 233 (343)
T ss_dssp ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHHHH
T ss_pred ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh------HHHHHHHH
Confidence 3322 2334569999999999865 6788999999999999999999999963211 11111111
Q ss_pred hhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 526 HQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
++......++.....++.+++.+||..||++|||+.|++++-.
T Consensus 234 ---------~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 234 ---------IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp ---------HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred ---------hcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 1111111222222367899999999999999999999998654
No 113
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=4.4e-41 Score=345.60 Aligned_cols=262 Identities=25% Similarity=0.312 Sum_probs=205.3
Q ss_pred hcCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeee----cCCceE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS----TENERL 374 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~----~~~~~~ 374 (623)
.++|.+.+.||+|+||.||++.. .+|+.||||++.... ......+.+|+++++.++||||+++++++. .....+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 36788999999999999999997 478999999986532 234557899999999999999999999986 345789
Q ss_pred EEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccc
Q 006968 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (623)
Q Consensus 375 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~ 454 (623)
+||||+++|+|.+++.........+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 99999999999999987655567899999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCc--------eeeccccccccccccccccCC---CCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHH
Q 006968 455 LDHRDSH--------VTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523 (623)
Q Consensus 455 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 523 (623)
....... ......||+.|+|||.+.... ++.++||||||+++|||++|+.||........ .....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~-- 259 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD--SVALA-- 259 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS--CHHHH--
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc--hhhHH--
Confidence 4321110 011234799999999987554 68999999999999999999999853211100 01100
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCC
Q 006968 524 KLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDG 580 (623)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~ 580 (623)
... . .........+.++.+++.+||+.||.+|||+.+++++|+...
T Consensus 260 --~~~-~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 260 --VQN-Q--------LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp --HHC-C----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred --hhc-c--------CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 000 0 000111223467999999999999999999999999998843
No 114
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6e-41 Score=337.92 Aligned_cols=250 Identities=26% Similarity=0.406 Sum_probs=184.8
Q ss_pred cCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEeccccc--ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
++|.+.+.||+|+||.||+|.. .+|+.||||++..... ......+.+|+.++++++||||+++++++...+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5688899999999999999987 4789999999965432 122357899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 91 EMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp ECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 999999999998753 34689999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ .......
T Consensus 165 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------------~~~~~~~ 227 (278)
T 3cok_A 165 PHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT----------------LNKVVLA 227 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------------CCSS
T ss_pred CCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----------------HHHHhhc
Confidence 322 22335689999999999988999999999999999999999999964322110 0000000
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.. ..+...+.++.+++.+||+.||++|||+.+++++
T Consensus 228 ~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 228 DY--EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp CC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cc--CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 00 1122234678999999999999999999999874
No 115
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.2e-41 Score=374.45 Aligned_cols=255 Identities=27% Similarity=0.380 Sum_probs=209.5
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
.++|.+.+.||+|+||.||+|.+.++..||||+++... ....+|.+|++++++++||||+++++++.. +..++||||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 46688889999999999999999888889999997644 235679999999999999999999999876 678999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 459 (623)
+++|+|.++++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 343 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 343 MSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp CTTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred hcCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 99999999997532 23589999999999999999999999 99999999999999999999999999998764322
Q ss_pred CceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCccccccccc
Q 006968 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKD 538 (623)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (623)
........++..|+|||.+....++.++|||||||++|||++ |+.||..... .+....+.....
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~-------~~~~~~i~~~~~-------- 482 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------REVLDQVERGYR-------- 482 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH-------HHHHHHHHTTCC--------
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCC--------
Confidence 112223446789999999999999999999999999999999 8999863221 111222211111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 539 LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
...+..++.++.+++.+||+.||++|||+.+|++.|++.
T Consensus 483 --~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 521 (535)
T 2h8h_A 483 --MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521 (535)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred --CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 111223447789999999999999999999999999884
No 116
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=346.06 Aligned_cols=252 Identities=23% Similarity=0.302 Sum_probs=190.5
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
.++|.+.+.||+|+||.||+|... +++.||||+++... ....+.+|++++++++||||+++++++...+..++|||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 467889999999999999999986 58899999997543 34568899999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC---CCcEEEeeccccccc
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE---DFEAVVGDFGLAKLL 455 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~Dfgla~~~ 455 (623)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 129 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 129 LVTGGELFDRIVE----KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp CCCSCBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred eCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 9999999998875 34689999999999999999999999 9999999999999975 889999999999865
Q ss_pred CCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccc
Q 006968 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMV 535 (623)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (623)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........ .... .
T Consensus 202 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~~i~~-~~~~-~- 270 (349)
T 2w4o_A 202 EHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ------FMFRRILN-CEYY-F- 270 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH------HHHHHHHT-TCCC-C-
T ss_pred Cccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH------HHHHHHHh-CCCc-c-
Confidence 4322 2334569999999999999999999999999999999999999996432210 01111111 1110 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 536 DKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
........+.++.+++.+||..||++|||+.|++++-
T Consensus 271 ----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 307 (349)
T 2w4o_A 271 ----ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHP 307 (349)
T ss_dssp ----CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred ----CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 0011112346789999999999999999999999853
No 117
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.3e-40 Score=338.02 Aligned_cols=259 Identities=20% Similarity=0.215 Sum_probs=200.2
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc--chHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG--GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 376 (623)
.++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|+.++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468999999999999999999975 68999999997654322 235689999999999999999999999999999999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccC
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~ 456 (623)
|||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ----GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 9999999999999864 3689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
...........|++.|+|||.+.+..++.++||||||+++|||++|+.||...... .+........ .. .
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~-~~--~ 254 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--------VMGAHINQAI-PR--P 254 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--------HHHHHHHSCC-CC--G
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--------HHHHHhccCC-CC--c
Confidence 44333334556999999999999999999999999999999999999999743221 1111111111 00 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhhcCC
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRP-KMSEVLKMLEGDG 580 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-s~~evl~~L~~~~ 580 (623)
... ....+.++.+++.+||+.||++|| ++.++++.|+...
T Consensus 255 ~~~----~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 255 STV----RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp GGT----STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred ccc----CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 011 112235789999999999999999 9999999998743
No 118
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.8e-41 Score=346.51 Aligned_cols=245 Identities=22% Similarity=0.291 Sum_probs=204.3
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-------chHHHHHHHHHHhhcCCCceeeeeeeeecCC
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-------GEVQFQTEVETISLAVHRNLLRLCGFCSTEN 371 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 371 (623)
.++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|+.++++++||||+++++++...+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 467999999999999999999864 68999999997654221 2335788999999999999999999999999
Q ss_pred ceEEEEecccCC-ChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecc
Q 006968 372 ERLLVYPYMPNG-SVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFG 450 (623)
Q Consensus 372 ~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfg 450 (623)
..++||||+.+| +|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRH----PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTC----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEEEeCCCCccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 999999999777 999988753 4699999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCCC-CCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcC
Q 006968 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEG 529 (623)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 529 (623)
++........ .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||......
T Consensus 176 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----------------- 236 (335)
T 3dls_A 176 SAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET----------------- 236 (335)
T ss_dssp TCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----------------
T ss_pred cceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----------------
Confidence 9987654332 234569999999999988776 88999999999999999999999632110
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 530 KLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
...... .+...+.++.+++.+||+.||++|||+.+++++-.
T Consensus 237 -----~~~~~~--~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~ 277 (335)
T 3dls_A 237 -----VEAAIH--PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPW 277 (335)
T ss_dssp -----TTTCCC--CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTT
T ss_pred -----HhhccC--CCcccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 000000 01112367899999999999999999999999743
No 119
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.2e-40 Score=344.09 Aligned_cols=253 Identities=23% Similarity=0.269 Sum_probs=198.2
Q ss_pred hcCCCcCCceeccCCeEEEEEEe----CCCcEEEEEEecccccc---cchHHHHHHHHHHhhcCCCceeeeeeeeecCCc
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCF----SDGALVAVKRLKDYNIA---GGEVQFQTEVETISLAVHRNLLRLCGFCSTENE 372 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 372 (623)
.++|.+.+.||+|+||.||+|.. .+|+.||+|+++..... .....+.+|+.+++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35788999999999999999986 47899999999765322 233457899999999999999999999999999
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccc
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla 452 (623)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE----GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 99999999999999999763 3589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccc
Q 006968 453 KLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLS 532 (623)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (623)
+...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .....+... .
T Consensus 169 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~~~~i~~~-~-- 237 (327)
T 3a62_A 169 KESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-------KTIDKILKC-K-- 237 (327)
T ss_dssp -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHT-C--
T ss_pred cccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhC-C--
Confidence 7543222 2234456999999999999999999999999999999999999999743221 111221111 0
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhc
Q 006968 533 QMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRP-----KMSEVLKMLEG 578 (623)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~L~~ 578 (623)
..++...+.++.+++.+||..||++|| ++.|++++-.-
T Consensus 238 --------~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f 280 (327)
T 3a62_A 238 --------LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280 (327)
T ss_dssp --------CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGG
T ss_pred --------CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcc
Confidence 011222346789999999999999999 78898886443
No 120
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=6.4e-41 Score=341.28 Aligned_cols=255 Identities=31% Similarity=0.439 Sum_probs=201.2
Q ss_pred cCCCcCCceeccCCeEEEEEEeCC----CcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeee-cCCceEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSD----GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS-TENERLL 375 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~-~~~~~~l 375 (623)
.+|.+.+.||+|+||.||+|...+ +..||+|.++..........+.+|+.++++++||||+++++++. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457788999999999999998642 33699999976554445567999999999999999999999864 5567899
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 105 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp EEECCTTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred EEeCCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccc
Confidence 99999999999999753 34689999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCC---ceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCC-CCCCcccccccccchHHHHHHHhhcCcc
Q 006968 456 DHRDS---HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ-RALDFGRAANQRGVMLDWVKKLHQEGKL 531 (623)
Q Consensus 456 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (623)
..... .......+|+.|+|||.+.+..++.++||||||+++|||++|+ +|+...... ... ..... +.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~----~~~---~~~~~-~~- 249 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF----DIT---VYLLQ-GR- 249 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT----THH---HHHHT-TC-
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH----HHH---HHHhc-CC-
Confidence 44321 1223345788999999999999999999999999999999955 454422111 011 11111 11
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 532 SQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 250 --------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 288 (298)
T 3f66_A 250 --------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 288 (298)
T ss_dssp --------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 001112224678999999999999999999999999986
No 121
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-40 Score=340.42 Aligned_cols=266 Identities=25% Similarity=0.337 Sum_probs=201.7
Q ss_pred HHHhcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhc--CCCceeeeeeeeecC----
Q 006968 297 RAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLA--VHRNLLRLCGFCSTE---- 370 (623)
Q Consensus 297 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l--~H~niv~l~~~~~~~---- 370 (623)
....++|.+.+.||+|+||.||+|... |+.||||++... ....+..|.+++... +||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 345578999999999999999999884 899999998643 234556666666554 899999999999876
Q ss_pred CceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEecCCCCCCeEECCCCcEE
Q 006968 371 NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC-----DPKIIHRDVKAANILLDEDFEAV 445 (623)
Q Consensus 371 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlk~~NIll~~~~~~k 445 (623)
...++||||+++|+|.++++.. .+++..++.++.|++.||+|||+.+ +++|+||||||+|||++.++.+|
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred CceEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 6789999999999999999753 5899999999999999999999762 44899999999999999999999
Q ss_pred EeecccccccCCCCCce---eeccccccccccccccccCCCCCc------cchhhHHHHHHHHHhC----------CCCC
Q 006968 446 VGDFGLAKLLDHRDSHV---TTAVRGTVGHIAPEYLSTGQSSEK------TDVFGFGILLLELITG----------QRAL 506 (623)
Q Consensus 446 l~Dfgla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~SlGvil~elltg----------~~p~ 506 (623)
|+|||+++......... .....||+.|+|||++.+...+.+ +|||||||++|||+|| +.||
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 99999998765433221 124469999999999987766665 9999999999999999 4454
Q ss_pred CcccccccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 507 DFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....... ....................... ....++.++.+++.+||+.||++|||+.||+++|+.
T Consensus 263 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 263 HDLVPSD---PSYEDMREIVCIKKLRPSFPNRW---SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp TTTSCSS---CCHHHHHHHHTTSCCCCCCCGGG---GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred hhhcCCC---CchhhhHHHHhhhccCccccccc---hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 3221111 11111122111111111111110 123567889999999999999999999999999987
No 122
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.2e-40 Score=336.70 Aligned_cols=261 Identities=19% Similarity=0.215 Sum_probs=203.9
Q ss_pred HhcCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeee-ecCCceEEE
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC-STENERLLV 376 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lv 376 (623)
..++|.+.+.||+|+||.||+|.. .+++.||||++.... ...++.+|+++++.++|++++..++++ ...+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc---cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 357899999999999999999996 478999999875433 234688999999999998888777666 566778999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE---CCCCcEEEeeccccc
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAK 453 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~Dfgla~ 453 (623)
|||+ +++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++
T Consensus 84 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EECC-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEcc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 9999 99999998753 34699999999999999999999999 99999999999999 788999999999998
Q ss_pred ccCCCCCc------eeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhh
Q 006968 454 LLDHRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQ 527 (623)
Q Consensus 454 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 527 (623)
........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.....................
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (296)
T 4hgt_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS 236 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH
T ss_pred eccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccccc
Confidence 76544321 223456999999999999999999999999999999999999999754332222222211111111
Q ss_pred cCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 528 EGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
.... ..... .+.++.+++.+||+.||++|||+.++++.|++.
T Consensus 237 -~~~~-----~~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 237 -TPIE-----VLCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp -SCHH-----HHTTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred -chhh-----hhhcc----CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 0000 00111 136789999999999999999999999999874
No 123
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.8e-40 Score=338.67 Aligned_cols=255 Identities=20% Similarity=0.252 Sum_probs=207.8
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-----chHHHHHHHHHHhhcCCCceeeeeeeeecCCce
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-----GEVQFQTEVETISLAVHRNLLRLCGFCSTENER 373 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 373 (623)
.++|.+.+.||+|+||.||+|... +|+.||||.++...... ....+.+|+.+++.++||||+++++++...+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356889999999999999999975 68999999997654322 345799999999999999999999999999999
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC----cEEEeec
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF----EAVVGDF 449 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~Df 449 (623)
++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 999999999999999975 34689999999999999999999999 999999999999999887 7999999
Q ss_pred ccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcC
Q 006968 450 GLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEG 529 (623)
Q Consensus 450 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 529 (623)
|++....... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||..... .+.........
T Consensus 164 g~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~ 234 (321)
T 2a2a_A 164 GLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-------QETLANITSVS 234 (321)
T ss_dssp TTCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHTTC
T ss_pred ccceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhcc
Confidence 9998765432 22345699999999999999999999999999999999999999964322 11111111110
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 530 KLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
. ..+..... ..+..+.+++.+||..||++|||+.|++++-.
T Consensus 235 -~--~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~ 275 (321)
T 2a2a_A 235 -Y--DFDEEFFS----HTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275 (321)
T ss_dssp -C--CCCHHHHT----TCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTT
T ss_pred -c--ccChhhhc----ccCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 0 00111111 12367899999999999999999999998643
No 124
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4e-41 Score=347.63 Aligned_cols=256 Identities=28% Similarity=0.438 Sum_probs=204.0
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcE--EEEEEecccccccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCceEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGAL--VAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLV 376 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 376 (623)
++|.+.+.||+|+||.||+|... +|.. ||||.++..........+.+|++++.++ +||||+++++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57888999999999999999875 4554 5999997655455566799999999999 899999999999999999999
Q ss_pred EecccCCChhhhhhhcc------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcE
Q 006968 377 YPYMPNGSVASRLRDHI------------HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEA 444 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 444 (623)
|||+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999997642 2235799999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHH
Q 006968 445 VVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVK 523 (623)
Q Consensus 445 kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 523 (623)
||+|||+++...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .+...
T Consensus 182 kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-------~~~~~ 252 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-------AELYE 252 (327)
T ss_dssp EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHH
T ss_pred EEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-------HHHHH
Confidence 999999997432211 1223347889999999988889999999999999999998 9999864321 11111
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 524 KLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.... + .....+...+.++.+++.+||..||++|||+.+++++|+.
T Consensus 253 ~~~~-~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 297 (327)
T 1fvr_A 253 KLPQ-G---------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 297 (327)
T ss_dssp HGGG-T---------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred Hhhc-C---------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1111 1 0111122234678999999999999999999999999986
No 125
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.2e-41 Score=351.51 Aligned_cols=263 Identities=27% Similarity=0.364 Sum_probs=209.5
Q ss_pred cCCCcCCceeccCCeEEEEEEe-----CCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeee--cCCce
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS--TENER 373 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~ 373 (623)
++|.+.+.||+|+||.||+|.+ .++..||||+++... ......+.+|++++++++||||+++++++. ..+..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 5788899999999999999984 368899999997543 233456899999999999999999999886 45568
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 102 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred EEEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccce
Confidence 9999999999999999764 23589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCce--eeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCccccccc-------ccchHHHHHH
Q 006968 454 LLDHRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ-------RGVMLDWVKK 524 (623)
Q Consensus 454 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~-------~~~~~~~~~~ 524 (623)
......... .....||..|+|||.+.+..++.++||||||+++|+|++|+.||........ .......+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 254 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL- 254 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH-
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH-
Confidence 765443322 2234588889999999988899999999999999999999999864322100 000000011
Q ss_pred HhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
+.+........+...+.++.+++.+||+.||++|||+.|++++|+..
T Consensus 255 --------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 301 (327)
T 3lxl_A 255 --------ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 301 (327)
T ss_dssp --------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC
T ss_pred --------HHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11111111222333457899999999999999999999999999884
No 126
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.4e-40 Score=352.05 Aligned_cols=268 Identities=21% Similarity=0.269 Sum_probs=204.2
Q ss_pred hcCCCcCCceecc--CCeEEEEEEeC-CCcEEEEEEeccccccc-chHHHHHHHHHHhhcCCCceeeeeeeeecCCceEE
Q 006968 300 TSNFSAKNILGRG--GFGIVYKGCFS-DGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (623)
Q Consensus 300 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 375 (623)
..+|++.+.||+| +||.||+|... +|+.||||+++...... ....+.+|+.+++.++||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3578899999999 99999999986 69999999997654332 23468889999999999999999999999999999
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 999999999999997642 34599999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCCC------ceeecccccccccccccccc--CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHh-
Q 006968 456 DHRDS------HVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLH- 526 (623)
Q Consensus 456 ~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~- 526 (623)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .........
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~ 255 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM---LLEKLNGTVP 255 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH---HHHC------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH---HHHHhcCCCC
Confidence 32111 11122368999999999987 6789999999999999999999999964322111 100000000
Q ss_pred ---h-----c-------------Ccccccccc---------ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 527 ---Q-----E-------------GKLSQMVDK---------DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 527 ---~-----~-------------~~~~~~~~~---------~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
. . ......... .....+......++.+++.+||+.||++|||+.|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp --------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0 0 000000000 00001122334679999999999999999999999876
No 127
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=347.97 Aligned_cols=247 Identities=24% Similarity=0.274 Sum_probs=196.8
Q ss_pred CCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEecccCCC
Q 006968 306 KNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGS 384 (623)
Q Consensus 306 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 384 (623)
.+.||+|+||.||+|... +|..||+|+++.... .....+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 568999999999999874 689999999976432 345579999999999999999999999999999999999999999
Q ss_pred hhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE--CCCCcEEEeecccccccCCCCCce
Q 006968 385 VASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL--DEDFEAVVGDFGLAKLLDHRDSHV 462 (623)
Q Consensus 385 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll--~~~~~~kl~Dfgla~~~~~~~~~~ 462 (623)
|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 173 L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~-- 244 (373)
T 2x4f_A 173 LFDRIIDE---SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-- 244 (373)
T ss_dssp EHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--
T ss_pred HHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--
Confidence 99988753 34689999999999999999999999 99999999999999 6778999999999987654332
Q ss_pred eeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccccccCCC
Q 006968 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGN 542 (623)
Q Consensus 463 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... +.+..+...... ......
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-------~~~~~i~~~~~~---~~~~~~-- 312 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-------ETLNNILACRWD---LEDEEF-- 312 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHHTCCC---SCSGGG--
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhccCC---CChhhh--
Confidence 23345999999999999999999999999999999999999999643321 112222111100 000000
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 543 FDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 543 ~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
...+.++.+++.+||..||++|||+.|++++
T Consensus 313 --~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 313 --QDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp --TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --ccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1123678999999999999999999999984
No 128
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.5e-41 Score=343.42 Aligned_cols=252 Identities=29% Similarity=0.440 Sum_probs=196.7
Q ss_pred cCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEecc
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYM 380 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 380 (623)
++|.+.+.||+|+||.||+|.+ .++.||||+++.. .....|.+|++++++++||||+++++++. +..++||||+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~ 81 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA 81 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence 5688889999999999999988 4788999998643 34567999999999999999999999886 4589999999
Q ss_pred cCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCc-EEEeecccccccCCCC
Q 006968 381 PNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE-AVVGDFGLAKLLDHRD 459 (623)
Q Consensus 381 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-~kl~Dfgla~~~~~~~ 459 (623)
++|+|.+++.... ....+++..+..++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH- 159 (307)
T ss_dssp TTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence 9999999997542 1235789999999999999999999943239999999999999998886 799999999765422
Q ss_pred CceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccccc
Q 006968 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539 (623)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (623)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .......... +.. +..
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~-~~~-----~~~ 225 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP-----AFRIMWAVHN-GTR-----PPL 225 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS-----HHHHHHHHHT-TCC-----CCC
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc-----HHHHHHHHhc-CCC-----CCc
Confidence 22345899999999999999999999999999999999999999642211 1111111111 111 111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....+..+.+++.+||+.||++|||+.+++++|+.
T Consensus 226 ----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 260 (307)
T 2eva_A 226 ----IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTH 260 (307)
T ss_dssp ----BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ----ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 11223678999999999999999999999999987
No 129
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.4e-40 Score=358.51 Aligned_cols=253 Identities=23% Similarity=0.259 Sum_probs=199.1
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc--ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 376 (623)
.++|.+.+.||+|+||.||+|... +|+.||||+++.... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 356889999999999999999865 689999999975422 22334678999999999999999999999999999999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE-QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 9999999999999764 368999999999999999999998 7 9999999999999999999999999999864
Q ss_pred CCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccc
Q 006968 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMV 535 (623)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (623)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........... .
T Consensus 300 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~-~---- 366 (446)
T 4ejn_A 300 IKDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------EKLFELILMEE-I---- 366 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC-C----
T ss_pred cCCC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-------HHHHHHHHhCC-C----
Confidence 3322 223446799999999999999999999999999999999999999964322 11111111111 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhc
Q 006968 536 DKDLKGNFDRIELEEMVQVALLCTQFNPLHRP-----KMSEVLKMLEG 578 (623)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~L~~ 578 (623)
.++...+.++.+++.+||+.||++|| ++.|++++-.-
T Consensus 367 ------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f 408 (446)
T 4ejn_A 367 ------RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408 (446)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred ------CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccc
Confidence 11222346789999999999999999 99999986544
No 130
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.2e-41 Score=343.01 Aligned_cols=258 Identities=25% Similarity=0.349 Sum_probs=207.5
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeee--cCCceEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCS--TENERLL 375 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~~l 375 (623)
.++|.+.+.||+|+||.||+|... +|+.||+|.++..... .....+.+|+.++++++||||+++++++. ..+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357888999999999999999975 6899999999754432 23456899999999999999999999874 4567899
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-----eEecCCCCCCeEECCCCcEEEeecc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK-----IIHRDVKAANILLDEDFEAVVGDFG 450 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-----ivH~Dlk~~NIll~~~~~~kl~Dfg 450 (623)
||||+++|+|.+++.........+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999987544455699999999999999999999998 7 9999999999999999999999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCc
Q 006968 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530 (623)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (623)
++........ ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||..... .+...... .+.
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~i~-~~~ 232 (279)
T 2w5a_A 162 LARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-------KELAGKIR-EGK 232 (279)
T ss_dssp HHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHH-HTC
T ss_pred hheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-------HHHHHHHh-hcc
Confidence 9987654321 22334589999999999998999999999999999999999999874321 11111111 121
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 531 LSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.. ..+...+.++.+++.+||+.||++|||+.|++++++.
T Consensus 233 ~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 233 FR---------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp CC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred cc---------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 11 1112234678999999999999999999999998765
No 131
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.8e-40 Score=336.49 Aligned_cols=259 Identities=30% Similarity=0.435 Sum_probs=195.6
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
..+|.+.+.||+|+||.||+|... ..||||+++..... .....|.+|++++++++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 467889999999999999999864 35999999755432 2345689999999999999999999966 4567899999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 100 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 100 WCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp CCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred ecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccc
Confidence 99999999998653 35699999999999999999999999 9999999999999999999999999999865432
Q ss_pred C-Cceeeccccccccccccccc---cCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 459 D-SHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 459 ~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
. ........||+.|+|||.+. +..++.++||||||+++|||++|+.||....... . +......+.....
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~-~~~~~~~~~~~~~ 246 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD------Q-IIEMVGRGSLSPD 246 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH------H-HHHHHHHTSCCCC
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH------H-HHHHhcccccCcc
Confidence 2 22233456999999999986 5678889999999999999999999996432211 1 1111112211111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
.. ......+.++.+++.+||+.+|++|||+.++++.|++.
T Consensus 247 ~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l 286 (289)
T 3og7_A 247 LS-----KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286 (289)
T ss_dssp TT-----SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred hh-----hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 11 11223347799999999999999999999999999874
No 132
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.4e-42 Score=351.26 Aligned_cols=263 Identities=25% Similarity=0.314 Sum_probs=188.6
Q ss_pred cCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhh--cCCCceeeeeeeeecCC----ceE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL--AVHRNLLRLCGFCSTEN----ERL 374 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~----~~~ 374 (623)
++|.+.+.||+|+||.||+|.. +|+.||||+++.. ....+.+|.+++.. ++||||+++++++...+ ..+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 5789999999999999999987 5899999998643 34567888888877 79999999999998766 789
Q ss_pred EEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCeEECCCCcEEE
Q 006968 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH--------EQCDPKIIHRDVKAANILLDEDFEAVV 446 (623)
Q Consensus 375 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlk~~NIll~~~~~~kl 446 (623)
+||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||
T Consensus 78 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-B
T ss_pred EEEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEE
Confidence 999999999999999653 5788899999999999999999 76 9999999999999999999999
Q ss_pred eecccccccCCCCCce---eeccccccccccccccccC------CCCCccchhhHHHHHHHHHhC----------CCCCC
Q 006968 447 GDFGLAKLLDHRDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELITG----------QRALD 507 (623)
Q Consensus 447 ~Dfgla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~SlGvil~elltg----------~~p~~ 507 (623)
+|||+++......... .....||+.|+|||.+.+. .++.++||||||+++|||++| +.||.
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~ 229 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTT
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccc
Confidence 9999997665443321 2334699999999999776 344689999999999999999 45553
Q ss_pred cccccccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCCC
Q 006968 508 FGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLA 582 (623)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~ 582 (623)
......... ...... .............. .....+..+.+++.+||+.||++|||+.++++.|+.....
T Consensus 230 ~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 230 DLVPSDPSV--EEMRKV-VCEQKLRPNIPNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp TTCC-CCCC--C-CHHH-HTTSCCCCCCCGGG---GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred ccCCCCccH--HHHHHH-HHHhhcCCCccccc---cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 221110000 000011 11111111111111 0225667899999999999999999999999999885443
No 133
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=9.1e-41 Score=336.03 Aligned_cols=255 Identities=23% Similarity=0.326 Sum_probs=206.8
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
.++|.+.+.||+|+||.||+|... +++.||||+++..........+.+|+.+++.++||||+++++++...+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 457889999999999999999975 6899999999765544556679999999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 86 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 86 YCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp CCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred ecCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 9999999998864 34689999999999999999999999 9999999999999999999999999999865432
Q ss_pred CC-ceeeccccccccccccccccCCC-CCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 459 DS-HVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 459 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
.. .......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||........ ....| ....... .
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~----~~~~~~~---~ 229 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDW----KEKKTYL---N 229 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH--HHHHH----HTTCTTS---T
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHh----hhccccc---C
Confidence 21 12334568999999999987665 7899999999999999999999974332111 11111 1111000 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.....+..+.+++.+||+.||++|||+.|++++-
T Consensus 230 ------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 263 (276)
T 2yex_A 230 ------PWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (276)
T ss_dssp ------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred ------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCc
Confidence 0112236788999999999999999999998753
No 134
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.2e-41 Score=351.43 Aligned_cols=254 Identities=20% Similarity=0.238 Sum_probs=195.5
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
.++|.+.+.||+|+||.||++... +++.||||+++.... ....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT--SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc--ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 367899999999999999999976 789999999975432 23568899999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCc--EEEeecccccccC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE--AVVGDFGLAKLLD 456 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~--~kl~Dfgla~~~~ 456 (623)
|+++|+|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++...
T Consensus 97 ~~~~~~L~~~l~~~----~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 97 YASGGELYERICNA----GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp CCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred eCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 99999999998763 3599999999999999999999999 9999999999999987765 9999999997433
Q ss_pred CCCCceeeccccccccccccccccCCCCCc-cchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccc
Q 006968 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEK-TDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMV 535 (623)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (623)
.. .......||+.|+|||++.+..++.+ +||||||+++|+|++|+.||....... .....+....... .
T Consensus 170 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~~~~~~~~~~~-~---- 239 (361)
T 3uc3_A 170 LH--SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR---DYRKTIQRILSVK-Y---- 239 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC---CHHHHHHHHHTTC-C----
T ss_pred cc--CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH---HHHHHHHHHhcCC-C----
Confidence 22 12234469999999999988877655 899999999999999999997433211 1122222211111 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 536 DKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.... ....+.++.+++.+||..||++|||+.|++++-
T Consensus 240 --~~~~--~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp 276 (361)
T 3uc3_A 240 --SIPD--DIRISPECCHLISRIFVADPATRISIPEIKTHS 276 (361)
T ss_dssp --CCCT--TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred --CCCC--cCCCCHHHHHHHHHHccCChhHCcCHHHHHhCc
Confidence 0000 001236789999999999999999999999863
No 135
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1e-40 Score=347.46 Aligned_cols=252 Identities=23% Similarity=0.293 Sum_probs=206.3
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc--ccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCceE
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERL 374 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~ 374 (623)
..++|.+.+.||+|+||.||+|... +|+.||||+++.... ......+..|..++..+ +||||+++++++...+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3468999999999999999999986 488999999976432 23345688999999887 7999999999999999999
Q ss_pred EEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccc
Q 006968 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (623)
Q Consensus 375 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~ 454 (623)
+||||+++|+|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 98 lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 999999999999999764 3589999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
.... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+... ..
T Consensus 171 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-------~~~~~~i~~~-~~--- 238 (353)
T 2i0e_A 171 NIWD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-------DELFQSIMEH-NV--- 238 (353)
T ss_dssp CCCT-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHC-CC---
T ss_pred cccC-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-------HHHHHHHHhC-CC---
Confidence 4322 2234456799999999999999999999999999999999999999964322 1112222111 10
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHh
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPK-----MSEVLKML 576 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-----~~evl~~L 576 (623)
.++...+.++.+++.+||..||++||+ +.+++++-
T Consensus 239 -------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~ 278 (353)
T 2i0e_A 239 -------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 278 (353)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred -------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence 122233467899999999999999995 57787653
No 136
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.7e-40 Score=335.10 Aligned_cols=260 Identities=19% Similarity=0.216 Sum_probs=206.4
Q ss_pred hcCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeee-ecCCceEEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC-STENERLLVY 377 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lv~ 377 (623)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.... ...++.+|+.+++.++|++++..+.++ ...+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS---SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc---chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 36789999999999999999996 579999999986543 234689999999999998877776666 5567789999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE---CCCCcEEEeecccccc
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKL 454 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~Dfgla~~ 454 (623)
||+ +++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++..
T Consensus 85 e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 999 99999999753 34699999999999999999999999 99999999999999 4888999999999987
Q ss_pred cCCCCCc------eeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhc
Q 006968 455 LDHRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQE 528 (623)
Q Consensus 455 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 528 (623)
....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.....................
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~- 236 (296)
T 3uzp_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS- 236 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-
T ss_pred ccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC-
Confidence 6554321 123456999999999999999999999999999999999999999754332222222121111111
Q ss_pred CccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 529 GKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
.... .+... .+.++.+++.+||+.||++|||+.++++.|++.
T Consensus 237 ~~~~-----~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 278 (296)
T 3uzp_A 237 TPIE-----VLCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp SCHH-----HHTTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred CchH-----HHHhh----CCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence 0000 01111 236789999999999999999999999999873
No 137
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=6e-41 Score=339.16 Aligned_cols=249 Identities=22% Similarity=0.380 Sum_probs=202.0
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc-ccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCceEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLV 376 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 376 (623)
.++|.+.+.||+|+||.||+|... +++.||||+++.... .....++.+|+..+..+ +||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467889999999999999999976 799999999976432 23455788999999998 999999999999999999999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC---------------
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED--------------- 441 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~--------------- 441 (623)
|||+++|+|.+++.........+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999987543345799999999999999999999999 99999999999999844
Q ss_pred ----CcEEEeecccccccCCCCCceeeccccccccccccccccC-CCCCccchhhHHHHHHHHHhCCCCCCccccccccc
Q 006968 442 ----FEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFGRAANQRG 516 (623)
Q Consensus 442 ----~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~ 516 (623)
..+||+|||.+....... ...||+.|+|||.+.+. .++.++||||||+++|||++|++++.....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----- 236 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----- 236 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-----
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-----
Confidence 479999999998765432 23489999999999765 566899999999999999999987642211
Q ss_pred chHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 517 VMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
+ ... ..+.. +.+ +...+.++.+++.+||+.||++|||+.|++++-
T Consensus 237 ----~-~~~-~~~~~-----~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 281 (289)
T 1x8b_A 237 ----W-HEI-RQGRL-----PRI----PQVLSQEFTELLKVMIHPDPERRPSAMALVKHS 281 (289)
T ss_dssp ----H-HHH-HTTCC-----CCC----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred ----H-HHH-HcCCC-----CCC----CcccCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence 1 111 11111 111 122336789999999999999999999998863
No 138
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.9e-40 Score=340.84 Aligned_cols=269 Identities=25% Similarity=0.318 Sum_probs=210.2
Q ss_pred cCHHHHHHHhcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhh--cCCCceeeeeeeee
Q 006968 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL--AVHRNLLRLCGFCS 368 (623)
Q Consensus 291 ~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~ 368 (623)
.++..-....++|.+.+.||+|+||.||+|.. +|+.||||+++.. ....+.+|.+++.. ++||||+++++++.
T Consensus 32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~ 106 (342)
T 1b6c_B 32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADN 106 (342)
T ss_dssp SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred CceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence 34444455667899999999999999999998 6899999999643 34567889988887 78999999999998
Q ss_pred cCC----ceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCe
Q 006968 369 TEN----ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH--------EQCDPKIIHRDVKAANI 436 (623)
Q Consensus 369 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlk~~NI 436 (623)
..+ ..++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||
T Consensus 107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NI 178 (342)
T 1b6c_B 107 KDNGTWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNI 178 (342)
T ss_dssp CCCSSCCCEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGE
T ss_pred ccCCccceeEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHE
Confidence 775 789999999999999999753 5899999999999999999999 66 999999999999
Q ss_pred EECCCCcEEEeecccccccCCCCCc---eeeccccccccccccccccCC------CCCccchhhHHHHHHHHHhC-----
Q 006968 437 LLDEDFEAVVGDFGLAKLLDHRDSH---VTTAVRGTVGHIAPEYLSTGQ------SSEKTDVFGFGILLLELITG----- 502 (623)
Q Consensus 437 ll~~~~~~kl~Dfgla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~SlGvil~elltg----- 502 (623)
+++.++.+||+|||++......... ......||+.|+|||.+.+.. ++.++||||||+++|||++|
T Consensus 179 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~ 258 (342)
T 1b6c_B 179 LVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 258 (342)
T ss_dssp EECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTT
T ss_pred EECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCC
Confidence 9999999999999999876544332 123446999999999987652 34689999999999999999
Q ss_pred -----CCCCCcccccccccchHHHHHHHhhcCccccccccccCCC-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 503 -----QRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGN-FDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 503 -----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
+.||....... .....+..... ..... +.+... .....+..+.+++.+||+.||++|||+.+|+++|
T Consensus 259 ~~~~~~~p~~~~~~~~--~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 331 (342)
T 1b6c_B 259 IHEDYQLPYYDLVPSD--PSVEEMRKVVC-EQKLR----PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 331 (342)
T ss_dssp BCCCCCCTTTTTSCSS--CCHHHHHHHHT-TSCCC----CCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHH
T ss_pred cccccccCccccCcCc--ccHHHHHHHHH-HHHhC----CCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence 56665322111 11112222221 11111 111111 1235667899999999999999999999999999
Q ss_pred hcC
Q 006968 577 EGD 579 (623)
Q Consensus 577 ~~~ 579 (623)
+..
T Consensus 332 ~~i 334 (342)
T 1b6c_B 332 SQL 334 (342)
T ss_dssp HHH
T ss_pred HHH
Confidence 873
No 139
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.9e-41 Score=341.80 Aligned_cols=254 Identities=26% Similarity=0.358 Sum_probs=203.1
Q ss_pred hcCCCcCC-ceeccCCeEEEEEEeC---CCcEEEEEEeccccccc-chHHHHHHHHHHhhcCCCceeeeeeeeecCCceE
Q 006968 300 TSNFSAKN-ILGRGGFGIVYKGCFS---DGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENERL 374 (623)
Q Consensus 300 ~~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 374 (623)
..+|.+.+ .||+|+||.||+|.+. ++..||||+++...... ...++.+|+++++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35677777 9999999999999642 47889999997654322 245799999999999999999999999 567789
Q ss_pred EEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccc
Q 006968 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (623)
Q Consensus 375 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~ 454 (623)
+||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 94 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEECCTTEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEeCCCCCHHHHHHhC----cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 999999999999999763 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcee--eccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCcc
Q 006968 455 LDHRDSHVT--TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKL 531 (623)
Q Consensus 455 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (623)
......... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... +..... ..+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~-~~~~~ 238 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-------EVTAML-EKGER 238 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHH-HTTCC
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-------HHHHHH-HcCCC
Confidence 654433222 22346789999999988889999999999999999999 99998643221 111111 11111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 532 SQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
...+...+.++.+++.+||+.||++|||+.++++.|++
T Consensus 239 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 276 (291)
T 1xbb_A 239 ---------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 276 (291)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11122334779999999999999999999999999986
No 140
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6.9e-41 Score=354.11 Aligned_cols=253 Identities=21% Similarity=0.282 Sum_probs=199.1
Q ss_pred cCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccc-cchHHHHHHHHHHhhcC--CCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAV--HRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ 377 (623)
.+|.+.+.||+|+||.||+|...+++.||||+++..... .....+.+|+.++.+++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458899999999999999999888999999999754332 23457899999999996 599999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
| +.+++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++.+..
T Consensus 136 E-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp E-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred e-cCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9 5688999999863 3689999999999999999999999 999999999999996 57999999999987654
Q ss_pred CCCc-eeecccccccccccccccc-----------CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHH
Q 006968 458 RDSH-VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKL 525 (623)
Q Consensus 458 ~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 525 (623)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ....+...
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~------~~~~~~~~ 280 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLHAI 280 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHHHHH
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH------HHHHHHHH
Confidence 3322 2344569999999999865 4688999999999999999999999963211 11111111
Q ss_pred hhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 526 HQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
. +......++...+.++.+++.+||..||++|||+.|++++-.
T Consensus 281 ~---------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~ 323 (390)
T 2zmd_A 281 I---------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 323 (390)
T ss_dssp H---------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred h---------CccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcC
Confidence 1 111111122222467899999999999999999999998643
No 141
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=7.3e-40 Score=330.95 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=205.4
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.++|.+.+.||+|+||.||+|... +|+.||+|+++..... .....+.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467899999999999999999875 5899999999765432 23356889999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCc---EEEeecccccc
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE---AVVGDFGLAKL 454 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~Dfgla~~ 454 (623)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 85 e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 999999999888764 3689999999999999999999999 9999999999999986655 99999999987
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
..... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... ........ +... .
T Consensus 158 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~-~~~~-~ 226 (284)
T 3kk8_A 158 VNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-------RLYAQIKA-GAYD-Y 226 (284)
T ss_dssp CCSSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHH-TCCC-C
T ss_pred cccCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-------HHHHHHHh-cccc-C
Confidence 65432 223456999999999999999999999999999999999999999643221 11111111 1110 0
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
..+ .....+.++.+++.+||+.||++|||+.|++++
T Consensus 227 ~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 227 PSP-----EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CTT-----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred Cch-----hhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000 011223678999999999999999999999885
No 142
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=347.24 Aligned_cols=264 Identities=23% Similarity=0.322 Sum_probs=197.2
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
++|.+.+.||+|+||.||+|... +++.||||+++..........+.+|+++++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46888999999999999999976 68999999997654333333567899999999999999999999999999999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 459 (623)
++ |+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CS-EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred cc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 97 5888888764 34689999999999999999999999 99999999999999999999999999998654332
Q ss_pred Cceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcC---cccccc
Q 006968 460 SHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEG---KLSQMV 535 (623)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 535 (623)
. ......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||........ ...+....... ......
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~ 229 (324)
T 3mtl_A 155 K-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ----LHFIFRILGTPTEETWPGIL 229 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHHCCCCTTTSTTGG
T ss_pred c-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHHhCCCChHhchhhh
Confidence 2 2233458999999999876 5689999999999999999999999975432211 11111111100 000000
Q ss_pred cc---------ccCCC----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 536 DK---------DLKGN----FDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 536 ~~---------~~~~~----~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.. ..... .......++.+++.+||+.||++|||+.|++++-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 283 (324)
T 3mtl_A 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHP 283 (324)
T ss_dssp GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcCh
Confidence 00 00000 0011236788999999999999999999998854
No 143
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.1e-40 Score=336.14 Aligned_cols=249 Identities=28% Similarity=0.415 Sum_probs=202.8
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc--cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA--GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 376 (623)
.++|.+.+.||+|+||.||+|... ++..||||++...... .....+.+|+.++++++||||+++++++...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467888999999999999999875 5789999998654322 2345689999999999999999999999999999999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccC
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~ 456 (623)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 88 ~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp ECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 9999999999999764 3589999999999999999999999 99999999999999999999999999986543
Q ss_pred CCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
.. ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||..... .+.........
T Consensus 161 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~------- 223 (279)
T 3fdn_A 161 SS---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-------QETYKRISRVE------- 223 (279)
T ss_dssp ----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHTC-------
T ss_pred cc---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-------HHHHHHHHhCC-------
Confidence 22 22345689999999999999999999999999999999999999964321 11111111110
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
..++...+..+.+++.+||+.||++|||+.|++++-
T Consensus 224 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 224 ----FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp ----CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred ----CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 111222346788999999999999999999999863
No 144
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.5e-41 Score=349.54 Aligned_cols=258 Identities=23% Similarity=0.290 Sum_probs=207.7
Q ss_pred cCCCcCCceeccCCeEEEEEEe----CCCcEEEEEEeccccc---ccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCc
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF----SDGALVAVKRLKDYNI---AGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENE 372 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~ 372 (623)
++|.+.+.||+|+||.||+|.. .+|+.||||+++.... ......+.+|++++..+ .||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5788999999999999999987 3689999999975432 12344678899999999 69999999999999999
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccc
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla 452 (623)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQR----ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred EEEEeecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 99999999999999999764 3589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeecccccccccccccccc--CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCc
Q 006968 453 KLLDHRDSHVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530 (623)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (623)
+..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ............
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~- 282 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS---QAEISRRILKSE- 282 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC---HHHHHHHHHHCC-
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch---HHHHHHHHhccC-
Confidence 8765433334445679999999999985 3478999999999999999999999964322111 112222221111
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhcC
Q 006968 531 LSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRP-----KMSEVLKMLEGD 579 (623)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~L~~~ 579 (623)
..++...+..+.+++.+||..||++|| |+.|++++..-.
T Consensus 283 ----------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~ 326 (355)
T 1vzo_A 283 ----------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ 326 (355)
T ss_dssp ----------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGT
T ss_pred ----------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchh
Confidence 112222346788999999999999999 999999987653
No 145
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3e-40 Score=332.32 Aligned_cols=247 Identities=21% Similarity=0.359 Sum_probs=182.0
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc--cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA--GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
++|.+.+.||+|+||.||+|... +|+.||+|+++..... .....+.+|+++++.++||||+++++++...+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999864 6899999999764322 23457899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+ +++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 93 e~~-~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHTS----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 67888877653 4699999999999999999999999 999999999999999999999999999986544
Q ss_pred CCCceeeccccccccccccccccCCC-CCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
... .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||..... ......... +..
T Consensus 165 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~-~~~----- 229 (275)
T 2eue_A 165 GNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-------PVLFKNISN-GVY----- 229 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH-TCC-----
T ss_pred ccc--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHh-CCC-----
Confidence 322 233458999999999987765 7899999999999999999999964321 111111111 110
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.++...+..+.+++.+||+.||++|||+.|++++
T Consensus 230 -----~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 230 -----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -----CCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 1122234678999999999999999999999874
No 146
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-40 Score=359.42 Aligned_cols=248 Identities=24% Similarity=0.399 Sum_probs=205.4
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc--cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA--GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.+|.+.+.||+|+||.||+|... +|+.||||+++..... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888999999999999999975 7999999999754321 23456899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 96 E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 96 EYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp ECCSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 99999999999865 34699999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeccccccccccccccccCCC-CCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
.. .....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... ......+.. +..
T Consensus 169 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-------~~~~~~i~~-~~~----- 233 (476)
T 2y94_A 169 GE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-------PTLFKKICD-GIF----- 233 (476)
T ss_dssp TC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-------HHHHHHHHT-TCC-----
T ss_pred cc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-------HHHHHHHhc-CCc-----
Confidence 32 2334569999999999988765 6899999999999999999999974321 111122111 110
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
..+.....++.+++.+||..||++|||+.|++++
T Consensus 234 -----~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 234 -----YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -----CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 0111223678999999999999999999999984
No 147
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=340.34 Aligned_cols=267 Identities=25% Similarity=0.300 Sum_probs=201.2
Q ss_pred HhcCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccc----cchHHHHHHHHHHhhcC---CCceeeeeeeeecC
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIA----GGEVQFQTEVETISLAV---HRNLLRLCGFCSTE 370 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~ 370 (623)
..++|.+.+.||+|+||+||+|.. .+|+.||||+++..... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999996 46899999999743321 12346778888877665 99999999999765
Q ss_pred C-----ceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEE
Q 006968 371 N-----ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV 445 (623)
Q Consensus 371 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 445 (623)
. ..++||||+. |+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence 5 4789999996 69999987642 23499999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHH
Q 006968 446 VGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKL 525 (623)
Q Consensus 446 l~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 525 (623)
|+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ........
T Consensus 161 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~ 235 (308)
T 3g33_A 161 LADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ---LGKIFDLI 235 (308)
T ss_dssp ECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH---HHHHHHHH
T ss_pred EeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHh
Confidence 99999998764332 23445689999999999999999999999999999999999999964332211 11111111
Q ss_pred hh--cCccccc---cccccCCC-------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 526 HQ--EGKLSQM---VDKDLKGN-------FDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 526 ~~--~~~~~~~---~~~~~~~~-------~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.. ....... ....+... .......++.+++.+||+.||++|||+.|++++-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~ 298 (308)
T 3g33_A 236 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 298 (308)
T ss_dssp CCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTST
T ss_pred CCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCc
Confidence 00 0000000 00000000 0012236789999999999999999999998753
No 148
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=6.9e-41 Score=348.57 Aligned_cols=249 Identities=29% Similarity=0.363 Sum_probs=202.0
Q ss_pred cCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEeccccccc--chHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAG--GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
+.|...+.||+|+||.||+|.. .+|+.||||+++...... ....+.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999986 478999999997543222 2346899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||++ |+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 134 e~~~-g~l~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp ECCS-EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred ecCC-CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 9997 6888887653 34699999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCceeeccccccccccccccc---cCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
. ....||+.|+|||++. ...++.++||||||+++|||++|+.||..... ...+........ ...
T Consensus 207 ~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~-------~~~~~~~~~~~~-~~~ 273 (348)
T 1u5q_A 207 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYHIAQNES-PAL 273 (348)
T ss_dssp B-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSCC-CCC
T ss_pred C-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHHhcCC-CCC
Confidence 2 2346999999999984 56789999999999999999999999864321 111222222111 111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
. ....+..+.+++.+||+.||++|||+.+++++..
T Consensus 274 ~--------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 274 Q--------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp C--------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred C--------CCCCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 0 1122367889999999999999999999988644
No 149
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.9e-40 Score=337.60 Aligned_cols=268 Identities=21% Similarity=0.238 Sum_probs=200.2
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-chHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
++|.+.+.||+|+||.||+|... +|+.||||++....... ....+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57889999999999999999975 58999999986544322 23468899999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 9999999888764 24589999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHH--------HHHHHhhcC
Q 006968 459 DSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--------WVKKLHQEG 529 (623)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~--------~~~~~~~~~ 529 (623)
.. ......||..|+|||.+.+ ..++.++||||||+++|+|++|+.||.............. +........
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 4agu_A 156 SD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred cc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence 22 2234468999999999876 6689999999999999999999999975433211110000 000000000
Q ss_pred ccccccccccCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 530 KLSQMVDKDLKGNFD-----RIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 530 ~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.......+......+ ...+.++.+++.+||+.||++|||+.|++++-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 286 (311)
T 4agu_A 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHP 286 (311)
T ss_dssp GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSG
T ss_pred ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcCh
Confidence 000000000000000 12245689999999999999999999999863
No 150
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.3e-40 Score=339.88 Aligned_cols=250 Identities=27% Similarity=0.375 Sum_probs=208.4
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
+.|...+.||+|+||.||+|... +++.||||+++..........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 56888999999999999999864 68999999997665555567899999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 459 (623)
+++++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 102 ~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 173 (303)
T 3a7i_A 102 LGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 173 (303)
T ss_dssp CTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred CCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence 999999999864 3689999999999999999999999 99999999999999999999999999998765432
Q ss_pred CceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccccc
Q 006968 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539 (623)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (623)
. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ........ .. .+.+
T Consensus 174 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~-~~-----~~~~ 239 (303)
T 3a7i_A 174 I-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-------KVLFLIPK-NN-----PPTL 239 (303)
T ss_dssp C-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHH-SC-----CCCC
T ss_pred c-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-------HHHHHhhc-CC-----CCCC
Confidence 2 223456899999999999999999999999999999999999998643221 11111111 11 1111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
... .+..+.+++.+||..||++|||+.+++++.
T Consensus 240 ~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 240 EGN----YSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp CSS----CCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ccc----cCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 222 236789999999999999999999998854
No 151
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=7.7e-41 Score=345.52 Aligned_cols=259 Identities=27% Similarity=0.368 Sum_probs=205.9
Q ss_pred hcCCCcCCceeccCCeEEEEEEe------CCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCce
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCF------SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENER 373 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 373 (623)
.++|.+.+.||+|+||.||+|.+ .++..||||+++.........++.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788999999999999999984 247789999997655445566799999999999999999999999999999
Q ss_pred EEEEecccCCChhhhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC---CCcEEEe
Q 006968 374 LLVYPYMPNGSVASRLRDHIH---GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE---DFEAVVG 447 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~ 447 (623)
++||||+++|+|.+++..... ....+++..++.++.|++.||.|||+. +|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999987532 124589999999999999999999999 9999999999999994 4469999
Q ss_pred ecccccccCCCCC-ceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHH
Q 006968 448 DFGLAKLLDHRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKL 525 (623)
Q Consensus 448 Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 525 (623)
|||++........ .......||+.|+|||.+.+..++.++||||||+++|||+| |+.||..... .+.....
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~~~~~~~ 258 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-------QEVLEFV 258 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH-------HHHHHHH
Confidence 9999986543322 22234457899999999998999999999999999999998 8899864321 1111221
Q ss_pred hhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 526 HQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
..... ...+...+..+.+++.+||+.||.+|||+.+++++|+.
T Consensus 259 ~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 301 (327)
T 2yfx_A 259 TSGGR----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 301 (327)
T ss_dssp HTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hcCCC----------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 11111 01112234678999999999999999999999999986
No 152
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.3e-40 Score=361.39 Aligned_cols=257 Identities=24% Similarity=0.299 Sum_probs=209.9
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc--cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA--GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
++|...+.||+|+||.||+|... +|+.||+|++++.... .....+..|+.++++++||||+++++++...+..++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56888899999999999999975 6999999999754322 23456889999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++|+|..++.........+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999987654456799999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........... ..
T Consensus 342 ~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~---~~~~~~~~i~~-~~------- 409 (543)
T 3c4z_A 342 GQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV---ENKELKQRVLE-QA------- 409 (543)
T ss_dssp TCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC---CHHHHHHHHHH-CC-------
T ss_pred CCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch---hHHHHHHHHhh-cc-------
Confidence 332 2334579999999999999999999999999999999999999997432211 11122222111 11
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPKM-----SEVLKM 575 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~-----~evl~~ 575 (623)
..++...+.++.+++.+||..||++||++ .+++++
T Consensus 410 ---~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 410 ---VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp ---CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred ---cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 01222334678999999999999999975 667654
No 153
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.9e-40 Score=362.82 Aligned_cols=257 Identities=24% Similarity=0.297 Sum_probs=209.6
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc--ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 376 (623)
.++|.+.+.||+|+||.||+|... +|+.||||+++.... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 356888999999999999999975 699999999975432 23345688999999999999999999999999999999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccC
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~ 456 (623)
|||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 263 mEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp ECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 99999999999987642 34599999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||........ .......... .
T Consensus 338 ~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~---~~~i~~~i~~-~------- 404 (576)
T 2acx_A 338 EGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK---REEVERLVKE-V------- 404 (576)
T ss_dssp TTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC---HHHHHHHHHH-C-------
T ss_pred cCc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh---HHHHHHHhhc-c-------
Confidence 432 23345799999999999998999999999999999999999999974322111 1111111111 1
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhh
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRP-----KMSEVLKMLE 577 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~L~ 577 (623)
...++...+.++.+++.+||..||++|| ++.||+++-.
T Consensus 405 ---~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~Hpf 447 (576)
T 2acx_A 405 ---PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPL 447 (576)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGG
T ss_pred ---cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChh
Confidence 0112222346789999999999999999 7899987643
No 154
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.1e-40 Score=349.19 Aligned_cols=272 Identities=21% Similarity=0.251 Sum_probs=207.2
Q ss_pred cCHHHHHHHhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcC-----CCceeeee
Q 006968 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-----HRNLLRLC 364 (623)
Q Consensus 291 ~~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~ 364 (623)
+++.+-....++|.+.+.||+|+||.||+|... +++.||||+++... .....+..|+.+++.+. ||||++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK--KYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH--HHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch--hhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 444444445678999999999999999999974 68999999996432 23446788999999886 99999999
Q ss_pred eeeecCCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC----
Q 006968 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE---- 440 (623)
Q Consensus 365 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---- 440 (623)
+++...+..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 103 GKFMYYDHMCLIFEPL-GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEETTEEEEEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCC
T ss_pred ceeeECCeeEEEEcCC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccccc
Confidence 9999999999999999 999999998642 33589999999999999999999999 9999999999999975
Q ss_pred ---------------------CCcEEEeecccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHH
Q 006968 441 ---------------------DFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLEL 499 (623)
Q Consensus 441 ---------------------~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~el 499 (623)
++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 252 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHH
Confidence 789999999999865432 2345689999999999999999999999999999999
Q ss_pred HhCCCCCCcccccccccchH--------HHHHHHhhcCcccccccc-----ccCCCC-------------C---HHHHHH
Q 006968 500 ITGQRALDFGRAANQRGVML--------DWVKKLHQEGKLSQMVDK-----DLKGNF-------------D---RIELEE 550 (623)
Q Consensus 500 ltg~~p~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-----~~~~~~-------------~---~~~~~~ 550 (623)
++|+.||...........+. .+........ .....+. ...... + ......
T Consensus 253 l~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (360)
T 3llt_A 253 YTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTN-GSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL 331 (360)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSG-GGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHH
T ss_pred HHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhcc-CccccCcccceecCcccccchhhhhhhhhcccccccchHHH
Confidence 99999997433211110000 1111110000 0000000 000000 0 001156
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 551 MVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 551 l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
+.+++.+||+.||++|||+.|++++
T Consensus 332 l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 332 FCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHhcCChhhCCCHHHHhcC
Confidence 7899999999999999999999865
No 155
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=342.00 Aligned_cols=267 Identities=27% Similarity=0.404 Sum_probs=198.5
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHH--HhhcCCCceeeeeeeee-----cCCc
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVET--ISLAVHRNLLRLCGFCS-----TENE 372 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~--l~~l~H~niv~l~~~~~-----~~~~ 372 (623)
.++|.+.+.||+|+||.||+|.. +++.||||+++... ...+..|.++ +..++||||+++++++. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 36788899999999999999987 78999999996432 3344555554 45689999999998543 2335
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------CCCeEecCCCCCCeEECCCCcEEE
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC------DPKIIHRDVKAANILLDEDFEAVV 446 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------~~~ivH~Dlk~~NIll~~~~~~kl 446 (623)
.++||||+++|+|.+++... ..++..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLH-----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHhhc-----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 68999999999999999753 4589999999999999999999873 348999999999999999999999
Q ss_pred eecccccccCCCCC-------ceeecccccccccccccccc-------CCCCCccchhhHHHHHHHHHhCCCCCCccccc
Q 006968 447 GDFGLAKLLDHRDS-------HVTTAVRGTVGHIAPEYLST-------GQSSEKTDVFGFGILLLELITGQRALDFGRAA 512 (623)
Q Consensus 447 ~Dfgla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~ 512 (623)
+|||+++.+..... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.|+......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 99999987653221 12224469999999999976 45677999999999999999998877543321
Q ss_pred ccccch----------HHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 513 NQRGVM----------LDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 513 ~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
...... ................+..... .....+.++.+++.+||+.||++|||+.|+++.|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ 315 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK--ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC--CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccc--cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence 111110 0111111111111111111111 123456789999999999999999999999999987
No 156
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.4e-40 Score=335.37 Aligned_cols=253 Identities=21% Similarity=0.336 Sum_probs=201.8
Q ss_pred cCCCcCCceeccCCeEEEEEEeCC-C-------cEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCc
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSD-G-------ALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENE 372 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 372 (623)
++|.+.+.||+|+||.||+|.... + ..||+|+++... ......+.+|+.++++++||||+++++++..++.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 568889999999999999998643 3 579999996543 3345679999999999999999999999999999
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCc--------E
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE--------A 444 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~--------~ 444 (623)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccccee
Confidence 99999999999999999864 23489999999999999999999999 9999999999999998887 9
Q ss_pred EEeecccccccCCCCCceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHH
Q 006968 445 VVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523 (623)
Q Consensus 445 kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 523 (623)
||+|||++..... .....||+.|+|||.+.+ ..++.++||||||+++|||++|+.|+...... .....
T Consensus 161 kl~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~------~~~~~ 229 (289)
T 4fvq_A 161 KLSDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS------QRKLQ 229 (289)
T ss_dssp EECCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHH
T ss_pred eeccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch------HHHHH
Confidence 9999999875432 123458899999999987 77899999999999999999966554322111 11111
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCCCc
Q 006968 524 KLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLAE 583 (623)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~~ 583 (623)
........ +...+.++.+++.+||+.||++|||+.+++++|++..-+.
T Consensus 230 ~~~~~~~~------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 230 FYEDRHQL------------PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp HHHTTCCC------------CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred HhhccCCC------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 11111111 1111245789999999999999999999999998854443
No 157
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.9e-41 Score=354.86 Aligned_cols=265 Identities=24% Similarity=0.366 Sum_probs=192.0
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc-ccchHHHHHHHHHHhhcC-CCceeeeeeeeecCC--ce
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAV-HRNLLRLCGFCSTEN--ER 373 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~--~~ 373 (623)
..++|.+.+.||+|+||.||+|... +|+.||||++..... ......+.+|+.++..+. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999864 689999999865422 223456889999999997 999999999997544 68
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
++||||++ |+|..+++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 87 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 99999997 688888875 2689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC--------------------Cceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCccccc
Q 006968 454 LLDHRD--------------------SHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAA 512 (623)
Q Consensus 454 ~~~~~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~ 512 (623)
.+.... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 237 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 654211 112234579999999999976 67899999999999999999999999754322
Q ss_pred ccccchHH--------------------HHHHHhhcCccccccccccCCCCC------------HHHHHHHHHHHHHccC
Q 006968 513 NQRGVMLD--------------------WVKKLHQEGKLSQMVDKDLKGNFD------------RIELEEMVQVALLCTQ 560 (623)
Q Consensus 513 ~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~l~~l~~~cl~ 560 (623)
.....+.. ............ .......++ .....++.+++.+||.
T Consensus 238 ~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~ 314 (388)
T 3oz6_A 238 NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIR---QSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQ 314 (388)
T ss_dssp HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC--------CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCC
T ss_pred HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCccccccc---CCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhc
Confidence 11111100 000000000000 000000000 0123578999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 006968 561 FNPLHRPKMSEVLKM 575 (623)
Q Consensus 561 ~~P~~RPs~~evl~~ 575 (623)
.||++|||+.|++++
T Consensus 315 ~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 315 FNPNKRISANDALKH 329 (388)
T ss_dssp SSGGGSCCHHHHTTS
T ss_pred cCcccCCCHHHHhCC
Confidence 999999999999887
No 158
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.7e-40 Score=340.70 Aligned_cols=260 Identities=27% Similarity=0.394 Sum_probs=197.4
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeC----CCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCC--
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTEN-- 371 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-- 371 (623)
..++|.+.+.||+|+||.||+|... ++..||||+++..... .....+.+|+.++++++||||+++++++...+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4567888999999999999999764 3458999999754332 23356899999999999999999999997654
Q ss_pred ---ceEEEEecccCCChhhhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEE
Q 006968 372 ---ERLLVYPYMPNGSVASRLRDHI--HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVV 446 (623)
Q Consensus 372 ---~~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl 446 (623)
..++||||+++|+|.+++.... .....+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEE
Confidence 3499999999999999985432 2345799999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCCc-eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHH
Q 006968 447 GDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKK 524 (623)
Q Consensus 447 ~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 524 (623)
+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... .. ..
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----~~---~~ 261 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE----MY---DY 261 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG----HH---HH
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH----HH---HH
Confidence 999999876543221 2233457889999999999999999999999999999999 888886432211 11 11
Q ss_pred HhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
... +.. ...+...+.++.+++.+||..||++|||+.+++++|+.
T Consensus 262 ~~~-~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 262 LLH-GHR---------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305 (313)
T ss_dssp HHT-TCC---------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHc-CCC---------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111 110 01122234679999999999999999999999999986
No 159
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.1e-39 Score=328.36 Aligned_cols=247 Identities=20% Similarity=0.302 Sum_probs=203.8
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
.++|.+.+.||+|+||.||+|... ++..||+|++..... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc-chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 457889999999999999999975 478999999976442 345679999999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE---CCCCcEEEeeccccccc
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~Dfgla~~~ 455 (623)
|+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++...
T Consensus 87 ~~~~~~L~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 87 LCTGGELFERVVHK----RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp CCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred ccCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 99999999988763 3589999999999999999999999 99999999999999 78899999999999876
Q ss_pred CCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccc
Q 006968 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMV 535 (623)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (623)
.... ......||+.|+|||.+.+ .++.++||||||+++|||++|+.||...... +....... +..
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~-~~~---- 224 (277)
T 3f3z_A 160 KPGK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS-------EVMLKIRE-GTF---- 224 (277)
T ss_dssp CTTS--CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHH-CCC----
T ss_pred cCcc--chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHh-CCC----
Confidence 5432 2334469999999999865 4899999999999999999999999643221 11111111 110
Q ss_pred ccccCCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 536 DKDLKGNFDR----IELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 536 ~~~~~~~~~~----~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.++. ..+.++.+++.+||+.||++|||+.+++++
T Consensus 225 ------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 225 ------TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp ------CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ------CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111 123678999999999999999999999764
No 160
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=5.8e-40 Score=344.33 Aligned_cols=250 Identities=16% Similarity=0.171 Sum_probs=203.8
Q ss_pred hcCCCcCCceeccCCeEEEEEE------eCCCcEEEEEEecccccccchHHHHHHHHHHhhcC---CCceeeeeeeeecC
Q 006968 300 TSNFSAKNILGRGGFGIVYKGC------FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV---HRNLLRLCGFCSTE 370 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~ 370 (623)
.++|.+.+.||+|+||.||+|. ..+++.||||+++.. ...++..|++++..++ |+||+++++++...
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 4678899999999999999994 346889999999753 3456788888888776 99999999999999
Q ss_pred CceEEEEecccCCChhhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC---------
Q 006968 371 NERLLVYPYMPNGSVASRLRDHIH-GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE--------- 440 (623)
Q Consensus 371 ~~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~--------- 440 (623)
+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999976432 245799999999999999999999999 9999999999999998
Q ss_pred --CCcEEEeecccccccCC-CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccc
Q 006968 441 --DFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGV 517 (623)
Q Consensus 441 --~~~~kl~Dfgla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~ 517 (623)
++.+||+|||+++.+.. ..........||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--- 293 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC--- 293 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE---
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce---
Confidence 89999999999976542 223344556799999999999999999999999999999999999999853221100
Q ss_pred hHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHhhc
Q 006968 518 MLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHR-PKMSEVLKMLEG 578 (623)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R-Ps~~evl~~L~~ 578 (623)
.....+.. ++ ....+.+++..|++.+|.+| |++.++.+.|++
T Consensus 294 ----------------~~~~~~~~-~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~ 336 (365)
T 3e7e_A 294 ----------------KPEGLFRR-LP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK 336 (365)
T ss_dssp ----------------EECSCCTT-CS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred ----------------eechhccc-cC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHH
Confidence 01111111 11 24567889999999999998 678888887765
No 161
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=345.98 Aligned_cols=266 Identities=18% Similarity=0.192 Sum_probs=199.4
Q ss_pred cCCCcCCceeccCCeEEEEEEeC----CCcEEEEEEeccccccc----------chHHHHHHHHHHhhcCCCceeeeeee
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAG----------GEVQFQTEVETISLAVHRNLLRLCGF 366 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~----------~~~~~~~e~~~l~~l~H~niv~l~~~ 366 (623)
++|.+.+.||+|+||.||+|... ++..||||++....... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888999999999999999975 57889999987543210 12246778888999999999999999
Q ss_pred eec----CCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC
Q 006968 367 CST----ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF 442 (623)
Q Consensus 367 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 442 (623)
+.. ....++||||+ +++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQN----GTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGG----GBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 877 67889999999 99999998764 2799999999999999999999999 999999999999999877
Q ss_pred --cEEEeecccccccCCCCC------ceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCccccccc
Q 006968 443 --EAVVGDFGLAKLLDHRDS------HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ 514 (623)
Q Consensus 443 --~~kl~Dfgla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~ 514 (623)
.+||+|||+++.+..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~- 267 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP- 267 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH-
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc-
Confidence 999999999987643211 11134569999999999999999999999999999999999999995321110
Q ss_pred ccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCC
Q 006968 515 RGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGL 581 (623)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~ 581 (623)
............ .....+..... ....+.++.+++.+||..||++|||+.+|++.|++..+
T Consensus 268 --~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 268 --VAVQTAKTNLLD-ELPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp --HHHHHHHHHHHH-TTTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred --HHHHHHHHhhcc-cccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 011111111110 11111110000 00123679999999999999999999999999988544
No 162
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=9.5e-41 Score=350.11 Aligned_cols=250 Identities=24% Similarity=0.280 Sum_probs=195.8
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc--chHHHHHHHHH-HhhcCCCceeeeeeeeecCCceEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG--GEVQFQTEVET-ISLAVHRNLLRLCGFCSTENERLLV 376 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~lv 376 (623)
++|.+.+.||+|+||.||+|... ++..||||++++..... ....+..|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 56888999999999999999976 58899999997654322 23456777776 5778999999999999999999999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccC
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~ 456 (623)
|||+++|+|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 118 ~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 118 LDYINGGELFYHLQRE----RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 9999999999999763 3688999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+... ..
T Consensus 191 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-------~~~~~~i~~~-~~----- 256 (373)
T 2r5t_A 191 EHN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-------AEMYDNILNK-PL----- 256 (373)
T ss_dssp CCC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-------HHHHHHHHHS-CC-----
T ss_pred cCC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-------HHHHHHHHhc-cc-----
Confidence 222 234456799999999999999999999999999999999999999964322 1111222111 10
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.++...+.++.+++.+||..||++||++.+.++.+
T Consensus 257 -----~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 257 -----QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp -----CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred -----CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 11122336789999999999999999985444333
No 163
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6.1e-40 Score=347.94 Aligned_cols=253 Identities=22% Similarity=0.271 Sum_probs=193.0
Q ss_pred cCCCcC-CceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHh-hcCCCceeeeeeeeec----CCce
Q 006968 301 SNFSAK-NILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETIS-LAVHRNLLRLCGFCST----ENER 373 (623)
Q Consensus 301 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~-~l~H~niv~l~~~~~~----~~~~ 373 (623)
++|.+. +.||+|+||.||+|... +|+.||||+++.. ..+.+|++++. ..+||||+++++++.. .+..
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 456555 68999999999999875 6899999998642 35778888874 4589999999998865 5678
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC---CCcEEEeecc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE---DFEAVVGDFG 450 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~Dfg 450 (623)
++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 135 ~lv~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeCCCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 9999999999999999763 234699999999999999999999999 9999999999999997 7899999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCc
Q 006968 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530 (623)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (623)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...............+. .+.
T Consensus 210 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~ 283 (400)
T 1nxk_A 210 FAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQ 283 (400)
T ss_dssp TCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTC
T ss_pred cccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCc
Confidence 998654322 23345689999999999999999999999999999999999999975433221111111111 111
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 531 LSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.. +........+.++.+++.+||..||++|||+.|++++-
T Consensus 284 ~~------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 284 YE------FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp CC------CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred cc------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 10 00000112346789999999999999999999999864
No 164
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.1e-39 Score=329.44 Aligned_cols=252 Identities=19% Similarity=0.283 Sum_probs=202.8
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-----chHHHHHHHHHHhhcCCCceeeeeeeeecCCceE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-----GEVQFQTEVETISLAVHRNLLRLCGFCSTENERL 374 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 374 (623)
++|.+.+.||+|+||.||+|... +|+.||+|.++...... ....+.+|+.++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888999999999999999986 68999999997654322 3567999999999999999999999999999999
Q ss_pred EEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC----cEEEeecc
Q 006968 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF----EAVVGDFG 450 (623)
Q Consensus 375 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~Dfg 450 (623)
+||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK----ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 999999999999999763 3689999999999999999999999 999999999999999877 89999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCc
Q 006968 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530 (623)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (623)
++....... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... +....... ..
T Consensus 158 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~-~~ 227 (283)
T 3bhy_A 158 IAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-------ETLTNISA-VN 227 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHT-TC
T ss_pred cceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-------HHHHHhHh-cc
Confidence 998764432 223445899999999999899999999999999999999999999643221 11111111 10
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 531 LSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
. ........ ..+..+.+++.+||..||++|||+.|++++
T Consensus 228 ~--~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 228 Y--DFDEEYFS----NTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp C--CCCHHHHT----TCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred c--CCcchhcc----cCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 0 00000001 123678999999999999999999999884
No 165
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.7e-40 Score=335.35 Aligned_cols=246 Identities=24% Similarity=0.388 Sum_probs=203.8
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeec---------
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCST--------- 369 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--------- 369 (623)
..+|.+.+.||+|+||.||+|... +|+.||+|+++... ..+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 457889999999999999999986 79999999997532 357899999999999999999998754
Q ss_pred -------CCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC
Q 006968 370 -------ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF 442 (623)
Q Consensus 370 -------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 442 (623)
....++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCC
Confidence 345799999999999999997642 34689999999999999999999999 999999999999999999
Q ss_pred cEEEeecccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHH
Q 006968 443 EAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWV 522 (623)
Q Consensus 443 ~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~ 522 (623)
.+||+|||++........ .....||+.|+|||.+.+..++.++||||||+++|||++|..|+.... .+.
T Consensus 160 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---------~~~ 228 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS---------KFF 228 (284)
T ss_dssp EEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH---------HHH
T ss_pred CEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH---------HHH
Confidence 999999999987654322 233458999999999999999999999999999999999998874211 111
Q ss_pred HHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 523 KKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
.... .+. +... .+.++.+++.+||+.||++|||+.|++++|+..
T Consensus 229 ~~~~-~~~--------~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~ 272 (284)
T 2a19_B 229 TDLR-DGI--------ISDI----FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272 (284)
T ss_dssp HHHH-TTC--------CCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHhh-ccc--------cccc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1111 111 1111 235688999999999999999999999999873
No 166
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2e-40 Score=370.78 Aligned_cols=247 Identities=26% Similarity=0.378 Sum_probs=198.1
Q ss_pred CceeccCCeEEEEEEeC---CCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEecccC
Q 006968 307 NILGRGGFGIVYKGCFS---DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPN 382 (623)
Q Consensus 307 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 382 (623)
+.||+|+||.||+|.+. .++.||||+++..... ....+|.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999753 4678999999765432 234679999999999999999999999964 568899999999
Q ss_pred CChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCCCc-
Q 006968 383 GSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH- 461 (623)
Q Consensus 383 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~- 461 (623)
|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 454 g~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhhC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 9999999753 4689999999999999999999999 9999999999999999999999999999877543322
Q ss_pred -eeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCcccccccccc
Q 006968 462 -VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDL 539 (623)
Q Consensus 462 -~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (623)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... +....+ ..+.
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-------~~~~~i-~~~~--------- 589 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-------EVTAML-EKGE--------- 589 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHH-HTTC---------
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHH-HcCC---------
Confidence 2233447789999999999999999999999999999998 99999643221 111111 1111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 540 KGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
....+...+.++.+++..||+.||++|||+.+|++.|++
T Consensus 590 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 628 (635)
T 4fl3_A 590 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 628 (635)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 111222345789999999999999999999999999976
No 167
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.3e-40 Score=343.60 Aligned_cols=253 Identities=21% Similarity=0.321 Sum_probs=202.1
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCceEEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.++|.+.+.||+|+||.||+|... +|+.||||+++.... ...+|++++.++ +||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 457899999999999999999975 689999999975432 345788888887 7999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC----CcEEEeeccccc
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED----FEAVVGDFGLAK 453 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~----~~~kl~Dfgla~ 453 (623)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||+.++ +.+||+|||+++
T Consensus 96 E~~~gg~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 96 ELMKGGELLDKILRQ----KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp CCCCSCBHHHHHHTC----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred eCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 999999999998753 4699999999999999999999999 99999999999998543 359999999998
Q ss_pred ccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 454 LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+....+.. +...
T Consensus 169 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~~~~i~~-~~~~- 241 (342)
T 2qr7_A 169 QLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD----TPEEILARIGS-GKFS- 241 (342)
T ss_dssp ECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS----CHHHHHHHHHH-CCCC-
T ss_pred cCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC----CHHHHHHHHcc-CCcc-
Confidence 7654332 234456899999999998888899999999999999999999999743211 11122222211 1111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
+...+....+.++.+++.+||..||++|||+.+++++-
T Consensus 242 -----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 242 -----LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp -----CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred -----cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 11111122346789999999999999999999998753
No 168
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.2e-40 Score=344.32 Aligned_cols=265 Identities=20% Similarity=0.287 Sum_probs=194.6
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-chHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEE
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 376 (623)
..++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|++++++++||||+++++++...+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 3467999999999999999999864 68999999997544322 234578999999999999999999999999999999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE-----CCCCcEEEeeccc
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL-----DEDFEAVVGDFGL 451 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll-----~~~~~~kl~Dfgl 451 (623)
|||++ |+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 112 ~e~~~-~~L~~~~~~~----~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKN----PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCS-EEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCC-CCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 99997 5999988763 3589999999999999999999999 99999999999999 4555699999999
Q ss_pred ccccCCCCCceeeccccccccccccccccC-CCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcC-
Q 006968 452 AKLLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEG- 529 (623)
Q Consensus 452 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 529 (623)
++....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||........ ............
T Consensus 184 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~ 259 (329)
T 3gbz_A 184 ARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ---LFKIFEVLGLPDD 259 (329)
T ss_dssp HHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCT
T ss_pred ccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH---HHHHHHHhCCCch
Confidence 987653322 23334589999999999774 489999999999999999999999974332111 111111110000
Q ss_pred -cccccc-----ccc---cCCC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 530 -KLSQMV-----DKD---LKGN-----FDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 530 -~~~~~~-----~~~---~~~~-----~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
...... ... .... .......++.+++.+||+.||++|||+.|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 260 TTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000000 000 0000 001123678999999999999999999999885
No 169
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.5e-40 Score=334.98 Aligned_cols=249 Identities=29% Similarity=0.398 Sum_probs=197.3
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecC-CceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE-NERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-~~~~lv~e 378 (623)
.++|.+.+.||+|+||.||+|.. +|+.||||+++... ....+.+|++++++++||||+++++++... +..++|||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 35788899999999999999987 58899999997532 355789999999999999999999987554 57899999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170 (278)
T ss_dssp CCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred cCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence 999999999997642 12378999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
.....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ....... +
T Consensus 171 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-------~~~~~~~-~-------- 230 (278)
T 1byg_A 171 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPRVEK-G-------- 230 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG-------HHHHHTT-T--------
T ss_pred ----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHhc-C--------
Confidence 122347889999999998899999999999999999998 999986432211 1111111 1
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.....+...+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 231 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 270 (278)
T 1byg_A 231 -YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 270 (278)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHH
Confidence 0111222334678999999999999999999999999976
No 170
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=8.7e-41 Score=340.82 Aligned_cols=266 Identities=25% Similarity=0.359 Sum_probs=188.7
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
..++|.+.+.||+|+||.||+|... +++.||||++..........++.+|+.++++++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 3468999999999999999999864 689999999876544444567899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 378 PYMPNGSVASRLRDHI----HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
||+++++|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 9999999999987521 1234699999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC----ceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhc
Q 006968 454 LLDHRDS----HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQE 528 (623)
Q Consensus 454 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 528 (623)
....... .......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||........ ..... .
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~--~ 241 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV------LMLTL--Q 241 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH------HHHHH--T
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH------HHHHh--c
Confidence 7643321 12234568999999999876 5689999999999999999999999974332111 01111 1
Q ss_pred CccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 529 GKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
...................+.++.+++.+||+.||.+|||+.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 242 NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp SSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11111000000001111223678999999999999999999999875
No 171
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.3e-40 Score=337.52 Aligned_cols=256 Identities=22% Similarity=0.276 Sum_probs=190.6
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHH-HHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~-~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.++|++.+.||+|+||.||+|... +|+.||||+++.........+ +.++...++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 367889999999999999999974 789999999976543333333 444555578889999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||++ |+|.+++.........+++..++.++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9997 5888888765555668999999999999999999999843 899999999999999999999999999987654
Q ss_pred CCCceeecccccccccccccc----ccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYL----STGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
... .....||+.|+|||.+ .+..++.++||||||+++|||++|+.||..... ....+......... .
T Consensus 163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~-~ 233 (290)
T 3fme_A 163 DVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT------PFQQLKQVVEEPSP-Q 233 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC------HHHHHHHHHHSCCC-C
T ss_pred ccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc------hHHHHHHHhccCCC-C
Confidence 322 2334589999999996 556789999999999999999999999963221 11111221111111 1
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
. .....+.++.+++.+||+.||++|||+.|++++
T Consensus 234 ~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 234 L--------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp C--------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred c--------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 0 111224678999999999999999999999873
No 172
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.9e-40 Score=344.92 Aligned_cols=267 Identities=21% Similarity=0.281 Sum_probs=205.0
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEec
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
++|.+.+.||+|+||.||+|... ++..||+|+++..........+.+|+.+++.++||||+++++++..++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 56888999999999999999976 68999999997654444456799999999999999999999999999999999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCC
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 459 (623)
+++|+|.+++... ..+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++......
T Consensus 113 ~~~~~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 185 (360)
T 3eqc_A 113 MDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 185 (360)
T ss_dssp CTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH-
T ss_pred CCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc-
Confidence 9999999999764 35899999999999999999999832 8999999999999999999999999999755321
Q ss_pred CceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchH--------HHH---------
Q 006968 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVML--------DWV--------- 522 (623)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~--------~~~--------- 522 (623)
......||+.|+|||++.+..++.++||||||+++|||++|+.||............. ...
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence 2234468999999999999999999999999999999999999997433211100000 000
Q ss_pred -----HHHhhcCccccccc----cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 523 -----KKLHQEGKLSQMVD----KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 523 -----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
..........+..+ ...........+.++.+++.+||..||++|||+.|++++-
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred ccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 00000000000000 0000000112346789999999999999999999998753
No 173
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.6e-40 Score=339.55 Aligned_cols=262 Identities=24% Similarity=0.387 Sum_probs=206.3
Q ss_pred cCCCcCCceeccCCeEEEEEEe-----CCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCC--ce
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN--ER 373 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~ 373 (623)
++|.+.+.||+|+||.||+|.+ .+|+.||||+++... ......+.+|++++++++||||+++++++...+ ..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 5688899999999999999984 368999999997542 334457999999999999999999999987644 78
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 120 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchh
Confidence 9999999999999999864 34689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCce--eeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccc-------cc-cchHHHHH
Q 006968 454 LLDHRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAAN-------QR-GVMLDWVK 523 (623)
Q Consensus 454 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~-------~~-~~~~~~~~ 523 (623)
......... .....++..|+|||.+.+..++.++||||||+++|||+||+.|+......- .. ......+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH
Confidence 765443321 223347788999999998889999999999999999999999875321100 00 00000111
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 524 KLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.....+ .....+...+.++.+++.+||+.||++|||+.|+++.|+.
T Consensus 274 ~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~ 319 (326)
T 2w1i_A 274 ELLKNN---------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319 (326)
T ss_dssp HHHHTT---------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHhhcC---------CCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111111 1111122344779999999999999999999999999986
No 174
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=6.7e-40 Score=353.92 Aligned_cols=265 Identities=20% Similarity=0.253 Sum_probs=196.0
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc-ccchHHHHHHHHHHhhcCCCceeeeeeeeecC------C
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTE------N 371 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~ 371 (623)
.++|.+.+.||+|+||.||+|... +|+.||||++..... ......+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 367999999999999999999865 689999999975432 22345688999999999999999999999654 3
Q ss_pred ceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccc
Q 006968 372 ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGL 451 (623)
Q Consensus 372 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgl 451 (623)
..++||||++++ |.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCCC-HHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 569999999764 5555532 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHH----------
Q 006968 452 AKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDW---------- 521 (623)
Q Consensus 452 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~---------- 521 (623)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+....+...
T Consensus 211 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 211 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp C-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred eeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9876532 2234456999999999999999999999999999999999999999754321111100000
Q ss_pred -----HHHHhhc-Cc-----cccccccccCCC---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 522 -----VKKLHQE-GK-----LSQMVDKDLKGN---FDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 522 -----~~~~~~~-~~-----~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.+..... .. ........+... .......++.+++.+||..||++|||+.|++++-
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 357 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence 0000000 00 000000000000 0122356789999999999999999999999864
No 175
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.2e-40 Score=347.61 Aligned_cols=265 Identities=20% Similarity=0.271 Sum_probs=200.0
Q ss_pred HHHhcCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecC-----
Q 006968 297 RAATSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE----- 370 (623)
Q Consensus 297 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~----- 370 (623)
.....+|.+.+.||+|+||.||+|.. .+|+.||||++.... ....+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 34567899999999999999999986 479999999986542 2234799999999999999999998443
Q ss_pred ---------------------------------CceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 006968 371 ---------------------------------NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417 (623)
Q Consensus 371 ---------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~ 417 (623)
...++||||++ |+|.+.+.........+++..+..++.|+++||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 33789999997 58888887655556689999999999999999999
Q ss_pred HHhCCCCCeEecCCCCCCeEEC-CCCcEEEeecccccccCCCCCceeeccccccccccccccccC-CCCCccchhhHHHH
Q 006968 418 LHEQCDPKIIHRDVKAANILLD-EDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGIL 495 (623)
Q Consensus 418 LH~~~~~~ivH~Dlk~~NIll~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvi 495 (623)
||+. +|+||||||+||+++ .++.+||+|||+++....... .....||+.|+|||.+.+. .++.++||||+||+
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9999 999999999999998 688999999999987654332 2344589999999998764 58999999999999
Q ss_pred HHHHHhCCCCCCcccccccccchHHHHHHHh---------hcCccccc-----cccccCCCCCHHHHHHHHHHHHHccCC
Q 006968 496 LLELITGQRALDFGRAANQRGVMLDWVKKLH---------QEGKLSQM-----VDKDLKGNFDRIELEEMVQVALLCTQF 561 (623)
Q Consensus 496 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~-----~~~~~~~~~~~~~~~~l~~l~~~cl~~ 561 (623)
+|||++|+.||......+.. ...+.... ........ ........++...+.++.+++.+||..
T Consensus 232 l~ell~g~~pf~~~~~~~~~---~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQL---VRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY 308 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHHH---HHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred HHHHHhCCCCCCCCChHHHH---HHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccC
Confidence 99999999999754322111 11111000 00000000 001111111222346789999999999
Q ss_pred CCCCCCCHHHHHHH
Q 006968 562 NPLHRPKMSEVLKM 575 (623)
Q Consensus 562 ~P~~RPs~~evl~~ 575 (623)
||++|||+.|++++
T Consensus 309 dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 309 EPDLRINPYEAMAH 322 (383)
T ss_dssp SGGGSCCHHHHHTS
T ss_pred ChhhCCCHHHHhcC
Confidence 99999999999874
No 176
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-40 Score=343.52 Aligned_cols=269 Identities=25% Similarity=0.292 Sum_probs=199.2
Q ss_pred HHhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc----chHHHHHHHHHHhhcCCCceeeeeeeeecCCc
Q 006968 298 AATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG----GEVQFQTEVETISLAVHRNLLRLCGFCSTENE 372 (623)
Q Consensus 298 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 372 (623)
...++|.+.+.||+|+||.||+|... +|+.||||+++...... ....+.+|+++++.++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999975 58999999997543221 12468899999999999999999999999999
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccc
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla 452 (623)
.++||||+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred eEEEEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 9999999976 888887653 34688999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeccccccccccccccccC-CCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhc--C
Q 006968 453 KLLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQE--G 529 (623)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~ 529 (623)
+....... ......||+.|+|||.+.+. .++.++||||||+++|||++|.+||........ ........... .
T Consensus 160 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~---~~~i~~~~~~~~~~ 235 (346)
T 1ua2_A 160 KSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ---LTRIFETLGTPTEE 235 (346)
T ss_dssp STTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCTT
T ss_pred eeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH---HHHHHHHcCCCChh
Confidence 87654322 23345689999999998764 578999999999999999999999864332111 11111111000 0
Q ss_pred ccccc---ccccc---CCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 530 KLSQM---VDKDL---KGNFD-----RIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 530 ~~~~~---~~~~~---~~~~~-----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
..... .+... ....+ ...+.++.+++.+||..||++|||+.|++++-.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~ 294 (346)
T 1ua2_A 236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294 (346)
T ss_dssp TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence 00000 00000 00001 122467999999999999999999999998754
No 177
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.6e-39 Score=346.95 Aligned_cols=256 Identities=22% Similarity=0.309 Sum_probs=194.2
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc-------cchHHHHHHHHHHhhcCCCceeeeeeeeecC
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-------GGEVQFQTEVETISLAVHRNLLRLCGFCSTE 370 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~ 370 (623)
..++|.+.+.||+|+||.||+|... +++.||||+++..... .....+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 4578999999999999999999875 5899999999754321 122358899999999999999999999854
Q ss_pred CceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC---CcEEEe
Q 006968 371 NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED---FEAVVG 447 (623)
Q Consensus 371 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~kl~ 447 (623)
+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred CceEEEEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 568999999999999888864 34699999999999999999999999 99999999999999754 459999
Q ss_pred ecccccccCCCCCceeecccccccccccccccc---CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHH
Q 006968 448 DFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524 (623)
Q Consensus 448 Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 524 (623)
|||+++..... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||....... .....
T Consensus 285 DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~---~~~~~--- 356 (419)
T 3i6u_A 285 DFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---SLKDQ--- 356 (419)
T ss_dssp CSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC---CHHHH---
T ss_pred ecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH---HHHHH---
Confidence 99999876532 22344569999999999853 567889999999999999999999996432211 11111
Q ss_pred HhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
...+.... . +... ...+.++.+++.+||+.||++|||+.|++++-.
T Consensus 357 -i~~~~~~~-~-~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 402 (419)
T 3i6u_A 357 -ITSGKYNF-I-PEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 402 (419)
T ss_dssp -HHTTCCCC-C-HHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred -HhcCCCCC-C-chhh----cccCHHHHHHHHHHccCChhHCcCHHHHhCCcc
Confidence 11111100 0 0000 012367899999999999999999999998643
No 178
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=345.63 Aligned_cols=260 Identities=18% Similarity=0.192 Sum_probs=203.2
Q ss_pred cCCCcCCceeccCCeEEEEEEeCC---------CcEEEEEEecccccccchHHHHHHHHHHhhcCCCceee---------
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSD---------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR--------- 362 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~--------- 362 (623)
++|.+.+.||+|+||.||+|.... ++.||||+++.. ..+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 578899999999999999999763 789999998653 36889999999999999998
Q ss_pred ------eeeeeec-CCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCC
Q 006968 363 ------LCGFCST-ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAAN 435 (623)
Q Consensus 363 ------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~N 435 (623)
+++++.. .+..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+|
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~N 189 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAEN 189 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGG
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHH
Confidence 5666655 67889999999 999999998642 24699999999999999999999999 99999999999
Q ss_pred eEECCCC--cEEEeecccccccCCCCCc------eeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCC
Q 006968 436 ILLDEDF--EAVVGDFGLAKLLDHRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507 (623)
Q Consensus 436 Ill~~~~--~~kl~Dfgla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~ 507 (623)
|+++.++ .+||+|||+++.+...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 8999999999876532211 1233469999999999999999999999999999999999999997
Q ss_pred cccccccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 508 FGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
...... ............ ......+.... ....+.++.+++.+||..||++|||+.++++.|++.
T Consensus 270 ~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 334 (352)
T 2jii_A 270 NCLPNT--EDIMKQKQKFVD--KPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEAL 334 (352)
T ss_dssp GGTTCH--HHHHHHHHHHHH--SCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred cCCcCH--HHHHHHHHhccC--Chhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence 432111 111122111111 11111111100 001236799999999999999999999999999874
No 179
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.1e-39 Score=332.99 Aligned_cols=257 Identities=21% Similarity=0.256 Sum_probs=198.0
Q ss_pred cCCCcC-CceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAK-NILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 377 (623)
+.|.+. +.||+|+||.||+|... +++.||||+++... ......+.+|++++.++ +||||+++++++...+..++||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 457774 78999999999999864 68999999997543 33456789999999885 7999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCc---EEEeecccccc
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE---AVVGDFGLAKL 454 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~Dfgla~~ 454 (623)
||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++..
T Consensus 91 e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 91 EKMRGGSILSHIHKR----RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp ECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 999999999999764 3689999999999999999999999 9999999999999998776 99999999976
Q ss_pred cCCCCC------ceeecccccccccccccccc-----CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccc------
Q 006968 455 LDHRDS------HVTTAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGV------ 517 (623)
Q Consensus 455 ~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~------ 517 (623)
...... .......||+.|+|||++.. ..++.++||||||+++|||++|+.||...........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 243 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence 542211 11223459999999999875 5678999999999999999999999975432111000
Q ss_pred --hHHHHHHHhhcCccccccccccCCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 518 --MLDWVKKLHQEGKLSQMVDKDLKGNFDR----IELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 518 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
......... .+.. .++. ..+.++.+++.+||..||++|||+.|++++-
T Consensus 244 ~~~~~~~~~i~-~~~~----------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 297 (316)
T 2ac3_A 244 ACQNMLFESIQ-EGKY----------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297 (316)
T ss_dssp HHHHHHHHHHH-HCCC----------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHST
T ss_pred hHHHHHHHHHh-ccCc----------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcCh
Confidence 001111111 1111 1111 1236789999999999999999999999864
No 180
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.3e-39 Score=334.49 Aligned_cols=259 Identities=22% Similarity=0.254 Sum_probs=203.7
Q ss_pred HHHhcCCCcC-CceeccCCeEEEEEEeC-CCcEEEEEEecccccc-cchHHHHHHHHHHhhcC-CCceeeeeeeeecCCc
Q 006968 297 RAATSNFSAK-NILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAV-HRNLLRLCGFCSTENE 372 (623)
Q Consensus 297 ~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~ 372 (623)
....+.|.+. +.||+|+||.||+|... +|+.||||+++..... .....+.+|+.++..++ ||||+++++++...+.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3345567766 88999999999999875 6899999999764433 23567899999999985 6999999999999999
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC---CCcEEEeec
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE---DFEAVVGDF 449 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~Df 449 (623)
.++||||+++|+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Df 178 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDF 178 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred EEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeC
Confidence 99999999999999998653 235699999999999999999999999 9999999999999997 789999999
Q ss_pred ccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcC
Q 006968 450 GLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEG 529 (623)
Q Consensus 450 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 529 (623)
|+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... +.........
T Consensus 179 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~i~~~~ 249 (327)
T 3lm5_A 179 GMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ-------ETYLNISQVN 249 (327)
T ss_dssp GGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTC
T ss_pred ccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-------HHHHHHHhcc
Confidence 9998765332 223456999999999999999999999999999999999999999643221 1111111110
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 530 KLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
. ..........+..+.+++.+||..||++|||+.|++++-
T Consensus 250 -~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~ 289 (327)
T 3lm5_A 250 -V------DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHS 289 (327)
T ss_dssp -C------CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCG
T ss_pred -c------ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCH
Confidence 0 001111112346789999999999999999999998763
No 181
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.9e-39 Score=326.81 Aligned_cols=248 Identities=25% Similarity=0.392 Sum_probs=198.6
Q ss_pred CCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeec----CCceEE
Q 006968 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCST----ENERLL 375 (623)
Q Consensus 302 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~l 375 (623)
.|.+.+.||+|+||.||+|... ++..||+|.++..... .....+.+|+.+++.++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4677788999999999999875 6889999999765432 234568999999999999999999998864 355899
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeEEC-CCCcEEEeecccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK--IIHRDVKAANILLD-EDFEAVVGDFGLA 452 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlk~~NIll~-~~~~~kl~Dfgla 452 (623)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||++
T Consensus 107 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEecCCCCHHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 99999999999999764 4689999999999999999999998 7 99999999999998 7899999999999
Q ss_pred cccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccc
Q 006968 453 KLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLS 532 (623)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (623)
...... ......||+.|+|||.+. +.++.++||||||+++|+|++|+.||..... .......... +...
T Consensus 180 ~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~-~~~~ 248 (290)
T 1t4h_A 180 TLKRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN------AAQIYRRVTS-GVKP 248 (290)
T ss_dssp GGCCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS------HHHHHHHHTT-TCCC
T ss_pred cccccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc------HHHHHHHHhc-cCCc
Confidence 764432 233456999999999886 4589999999999999999999999964222 1111222111 1111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 533 QMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
...+ ...+.++.+++.+||+.||++|||+.|++++
T Consensus 249 ~~~~--------~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 249 ASFD--------KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GGGG--------GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccC--------CCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1111 1122578999999999999999999999875
No 182
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=7e-40 Score=338.96 Aligned_cols=267 Identities=21% Similarity=0.320 Sum_probs=200.6
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-chHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
++|.+.+.||+|+||.||+|... +|+.||||++....... ....+.+|+.++++++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 57888999999999999999975 58999999986544322 23457899999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++++|..++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 105 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 105 FVDHTILDDLELF----PNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp CCSEEHHHHHHHS----TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred cCCcchHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 9999998887654 24599999999999999999999999 9999999999999999999999999999866433
Q ss_pred CCceeeccccccccccccccccC-CCCCccchhhHHHHHHHHHhCCCCCCcccccccccchH--------HHHHHHhhcC
Q 006968 459 DSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVML--------DWVKKLHQEG 529 (623)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~--------~~~~~~~~~~ 529 (623)
.. ......||+.|+|||.+.+. .++.++||||||+++|||++|+.||............. .+........
T Consensus 178 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 178 GE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred cc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence 22 23345689999999999775 78999999999999999999999997543221110000 0000011111
Q ss_pred ccccccccccCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 530 KLSQMVDKDLKGNFD-----RIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 530 ~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.......+......+ ...+.++.+++.+||+.||++|||+.|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 111111111111111 1234779999999999999999999999874
No 183
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.7e-40 Score=343.38 Aligned_cols=256 Identities=22% Similarity=0.305 Sum_probs=202.7
Q ss_pred hcCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccccchHHHHHHHHH-HhhcCCCceeeeeeeeecCCceEEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVET-ISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.++|.+.+.||+|+||.||+|.. .+|+.||||+++.........++..|..+ ++.++||||+++++++...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 35788889999999999999997 47899999999765544445566666665 77889999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++ +|.+++.........+++..++.++.|++.||+|||++. +|+||||||+||+++.++.+||+|||+++....
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 99975 999998765444567999999999999999999999732 899999999999999999999999999987643
Q ss_pred CCCceeeccccccccccccccc----cCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLS----TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
. .......||+.|+|||++. ...++.++||||||+++|||++|+.||..... ....+........ ..
T Consensus 207 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~------~~~~~~~~~~~~~-~~ 277 (340)
T 3an0_A 207 S--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT------PFQQLKQVVEEPS-PQ 277 (340)
T ss_dssp H--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC------HHHHHHHHHHSCC-CC
T ss_pred c--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc------hHHHHHHHhcCCC-CC
Confidence 2 1222346999999999964 34789999999999999999999999964221 1111222221111 11
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.. ....+.++.+++.+||..||++|||+.|++++
T Consensus 278 ~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 278 LP--------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp CC--------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CC--------cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 10 11234679999999999999999999999874
No 184
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6.7e-41 Score=353.00 Aligned_cols=245 Identities=13% Similarity=0.116 Sum_probs=191.1
Q ss_pred hcCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEeccccc--ccchHHHHHHH---HHHhhcCCCceeeee-------ee
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNI--AGGEVQFQTEV---ETISLAVHRNLLRLC-------GF 366 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~e~---~~l~~l~H~niv~l~-------~~ 366 (623)
.++|.+.+.||+|+||.||+|.. .+|+.||||+++.... ......+.+|+ +.++.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35688889999999999999996 4699999999975432 22345789999 455566899999998 55
Q ss_pred eecCC-----------------ceEEEEecccCCChhhhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 006968 367 CSTEN-----------------ERLLVYPYMPNGSVASRLRDHIH---GRPALDWARRKRIALGTARGLLYLHEQCDPKI 426 (623)
Q Consensus 367 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 426 (623)
+...+ ..++||||+ +|+|.+++..... ....+++..+..++.|++.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 55443 278999999 6899999986321 122355788999999999999999999 99
Q ss_pred EecCCCCCCeEECCCCcEEEeecccccccCCCCCceeeccccccccccccccccC-----------CCCCccchhhHHHH
Q 006968 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG-----------QSSEKTDVFGFGIL 495 (623)
Q Consensus 427 vH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~SlGvi 495 (623)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986332 3345567 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 496 LLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 496 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
+|||++|+.||....... ....+.. .. ..+ +.++.+++.+||..||++|||+.|++++
T Consensus 303 l~elltg~~Pf~~~~~~~----------------~~~~~~~-~~-~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 303 IYWIWCADLPITKDAALG----------------GSEWIFR-SC-KNI----PQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHHHHHSSCCC------C----------------CSGGGGS-SC-CCC----CHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHHHHHCCCCCccccccc----------------chhhhhh-hc-cCC----CHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 999999999996322111 1111111 00 122 3678999999999999999999999874
No 185
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=341.34 Aligned_cols=252 Identities=25% Similarity=0.323 Sum_probs=185.8
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcC-CCceeeeeeeee--------cC
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-HRNLLRLCGFCS--------TE 370 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~--------~~ 370 (623)
.+|.+.+.||+|+||.||+|... +|+.||||++.... ......+.+|+.++.++. ||||+++++++. ..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 57888999999999999999975 68999999985543 233457899999999996 999999999984 33
Q ss_pred CceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEecCCCCCCeEECCCCcEEEee
Q 006968 371 NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK--IIHRDVKAANILLDEDFEAVVGD 448 (623)
Q Consensus 371 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~kl~D 448 (623)
...++||||+. |+|.+++..... ...+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 45799999995 799999876432 34699999999999999999999998 7 99999999999999999999999
Q ss_pred cccccccCCCCCce-----------eecccccccccccccc---ccCCCCCccchhhHHHHHHHHHhCCCCCCccccccc
Q 006968 449 FGLAKLLDHRDSHV-----------TTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITGQRALDFGRAANQ 514 (623)
Q Consensus 449 fgla~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~ 514 (623)
||+++......... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||.......
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~- 260 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR- 260 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-
Confidence 99998765432211 1134589999999998 56678999999999999999999999996322110
Q ss_pred ccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 006968 515 RGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEG 578 (623)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 578 (623)
.................+.+++.+||+.||++|||+.|++++|+.
T Consensus 261 -------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 305 (337)
T 3ll6_A 261 -------------------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQE 305 (337)
T ss_dssp ------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred -------------------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 000000000111112457899999999999999999999999987
No 186
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=5.9e-40 Score=331.77 Aligned_cols=247 Identities=25% Similarity=0.388 Sum_probs=205.0
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc--ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
++|.+.+.||+|+||.||+|... ++..||||++..... ......+.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56888999999999999999975 578999999865432 223457899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 94 EFAPRGELYKELQKH----GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp CCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 999999999999764 3589999999999999999999999 999999999999999999999999999976543
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
.. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... +....... .. .
T Consensus 167 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~-~~------~ 229 (284)
T 2vgo_A 167 LR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-------ETHRRIVN-VD------L 229 (284)
T ss_dssp SC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHT-TC------C
T ss_pred cc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-------HHHHHHhc-cc------c
Confidence 22 23456899999999999999999999999999999999999999643221 11111111 11 1
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.++...+.++.+++.+||..||++|||+.+++++
T Consensus 230 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 230 ----KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ----CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 1122234678999999999999999999999874
No 187
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.1e-39 Score=329.48 Aligned_cols=249 Identities=22% Similarity=0.343 Sum_probs=205.7
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc--cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA--GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.+|.+.+.||+|+||.||+|... +++.||+|++...... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 57888999999999999999976 5889999998754322 23456889999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 95 e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 95 ELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp ECCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 999999999988753 3689999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... +....... ...
T Consensus 168 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~-~~~------ 232 (294)
T 2rku_A 168 DGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-------ETYLRIKK-NEY------ 232 (294)
T ss_dssp TTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHT-TCC------
T ss_pred Ccc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHhh-ccC------
Confidence 222 233456899999999999988999999999999999999999999643221 11111111 110
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
..+......+.+++.+||+.||++|||+.|++++
T Consensus 233 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 233 ----SIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----CCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1112223678899999999999999999999874
No 188
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=329.78 Aligned_cols=252 Identities=23% Similarity=0.325 Sum_probs=201.3
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
..++|.+.+.||+|+||.||+|... +|+.||||.++... ....+.+|+.++..++||||+++++++...+..++||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 4567999999999999999999875 58999999997532 3457899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 104 e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 104 EYCGAGSVSDIIRLR---NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp ECCTTEEHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred ecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 999999999998743 34689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... .......... .....
T Consensus 178 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~-~~~~~-- 246 (314)
T 3com_A 178 TMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-------RAIFMIPTNP-PPTFR-- 246 (314)
T ss_dssp TBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSC-CCCCS--
T ss_pred hcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCC-CcccC--
Confidence 322 223446899999999999989999999999999999999999999643221 1111111111 00000
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.+...+..+.+++.+||..||.+|||+.+++++
T Consensus 247 -----~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 247 -----KPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp -----SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -----CcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 111224678999999999999999999999874
No 189
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=6.5e-40 Score=343.51 Aligned_cols=273 Identities=22% Similarity=0.264 Sum_probs=201.9
Q ss_pred CHHHHHHHhcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccc----------hHHHHHHHHHHhhcCCCcee
Q 006968 292 TFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGG----------EVQFQTEVETISLAVHRNLL 361 (623)
Q Consensus 292 ~~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~e~~~l~~l~H~niv 361 (623)
...++....++|.+.+.||+|+||.||+|...+|..||||++........ ...+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 35677888899999999999999999999988899999999965432211 25789999999999999999
Q ss_pred eeeeeeec-----CCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCe
Q 006968 362 RLCGFCST-----ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANI 436 (623)
Q Consensus 362 ~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NI 436 (623)
++++++.. ....++||||++ |+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 99999843 335799999997 6888887643 44699999999999999999999999 999999999999
Q ss_pred EECCCCcEEEeecccccccCCCCCceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccc
Q 006968 437 LLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQR 515 (623)
Q Consensus 437 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~ 515 (623)
+++.++.+||+|||+++...... ......||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||.........
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 243 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243 (362)
T ss_dssp EECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred EEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99999999999999997543322 2334568999999999877 67899999999999999999999999753321111
Q ss_pred cchHHHHHHHhhcCcc-----------ccccccccC---CC----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 516 GVMLDWVKKLHQEGKL-----------SQMVDKDLK---GN----FDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 516 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~---~~----~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
... . ........ ...+..... .. ........+.+++.+||+.||++|||+.|++++-.
T Consensus 244 ~~i---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 319 (362)
T 3pg1_A 244 NKI---V-EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319 (362)
T ss_dssp HHH---H-HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred HHH---H-HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence 000 0 00000000 000000000 00 01122367899999999999999999999998643
No 190
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=7.2e-39 Score=335.76 Aligned_cols=257 Identities=21% Similarity=0.328 Sum_probs=205.9
Q ss_pred HHHHhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-------chHHHHHHHHHHhhc-CCCceeeeeee
Q 006968 296 LRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-------GEVQFQTEVETISLA-VHRNLLRLCGF 366 (623)
Q Consensus 296 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~l-~H~niv~l~~~ 366 (623)
......+|.+.+.||+|+||.||+|... +|+.||||+++...... ....+.+|+.++.++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445577999999999999999999985 69999999987543211 134578999999999 79999999999
Q ss_pred eecCCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEE
Q 006968 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVV 446 (623)
Q Consensus 367 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl 446 (623)
+...+..++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 99999999999999999999999763 3689999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCCceeecccccccccccccccc------CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHH
Q 006968 447 GDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST------GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD 520 (623)
Q Consensus 447 ~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~ 520 (623)
+|||++..+.... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||..... ..
T Consensus 242 ~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-------~~ 312 (365)
T 2y7j_A 242 SDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ-------IL 312 (365)
T ss_dssp CCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HH
T ss_pred EecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-------HH
Confidence 9999998765432 2334569999999999863 3578999999999999999999999964221 11
Q ss_pred HHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 521 WVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
....... +.... ..+.. . ..+.++.+++.+||..||++|||+.|++++
T Consensus 313 ~~~~i~~-~~~~~-~~~~~-~----~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 313 MLRMIME-GQYQF-SSPEW-D----DRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHHHHH-TCCCC-CHHHH-S----SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHh-CCCCC-CCccc-c----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111111 11100 00000 0 113568999999999999999999999985
No 191
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2e-39 Score=336.03 Aligned_cols=249 Identities=22% Similarity=0.340 Sum_probs=205.6
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc--cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA--GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.+|.+.+.||+|+||.||++... +++.||+|++...... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 56888899999999999999975 5889999998754322 23456899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++++|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 121 e~~~~~~L~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 121 ELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp CCCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 999999999988763 4689999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .+....... ...
T Consensus 194 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~-~~~------ 258 (335)
T 2owb_A 194 DGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-------KETYLRIKK-NEY------ 258 (335)
T ss_dssp TTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHH-TCC------
T ss_pred Ccc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-------HHHHHHHhc-CCC------
Confidence 322 23345689999999999998999999999999999999999999964321 111111111 110
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
. ++.....++.+++.+||+.||++|||+.|++++
T Consensus 259 ~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 259 S----IPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp C----CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred C----CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 111223678899999999999999999999874
No 192
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.5e-39 Score=331.73 Aligned_cols=254 Identities=22% Similarity=0.314 Sum_probs=200.1
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
.++|.+.+.||+|+||.||+|... ++..||+|++.... ......+.+|+++++.++||||+++++++...+..++|||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 467889999999999999999986 58999999986543 3345678999999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|+++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 97 FCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp CCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred eCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 99999999998764 34589999999999999999999999 9999999999999999999999999997543211
Q ss_pred CCceeecccccccccccccc-----ccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 459 DSHVTTAVRGTVGHIAPEYL-----STGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
........||+.|+|||.+ ....++.++||||||+++|||++|+.||..... ............ ..
T Consensus 171 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~-~~ 241 (302)
T 2j7t_A 171 -LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-------MRVLLKIAKSDP-PT 241 (302)
T ss_dssp -HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSCC-CC
T ss_pred -ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-------HHHHHHHhccCC-cc
Confidence 1112234589999999998 366789999999999999999999999874322 111112211111 11
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.. .+...+.++.+++.+||+.||++|||+.+++++-
T Consensus 242 ~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 277 (302)
T 2j7t_A 242 LL-------TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHP 277 (302)
T ss_dssp CS-------SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTST
T ss_pred cC-------CccccCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 10 1122246789999999999999999999998753
No 193
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=330.34 Aligned_cols=253 Identities=23% Similarity=0.335 Sum_probs=199.2
Q ss_pred CCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEecc
Q 006968 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYM 380 (623)
Q Consensus 302 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 380 (623)
+|.....||+|+||.||+|... ++..||||.++... ......+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 3445568999999999999964 68899999997643 333557899999999999999999999999999999999999
Q ss_pred cCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC-CCcEEEeecccccccCCCC
Q 006968 381 PNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE-DFEAVVGDFGLAKLLDHRD 459 (623)
Q Consensus 381 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~kl~Dfgla~~~~~~~ 459 (623)
++++|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++.......
T Consensus 102 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 102 PGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp SEEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 9999999998642 234578999999999999999999999 9999999999999987 8999999999998765322
Q ss_pred CceeeccccccccccccccccCC--CCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 460 SHVTTAVRGTVGHIAPEYLSTGQ--SSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
. ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||....... ........ .. ..+
T Consensus 178 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~-~~-----~~~ 245 (295)
T 2clq_A 178 P-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ-----AAMFKVGM-FK-----VHP 245 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH-----HHHHHHHH-HC-----CCC
T ss_pred C-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh-----HHHHhhcc-cc-----ccc
Confidence 2 233456899999999987653 7899999999999999999999986322110 01111100 00 011
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 538 DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
..+...+.++.+++.+||+.||++|||+.+++++
T Consensus 246 ----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 246 ----EIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ----CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ----cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1222334678999999999999999999999875
No 194
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.3e-40 Score=335.81 Aligned_cols=256 Identities=30% Similarity=0.420 Sum_probs=197.1
Q ss_pred cCCCcCCceeccCCeEEEEEEeC--CCc--EEEEEEeccccc--ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS--DGA--LVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERL 374 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 374 (623)
++|.+.+.||+|+||.||+|.+. ++. .||||+++.... ......+.+|++++++++||||+++++++...+ .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 57888999999999999999853 333 699999875432 223457899999999999999999999997654 88
Q ss_pred EEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccc
Q 006968 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (623)
Q Consensus 375 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~ 454 (623)
+|+||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 97 ~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 999999999999999864 24589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCce--eeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCcc
Q 006968 455 LDHRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKL 531 (623)
Q Consensus 455 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (623)
........ .....+|..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+...........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~~~~~~~~ 243 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-------SQILHKIDKEGER 243 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTSCCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-------HHHHHHHHccCCC
Confidence 65443322 223457889999999988889999999999999999999 9999864322 1122222211110
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 532 SQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
...+...+.++.+++.+||+.||++|||+.+++++|++.
T Consensus 244 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 282 (291)
T 1u46_A 244 ---------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 282 (291)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---------CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence 011122347799999999999999999999999999873
No 195
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-39 Score=340.45 Aligned_cols=260 Identities=23% Similarity=0.315 Sum_probs=195.3
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCC------c
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTEN------E 372 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~ 372 (623)
++|...+.||+|+||.||+|... +|+.||||++...... .....+.+|+++++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 57888999999999999999974 6999999998654322 22456889999999999999999999997653 4
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccc
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla 452 (623)
.++||||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 175 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 175 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecc
Confidence 69999999 8899999875 2589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHH--------HHH
Q 006968 453 KLLDHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLD--------WVK 523 (623)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~--------~~~ 523 (623)
+..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+....+.. +..
T Consensus 176 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 176 RQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp EECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred cccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 875432 234568999999999877 6789999999999999999999999975432211100000 000
Q ss_pred --------HHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 524 --------KLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 524 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.+.. .........+. ........++.+++.+||..||++|||+.|++++-
T Consensus 252 ~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp 309 (367)
T 1cm8_A 252 RLQSDEAKNYMK--GLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 309 (367)
T ss_dssp TCSCHHHHHHHH--HSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred HhhhHHHHHHHH--hCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcCh
Confidence 0000 00000000110 01112346789999999999999999999999863
No 196
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3e-39 Score=333.93 Aligned_cols=260 Identities=18% Similarity=0.255 Sum_probs=200.7
Q ss_pred cCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccccchHHHHHHHHHHhhcC-CCceeeeeeeeec--CCceEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-HRNLLRLCGFCST--ENERLLV 376 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~--~~~~~lv 376 (623)
++|.+.+.||+|+||.||+|.. .+++.||||+++.. ....+.+|++++++++ ||||+++++++.. ....++|
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 5688899999999999999986 47899999999743 3567899999999997 9999999999987 5678999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC-cEEEeeccccccc
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLL 455 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~kl~Dfgla~~~ 455 (623)
|||+++++|.+++.. +++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++..
T Consensus 112 ~e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp EECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 999999999988753 78999999999999999999999 999999999999999776 8999999999876
Q ss_pred CCCCCceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccc-cc---------hHHHHHH
Q 006968 456 DHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQR-GV---------MLDWVKK 524 (623)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~-~~---------~~~~~~~ 524 (623)
..... .....||..|+|||.+.+ ..++.++||||||+++|||++|+.||......... .. ..+++..
T Consensus 182 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 182 HPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp CTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHH
Confidence 54332 233468999999999877 67899999999999999999999999543221110 00 0011110
Q ss_pred Hhhc----------CccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 525 LHQE----------GKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 525 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.... ......+............+.++.+++.+||+.||++|||+.|++++-
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp 321 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 321 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSG
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCc
Confidence 0000 000000001111111122357899999999999999999999999864
No 197
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1e-39 Score=332.38 Aligned_cols=265 Identities=21% Similarity=0.301 Sum_probs=201.6
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
++|++.+.||+|+||.||+|... +|+.||||+++..... .....+.+|+.++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999976 6899999998754322 223578899999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 458 (623)
|++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~-~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 997 69999987642 24589999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCceeeccccccccccccccccCC-CCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCc--cc---
Q 006968 459 DSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK--LS--- 532 (623)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~--- 532 (623)
.. ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||........ .....+....... ..
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 232 (299)
T 2r3i_A 157 VR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ---LFRIFRTLGTPDEVVWPGVT 232 (299)
T ss_dssp SB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGG
T ss_pred cc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHHHHhCCCchhhhhHhh
Confidence 22 223345899999999997765 79999999999999999999999974332111 1111111100000 00
Q ss_pred c--ccccccCCC----C---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 533 Q--MVDKDLKGN----F---DRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 533 ~--~~~~~~~~~----~---~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
. ...+.+... + ....+.++.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp GSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 000001000 0 01123678999999999999999999999885
No 198
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.9e-39 Score=329.14 Aligned_cols=251 Identities=22% Similarity=0.331 Sum_probs=203.2
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
.++|.+.+.||+|+||.||+|... +|+.||+|+++.... .....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 357889999999999999999975 689999999975432 234568899999999999999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE---CCCCcEEEeeccccccc
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~Dfgla~~~ 455 (623)
|+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++...
T Consensus 87 ~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 87 LVSGGELFDRILER----GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp CCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred cCCCccHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 99999999998763 3589999999999999999999999 99999999999999 78899999999999754
Q ss_pred CCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccc
Q 006968 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMV 535 (623)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (623)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ......... +...
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~i~~-~~~~--- 225 (304)
T 2jam_A 160 QNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-------SKLFEKIKE-GYYE--- 225 (304)
T ss_dssp CCB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHH-CCCC---
T ss_pred CCC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHc-CCCC---
Confidence 322 22334589999999999999999999999999999999999999964321 111111111 1110
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 536 DKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.........+.++.+++.+||..||++|||+.|++++
T Consensus 226 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 226 ---FESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp ---CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ---CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0111112234678999999999999999999999884
No 199
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8.6e-40 Score=329.01 Aligned_cols=248 Identities=23% Similarity=0.400 Sum_probs=196.9
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc--ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
++|.+.+.||+|+||.||+|... +|+.||||+++.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57888999999999999999976 699999999965432 223457899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 91 EYVSGGELFDYICKH----GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp ECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred eccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 999999999999764 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeccccccccccccccccCCC-CCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVD 536 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (623)
.. ......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||..... ......... +..
T Consensus 164 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~-~~~----- 228 (276)
T 2h6d_A 164 GE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-------PTLFKKIRG-GVF----- 228 (276)
T ss_dssp ---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH-CCC-----
T ss_pred Cc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-------HHHHHHhhc-Ccc-----
Confidence 32 2234458999999999987765 6899999999999999999999964221 111111111 110
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 537 KDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
..+.....++.+++.+||+.||++|||+.|++++
T Consensus 229 -----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 229 -----YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0111223678999999999999999999999985
No 200
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.1e-39 Score=346.95 Aligned_cols=194 Identities=23% Similarity=0.330 Sum_probs=153.9
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeec-----CCce
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCST-----ENER 373 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-----~~~~ 373 (623)
++|.+.+.||+|+||.||+|... +|+.||||++...... .....+.+|+++++.++||||+++++++.. ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 67999999999999999999865 6899999998654322 234578999999999999999999999843 3568
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
++||||+ +|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 133 ~lv~e~~-~~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp EEEECCC-SEEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEecc-ccchhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccch
Confidence 9999998 5788888865 34699999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC--------------------------ceeecccccccccccccc-ccCCCCCccchhhHHHHHHHHHhC
Q 006968 454 LLDHRDS--------------------------HVTTAVRGTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITG 502 (623)
Q Consensus 454 ~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlGvil~elltg 502 (623)
....... ......+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 7643221 122345689999999976 566799999999999999999994
No 201
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.8e-39 Score=349.37 Aligned_cols=262 Identities=17% Similarity=0.214 Sum_probs=205.6
Q ss_pred cCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccccchHHHHHHHHHHhhcCC-CceeeeeeeeecCCceEEEEe
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVH-RNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~~~~~~~~~~~lv~e 378 (623)
++|.+.+.||+|+||.||+|.. .+++.||||+++... ...++..|++++..++| +++..+..++...+..++|||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~---~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT---KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC---SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc---ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 6789999999999999999996 469999999886543 23468899999999987 455566666677888899999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE---CCCCcEEEeeccccccc
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~Dfgla~~~ 455 (623)
|+ +++|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.+
T Consensus 84 ~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 84 LL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred CC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 99 99999999753 34699999999999999999999999 99999999999999 58899999999999876
Q ss_pred CCCCCc------eeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcC
Q 006968 456 DHRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEG 529 (623)
Q Consensus 456 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 529 (623)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+...... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~-~~~~ 235 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK-KVAT 235 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH-HHHS
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc-cccc
Confidence 544322 122556999999999999999999999999999999999999999753321111111111111 1111
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCCC
Q 006968 530 KLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLA 582 (623)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~~~ 582 (623)
....+. .. .+.++.+++..||+.+|++||++.+|++.|++....
T Consensus 236 ~~~~l~-----~~----~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 236 SIEALC-----RG----YPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp CHHHHH-----TT----SCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cHHHHh-----cC----CcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 111110 11 236789999999999999999999999999875333
No 202
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=5.9e-40 Score=368.43 Aligned_cols=256 Identities=22% Similarity=0.361 Sum_probs=205.4
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC----CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 375 (623)
.++|.+.+.||+|+||.||+|.+. .+..||||.++..........|.+|+.++++++||||+++++++. ++..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 467888999999999999999874 256799999876544444567999999999999999999999985 467899
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
||||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 468 v~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp EEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred EEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 99999999999999753 34689999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... +...........
T Consensus 542 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-------~~~~~i~~~~~~--- 611 (656)
T 2j0j_A 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-------DVIGRIENGERL--- 611 (656)
T ss_dssp CC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHHTCCC---
T ss_pred CCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-------HHHHHHHcCCCC---
Confidence 5544333344557889999999998999999999999999999997 89998643221 112222111111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
..+...+..+.+++.+||..||++|||+.++++.|+..
T Consensus 612 -------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 612 -------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11223346789999999999999999999999999873
No 203
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.5e-39 Score=343.76 Aligned_cols=200 Identities=24% Similarity=0.324 Sum_probs=166.9
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecC-----Cc
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTE-----NE 372 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 372 (623)
.++|.+.+.||+|+||.||+|... +|+.||||+++..... .....+.+|+++++.++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 367999999999999999999875 5889999999754322 2345789999999999999999999999765 57
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccc
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla 452 (623)
.++||||++ |+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999986 699988865 34699999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCc---------------------eeecccccccccccccc-ccCCCCCccchhhHHHHHHHHHhCCCCCC
Q 006968 453 KLLDHRDSH---------------------VTTAVRGTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQRALD 507 (623)
Q Consensus 453 ~~~~~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~SlGvil~elltg~~p~~ 507 (623)
+........ ......||+.|+|||++ ....++.++||||+||++|||++|..|+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 876543211 22456799999999986 56679999999999999999998655543
No 204
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.6e-39 Score=336.90 Aligned_cols=260 Identities=20% Similarity=0.294 Sum_probs=205.6
Q ss_pred cCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccch----------------HHHHHHHHHHhhcCCCceeeee
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGE----------------VQFQTEVETISLAVHRNLLRLC 364 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~----------------~~~~~e~~~l~~l~H~niv~l~ 364 (623)
++|.+.+.||+|+||.||+|.. +|+.||||++......... ..+.+|+.++++++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 5788999999999999999999 9999999999754322211 6799999999999999999999
Q ss_pred eeeecCCceEEEEecccCCChhhh------hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeE
Q 006968 365 GFCSTENERLLVYPYMPNGSVASR------LRDHIHGRPALDWARRKRIALGTARGLLYLHE-QCDPKIIHRDVKAANIL 437 (623)
Q Consensus 365 ~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlk~~NIl 437 (623)
+++...+..++||||+++|+|.++ +... ....+++..++.++.|++.||+|||+ . +|+||||||+||+
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN--YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSS--SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc--cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 999999999999999999999998 4331 24579999999999999999999999 8 9999999999999
Q ss_pred ECCCCcEEEeecccccccCCCCCceeeccccccccccccccccC-CCCC-ccchhhHHHHHHHHHhCCCCCCcccccccc
Q 006968 438 LDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSE-KTDVFGFGILLLELITGQRALDFGRAANQR 515 (623)
Q Consensus 438 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~SlGvil~elltg~~p~~~~~~~~~~ 515 (623)
++.++.+||+|||.+...... ......||..|+|||.+.+. .++. ++||||||+++|||++|+.||......
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--- 258 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--- 258 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS---
T ss_pred EcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH---
Confidence 999999999999999876433 33445699999999999877 5665 999999999999999999999743221
Q ss_pred cchHHHHHHHhhcCcccccc------ccccC---CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 516 GVMLDWVKKLHQEGKLSQMV------DKDLK---GNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.+....... +....-. ..... .......+.++.+++.+||+.||.+|||+.|++++-
T Consensus 259 ---~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp 324 (348)
T 2pml_X 259 ---VELFNNIRT-KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324 (348)
T ss_dssp ---HHHHHHHTS-CCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred ---HHHHHHHhc-cCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 111122111 1110000 00000 000122346789999999999999999999999853
No 205
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.9e-39 Score=337.08 Aligned_cols=265 Identities=19% Similarity=0.278 Sum_probs=202.6
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecC-----Cce
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE-----NER 373 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~ 373 (623)
..+|.+.+.||+|+||.||+|... ++..||||+++..........+.+|++++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 357999999999999999999865 68899999997654444446789999999999999999999998654 368
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 106 ~iv~e~~~-~~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEcccC-cCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 99999997 5899888652 589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCce--eecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCc
Q 006968 454 LLDHRDSHV--TTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530 (623)
Q Consensus 454 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (623)
......... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+...... . ......
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~---~-~~~~~~ 252 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL---G-ILGSPS 252 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHH---H-HHCSCC
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHH---H-HhCCCC
Confidence 765332211 234569999999998754 458999999999999999999999997543322111111 0 000000
Q ss_pred c---cccc--------cc-ccCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 531 L---SQMV--------DK-DLKGNFD-----RIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 531 ~---~~~~--------~~-~~~~~~~-----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
. .... .. ......+ .....++.+++.+||+.||++|||+.|++++-.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 316 (364)
T 3qyz_A 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316 (364)
T ss_dssp HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 0 0000 00 0000000 112367899999999999999999999998643
No 206
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.1e-39 Score=350.77 Aligned_cols=253 Identities=25% Similarity=0.352 Sum_probs=206.3
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc--ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 376 (623)
.++|.+.+.||+|+||.||+|... +|+.||||++..... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 357889999999999999999976 789999999965433 23456799999999999999999999999999999999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE---CCCCcEEEeeccccc
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAK 453 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~Dfgla~ 453 (623)
|||+.+|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||+++
T Consensus 105 ~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 105 GEVYTGGELFDEIISR----KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp ECCCCSCBHHHHHHTC----SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 9999999999988753 4699999999999999999999999 99999999999999 567899999999998
Q ss_pred ccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 454 LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
....... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... .+.+..+.. +....
T Consensus 178 ~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~-~~~~~ 246 (484)
T 3nyv_A 178 HFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE-------YDILKKVEK-GKYTF 246 (484)
T ss_dssp HBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH-CCCCC
T ss_pred Ecccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHc-CCCCC
Confidence 7654332 334569999999999865 689999999999999999999999974322 111222221 11110
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.. +. ....+.++.+++.+||..||++|||+.|++++-
T Consensus 247 ~~-~~-----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 247 EL-PQ-----WKKVSESAKDLIRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp CS-GG-----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred CC-cc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhhCh
Confidence 00 00 012246789999999999999999999998754
No 207
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.4e-39 Score=339.54 Aligned_cols=265 Identities=25% Similarity=0.335 Sum_probs=200.6
Q ss_pred cCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeec--------C
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCST--------E 370 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--------~ 370 (623)
.+|.+.+.||+|+||.||+|.. .+|+.||||++...... .....+.+|+++++.++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5788999999999999999997 47899999998654432 234568899999999999999999999876 3
Q ss_pred CceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecc
Q 006968 371 NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFG 450 (623)
Q Consensus 371 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfg 450 (623)
+..++||||+++ +|.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ceEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 468999999975 777777643 34699999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCC---ceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHh
Q 006968 451 LAKLLDHRDS---HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLH 526 (623)
Q Consensus 451 la~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 526 (623)
+++.+..... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||........ ...+....
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~~~i~~~~ 245 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ----LALISQLC 245 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHH
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHHh
Confidence 9987653221 22234568999999999876 4579999999999999999999999975332111 11111111
Q ss_pred hcC---cccccccccc-------CC-CCC-HH------HHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 527 QEG---KLSQMVDKDL-------KG-NFD-RI------ELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 527 ~~~---~~~~~~~~~~-------~~-~~~-~~------~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
... .....-.... .. ... .. ....+.+++.+||..||++|||+.|++++-
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 313 (351)
T 3mi9_A 246 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 313 (351)
T ss_dssp CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCC
Confidence 100 0000000000 00 000 00 124688999999999999999999999863
No 208
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=8.4e-39 Score=348.39 Aligned_cols=253 Identities=24% Similarity=0.334 Sum_probs=204.0
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc-ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.++|.+.+.||+|+||+||+|... +|+.||||+++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 367999999999999999999975 689999999965432 234567899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC---CCCcEEEeecccccc
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKL 454 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~kl~Dfgla~~ 454 (623)
||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 101 e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 101 ELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp CCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 999999999988764 3689999999999999999999999 999999999999995 556799999999987
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
..... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... .+....+.. +.....
T Consensus 174 ~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~-~~~~~~ 242 (486)
T 3mwu_A 174 FQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-------YDILKRVET-GKYAFD 242 (486)
T ss_dssp BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH-TCCCSC
T ss_pred CCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHh-CCCCCC
Confidence 65432 2334569999999999875 589999999999999999999999964322 112222211 111100
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
. +. ....+.++.+++.+||..||++|||+.|++++-
T Consensus 243 ~-~~-----~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp 278 (486)
T 3mwu_A 243 L-PQ-----WRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278 (486)
T ss_dssp S-GG-----GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCH
T ss_pred C-cc-----cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCH
Confidence 0 00 011236789999999999999999999999863
No 209
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.1e-40 Score=346.25 Aligned_cols=255 Identities=10% Similarity=-0.001 Sum_probs=181.8
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc--cchHHHHHHHHHHhhc--CCCceeeee-------eeee
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA--GGEVQFQTEVETISLA--VHRNLLRLC-------GFCS 368 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l--~H~niv~l~-------~~~~ 368 (623)
.+|...+.||+|+||.||+|... +|+.||||+++..... .....+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45888999999999999999975 7899999999875432 2234577885544444 699988754 3333
Q ss_pred cC-----------------CceEEEEecccCCChhhhhhhccCCCCCCCHHHH------HHHHHHHHHHHHHHHhCCCCC
Q 006968 369 TE-----------------NERLLVYPYMPNGSVASRLRDHIHGRPALDWARR------KRIALGTARGLLYLHEQCDPK 425 (623)
Q Consensus 369 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~~L~~LH~~~~~~ 425 (623)
.. ...++||||++ |+|.+++.... ..+.+..+ ..++.|++.||+|||++ +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD---FVYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH---HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc---cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 22 33799999998 89999998642 23455555 78889999999999999 9
Q ss_pred eEecCCCCCCeEECCCCcEEEeecccccccCCCCCceeecccccccccccccccc--CCCCCccchhhHHHHHHHHHhCC
Q 006968 426 IIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELITGQ 503 (623)
Q Consensus 426 ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlGvil~elltg~ 503 (623)
|+||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~ 290 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999986542 2224457799999999987 67899999999999999999999
Q ss_pred CCCCcccccccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 504 RALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 504 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.||........... .....................+..+.+++.+||+.||++|||+.|++++
T Consensus 291 ~Pf~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 291 LPFGLVTPGIKGSW---------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp CSTTBCCTTCTTCC---------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCCCCcCcccccch---------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 99975422111000 0000000000111111112334789999999999999999999999764
No 210
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=324.17 Aligned_cols=253 Identities=20% Similarity=0.284 Sum_probs=200.7
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc---ccchHHHHHHHHHHhhcCCCceeeeeeeee--cCCce
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI---AGGEVQFQTEVETISLAVHRNLLRLCGFCS--TENER 373 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~ 373 (623)
.++|.+.+.||+|+||.||+|... ++..||||+++.... ......+.+|+++++.++||||+++++++. ..+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999975 688999999975432 234567999999999999999999999984 45678
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
++||||++++ |.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999877 777776532 34699999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC-CceeeccccccccccccccccCC--CCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCc
Q 006968 454 LLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ--SSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530 (623)
Q Consensus 454 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (623)
...... ........||+.|+|||.+.+.. .+.++||||||+++|||++|+.||..... ......... +.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~i~~-~~ 229 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-------YKLFENIGK-GS 229 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHH-CC
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-------HHHHHHHhc-CC
Confidence 765432 22334456999999999987644 37899999999999999999999974321 111122111 11
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 531 LSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
. . ++...+..+.+++.+||..||++|||+.|++++-
T Consensus 230 ~------~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 230 Y------A----IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp C------C----CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred C------C----CCCccCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 1 1 1122346788999999999999999999999853
No 211
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.1e-38 Score=348.89 Aligned_cols=253 Identities=23% Similarity=0.308 Sum_probs=201.8
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc------------cchHHHHHHHHHHhhcCCCceeeeeee
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA------------GGEVQFQTEVETISLAVHRNLLRLCGF 366 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------------~~~~~~~~e~~~l~~l~H~niv~l~~~ 366 (623)
.++|.+.+.||+|+||+||+|... ++..||||+++..... .....+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467999999999999999999975 5889999999764322 234578999999999999999999999
Q ss_pred eecCCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC---c
Q 006968 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF---E 443 (623)
Q Consensus 367 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~ 443 (623)
+...+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR----HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 99999999999999999999998764 3599999999999999999999999 999999999999999775 6
Q ss_pred EEEeecccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHH
Q 006968 444 AVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523 (623)
Q Consensus 444 ~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 523 (623)
+||+|||++....... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||..... .+...
T Consensus 188 ~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~ 257 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND-------QDIIK 257 (504)
T ss_dssp EEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHH
T ss_pred EEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHH
Confidence 9999999998765432 233456999999999986 4689999999999999999999999974322 11222
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 524 KLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.+.. +.... +.... ...+.++.+++.+||..||.+|||+.|++++-
T Consensus 258 ~i~~-~~~~~--~~~~~----~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~ 303 (504)
T 3q5i_A 258 KVEK-GKYYF--DFNDW----KNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303 (504)
T ss_dssp HHHH-CCCCC--CHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHHc-CCCCC--Ccccc----CCCCHHHHHHHHHHcCCChhHCCCHHHHhcCH
Confidence 2221 11100 00000 01236789999999999999999999998854
No 212
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=334.34 Aligned_cols=259 Identities=25% Similarity=0.368 Sum_probs=200.0
Q ss_pred HHHHHHHhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeeeeeeeec-
Q 006968 293 FKELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCST- 369 (623)
Q Consensus 293 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~- 369 (623)
+.++....++|.+.+.||+|+||.||+|... +|+.||||++.... .....+.+|+.++.++ +||||+++++++..
T Consensus 16 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred chhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 3344445678999999999999999999974 68999999986543 3356789999999998 79999999999976
Q ss_pred -----CCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcE
Q 006968 370 -----ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEA 444 (623)
Q Consensus 370 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 444 (623)
.+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCE
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCE
Confidence 467899999999999999998642 34689999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCceeeccccccccccccccc-----cCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchH
Q 006968 445 VVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVML 519 (623)
Q Consensus 445 kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~ 519 (623)
||+|||++........ ......||+.|+|||.+. +..++.++||||||+++|+|++|+.||......
T Consensus 169 kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------- 240 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------- 240 (326)
T ss_dssp EECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-------
T ss_pred EEeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-------
Confidence 9999999986543221 223446899999999987 567899999999999999999999999643221
Q ss_pred HHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 520 DWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
........ ....... ....+..+.+++.+||..||++|||+.+++++
T Consensus 241 ~~~~~~~~-~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 241 RALFLIPR-NPAPRLK--------SKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHHHHHH-SCCCCCS--------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhc-CccccCC--------ccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11111111 1111111 11123678999999999999999999999984
No 213
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.8e-39 Score=365.52 Aligned_cols=251 Identities=23% Similarity=0.288 Sum_probs=206.8
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc--ccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCceE
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERL 374 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~ 374 (623)
..++|.+.+.||+|+||.||+|... +++.||||++++... ......+..|..++..+ +||||+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4567999999999999999999975 588999999975432 23345678899999887 7999999999999999999
Q ss_pred EEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccc
Q 006968 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (623)
Q Consensus 375 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~ 454 (623)
+||||+++|+|..++... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 419 lV~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEeCcCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 999999999999999864 3699999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+.. ..
T Consensus 492 ~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-------~~~~~~i~~-~~---- 558 (674)
T 3pfq_A 492 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-------DELFQSIME-HN---- 558 (674)
T ss_dssp CCCTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHS-SC----
T ss_pred cccCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-------HHHHHHHHh-CC----
Confidence 43222 234556799999999999999999999999999999999999999974322 111122211 11
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKM-----SEVLKM 575 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~-----~evl~~ 575 (623)
..++...+.++.+++.+||..||++||++ .||+++
T Consensus 559 ------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 559 ------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp ------CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred ------CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 11223344778999999999999999997 777664
No 214
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=6.2e-40 Score=347.37 Aligned_cols=264 Identities=22% Similarity=0.304 Sum_probs=195.7
Q ss_pred cCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCc------eE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENE------RL 374 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~------~~ 374 (623)
.+|.+.+.||+|+||.||+|...++..||+|++..... ...+|+++++.++||||+++++++...+. .+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 46888999999999999999988777799998864321 23479999999999999999999855433 78
Q ss_pred EEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC-CCCcEEEeeccccc
Q 006968 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD-EDFEAVVGDFGLAK 453 (623)
Q Consensus 375 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~kl~Dfgla~ 453 (623)
+||||++++ +...+.........+++..++.++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+++
T Consensus 115 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 999999765 4444443323345799999999999999999999999 999999999999999 79999999999998
Q ss_pred ccCCCCCceeeccccccccccccccccC-CCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHH--------HHH
Q 006968 454 LLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDW--------VKK 524 (623)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~--------~~~ 524 (623)
....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||......+........ +..
T Consensus 191 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 191 ILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp ECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred cccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 7644332 2345689999999998764 5899999999999999999999999754322111111110 000
Q ss_pred Hhhc---CccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 525 LHQE---GKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 525 ~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.... ..........+...+....+.++.+++.+||..||++|||+.|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0000 00000000000001112234689999999999999999999999986
No 215
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.3e-39 Score=336.22 Aligned_cols=274 Identities=22% Similarity=0.268 Sum_probs=194.9
Q ss_pred HHHHHHhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCc
Q 006968 294 KELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENE 372 (623)
Q Consensus 294 ~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 372 (623)
.+.....++|.+.+.||+|+||.||+|... +|..||||++.... .....+.++++.+..++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP--RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT--TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc--cccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 345667789999999999999999999975 68999999986543 223456788888899999999999999865433
Q ss_pred -------eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--hCCCCCeEecCCCCCCeEECC-CC
Q 006968 373 -------RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH--EQCDPKIIHRDVKAANILLDE-DF 442 (623)
Q Consensus 373 -------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--~~~~~~ivH~Dlk~~NIll~~-~~ 442 (623)
.++||||+++ +|...+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence 7899999975 666666554445667999999999999999999999 77 9999999999999996 89
Q ss_pred cEEEeecccccccCCCCCceeeccccccccccccccccC-CCCCccchhhHHHHHHHHHhCCCCCCcccccccccchH--
Q 006968 443 EAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVML-- 519 (623)
Q Consensus 443 ~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~-- 519 (623)
.+||+|||+++....... .....||+.|+|||++.+. .++.++||||||+++|||++|+.||.............
T Consensus 170 ~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~ 247 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247 (360)
T ss_dssp EEEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred cEEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHH
Confidence 999999999987654332 2345689999999998664 48999999999999999999999997543221111110
Q ss_pred ------HHHHHHhhcCccccccccc------cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 520 ------DWVKKLHQEGKLSQMVDKD------LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 520 ------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.+..............+.. .........+.++.+++.+||+.||++|||+.|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1111111000000000000 0011112245789999999999999999999999875
No 216
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.1e-38 Score=348.09 Aligned_cols=252 Identities=22% Similarity=0.345 Sum_probs=199.6
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc-ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.++|.+.+.||+|+||.||+|... ++..||||+++.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 356889999999999999999975 689999999976543 233557899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC---CCcEEEeecccccc
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE---DFEAVVGDFGLAKL 454 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~Dfgla~~ 454 (623)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||++..
T Consensus 116 e~~~~g~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEIIHR----MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 999999999988764 3589999999999999999999999 9999999999999976 45599999999987
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccccc
Q 006968 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQM 534 (623)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (623)
..... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||..... .+......... .. .
T Consensus 189 ~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~-~~-~ 256 (494)
T 3lij_A 189 FENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD-------QEILRKVEKGK-YT-F 256 (494)
T ss_dssp CBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-CC-C
T ss_pred CCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCC-CC-C
Confidence 65432 233456999999999886 5689999999999999999999999974322 11222222111 10 0
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 535 VDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
..+.. ...+.++.+++.+||..||.+|||+.|++++
T Consensus 257 ~~~~~-----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 257 DSPEW-----KNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp CSGGG-----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred Cchhc-----ccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 00000 1123678999999999999999999999875
No 217
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.1e-39 Score=344.84 Aligned_cols=262 Identities=25% Similarity=0.333 Sum_probs=197.0
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecC----C--ce
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE----N--ER 373 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~----~--~~ 373 (623)
.+|...+.||+|+||.||+|... +|+.||||++.... ..+.+|+++++.++||||+++++++... + ..
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 35788899999999999999985 58999999986532 2235799999999999999999988532 1 25
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC-CcEEEeecccc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED-FEAVVGDFGLA 452 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~kl~Dfgla 452 (623)
++||||+++ ++.+.+.........+++..++.++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhh
Confidence 799999975 67666665434456799999999999999999999999 99999999999999965 56899999999
Q ss_pred cccCCCCCceeeccccccccccccccccC-CCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHh-----
Q 006968 453 KLLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLH----- 526 (623)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~----- 526 (623)
+.+..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+. +...++...
T Consensus 205 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~---l~~i~~~lg~p~~~ 279 (420)
T 1j1b_A 205 KQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVLGTPTRE 279 (420)
T ss_dssp EECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCSCCHH
T ss_pred hhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHH
Confidence 87654322 2345689999999998764 789999999999999999999999975432211 111111100
Q ss_pred ----hcCccccccccccCC-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 527 ----QEGKLSQMVDKDLKG-----NFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 527 ----~~~~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
......+...+.+.. .+....+.++.+++.+||..||++|||+.|++++-
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp 338 (420)
T 1j1b_A 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338 (420)
T ss_dssp HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCH
Confidence 001111111111100 01122346799999999999999999999998754
No 218
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5.4e-39 Score=337.59 Aligned_cols=265 Identities=20% Similarity=0.242 Sum_probs=193.3
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCC------c
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTEN------E 372 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~ 372 (623)
++|.+.+.||+|+||.||+|... +++.||||+++..... .....+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 57889999999999999999865 6899999999754322 23456889999999999999999999997654 6
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccc
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla 452 (623)
.++||||++ |+|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 174 (371)
T ss_dssp EEEEEECCS-EEHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred eEEEEEcCC-CCHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecc
Confidence 799999997 477777753 488999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchH--------H----
Q 006968 453 KLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVML--------D---- 520 (623)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~--------~---- 520 (623)
+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||............. +
T Consensus 175 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 175 RTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred cccccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 865432 12334568999999999999999999999999999999999999997533211100000 0
Q ss_pred ---HHHHHhhc-Ccc-----ccccccccCCC---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 521 ---WVKKLHQE-GKL-----SQMVDKDLKGN---FDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 521 ---~~~~~~~~-~~~-----~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
.+...... ... ........... .......++.+++.+||..||++|||+.|++++-.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 321 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 321 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcc
Confidence 00000000 000 00000000000 01233578999999999999999999999998643
No 219
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.6e-39 Score=332.26 Aligned_cols=254 Identities=24% Similarity=0.327 Sum_probs=197.5
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc-------cchHHHHHHHHHHhhcCCCceeeeeeeeecCC
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-------GGEVQFQTEVETISLAVHRNLLRLCGFCSTEN 371 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 371 (623)
.++|.+.+.||+|+||.||+|... +++.||||+++..... .....+.+|++++++++||||+++++++..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 467999999999999999999875 5889999998654321 12335889999999999999999999987654
Q ss_pred ceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCc---EEEee
Q 006968 372 ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE---AVVGD 448 (623)
Q Consensus 372 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~D 448 (623)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 8999999999999998864 34689999999999999999999999 9999999999999987654 99999
Q ss_pred cccccccCCCCCceeeccccccccccccccc---cCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHH
Q 006968 449 FGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKL 525 (623)
Q Consensus 449 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 525 (623)
||++...... .......||+.|+|||++. ...++.++||||||+++|+|++|+.||....... .....+.
T Consensus 161 fg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~-- 233 (322)
T 2ycf_A 161 FGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---SLKDQIT-- 233 (322)
T ss_dssp CTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS---CHHHHHH--
T ss_pred Cccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH---HHHHHHH--
Confidence 9999876432 2223456899999999974 5678899999999999999999999996432211 1111111
Q ss_pred hhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 526 HQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.+.... .+.... ..+.++.+++.+||..||++|||+.+++++-
T Consensus 234 --~~~~~~--~~~~~~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~ 276 (322)
T 2ycf_A 234 --SGKYNF--IPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRHP 276 (322)
T ss_dssp --HTCCCC--CHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred --hCcccc--Cchhhh----hcCHHHHHHHHHHcccCHhhCCCHHHHhhCc
Confidence 111100 000001 1236789999999999999999999998753
No 220
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.5e-39 Score=332.68 Aligned_cols=266 Identities=23% Similarity=0.327 Sum_probs=202.6
Q ss_pred HhcCCCcCCceeccCCeEEEEEEe--CCCcEEEEEEeccccccc-chHHHHHHHHHHhhc---CCCceeeeeeeee----
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCF--SDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA---VHRNLLRLCGFCS---- 368 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l---~H~niv~l~~~~~---- 368 (623)
+.++|.+.+.||+|+||.||+|.. .+|+.||||+++...... ....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 357899999999999999999997 368899999997543222 233577888887766 8999999999987
Q ss_pred -cCCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEe
Q 006968 369 -TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVG 447 (623)
Q Consensus 369 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~ 447 (623)
.....++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 5567899999997 69999997642 33589999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhh
Q 006968 448 DFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQ 527 (623)
Q Consensus 448 Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 527 (623)
|||+++..... .......||..|+|||.+.+..++.++||||||+++|||++|+.||........ ....+.....
T Consensus 163 Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~ 237 (326)
T 1blx_A 163 DFGLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ---LGKILDVIGL 237 (326)
T ss_dssp SCCSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCC
T ss_pred cCcccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH---HHHHHHHcCC
Confidence 99999865432 123345689999999999999999999999999999999999999974332111 0011111000
Q ss_pred c--Ccccc-------ccccc---cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 528 E--GKLSQ-------MVDKD---LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 528 ~--~~~~~-------~~~~~---~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
. ..... ..... ....+....+..+.+++.+||..||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0 00000 00000 0001112234678999999999999999999999875
No 221
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.6e-39 Score=332.95 Aligned_cols=258 Identities=24% Similarity=0.302 Sum_probs=181.3
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHH-HHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVE-TISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~-~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
++|...+.||+|+||.||+|... +|+.||||+++.........++..|+. +++.++||||+++++++...+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 67888999999999999999985 689999999976544344455666666 6778899999999999999999999999
Q ss_pred cccCCChhhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 379 YMPNGSVASRLRDHI-HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
|+++ +|.+++.... .....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9975 7877776421 12457899999999999999999999852 899999999999999999999999999986643
Q ss_pred CCCceeecccccccccccccc----ccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYL----STGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
.. ......||+.|+|||.+ .+..++.++||||||+++|||++|+.||........ .+ .....
T Consensus 179 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~------~~~~~ 244 (327)
T 3aln_A 179 SI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD------QL------TQVVK 244 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------------CCCCC
T ss_pred cc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH------HH------HHHhc
Confidence 32 12233589999999998 456789999999999999999999999964221100 00 00000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
...+.+........+.++.+++.+||..||++|||+.+++++
T Consensus 245 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 245 GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp SCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 011111111112234679999999999999999999999763
No 222
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=4.8e-39 Score=344.22 Aligned_cols=198 Identities=21% Similarity=0.250 Sum_probs=171.3
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhc------CCCceeeeeeeeecCCce
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLA------VHRNLLRLCGFCSTENER 373 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l------~H~niv~l~~~~~~~~~~ 373 (623)
.+|.+.+.||+|+||.||+|... +++.||||+++... ....++.+|+.+++.+ .|+||+++++++...+..
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc--chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 56889999999999999999875 58999999997532 2234677888888776 577999999999999999
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCc--EEEeeccc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE--AVVGDFGL 451 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~--~kl~Dfgl 451 (623)
++||||+. ++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEeccC-CCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 99999995 69999987642 34589999999999999999999999 9999999999999999887 99999999
Q ss_pred ccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCccc
Q 006968 452 AKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGR 510 (623)
Q Consensus 452 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~ 510 (623)
+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 249 a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 249 SCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp CEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 9764432 234568999999999999999999999999999999999999997543
No 223
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2e-38 Score=322.73 Aligned_cols=253 Identities=23% Similarity=0.291 Sum_probs=204.1
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccc--------cchHHHHHHHHHHhhcC-CCceeeeeeeeec
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA--------GGEVQFQTEVETISLAV-HRNLLRLCGFCST 369 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~ 369 (623)
.++|.+.+.||+|+||.||+|... +|+.||||+++..... .....+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467899999999999999999975 6899999999654311 12346889999999996 9999999999999
Q ss_pred CCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeec
Q 006968 370 ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDF 449 (623)
Q Consensus 370 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Df 449 (623)
.+..++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 99999999999999999999763 4689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCceeeccccccccccccccc------cCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHH
Q 006968 450 GLAKLLDHRDSHVTTAVRGTVGHIAPEYLS------TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523 (623)
Q Consensus 450 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 523 (623)
|++....... ......|++.|+|||.+. ...++.++||||||+++|||++|+.||..... .....
T Consensus 169 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~ 239 (298)
T 1phk_A 169 GFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-------MLMLR 239 (298)
T ss_dssp TTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHH
T ss_pred cchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH-------HHHHH
Confidence 9998765432 233456899999999885 45678999999999999999999999864321 11111
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 524 KLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.... +.... ........+.++.+++.+||..||++|||+.|++++
T Consensus 240 ~~~~-~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 240 MIMS-GNYQF------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHHH-TCCCC------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHhc-CCccc------CcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 1111 11100 000011234678999999999999999999999874
No 224
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=330.39 Aligned_cols=257 Identities=24% Similarity=0.389 Sum_probs=200.1
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccc-cchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
..++|.+.+.||+|+||.||+|...+ .||+|+++..... .....+.+|+.++++++||||+++++++...+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35678899999999999999998753 4999998754322 23346888999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||++.....
T Consensus 109 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp BCCCSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred ecccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 999999999999753 34689999999999999999999999 999999999999998 67999999999876532
Q ss_pred CC----Cceeecccccccccccccccc---------CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHH
Q 006968 458 RD----SHVTTAVRGTVGHIAPEYLST---------GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524 (623)
Q Consensus 458 ~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 524 (623)
.. ........||+.|+|||.+.. ..++.++||||||+++|||++|+.||...... .....
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~ 254 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-------AIIWQ 254 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-------HHHHH
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHH
Confidence 11 112233458999999999864 35788999999999999999999999643221 11111
Q ss_pred HhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCC
Q 006968 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDG 580 (623)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~~ 580 (623)
.. .+........ ..+.++.+++.+||..||++|||+.++++.|+...
T Consensus 255 ~~-~~~~~~~~~~--------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 255 MG-TGMKPNLSQI--------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp HH-TTCCCCCCCS--------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred hc-cCCCCCCCcC--------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 11 1111111111 12356889999999999999999999999998843
No 225
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=4.4e-39 Score=335.84 Aligned_cols=265 Identities=22% Similarity=0.313 Sum_probs=200.6
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecC-----Cce
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE-----NER 373 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~ 373 (623)
.++|.+.+.||+|+||.||+|... +|+.||||+++..........+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 367889999999999999999975 68999999997554444455788999999999999999999988654 678
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 99999997 689888875 2589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc---------eeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHH
Q 006968 454 LLDHRDSH---------VTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523 (623)
Q Consensus 454 ~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 523 (623)
........ ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||........ ...+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~ 236 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ----LLLIF 236 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHH
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH----HHHHH
Confidence 76532211 1223468999999998754 6789999999999999999999999974332111 00000
Q ss_pred HHhhcCc----cccccc-------cccC--CC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 524 KLHQEGK----LSQMVD-------KDLK--GN-----FDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 524 ~~~~~~~----~~~~~~-------~~~~--~~-----~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
....... ...... ..+. .. .....+.++.+++.+||..||++|||+.|++++-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 308 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence 0000000 000000 0000 00 00122467899999999999999999999998543
No 226
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.8e-39 Score=337.07 Aligned_cols=259 Identities=22% Similarity=0.269 Sum_probs=183.2
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc-ccchHHHHHHHHHHhhcCCCceeeeeeeeecC------Cc
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTE------NE 372 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~~ 372 (623)
++|.+.+.||+|+||.||+|... +|+.||||+++.... ......+.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 67889999999999999999864 689999999965432 22345688999999999999999999998654 56
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccc
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla 452 (623)
.++|+||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 109 ~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a 179 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179 (367)
T ss_dssp CEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC----
T ss_pred EEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccc
Confidence 79999999 7898888764 3699999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCc-
Q 006968 453 KLLDHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK- 530 (623)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 530 (623)
+..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.......... .+........
T Consensus 180 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~----~i~~~~g~p~~ 251 (367)
T 2fst_X 180 RHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK----LILRLVGTPGA 251 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH----HHHHHHCSCCH
T ss_pred cccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----HHHHHhCCCCH
Confidence 865432 234568999999999877 678999999999999999999999997543211111 0000000000
Q ss_pred --cccccc-------cccC--CCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 531 --LSQMVD-------KDLK--GNFD-----RIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 531 --~~~~~~-------~~~~--~~~~-----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
...+.. ..+. .... ......+.+++.+||..||++|||+.|++++-
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp 313 (367)
T 2fst_X 252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313 (367)
T ss_dssp HHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcCh
Confidence 000000 0000 0000 01236689999999999999999999999864
No 227
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=8.6e-39 Score=338.97 Aligned_cols=264 Identities=20% Similarity=0.241 Sum_probs=201.8
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcC--------CCceeeeeeeee---
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAV--------HRNLLRLCGFCS--- 368 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~~~~~--- 368 (623)
++|.+.+.||+|+||.||+|... +++.||||+++... .....+.+|+.+++.++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE--HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC--cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 67999999999999999999864 68899999997432 23456889999999885 788999999987
Q ss_pred -cCCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCC-----
Q 006968 369 -TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF----- 442 (623)
Q Consensus 369 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----- 442 (623)
.....++||||+ ++++.+++... ....+++..++.++.|++.||+|||+++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhh
Confidence 556789999999 66776666543 2346999999999999999999999964 899999999999999775
Q ss_pred --------------------------------------------cEEEeecccccccCCCCCceeecccccccccccccc
Q 006968 443 --------------------------------------------EAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL 478 (623)
Q Consensus 443 --------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~ 478 (623)
.+||+|||++...... .....||+.|+|||++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHH
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhh
Confidence 7999999999876432 2334689999999999
Q ss_pred ccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccch--HHHHHHHhh--------cCcc-ccccccc---------
Q 006968 479 STGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVM--LDWVKKLHQ--------EGKL-SQMVDKD--------- 538 (623)
Q Consensus 479 ~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~--~~~~~~~~~--------~~~~-~~~~~~~--------- 538 (623)
.+..++.++|||||||++|||++|+.||............ ...+..... .+.. .......
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 9999999999999999999999999999753322111000 011111000 0000 0000000
Q ss_pred ----------cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 539 ----------LKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 539 ----------~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
-....+......+.+++.+||+.||++|||+.|++++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0012356677889999999999999999999999875
No 228
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=5.4e-39 Score=329.51 Aligned_cols=254 Identities=20% Similarity=0.283 Sum_probs=197.7
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccc-cchHHHHHHHHHHhhcC--CCceeeeeeeeecCCceEE
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAV--HRNLLRLCGFCSTENERLL 375 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~l 375 (623)
..++|.+.+.||+|+||.||+|...+++.||||+++..... .....+.+|++++.+++ ||||+++++++...+..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 34678899999999999999999988999999999754322 23457899999999997 5999999999999999999
Q ss_pred EEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccccc
Q 006968 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~ 455 (623)
||| +.+++|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||++++ +.+||+|||++...
T Consensus 106 v~e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQM 176 (313)
T ss_dssp EEC-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred EEe-cCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccc
Confidence 999 5688999999763 4689999999999999999999999 9999999999999964 79999999999876
Q ss_pred CCCCCc-eeecccccccccccccccc-----------CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHH
Q 006968 456 DHRDSH-VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVK 523 (623)
Q Consensus 456 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 523 (623)
...... ......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||..... ....+.
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~ 250 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLH 250 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHH
T ss_pred cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH------HHHHHH
Confidence 543222 2234468999999999875 4678899999999999999999999963221 111111
Q ss_pred HHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 524 KLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
... +......++...+.++.+++.+||+.||++|||+.|++++-
T Consensus 251 ~~~---------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 251 AII---------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp HHH---------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHH---------hcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 111 11111112222246789999999999999999999998854
No 229
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.2e-38 Score=333.02 Aligned_cols=260 Identities=21% Similarity=0.277 Sum_probs=195.9
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-chHHHHHHHHHHhhcCCCceeeeeeeeecCCce-----
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENER----- 373 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~----- 373 (623)
++|.+.+.||+|+||.||+|... +|+.||||+++...... ....+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 57888999999999999999875 68999999997543222 245688999999999999999999999877654
Q ss_pred -EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccc
Q 006968 374 -LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (623)
Q Consensus 374 -~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla 452 (623)
++||||+. ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 122 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a 191 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 191 (371)
T ss_dssp CEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred EEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence 99999997 677777642 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcC--
Q 006968 453 KLLDHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEG-- 529 (623)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 529 (623)
+..... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||......... ...........
T Consensus 192 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~~i~~~~~~~~~~ 264 (371)
T 4exu_A 192 RHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL---TQILKVTGVPGTE 264 (371)
T ss_dssp ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCCCCHH
T ss_pred cccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHhCCCcHH
Confidence 865432 234568999999999877 68899999999999999999999999743321110 01100000000
Q ss_pred ---ccc--------cccccccCCCC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 530 ---KLS--------QMVDKDLKGNF---DRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 530 ---~~~--------~~~~~~~~~~~---~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
... ..+.......+ ......++.+++.+||+.||++|||+.|++++-.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 326 (371)
T 4exu_A 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326 (371)
T ss_dssp HHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred HHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcc
Confidence 000 00000000000 0112467899999999999999999999998644
No 230
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.4e-38 Score=324.21 Aligned_cols=253 Identities=26% Similarity=0.390 Sum_probs=194.7
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeec---------
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCST--------- 369 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--------- 369 (623)
.++|++.+.||+|+||.||+|... +|+.||||+++... .....+.+|+.++++++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH--HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 457889999999999999999974 78999999996432 334578999999999999999999998754
Q ss_pred ----CCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEE
Q 006968 370 ----ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV 445 (623)
Q Consensus 370 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 445 (623)
.+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEE
Confidence 35678999999999999999763 34678899999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCC-------------CceeeccccccccccccccccC-CCCCccchhhHHHHHHHHHhCCCCCCcccc
Q 006968 446 VGDFGLAKLLDHRD-------------SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFGRA 511 (623)
Q Consensus 446 l~Dfgla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~SlGvil~elltg~~p~~~~~~ 511 (623)
|+|||++....... ........||+.|+|||.+.+. .++.++||||||+++|||++ |+.....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~ 233 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME 233 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh
Confidence 99999998664321 1122344589999999999764 68999999999999999998 4432111
Q ss_pred cccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 512 ANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
.......... . ...+...++...+..+.+++.+||+.||++|||+.+++++-
T Consensus 234 ------~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 234 ------RVNILKKLRS-V------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp ------HHHHHHHHHS-T------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred ------HHHHHHhccc-c------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 1111121111 0 11112223333456789999999999999999999999864
No 231
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.1e-39 Score=340.00 Aligned_cols=269 Identities=20% Similarity=0.258 Sum_probs=184.2
Q ss_pred CCCc-CCceeccCCeEEEEEEeC---CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeee--cCCceEE
Q 006968 302 NFSA-KNILGRGGFGIVYKGCFS---DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS--TENERLL 375 (623)
Q Consensus 302 ~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~~l 375 (623)
.|.+ .++||+|+||.||+|... ++..||||+++... ....+.+|+.++++++||||+++++++. .....++
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS---CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC---CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 3554 458999999999999965 57899999997543 2346889999999999999999999994 4678899
Q ss_pred EEecccCCChhhhhhhcc-----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE----CCCCcEEE
Q 006968 376 VYPYMPNGSVASRLRDHI-----HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL----DEDFEAVV 446 (623)
Q Consensus 376 v~e~~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~kl 446 (623)
||||++ |+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||
T Consensus 98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 999996 57888776421 1123599999999999999999999999 99999999999999 67889999
Q ss_pred eecccccccCCCCC--ceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCccccccc--ccchHHH
Q 006968 447 GDFGLAKLLDHRDS--HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQ--RGVMLDW 521 (623)
Q Consensus 447 ~Dfgla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~--~~~~~~~ 521 (623)
+|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .....+.
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 99999987654322 22334569999999999987 4589999999999999999999999964332100 0000011
Q ss_pred HHHHhh-cC-----cccccc------------ccccCCCCCH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006968 522 VKKLHQ-EG-----KLSQMV------------DKDLKGNFDR---------IELEEMVQVALLCTQFNPLHRPKMSEVLK 574 (623)
Q Consensus 522 ~~~~~~-~~-----~~~~~~------------~~~~~~~~~~---------~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 574 (623)
+..+.. -+ ....+. .......... ....++.+++.+||..||++|||+.|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 111100 00 000000 0000000000 01356889999999999999999999998
Q ss_pred Hhh
Q 006968 575 MLE 577 (623)
Q Consensus 575 ~L~ 577 (623)
+-.
T Consensus 334 hp~ 336 (405)
T 3rgf_A 334 DPY 336 (405)
T ss_dssp SGG
T ss_pred Chh
Confidence 654
No 232
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=7.8e-38 Score=316.77 Aligned_cols=253 Identities=24% Similarity=0.328 Sum_probs=203.8
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccc-ccchHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEE
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 376 (623)
..++|.+.+.||+|+||.||+|... +++.||||+++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4467999999999999999999975 689999999975433 23456789999999999999999999999999999999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC---CcEEEeeccccc
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED---FEAVVGDFGLAK 453 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~kl~Dfgla~ 453 (623)
+||+++++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||++.
T Consensus 100 ~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 100 GELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp ECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 9999999999988753 3589999999999999999999999 99999999999999754 479999999998
Q ss_pred ccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 454 LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
....... .....||+.|+|||.+.+ .++.++||||||+++|+|++|+.||..... .+....... +....
T Consensus 173 ~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~-~~~~~ 241 (287)
T 2wei_A 173 CFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-------YDILKRVET-GKYAF 241 (287)
T ss_dssp TBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH-CCCCC
T ss_pred eecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHc-CCCCC
Confidence 7654322 223458999999998865 489999999999999999999999964322 112222221 11110
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
.. ... ...+.++.+++.+||..||++|||+.|++++
T Consensus 242 ~~--~~~----~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 242 DL--PQW----RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp CS--GGG----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred Cc--hhh----hhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 00 000 1123678999999999999999999999984
No 233
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=6.1e-38 Score=324.83 Aligned_cols=259 Identities=19% Similarity=0.276 Sum_probs=202.2
Q ss_pred cCCCcCCceeccCCeEEEEEEe--CCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCc------eeeeeeeeecCCc
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF--SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN------LLRLCGFCSTENE 372 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~~~ 372 (623)
++|.+.+.||+|+||.||+|.. .+++.||||+++... .....+.+|+++++.++|++ ++++++++...+.
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 5788999999999999999986 368899999997532 23456888999998887654 9999999999999
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC------------
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE------------ 440 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~------------ 440 (623)
.++||||+ +++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----
T ss_pred EEEEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccc
Confidence 99999999 89999999764 234689999999999999999999999 9999999999999987
Q ss_pred -------CCcEEEeecccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccc
Q 006968 441 -------DFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAAN 513 (623)
Q Consensus 441 -------~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~ 513 (623)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||.......
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 241 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred cccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 668999999999864432 234568999999999999999999999999999999999999997543221
Q ss_pred cccchHHHHHHHhh--------cCcccccc---------------------ccc-cCCCCCHHHHHHHHHHHHHccCCCC
Q 006968 514 QRGVMLDWVKKLHQ--------EGKLSQMV---------------------DKD-LKGNFDRIELEEMVQVALLCTQFNP 563 (623)
Q Consensus 514 ~~~~~~~~~~~~~~--------~~~~~~~~---------------------~~~-~~~~~~~~~~~~l~~l~~~cl~~~P 563 (623)
.. ..+..... ........ .+. -..........++.+++.+||+.||
T Consensus 242 ~~----~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 317 (339)
T 1z57_A 242 HL----AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317 (339)
T ss_dssp HH----HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred HH----HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence 11 11111000 00000000 000 0001133456789999999999999
Q ss_pred CCCCCHHHHHHH
Q 006968 564 LHRPKMSEVLKM 575 (623)
Q Consensus 564 ~~RPs~~evl~~ 575 (623)
++|||+.|++++
T Consensus 318 ~~Rpt~~ell~h 329 (339)
T 1z57_A 318 AKRITLREALKH 329 (339)
T ss_dssp TTSCCHHHHTTS
T ss_pred ccccCHHHHhcC
Confidence 999999999875
No 234
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=6.7e-38 Score=327.07 Aligned_cols=258 Identities=21% Similarity=0.274 Sum_probs=196.1
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-chHHHHHHHHHHhhcCCCceeeeeeeeecCCc------
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENE------ 372 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~------ 372 (623)
++|.+.+.||+|+||.||+|... +|+.||||+++...... ....+.+|+.+++.++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 57888899999999999999975 68999999997543222 23568899999999999999999999977654
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccc
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla 452 (623)
.++||||++ ++|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred EEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccc
Confidence 499999997 687777642 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhc---
Q 006968 453 KLLDHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQE--- 528 (623)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 528 (623)
+..... .....||+.|+|||.+.+ ..++.++||||||+++|||++|+.||........ .....+.....
T Consensus 174 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~ 246 (353)
T 3coi_A 174 RHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVPGTE 246 (353)
T ss_dssp TC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH---HHHHHHHHCBCCHH
T ss_pred cCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHH
Confidence 865422 234468999999999877 6789999999999999999999999974332111 00111000000
Q ss_pred --------------CccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 529 --------------GKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 529 --------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
..........+. ......+.++.+++.+||..||++|||+.|++++-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp 307 (353)
T 3coi_A 247 FVQKLNDKAAKSYIQSLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 307 (353)
T ss_dssp HHTTCSCHHHHHHHHTSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred HHHHHhhHHHHHHHHhCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 000000001111 11123357899999999999999999999998864
No 235
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.2e-38 Score=331.82 Aligned_cols=265 Identities=19% Similarity=0.255 Sum_probs=200.4
Q ss_pred cCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEecccccccchHHHHHHHHHHhhcC-----------CCceeeeeeeee
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-----------HRNLLRLCGFCS 368 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~~~~~ 368 (623)
.+|.+.+.||+|+||.||+|.. .+++.||||+++... .....+.+|+.+++++. ||||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 5788999999999999999996 468999999997432 23456888999998876 899999999987
Q ss_pred cCC----ceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC-----
Q 006968 369 TEN----ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD----- 439 (623)
Q Consensus 369 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~----- 439 (623)
..+ ..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+++ +|+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCC
Confidence 644 689999999 899999997643 345899999999999999999999953 899999999999994
Q ss_pred -CCCcEEEeecccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccch
Q 006968 440 -EDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVM 518 (623)
Q Consensus 440 -~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~ 518 (623)
..+.+||+|||++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||............
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred cCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4458999999999876432 23346899999999999999999999999999999999999999743321111100
Q ss_pred HHHHHHHhhcCcccc-----------ccc----------c---------ccCCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 006968 519 LDWVKKLHQEGKLSQ-----------MVD----------K---------DLKGNFDRIELEEMVQVALLCTQFNPLHRPK 568 (623)
Q Consensus 519 ~~~~~~~~~~~~~~~-----------~~~----------~---------~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs 568 (623)
..........+.... .+. . .-...++...+.++.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 000000000010000 000 0 0011345677889999999999999999999
Q ss_pred HHHHHHHh
Q 006968 569 MSEVLKML 576 (623)
Q Consensus 569 ~~evl~~L 576 (623)
+.|++++-
T Consensus 328 ~~ell~hp 335 (373)
T 1q8y_A 328 AGGLVNHP 335 (373)
T ss_dssp HHHHHTCG
T ss_pred HHHHhhCh
Confidence 99998853
No 236
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=324.74 Aligned_cols=262 Identities=23% Similarity=0.304 Sum_probs=191.4
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeee-----------
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS----------- 368 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~----------- 368 (623)
++|.+.+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 57888999999999999999986 48999999986543 233457899999999999999999998873
Q ss_pred ---cCCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC-CCCcE
Q 006968 369 ---TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD-EDFEA 444 (623)
Q Consensus 369 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~ 444 (623)
..+..++||||++ |+|.+++.. ..+++..++.++.|++.||+|||+. +|+||||||+||+++ +++.+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeE
Confidence 3467899999997 699988864 3689999999999999999999999 999999999999997 56799
Q ss_pred EEeecccccccCCCCC--ceeecccccccccccccccc-CCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHH
Q 006968 445 VVGDFGLAKLLDHRDS--HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDW 521 (623)
Q Consensus 445 kl~Dfgla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~ 521 (623)
||+|||+++....... .......+|..|+|||.+.+ ..++.++||||||+++|||++|+.||......... ...
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~ 237 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQM---QLI 237 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHH
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHH---HHH
Confidence 9999999987643221 12233457899999998865 67899999999999999999999999754321110 000
Q ss_pred HHHHh---------hcCccccccccccCC-CC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 522 VKKLH---------QEGKLSQMVDKDLKG-NF-----DRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 522 ~~~~~---------~~~~~~~~~~~~~~~-~~-----~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
..... ............... .. ....+.++.+++.+||+.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00000 000000000000000 00 01124678999999999999999999999874
No 237
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2e-38 Score=340.00 Aligned_cols=254 Identities=24% Similarity=0.288 Sum_probs=188.6
Q ss_pred CCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCceEEEEecc
Q 006968 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVYPYM 380 (623)
Q Consensus 302 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~ 380 (623)
.|...+.||+|+||+||.+...+|+.||||++.... ...+.+|++++.++ +||||+++++++...+..++||||+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 345568899999999987766689999999986532 34678999999876 8999999999999999999999999
Q ss_pred cCCChhhhhhhccCCCCC---CCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCC-------------CcE
Q 006968 381 PNGSVASRLRDHIHGRPA---LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED-------------FEA 444 (623)
Q Consensus 381 ~~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-------------~~~ 444 (623)
. |+|.+++......... .++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 5 6999999764322111 23445678999999999999999 99999999999999654 489
Q ss_pred EEeecccccccCCCCCc---eeecccccccccccccccc-------CCCCCccchhhHHHHHHHHHh-CCCCCCcccccc
Q 006968 445 VVGDFGLAKLLDHRDSH---VTTAVRGTVGHIAPEYLST-------GQSSEKTDVFGFGILLLELIT-GQRALDFGRAAN 513 (623)
Q Consensus 445 kl~Dfgla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~ 513 (623)
||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 99999999877643322 1234569999999999965 578999999999999999999 899986322110
Q ss_pred cccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 514 QRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
..... ..... +..........+.++.+++.+||+.||++|||+.+++++-
T Consensus 248 -----~~i~~---~~~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp 297 (434)
T 2rio_A 248 -----SNIIR---GIFSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297 (434)
T ss_dssp -----HHHHH---TCCCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred -----HHHhc---CCCCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCC
Confidence 11111 00010 1111112455678899999999999999999999998753
No 238
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.2e-37 Score=328.61 Aligned_cols=200 Identities=25% Similarity=0.299 Sum_probs=169.6
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcC-CC-----ceeeeeeeeecCCc
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-HR-----NLLRLCGFCSTENE 372 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~~~~~~~~~ 372 (623)
.++|.+.+.||+|+||.||+|... +++.||||+++... ....++..|+.+++.++ |+ +|+++++++...+.
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 468999999999999999999875 68899999997432 22346778888888775 55 49999999999999
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC--CCCcEEEeecc
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD--EDFEAVVGDFG 450 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~--~~~~~kl~Dfg 450 (623)
.++||||++ |+|.+++.... ...+++..+..++.|++.||.|||++ ..+|+||||||+|||++ .++.+||+|||
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred eEEEEecCC-CCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 999999995 59999997642 24589999999999999999999952 22899999999999995 57889999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcc
Q 006968 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (623)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~ 509 (623)
+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 207 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 207 SSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred Cceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99876432 23456899999999999999999999999999999999999999754
No 239
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=326.22 Aligned_cols=246 Identities=25% Similarity=0.370 Sum_probs=194.0
Q ss_pred HHhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-----chHHHHHHHHHHhhc----CCCceeeeeeee
Q 006968 298 AATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-----GEVQFQTEVETISLA----VHRNLLRLCGFC 367 (623)
Q Consensus 298 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l----~H~niv~l~~~~ 367 (623)
...++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|+.++.++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 34578999999999999999999864 68999999997543221 233467899999888 899999999999
Q ss_pred ecCCceEEEEec-ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC-CCCcEE
Q 006968 368 STENERLLVYPY-MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD-EDFEAV 445 (623)
Q Consensus 368 ~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~k 445 (623)
...+..++|+|| +.+++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++ .++.+|
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEK----GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEE
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEE
Confidence 999999999999 7899999999863 3589999999999999999999999 999999999999999 889999
Q ss_pred EeecccccccCCCCCceeeccccccccccccccccCCC-CCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHH
Q 006968 446 VGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKK 524 (623)
Q Consensus 446 l~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 524 (623)
|+|||++....... .....||..|+|||++.+..+ +.++||||||+++|||++|+.||.....
T Consensus 181 l~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------------- 244 (312)
T 2iwi_A 181 LIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------------- 244 (312)
T ss_dssp ECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------------
T ss_pred EEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-------------
Confidence 99999998765432 234558999999999877666 4589999999999999999999863211
Q ss_pred HhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 006968 525 LHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLE 577 (623)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 577 (623)
... ... .++.....++.+++.+||+.||++|||+.|++++-.
T Consensus 245 ~~~-~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 245 ILE-AEL----------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp HHH-TCC----------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred Hhh-hcc----------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 000 000 111223467899999999999999999999998643
No 240
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=8.1e-39 Score=329.34 Aligned_cols=244 Identities=23% Similarity=0.369 Sum_probs=201.1
Q ss_pred HhcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc-----chHHHHHHHHHHhhcC--CCceeeeeeeeecC
Q 006968 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-----GEVQFQTEVETISLAV--HRNLLRLCGFCSTE 370 (623)
Q Consensus 299 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~ 370 (623)
..++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|+.++++++ ||||+++++++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 3467999999999999999999864 68999999997654322 2245788999999996 59999999999999
Q ss_pred CceEEEEecccC-CChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEEC-CCCcEEEee
Q 006968 371 NERLLVYPYMPN-GSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD-EDFEAVVGD 448 (623)
Q Consensus 371 ~~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~kl~D 448 (623)
+..++|+||+.+ ++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++ +++.+||+|
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~D 193 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITER----GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLID 193 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred CcEEEEEEcCCCCccHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEee
Confidence 999999999976 8999998763 4689999999999999999999999 999999999999999 789999999
Q ss_pred cccccccCCCCCceeeccccccccccccccccCCC-CCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhh
Q 006968 449 FGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQ 527 (623)
Q Consensus 449 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 527 (623)
||+++..... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||..... ...
T Consensus 194 fg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------------~~~ 257 (320)
T 3a99_A 194 FGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------------IIR 257 (320)
T ss_dssp CTTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------------HHH
T ss_pred Cccccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------------hhc
Confidence 9999876532 2234569999999999977665 6889999999999999999999963211 000
Q ss_pred cCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 528 EGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
+.. ..... .+.++.+++.+||..||++|||+.|++++-
T Consensus 258 -~~~------~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~hp 295 (320)
T 3a99_A 258 -GQV------FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHP 295 (320)
T ss_dssp -CCC------CCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred -ccc------ccccc----CCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 100 01111 236789999999999999999999998854
No 241
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=319.92 Aligned_cols=252 Identities=23% Similarity=0.317 Sum_probs=180.3
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHH-HHHHHHHHhhcCCCceeeeeeeeecCCceEEEEe
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~-~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 378 (623)
++|...+.||+|+||.||+|... +|+.||||+++.........+ +.++..+++.++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 56888899999999999999985 689999999976543333333 4444556788899999999999999999999999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE-QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
|+ ++.+..+.... ...+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++.....
T Consensus 105 ~~-~~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 105 LM-GTCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp CC-SEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred cc-CCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 99 44554444332 3468999999999999999999998 5 899999999999999999999999999976543
Q ss_pred CCCceeeccccccccccccccc-----cCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLS 532 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (623)
.. ......||+.|+|||.+. ...++.++||||||+++|||++|+.||..... ..+.......... .
T Consensus 178 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~-~ 248 (318)
T 2dyl_A 178 DK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT------DFEVLTKVLQEEP-P 248 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHHHHHHSCC-C
T ss_pred Cc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc------cHHHHHHHhccCC-C
Confidence 22 223345899999999984 45688999999999999999999999964221 1112222222111 0
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 533 QMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
. +.. ....+.++.+++.+||..||.+|||+.+++++
T Consensus 249 ~-----~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 249 L-----LPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp C-----CCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred C-----CCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0 000 01123678999999999999999999999874
No 242
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=6e-38 Score=325.04 Aligned_cols=254 Identities=20% Similarity=0.248 Sum_probs=174.0
Q ss_pred hcCCCcC-CceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeec----CCce
Q 006968 300 TSNFSAK-NILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCST----ENER 373 (623)
Q Consensus 300 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~ 373 (623)
.++|.+. ++||+|+||.||+|... +|+.||||++.... ....+....+..+.||||+++++++.. ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 4678874 46999999999999976 68999999986432 122223334567789999999999865 4458
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC---CCcEEEeecc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE---DFEAVVGDFG 450 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~Dfg 450 (623)
++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 99999999999999998642 34699999999999999999999999 9999999999999986 4559999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCc
Q 006968 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530 (623)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (623)
+++..... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||............. ... ..+.
T Consensus 177 ~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~-~~~~ 249 (336)
T 3fhr_A 177 FAKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK---RRI-RLGQ 249 (336)
T ss_dssp TCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------
T ss_pred cceecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHH---Hhh-hccc
Confidence 99865432 2234458999999999988889999999999999999999999996432211100000 000 0000
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 531 LSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
...........+.++.+++.+||+.||++|||+.|++++-
T Consensus 250 ------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 250 ------YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp -------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred ------cccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 0001001112346789999999999999999999999853
No 243
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.9e-37 Score=321.96 Aligned_cols=259 Identities=19% Similarity=0.262 Sum_probs=199.6
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CC-cEEEEEEecccccccchHHHHHHHHHHhhcCCCc------eeeeeeeeecCCc
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DG-ALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN------LLRLCGFCSTENE 372 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~~~ 372 (623)
++|.+.+.||+|+||.||+|... ++ ..||||+++... .....+.+|+.+++.++|++ ++.+++++...+.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG--KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc--cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 67899999999999999999874 34 789999997432 23456888999999887766 8999999999999
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEE--------------
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL-------------- 438 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll-------------- 438 (623)
.++||||+ ++++.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred EEEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccc
Confidence 99999999 67777777653 234699999999999999999999999 99999999999999
Q ss_pred -----CCCCcEEEeecccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccc
Q 006968 439 -----DEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAAN 513 (623)
Q Consensus 439 -----~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~ 513 (623)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 56789999999999864432 234569999999999999999999999999999999999999997433211
Q ss_pred cccchHHHHHHHhhc--------C-ccccccccc---------------------cCCCCCHHHHHHHHHHHHHccCCCC
Q 006968 514 QRGVMLDWVKKLHQE--------G-KLSQMVDKD---------------------LKGNFDRIELEEMVQVALLCTQFNP 563 (623)
Q Consensus 514 ~~~~~~~~~~~~~~~--------~-~~~~~~~~~---------------------~~~~~~~~~~~~l~~l~~~cl~~~P 563 (623)
. ...+...... . ......... ...........++.+++.+||+.||
T Consensus 247 ~----~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 322 (355)
T 2eu9_A 247 H----LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP 322 (355)
T ss_dssp H----HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred H----HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCCh
Confidence 1 1111111000 0 000000000 0001123345689999999999999
Q ss_pred CCCCCHHHHHHH
Q 006968 564 LHRPKMSEVLKM 575 (623)
Q Consensus 564 ~~RPs~~evl~~ 575 (623)
++|||+.|++++
T Consensus 323 ~~Rpt~~e~l~h 334 (355)
T 2eu9_A 323 AQRITLAEALLH 334 (355)
T ss_dssp TTSCCHHHHTTS
T ss_pred hhCcCHHHHhcC
Confidence 999999999875
No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.6e-38 Score=350.90 Aligned_cols=261 Identities=23% Similarity=0.323 Sum_probs=200.5
Q ss_pred hcCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeec------CCc
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCST------ENE 372 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~ 372 (623)
..+|.+.+.||+|+||.||+|... +|+.||||+++..........+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 367999999999999999999874 6899999999765444455679999999999999999999998765 667
Q ss_pred eEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCc---EEEeec
Q 006968 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE---AVVGDF 449 (623)
Q Consensus 373 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~Df 449 (623)
.++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 899999999999999998643 234689999999999999999999999 9999999999999997665 999999
Q ss_pred ccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcC
Q 006968 450 GLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEG 529 (623)
Q Consensus 450 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 529 (623)
|++....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ..|........
T Consensus 169 G~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~------~~~~~~i~~~~ 240 (676)
T 3qa8_A 169 GYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP------VQWHGKVREKS 240 (676)
T ss_dssp CCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH------HHSSTTCC---
T ss_pred cccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch------hhhhhhhhccc
Confidence 9998765433 233456999999999999999999999999999999999999999643211 11111000000
Q ss_pred cc----cccccc--------ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 006968 530 KL----SQMVDK--------DLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEV 572 (623)
Q Consensus 530 ~~----~~~~~~--------~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev 572 (623)
.. ...... .....+....+..+.+++.+||..||++|||+.|+
T Consensus 241 ~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 241 NEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp ---CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred chhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 00 000000 11122345567889999999999999999999774
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=333.81 Aligned_cols=250 Identities=25% Similarity=0.304 Sum_probs=187.1
Q ss_pred cCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCceEEEEec
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~ 379 (623)
.+|...+.||+|+||+||.....+|+.||||++..... ..+.+|+++++.+ +||||+++++++...+..++||||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 46888899999999996655556899999999965332 2457899999998 799999999999999999999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC-----CCcEEEeecccccc
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE-----DFEAVVGDFGLAKL 454 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~-----~~~~kl~Dfgla~~ 454 (623)
+. |+|.+++.... ....+..+..++.|++.||+|||+. +|+||||||+|||++. ...+||+|||+++.
T Consensus 100 ~~-g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 100 CA-ATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp CS-EEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred CC-CCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 96 69999987642 2344455678999999999999999 9999999999999953 34688999999987
Q ss_pred cCCCCC--ceeeccccccccccccccc---cCCCCCccchhhHHHHHHHHHh-CCCCCCcccccccccchHHHHHHHhhc
Q 006968 455 LDHRDS--HVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELIT-GQRALDFGRAANQRGVMLDWVKKLHQE 528 (623)
Q Consensus 455 ~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~SlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 528 (623)
...... .......||+.|+|||++. ...++.++|||||||++|||++ |+.||..... .........
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~--------~~~~~~~~~ 244 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ--------RQANILLGA 244 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT--------HHHHHHTTC
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH--------HHHHHHhcc
Confidence 654322 2234456999999999997 4567889999999999999999 8888853211 001111111
Q ss_pred CccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 006968 529 GKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKML 576 (623)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L 576 (623)
... .. . .........+.+++.+||+.||++|||+.|++++-
T Consensus 245 ~~~-~~----~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp 285 (432)
T 3p23_A 245 CSL-DC----L--HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP 285 (432)
T ss_dssp CCC-TT----S--CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTST
T ss_pred CCc-cc----c--CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCc
Confidence 110 00 0 01223456688999999999999999999999653
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.6e-36 Score=306.90 Aligned_cols=228 Identities=13% Similarity=0.045 Sum_probs=181.7
Q ss_pred cCCCcCCceeccCCeEEEEEEeC-CCcEEEEEEeccccccc--chHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEEE
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG--GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.+|.+.+.||+|+||.||+|... +|+.||||+++...... ....|.+|+..+.+++||||+++++++...+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56888999999999999999985 48999999997654322 2357899999999999999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||+++++|.+++... .....+.+++.|++.||+|||++ +|+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 999999999998542 35567889999999999999999 99999999999999999999998443
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccccccc
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDK 537 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (623)
|++ .++.++||||||+++|||+||+.||........... .......
T Consensus 175 --------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~-------------~~~~~~~ 220 (286)
T 3uqc_A 175 --------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP-------------AERDTAG 220 (286)
T ss_dssp --------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE-------------CCBCTTS
T ss_pred --------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH-------------HHHHhcc
Confidence 333 367899999999999999999999975332111000 0000000
Q ss_pred ccC--CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 006968 538 DLK--GNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGD 579 (623)
Q Consensus 538 ~~~--~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~~ 579 (623)
... .......+.++.+++.+||+.||++| |+.|+++.|+..
T Consensus 221 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~ 263 (286)
T 3uqc_A 221 QPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQA 263 (286)
T ss_dssp CBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHH
T ss_pred CCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHH
Confidence 000 00011234678999999999999999 999999999874
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.7e-37 Score=347.20 Aligned_cols=238 Identities=21% Similarity=0.285 Sum_probs=191.7
Q ss_pred cCCCcCCceeccCCeEEEEEEeC--CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCceeeeeeeeecCCc-----e
Q 006968 301 SNFSAKNILGRGGFGIVYKGCFS--DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENE-----R 373 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~-----~ 373 (623)
++|.+.+.||+|+||.||+|.+. +|+.||||++...........+.+|+.++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67899999999999999999975 5899999998754433445578999999999999999999999987655 6
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
++||||+++++|.+++.. .+++..++.++.|++.||.|||++ +|+||||||+|||++.+ .+||+|||+++
T Consensus 160 ~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccch
Confidence 999999999999877643 589999999999999999999999 99999999999999986 99999999998
Q ss_pred ccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCcccc
Q 006968 454 LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQ 533 (623)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (623)
..... ....||+.|+|||++.+.. +.++|||||||++|+|++|..|+...... ...
T Consensus 230 ~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~-----------------~~~- 285 (681)
T 2pzi_A 230 RINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD-----------------GLP- 285 (681)
T ss_dssp ETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS-----------------SCC-
T ss_pred hcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc-----------------ccc-
Confidence 76543 3346999999999987654 88999999999999999998887531110 000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHhhc
Q 006968 534 MVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPK-MSEVLKMLEG 578 (623)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-~~evl~~L~~ 578 (623)
...........+.+++.+||+.||++||+ +.++.+.|..
T Consensus 286 ------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 286 ------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp ------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 00001122367889999999999999995 5555555543
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=6.2e-37 Score=326.34 Aligned_cols=244 Identities=14% Similarity=0.078 Sum_probs=182.3
Q ss_pred cCCCcCCceeccCCeEEEEEEe-CCCcEEEEEEeccccccc--chHHHHHHHHHHhhcCC-Cceeeeee-----------
Q 006968 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAG--GEVQFQTEVETISLAVH-RNLLRLCG----------- 365 (623)
Q Consensus 301 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~H-~niv~l~~----------- 365 (623)
.+|...+.||+|+||.||+|.+ .+|+.||||+++...... ....|.+|+.+++.++| +|......
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4566778999999999999995 469999999987433222 24578999999999987 32211111
Q ss_pred ----------eeec-----CCceEEEEecccCCChhhhhhhc---cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 006968 366 ----------FCST-----ENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427 (623)
Q Consensus 366 ----------~~~~-----~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~iv 427 (623)
++.. ....+++|+++ +++|.+++... ......+++..+..++.|+++||+|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 1111 12356777765 68999888532 22344688999999999999999999999 999
Q ss_pred ecCCCCCCeEECCCCcEEEeecccccccCCCCCceeecccccccccccccc----------ccCCCCCccchhhHHHHHH
Q 006968 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL----------STGQSSEKTDVFGFGILLL 497 (623)
Q Consensus 428 H~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~SlGvil~ 497 (623)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999864422 344567 999999999 5566889999999999999
Q ss_pred HHHhCCCCCCcccccccccchHHHHHHHhhcCccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 498 ELITGQRALDFGRAANQRGVMLDWVKKLHQEGKLSQMVDKDLKGNFDRIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 498 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
||++|+.||........ ...++... ..+ +.++.+++.+||..||++|||+.+++++
T Consensus 309 elltg~~Pf~~~~~~~~----------------~~~~~~~~--~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGG----------------SEWIFRSC--KNI----PQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHSSCCCCTTGGGSC----------------SGGGGSSC--CCC----CHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHCCCCCCCcchhhh----------------HHHHHhhc--ccC----CHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 99999999964322111 11111100 112 3679999999999999999999888653
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.3e-35 Score=302.45 Aligned_cols=227 Identities=21% Similarity=0.283 Sum_probs=178.9
Q ss_pred cCCCcC-CceeccCCeEEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHH-hhcCCCceeeeeeeeec----CCce
Q 006968 301 SNFSAK-NILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETI-SLAVHRNLLRLCGFCST----ENER 373 (623)
Q Consensus 301 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~~~~~~----~~~~ 373 (623)
.+|.+. +.||+|+||.||+|... +++.||||+++. ...+.+|++++ +..+||||+++++++.. ....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 456666 78999999999999874 689999999864 23577888888 56689999999999876 6678
Q ss_pred EEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECC---CCcEEEeecc
Q 006968 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE---DFEAVVGDFG 450 (623)
Q Consensus 374 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~Dfg 450 (623)
++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 99999999999999998742 34699999999999999999999999 9999999999999998 7889999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCCcccccccccchHHHHHHHhhcCc
Q 006968 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVKKLHQEGK 530 (623)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (623)
++.... +..++.++||||||+++|||++|+.||......... ...
T Consensus 166 ~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~------------~~~ 210 (299)
T 3m2w_A 166 FAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------------PGM 210 (299)
T ss_dssp TCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------------CCS
T ss_pred cccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh------------HHH
Confidence 986532 234677999999999999999999999643221100 000
Q ss_pred cccccccccCCCCC----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006968 531 LSQMVDKDLKGNFD----RIELEEMVQVALLCTQFNPLHRPKMSEVLKM 575 (623)
Q Consensus 531 ~~~~~~~~~~~~~~----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 575 (623)
........ ...+ ...+.++.+++.+||+.||++|||+.|++++
T Consensus 211 ~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 211 KTRIRMGQ--YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CCSSCTTC--CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhhcc--ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00000000 0111 1134679999999999999999999999985
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1e-36 Score=315.91 Aligned_cols=241 Identities=14% Similarity=0.146 Sum_probs=184.1
Q ss_pred hcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEeccccc-------ccchHHHHHHHHHHhhcC---------CCceeee
Q 006968 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNI-------AGGEVQFQTEVETISLAV---------HRNLLRL 363 (623)
Q Consensus 300 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~---------H~niv~l 363 (623)
.++|.+.+.||+|+||.||+|.. +|+.||||+++.... ......+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688899999999999999998 789999999976532 222357889999988886 5555555
Q ss_pred e-----------------eeeec-------------CCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHH
Q 006968 364 C-----------------GFCST-------------ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413 (623)
Q Consensus 364 ~-----------------~~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~ 413 (623)
. +++.. .+..++||||+++|++.+.+.. ..+++..++.++.|++.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHH
Confidence 4 44443 6789999999999987766643 35899999999999999
Q ss_pred HHHHHH-hCCCCCeEecCCCCCCeEECCCC--------------------cEEEeecccccccCCCCCceeecccccccc
Q 006968 414 GLLYLH-EQCDPKIIHRDVKAANILLDEDF--------------------EAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472 (623)
Q Consensus 414 ~L~~LH-~~~~~~ivH~Dlk~~NIll~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y 472 (623)
||+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y 243 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVS 243 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCT
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecc
Confidence 999999 88 999999999999999887 8999999999876532 23699999
Q ss_pred ccccccccCCCCCccchhhHHHH-HHHHHhCCCCCCcccccccccchHHHHHHH----hhcCccccccccccCCCCCHHH
Q 006968 473 IAPEYLSTGQSSEKTDVFGFGIL-LLELITGQRALDFGRAANQRGVMLDWVKKL----HQEGKLSQMVDKDLKGNFDRIE 547 (623)
Q Consensus 473 ~aPE~~~~~~~~~~~Dv~SlGvi-l~elltg~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 547 (623)
+|||++.+.. +.++||||++++ .+++++|..||.. ..|.... ....... ...........
T Consensus 244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~----------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 308 (336)
T 2vuw_A 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN----------VLWLHYLTDKMLKQMTFK----TKCNTPAMKQI 308 (336)
T ss_dssp TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH----------HHHHHHHHHHHHHTCCCS----SCCCSHHHHHH
T ss_pred cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc----------hhhhhHHHHhhhhhhccC----cccchhhhhhc
Confidence 9999998766 899999998776 7888889998741 1121111 1110100 01111123456
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHH-HH
Q 006968 548 LEEMVQVALLCTQFNPLHRPKMSEVL-KM 575 (623)
Q Consensus 548 ~~~l~~l~~~cl~~~P~~RPs~~evl-~~ 575 (623)
+.++.+++.+||+.| |+.|++ ++
T Consensus 309 s~~~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 309 KRKIQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred CHHHHHHHHHHhccC-----CHHHHHhcC
Confidence 788999999999866 999998 64
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=2.5e-29 Score=277.08 Aligned_cols=186 Identities=15% Similarity=0.056 Sum_probs=130.0
Q ss_pred eeccCCeEEEEEE-eCCCcEEEEEEeccccc---------ccchHHHHHHHHHHhhc-CCCceeeeeeeeecCCceEEEE
Q 006968 309 LGRGGFGIVYKGC-FSDGALVAVKRLKDYNI---------AGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 309 lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---------~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 377 (623)
.+.|++|.+..+. .-.|+.+|||++.+... ....++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4555555555433 22488899999975421 12234699999999999 6999999999999999999999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCC
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~ 457 (623)
||++|++|.++|... .+++.. +|+.||+.||+|+|++ |||||||||+|||+++++.+||+|||+|+....
T Consensus 322 Eyv~G~~L~d~i~~~----~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG----EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHHTT----CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHHhC----CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 999999999999763 356654 5889999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCC
Q 006968 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRAL 506 (623)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~ 506 (623)
... .....+||++|+|||++.+ .+..++|+||+|++++++.++..++
T Consensus 392 ~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 392 DCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp --C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 322 2344679999999999865 5677899999999988876665443
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.93 E-value=2.4e-26 Score=235.31 Aligned_cols=172 Identities=28% Similarity=0.515 Sum_probs=158.1
Q ss_pred CCCchHHHHHHHHHHhCCCCCcccCCCCCCCCCCCC--cceeeeCCC---CcEEEEeCCCCCccc--ccCccccCCCCcc
Q 006968 29 AGINYEVVALVAVKNNLHDPYNVLENWDITSVDPCS--WRMITCSPD---GYVSALGLPSQSLSG--TLSPWIGNLTKLQ 101 (623)
Q Consensus 29 ~~~~~~~~~l~~~k~~~~~p~~~~~~w~~~~~~~c~--w~gv~c~~~---~~v~~L~L~~n~l~~--~~~~~~~~l~~L~ 101 (623)
.|...|+.||++||+++.||. .+.+|+. +.+||. |.||+|+.. ++|+.|+|++|+++| .+|..|.++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 477889999999999999887 7899974 578998 999999864 799999999999999 9999999999999
Q ss_pred eEEeec-CCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCC
Q 006968 102 SVLLQN-NAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYN 180 (623)
Q Consensus 102 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 180 (623)
+|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++|+|++|.+++.+|..+..+++|+.|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999994 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCcCCCCcc------ccccccCCCCC
Q 006968 181 NLSGSLPKISA------RTFKVTGNPLI 202 (623)
Q Consensus 181 ~l~~~~p~~~~------~~~~~~~n~~~ 202 (623)
+++|.+|..+. +.+++++|.+.
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~ 187 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLT 187 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeee
Confidence 99998887543 45677787763
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=8.6e-27 Score=255.40 Aligned_cols=185 Identities=16% Similarity=0.201 Sum_probs=146.7
Q ss_pred CcCCceeccCCeEEEEEEeCCCcEEEEEEeccccccc-------chHHHHHHHHHHhhcCCCceeeeeeeeecCCceEEE
Q 006968 304 SAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAG-------GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (623)
Q Consensus 304 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv 376 (623)
...+.||+|+||.||+|.. .+..+|+|+........ ..+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999955 67889999875432211 123589999999999999999777777778888999
Q ss_pred EecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccC
Q 006968 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (623)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~ 456 (623)
|||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++...
T Consensus 418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 999999999999875 468999999999999999 9999999999999999 99999999999875
Q ss_pred CCCCce------eecccccccccccccccc--CCCCCccchhhHHHHHHHHHhCCCCC
Q 006968 457 HRDSHV------TTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELITGQRAL 506 (623)
Q Consensus 457 ~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~SlGvil~elltg~~p~ 506 (623)
...... .....||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.++
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 432211 235679999999999976 56788899999999988888877665
No 254
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=1.2e-23 Score=211.41 Aligned_cols=154 Identities=12% Similarity=0.047 Sum_probs=122.9
Q ss_pred HHHHHHHhcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccc-----------------cchHHHHHHHHHHhhc
Q 006968 293 FKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-----------------GGEVQFQTEVETISLA 355 (623)
Q Consensus 293 ~~~l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~~e~~~l~~l 355 (623)
+..+......|.+.+.||+|+||.||+|...+|+.||||.++..... .....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 34455555667788999999999999999977999999999643211 1234689999999999
Q ss_pred CCCceeeeeeeeecCCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCC
Q 006968 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAAN 435 (623)
Q Consensus 356 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~N 435 (623)
+ | +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||+|||+. +|+||||||+|
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~N 223 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYN 223 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHH
Confidence 8 5 666665543 56799999999999888 421 12357999999999999999 99999999999
Q ss_pred eEECCCCcEEEeecccccccCCCCCceeeccccccccccccccc
Q 006968 436 ILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS 479 (623)
Q Consensus 436 Ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 479 (623)
||++ ++.+||+|||+++. +..|.|||++.
T Consensus 224 ILl~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 224 VLVS-EEGIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp EEEE-TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred EEEE-CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 9999 99999999999973 34578898874
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.88 E-value=2.5e-23 Score=238.75 Aligned_cols=154 Identities=28% Similarity=0.418 Sum_probs=100.9
Q ss_pred CCCCchHHHHHHHHHHhCCCCCcccCCCCCCCCCCCCcceeeeCCCCcEEEEeCCCCCcccc---cCcc-----------
Q 006968 28 PAGINYEVVALVAVKNNLHDPYNVLENWDITSVDPCSWRMITCSPDGYVSALGLPSQSLSGT---LSPW----------- 93 (623)
Q Consensus 28 ~~~~~~~~~~l~~~k~~~~~p~~~~~~w~~~~~~~c~w~gv~c~~~~~v~~L~L~~n~l~~~---~~~~----------- 93 (623)
..+.+.|+.||++||+++.||. .+++|+ .+.+||+|.||+|+ .++|+.|+|++++++|. +|+.
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~-~l~~W~-~~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~ 83 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKN-LLPDWS-SNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLF 83 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTT-SSTTCC-TTSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEE
T ss_pred ccCCHHHHHHHHHHHhhCCCcc-cccCCC-CCCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCcccccC
Confidence 3446779999999999999998 999997 56799999999998 78999999999999987 6654
Q ss_pred ------------ccCCCCcceEEeecCCCCCCCCC--ccCCCCCccEEEecCCCCCCCCCccc-cCCCCccchhcccccc
Q 006968 94 ------------IGNLTKLQSVLLQNNAILGPIPA--SLGKLEKLQTLDLSNNKFTGEIPDSL-GDLGNLNYLRLNNNSL 158 (623)
Q Consensus 94 ------------~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l 158 (623)
|+++++|++|+|++|.++|.+|. .++++++|++|||++|.+++.+|..+ .++++|++|+|++|++
T Consensus 84 ~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 163 (768)
T 3rgz_A 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSI 163 (768)
T ss_dssp CTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCC
T ss_pred CcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCcc
Confidence 44555555555555555555554 55555555555555555555555443 4455555555555555
Q ss_pred CCCCCcc---cCCCCcccEEECCCCcCcC
Q 006968 159 TGSCPES---LSKIESLTLVDLSYNNLSG 184 (623)
Q Consensus 159 ~~~~p~~---~~~l~~L~~L~l~~N~l~~ 184 (623)
++..|.. +.++++|+.|++++|.+++
T Consensus 164 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 192 (768)
T 3rgz_A 164 SGANVVGWVLSDGCGELKHLAISGNKISG 192 (768)
T ss_dssp EEETHHHHHHTTCCTTCCEEECCSSEEES
T ss_pred CCcCChhhhhhccCCCCCEEECCCCcccc
Confidence 4444433 3444444444444444443
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=3.3e-23 Score=237.40 Aligned_cols=174 Identities=24% Similarity=0.306 Sum_probs=152.3
Q ss_pred CCCCchHHHHHHHHHHhCCCCCcccCCCCCCC----CCC--CCc------------ceeeeCCCCcEEEEeCCCCCcccc
Q 006968 28 PAGINYEVVALVAVKNNLHDPYNVLENWDITS----VDP--CSW------------RMITCSPDGYVSALGLPSQSLSGT 89 (623)
Q Consensus 28 ~~~~~~~~~~l~~~k~~~~~p~~~~~~w~~~~----~~~--c~w------------~gv~c~~~~~v~~L~L~~n~l~~~ 89 (623)
.+....|+.||++||+++.+| +|+.++ .+| |+| .||+|+..++|+.|+|++|+|+|.
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGR 338 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEE
T ss_pred cccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCc
Confidence 344556899999999999887 797654 466 999 999999888999999999999999
Q ss_pred cCccccCCCCcceEEe-ecCCCCCC-------------------------------------------------------
Q 006968 90 LSPWIGNLTKLQSVLL-QNNAILGP------------------------------------------------------- 113 (623)
Q Consensus 90 ~~~~~~~l~~L~~L~L-~~N~l~~~------------------------------------------------------- 113 (623)
+|+.|++|++|++|+| ++|.++|.
T Consensus 339 ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 339 VPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp ECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred CchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 9999999999999999 77765544
Q ss_pred ---------------------CCCccCCCCCccEEEecCCCCCC-----------------CCCcccc--CCCCccchhc
Q 006968 114 ---------------------IPASLGKLEKLQTLDLSNNKFTG-----------------EIPDSLG--DLGNLNYLRL 153 (623)
Q Consensus 114 ---------------------~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L~~L~l 153 (623)
+|..|+++++|++|+|++|+|+| .+|..++ ++++|++|+|
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~L 498 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVEL 498 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred cccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEEC
Confidence 88899999999999999999998 3999988 9999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCc-CcC-cCCCCc------------cccccccCCCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNN-LSG-SLPKIS------------ARTFKVTGNPLICGPK 206 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~~------------~~~~~~~~n~~~~~~~ 206 (623)
++|++.+.+|..|.++++|+.|+|++|+ |+| .+|..+ .+.+++++|.+...|.
T Consensus 499 s~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~ 565 (876)
T 4ecn_A 499 YNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPA 565 (876)
T ss_dssp ESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCC
T ss_pred cCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCC
Confidence 9999999999999999999999999998 998 777532 2567888888764443
No 257
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.87 E-value=1.7e-22 Score=226.70 Aligned_cols=174 Identities=22% Similarity=0.329 Sum_probs=151.7
Q ss_pred CCchHHHHHHHHHHhCCCCC--------cccCCCCCCCCCCCCc---ceeeeCCCCcEEEEeCCCCCcccccCccccCCC
Q 006968 30 GINYEVVALVAVKNNLHDPY--------NVLENWDITSVDPCSW---RMITCSPDGYVSALGLPSQSLSGTLSPWIGNLT 98 (623)
Q Consensus 30 ~~~~~~~~l~~~k~~~~~p~--------~~~~~w~~~~~~~c~w---~gv~c~~~~~v~~L~L~~n~l~~~~~~~~~~l~ 98 (623)
....|+.||.+++.++.++. ....+|+. +.+||.| .||+|+..++|+.|+|++|+|+|.+|+.|++|+
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~ 105 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCT
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCc
Confidence 33458899999999986542 23458985 5899999 999999889999999999999999999999999
Q ss_pred CcceEEeecCC---------------------------------------------------------------------
Q 006968 99 KLQSVLLQNNA--------------------------------------------------------------------- 109 (623)
Q Consensus 99 ~L~~L~L~~N~--------------------------------------------------------------------- 109 (623)
+|++|+|++|.
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 99999999884
Q ss_pred ---------CCCCCCCccCCCCCccEEEecCCCCCCC-----------------CCcccc--CCCCccchhccccccCCC
Q 006968 110 ---------ILGPIPASLGKLEKLQTLDLSNNKFTGE-----------------IPDSLG--DLGNLNYLRLNNNSLTGS 161 (623)
Q Consensus 110 ---------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~ 161 (623)
++| +|..|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|++.|.
T Consensus 186 l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~ 264 (636)
T 4eco_A 186 TQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTK 264 (636)
T ss_dssp TTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSS
T ss_pred hhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCcc
Confidence 445 889999999999999999999986 999999 999999999999999999
Q ss_pred CCcccCCCCcccEEECCCCc-CcC-cCCCCc-----------cccccccCCCCCCCC
Q 006968 162 CPESLSKIESLTLVDLSYNN-LSG-SLPKIS-----------ARTFKVTGNPLICGP 205 (623)
Q Consensus 162 ~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~~-----------~~~~~~~~n~~~~~~ 205 (623)
+|..|.++++|+.|+|++|+ ++| .+|... .+.+++++|.+...+
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip 321 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFP 321 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCC
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccC
Confidence 99999999999999999998 998 777632 256788999886444
No 258
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=1.1e-20 Score=184.10 Aligned_cols=148 Identities=22% Similarity=0.260 Sum_probs=131.9
Q ss_pred CCCCCCCcceeeeCCC----------CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEE
Q 006968 58 TSVDPCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTL 127 (623)
Q Consensus 58 ~~~~~c~w~gv~c~~~----------~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 127 (623)
.+.+.|+|.+|.|+.. ..++.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|
T Consensus 14 ~~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L 93 (229)
T 3e6j_A 14 PSQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVL 93 (229)
T ss_dssp CTTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEE
Confidence 3568899999999852 379999999999999889999999999999999999986666778999999999
Q ss_pred EecCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCC
Q 006968 128 DLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLI 202 (623)
Q Consensus 128 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~ 202 (623)
+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+. +.+.+.+|++.
T Consensus 94 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 94 DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred ECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 99999999766677899999999999999999 8899999999999999999999977665443 56889999999
Q ss_pred CCCC
Q 006968 203 CGPK 206 (623)
Q Consensus 203 ~~~~ 206 (623)
|.+.
T Consensus 173 c~c~ 176 (229)
T 3e6j_A 173 CECR 176 (229)
T ss_dssp TTBG
T ss_pred CCcc
Confidence 8764
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.83 E-value=1.7e-21 Score=200.48 Aligned_cols=178 Identities=19% Similarity=0.253 Sum_probs=152.9
Q ss_pred hccCCCCCchHHHHHHHHHHhC-CCCCcccCCCC---CCCCCCCCcceeeeCC---------CCcEEEEeCCCCCccccc
Q 006968 24 ATLSPAGINYEVVALVAVKNNL-HDPYNVLENWD---ITSVDPCSWRMITCSP---------DGYVSALGLPSQSLSGTL 90 (623)
Q Consensus 24 ~~~~~~~~~~~~~~l~~~k~~~-~~p~~~~~~w~---~~~~~~c~w~gv~c~~---------~~~v~~L~L~~n~l~~~~ 90 (623)
......+...++.||++||..+ .||.+.+.+|. ..+.++|.|.|++|.. ..+|+.|+|++|+|+ .+
T Consensus 18 ~~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~l 96 (328)
T 4fcg_A 18 YFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QF 96 (328)
T ss_dssp CCC--CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SC
T ss_pred eeeccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hc
Confidence 3345667788999999999998 57877788894 3467899999999952 368999999999999 88
Q ss_pred CccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhccccccCCCCCcccCC--
Q 006968 91 SPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSK-- 168 (623)
Q Consensus 91 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-- 168 (623)
|+.++++++|++|+|++|+++ .+|..++++++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..+..
T Consensus 97 p~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~ 174 (328)
T 4fcg_A 97 PDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTD 174 (328)
T ss_dssp CSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC
T ss_pred ChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhcc
Confidence 999999999999999999999 89999999999999999999999 89999999999999999999998899988765
Q ss_pred -------CCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCCC
Q 006968 169 -------IESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGP 205 (623)
Q Consensus 169 -------l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~ 205 (623)
+++|+.|+|++|+|+ .+|..+. +.+++++|.+...+
T Consensus 175 ~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~ 222 (328)
T 4fcg_A 175 ASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALG 222 (328)
T ss_dssp -CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCC
T ss_pred chhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCc
Confidence 999999999999999 6776443 56788888876433
No 260
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=5.7e-20 Score=177.74 Aligned_cols=146 Identities=23% Similarity=0.314 Sum_probs=130.1
Q ss_pred CCCCcceeeeCCC----------CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEec
Q 006968 61 DPCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLS 130 (623)
Q Consensus 61 ~~c~w~gv~c~~~----------~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 130 (623)
..|.|..|.|+.. ..++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 9 C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls 88 (220)
T 2v9t_B 9 CTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 88 (220)
T ss_dssp SEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECC
T ss_pred CEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECC
Confidence 3478999999742 369999999999998777899999999999999999998889999999999999999
Q ss_pred CCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCCC
Q 006968 131 NNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGP 205 (623)
Q Consensus 131 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~ 205 (623)
+|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+. +.+++++|++.|.+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 89 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 9999955455578999999999999999988899999999999999999999988776544 56889999999976
Q ss_pred C
Q 006968 206 K 206 (623)
Q Consensus 206 ~ 206 (623)
.
T Consensus 169 ~ 169 (220)
T 2v9t_B 169 H 169 (220)
T ss_dssp G
T ss_pred c
Confidence 4
No 261
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=1.4e-19 Score=175.00 Aligned_cols=146 Identities=20% Similarity=0.285 Sum_probs=130.3
Q ss_pred CCCCcceeeeCCC----------CcEEEEeCCCCCcccccC-ccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEe
Q 006968 61 DPCSWRMITCSPD----------GYVSALGLPSQSLSGTLS-PWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDL 129 (623)
Q Consensus 61 ~~c~w~gv~c~~~----------~~v~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 129 (623)
.-|.|..+.|+.. ..++.|+|++|+|++..+ ..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 9 C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 88 (220)
T 2v70_A 9 CRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 88 (220)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEEC
Confidence 3478889999742 258899999999998755 45899999999999999999888889999999999999
Q ss_pred cCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCC
Q 006968 130 SNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICG 204 (623)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~ 204 (623)
++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+. +.+++++|++.|.
T Consensus 89 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 89 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 99999977777899999999999999999988899999999999999999999998887654 5688999999997
Q ss_pred CC
Q 006968 205 PK 206 (623)
Q Consensus 205 ~~ 206 (623)
+.
T Consensus 169 c~ 170 (220)
T 2v70_A 169 CY 170 (220)
T ss_dssp GG
T ss_pred Cc
Confidence 65
No 262
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.79 E-value=4.3e-19 Score=169.96 Aligned_cols=146 Identities=23% Similarity=0.269 Sum_probs=127.4
Q ss_pred CCCCcceeeeCCC----------CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEec
Q 006968 61 DPCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLS 130 (623)
Q Consensus 61 ~~c~w~gv~c~~~----------~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 130 (623)
..|.|.+|.|+.. .+++.|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 5 C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 5 CSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECC
Confidence 4478999999753 369999999999997777788999999999999999997767778999999999999
Q ss_pred CCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCCC
Q 006968 131 NNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGP 205 (623)
Q Consensus 131 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~ 205 (623)
+|+|++..+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|++++..+..+. +.+++++|++.|.+
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 85 TNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred CCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC
Confidence 9999966666789999999999999999977777789999999999999999987765443 56889999998876
Q ss_pred C
Q 006968 206 K 206 (623)
Q Consensus 206 ~ 206 (623)
+
T Consensus 165 ~ 165 (208)
T 2o6s_A 165 P 165 (208)
T ss_dssp T
T ss_pred C
Confidence 4
No 263
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=3e-19 Score=177.05 Aligned_cols=138 Identities=17% Similarity=0.146 Sum_probs=106.2
Q ss_pred CCcCCceeccCCeEEEEEEe-CCCcE--EEEEEeccccccc-----------------------chHHHHHHHHHHhhcC
Q 006968 303 FSAKNILGRGGFGIVYKGCF-SDGAL--VAVKRLKDYNIAG-----------------------GEVQFQTEVETISLAV 356 (623)
Q Consensus 303 ~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~-----------------------~~~~~~~e~~~l~~l~ 356 (623)
|.+.+.||+|+||.||+|.. .+|+. ||||+++...... ....+.+|+..+.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999998 68888 9999975432110 0125789999999998
Q ss_pred CCce--eeeeeeeecCCceEEEEecccC-C----ChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeEe
Q 006968 357 HRNL--LRLCGFCSTENERLLVYPYMPN-G----SVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH-EQCDPKIIH 428 (623)
Q Consensus 357 H~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~~~~ivH 428 (623)
|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +. +|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 8864 233332 367899999943 4 55544322 224466789999999999999 88 9999
Q ss_pred cCCCCCCeEECCCCcEEEeecccccccC
Q 006968 429 RDVKAANILLDEDFEAVVGDFGLAKLLD 456 (623)
Q Consensus 429 ~Dlk~~NIll~~~~~~kl~Dfgla~~~~ 456 (623)
|||||.|||++. .++|+|||+|....
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred CCCCHHHEEEcC--cEEEEECcccccCC
Confidence 999999999998 99999999997643
No 264
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=1.2e-18 Score=164.65 Aligned_cols=146 Identities=23% Similarity=0.308 Sum_probs=118.6
Q ss_pred CCCCcceeeeCCC----------CcEEEEeCCCCCcccccCc-cccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEe
Q 006968 61 DPCSWRMITCSPD----------GYVSALGLPSQSLSGTLSP-WIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDL 129 (623)
Q Consensus 61 ~~c~w~gv~c~~~----------~~v~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 129 (623)
..|.|+.+.|+.. ..++.|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 6 C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 85 (192)
T 1w8a_A 6 CHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQL 85 (192)
T ss_dssp SEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEEC
Confidence 3478888888743 2789999999999876654 4889999999999999999888999999999999999
Q ss_pred cCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCCCCC
Q 006968 130 SNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICGP 205 (623)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~~ 205 (623)
++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+-... +...+.++...|..
T Consensus 86 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 86 GENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGA 165 (192)
T ss_dssp CSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCS
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCC
Confidence 99999987778899999999999999999988899999999999999999999987653211 22234455555554
Q ss_pred C
Q 006968 206 K 206 (623)
Q Consensus 206 ~ 206 (623)
+
T Consensus 166 P 166 (192)
T 1w8a_A 166 P 166 (192)
T ss_dssp S
T ss_pred C
Confidence 3
No 265
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.75 E-value=1.2e-18 Score=200.04 Aligned_cols=135 Identities=35% Similarity=0.583 Sum_probs=125.5
Q ss_pred EEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcccc
Q 006968 77 SALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNN 156 (623)
Q Consensus 77 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 156 (623)
..++++.|.++|.+|..++++++|++|+|++|+++|.+|..|+++++|+.|+|++|+|+|.+|..|+++++|+.|||++|
T Consensus 611 ~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N 690 (768)
T 3rgz_A 611 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 690 (768)
T ss_dssp CCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred cccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCC
Confidence 34567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCCCCCCCCCCCc
Q 006968 157 SLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICGPKATNNCT 212 (623)
Q Consensus 157 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~~~~~~~~~ 212 (623)
+++|.+|..+..+++|+.|+|++|+|+|.+|.... ....+.||+.+||.+.. .|.
T Consensus 691 ~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~ 749 (768)
T 3rgz_A 691 KLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCD 749 (768)
T ss_dssp CCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCC
T ss_pred cccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCC
Confidence 99999999999999999999999999999998643 45678999999998765 675
No 266
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.73 E-value=8.1e-18 Score=166.09 Aligned_cols=130 Identities=23% Similarity=0.227 Sum_probs=111.2
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 68899999999998888889999999999999999998888889999999999999999997667778899999999999
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICG 204 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~ 204 (623)
+|+|++..+..|..+++|+.|+|++|+|++..+..+. +.+++++|.+...
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 9999966666678899999999999999977765443 5678888887543
No 267
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.72 E-value=1.9e-19 Score=195.34 Aligned_cols=123 Identities=21% Similarity=0.180 Sum_probs=75.6
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCcccc-CCCCccchhc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLG-DLGNLNYLRL 153 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l 153 (623)
.++.|+|++|.|++..+. .+++|+.|+|++|.+++..|..|+++++|++|+|++|.|++.+|..+. .+++|+.|+|
T Consensus 100 ~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~L 176 (487)
T 3oja_A 100 SIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (487)
T ss_dssp TCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred CcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEec
Confidence 466666666666654443 345666677777777666666666666777777777777666666654 5666777777
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLI 202 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~ 202 (623)
++|.|++. | .+..+++|+.|+|++|.|++.+|.+.. +.+++++|.+.
T Consensus 177 s~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 177 QYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp TTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC
T ss_pred CCCccccc-c-ccccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCc
Confidence 77766643 2 233466667777777766665554322 44566666654
No 268
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=2.1e-17 Score=153.83 Aligned_cols=127 Identities=27% Similarity=0.308 Sum_probs=106.1
Q ss_pred CCCcceeeeCCC----------CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecC
Q 006968 62 PCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSN 131 (623)
Q Consensus 62 ~c~w~gv~c~~~----------~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 131 (623)
.|+|.+|.|+.. ..++.|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 6 ~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp EEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 478999999752 3688999999999876667788899999999999999876667788899999999999
Q ss_pred CCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCC
Q 006968 132 NKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPK 188 (623)
Q Consensus 132 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 188 (623)
|+|++..+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|++++..|.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 999966666788899999999999999865555578889999999999999887764
No 269
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.71 E-value=5.3e-17 Score=160.25 Aligned_cols=131 Identities=24% Similarity=0.285 Sum_probs=118.8
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 138 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC
Confidence 37999999999999988888999999999999999999887888999999999999999999666667899999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICG 204 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~ 204 (623)
++|+|++..+..|..+++|+.|+|++|+|++.+|..+. +.+++++|++.|.
T Consensus 139 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999976666899999999999999999987775543 5788999999887
No 270
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.70 E-value=8.5e-18 Score=171.67 Aligned_cols=131 Identities=27% Similarity=0.458 Sum_probs=95.3
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.|+|++|++++.+|..+..++ |++|+|++|++++.+|..|.++++|+.|+|++|++++.+|. +..+++|++|+|+
T Consensus 175 ~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 175 LFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp TCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred cCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 455555555555555555555554 66666666666666666677777777777777777755554 6777888888888
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICGPKA 207 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~~~~ 207 (623)
+|++++.+|..+..+++|+.|+|++|+|+|.+|.... +.+++.+|++.|+.+.
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTS
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCC
Confidence 8888888888888888888888888888888887632 5678889998888654
No 271
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=3.5e-17 Score=154.52 Aligned_cols=127 Identities=20% Similarity=0.333 Sum_probs=114.1
Q ss_pred EEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCC-ccCCCCCccEEEecCCCCCCCCCccccCCCCccchhccc
Q 006968 77 SALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPA-SLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNN 155 (623)
Q Consensus 77 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 155 (623)
+.|++++|+|+ .+|..+.. +|++|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 68999999996 78876654 999999999999976664 489999999999999999988899999999999999999
Q ss_pred cccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCCCC
Q 006968 156 NSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGPK 206 (623)
Q Consensus 156 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~~ 206 (623)
|+|++..|..|..+++|+.|+|++|+|++.+|..+. +.+++++|++.|.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999988888899999999999999999998887654 568899999988764
No 272
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.69 E-value=8.8e-17 Score=160.45 Aligned_cols=129 Identities=27% Similarity=0.321 Sum_probs=88.2
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+..+++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 46677777777776555567777777777777777775444556677777777777777775555566777777777777
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLIC 203 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~ 203 (623)
+|++++..|..|..+++|+.|+|++|.|++..+..+. +.+++++|.+..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 171 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR 171 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcE
Confidence 7777766666677777777777777777765554332 456666666543
No 273
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.69 E-value=1e-16 Score=160.13 Aligned_cols=131 Identities=22% Similarity=0.244 Sum_probs=77.9
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
+++.|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|++|+|+
T Consensus 86 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 165 (272)
T 3rfs_A 86 NLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLS 165 (272)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECC
Confidence 46666666666665555555666666666666666665555555666666666666666664444455666666666666
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGP 205 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~ 205 (623)
+|++++..+..+..+++|+.|+|++|++++.+|..+. +.+++.+|++.|.+
T Consensus 166 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 221 (272)
T 3rfs_A 166 YNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 221 (272)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccC
Confidence 6666655555556666666666666666655554322 34556666665544
No 274
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.68 E-value=3.5e-17 Score=168.75 Aligned_cols=148 Identities=14% Similarity=0.072 Sum_probs=103.4
Q ss_pred HHHHhcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccc-------------cchHHHHHHHHHHhhcCCCceee
Q 006968 296 LRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-------------GGEVQFQTEVETISLAVHRNLLR 362 (623)
Q Consensus 296 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~e~~~l~~l~H~niv~ 362 (623)
+.....-|.+.+.||+|+||.||+|...+|+.||||+++..... .....+..++++.....|+|+.+
T Consensus 90 L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~r 169 (397)
T 4gyi_A 90 HAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKA 169 (397)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence 33333348899999999999999999989999999998643211 01112333333333344555554
Q ss_pred eeeeeec------CCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCe
Q 006968 363 LCGFCST------ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANI 436 (623)
Q Consensus 363 l~~~~~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NI 436 (623)
++..... ....++||||++++.|..+... .....++.|++.+|.|||+. +||||||||.||
T Consensus 170 L~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NI 236 (397)
T 4gyi_A 170 LYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH---GLIHGDFNEFNI 236 (397)
T ss_dssp HHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSE
T ss_pred HHhcCCCCCeeeeccCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHE
Confidence 4332211 1234799999998887654321 12356789999999999999 999999999999
Q ss_pred EECCCC----------cEEEeecccccccC
Q 006968 437 LLDEDF----------EAVVGDFGLAKLLD 456 (623)
Q Consensus 437 ll~~~~----------~~kl~Dfgla~~~~ 456 (623)
|+++++ .+.|+||+-+....
T Consensus 237 Ll~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 237 LIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred EEeCCCCcccccccccceEEEEeCCcccCC
Confidence 998776 38999999887543
No 275
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=1.1e-16 Score=151.10 Aligned_cols=125 Identities=24% Similarity=0.342 Sum_probs=85.7
Q ss_pred EEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhccccc
Q 006968 78 ALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNS 157 (623)
Q Consensus 78 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 157 (623)
.+++++|+|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 3555666666 4555442 46777777777777 566777777777777777777776656667777777777777777
Q ss_pred cCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCCCC
Q 006968 158 LTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGPK 206 (623)
Q Consensus 158 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~~ 206 (623)
|++..|..|..+++|+.|+|++|+|++..+..+. +.+++++|++.|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 7766666677777777777777777755554332 456677777777654
No 276
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=1.5e-16 Score=150.27 Aligned_cols=123 Identities=23% Similarity=0.299 Sum_probs=111.1
Q ss_pred CCCcceeeeCCC----------CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecC
Q 006968 62 PCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSN 131 (623)
Q Consensus 62 ~c~w~gv~c~~~----------~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 131 (623)
.|.|..|.|+.. ..++.|+|++|+|+ .+|..|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 9 ~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 9 TCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 467788888642 37999999999998 7889999999999999999999988888999999999999999
Q ss_pred CCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCc
Q 006968 132 NKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGS 185 (623)
Q Consensus 132 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 185 (623)
|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 999987778899999999999999999966666799999999999999999853
No 277
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.67 E-value=6.8e-17 Score=168.39 Aligned_cols=141 Identities=26% Similarity=0.323 Sum_probs=109.8
Q ss_pred CCcceeeeCCC----------CcEEEEeCCCCCcccccCcccc-CCCCcceEEeecCCCCCCCCCccCCCCCccEEEecC
Q 006968 63 CSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIG-NLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSN 131 (623)
Q Consensus 63 c~w~gv~c~~~----------~~v~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 131 (623)
|.+..|.|... ..++.|+|++|+|++..+..+. ++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 56777888642 3578899999999877777777 888999999999999877777888888999999999
Q ss_pred CCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCc---c-----ccccccCCCCCC
Q 006968 132 NKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKIS---A-----RTFKVTGNPLIC 203 (623)
Q Consensus 132 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~---~-----~~~~~~~n~~~~ 203 (623)
|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+ . +.+++++|.+..
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99886666678888888888888888887777888888888888888888886444432 0 345666666543
No 278
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.67 E-value=2.4e-16 Score=158.97 Aligned_cols=130 Identities=25% Similarity=0.235 Sum_probs=79.3
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.|+|++|+|+ .+|..+.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 78 ~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 156 (290)
T 1p9a_G 78 VLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLA 156 (290)
T ss_dssp TCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred cCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECC
Confidence 4666666666665 455566666666666666666665555666666666666666666665444555666666666666
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICGP 205 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~~ 205 (623)
+|+|++..+..|..+++|+.|+|++|+|+..++..+. +.+.+.+||+.|.|
T Consensus 157 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 157 NNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp TSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 6666644334455666666666666666633222221 34556667766654
No 279
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.66 E-value=3.4e-16 Score=156.15 Aligned_cols=129 Identities=22% Similarity=0.253 Sum_probs=81.1
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
+++.|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 62 ~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 141 (270)
T 2o6q_A 62 KLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLG 141 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECC
Confidence 56777777777765444455667777777777777765555556666777777777777765555556666666677776
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLIC 203 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~ 203 (623)
+|++++..+..|..+++|+.|+|++|++++..+..+. +.+++++|.+..
T Consensus 142 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (270)
T 2o6q_A 142 YNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc
Confidence 6666644444466666666666666666655444322 445566665543
No 280
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.65 E-value=2.1e-16 Score=177.04 Aligned_cols=131 Identities=18% Similarity=0.141 Sum_probs=116.0
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
..++.|||++|+|++..+..|.++++|++|+|++|+|++..|.+|.+|++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 37999999999999877789999999999999999999888889999999999999999999655677999999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcC-cCCCCcc-----ccccccCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSG-SLPKISA-----RTFKVTGNPLICG 204 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~-----~~~~~~~n~~~~~ 204 (623)
++|++++..+..|+++++|+.|+|++|.+++ .+|..+. +.+++++|.+...
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 188 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 188 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccc
Confidence 9999997766789999999999999999986 4565543 5678899987544
No 281
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.65 E-value=3.5e-16 Score=168.26 Aligned_cols=133 Identities=21% Similarity=0.209 Sum_probs=123.6
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.|+|++|++++.+|..++++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|++|+|+
T Consensus 276 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 355 (455)
T 3v47_A 276 GVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLS 355 (455)
T ss_dssp CCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECC
T ss_pred CceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECC
Confidence 79999999999999999999999999999999999999889999999999999999999998888999999999999999
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGPKA 207 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~~~ 207 (623)
+|++++..|..|..+++|+.|+|++|+|++.++..+. +.+++++|++.|.++.
T Consensus 356 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 356 YNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 9999988899999999999999999999987665543 6789999999998763
No 282
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.64 E-value=2.6e-16 Score=158.34 Aligned_cols=128 Identities=23% Similarity=0.267 Sum_probs=78.6
Q ss_pred cEEEEeCCCCC-cccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 75 YVSALGLPSQS-LSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 75 ~v~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.++.|+|++|. +++..+..+.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..+..+++|++|+|
T Consensus 81 ~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 160 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (285)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEEC
Confidence 56666666665 55444566666666666666666666655666666666666666666666444445666666666666
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLI 202 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~ 202 (623)
++|++++..+..+..+++|+.|+|++|.+++..|..+. +.+++++|.+.
T Consensus 161 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 214 (285)
T 1ozn_A 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 214 (285)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCC
Confidence 66666644444566666666666666666655554432 34555555553
No 283
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.63 E-value=5e-16 Score=149.93 Aligned_cols=114 Identities=20% Similarity=0.255 Sum_probs=107.6
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|
T Consensus 57 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 136 (220)
T 2v70_A 57 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSL 136 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEEC
T ss_pred CCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEEC
Confidence 37999999999999888889999999999999999999888888999999999999999999888999999999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLP 187 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 187 (623)
++|+|++..|..|..+++|+.|+|++|++++..+
T Consensus 137 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 137 YDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999998889999999999999999999997654
No 284
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.63 E-value=4.9e-16 Score=157.98 Aligned_cols=128 Identities=19% Similarity=0.263 Sum_probs=74.5
Q ss_pred cEEEEeCCCCCcccccC-ccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCC-CCCccccCCCCccchh
Q 006968 75 YVSALGLPSQSLSGTLS-PWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTG-EIPDSLGDLGNLNYLR 152 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ 152 (623)
.++.|+|++|++++..+ ..+.++++|++|+|++|.+++..|..+.++++|++|+|++|.+++ .+|..+..+++|++|+
T Consensus 102 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 181 (306)
T 2z66_A 102 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 181 (306)
T ss_dssp TCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEE
Confidence 56666666666664433 355666666666666666665555556666666666666666654 3555666666666666
Q ss_pred ccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCC
Q 006968 153 LNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLI 202 (623)
Q Consensus 153 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~ 202 (623)
|++|++++..|..+..+++|+.|+|++|++++..+..+. +.+++++|++.
T Consensus 182 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 236 (306)
T 2z66_A 182 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236 (306)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCC
T ss_pred CCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCc
Confidence 666666655555566666666666666666554332221 34555555543
No 285
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=1.3e-15 Score=141.64 Aligned_cols=128 Identities=21% Similarity=0.239 Sum_probs=110.2
Q ss_pred EEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhccc
Q 006968 76 VSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNN 155 (623)
Q Consensus 76 v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 155 (623)
.+.+++++|+++ .+|..+ .++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..+..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 468999999998 566544 47999999999999977777889999999999999999966666789999999999999
Q ss_pred cccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCCCC
Q 006968 156 NSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGPK 206 (623)
Q Consensus 156 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~~ 206 (623)
|+|++..+..+..+++|+.|+|++|+|++.++..+. +.+++++|++.|.++
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999977777789999999999999999977665533 568899999988654
No 286
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=9.2e-16 Score=141.36 Aligned_cols=129 Identities=24% Similarity=0.253 Sum_probs=110.9
Q ss_pred CcEEEEeCCCCCcc-cccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchh
Q 006968 74 GYVSALGLPSQSLS-GTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLR 152 (623)
Q Consensus 74 ~~v~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (623)
.+++.|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 37999999999998 88999999999999999999999965 7899999999999999999987898888899999999
Q ss_pred ccccccCCCC-CcccCCCCcccEEECCCCcCcCcCC---CCcc-----ccccccCCCCCCC
Q 006968 153 LNNNSLTGSC-PESLSKIESLTLVDLSYNNLSGSLP---KISA-----RTFKVTGNPLICG 204 (623)
Q Consensus 153 l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p---~~~~-----~~~~~~~n~~~~~ 204 (623)
|++|++++.. +..+..+++|+.|++++|++++..+ ..+. +.+++.+|.....
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 9999999532 2789999999999999999997665 2222 5567777765433
No 287
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.62 E-value=8e-16 Score=164.79 Aligned_cols=132 Identities=21% Similarity=0.172 Sum_probs=111.9
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
..++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 46899999999999888899999999999999999999888889999999999999999999665667999999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCC-Ccc-----ccccccCCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPK-ISA-----RTFKVTGNPLICGP 205 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~-----~~~~~~~n~~~~~~ 205 (623)
++|++++..+..|..+++|+.|+|++|+..+.+|. .+. +.+++++|.+...+
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 201 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP 201 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc
Confidence 99999976667889999999999998655555554 222 56778888775443
No 288
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.61 E-value=2.3e-15 Score=151.34 Aligned_cols=141 Identities=21% Similarity=0.244 Sum_probs=120.2
Q ss_pred CCcceeeeCCC---CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCC-CCCCC
Q 006968 63 CSWRMITCSPD---GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNK-FTGEI 138 (623)
Q Consensus 63 c~w~gv~c~~~---~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~ 138 (623)
|++.|++..+. ..++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|. ++...
T Consensus 18 c~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~ 97 (285)
T 1ozn_A 18 CPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVD 97 (285)
T ss_dssp CCSSCCSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCC
T ss_pred cCcCCcccCCcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccC
Confidence 55555554432 479999999999998777889999999999999999998889999999999999999997 88666
Q ss_pred CccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCC
Q 006968 139 PDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLIC 203 (623)
Q Consensus 139 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~ 203 (623)
|..+..+++|++|+|++|.+++..|..+..+++|+.|+|++|++++..+..+. +.+++++|.+..
T Consensus 98 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 167 (285)
T 1ozn_A 98 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS 167 (285)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE
T ss_pred HHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccc
Confidence 88899999999999999999988788899999999999999999977666443 567888887643
No 289
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.60 E-value=1.7e-15 Score=162.84 Aligned_cols=131 Identities=18% Similarity=0.129 Sum_probs=113.5
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 47999999999999988999999999999999999999888899999999999999999999666677999999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCC-cc-----ccccccCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKI-SA-----RTFKVTGNPLICG 204 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~-----~~~~~~~n~~~~~ 204 (623)
++|++++..+..|.++++|+.|+|++|+..+.+|.. +. +.+++++|.+...
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 999999666668999999999999996555555542 22 5678888877544
No 290
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.60 E-value=1.3e-15 Score=163.72 Aligned_cols=144 Identities=22% Similarity=0.221 Sum_probs=123.4
Q ss_pred CCCCcce--eeeCCC---------CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCC-CCccCCCCCccEEE
Q 006968 61 DPCSWRM--ITCSPD---------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPI-PASLGKLEKLQTLD 128 (623)
Q Consensus 61 ~~c~w~g--v~c~~~---------~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 128 (623)
..|.|.+ |.|+.. .+++.|+|++|.|++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 3455544 777642 47999999999999988999999999999999999998665 56799999999999
Q ss_pred ecCCCCCCCCCccccCCCCccchhccccccCCCCCcc--cCCCCcccEEECCCCcCcCcCCCC-cc-----ccccccCCC
Q 006968 129 LSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPES--LSKIESLTLVDLSYNNLSGSLPKI-SA-----RTFKVTGNP 200 (623)
Q Consensus 129 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p~~-~~-----~~~~~~~n~ 200 (623)
|++|++++..|..|+++++|++|+|++|++++.+|.. +..+++|+.|+|++|++++..|.. +. +.+++++|.
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999866655 999999999999999999987764 22 567889998
Q ss_pred CCCC
Q 006968 201 LICG 204 (623)
Q Consensus 201 ~~~~ 204 (623)
+...
T Consensus 166 l~~~ 169 (455)
T 3v47_A 166 VKSI 169 (455)
T ss_dssp BSCC
T ss_pred cccc
Confidence 7543
No 291
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.60 E-value=3.2e-15 Score=149.57 Aligned_cols=128 Identities=18% Similarity=0.169 Sum_probs=107.2
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 58899999999997777788899999999999999987777788899999999999999997777888999999999999
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcC-cCCCCcc-----ccccccCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSG-SLPKISA-----RTFKVTGNPLI 202 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~-----~~~~~~~n~~~ 202 (623)
+|++++..+..+..+++|+.|+|++|.+++ .+|..+. +.+++++|.+.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~ 162 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCC
Confidence 999987666678889999999999999886 3566543 55677777654
No 292
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.59 E-value=2.8e-15 Score=167.29 Aligned_cols=131 Identities=18% Similarity=0.135 Sum_probs=114.5
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 47999999999999888889999999999999999999888889999999999999999999877999999999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcC-cCCCCcc-----ccccccCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSG-SLPKISA-----RTFKVTGNPLICG 204 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~-----~~~~~~~n~~~~~ 204 (623)
++|.+++..|..++++++|+.|+|++|.+++ .+|..+. +.+++++|.+...
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~ 168 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTI 168 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEE
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceec
Confidence 9999987776889999999999999999986 6676554 5677888876543
No 293
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.59 E-value=2.9e-15 Score=138.31 Aligned_cols=109 Identities=27% Similarity=0.311 Sum_probs=96.7
Q ss_pred EEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcccc
Q 006968 77 SALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNN 156 (623)
Q Consensus 77 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 156 (623)
+.|++++|+|+ .+|..+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 46777889998 577766 389999999999999888999999999999999999999666667899999999999999
Q ss_pred ccCCCCCcccCCCCcccEEECCCCcCcCcCCC
Q 006968 157 SLTGSCPESLSKIESLTLVDLSYNNLSGSLPK 188 (623)
Q Consensus 157 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 188 (623)
+|++..+..|..+++|+.|+|++|+++...++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 99976666799999999999999999977664
No 294
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.59 E-value=3e-15 Score=144.51 Aligned_cols=111 Identities=25% Similarity=0.262 Sum_probs=103.8
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+++.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 135 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSL 135 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEEC
Confidence 37999999999999988999999999999999999999666667899999999999999999888999999999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSG 184 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 184 (623)
++|+|++..+..|..+++|+.|+|++|++..
T Consensus 136 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 136 YDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 9999998777789999999999999999985
No 295
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.59 E-value=1.3e-15 Score=158.14 Aligned_cols=141 Identities=21% Similarity=0.265 Sum_probs=117.2
Q ss_pred CCCCCcceeeeCC------------CCcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEE
Q 006968 60 VDPCSWRMITCSP------------DGYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTL 127 (623)
Q Consensus 60 ~~~c~w~gv~c~~------------~~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 127 (623)
..+|.|.|+ |+. ..+++.|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 456777776 542 1379999999999998777789999999999999999998888899999999999
Q ss_pred EecCCCCCCCCCccccCCCCccchhccccccCCCCCc--ccCCCCcccEEECCCCc-CcCcCCCCcc-----ccccccCC
Q 006968 128 DLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPE--SLSKIESLTLVDLSYNN-LSGSLPKISA-----RTFKVTGN 199 (623)
Q Consensus 128 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~-l~~~~p~~~~-----~~~~~~~n 199 (623)
+|++|++++..+..+.++++|++|+|++|+++ .+|. .+..+++|+.|++++|+ +++..|..+. +.+++++|
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 99999999544444899999999999999999 4555 78999999999999995 6655555443 56788888
Q ss_pred CCC
Q 006968 200 PLI 202 (623)
Q Consensus 200 ~~~ 202 (623)
.+.
T Consensus 185 ~l~ 187 (353)
T 2z80_A 185 DLQ 187 (353)
T ss_dssp TCC
T ss_pred CcC
Confidence 764
No 296
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.59 E-value=2.9e-16 Score=178.13 Aligned_cols=124 Identities=27% Similarity=0.374 Sum_probs=97.7
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.|+|++|.|. .+|..+.++++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|++|++|++|+|+
T Consensus 225 ~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~ 301 (727)
T 4b8c_D 225 LWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFF 301 (727)
T ss_dssp CCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECC
T ss_pred CCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECC
Confidence 4667888888887 67777778888888888888888 77888888888888888888888 778888888888888888
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc------ccccccCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA------RTFKVTGNPLI 202 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~------~~~~~~~n~~~ 202 (623)
+|.|+ .+|..|..|++|+.|+|++|+|+|.+|..+. ..+.+.+|.+.
T Consensus 302 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~ 354 (727)
T 4b8c_D 302 DNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPE 354 (727)
T ss_dssp SSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCccc
Confidence 88887 7777788888888888888888887776553 12456677653
No 297
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.59 E-value=1.8e-15 Score=169.47 Aligned_cols=133 Identities=19% Similarity=0.261 Sum_probs=121.5
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCC-CCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAIL-GPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+..++++.|.+++..+..+..+++|+.|+|++|++. +.+|..|..+++|++|||++|+|++..|..|.++++|++|+|
T Consensus 446 ~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~L 525 (635)
T 4g8a_A 446 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 525 (635)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEEC
Confidence 6888999999999999999999999999999999854 467889999999999999999999888999999999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc------ccccccCCCCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA------RTFKVTGNPLICGPKA 207 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~------~~~~~~~n~~~~~~~~ 207 (623)
++|+|++..|..|..+++|+.|+|++|+|++.+|..+. +.+++++|||.|.|..
T Consensus 526 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 526 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp TTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 99999988888999999999999999999999887653 4578999999998763
No 298
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.58 E-value=7.8e-15 Score=146.43 Aligned_cols=129 Identities=27% Similarity=0.346 Sum_probs=114.2
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.|+|++|++++. +.+.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|++|+|+
T Consensus 64 ~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 141 (272)
T 3rfs_A 64 NVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLA 141 (272)
T ss_dssp TCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECC
Confidence 799999999999963 478999999999999999998888889999999999999999997777778999999999999
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGP 205 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~ 205 (623)
+|++++..+..+..+++|+.|+|++|++++..|..+. +.+++++|.+...+
T Consensus 142 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (272)
T 3rfs_A 142 HNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVP 197 (272)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccC
Confidence 9999977777789999999999999999987776543 66889999876443
No 299
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.58 E-value=2.6e-15 Score=154.22 Aligned_cols=126 Identities=22% Similarity=0.342 Sum_probs=110.9
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCC---------CCCccEEEecCCCCCCCCCccccCC
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGK---------LEKLQTLDLSNNKFTGEIPDSLGDL 145 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~p~~~~~l 145 (623)
+++.|+|++|.++ .+|..++++++|++|+|++|++.+.+|..+.. +++|++|+|++|+|+ .+|..++.+
T Consensus 128 ~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l 205 (328)
T 4fcg_A 128 GLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANL 205 (328)
T ss_dssp TCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGC
T ss_pred CCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCC
Confidence 7999999999999 88999999999999999999999899988765 999999999999999 899999999
Q ss_pred CCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCC
Q 006968 146 GNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLIC 203 (623)
Q Consensus 146 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~ 203 (623)
++|++|+|++|+++ .+|..+..+++|+.|+|++|++.+.+|..+. +.+++++|++..
T Consensus 206 ~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 267 (328)
T 4fcg_A 206 QNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL 267 (328)
T ss_dssp TTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCC
T ss_pred CCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchh
Confidence 99999999999999 4777899999999999999999998887654 567788877643
No 300
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=1.3e-15 Score=137.33 Aligned_cols=111 Identities=27% Similarity=0.311 Sum_probs=102.3
Q ss_pred cEEEEeCCCCCcc-cccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 75 YVSALGLPSQSLS-GTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 75 ~v~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
+++.|+|++|+++ +.+|..+..+++|++|+|++|++++. ..+.++++|++|+|++|++++.+|..+..+++|++|+|
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 7999999999999 88999999999999999999999966 78999999999999999999879998889999999999
Q ss_pred cccccCCC-CCcccCCCCcccEEECCCCcCcCcCC
Q 006968 154 NNNSLTGS-CPESLSKIESLTLVDLSYNNLSGSLP 187 (623)
Q Consensus 154 ~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p 187 (623)
++|++++. .+..+..+++|+.|++++|++++..+
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 99999963 34789999999999999999997655
No 301
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.58 E-value=5.3e-15 Score=149.08 Aligned_cols=129 Identities=24% Similarity=0.199 Sum_probs=95.8
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
..++.|+|++|+|++..+..|.++++|++|+|++|+|++. |. ...+++|++|+|++|+|+ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cC-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 3688888888888877778888888888888888888753 33 267777888888888887 67777777788888888
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGP 205 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~ 205 (623)
++|+|++..|..|..+++|+.|+|++|+|++.++..+. +.+++++|.+...+
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 164 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELP 164 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccC
Confidence 88888766566777778888888888888766555432 45677777765433
No 302
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.58 E-value=6.8e-15 Score=136.36 Aligned_cols=109 Identities=26% Similarity=0.277 Sum_probs=96.7
Q ss_pred EEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcccc
Q 006968 77 SALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNN 156 (623)
Q Consensus 77 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 156 (623)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67899999997 7887764 89999999999999888999999999999999999999655556789999999999999
Q ss_pred ccCCCCCcccCCCCcccEEECCCCcCcCcCCC
Q 006968 157 SLTGSCPESLSKIESLTLVDLSYNNLSGSLPK 188 (623)
Q Consensus 157 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 188 (623)
+|++..+..|..+++|+.|+|++|+|....++
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~ 123 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECRD 123 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBGG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccccc
Confidence 99966555699999999999999999966553
No 303
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.58 E-value=1.7e-15 Score=166.85 Aligned_cols=140 Identities=18% Similarity=0.240 Sum_probs=120.8
Q ss_pred CCCcceeeeCCC------------CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEe
Q 006968 62 PCSWRMITCSPD------------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDL 129 (623)
Q Consensus 62 ~c~w~gv~c~~~------------~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 129 (623)
.|.|.|+ |+.. ..++.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4888887 7521 37999999999999988999999999999999999999888899999999999999
Q ss_pred cCCCCCCCCCccccCCCCccchhccccccCC-CCCcccCCCCcccEEECCCCcCcCcCCC-Ccc-----ccccccCCCCC
Q 006968 130 SNNKFTGEIPDSLGDLGNLNYLRLNNNSLTG-SCPESLSKIESLTLVDLSYNNLSGSLPK-ISA-----RTFKVTGNPLI 202 (623)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~-----~~~~~~~n~~~ 202 (623)
++|++++..|..|+++++|++|+|++|.+++ .+|..+.++++|+.|++++|.+.+.+|. .+. +.+++++|.+.
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 9999997777779999999999999999986 4678899999999999999996666653 332 56778888764
No 304
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.57 E-value=7.5e-15 Score=140.30 Aligned_cols=126 Identities=23% Similarity=0.222 Sum_probs=109.2
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+++.|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..+..+++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 131 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRL 131 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEEC
Confidence 37999999999999776777899999999999999999777777899999999999999999766667899999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCccccccccCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISARTFKVTGNPL 201 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~n~~ 201 (623)
++|++++..+..+..+++|+.|+|++|.+.+..|.+ +.+.+.+|.+
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l--~~L~~~~n~~ 177 (208)
T 2o6s_A 132 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGI--RYLSEWINKH 177 (208)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTTT--HHHHHHHHHC
T ss_pred CCCccceeCHHHhccCCCccEEEecCCCeecCCCCH--HHHHHHHHhC
Confidence 999999766667899999999999999999988754 3344444443
No 305
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.57 E-value=5.4e-15 Score=160.05 Aligned_cols=141 Identities=16% Similarity=0.169 Sum_probs=122.7
Q ss_pred CcceeeeCCC----------CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCC
Q 006968 64 SWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNK 133 (623)
Q Consensus 64 ~w~gv~c~~~----------~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 133 (623)
.|..|.|... ..++.|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 3667777632 378999999999998888999999999999999999998889999999999999999999
Q ss_pred CCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCC
Q 006968 134 FTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICG 204 (623)
Q Consensus 134 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~ 204 (623)
+++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+++..|..+. +.+++++|.+...
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 167 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 167 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSC
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCccc
Confidence 9955556789999999999999999988888999999999999999999987776544 5677888876543
No 306
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.57 E-value=2.8e-15 Score=167.34 Aligned_cols=132 Identities=19% Similarity=0.215 Sum_probs=90.4
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCC-CCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILG-PIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.++.|+|++|.+++..|..+.++++|++|+|++|++++ .+|..|.++++|++|+|++|++++..|..+..+++|++|+|
T Consensus 425 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 504 (606)
T 3vq2_A 425 KLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNM 504 (606)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEEC
Confidence 56666777777766666667777777777777777765 35666777777777777777777666677777777777777
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc------ccccccCCCCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA------RTFKVTGNPLICGPKA 207 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~------~~~~~~~n~~~~~~~~ 207 (623)
++|++++..|..+..+++|+.|+|++|+|+. +|..+. +.+++++|++.|.++.
T Consensus 505 s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 505 SHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 7777776667777777777777777777773 333221 4456777777776653
No 307
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.57 E-value=1.1e-14 Score=141.29 Aligned_cols=114 Identities=25% Similarity=0.234 Sum_probs=104.7
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
..++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|
T Consensus 64 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 142 (229)
T 3e6j_A 64 INLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLAL 142 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEEC
T ss_pred cCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEEC
Confidence 37999999999998666677899999999999999999777777899999999999999999 89999999999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPK 188 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 188 (623)
++|+|++..+..|..+++|+.|+|++|.+++..+.
T Consensus 143 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 177 (229)
T 3e6j_A 143 DQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECRD 177 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBGG
T ss_pred CCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcch
Confidence 99999976667899999999999999999987663
No 308
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.56 E-value=4.5e-15 Score=148.43 Aligned_cols=114 Identities=21% Similarity=0.259 Sum_probs=84.8
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..+..+++|++|+|+
T Consensus 53 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 132 (276)
T 2z62_A 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 132 (276)
T ss_dssp TCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECC
T ss_pred CCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECc
Confidence 67778888888776666677777888888888888776666777777778888888777776555567777777777777
Q ss_pred ccccCC-CCCcccCCCCcccEEECCCCcCcCcCCC
Q 006968 155 NNSLTG-SCPESLSKIESLTLVDLSYNNLSGSLPK 188 (623)
Q Consensus 155 ~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 188 (623)
+|++++ .+|..+..+++|+.|+|++|++++..+.
T Consensus 133 ~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 133 HNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp SSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred CCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 777775 3577777777777777777777765443
No 309
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.56 E-value=2.4e-15 Score=174.30 Aligned_cols=131 Identities=24% Similarity=0.281 Sum_probs=94.1
Q ss_pred cEEEEeCCCCCcccccCc-cccCCCCcceEEeecCCCC-----CCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCc
Q 006968 75 YVSALGLPSQSLSGTLSP-WIGNLTKLQSVLLQNNAIL-----GPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNL 148 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 148 (623)
+++.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..|.++++|+.|+|++|+|++..|..|..+++|
T Consensus 427 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 506 (844)
T 3j0a_A 427 HLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTAL 506 (844)
T ss_dssp TCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSC
T ss_pred ccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhh
Confidence 456666666666643332 3445666777777777765 3344567778888888888888887777778888888
Q ss_pred cchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc--ccccccCCCCCCCCCC
Q 006968 149 NYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA--RTFKVTGNPLICGPKA 207 (623)
Q Consensus 149 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~~~~~~n~~~~~~~~ 207 (623)
+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..+. ..+++++||+.|.|..
T Consensus 507 ~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 507 RGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp SEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred heeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 8888888888865555554 7888888888888888887654 5688999999998763
No 310
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.56 E-value=5.3e-15 Score=164.67 Aligned_cols=152 Identities=13% Similarity=0.111 Sum_probs=110.2
Q ss_pred ccCCCCCCCCCCCC----cceeeeCC------C-----------CcEEEEeCCCCCcccccCccccCCCCcceEEeecCC
Q 006968 51 VLENWDITSVDPCS----WRMITCSP------D-----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNA 109 (623)
Q Consensus 51 ~~~~w~~~~~~~c~----w~gv~c~~------~-----------~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 109 (623)
.+++|.. +.+||. |.++.|.. . ..++.|++++|.+++..+..+.++++|++|+|++|.
T Consensus 8 ~l~~~~~-~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~ 86 (597)
T 3oja_B 8 NVKPRQP-EYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQ 86 (597)
T ss_dssp ---CCCS-EECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSC
T ss_pred cccCCCC-CCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCC
Confidence 4677863 455663 66655541 0 246778888888876555567778888888888888
Q ss_pred CCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCC
Q 006968 110 ILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKI 189 (623)
Q Consensus 110 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 189 (623)
+++..|..|.++++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|.++++|+.|+|++|.|++.+|..
T Consensus 87 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 166 (597)
T 3oja_B 87 IEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDT 166 (597)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTT
T ss_pred CCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhh
Confidence 88777778888888888888888888777777888888888888888888544445688888888888888888777764
Q ss_pred cc-----ccccccCCCCCC
Q 006968 190 SA-----RTFKVTGNPLIC 203 (623)
Q Consensus 190 ~~-----~~~~~~~n~~~~ 203 (623)
+. +.+++++|.+..
T Consensus 167 ~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 167 FQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp TTTCTTCCEEECTTSCCSB
T ss_pred hhcCCcCcEEECcCCCCCC
Confidence 43 556777777643
No 311
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.55 E-value=2.2e-15 Score=153.10 Aligned_cols=141 Identities=22% Similarity=0.246 Sum_probs=117.5
Q ss_pred CCCCcceeeeCCC----------CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCC--CCCCccCCCCCccEEE
Q 006968 61 DPCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILG--PIPASLGKLEKLQTLD 128 (623)
Q Consensus 61 ~~c~w~gv~c~~~----------~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ 128 (623)
..|.|.+|.|+.. ..++.|+|++|+++...+..|.++++|++|+|++|+++. ..|..+..+++|++|+
T Consensus 5 C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 5 CSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred CeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 3479999999753 379999999999995545568999999999999999983 3366777899999999
Q ss_pred ecCCCCCCCCCccccCCCCccchhccccccCCCCC-cccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCC
Q 006968 129 LSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCP-ESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLI 202 (623)
Q Consensus 129 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~ 202 (623)
|++|.++ .+|..+..+++|++|+|++|++++..+ ..+..+++|+.|++++|.+++.+|..+. +.+++++|.+.
T Consensus 85 Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 163 (306)
T 2z66_A 85 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 163 (306)
T ss_dssp CCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEG
T ss_pred CCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccc
Confidence 9999999 688889999999999999999986544 5788999999999999999988776543 56778888764
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.55 E-value=1e-14 Score=156.20 Aligned_cols=130 Identities=24% Similarity=0.285 Sum_probs=89.4
Q ss_pred cEEEEeCCCCCcccccCccc-------------------------cCCCCcceEEeecCCCCCCCCCccCCCCCccEEEe
Q 006968 75 YVSALGLPSQSLSGTLSPWI-------------------------GNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDL 129 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~-------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 129 (623)
+++.|+|++|.|++..+..| .++++|++|+|++|+++ .+| .+..+++|++|+|
T Consensus 137 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~L 214 (440)
T 3zyj_A 137 KLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDL 214 (440)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEEC
T ss_pred cCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEEC
Confidence 67888888888775444444 44555555555556555 344 3566667777777
Q ss_pred cCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCC
Q 006968 130 SNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICG 204 (623)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~ 204 (623)
++|+|++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+. +.+++++||+.|.
T Consensus 215 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 215 SGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred CCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 77777766677777777777777777777766677777778888888888888766655443 4577888888887
Q ss_pred CC
Q 006968 205 PK 206 (623)
Q Consensus 205 ~~ 206 (623)
|.
T Consensus 295 C~ 296 (440)
T 3zyj_A 295 CD 296 (440)
T ss_dssp ST
T ss_pred CC
Confidence 64
No 313
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.54 E-value=2.5e-14 Score=147.10 Aligned_cols=140 Identities=24% Similarity=0.324 Sum_probs=120.6
Q ss_pred CCCcceeeeCCC----------CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecC
Q 006968 62 PCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSN 131 (623)
Q Consensus 62 ~c~w~gv~c~~~----------~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 131 (623)
.|.|+.+.|+.. ..++.|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 378999999742 3799999999999988888999999999999999999988899999999999999999
Q ss_pred CCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCc--CcCCCCcc----ccccccCCCCCCC
Q 006968 132 NKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLS--GSLPKISA----RTFKVTGNPLICG 204 (623)
Q Consensus 132 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~p~~~~----~~~~~~~n~~~~~ 204 (623)
|+++ .+|..+. ++|++|+|++|++++..+..|..+++|+.|++++|.++ +..|..+. +.+++++|.+...
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l 187 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGI 187 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSC
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCcc
Confidence 9999 7888776 89999999999999766667999999999999999996 35555433 5677888876543
No 314
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.53 E-value=6.9e-15 Score=143.80 Aligned_cols=128 Identities=21% Similarity=0.268 Sum_probs=110.7
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCC-CCCCCCCccCCCCCccEEEecC-CCCCCCCCccccCCCCccch
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNA-ILGPIPASLGKLEKLQTLDLSN-NKFTGEIPDSLGDLGNLNYL 151 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 151 (623)
..++.|+|++|+|++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 479999999999998777799999999999999997 8866667899999999999999 99996666789999999999
Q ss_pred hccccccCCCCCcccCCCCccc---EEECCCC-cCcCcCCCCcc-----c-cccccCCCCCC
Q 006968 152 RLNNNSLTGSCPESLSKIESLT---LVDLSYN-NLSGSLPKISA-----R-TFKVTGNPLIC 203 (623)
Q Consensus 152 ~l~~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~p~~~~-----~-~~~~~~n~~~~ 203 (623)
+|++|++++ +|. +..+++|+ .|++++| .+++..+..+. + .+++++|.+..
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~ 170 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS 170 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCE
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcc
Confidence 999999995 776 88888888 9999999 99876665443 4 67788887753
No 315
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.53 E-value=1.7e-14 Score=161.03 Aligned_cols=130 Identities=18% Similarity=0.136 Sum_probs=117.5
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
..++.|+|++|+|++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 47999999999999888999999999999999999999988999999999999999999999888999999999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcC-cCCCCcc----ccccccCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSG-SLPKISA----RTFKVTGNPLIC 203 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~----~~~~~~~n~~~~ 203 (623)
++|++++..|..+.++++|+.|+|++|++++ .+|.... +.+++++|.+..
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 167 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY 167 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCE
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccc
Confidence 9999997667889999999999999999997 4455433 567888887653
No 316
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.53 E-value=8.4e-15 Score=163.44 Aligned_cols=130 Identities=28% Similarity=0.347 Sum_probs=69.0
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCC---CCCccCCCCCccEEEecCCCCCCCCCccccCCCCccch
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGP---IPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYL 151 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 151 (623)
.++.|+|++|.+++..|..+.++++|++|+|++|++++. .+..+..+++|++|+|++|++++..|..|..+++|++|
T Consensus 426 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 505 (606)
T 3t6q_A 426 LLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHV 505 (606)
T ss_dssp TCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEE
Confidence 344455555555444444455555555555555555431 12334555555555555555554445555555555555
Q ss_pred hccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCCC
Q 006968 152 RLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGP 205 (623)
Q Consensus 152 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~ 205 (623)
+|++|++++..|..+.++++| .|+|++|++++.+|..+. +.+++++|++.|.+
T Consensus 506 ~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 506 DLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp ECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred ECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 555555555555555555555 555555555555554322 44566666666654
No 317
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.53 E-value=1.8e-14 Score=154.71 Aligned_cols=130 Identities=24% Similarity=0.276 Sum_probs=96.2
Q ss_pred cEEEEeCCCCCcccccCcc-------------------------ccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEe
Q 006968 75 YVSALGLPSQSLSGTLSPW-------------------------IGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDL 129 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~-------------------------~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 129 (623)
+++.|+|++|+|++..+.. |.++++|++|+|++|++++ +| .+..+++|++|+|
T Consensus 148 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~L 225 (452)
T 3zyi_A 148 KLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEM 225 (452)
T ss_dssp TCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEEC
Confidence 6888888888887544434 4455566666666666663 34 3667777777777
Q ss_pred cCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCC
Q 006968 130 SNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICG 204 (623)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~ 204 (623)
++|+|++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+. +.+++++|++.|.
T Consensus 226 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 226 SGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp TTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred cCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 77887777777888888888888888888877777888888888888888888866665543 5678888888887
Q ss_pred CC
Q 006968 205 PK 206 (623)
Q Consensus 205 ~~ 206 (623)
|.
T Consensus 306 C~ 307 (452)
T 3zyi_A 306 CD 307 (452)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 318
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.52 E-value=1.2e-14 Score=152.92 Aligned_cols=130 Identities=15% Similarity=0.141 Sum_probs=106.5
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
..++.|++++|.++...+..+.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 36788899999988544455788999999999999999777778999999999999999999777788899999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLIC 203 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~ 203 (623)
++|++++..+..|..+++|+.|+|++|++++..|..+. +.+++++|.+..
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 99999844334468899999999999999987776443 567788887643
No 319
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.52 E-value=1.3e-14 Score=160.54 Aligned_cols=130 Identities=20% Similarity=0.313 Sum_probs=65.3
Q ss_pred EEEEeCCCCCcccccC-ccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCC-CCCCccccCCCCccchhc
Q 006968 76 VSALGLPSQSLSGTLS-PWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFT-GEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 76 v~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l 153 (623)
++.|+|++|.+++..+ ..+.++++|++|+|++|++++..|..+.++++|++|+|++|+++ +.+|..+..+++|++|+|
T Consensus 398 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l 477 (570)
T 2z63_A 398 LEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 477 (570)
T ss_dssp CCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred CCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEEC
Confidence 3334444444443333 23444555555555555555444555555555555555555554 345555555555555555
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGP 205 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~ 205 (623)
++|++++..|..+..+++|+.|+|++|++++.+|..+. +.+++++|++.|.+
T Consensus 478 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 478 SQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 55555544455555555555555555555554444322 34455555555544
No 320
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.52 E-value=2.9e-14 Score=161.30 Aligned_cols=130 Identities=22% Similarity=0.227 Sum_probs=108.0
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+++.|+|++|+|++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 47899999999999877778899999999999999999888888888999999999999998444446888999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLIC 203 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~ 203 (623)
++|++++..|..|.++++|++|+|++|.+++.+|..+. +.+++++|.+..
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 159 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQA 159 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccc
Confidence 99999876677888999999999999999887776543 556777776643
No 321
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.51 E-value=4.3e-14 Score=145.18 Aligned_cols=139 Identities=23% Similarity=0.359 Sum_probs=119.4
Q ss_pred CCCcceeeeCCC----------CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecC
Q 006968 62 PCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSN 131 (623)
Q Consensus 62 ~c~w~gv~c~~~----------~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 131 (623)
.|.|+.+.|+.. ..++.|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 468999999742 3789999999999987777999999999999999999988899999999999999999
Q ss_pred CCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcC--cCCCCcc-----ccccccCCCCCC
Q 006968 132 NKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSG--SLPKISA-----RTFKVTGNPLIC 203 (623)
Q Consensus 132 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~-----~~~~~~~n~~~~ 203 (623)
|+++ .+|..+. ++|++|++++|++++..+..+..+++|+.|++++|.++. ..+..+. +.+++++|.+..
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 9999 7887765 799999999999997777789999999999999999963 4554433 557778887643
No 322
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.51 E-value=5e-15 Score=166.02 Aligned_cols=131 Identities=22% Similarity=0.381 Sum_probs=119.5
Q ss_pred CcEEEEeCCCCCcccc-----------------cCcccc--CCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCC-
Q 006968 74 GYVSALGLPSQSLSGT-----------------LSPWIG--NLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNK- 133 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~- 133 (623)
.+++.|+|++|.|+|. +|..++ ++++|++|+|++|++.|.+|..|+++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~ 285 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRG 285 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCC
Confidence 4799999999999996 999999 99999999999999999999999999999999999999
Q ss_pred CCC-CCCccccCC------CCccchhccccccCCCCCc--ccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCC
Q 006968 134 FTG-EIPDSLGDL------GNLNYLRLNNNSLTGSCPE--SLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNP 200 (623)
Q Consensus 134 l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~ 200 (623)
++| .+|..++++ ++|++|+|++|+++ .+|. .+.++++|+.|+|++|+++|.+|.+.. +.+++++|.
T Consensus 286 l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N~ 364 (636)
T 4eco_A 286 ISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQ 364 (636)
T ss_dssp SCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSSE
T ss_pred CccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCCc
Confidence 998 899999887 99999999999999 8998 999999999999999999999993322 567888888
Q ss_pred CCCCC
Q 006968 201 LICGP 205 (623)
Q Consensus 201 ~~~~~ 205 (623)
+...+
T Consensus 365 l~~lp 369 (636)
T 4eco_A 365 ITEIP 369 (636)
T ss_dssp EEECC
T ss_pred ccccc
Confidence 76433
No 323
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.51 E-value=2.4e-14 Score=165.84 Aligned_cols=139 Identities=21% Similarity=0.213 Sum_probs=106.7
Q ss_pred CCcceeeeCCCCcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCC-CCccCCCCCccEEEecCCCCCCCCCcc
Q 006968 63 CSWRMITCSPDGYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPI-PASLGKLEKLQTLDLSNNKFTGEIPDS 141 (623)
Q Consensus 63 c~w~gv~c~~~~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 141 (623)
|.|..|.+ -..+++.|+|++|.|++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|+|++..|..
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 45666666 3457889999999998888888888888888888888666555 777888888888888888888777888
Q ss_pred ccCCCCccchhccccccCCCCCcc--cCCCCcccEEECCCCcCcCcCCC-Ccc-----ccccccCCCCC
Q 006968 142 LGDLGNLNYLRLNNNSLTGSCPES--LSKIESLTLVDLSYNNLSGSLPK-ISA-----RTFKVTGNPLI 202 (623)
Q Consensus 142 ~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p~-~~~-----~~~~~~~n~~~ 202 (623)
|+++++|++|+|++|.+++.+|.. |.++++|+.|+|++|.+++..|. .+. +.+++++|.+.
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCC
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCC
Confidence 888888888888888888766654 78888888888888888776543 222 45666777653
No 324
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.50 E-value=2.2e-14 Score=157.86 Aligned_cols=110 Identities=26% Similarity=0.321 Sum_probs=102.1
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 58899999999996 676 999999999999999999 889999999999999999999995 77 89999999999999
Q ss_pred ccccCCCC-CcccCCCCcccEEECCCCcCcCcCCCC
Q 006968 155 NNSLTGSC-PESLSKIESLTLVDLSYNNLSGSLPKI 189 (623)
Q Consensus 155 ~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~ 189 (623)
+|+|++.. |..|..+++|+.|+|++|+|++.+|..
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 99999776 999999999999999999999877643
No 325
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=6.5e-14 Score=129.20 Aligned_cols=105 Identities=24% Similarity=0.260 Sum_probs=92.8
Q ss_pred CcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECC
Q 006968 99 KLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLS 178 (623)
Q Consensus 99 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 178 (623)
..+.|++++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3578999999999 5887774 899999999999998889999999999999999999997777778999999999999
Q ss_pred CCcCcCcCCCCcc-----ccccccCCCCCCCCC
Q 006968 179 YNNLSGSLPKISA-----RTFKVTGNPLICGPK 206 (623)
Q Consensus 179 ~N~l~~~~p~~~~-----~~~~~~~n~~~~~~~ 206 (623)
+|+|++..+..+. +.+++++|++.|.+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999987776543 578999999999864
No 326
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.48 E-value=3.2e-14 Score=134.72 Aligned_cols=103 Identities=17% Similarity=0.284 Sum_probs=55.5
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
+++.|+|++|+++ .+| .+..+++|++|+|++|.++ . +..+..+++|++|+|++|++++..|..++.+++|++|+|+
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 3555555555555 333 3555555555555555443 1 2245555555555555555555455555555555555555
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCc
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNN 181 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~ 181 (623)
+|++++..|..+..+++|+.|+|++|.
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 555554445555555555555555555
No 327
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.48 E-value=6.4e-14 Score=154.94 Aligned_cols=130 Identities=18% Similarity=0.153 Sum_probs=102.8
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 36888888888888777778888888888888888888777778888888888888888888666678888888888888
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcC-cCCCCcc-----ccccccCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSG-SLPKISA-----RTFKVTGNPLIC 203 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~-----~~~~~~~n~~~~ 203 (623)
++|++++..+..++++++|+.|+|++|.+++ .+|..+. +.+++++|.+..
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~ 163 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCE
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccce
Confidence 8888885544468888888888888888876 4566443 556777777643
No 328
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.48 E-value=8.5e-14 Score=154.92 Aligned_cols=129 Identities=20% Similarity=0.140 Sum_probs=113.0
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+++.|+|++|.|++..|..|+++++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 37999999999999988889999999999999999999988888999999999999999999554555799999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc--ccccccCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA--RTFKVTGNPLI 202 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~~~~~~n~~~ 202 (623)
++|.+++..|..|..+++|+.|+|++|.|++..+..+. ..+++++|.+.
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCS
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccc
Confidence 99999988888999999999999999999975433332 45667777653
No 329
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.48 E-value=7e-14 Score=154.52 Aligned_cols=131 Identities=21% Similarity=0.306 Sum_probs=68.9
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCC--CCCccCCCCCccEEEecCCCCCCCCCcc-ccCCCCccch
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGP--IPASLGKLEKLQTLDLSNNKFTGEIPDS-LGDLGNLNYL 151 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L 151 (623)
.++.|+|++|++++.+|..++++++|++|+|++|++++. +|..+.++++|++|+|++|++++.+|.. +..+++|++|
T Consensus 354 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L 433 (562)
T 3a79_B 354 SFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVL 433 (562)
T ss_dssp CCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEE
T ss_pred CceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEE
Confidence 466666666666665666666666666666666666542 2344555666666666666666534432 4444444444
Q ss_pred hccccccCC---------------------CCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCCC
Q 006968 152 RLNNNSLTG---------------------SCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGP 205 (623)
Q Consensus 152 ~l~~N~l~~---------------------~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~ 205 (623)
+|++|++++ .+|..+..+++|+.|+|++|+|++..+..+. +.+++++|++.|.+
T Consensus 434 ~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 434 NLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp ECCSSCCCGGGGSSCCTTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred ECCCCCCCcchhhhhcCcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 444444443 4444444555555555555555532222111 33455555555543
No 330
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.48 E-value=1.2e-14 Score=159.32 Aligned_cols=136 Identities=25% Similarity=0.412 Sum_probs=104.0
Q ss_pred ccCCCCCCCCCCC-----Cccee-eeCCCCcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCc
Q 006968 51 VLENWDITSVDPC-----SWRMI-TCSPDGYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKL 124 (623)
Q Consensus 51 ~~~~w~~~~~~~c-----~w~gv-~c~~~~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 124 (623)
.+.+|.. +.+|| .|.|+ .|.. ++++.|+|++|+|++ +|..+ +++|++|+|++|+|+ .+| ..+++|
T Consensus 32 ~l~~W~~-~~~~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 32 AWDKWEK-QALPGENRNEAVSLLKECLI-NQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHHT-TCCTTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHHhc-cCCccccccchhhhcccccc-CCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCC
Confidence 4556753 46788 79999 7864 479999999999986 77766 378999999999998 677 457889
Q ss_pred cEEEecCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc--ccccccCCCCC
Q 006968 125 QTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA--RTFKVTGNPLI 202 (623)
Q Consensus 125 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~~~~~~n~~~ 202 (623)
++|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|.... +.+++++|.+.
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~N~L~ 173 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPTSLEVLSVRNNQLT 173 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCS
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCCCcCEEECCCCCCC
Confidence 999999999985 777 665 88888888888885 666 57888888888888886 554332 56777777765
Q ss_pred CC
Q 006968 203 CG 204 (623)
Q Consensus 203 ~~ 204 (623)
..
T Consensus 174 ~l 175 (571)
T 3cvr_A 174 FL 175 (571)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 331
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.48 E-value=7e-14 Score=144.66 Aligned_cols=131 Identities=19% Similarity=0.184 Sum_probs=104.2
Q ss_pred CCcceeeeCCCCcEEEEeCCCC-CcccccCccccCCCCcceEEeec-CCCCCCCCCccCCCCCccEEEecCCCCCCCCCc
Q 006968 63 CSWRMITCSPDGYVSALGLPSQ-SLSGTLSPWIGNLTKLQSVLLQN-NAILGPIPASLGKLEKLQTLDLSNNKFTGEIPD 140 (623)
Q Consensus 63 c~w~gv~c~~~~~v~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 140 (623)
|.|..|.|+ ++ +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|.
T Consensus 8 C~~~~v~~~-----------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCT-----------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECC-----------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcC-----------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 788777774 44 787 4888 99999999999996 999988788999999999999999999998888
Q ss_pred cccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCC-cc-----ccccccCCCCCCCCCC
Q 006968 141 SLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKI-SA-----RTFKVTGNPLICGPKA 207 (623)
Q Consensus 141 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~-----~~~~~~~n~~~~~~~~ 207 (623)
.|.+|++|+.|+|++|+|++..+..+..++ |+.|+|++|+|.....-. +. ....+..+.+.|..+.
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 999999999999999999965555566555 999999999998542210 11 2233445666676543
No 332
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.48 E-value=5.7e-14 Score=158.95 Aligned_cols=132 Identities=24% Similarity=0.292 Sum_probs=97.6
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCC--------CCccCCCCCccEEEecCCCCCCCCCc-cccCC
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPI--------PASLGKLEKLQTLDLSNNKFTGEIPD-SLGDL 145 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--------p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l 145 (623)
.++.|+|++|+|++..+..|.++++|++|+|++|++++.. +..|.++++|++|+|++|+|+ .+|. .|.++
T Consensus 481 ~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l 559 (680)
T 1ziw_A 481 NLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDL 559 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTC
T ss_pred CCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHcccc
Confidence 5777777777777666666777777777777777776431 123677778888888888888 4554 57888
Q ss_pred CCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc------ccccccCCCCCCCCCC
Q 006968 146 GNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA------RTFKVTGNPLICGPKA 207 (623)
Q Consensus 146 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~------~~~~~~~n~~~~~~~~ 207 (623)
++|+.|+|++|++++..+..|..+++|+.|+|++|+|++..|..+. +.+++++||+.|.|..
T Consensus 560 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 8888888888888865555677888888888888888877665332 5678899999998763
No 333
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.47 E-value=5.7e-14 Score=153.67 Aligned_cols=107 Identities=24% Similarity=0.300 Sum_probs=63.1
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCC--CCCCccCCCCCccEEEecCCCCCCCCCcc-ccCCCCccch
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILG--PIPASLGKLEKLQTLDLSNNKFTGEIPDS-LGDLGNLNYL 151 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L 151 (623)
.++.|+|++|++++.+|..++++++|++|+|++|++++ .+|..+.++++|++|+|++|++++.+|.. +..+++|++|
T Consensus 325 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L 404 (520)
T 2z7x_B 325 PFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSL 404 (520)
T ss_dssp CCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEE
T ss_pred cccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEE
Confidence 56666666666666666666666666666666666664 34455666666666666666666545543 5555555555
Q ss_pred hccccccCCCCCcccCCCCcccEEECCCCcCc
Q 006968 152 RLNNNSLTGSCPESLSKIESLTLVDLSYNNLS 183 (623)
Q Consensus 152 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 183 (623)
+|++|++++.+|..+. ++|+.|+|++|+|+
T Consensus 405 ~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 405 NMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp ECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred ECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 5555555544444433 45555555555555
No 334
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.47 E-value=6.1e-14 Score=145.98 Aligned_cols=132 Identities=24% Similarity=0.245 Sum_probs=114.9
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 64 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 143 (361)
T 2xot_A 64 TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYL 143 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEEC
Confidence 37999999999999888889999999999999999999877888999999999999999999888899999999999999
Q ss_pred cccccCCCCCcc-c---CCCCcccEEECCCCcCcCcCCCCcc-------ccccccCCCCCCCCC
Q 006968 154 NNNSLTGSCPES-L---SKIESLTLVDLSYNNLSGSLPKISA-------RTFKVTGNPLICGPK 206 (623)
Q Consensus 154 ~~N~l~~~~p~~-~---~~l~~L~~L~l~~N~l~~~~p~~~~-------~~~~~~~n~~~~~~~ 206 (623)
++|+|++ +|.. | ..+++|+.|+|++|+|++..+..+. +.+.+.+|++.|.|.
T Consensus 144 ~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 144 SQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CSSCCCS-CCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 9999995 5554 4 5799999999999999965443222 458899999999864
No 335
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.47 E-value=4.6e-14 Score=144.14 Aligned_cols=124 Identities=21% Similarity=0.170 Sum_probs=74.4
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCcccc-CCCCccchhc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLG-DLGNLNYLRL 153 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l 153 (623)
.++.|+|++|+|++..+.. +++|++|+|++|++++..|..+..+++|++|+|++|++++..|..+. .+++|++|+|
T Consensus 100 ~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 176 (317)
T 3o53_A 100 SIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (317)
T ss_dssp TCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred CcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEEC
Confidence 5666666666666544332 45666777777777665565666666777777777777655555553 5666777777
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLIC 203 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~ 203 (623)
++|.+++. | ....+++|+.|+|++|+|++.++.+.. +.+++++|.+..
T Consensus 177 ~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~ 228 (317)
T 3o53_A 177 QYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL 228 (317)
T ss_dssp TTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE
T ss_pred CCCcCccc-c-cccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccc
Confidence 77766633 2 233466666666666666654444221 455666666543
No 336
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.47 E-value=6.4e-14 Score=132.59 Aligned_cols=122 Identities=16% Similarity=0.245 Sum_probs=105.6
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
+++.|+|++|.++ .++.+.++++|++|+|++|++++..|..|..+++|++|+|++|++++..|..+..+++|++|+|+
T Consensus 67 ~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~ 144 (197)
T 4ezg_A 67 NIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLS 144 (197)
T ss_dssp TCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECC
T ss_pred CCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEcc
Confidence 7999999999776 34578999999999999999998888999999999999999999998889999999999999999
Q ss_pred ccc-cCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCC
Q 006968 155 NNS-LTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPL 201 (623)
Q Consensus 155 ~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~ 201 (623)
+|. ++ .+| .+..+++|+.|++++|++++. +.+.. +.+++++|++
T Consensus 145 ~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 145 YNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-RGIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp SCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-TTGGGCSSCCEEEECBC--
T ss_pred CCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-HHhccCCCCCEEEeeCccc
Confidence 998 65 666 799999999999999999963 33221 5677888875
No 337
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=1.4e-13 Score=127.51 Aligned_cols=103 Identities=29% Similarity=0.307 Sum_probs=90.6
Q ss_pred ceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCC
Q 006968 101 QSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYN 180 (623)
Q Consensus 101 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 180 (623)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999997 7888775 89999999999999888999999999999999999999765566799999999999999
Q ss_pred cCcCcCCCCcc-----ccccccCCCCCCCCC
Q 006968 181 NLSGSLPKISA-----RTFKVTGNPLICGPK 206 (623)
Q Consensus 181 ~l~~~~p~~~~-----~~~~~~~n~~~~~~~ 206 (623)
+|++.++..+. +.+++++|++.|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 99977766443 568899999988764
No 338
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.46 E-value=2.8e-14 Score=163.60 Aligned_cols=130 Identities=22% Similarity=0.295 Sum_probs=116.1
Q ss_pred CcEEEEeCCCCCccc-----------------ccCcccc--CCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCC-
Q 006968 74 GYVSALGLPSQSLSG-----------------TLSPWIG--NLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNK- 133 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~-----------------~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~- 133 (623)
.+++.|+|++|+|+| .+|..++ ++++|++|+|++|++.+.+|..|+++++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ 527 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCC
Confidence 479999999999998 4999988 99999999999999999999999999999999999998
Q ss_pred CCC-CCCccccCCC-------CccchhccccccCCCCCc--ccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCC
Q 006968 134 FTG-EIPDSLGDLG-------NLNYLRLNNNSLTGSCPE--SLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGN 199 (623)
Q Consensus 134 l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n 199 (623)
|+| .+|..+++++ +|++|+|++|+++ .+|. .|.++++|+.|+|++|+|+ .+|.+.. +.+++++|
T Consensus 528 lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~N 605 (876)
T 4ecn_A 528 ISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDYN 605 (876)
T ss_dssp SCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCSS
T ss_pred cccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcCC
Confidence 998 8998777666 9999999999999 8998 8999999999999999999 8884332 56888999
Q ss_pred CCCCCC
Q 006968 200 PLICGP 205 (623)
Q Consensus 200 ~~~~~~ 205 (623)
.+...+
T Consensus 606 ~l~~lp 611 (876)
T 4ecn_A 606 QIEEIP 611 (876)
T ss_dssp CCSCCC
T ss_pred ccccch
Confidence 876433
No 339
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.45 E-value=2.1e-13 Score=143.50 Aligned_cols=128 Identities=21% Similarity=0.188 Sum_probs=111.4
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCcc-ccCCCCccchh
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDS-LGDLGNLNYLR 152 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~ 152 (623)
.+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|.. |.++++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 37999999999999888889999999999999999999888888999999999999999999 56655 68999999999
Q ss_pred ccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc--ccccccCCCCC
Q 006968 153 LNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA--RTFKVTGNPLI 202 (623)
Q Consensus 153 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~~~~~~n~~~ 202 (623)
|++|++++..|..+..+++|+.|++++|++++.....+. +.+++++|.+.
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCS
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeeccccccc
Confidence 999999988888899999999999999999965333222 45667777653
No 340
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.45 E-value=4.9e-14 Score=129.69 Aligned_cols=107 Identities=27% Similarity=0.286 Sum_probs=97.3
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCC--ccccCCCCccchh
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIP--DSLGDLGNLNYLR 152 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~ 152 (623)
+++.|+|++|.|++. ..+.++++|++|+|++|++++.+|..+.++++|++|+|++|+|++ +| ..+..+++|++|+
T Consensus 50 ~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~L~ 126 (168)
T 2ell_A 50 NLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECLKSLD 126 (168)
T ss_dssp GCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCCCEEE
T ss_pred CCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCc-chhHHHHhcCCCCCEEE
Confidence 799999999999976 789999999999999999998888888889999999999999995 44 7899999999999
Q ss_pred ccccccCCCCC---cccCCCCcccEEECCCCcCcC
Q 006968 153 LNNNSLTGSCP---ESLSKIESLTLVDLSYNNLSG 184 (623)
Q Consensus 153 l~~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~ 184 (623)
|++|.+++..+ ..+..+++|+.|++++|.+..
T Consensus 127 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 127 LFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred eeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 99999995544 489999999999999999884
No 341
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.45 E-value=1.5e-14 Score=147.44 Aligned_cols=108 Identities=23% Similarity=0.312 Sum_probs=51.8
Q ss_pred EEEEeCCCCCc-ccccCcccc-------CCCCcceEEeecCCCCCCCCCcc--CCCCCccEEEecCCCCCCCCCccccCC
Q 006968 76 VSALGLPSQSL-SGTLSPWIG-------NLTKLQSVLLQNNAILGPIPASL--GKLEKLQTLDLSNNKFTGEIPDSLGDL 145 (623)
Q Consensus 76 v~~L~L~~n~l-~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l 145 (623)
++.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+ ..+++|++|+|++|++++. |..++.+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 44445555555 233343333 44555555555555554444443 4455555555555555533 4444444
Q ss_pred -----CCccchhccccccCCCCCcccCCCCcccEEECCCCcCcC
Q 006968 146 -----GNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSG 184 (623)
Q Consensus 146 -----~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 184 (623)
++|++|+|++|++++..|..|..+++|+.|+|++|+++|
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 187 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELG 187 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCc
Confidence 455555555555544444445555555555555555443
No 342
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.45 E-value=8.4e-14 Score=150.63 Aligned_cols=130 Identities=22% Similarity=0.193 Sum_probs=114.9
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+++.|+|++|.|++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|++|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 37999999999999988999999999999999999999766667899999999999999999888899999999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLIC 203 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~ 203 (623)
++|.+++..|..|..+++|+.|+|++|++++..+..+. +.+++.+|.+..
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~ 190 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA 190 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCE
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcE
Confidence 99999988888999999999999999999976554332 567788887643
No 343
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.44 E-value=1.9e-13 Score=140.28 Aligned_cols=128 Identities=25% Similarity=0.260 Sum_probs=91.2
Q ss_pred CcEEEEeCCCCCccc--ccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccch
Q 006968 74 GYVSALGLPSQSLSG--TLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYL 151 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 151 (623)
..++.|+|++|.++. ..+..+.++++|++|+|++|+++ .+|..+. ++|++|+|++|++++..|..+..+++|++|
T Consensus 145 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 221 (330)
T 1xku_A 145 NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKL 221 (330)
T ss_dssp TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEE
T ss_pred ccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 368888888888853 66777888888888888888877 4565543 677777777777776667777777777777
Q ss_pred hccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCCC
Q 006968 152 RLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGP 205 (623)
Q Consensus 152 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~ 205 (623)
+|++|.+++..+..+..+++|+.|+|++|+++ .+|..+. +.+++++|++...+
T Consensus 222 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~ 279 (330)
T 1xku_A 222 GLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIG 279 (330)
T ss_dssp ECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCC
T ss_pred ECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccC
Confidence 77777777666667777777777777777777 4444322 45667777765443
No 344
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.44 E-value=3.6e-14 Score=144.65 Aligned_cols=128 Identities=19% Similarity=0.195 Sum_probs=94.7
Q ss_pred cEEEEeCCCCCcccccCccc--cCCCCcceEEeecCCCCCCCCCccCCC-----CCccEEEecCCCCCCCCCccccCCCC
Q 006968 75 YVSALGLPSQSLSGTLSPWI--GNLTKLQSVLLQNNAILGPIPASLGKL-----EKLQTLDLSNNKFTGEIPDSLGDLGN 147 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~ 147 (623)
+++.|+|++|++++.+|..+ .++++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+.+++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 68888888888888888765 7888888888888888866 7777766 78888888888888766678888888
Q ss_pred ccchhccccccCCC--CCccc--CCCCcccEEECCCCcCcC--cCCCC------ccccccccCCCCCC
Q 006968 148 LNYLRLNNNSLTGS--CPESL--SKIESLTLVDLSYNNLSG--SLPKI------SARTFKVTGNPLIC 203 (623)
Q Consensus 148 L~~L~l~~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~~--~~p~~------~~~~~~~~~n~~~~ 203 (623)
|++|+|++|++.+. +|..+ ..+++|+.|+|++|+|++ .++.. .-+.+++++|.+..
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 242 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRD 242 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCS
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCc
Confidence 88888888887654 23344 777888888888888873 22211 11567777777654
No 345
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.43 E-value=1.1e-13 Score=140.86 Aligned_cols=110 Identities=20% Similarity=0.102 Sum_probs=51.6
Q ss_pred cEEEEeCCCCCcccccC----ccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCC--CC--ccccCCC
Q 006968 75 YVSALGLPSQSLSGTLS----PWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGE--IP--DSLGDLG 146 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p--~~~~~l~ 146 (623)
.++.|+|++|++++..+ ..+..+++|++|+|++|++++..|..|.++++|++|||++|++.+. ++ ..+..++
T Consensus 118 ~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~ 197 (310)
T 4glp_A 118 ALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFP 197 (310)
T ss_dssp CCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSC
T ss_pred CCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCC
Confidence 45555555555554333 2233455555555555555544445555555555555555554421 11 1123444
Q ss_pred CccchhccccccCCCCCc----ccCCCCcccEEECCCCcCcCc
Q 006968 147 NLNYLRLNNNSLTGSCPE----SLSKIESLTLVDLSYNNLSGS 185 (623)
Q Consensus 147 ~L~~L~l~~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~ 185 (623)
+|++|+|++|+++ .+|. .+..+++|+.|+|++|+|++.
T Consensus 198 ~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 239 (310)
T 4glp_A 198 AIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRAT 239 (310)
T ss_dssp CCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCC
T ss_pred CCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCcc
Confidence 5555555555554 2222 123444555555555555544
No 346
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.43 E-value=9.4e-14 Score=144.08 Aligned_cols=127 Identities=18% Similarity=0.196 Sum_probs=110.3
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCc--cccCCCCccch
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPD--SLGDLGNLNYL 151 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L 151 (623)
.+++.|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+++ .+|. .+..+++|++|
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEE
Confidence 47999999999999888889999999999999999999655555899999999999999999 5665 78999999999
Q ss_pred hccccc-cCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCC
Q 006968 152 RLNNNS-LTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPL 201 (623)
Q Consensus 152 ~l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~ 201 (623)
+|++|+ +++..|..+..+++|+.|++++|.+++..|..+. +.+++++|.+
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 999994 7766678899999999999999999988777654 4567777764
No 347
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.43 E-value=1.7e-13 Score=149.98 Aligned_cols=130 Identities=18% Similarity=0.261 Sum_probs=100.9
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCC--CCCccccCCCCccchh
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTG--EIPDSLGDLGNLNYLR 152 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ 152 (623)
.++.|++++|++.+.. .+..+++|++|+|++|++++.+|..+.++++|++|+|++|++++ .+|..+..+++|++|+
T Consensus 303 ~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~ 380 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380 (520)
T ss_dssp CCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEE
T ss_pred ceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEE
Confidence 5888888888876432 12578888888888888888788888888888888888888886 5667788888888888
Q ss_pred ccccccCCCCCcc-cCCCCcccEEECCCCcCcCcCCCCcc---ccccccCCCCCCCCC
Q 006968 153 LNNNSLTGSCPES-LSKIESLTLVDLSYNNLSGSLPKISA---RTFKVTGNPLICGPK 206 (623)
Q Consensus 153 l~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~~---~~~~~~~n~~~~~~~ 206 (623)
|++|++++.+|.. +..+++|+.|+|++|++++.+|.... +.+++++|.+...+.
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~~ip~ 438 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKSIPK 438 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCCCCCG
T ss_pred CCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEECCCCcccccch
Confidence 8888888756654 77788888888888888877766542 567788887765443
No 348
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.41 E-value=2e-13 Score=133.27 Aligned_cols=126 Identities=20% Similarity=0.202 Sum_probs=107.9
Q ss_pred CcEEEEeCCCCC-cccccCccccCCCCcceEEeec-CCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCcc--
Q 006968 74 GYVSALGLPSQS-LSGTLSPWIGNLTKLQSVLLQN-NAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLN-- 149 (623)
Q Consensus 74 ~~v~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-- 149 (623)
.+++.|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+|++|++++ +|. +..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 379999999997 8876667899999999999998 99997777889999999999999999995 887 88888888
Q ss_pred -chhcccc-ccCCCCCcccCCCCccc-EEECCCCcCcCcCCC-Ccc----ccccccCCC-CC
Q 006968 150 -YLRLNNN-SLTGSCPESLSKIESLT-LVDLSYNNLSGSLPK-ISA----RTFKVTGNP-LI 202 (623)
Q Consensus 150 -~L~l~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~-~~~----~~~~~~~n~-~~ 202 (623)
+|+|++| ++++..+..|..+++|+ .|++++|+++ .+|. .+. +.+++++|+ +.
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~ 193 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLT 193 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCC
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcc
Confidence 9999999 99966666799999999 9999999999 4444 332 567888885 54
No 349
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.40 E-value=4.3e-13 Score=148.22 Aligned_cols=130 Identities=19% Similarity=0.270 Sum_probs=111.5
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCC--CCCccccCCCCccchh
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTG--EIPDSLGDLGNLNYLR 152 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ 152 (623)
.++.|++++|++.... ....+++|++|+|++|++++.+|..+.++++|++|+|++|++++ .+|..+.++++|++|+
T Consensus 332 ~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~ 409 (562)
T 3a79_B 332 NIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLD 409 (562)
T ss_dssp CCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEE
T ss_pred cceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEE
Confidence 5999999999986432 12689999999999999999999999999999999999999995 3356799999999999
Q ss_pred ccccccCCCCCc-ccCCCCcccEEECCCCcCcCcCCCCcc---ccccccCCCCCCCCC
Q 006968 153 LNNNSLTGSCPE-SLSKIESLTLVDLSYNNLSGSLPKISA---RTFKVTGNPLICGPK 206 (623)
Q Consensus 153 l~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~~~---~~~~~~~n~~~~~~~ 206 (623)
|++|++++.+|. .+..+++|+.|+|++|++++.+|.... +.+++++|.+...+.
T Consensus 410 l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ip~ 467 (562)
T 3a79_B 410 VSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPK 467 (562)
T ss_dssp CTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCCCCCT
T ss_pred CCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhcCcCCEEECCCCcCcccCh
Confidence 999999985665 488899999999999999988776542 678899998875554
No 350
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.40 E-value=2.8e-13 Score=125.71 Aligned_cols=108 Identities=22% Similarity=0.243 Sum_probs=92.0
Q ss_pred cEEEEeCCCCCcccccCccccCCC-CcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLT-KLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.++.|+|++|+++. ++. +..+. +|++|+|++|+|++. ..|.++++|++|+|++|+|++..|..+..+++|++|+|
T Consensus 20 ~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 95 (176)
T 1a9n_A 20 RDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 95 (176)
T ss_dssp SCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEEC
Confidence 79999999999994 554 55555 999999999999965 67999999999999999999543344589999999999
Q ss_pred cccccCCCCCc--ccCCCCcccEEECCCCcCcCcCCC
Q 006968 154 NNNSLTGSCPE--SLSKIESLTLVDLSYNNLSGSLPK 188 (623)
Q Consensus 154 ~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~ 188 (623)
++|+|+ .+|. .+..+++|+.|++++|+++. +|.
T Consensus 96 ~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~ 130 (176)
T 1a9n_A 96 TNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKH 130 (176)
T ss_dssp CSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STT
T ss_pred CCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHh
Confidence 999997 6776 88999999999999999984 444
No 351
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.40 E-value=1.3e-13 Score=149.23 Aligned_cols=128 Identities=23% Similarity=0.259 Sum_probs=83.0
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCC----------------ccCCCCCccEEEecCCCCCCCC
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPA----------------SLGKLEKLQTLDLSNNKFTGEI 138 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~----------------~~~~l~~L~~L~Ls~N~l~~~~ 138 (623)
.++.|+|++|.|++..| ++++++|++|+|++|.|++..+. ....+++|+.|+|++|+|++..
T Consensus 59 ~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~ 136 (487)
T 3oja_A 59 KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLR 136 (487)
T ss_dssp TCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCSGG
T ss_pred CCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCCCC
Confidence 57777777777776554 66666666666666666532110 0112455666777777777666
Q ss_pred CccccCCCCccchhccccccCCCCCcccC-CCCcccEEECCCCcCcCcCCCCcc---ccccccCCCCCCC
Q 006968 139 PDSLGDLGNLNYLRLNNNSLTGSCPESLS-KIESLTLVDLSYNNLSGSLPKISA---RTFKVTGNPLICG 204 (623)
Q Consensus 139 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~---~~~~~~~n~~~~~ 204 (623)
|..++.+++|+.|+|++|.+++.+|..+. .+++|+.|+|++|.|++..+.... +.+++++|.+...
T Consensus 137 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~ 206 (487)
T 3oja_A 137 DLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFM 206 (487)
T ss_dssp GBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEE
T ss_pred chhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCCCCCCCC
Confidence 77777777777777777777776666665 677777777777777765433222 5567777776543
No 352
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.40 E-value=8.9e-13 Score=135.45 Aligned_cols=125 Identities=22% Similarity=0.275 Sum_probs=63.1
Q ss_pred EEEEeCCCCCcccccCccccCCCCcceEEeecCCCC--CCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 76 VSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAIL--GPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 76 v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
++.|+|++|++++..+..|.++++|+.|+|++|.++ +..|..+..+ +|++|+|++|+++ .+|..+. ++|++|+|
T Consensus 125 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l 200 (332)
T 2ft3_A 125 LVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT-GIPKDLP--ETLNELHL 200 (332)
T ss_dssp CCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-SCCSSSC--SSCSCCBC
T ss_pred CCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC-ccCcccc--CCCCEEEC
Confidence 444444444444333334555555555555555553 2344444444 3333333333333 2332222 45666666
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICG 204 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~ 204 (623)
++|.+++..|..+..+++|+.|+|++|++++..|..+. +.+++++|.+...
T Consensus 201 ~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 256 (332)
T 2ft3_A 201 DHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRV 256 (332)
T ss_dssp CSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBC
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeec
Confidence 66666655555666666666666666666655543322 3455666655433
No 353
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.40 E-value=2.4e-13 Score=154.16 Aligned_cols=169 Identities=24% Similarity=0.226 Sum_probs=107.1
Q ss_pred CchHHHHHHHHHHhCCC-CCcccCCCCCCCCCCCCcceeeeCCC-----------------CcEEEEeCCCCCccc----
Q 006968 31 INYEVVALVAVKNNLHD-PYNVLENWDITSVDPCSWRMITCSPD-----------------GYVSALGLPSQSLSG---- 88 (623)
Q Consensus 31 ~~~~~~~l~~~k~~~~~-p~~~~~~w~~~~~~~c~w~gv~c~~~-----------------~~v~~L~L~~n~l~~---- 88 (623)
...+..+|+++...... ....-.+|..+...++.|.+++++.. ..+..++|+.|.|.+
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~ 209 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDI 209 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCcccc
Confidence 34466788888876632 22233457555556678888777542 123344445555443
Q ss_pred -----ccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhccccccCCCCC
Q 006968 89 -----TLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCP 163 (623)
Q Consensus 89 -----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 163 (623)
..+..+..++.|+.|+|++|.+. .+|..+.++++|++|+|++|+|+ .+|..|++|++|++|+|++|+|+ .+|
T Consensus 210 ~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp 286 (727)
T 4b8c_D 210 ENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLP 286 (727)
T ss_dssp ------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCC
T ss_pred ccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccC
Confidence 33667889999999999999999 78888889999999999999999 99999999999999999999999 889
Q ss_pred cccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCC
Q 006968 164 ESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLIC 203 (623)
Q Consensus 164 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~ 203 (623)
..|..|++|++|+|++|.|+ .+|..+. +.+++++|++..
T Consensus 287 ~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~ 330 (727)
T 4b8c_D 287 AELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEK 330 (727)
T ss_dssp SSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCS
T ss_pred hhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCC
Confidence 99999999999999999998 6666443 678899999854
No 354
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.39 E-value=2.1e-13 Score=150.23 Aligned_cols=127 Identities=17% Similarity=0.191 Sum_probs=109.9
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCC-CCCccccCCCCccchh
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTG-EIPDSLGDLGNLNYLR 152 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ 152 (623)
.+++.|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++ .+|..++++++|++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 379999999999999888999999999999999999998777779999999999999999996 4678899999999999
Q ss_pred ccccccCCCCC-cccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCC
Q 006968 153 LNNNSLTGSCP-ESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNP 200 (623)
Q Consensus 153 l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~ 200 (623)
|++|.+.+.+| ..+..+++|+.|++++|++++.+|..+. +.+++.+|.
T Consensus 130 L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 183 (549)
T 2z81_A 130 IGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSE 183 (549)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSB
T ss_pred CCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCc
Confidence 99999555665 6899999999999999999998877554 344555554
No 355
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.38 E-value=6.1e-13 Score=131.89 Aligned_cols=120 Identities=24% Similarity=0.332 Sum_probs=83.4
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
+++.|+|++|+|++..+ +.++++|++|+|++|++++ +|. +.. ++|+.|+|++|++++ +| .+..+++|+.|+|+
T Consensus 64 ~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls 136 (263)
T 1xeu_A 64 NLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIR 136 (263)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECT
T ss_pred CCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEECC
Confidence 67778888888775443 7777888888888888774 443 223 778888888888774 43 57778888888888
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICG 204 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~ 204 (623)
+|++++ +| .+..+++|+.|+|++|++++. +.+.. +.+++++|++.+.
T Consensus 137 ~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 137 NNKLKS-IV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCcCCC-Ch-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 888874 33 577778888888888888765 32221 4566777776554
No 356
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.38 E-value=1.8e-13 Score=139.32 Aligned_cols=130 Identities=15% Similarity=0.149 Sum_probs=99.6
Q ss_pred cEEEEeCCCCCcccccCccc--cCCCCcceEEeecCCCCCCCC----CccCCCCCccEEEecCCCCCCCCCccccCCCCc
Q 006968 75 YVSALGLPSQSLSGTLSPWI--GNLTKLQSVLLQNNAILGPIP----ASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNL 148 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 148 (623)
+++.|+|++|++++..|..+ .++++|++|+|++|++++..| ..+..+++|++|+|++|++++..|..++.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 48889999999988888887 888899999999999887655 344578889999999999987777888888999
Q ss_pred cchhccccccCCC--C--CcccCCCCcccEEECCCCcCcCcCCC---C-----ccccccccCCCCCCC
Q 006968 149 NYLRLNNNSLTGS--C--PESLSKIESLTLVDLSYNNLSGSLPK---I-----SARTFKVTGNPLICG 204 (623)
Q Consensus 149 ~~L~l~~N~l~~~--~--p~~~~~l~~L~~L~l~~N~l~~~~p~---~-----~~~~~~~~~n~~~~~ 204 (623)
++|+|++|++.+. + +..+..+++|+.|+|++|+++...+. . .-+.+++++|.+...
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 239 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRAT 239 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCcc
Confidence 9999999987642 2 23346788899999999988732111 1 116678888887554
No 357
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.37 E-value=1.1e-13 Score=124.46 Aligned_cols=104 Identities=25% Similarity=0.249 Sum_probs=93.3
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCC-CCccccCCCCccchh
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGE-IPDSLGDLGNLNYLR 152 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~ 152 (623)
.+++.|+|++|+|++. ..++++++|++|+|++|++++.+|..+.++++|++|+|++|++++. .|..+..+++|++|+
T Consensus 42 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~ 119 (149)
T 2je0_A 42 EELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLD 119 (149)
T ss_dssp TTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEE
T ss_pred CCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEe
Confidence 3799999999999976 7899999999999999999987898888899999999999999953 348899999999999
Q ss_pred ccccccCCCCC---cccCCCCcccEEECCC
Q 006968 153 LNNNSLTGSCP---ESLSKIESLTLVDLSY 179 (623)
Q Consensus 153 l~~N~l~~~~p---~~~~~l~~L~~L~l~~ 179 (623)
|++|.+++..+ ..+..+++|+.|++++
T Consensus 120 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 120 LFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999996554 4789999999999874
No 358
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.36 E-value=1.6e-13 Score=127.25 Aligned_cols=105 Identities=24% Similarity=0.306 Sum_probs=94.9
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCc--cccCCCCccchh
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPD--SLGDLGNLNYLR 152 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~ 152 (623)
+++.|+|++|+|++. +.+.++++|++|+|++|+|++..|..+..+++|++|+|++|+|+ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 799999999999975 68999999999999999999654455689999999999999997 7887 899999999999
Q ss_pred ccccccCCCCCcc----cCCCCcccEEECCCCcCc
Q 006968 153 LNNNSLTGSCPES----LSKIESLTLVDLSYNNLS 183 (623)
Q Consensus 153 l~~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~ 183 (623)
|++|.++ .+|.. +..+++|+.||+++|.+.
T Consensus 120 l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999998 67775 899999999999999876
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.36 E-value=1.4e-12 Score=131.42 Aligned_cols=120 Identities=28% Similarity=0.417 Sum_probs=93.8
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
+++.|+|++|++++..+ +.++++|++|+|++|++++ +| .+..+++|++|+|++|++++ + +.+..+++|+.|+|+
T Consensus 69 ~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~ 142 (291)
T 1h6t_A 69 NVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLG 142 (291)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECC
T ss_pred CCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEcc
Confidence 68888999998886544 8888889999999888885 44 48888888899999888884 4 467888888888888
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLIC 203 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~ 203 (623)
+|++++. ..+..+++|+.|+|++|++++..| +.. +.+++++|.+..
T Consensus 143 ~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 143 NNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp SSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB
T ss_pred CCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCCC
Confidence 8888854 578888888888888888887654 221 557777877643
No 360
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=8.3e-13 Score=136.54 Aligned_cols=104 Identities=23% Similarity=0.313 Sum_probs=93.1
Q ss_pred ceEEeecC-CCCCCCCCccCCCCCccEEEecC-CCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECC
Q 006968 101 QSVLLQNN-AILGPIPASLGKLEKLQTLDLSN-NKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLS 178 (623)
Q Consensus 101 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 178 (623)
..+++++| +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45789998 898 5888 99999999999996 99997777889999999999999999999888899999999999999
Q ss_pred CCcCcCcCCCCcc----ccccccCCCCCCCCC
Q 006968 179 YNNLSGSLPKISA----RTFKVTGNPLICGPK 206 (623)
Q Consensus 179 ~N~l~~~~p~~~~----~~~~~~~n~~~~~~~ 206 (623)
+|+|++.++..+. +.+.+.+|++.|.|.
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCCCc
Confidence 9999987776553 568899999999875
No 361
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.34 E-value=2.5e-12 Score=127.52 Aligned_cols=120 Identities=23% Similarity=0.328 Sum_probs=101.6
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
+++.|+|++|+|+ .++ .+..+++|++|+|++|+|++..| +.++++|++|+|++|+++ .+|.... ++|+.|+|+
T Consensus 42 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~-~l~~~~~--~~L~~L~L~ 114 (263)
T 1xeu_A 42 GVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLK-NLNGIPS--ACLSRLFLD 114 (263)
T ss_dssp TCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCS-CCTTCCC--SSCCEEECC
T ss_pred cCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccC-CcCcccc--CcccEEEcc
Confidence 7999999999998 456 78999999999999999996544 999999999999999999 4665433 999999999
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICG 204 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~ 204 (623)
+|++++ ++ .+..+++|+.|+|++|+|++. |.+.. +.+++++|++...
T Consensus 115 ~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 115 NNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp SSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCEEECTTSCCCBC
T ss_pred CCccCC-Ch-hhcCcccccEEECCCCcCCCC-hHHccCCCCCEEECCCCcCcch
Confidence 999995 44 699999999999999999975 43322 6688999987554
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.33 E-value=1.4e-12 Score=131.26 Aligned_cols=122 Identities=29% Similarity=0.375 Sum_probs=104.1
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+++.|+|++|.+++ ++ .+.++++|++|+|++|++++. ..+..+++|+.|+|++|++++ + ..+..+++|++|+|
T Consensus 90 ~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 90 KNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSL 163 (291)
T ss_dssp TTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCc-c-hhhccCCCCCEEEc
Confidence 479999999999986 44 499999999999999999963 468999999999999999995 4 68999999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICG 204 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~ 204 (623)
++|++++..| +..+++|+.|+|++|.|++ +|.+.. +.+++++|++.+.
T Consensus 164 ~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 164 EDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEEEEEEEEECC
T ss_pred cCCccccchh--hcCCCccCEEECCCCcCCC-ChhhccCCCCCEEECcCCcccCC
Confidence 9999996544 9999999999999999996 344322 5678888887553
No 363
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.32 E-value=1.4e-12 Score=132.57 Aligned_cols=123 Identities=25% Similarity=0.367 Sum_probs=100.2
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+++.|+|++|.|++. + .+.++++|++|+|++|++++ +|. +..+++|++|+|++|++++ ++. +..+++|++|+|
T Consensus 85 ~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 158 (308)
T 1h6u_A 85 TKITELELSGNPLKNV-S-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSI 158 (308)
T ss_dssp CSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEc
Confidence 4799999999999863 3 68899999999999999986 443 8899999999999999995 444 888999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICGP 205 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~~ 205 (623)
++|++++ ++. +..+++|+.|+|++|++++..+ +.. +.+++++|++...+
T Consensus 159 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~~ 211 (308)
T 1h6u_A 159 GNAQVSD-LTP-LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVS 211 (308)
T ss_dssp CSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCG
T ss_pred cCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCccc
Confidence 9999985 444 8899999999999999986544 221 56788888875544
No 364
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.31 E-value=3.5e-12 Score=129.55 Aligned_cols=121 Identities=25% Similarity=0.410 Sum_probs=96.5
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
+++.|+|++|++++..+ +.++++|++|+|++|++++ +| .+..+++|++|+|++|++++ +|. +..+++|++|+|+
T Consensus 64 ~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~ 137 (308)
T 1h6u_A 64 NLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLD 137 (308)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECC
T ss_pred CCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECC
Confidence 78999999999986444 8889999999999999885 44 68889999999999999984 554 8889999999999
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICG 204 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~ 204 (623)
+|++++..+ +..+++|+.|+|++|++++..+ +.. +.+++++|.+...
T Consensus 138 ~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~ 188 (308)
T 1h6u_A 138 LNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKISDI 188 (308)
T ss_dssp SSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC
T ss_pred CCccCcCcc--ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccCcC
Confidence 999985433 8888999999999999986443 221 5677888876443
No 365
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.31 E-value=2.3e-12 Score=133.40 Aligned_cols=141 Identities=18% Similarity=0.171 Sum_probs=101.3
Q ss_pred CCcceeeeCCC----------CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCC-CccCCCCCccE-EEec
Q 006968 63 CSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIP-ASLGKLEKLQT-LDLS 130 (623)
Q Consensus 63 c~w~gv~c~~~----------~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~Ls 130 (623)
|+|..|.|+.. ..++.|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|.. ++++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 78889999642 368888999998885555678888899999999988876665 46778887664 6677
Q ss_pred CCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCC-CcCcCcCCCCcc------ccccccCCCCCC
Q 006968 131 NNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSY-NNLSGSLPKISA------RTFKVTGNPLIC 203 (623)
Q Consensus 131 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~------~~~~~~~n~~~~ 203 (623)
+|+|+...|..|..+++|++|++++|++++..+..+....++..|++.+ |++....+..+. ..+.+++|.+..
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 7888866677888888899999998888866555666666777777755 455533333222 335667776643
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.30 E-value=4.7e-12 Score=140.14 Aligned_cols=120 Identities=29% Similarity=0.415 Sum_probs=94.4
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
+++.|+|++|+|++..+ +.++++|+.|+|++|+|++ +| .+..+++|+.|+|++|+|++ + +.+..|++|+.|+|+
T Consensus 66 ~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls 139 (605)
T 1m9s_A 66 NVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLG 139 (605)
T ss_dssp TCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECC
T ss_pred CCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECC
Confidence 78889999999886554 8888899999999998885 44 68888888888888888884 4 458888888888888
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLIC 203 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~ 203 (623)
+|+|++. ..+..|++|+.|+|++|.|++.+| +.. +.+++++|.+..
T Consensus 140 ~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 140 NNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp SSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB
T ss_pred CCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCC
Confidence 8888854 578888888888888888887665 221 557778887644
No 367
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.30 E-value=6.5e-15 Score=139.62 Aligned_cols=109 Identities=22% Similarity=0.273 Sum_probs=63.8
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.|+|++|+|++ +| .+.++++|++|+|++|+++ .+|..+..+++|++|+|++|++++ +| .+..+++|++|+|+
T Consensus 49 ~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~ 123 (198)
T 1ds9_A 49 ACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMS 123 (198)
T ss_dssp TCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEES
T ss_pred CCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECC
Confidence 46666666666664 44 5566666666666666666 455555555666666666666663 44 45566666666666
Q ss_pred ccccCCCCC-cccCCCCcccEEECCCCcCcCcCCC
Q 006968 155 NNSLTGSCP-ESLSKIESLTLVDLSYNNLSGSLPK 188 (623)
Q Consensus 155 ~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~ 188 (623)
+|++++..+ ..+..+++|+.|++++|++++.+|.
T Consensus 124 ~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 124 NNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp EEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 666653211 2455666666666666666655443
No 368
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.30 E-value=2e-12 Score=131.88 Aligned_cols=120 Identities=20% Similarity=0.197 Sum_probs=60.6
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.|+|++|+|++.. ..++|++|+|++|++++..+.. +++|++|+|++|++++..|..+..+++|++|+|+
T Consensus 81 ~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 152 (317)
T 3o53_A 81 TLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLK 152 (317)
T ss_dssp TCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECT
T ss_pred CCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECC
Confidence 4555555555555322 2255555555555555433322 3455555555555554444455555555555555
Q ss_pred ccccCCCCCcccC-CCCcccEEECCCCcCcCcCCCCcc---ccccccCCCCC
Q 006968 155 NNSLTGSCPESLS-KIESLTLVDLSYNNLSGSLPKISA---RTFKVTGNPLI 202 (623)
Q Consensus 155 ~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~---~~~~~~~n~~~ 202 (623)
+|.+++..|..+. .+++|+.|+|++|.|++..+.... +.+++++|.+.
T Consensus 153 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~ 204 (317)
T 3o53_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLA 204 (317)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCC
T ss_pred CCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCC
Confidence 5555544444442 455555555555555543221111 34455555543
No 369
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.29 E-value=3.2e-12 Score=132.04 Aligned_cols=122 Identities=20% Similarity=0.309 Sum_probs=77.9
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.|++++|.+++..+ +..+++|++|+|++|++++. |. +..+++|++|+|++|++++ + +.+..+++|++|+|+
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~ 273 (347)
T 4fmz_A 200 SLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVG 273 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECC
T ss_pred ccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEcc
Confidence 56677777777765433 66677777777777777643 32 6667777777777777763 3 356667777777777
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc-----ccccccCCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICG 204 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~ 204 (623)
+|++++ + +.+..+++|+.|++++|++++..|..+. +.+++++|++...
T Consensus 274 ~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 274 SNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp SSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred CCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 777764 3 3466667777777777777665554322 4566667765443
No 370
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.29 E-value=1e-11 Score=136.09 Aligned_cols=114 Identities=28% Similarity=0.402 Sum_probs=85.2
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
+++.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|+
T Consensus 81 ~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 148 (571)
T 3cvr_A 81 QITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINAD 148 (571)
T ss_dssp TCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred CCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCC
Confidence 6888888888888 566 457888888888888886 776 655 88888888888885 766 57788888888
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc--ccccccCCCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA--RTFKVTGNPLICGP 205 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~~~~~~n~~~~~~ 205 (623)
+|+|++ +|. .+++|+.|+|++|+|++ +|.+.. +.+++++|.+...+
T Consensus 149 ~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~l~~~L~~L~Ls~N~L~~lp 196 (571)
T 3cvr_A 149 NNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPELPESLEALDVSTNLLESLP 196 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSSCC
T ss_pred CCccCc-CCC---cCCCcCEEECCCCCCCC-cchhhCCCCEEECcCCCCCchh
Confidence 888884 665 56788888888888886 555321 45677777766443
No 371
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.28 E-value=4.3e-12 Score=140.40 Aligned_cols=123 Identities=29% Similarity=0.396 Sum_probs=104.8
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+++.|+|++|.|++ ++ .+.++++|+.|+|++|+|++ + ..+..|++|+.|+|++|+|++ + ..+..|++|+.|+|
T Consensus 87 ~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 87 KNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSL 160 (605)
T ss_dssp TTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCC-C-GGGGSCTTCSEEEC
T ss_pred CCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCC-c-hhhcccCCCCEEEC
Confidence 479999999999986 34 78999999999999999995 4 468999999999999999995 4 78999999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICGP 205 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~~ 205 (623)
++|+|++..| +..+++|+.|+|++|+|++. |.+.. +.+++++|++...+
T Consensus 161 s~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 161 EDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEECCC
T ss_pred cCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcCCc
Confidence 9999997665 99999999999999999964 44322 56788888875543
No 372
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.26 E-value=2.5e-12 Score=142.57 Aligned_cols=137 Identities=23% Similarity=0.311 Sum_probs=96.1
Q ss_pred cccCCCCCCCCCCCCcceeeeCC-------CCcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCC
Q 006968 50 NVLENWDITSVDPCSWRMITCSP-------DGYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLE 122 (623)
Q Consensus 50 ~~~~~w~~~~~~~c~w~gv~c~~-------~~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 122 (623)
...+.|. .+.+||.|+|..|.. ...++.|++++|+|+ .+|..+. ++|++|+|++|+|+ .+|. .++
T Consensus 10 ~~w~~W~-~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~ 81 (622)
T 3g06_A 10 AVWSAWR-RAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPP 81 (622)
T ss_dssp CHHHHHH-HTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCT
T ss_pred HHHHHHH-hcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCC
Confidence 3455675 345788887643321 125888889998888 7777665 78888888888888 5665 567
Q ss_pred CccEEEecCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc--ccccccCCC
Q 006968 123 KLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA--RTFKVTGNP 200 (623)
Q Consensus 123 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~~~~~~n~ 200 (623)
+|++|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|+.|++++|+|++ +|.... +.+++++|.
T Consensus 82 ~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 82 ELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVLPPGLQELSVSDNQ 152 (622)
T ss_dssp TCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSC
T ss_pred CCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCCCCCCCEEECcCCc
Confidence 8888888888888 5776 66788888888888884 554 45677777777777775 333322 556677776
Q ss_pred CCC
Q 006968 201 LIC 203 (623)
Q Consensus 201 ~~~ 203 (623)
+..
T Consensus 153 l~~ 155 (622)
T 3g06_A 153 LAS 155 (622)
T ss_dssp CSC
T ss_pred CCC
Confidence 544
No 373
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.26 E-value=2.1e-11 Score=120.61 Aligned_cols=147 Identities=13% Similarity=0.061 Sum_probs=113.8
Q ss_pred HHHHhcCCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcC-CCceeeeeeeeecCCceE
Q 006968 296 LRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-HRNLLRLCGFCSTENERL 374 (623)
Q Consensus 296 l~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~ 374 (623)
+......|.....++.|+++.||++.. +++.+++|+...... .....+.+|+++++.+. |..+.++++++...+..+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 444556788888888889999999976 468899999865321 22346889999999885 667788999998888999
Q ss_pred EEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---------------------------------
Q 006968 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ--------------------------------- 421 (623)
Q Consensus 375 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~--------------------------------- 421 (623)
+||||++|.+|.+.+.. ......++.+++++|+.||+.
T Consensus 87 lv~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN 157 (263)
T ss_dssp EEEECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGG
T ss_pred EEEEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccc
Confidence 99999999998765321 112346788999999999981
Q ss_pred -----------------------CCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 422 -----------------------CDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 422 -----------------------~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
..+.++|||+++.||+++++..+.|+||+.+.
T Consensus 158 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 158 WEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01468999999999999876556799999875
No 374
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.26 E-value=7.3e-12 Score=137.71 Aligned_cols=103 Identities=22% Similarity=0.298 Sum_probs=91.5
Q ss_pred CcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEECC
Q 006968 99 KLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLS 178 (623)
Q Consensus 99 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 178 (623)
.|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .+..+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 46789999999995 786 999999999999999999 999999999999999999999995 77 89999999999999
Q ss_pred CCcCcCcC-CCCcc-----ccccccCCCCCCCCC
Q 006968 179 YNNLSGSL-PKISA-----RTFKVTGNPLICGPK 206 (623)
Q Consensus 179 ~N~l~~~~-p~~~~-----~~~~~~~n~~~~~~~ 206 (623)
+|+|++.+ |..+. +.+++++|++...++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 99999886 76544 568899998755443
No 375
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.24 E-value=8.6e-12 Score=134.38 Aligned_cols=103 Identities=29% Similarity=0.433 Sum_probs=63.2
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
+++.|+|++|.+++..+ +.++++|++|+|++|++++..| +..+++|+.|+|++|++++..| +..+++|+.|+|+
T Consensus 244 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~ 317 (466)
T 1o6v_A 244 NLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 317 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECC
T ss_pred CCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECc
Confidence 56777777777765443 6666667777777776664332 6666666666666666664322 5566666666666
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCc
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGS 185 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 185 (623)
+|++++..| +..+++|+.|++++|++++.
T Consensus 318 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 318 FNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp SSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred CCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 666665443 55556666666666666543
No 376
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.23 E-value=8.1e-14 Score=132.01 Aligned_cols=126 Identities=24% Similarity=0.315 Sum_probs=108.1
Q ss_pred cEEEEeCCCCCcccccCc------cccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCc
Q 006968 75 YVSALGLPSQSLSGTLSP------WIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNL 148 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 148 (623)
.++.++|+.+.++|.+|. .+.++++|++|+|++|++++ +| .+.++++|++|+|++|+|+ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 677788888888888776 89999999999999999996 77 8999999999999999999 899988889999
Q ss_pred cchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCC--CC---c-cccccccCCCCCCCC
Q 006968 149 NYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLP--KI---S-ARTFKVTGNPLICGP 205 (623)
Q Consensus 149 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~---~-~~~~~~~~n~~~~~~ 205 (623)
++|+|++|++++ +| .+..+++|+.|+|++|++++..+ .+ . -+.+++++|++.+.+
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccc
Confidence 999999999995 55 68899999999999999995322 11 1 167889999886653
No 377
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.20 E-value=7.1e-11 Score=126.56 Aligned_cols=116 Identities=26% Similarity=0.332 Sum_probs=65.0
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.|+|++|++++ +| .++++++|++|+|++|++++ +|..+ .+|++|+|++|++++ +| .++++++|++|+++
T Consensus 132 ~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 132 LLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 45666666666654 44 36666666666666666663 44432 356666666666663 44 46666666666666
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLIC 203 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~ 203 (623)
+|++++ +|... ++|+.|++++|.++ .+|.+.. +.+++++|.+..
T Consensus 204 ~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 204 NNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp SSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSS
T ss_pred CCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCc
Confidence 666663 33322 35555566666555 4444221 446666776543
No 378
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.19 E-value=5.9e-11 Score=127.26 Aligned_cols=99 Identities=26% Similarity=0.347 Sum_probs=60.3
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
+++.|+|++|+|++. | .++++++|++|+|++|++++ +| ++.+++|++|+|++|+|++ +| ++++++|++|+|+
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECC
Confidence 566666666666643 3 46666666666666666664 23 5666666666666666664 33 5666666666666
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSG 184 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 184 (623)
+|++++ +| +..+++|+.|++++|+|++
T Consensus 115 ~N~l~~-l~--~~~l~~L~~L~l~~N~l~~ 141 (457)
T 3bz5_A 115 TNKLTK-LD--VSQNPLLTYLNCARNTLTE 141 (457)
T ss_dssp SSCCSC-CC--CTTCTTCCEEECTTSCCSC
T ss_pred CCcCCe-ec--CCCCCcCCEEECCCCccce
Confidence 666664 33 5666666666666666665
No 379
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.19 E-value=2.9e-11 Score=130.23 Aligned_cols=123 Identities=31% Similarity=0.398 Sum_probs=99.6
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
..++.|+|++|++++. +.+..+++|+.|+|++|++++..| +..+++|+.|+|++|++++ +|. +..+++|+.|+|
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L 294 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN-ISP-LAGLTALTNLEL 294 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCC-CGG-GTTCTTCSEEEC
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCc-ccc-ccCCCccCeEEc
Confidence 3689999999999863 468889999999999999986654 8889999999999999995 444 888999999999
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc---ccccccCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA---RTFKVTGNPLICG 204 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~---~~~~~~~n~~~~~ 204 (623)
++|++++..| +..+++|+.|+|++|++++..|-... +.+++++|++...
T Consensus 295 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 295 NENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred CCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc
Confidence 9999986544 88899999999999999987662111 5677888877544
No 380
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.19 E-value=2.4e-11 Score=125.35 Aligned_cols=119 Identities=20% Similarity=0.376 Sum_probs=85.1
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.|+|++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|++|+|++|++++ +|. +..+++|++|+|+
T Consensus 178 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~ 251 (347)
T 4fmz_A 178 DLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIG 251 (347)
T ss_dssp TCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECC
T ss_pred CCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECC
Confidence 67788888888775333 7778888888888888875433 7777888888888888874 444 7778888888888
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLI 202 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~ 202 (623)
+|.+++ + +.+..+++|+.|++++|++++. |.... +.+++++|++.
T Consensus 252 ~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 252 TNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp SSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCC
T ss_pred CCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCC
Confidence 888874 3 4577788888888888888753 33221 55677777664
No 381
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.17 E-value=1e-10 Score=125.39 Aligned_cols=96 Identities=26% Similarity=0.389 Sum_probs=59.5
Q ss_pred CCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCcccEEEC
Q 006968 98 TKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDL 177 (623)
Q Consensus 98 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 177 (623)
++|++|+|++|++++ +| .|+++++|++|+|++|++++ +|..+ ++|++|+|++|++++ +| .+..+++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 456666666666664 55 46666667777777776663 55433 366666777776664 45 4667777777777
Q ss_pred CCCcCcCcCCCCcc--ccccccCCCCC
Q 006968 178 SYNNLSGSLPKISA--RTFKVTGNPLI 202 (623)
Q Consensus 178 ~~N~l~~~~p~~~~--~~~~~~~n~~~ 202 (623)
++|++++ +|.... +.+++++|.+.
T Consensus 203 ~~N~l~~-l~~~~~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 203 DNNSLKK-LPDLPLSLESIVAGNNILE 228 (454)
T ss_dssp CSSCCSS-CCCCCTTCCEEECCSSCCS
T ss_pred CCCcCCc-CCCCcCcccEEECcCCcCC
Confidence 7777765 333322 45666666654
No 382
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.16 E-value=1.2e-10 Score=124.81 Aligned_cols=118 Identities=25% Similarity=0.287 Sum_probs=92.4
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhc
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.+++.|+|++|+|++. + ++++++|++|+|++|+..+.+ .+..+++|++|+|++|++++ +| +..+++|+.|++
T Consensus 127 ~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l 198 (457)
T 3bz5_A 127 PLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNC 198 (457)
T ss_dssp TTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEEC
T ss_pred CcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEEC
Confidence 4789999999999873 3 788888999999988766666 37888888888998888885 65 788888888888
Q ss_pred cccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCCCCC
Q 006968 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICG 204 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~ 204 (623)
++|++++. .+..+++|+.|++++|+|++ +| ... +.+++++|++...
T Consensus 199 ~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip-~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 199 DTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID-VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC-CTTCTTCSEEECCSSCCSCC
T ss_pred cCCcCCee---ccccCCCCCEEECcCCcccc-cC-ccccCCCCEEEeeCCcCCCc
Confidence 88888854 37888888888888888887 45 211 5677888876543
No 383
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.16 E-value=5.4e-11 Score=117.28 Aligned_cols=137 Identities=14% Similarity=0.073 Sum_probs=100.4
Q ss_pred CCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCce--eeeeeeeecCCceEEEEec
Q 006968 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL--LRLCGFCSTENERLLVYPY 379 (623)
Q Consensus 302 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~ni--v~l~~~~~~~~~~~lv~e~ 379 (623)
.+.+..+.+.|..+.||++...+|..+++|..... ....+..|+.+++.+.+.++ .+++++...++..++||||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 44443333456679999998777888999997643 22457889999998865454 4588888877788999999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC------------------------------------- 422 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------------- 422 (623)
++|.++. ... .+ ...++.++++.|+.||+..
T Consensus 97 i~G~~l~--~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
T 1nd4_A 97 VPGQDLL--SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG 164 (264)
T ss_dssp CSSEETT--TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred cCCcccC--cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence 9998873 211 11 2356777888888888642
Q ss_pred ------------------CCCeEecCCCCCCeEECCCCcEEEeecccccc
Q 006968 423 ------------------DPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (623)
Q Consensus 423 ------------------~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~ 454 (623)
.+.++|||++|.||+++++..+.|+|||.+..
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998776667999998753
No 384
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.12 E-value=2.6e-12 Score=134.94 Aligned_cols=110 Identities=21% Similarity=0.273 Sum_probs=56.9
Q ss_pred cEEEEeCCCCCccc----ccCccccCC---------CCcceEEeecCCCC-CCCC---CccCCCCCccEEEecCCCCC--
Q 006968 75 YVSALGLPSQSLSG----TLSPWIGNL---------TKLQSVLLQNNAIL-GPIP---ASLGKLEKLQTLDLSNNKFT-- 135 (623)
Q Consensus 75 ~v~~L~L~~n~l~~----~~~~~~~~l---------~~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~Ls~N~l~-- 135 (623)
+++.|+|++|+|++ .++..+..+ ++|++|+|++|+++ +.+| ..+..+++|++|+|++|+|+
T Consensus 123 ~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~ 202 (386)
T 2ca6_A 123 PLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPE 202 (386)
T ss_dssp TCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHH
T ss_pred CCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHh
Confidence 45666666666542 233444444 55555555555554 2333 23445555555555555555
Q ss_pred C---CCCccccCCCCccchhccccccC----CCCCcccCCCCcccEEECCCCcCcC
Q 006968 136 G---EIPDSLGDLGNLNYLRLNNNSLT----GSCPESLSKIESLTLVDLSYNNLSG 184 (623)
Q Consensus 136 ~---~~p~~~~~l~~L~~L~l~~N~l~----~~~p~~~~~l~~L~~L~l~~N~l~~ 184 (623)
| .+|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.|++
T Consensus 203 g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~ 258 (386)
T 2ca6_A 203 GIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSA 258 (386)
T ss_dssp HHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCH
T ss_pred HHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCch
Confidence 1 22334555555555555555553 3445555555555555555555553
No 385
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.10 E-value=3.2e-12 Score=131.37 Aligned_cols=134 Identities=18% Similarity=0.192 Sum_probs=95.0
Q ss_pred CCCCcceeeeCCCCcEEEEeCCCCCcccccCccccCC--CCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCC-
Q 006968 61 DPCSWRMITCSPDGYVSALGLPSQSLSGTLSPWIGNL--TKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGE- 137 (623)
Q Consensus 61 ~~c~w~gv~c~~~~~v~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~- 137 (623)
-|.+|.++.|++ ..++.|++++|.+. +..+..+ ++++.|+|++|.+++..|. +.++++|++|+|++|.+++.
T Consensus 35 vc~~W~~~~~~~-~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 35 VCKRWYRLASDE-SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp SCHHHHHHHTCS-TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHHhcCc-hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 344788887763 35777888887776 3445566 7788888888888766554 55678888888888887755
Q ss_pred CCccccCCCCccchhccccccCCCCCcccCCCCcccEEECCCC-cCcCc-CCCCcc-----ccccccCC
Q 006968 138 IPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYN-NLSGS-LPKISA-----RTFKVTGN 199 (623)
Q Consensus 138 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~-~p~~~~-----~~~~~~~n 199 (623)
+|..+..+++|++|+|++|.+++..|..+..+++|+.|+|++| .+++. +|.... +.+++++|
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 178 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWC 178 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCC
Confidence 7777778888888888888887777777778888888888888 56642 333221 45666666
No 386
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.09 E-value=3.6e-10 Score=117.26 Aligned_cols=142 Identities=14% Similarity=0.200 Sum_probs=105.8
Q ss_pred CCceeccCCeEEEEEEeCCCcEEEEEEec--ccccccchHHHHHHHHHHhhcC--CCceeeeeeeeecC---CceEEEEe
Q 006968 306 KNILGRGGFGIVYKGCFSDGALVAVKRLK--DYNIAGGEVQFQTEVETISLAV--HRNLLRLCGFCSTE---NERLLVYP 378 (623)
Q Consensus 306 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~---~~~~lv~e 378 (623)
.+.++.|.++.||+.... +..+++|+.. ..........+.+|..+++.+. +..+.++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 467899999999999875 4678888875 3322223446889999999887 45577888888766 45899999
Q ss_pred cccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 006968 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC------------------------------------ 422 (623)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------------ 422 (623)
|++|..+.+.. ...++...+..++.++++.|+.||...
T Consensus 122 ~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 122 FVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred ecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99988764321 124678888999999999999999731
Q ss_pred -------------------CCCeEecCCCCCCeEECCCCc--EEEeecccccc
Q 006968 423 -------------------DPKIIHRDVKAANILLDEDFE--AVVGDFGLAKL 454 (623)
Q Consensus 423 -------------------~~~ivH~Dlk~~NIll~~~~~--~kl~Dfgla~~ 454 (623)
.+.++|||+++.||+++.++. +.|+||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999999864
No 387
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.08 E-value=2.8e-10 Score=126.13 Aligned_cols=55 Identities=29% Similarity=0.325 Sum_probs=35.3
Q ss_pred CCccchhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc--ccccccCCCCCCCC
Q 006968 146 GNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA--RTFKVTGNPLICGP 205 (623)
Q Consensus 146 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~~~~~~n~~~~~~ 205 (623)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|++ +|.... +.+++++|.+...+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~~~~~L~~L~Ls~N~L~~lp 277 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPMLPSGLLSLSVYRNQLTRLP 277 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCCSCC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCcccccCcEEeCCCCCCCcCC
Confidence 567777777777773 55 345677777888877774 444322 55677777765443
No 388
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.08 E-value=1.2e-11 Score=128.72 Aligned_cols=128 Identities=21% Similarity=0.235 Sum_probs=91.7
Q ss_pred cEEEEeCCCCCcccccC----ccccCCC-CcceEEeecCCCCCCCCCccCCC-----CCccEEEecCCCCCCCCCccccC
Q 006968 75 YVSALGLPSQSLSGTLS----PWIGNLT-KLQSVLLQNNAILGPIPASLGKL-----EKLQTLDLSNNKFTGEIPDSLGD 144 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~ 144 (623)
.++.|+|++|+|++..+ ..+.+++ +|++|+|++|++++..+..+..+ ++|++|+|++|++++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 48888888888887665 6677787 88888888888887766666664 88888888888888666654443
Q ss_pred ----C-CCccchhccccccCCCCCcc----cCC-CCcccEEECCCCcCcCcCCCC----------ccccccccCCCCC
Q 006968 145 ----L-GNLNYLRLNNNSLTGSCPES----LSK-IESLTLVDLSYNNLSGSLPKI----------SARTFKVTGNPLI 202 (623)
Q Consensus 145 ----l-~~L~~L~l~~N~l~~~~p~~----~~~-l~~L~~L~l~~N~l~~~~p~~----------~~~~~~~~~n~~~ 202 (623)
+ ++|++|+|++|++++..+.. +.. .++|+.|+|++|.|+...+.. .-+.+++++|.+.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCc
Confidence 3 78888888888887655444 333 358888888888888432221 1255667777653
No 389
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.07 E-value=1.3e-11 Score=126.85 Aligned_cols=110 Identities=23% Similarity=0.252 Sum_probs=89.6
Q ss_pred CcEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCC-CCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchh
Q 006968 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGP-IPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLR 152 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (623)
..++.|++++|.+++..+. +.++++|++|+|++|.+++. +|..+.++++|++|+|++|++++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4688888888888876655 55788888889988888765 777788888888888888888888888888888888888
Q ss_pred cccc-ccCC-CCCcccCCCCcccEEECCCC-cCcC
Q 006968 153 LNNN-SLTG-SCPESLSKIESLTLVDLSYN-NLSG 184 (623)
Q Consensus 153 l~~N-~l~~-~~p~~~~~l~~L~~L~l~~N-~l~~ 184 (623)
|++| .+++ .++..+..+++|+.|++++| .+++
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~ 183 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE 183 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh
Confidence 8888 6775 36666778888888888888 8875
No 390
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.06 E-value=7.8e-12 Score=131.23 Aligned_cols=130 Identities=22% Similarity=0.291 Sum_probs=109.4
Q ss_pred CcEEEEeCCCCCcc-cccC---ccccCCCCcceEEeecCCCC--C---CCCCccCCCCCccEEEecCCCCC----CCCCc
Q 006968 74 GYVSALGLPSQSLS-GTLS---PWIGNLTKLQSVLLQNNAIL--G---PIPASLGKLEKLQTLDLSNNKFT----GEIPD 140 (623)
Q Consensus 74 ~~v~~L~L~~n~l~-~~~~---~~~~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~ 140 (623)
..++.|+|++|+|+ +.++ ..+.++++|++|+|++|+++ | ..|..+.++++|++|+|++|+|+ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 48999999999998 4455 57788999999999999998 3 35558899999999999999996 67899
Q ss_pred cccCCCCccchhccccccCCC----CCccc--CCCCcccEEECCCCcCcC----cCCCCc------cccccccCCCCCC
Q 006968 141 SLGDLGNLNYLRLNNNSLTGS----CPESL--SKIESLTLVDLSYNNLSG----SLPKIS------ARTFKVTGNPLIC 203 (623)
Q Consensus 141 ~~~~l~~L~~L~l~~N~l~~~----~p~~~--~~l~~L~~L~l~~N~l~~----~~p~~~------~~~~~~~~n~~~~ 203 (623)
.+..+++|++|+|++|.+++. +|..+ +.+++|+.|+|++|.+++ .+|... -+.+++++|++..
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 999999999999999999865 56677 448999999999999998 466533 1568899998754
No 391
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.05 E-value=1.1e-11 Score=128.94 Aligned_cols=113 Identities=22% Similarity=0.221 Sum_probs=78.7
Q ss_pred cEEEEeCCCCCcccccCccccCC-----CCcceEEeecCCCCCCCCCccC----CC-CCccEEEecCCCCCCCCCcccc-
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNL-----TKLQSVLLQNNAILGPIPASLG----KL-EKLQTLDLSNNKFTGEIPDSLG- 143 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~~p~~~~- 143 (623)
+++.|+|++|+|++..+..+..+ ++|++|+|++|++++..+..+. .+ ++|++|+|++|+|++..+..+.
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 131 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ 131 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH
Confidence 68888888888887666666664 7888888888888766555433 33 7888888888888755554433
Q ss_pred ---C-CCCccchhccccccCCC----CCcccCCCC-cccEEECCCCcCcCcCC
Q 006968 144 ---D-LGNLNYLRLNNNSLTGS----CPESLSKIE-SLTLVDLSYNNLSGSLP 187 (623)
Q Consensus 144 ---~-l~~L~~L~l~~N~l~~~----~p~~~~~l~-~L~~L~l~~N~l~~~~p 187 (623)
. .++|++|+|++|.+++. ++..+..++ +|+.|+|++|+|++..+
T Consensus 132 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 184 (362)
T 3goz_A 132 AFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNC 184 (362)
T ss_dssp HHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH
T ss_pred HHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhH
Confidence 3 25788888888888753 333444554 78888888888876554
No 392
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.05 E-value=2.2e-10 Score=118.48 Aligned_cols=110 Identities=11% Similarity=0.095 Sum_probs=93.0
Q ss_pred EEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCc-cccCCCCccc-hhccc
Q 006968 78 ALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPD-SLGDLGNLNY-LRLNN 155 (623)
Q Consensus 78 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~-L~l~~ 155 (623)
.++-++++|+ .+|..+ .++|++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++|++ +.+++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4677899998 788766 46899999999999965556899999999999999999877775 6788998775 66778
Q ss_pred cccCCCCCcccCCCCcccEEECCCCcCcCcCCCCc
Q 006968 156 NSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKIS 190 (623)
Q Consensus 156 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 190 (623)
|++++..|..|..+++|+.|++++|+|++..+..+
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~ 124 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHK 124 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTT
T ss_pred CcccccCchhhhhccccccccccccccccCCchhh
Confidence 99997778899999999999999999997665443
No 393
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.90 E-value=1e-09 Score=111.09 Aligned_cols=186 Identities=19% Similarity=0.169 Sum_probs=120.7
Q ss_pred CCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcC-CCc--eeeeeeeeecCC---ceEEEEec
Q 006968 306 KNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-HRN--LLRLCGFCSTEN---ERLLVYPY 379 (623)
Q Consensus 306 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lv~e~ 379 (623)
.+.++.|.+..||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+.+.+....+ ..++|||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 4568999999999863 45888886432 23456889999998874 333 234444443332 34889999
Q ss_pred ccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------------------------------------
Q 006968 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ-------------------------------------- 421 (623)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-------------------------------------- 421 (623)
++|.++...... .++..++..++.++++.++.||..
T Consensus 98 i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 98 IKGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred cCCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 999887653321 367777888888888888888861
Q ss_pred -----------------CCCCeEecCCCCCCeEECC--CCcEEEeecccccccCCCCCceeecc--------------cc
Q 006968 422 -----------------CDPKIIHRDVKAANILLDE--DFEAVVGDFGLAKLLDHRDSHVTTAV--------------RG 468 (623)
Q Consensus 422 -----------------~~~~ivH~Dlk~~NIll~~--~~~~kl~Dfgla~~~~~~~~~~~~~~--------------~g 468 (623)
..+.++|+|+++.||++++ ...+.|+||+.+..-.... ...... ..
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~-Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN-DFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH-HHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH-HHHHHHhhccccCHHHHHHHHH
Confidence 1246899999999999998 4567899999986532210 000000 00
Q ss_pred cccccc-ccccccCCCCCccchhhHHHHHHHHHhCCCCCC
Q 006968 469 TVGHIA-PEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507 (623)
Q Consensus 469 t~~y~a-PE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~ 507 (623)
..+... |+... ......+.|+++.++|.+.+|..++.
T Consensus 251 ~Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 251 HYKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HcCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 001111 22211 11223589999999999999987763
No 394
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.85 E-value=4.9e-11 Score=117.08 Aligned_cols=125 Identities=21% Similarity=0.222 Sum_probs=85.6
Q ss_pred CCCCcceeeeCCCC-cEEEEeCCC---CCcccccCc-c-----------------------ccCCCCcce--EEeecCCC
Q 006968 61 DPCSWRMITCSPDG-YVSALGLPS---QSLSGTLSP-W-----------------------IGNLTKLQS--VLLQNNAI 110 (623)
Q Consensus 61 ~~c~w~gv~c~~~~-~v~~L~L~~---n~l~~~~~~-~-----------------------~~~l~~L~~--L~L~~N~l 110 (623)
..|.|.|+.|++++ +|..+...+ ..+.+.+++ . |...+.|.. ++++.|+.
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~ 155 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRR 155 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSH
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHH
Confidence 35789999998754 565555544 233333321 1 222233333 56666643
Q ss_pred CCCCCC----ccCCCCCccEEEecCCCCCC--CCCccccCCCCccchhccccccCCCCCcccCCCC--cccEEECCCCcC
Q 006968 111 LGPIPA----SLGKLEKLQTLDLSNNKFTG--EIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIE--SLTLVDLSYNNL 182 (623)
Q Consensus 111 ~~~~p~----~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~--~L~~L~l~~N~l 182 (623)
. .++. ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+
T Consensus 156 ~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 156 S-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp H-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTT
T ss_pred H-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcC
Confidence 3 2222 22457899999999999997 5667888999999999999999964 3344444 999999999999
Q ss_pred cCcCCC
Q 006968 183 SGSLPK 188 (623)
Q Consensus 183 ~~~~p~ 188 (623)
++.+|+
T Consensus 233 ~~~~~~ 238 (267)
T 3rw6_A 233 CDTFRD 238 (267)
T ss_dssp GGGCSS
T ss_pred ccccCc
Confidence 988774
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.84 E-value=3.5e-11 Score=129.26 Aligned_cols=111 Identities=21% Similarity=0.217 Sum_probs=74.4
Q ss_pred cEEEEeCCCCCccccc-----CccccCCCCcceEEeecCCCCCC----CCCccCCCCCccEEEecCCCCCCCCCccccC-
Q 006968 75 YVSALGLPSQSLSGTL-----SPWIGNLTKLQSVLLQNNAILGP----IPASLGKLEKLQTLDLSNNKFTGEIPDSLGD- 144 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~- 144 (623)
.++.|+|++|.+++.. +..+..+++|++|+|++|++++. ++..+.++++|++|+|++|.+++..+..+..
T Consensus 228 ~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~ 307 (461)
T 1z7x_W 228 SLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCET 307 (461)
T ss_dssp TCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHH
T ss_pred CccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHH
Confidence 6778888888777532 22233577788888888877743 5666667777888888888776544433332
Q ss_pred ----CCCccchhccccccCCC----CCcccCCCCcccEEECCCCcCcCc
Q 006968 145 ----LGNLNYLRLNNNSLTGS----CPESLSKIESLTLVDLSYNNLSGS 185 (623)
Q Consensus 145 ----l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ 185 (623)
.++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++.
T Consensus 308 l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 308 LLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp HTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHH
T ss_pred hccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccc
Confidence 25777777777777654 455566677777777777777653
No 396
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.73 E-value=2.3e-10 Score=122.77 Aligned_cols=129 Identities=19% Similarity=0.155 Sum_probs=101.8
Q ss_pred CcEEEEeCCCCCcccc----cCccccCCCCcceEEeecCCCCCCCCCccCC-----CCCccEEEecCCCCCCC----CCc
Q 006968 74 GYVSALGLPSQSLSGT----LSPWIGNLTKLQSVLLQNNAILGPIPASLGK-----LEKLQTLDLSNNKFTGE----IPD 140 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~----~p~ 140 (623)
.+++.|+|++|++++. ++..+.++++|++|+|++|.+++..+..+.. .++|++|+|++|.+++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 4799999999999874 6778888999999999999997543333332 36999999999999965 567
Q ss_pred cccCCCCccchhccccccCCCCCcccCC-----CCcccEEECCCCcCcC----cCCCCcc-----ccccccCCCCC
Q 006968 141 SLGDLGNLNYLRLNNNSLTGSCPESLSK-----IESLTLVDLSYNNLSG----SLPKISA-----RTFKVTGNPLI 202 (623)
Q Consensus 141 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~----~~p~~~~-----~~~~~~~n~~~ 202 (623)
.+..+++|++|+|++|.+++..+..+.. .++|+.|+|++|.+++ .+|..+. +.+++++|++.
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 7788899999999999998654444432 6799999999999985 5554322 66888998764
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.71 E-value=3.1e-10 Score=118.09 Aligned_cols=128 Identities=20% Similarity=0.192 Sum_probs=89.9
Q ss_pred CcEEEEeCCCCCcccccCccc-cCCCCcceEEeecCCCCCCCCCcc-----CCCCCccEEEecCCCCCC----CCCcccc
Q 006968 74 GYVSALGLPSQSLSGTLSPWI-GNLTKLQSVLLQNNAILGPIPASL-----GKLEKLQTLDLSNNKFTG----EIPDSLG 143 (623)
Q Consensus 74 ~~v~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~----~~p~~~~ 143 (623)
..++.|+|++|+|+......+ ..+++|+.|+|++|+|+..-...+ ...++|++|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 378899999998875433333 346688899999998874433333 346789999999998874 2455567
Q ss_pred CCCCccchhccccccCC----CCCcccCCCCcccEEECCCCcCcCc----CCCC-----ccccccccCCCC
Q 006968 144 DLGNLNYLRLNNNSLTG----SCPESLSKIESLTLVDLSYNNLSGS----LPKI-----SARTFKVTGNPL 201 (623)
Q Consensus 144 ~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~----~p~~-----~~~~~~~~~n~~ 201 (623)
.+++|++|+|++|.|++ .++..+..+++|+.|+|++|.|+.. ++.. .-+.+++++|++
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i 251 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNEL 251 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCC
Confidence 78889999999999874 2355677778899999999988742 1111 125677888875
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.68 E-value=9.5e-10 Score=114.37 Aligned_cols=111 Identities=21% Similarity=0.254 Sum_probs=89.6
Q ss_pred cEEEEeCCCCCcccccCccc-----cCCCCcceEEeecCCCCC----CCCCccCCCCCccEEEecCCCCCCC----CCcc
Q 006968 75 YVSALGLPSQSLSGTLSPWI-----GNLTKLQSVLLQNNAILG----PIPASLGKLEKLQTLDLSNNKFTGE----IPDS 141 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 141 (623)
+++.|+|++|+|+......+ ...++|++|+|++|.|+. .++..+..+++|++|||++|.|++. ++..
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~ 206 (372)
T 3un9_A 127 RARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQ 206 (372)
T ss_dssp TEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHH
T ss_pred hccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHH
Confidence 69999999999986544444 346889999999999974 2455567889999999999999842 3566
Q ss_pred ccCCCCccchhccccccCCC----CCcccCCCCcccEEECCCCcCcCc
Q 006968 142 LGDLGNLNYLRLNNNSLTGS----CPESLSKIESLTLVDLSYNNLSGS 185 (623)
Q Consensus 142 ~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ 185 (623)
+...++|++|+|++|.|++. ++..+..+++|+.|+|++|.|+..
T Consensus 207 L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 207 LDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp GGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 77889999999999999852 445566779999999999999853
No 399
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.65 E-value=2.9e-09 Score=104.43 Aligned_cols=80 Identities=28% Similarity=0.392 Sum_probs=66.9
Q ss_pred cCCCCcceEEeecCCCCC--CCCCccCCCCCccEEEecCCCCCCCCCccccCCC--CccchhccccccCCCCCc------
Q 006968 95 GNLTKLQSVLLQNNAILG--PIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLG--NLNYLRLNNNSLTGSCPE------ 164 (623)
Q Consensus 95 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~------ 164 (623)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568899999999999997 5567778899999999999999954 4455555 999999999999987763
Q ss_pred -ccCCCCcccEEE
Q 006968 165 -SLSKIESLTLVD 176 (623)
Q Consensus 165 -~~~~l~~L~~L~ 176 (623)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 367788998886
No 400
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.58 E-value=3.2e-07 Score=93.31 Aligned_cols=136 Identities=18% Similarity=0.179 Sum_probs=99.6
Q ss_pred CCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCC---C-ceeeeeeeeecCCceEEEE
Q 006968 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVH---R-NLLRLCGFCSTENERLLVY 377 (623)
Q Consensus 302 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H---~-niv~l~~~~~~~~~~~lv~ 377 (623)
.+...+.++.|....||+. |..+++|+..... ....+.+|.+++..+.+ + .+.+++++ +..++||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~---~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS---VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH---HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH---HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 5556678999999999998 6678888764321 23458899999988866 1 22344444 5678999
Q ss_pred ecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 006968 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC----------------------------------- 422 (623)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----------------------------------- 422 (623)
||++|.++..... ..++...+..++.++++.++.||+..
T Consensus 107 e~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 107 KYIKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp ECCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred eecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 9999988764321 13566677778888888888888532
Q ss_pred -------------------------CCCeEecCCCCCCeEECCCCcEEEeecccccc
Q 006968 423 -------------------------DPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (623)
Q Consensus 423 -------------------------~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~ 454 (623)
.+.++|+|++|.||+++.+..+.|+||+.+..
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 12459999999999999866679999999864
No 401
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.48 E-value=6.3e-09 Score=96.93 Aligned_cols=110 Identities=15% Similarity=0.194 Sum_probs=87.5
Q ss_pred CcEEEEeCCCC-Cccc----ccCccccCCCCcceEEeecCCCCCC----CCCccCCCCCccEEEecCCCCCCC----CCc
Q 006968 74 GYVSALGLPSQ-SLSG----TLSPWIGNLTKLQSVLLQNNAILGP----IPASLGKLEKLQTLDLSNNKFTGE----IPD 140 (623)
Q Consensus 74 ~~v~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~ 140 (623)
..++.|+|++| .|.. .+...+...++|++|+|++|+|+.. +...+...++|++|+|++|.|+.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 37999999999 8875 3556677788999999999999742 344556678899999999999853 456
Q ss_pred cccCCCCccchhc--cccccCCC----CCcccCCCCcccEEECCCCcCc
Q 006968 141 SLGDLGNLNYLRL--NNNSLTGS----CPESLSKIESLTLVDLSYNNLS 183 (623)
Q Consensus 141 ~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 183 (623)
.+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 7778889999999 88999753 4455666789999999999886
No 402
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.46 E-value=1.1e-06 Score=87.76 Aligned_cols=142 Identities=22% Similarity=0.218 Sum_probs=93.7
Q ss_pred cCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCC---ceeeeeeeeecCCceEEEEeccc
Q 006968 305 AKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHR---NLLRLCGFCSTENERLLVYPYMP 381 (623)
Q Consensus 305 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~~~~~~~lv~e~~~ 381 (623)
..+.|+.|.++.||++...+|+.++||+..... ......|..|++.|+.+.+. .+.+++++. ..++||||++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 356799999999999998889999999975332 22345789999999999875 466777653 4799999999
Q ss_pred CCChhh-----------hhhhccCC-----------------CCCCCHHHHHH---H-----------------HHHHHH
Q 006968 382 NGSVAS-----------RLRDHIHG-----------------RPALDWARRKR---I-----------------ALGTAR 413 (623)
Q Consensus 382 ~gsL~~-----------~l~~~~~~-----------------~~~l~~~~~~~---i-----------------~~~ia~ 413 (623)
++.+.. .|+..... ...-+|..... + ...+-+
T Consensus 94 g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~ 173 (288)
T 3d1u_A 94 ERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEK 173 (288)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 987531 12221110 00124443211 0 111122
Q ss_pred HHHHHH----hCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 414 GLLYLH----EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 414 ~L~~LH----~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
.+..+. ....+.++|+|+.+.||+++.+ .+.|+|| .+.
T Consensus 174 l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 174 VLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 233332 2335689999999999999884 5889999 654
No 403
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.45 E-value=2.3e-07 Score=94.75 Aligned_cols=100 Identities=15% Similarity=0.104 Sum_probs=62.3
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCcc-EEEecCCCCCCCCCccccCCCCccchhc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQ-TLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 153 (623)
.++.|+|++|+++...+..|.++++|+.|+|++| ++..-+.+|.+|++|+ .|+|++ +++..-+..|.+|++|+.|+|
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l 304 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLA 304 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEE
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEe
Confidence 5666666666666444456666666666666666 5544455666666666 666666 555333456666666666666
Q ss_pred cccccCCCCCcccCCCCcccEEE
Q 006968 154 NNNSLTGSCPESLSKIESLTLVD 176 (623)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~ 176 (623)
++|+++..-+..|.++++|+.|+
T Consensus 305 ~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 305 TGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CSSCCCEECTTTTCTTCCCCEEE
T ss_pred CCCccCccchhhhcCCcchhhhc
Confidence 66666644444666666666665
No 404
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.35 E-value=7.4e-07 Score=90.90 Aligned_cols=127 Identities=15% Similarity=0.137 Sum_probs=88.1
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccC-----------------------------------
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLG----------------------------------- 119 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~----------------------------------- 119 (623)
.++.|+|++ +++..-+..|.++++|+.|+|++|.+....+..|.
T Consensus 102 ~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~ 180 (329)
T 3sb4_A 102 TLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLET 180 (329)
T ss_dssp TCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEE
T ss_pred CCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccce
Confidence 688888888 78766667788888888888888875321111110
Q ss_pred -------------------------------------------CCCCccEEEecCCCCCCCCCccccCCCCccchhcccc
Q 006968 120 -------------------------------------------KLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNN 156 (623)
Q Consensus 120 -------------------------------------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 156 (623)
.+++|+.|+|++|+++..-+..|.++++|+.|+|++|
T Consensus 181 ~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n 260 (329)
T 3sb4_A 181 TIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN 260 (329)
T ss_dssp EEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT
T ss_pred eEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc
Confidence 1678888899988888444456888889999999888
Q ss_pred ccCCCCCcccCCCCccc-EEECCCCcCcCcCCCCcc-----ccccccCCCCCCC
Q 006968 157 SLTGSCPESLSKIESLT-LVDLSYNNLSGSLPKISA-----RTFKVTGNPLICG 204 (623)
Q Consensus 157 ~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~ 204 (623)
++..-+..|.++++|+ .|++.+ +++..-+..+. +.+.+.+|.+...
T Consensus 261 -i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I 312 (329)
T 3sb4_A 261 -LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTL 312 (329)
T ss_dssp -CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEE
T ss_pred -cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCcc
Confidence 7645556788888898 888887 66644444443 4456666665443
No 405
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.30 E-value=1.3e-08 Score=112.76 Aligned_cols=127 Identities=15% Similarity=0.101 Sum_probs=79.5
Q ss_pred cEEEEeCCCCCcccccCccccC-CCCcceEEee----cCCCCCC-----CCCccCCCCCccEEEecCC--CCCCCCCccc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGN-LTKLQSVLLQ----NNAILGP-----IPASLGKLEKLQTLDLSNN--KFTGEIPDSL 142 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~ 142 (623)
+++.|+|+.|++++..+..++. +++|+.|+|+ .|++++. ++..+.++++|++|+|+++ .+++..+..+
T Consensus 379 ~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~ 458 (592)
T 3ogk_B 379 ELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYI 458 (592)
T ss_dssp TCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHH
T ss_pred cCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHH
Confidence 5666777666666655555554 6777777775 5666642 2223555777777777643 3555544444
Q ss_pred cC-CCCccchhccccccCC-CCCcccCCCCcccEEECCCCcCcCc-CCCCc-----cccccccCCCC
Q 006968 143 GD-LGNLNYLRLNNNSLTG-SCPESLSKIESLTLVDLSYNNLSGS-LPKIS-----ARTFKVTGNPL 201 (623)
Q Consensus 143 ~~-l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~-----~~~~~~~~n~~ 201 (623)
+. +++|++|+|++|++++ .++..+..+++|+.|+|++|.|++. ++... -+.+++++|++
T Consensus 459 ~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~i 525 (592)
T 3ogk_B 459 GQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRA 525 (592)
T ss_dssp HHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBC
T ss_pred HHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcC
Confidence 43 7778888888888775 3455567778888888888887643 22211 15567777774
No 406
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.29 E-value=4.3e-06 Score=84.25 Aligned_cols=136 Identities=18% Similarity=0.181 Sum_probs=92.0
Q ss_pred CCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCC---ceeeeeeeee-cCCceEEEEeccc
Q 006968 306 KNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHR---NLLRLCGFCS-TENERLLVYPYMP 381 (623)
Q Consensus 306 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~-~~~~~~lv~e~~~ 381 (623)
.+.++.|....||+. |..+++|+... ......+.+|.+++..+.+. .+.+.+.++. ..+..++||||++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 356788888999997 56688887532 12345688999999998753 2445566663 4556789999999
Q ss_pred CCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC----------------------------------------
Q 006968 382 NGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ---------------------------------------- 421 (623)
Q Consensus 382 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~---------------------------------------- 421 (623)
|..+...... .++......++.++++.|+.||+.
T Consensus 97 G~~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (306)
T 3tdw_A 97 GQILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD 170 (306)
T ss_dssp SEECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred CeECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence 9887653211 133444444555555555555532
Q ss_pred -----------------CCCCeEecCCCCCCeEECC---CCcE-EEeecccccc
Q 006968 422 -----------------CDPKIIHRDVKAANILLDE---DFEA-VVGDFGLAKL 454 (623)
Q Consensus 422 -----------------~~~~ivH~Dlk~~NIll~~---~~~~-kl~Dfgla~~ 454 (623)
..+.++|+|+++.||+++. ++.+ .|+||+.+..
T Consensus 171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2346799999999999997 4554 7999998864
No 407
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.29 E-value=3.3e-06 Score=83.35 Aligned_cols=135 Identities=19% Similarity=0.137 Sum_probs=95.1
Q ss_pred ceeccCCe-EEEEEEeC-CCcEEEEEEecccccccchHHHHHHHHHHhhcC-CCceeeeeeeeecCCceEEEEecccCCC
Q 006968 308 ILGRGGFG-IVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-HRNLLRLCGFCSTENERLLVYPYMPNGS 384 (623)
Q Consensus 308 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~gs 384 (623)
.+..|..| .||+.... ++..+++|+-... ....+.+|...|+.+. +--+-++++++...+..++|||++++.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 45556666 69988765 4667899986532 2346788999988774 2235577888888889999999999988
Q ss_pred hhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-------------------------------------------
Q 006968 385 VASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ------------------------------------------- 421 (623)
Q Consensus 385 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~------------------------------------------- 421 (623)
+.+..... ......+..+++..|+.||..
T Consensus 107 ~~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 107 AFQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred ccccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 76654321 112234556666666666642
Q ss_pred ------------CCCCeEecCCCCCCeEECCCCcEEEeecccccc
Q 006968 422 ------------CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (623)
Q Consensus 422 ------------~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~ 454 (623)
..+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012389999999999999877677999998864
No 408
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.23 E-value=2.8e-06 Score=87.62 Aligned_cols=81 Identities=9% Similarity=-0.058 Sum_probs=55.0
Q ss_pred Cce-eccCCeEEEEEEeC-------CCcEEEEEEeccccc--ccchHHHHHHHHHHhhcC-C--CceeeeeeeeecC---
Q 006968 307 NIL-GRGGFGIVYKGCFS-------DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAV-H--RNLLRLCGFCSTE--- 370 (623)
Q Consensus 307 ~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~-H--~niv~l~~~~~~~--- 370 (623)
+.| +.|....+|+.... ++..+++|+...... ......+.+|..+++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 78888999998764 267788998654320 101245788888888774 2 2456777777554
Q ss_pred CceEEEEecccCCChhh
Q 006968 371 NERLLVYPYMPNGSVAS 387 (623)
Q Consensus 371 ~~~~lv~e~~~~gsL~~ 387 (623)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35789999999877653
No 409
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.23 E-value=5e-06 Score=85.88 Aligned_cols=143 Identities=10% Similarity=0.032 Sum_probs=89.9
Q ss_pred cCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCc--eeeeeeeeecC-CceEEEEeccc
Q 006968 305 AKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN--LLRLCGFCSTE-NERLLVYPYMP 381 (623)
Q Consensus 305 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~-~~~~lv~e~~~ 381 (623)
..+.++.|....+|+... +|..+++|..... ..+..|..++..+.... +.++++++... +..++||||++
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 356788999999999876 6788999987432 25888999998886533 34566666554 66899999999
Q ss_pred CCChhhh------------------hhhccCCC---------C----CCCHHHHH---------------------HHHH
Q 006968 382 NGSVASR------------------LRDHIHGR---------P----ALDWARRK---------------------RIAL 409 (623)
Q Consensus 382 ~gsL~~~------------------l~~~~~~~---------~----~l~~~~~~---------------------~i~~ 409 (623)
|.++.+. |+...... . .-+|.... ....
T Consensus 118 G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 197 (362)
T 3ovc_A 118 GVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQ 197 (362)
T ss_dssp SEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchH
Confidence 8665421 11110000 0 00121110 1111
Q ss_pred HHHHHHHHHHhC-CCCCeEecCCCCCCeEECCCCcEEEeecccccc
Q 006968 410 GTARGLLYLHEQ-CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (623)
Q Consensus 410 ~ia~~L~~LH~~-~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~ 454 (623)
.+...+.++... ..+.++|+|+.+.||+++++..+.|+||+.+..
T Consensus 198 ~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 198 ALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 222223333221 125789999999999998777788999999875
No 410
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.14 E-value=3.3e-07 Score=101.40 Aligned_cols=104 Identities=11% Similarity=0.121 Sum_probs=64.6
Q ss_pred cEEEEeCCCCC-ccc-ccCccccCCCCcceEEeecCCCCCC----CCCccCCCCCccEEEecCCCCC----CCCCccccC
Q 006968 75 YVSALGLPSQS-LSG-TLSPWIGNLTKLQSVLLQNNAILGP----IPASLGKLEKLQTLDLSNNKFT----GEIPDSLGD 144 (623)
Q Consensus 75 ~v~~L~L~~n~-l~~-~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~ 144 (623)
+++.|+|++|. ++. .++....++++|++|+|++|.+++. ++..+.++++|++|+|++|.++ +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 37777777665 221 1222334667777777777777654 2333455677777777777776 234444556
Q ss_pred CCCccchhccccccCCCCCcccCCCCcccEEECCC
Q 006968 145 LGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSY 179 (623)
Q Consensus 145 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 179 (623)
+++|+.|+|++|.+.+ +|..+..+++|+.|++++
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 7777777777777763 556666666666666664
No 411
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.05 E-value=2.3e-05 Score=79.96 Aligned_cols=141 Identities=17% Similarity=0.214 Sum_probs=79.9
Q ss_pred CceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcC-----CCceeeee-e--eeecCCceEEEEe
Q 006968 307 NILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-----HRNLLRLC-G--FCSTENERLLVYP 378 (623)
Q Consensus 307 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~-~--~~~~~~~~~lv~e 378 (623)
+.|+.|..+.||+....+| .+++|+.... ...+..|..++..+. .|.++... | +....+..+++|+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP-----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC-----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC-----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 3466677899999987555 4889998642 223344555555442 24443311 1 1123567889999
Q ss_pred cccCCChh--------------hhhhhccCCC----------CCCCHHHHH-----------------------------
Q 006968 379 YMPNGSVA--------------SRLRDHIHGR----------PALDWARRK----------------------------- 405 (623)
Q Consensus 379 ~~~~gsL~--------------~~l~~~~~~~----------~~l~~~~~~----------------------------- 405 (623)
|++|..+. ..++...... ..-.|....
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 1122211100 012332211
Q ss_pred --HHHHHHHHHHHHHHh----------CCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 406 --RIALGTARGLLYLHE----------QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 406 --~i~~~ia~~L~~LH~----------~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
.+...+..++.+|+. ...+.++|||+++.||+++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223446667763 123489999999999999888889999999875
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.03 E-value=3e-07 Score=85.44 Aligned_cols=98 Identities=21% Similarity=0.228 Sum_probs=78.6
Q ss_pred ccccCccccCCCCcceEEeecC-CCCCC----CCCccCCCCCccEEEecCCCCCCC----CCccccCCCCccchhccccc
Q 006968 87 SGTLSPWIGNLTKLQSVLLQNN-AILGP----IPASLGKLEKLQTLDLSNNKFTGE----IPDSLGDLGNLNYLRLNNNS 157 (623)
Q Consensus 87 ~~~~~~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~ 157 (623)
...+...+...++|++|+|++| .|... +...+...++|++|+|++|+|+.. +...+...++|++|+|++|.
T Consensus 25 ~~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~ 104 (185)
T 1io0_A 25 EETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNF 104 (185)
T ss_dssp HHHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSC
T ss_pred HHHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCc
Confidence 3345566778899999999999 88732 445667789999999999999842 34556667899999999999
Q ss_pred cCCC----CCcccCCCCcccEEEC--CCCcCcC
Q 006968 158 LTGS----CPESLSKIESLTLVDL--SYNNLSG 184 (623)
Q Consensus 158 l~~~----~p~~~~~l~~L~~L~l--~~N~l~~ 184 (623)
|+.. +...+...++|+.|+| ++|.|+.
T Consensus 105 i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 105 ISGSGILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp CCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred CCHHHHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 9853 5667888899999999 8899984
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.00 E-value=6e-07 Score=92.51 Aligned_cols=107 Identities=15% Similarity=0.218 Sum_probs=66.0
Q ss_pred CcEEEEeCCCCC-cccccCccccCCCCcceEEeecCCCCCCCCCccC--CCCCccEEEecC--CCCCCC-----CCccc-
Q 006968 74 GYVSALGLPSQS-LSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLG--KLEKLQTLDLSN--NKFTGE-----IPDSL- 142 (623)
Q Consensus 74 ~~v~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~- 142 (623)
.+++.|+|++|. + .+++ + .+++|+.|+|..|.++......+. .+++|+.|+|+. |...|. +...+
T Consensus 172 P~L~~L~L~g~~~l--~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL--SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp TTCCEEEEECCBTC--BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCcEEEEeCCCCc--eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 478888887763 3 2333 3 377888888888777633222332 677888888763 222211 11122
Q ss_pred -cCCCCccchhccccccCCCCCccc---CCCCcccEEECCCCcCcC
Q 006968 143 -GDLGNLNYLRLNNNSLTGSCPESL---SKIESLTLVDLSYNNLSG 184 (623)
Q Consensus 143 -~~l~~L~~L~l~~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~~ 184 (623)
..+++|++|+|++|.+.+..+..+ ..+++|+.|+|+.|.|++
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 246788888888888764333223 246788888888888875
No 414
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.96 E-value=3.7e-05 Score=80.40 Aligned_cols=76 Identities=12% Similarity=0.064 Sum_probs=49.4
Q ss_pred CCceeccCCeEEEEEEeC-CCcEEEEEEeccccc------ccchHHHHHHHHHHhhcCC--Ccee-eeeeeeecCCceEE
Q 006968 306 KNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI------AGGEVQFQTEVETISLAVH--RNLL-RLCGFCSTENERLL 375 (623)
Q Consensus 306 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~e~~~l~~l~H--~niv-~l~~~~~~~~~~~l 375 (623)
.+.||.|.++.||++... +++.++||....... ......+..|.++++.+.. +..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999764 468899998653221 1123356788888887742 4444 44443 3456789
Q ss_pred EEecccCC
Q 006968 376 VYPYMPNG 383 (623)
Q Consensus 376 v~e~~~~g 383 (623)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 415
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.94 E-value=1.1e-07 Score=105.29 Aligned_cols=63 Identities=16% Similarity=0.205 Sum_probs=27.1
Q ss_pred CCCCccEEEecCCCCCCCCCccccC-CCCccchhccccccCCCCCccc-CCCCcccEEECCCCcCc
Q 006968 120 KLEKLQTLDLSNNKFTGEIPDSLGD-LGNLNYLRLNNNSLTGSCPESL-SKIESLTLVDLSYNNLS 183 (623)
Q Consensus 120 ~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~ 183 (623)
++++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.++
T Consensus 430 ~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 430 HCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred hCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 344444444443 333333333333 4445555555555443222222 33455555555555543
No 416
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.91 E-value=3e-07 Score=101.72 Aligned_cols=89 Identities=13% Similarity=0.158 Sum_probs=67.3
Q ss_pred ccCCCCcceEEeecCCCCCCCCCccCC-CCCccEEEecCCCCCCCCCccc-cCCCCccchhccccccCCCCCc-ccCCCC
Q 006968 94 IGNLTKLQSVLLQNNAILGPIPASLGK-LEKLQTLDLSNNKFTGEIPDSL-GDLGNLNYLRLNNNSLTGSCPE-SLSKIE 170 (623)
Q Consensus 94 ~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~-~~~~l~ 170 (623)
+.++++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++.... .+..++
T Consensus 428 ~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~ 506 (594)
T 2p1m_B 428 VEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLE 506 (594)
T ss_dssp HHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGG
T ss_pred HhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCC
Confidence 45566777777755 555443444544 8899999999999987655555 6699999999999999654333 445689
Q ss_pred cccEEECCCCcCc
Q 006968 171 SLTLVDLSYNNLS 183 (623)
Q Consensus 171 ~L~~L~l~~N~l~ 183 (623)
+|+.|++++|+++
T Consensus 507 ~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 507 TMRSLWMSSCSVS 519 (594)
T ss_dssp GSSEEEEESSCCB
T ss_pred CCCEEeeeCCCCC
Confidence 9999999999985
No 417
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.71 E-value=0.0002 Score=71.90 Aligned_cols=139 Identities=17% Similarity=0.150 Sum_probs=92.0
Q ss_pred CCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcC---CCceeeeeeeeecCCceEEEEecccC
Q 006968 306 KNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV---HRNLLRLCGFCSTENERLLVYPYMPN 382 (623)
Q Consensus 306 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~~lv~e~~~~ 382 (623)
.+.|+.|.+..+|+... ++..+++|+.... ....+..|.+.|+.+. ...+.++++++...+..++||||+++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 45689999999999886 5678889987542 2456888998888774 25677888888777889999999998
Q ss_pred CChhh-----------hhhhccC-C-----------------CCCCCHHHHH---HHHH----------------HHHHH
Q 006968 383 GSVAS-----------RLRDHIH-G-----------------RPALDWARRK---RIAL----------------GTARG 414 (623)
Q Consensus 383 gsL~~-----------~l~~~~~-~-----------------~~~l~~~~~~---~i~~----------------~ia~~ 414 (623)
..+.. .|+.... . ...-+|.... ++.. .+.+.
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 86521 1222211 0 0012565432 1111 11111
Q ss_pred -HHHHHh-CCCCCeEecCCCCCCeEECCCCcEEEeecc
Q 006968 415 -LLYLHE-QCDPKIIHRDVKAANILLDEDFEAVVGDFG 450 (623)
Q Consensus 415 -L~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfg 450 (623)
...|.. ...+.++|+|+.+.|++++.++ +.|.||+
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 123321 2356899999999999999887 8899974
No 418
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.69 E-value=5.7e-05 Score=79.02 Aligned_cols=122 Identities=14% Similarity=0.114 Sum_probs=85.8
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCC-----CCCCccccCCCCcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFT-----GEIPDSLGDLGNLN 149 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~ 149 (623)
.++.|+|+++ ++..-...|.+ .+|+.+.|. |+++..-+.+|.+|++|+.++|.+|.+. ..-+..|.+|++|+
T Consensus 227 ~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~ 303 (401)
T 4fdw_A 227 QLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLA 303 (401)
T ss_dssp TCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCC
T ss_pred CCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCC
Confidence 6788888764 66455566766 789999994 5566555778899999999999988775 24456788899999
Q ss_pred chhccccccCCCCCcccCCCCcccEEECCCCcCcCcCCCCcc----ccccccCCCC
Q 006968 150 YLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPL 201 (623)
Q Consensus 150 ~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~ 201 (623)
.++|. |.++..-...|.+|++|+.|+|.+| ++..-+..+. +.+.+.+|..
T Consensus 304 ~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~~ 357 (401)
T 4fdw_A 304 RFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTTP 357 (401)
T ss_dssp EECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSSC
T ss_pred eEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCCC
Confidence 99998 4476445567888899999999655 5532222222 4455666643
No 419
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.63 E-value=7.7e-06 Score=74.35 Aligned_cols=83 Identities=14% Similarity=0.145 Sum_probs=43.1
Q ss_pred CcceEEeecCCCCCCCCCccCCCCCccEEEecCCC-CCCCCCccccCC----CCccchhccccc-cCCCCCcccCCCCcc
Q 006968 99 KLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNK-FTGEIPDSLGDL----GNLNYLRLNNNS-LTGSCPESLSKIESL 172 (623)
Q Consensus 99 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~p~~~~~l~~L 172 (623)
.|+.|||+++.|+..--..+.++++|+.|+|+++. |+..--..++.+ ++|++|+|+++. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45666666665553322345556666666666653 543222334433 246666666653 543222234556666
Q ss_pred cEEECCCCc
Q 006968 173 TLVDLSYNN 181 (623)
Q Consensus 173 ~~L~l~~N~ 181 (623)
+.|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666653
No 420
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.59 E-value=0.00031 Score=73.91 Aligned_cols=78 Identities=13% Similarity=0.055 Sum_probs=47.8
Q ss_pred CCCeEecCCCCCCeEECCCCcEEEeecccccccCCCCCceeeccc-cccccccccccccC---CCCCccchhhHHHHHHH
Q 006968 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVR-GTVGHIAPEYLSTG---QSSEKTDVFGFGILLLE 498 (623)
Q Consensus 423 ~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~-gt~~y~aPE~~~~~---~~~~~~Dv~SlGvil~e 498 (623)
.+.++|||+++.||+++.++ ++++||+.+..-.... ....... -...|.+|+..... ......++......+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~-Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF-DIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH-HHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH-HHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34899999999999999876 9999999987532110 0000000 11346666654321 11223455677888888
Q ss_pred HHhC
Q 006968 499 LITG 502 (623)
Q Consensus 499 lltg 502 (623)
.+++
T Consensus 309 ~y~~ 312 (420)
T 2pyw_A 309 LFNK 312 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.53 E-value=0.00028 Score=70.08 Aligned_cols=79 Identities=18% Similarity=0.225 Sum_probs=55.6
Q ss_pred CCCcCCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCC---ceeeeeeeeecCCceEEEEe
Q 006968 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHR---NLLRLCGFCSTENERLLVYP 378 (623)
Q Consensus 302 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~~~~~~~lv~e 378 (623)
.....+.+|.|..+.||+....||+.|.||+..... ......|..|...|+.+.-. -+.+++++ +..++|||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e 90 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAME 90 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC-cchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEE
Confidence 344567799999999999999999999999865432 22233578899998877422 23344443 23578999
Q ss_pred cccCCCh
Q 006968 379 YMPNGSV 385 (623)
Q Consensus 379 ~~~~gsL 385 (623)
|++++..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9987653
No 422
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.49 E-value=0.00027 Score=73.81 Aligned_cols=105 Identities=13% Similarity=0.101 Sum_probs=82.9
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.+.|.+ +++..-...|.++++|+.|+|.+| ++..-..+|.+ .+|+.++| .|.++..-+..|.++++|+.+++.
T Consensus 204 ~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~ 279 (401)
T 4fdw_A 204 GIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTY 279 (401)
T ss_dssp CCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEE
T ss_pred ccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeC
Confidence 688888984 477666778999999999999976 56455567777 79999999 556774556789999999999999
Q ss_pred ccccC-----CCCCcccCCCCcccEEECCCCcCcC
Q 006968 155 NNSLT-----GSCPESLSKIESLTLVDLSYNNLSG 184 (623)
Q Consensus 155 ~N~l~-----~~~p~~~~~l~~L~~L~l~~N~l~~ 184 (623)
+|.+. ..-+..|..|++|+.++|.+ .++.
T Consensus 280 ~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~ 313 (401)
T 4fdw_A 280 GSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRI 313 (401)
T ss_dssp SSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCE
T ss_pred CccccCCcccEECHHHhhCCccCCeEEeCC-ceEE
Confidence 98875 24456789999999999984 4663
No 423
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.42 E-value=0.00049 Score=68.81 Aligned_cols=71 Identities=8% Similarity=0.008 Sum_probs=44.0
Q ss_pred CCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCce-eeeeeeeecCCceEEEEecc-cCC
Q 006968 306 KNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL-LRLCGFCSTENERLLVYPYM-PNG 383 (623)
Q Consensus 306 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~-~~g 383 (623)
.+.|+.|....+|+. ..+++|+...... ......+|..+++.+....+ .++++++ .+..++++||+ ++.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~--~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE--EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc--ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCc
Confidence 577888999999998 4588888754311 11234567777776643233 3444443 44467899999 554
Q ss_pred Ch
Q 006968 384 SV 385 (623)
Q Consensus 384 sL 385 (623)
++
T Consensus 94 ~l 95 (301)
T 3dxq_A 94 TM 95 (301)
T ss_dssp EC
T ss_pred cC
Confidence 44
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.40 E-value=2.1e-05 Score=71.50 Aligned_cols=85 Identities=15% Similarity=0.165 Sum_probs=67.1
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCC-CCCCCCCccCCC----CCccEEEecCCC-CCCCCCccccCCCCc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNA-ILGPIPASLGKL----EKLQTLDLSNNK-FTGEIPDSLGDLGNL 148 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 148 (623)
+++.|||+++.|+..--..+.++++|+.|+|+++. |+..--..+..+ ++|++|+|+++. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 69999999999987655678899999999999985 664322334543 479999999975 885544567889999
Q ss_pred cchhccccc-cC
Q 006968 149 NYLRLNNNS-LT 159 (623)
Q Consensus 149 ~~L~l~~N~-l~ 159 (623)
++|+|+++. ++
T Consensus 142 ~~L~L~~c~~It 153 (176)
T 3e4g_A 142 KYLFLSDLPGVK 153 (176)
T ss_dssp CEEEEESCTTCC
T ss_pred CEEECCCCCCCC
Confidence 999999975 55
No 425
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.33 E-value=3.4e-05 Score=79.35 Aligned_cols=125 Identities=14% Similarity=0.186 Sum_probs=82.0
Q ss_pred CcEEEEeCCCCCcc---------cccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCcccc-
Q 006968 74 GYVSALGLPSQSLS---------GTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLG- 143 (623)
Q Consensus 74 ~~v~~L~L~~n~l~---------~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~- 143 (623)
.+++.|.+.++... +.++..+..+++|+.|+|++|.-. .+|. + .+++|+.|+|..|.++......+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHH
Confidence 37888888665431 234556677899999999988422 3444 4 388999999999988754444444
Q ss_pred -CCCCccchhccc--cccCCC-----CCccc--CCCCcccEEECCCCcCcCcCCC-------Cc-cccccccCCCC
Q 006968 144 -DLGNLNYLRLNN--NSLTGS-----CPESL--SKIESLTLVDLSYNNLSGSLPK-------IS-ARTFKVTGNPL 201 (623)
Q Consensus 144 -~l~~L~~L~l~~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~~~~p~-------~~-~~~~~~~~n~~ 201 (623)
.+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.++...+. .. .+.++++.|.+
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L 291 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCC
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCC
Confidence 789999999863 332221 11223 3578999999999998743221 11 15677777654
No 426
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.32 E-value=1.8e-05 Score=73.39 Aligned_cols=108 Identities=19% Similarity=0.201 Sum_probs=61.2
Q ss_pred cEEEEeCCCC-Cccc----ccCccccCCCCcceEEeecCCCCCC----CCCccCCCCCccEEEecCCCCCCC----CCcc
Q 006968 75 YVSALGLPSQ-SLSG----TLSPWIGNLTKLQSVLLQNNAILGP----IPASLGKLEKLQTLDLSNNKFTGE----IPDS 141 (623)
Q Consensus 75 ~v~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 141 (623)
.++.|+|++| +|.. .+...+..-+.|+.|+|++|+|... +.+.+..-+.|+.|+|++|+|+.. +-..
T Consensus 42 ~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~a 121 (197)
T 1pgv_A 42 DLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRS 121 (197)
T ss_dssp SCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHH
T ss_pred CccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHH
Confidence 5777777764 6643 2344555566777777777777622 233344556677777777777632 2233
Q ss_pred ccCCCCccchhccccc---cCC----CCCcccCCCCcccEEECCCCcC
Q 006968 142 LGDLGNLNYLRLNNNS---LTG----SCPESLSKIESLTLVDLSYNNL 182 (623)
Q Consensus 142 ~~~l~~L~~L~l~~N~---l~~----~~p~~~~~l~~L~~L~l~~N~l 182 (623)
+..-+.|++|+|++|. +.. .+...+..-+.|+.|+++.|.+
T Consensus 122 L~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 122 TLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp TTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 4444567777776542 221 1233444556677777665543
No 427
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.31 E-value=0.0016 Score=65.57 Aligned_cols=159 Identities=11% Similarity=0.044 Sum_probs=88.6
Q ss_pred cCHHHHHHHhcCCCcC-----CceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCc--eeee
Q 006968 291 YTFKELRAATSNFSAK-----NILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN--LLRL 363 (623)
Q Consensus 291 ~~~~~l~~~~~~~~~~-----~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l 363 (623)
++.+++......|... +.|+.|....+|+....+| .+++|+..... ....+..|..++..+.... +.++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~---~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV---EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC---CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 4556666666666542 3466688889999987665 57889886521 1234566777776664222 2233
Q ss_pred eee------eecCCceEEEEecccCCChhh--------------hhhhccCC---C--CC---CCHHHHHH---------
Q 006968 364 CGF------CSTENERLLVYPYMPNGSVAS--------------RLRDHIHG---R--PA---LDWARRKR--------- 406 (623)
Q Consensus 364 ~~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~---~--~~---l~~~~~~~--------- 406 (623)
+.. ....+..+++++|++|..+.. .++..... . .. ..|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 112356789999998865421 12211110 0 00 12332111
Q ss_pred ---HHHHHHHHHHHHHhC----CCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 407 ---IALGTARGLLYLHEQ----CDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 407 ---i~~~ia~~L~~LH~~----~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
+...+.+.+++++.. ...+++|+|+.+.||+++++..+.|+||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455666532 23479999999999999987556899999875
No 428
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.22 E-value=0.0016 Score=65.98 Aligned_cols=142 Identities=15% Similarity=0.039 Sum_probs=72.6
Q ss_pred CceeccCCeE-EEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCC--ceeeeeeeeecCCceEEEEecccCC
Q 006968 307 NILGRGGFGI-VYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHR--NLLRLCGFCSTENERLLVYPYMPNG 383 (623)
Q Consensus 307 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~--niv~l~~~~~~~~~~~lv~e~~~~g 383 (623)
+.|+.|.... +|+....+|..+++|...... ...+..|+.++..+... .+.+++.+.... -+++||++.+.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~----~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~ 97 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE----GGDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDA 97 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT----TCCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC----CccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCc
Confidence 4465555444 667765446777777654321 02345566666655322 244556554333 37899999776
Q ss_pred Chhhhhhhcc---------------------C-CCCCCCHHHHH-------H-------------HHHHHHHHHHHHH--
Q 006968 384 SVASRLRDHI---------------------H-GRPALDWARRK-------R-------------IALGTARGLLYLH-- 419 (623)
Q Consensus 384 sL~~~l~~~~---------------------~-~~~~l~~~~~~-------~-------------i~~~ia~~L~~LH-- 419 (623)
.+.+++.... . ....++..... . ....+...+..+.
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 6654432110 0 01112221100 0 0011122223331
Q ss_pred -hCCCCCeEecCCCCCCeEECCC----CcEEEeecccccc
Q 006968 420 -EQCDPKIIHRDVKAANILLDED----FEAVVGDFGLAKL 454 (623)
Q Consensus 420 -~~~~~~ivH~Dlk~~NIll~~~----~~~kl~Dfgla~~ 454 (623)
....+.++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1124489999999999999875 6789999998865
No 429
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.13 E-value=0.0011 Score=69.79 Aligned_cols=72 Identities=18% Similarity=0.223 Sum_probs=48.7
Q ss_pred CceeccCCeEEEEEEeCC--------CcEEEEEEecccccccchHHHHHHHHHHhhcCCCce-eeeeeeeecCCceEEEE
Q 006968 307 NILGRGGFGIVYKGCFSD--------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL-LRLCGFCSTENERLLVY 377 (623)
Q Consensus 307 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~ 377 (623)
+.|+.|....||+....+ +..+.+|+.... .....+..|..++..+...++ .++++.+.. .+|+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 567788889999998753 578999988432 111456678888887753344 456665532 3899
Q ss_pred ecccCCCh
Q 006968 378 PYMPNGSV 385 (623)
Q Consensus 378 e~~~~gsL 385 (623)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986443
No 430
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.09 E-value=0.0048 Score=62.18 Aligned_cols=159 Identities=16% Similarity=0.098 Sum_probs=89.1
Q ss_pred cCHHHHHHHhcCCCc-----CCceeccCCeEEEEEEeCCCcEEEEEEecccccccchHHHHHHHHHHhhcCCCc--eeee
Q 006968 291 YTFKELRAATSNFSA-----KNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN--LLRL 363 (623)
Q Consensus 291 ~~~~~l~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l 363 (623)
.+.+++......|.. ...++ |....||+....+|+.+++|..+... .....+..|..++..+.... +.++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--~~~~~~~~E~~~~~~L~~~g~~vp~~ 87 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER--WTADQILEEHQFALQLVNDEVPVAAP 87 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT--SCHHHHHHHHHHHHHHHHTTCSBCCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHcCCeecce
Confidence 444555444444432 23466 88889999877778789999986332 12345677888777664222 3344
Q ss_pred eee-----eecCCceEEEEecccCCChhh-----------h---hhhccC-----CCCCCCHHHH----HHH--------
Q 006968 364 CGF-----CSTENERLLVYPYMPNGSVAS-----------R---LRDHIH-----GRPALDWARR----KRI-------- 407 (623)
Q Consensus 364 ~~~-----~~~~~~~~lv~e~~~~gsL~~-----------~---l~~~~~-----~~~~l~~~~~----~~i-------- 407 (623)
+.. ....+..+++|+|++|..+.. . ++.... .....++... ..+
T Consensus 88 ~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (328)
T 1zyl_A 88 VAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIP 167 (328)
T ss_dssp CCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSC
T ss_pred eecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCC
Confidence 433 112345678999998754321 0 121111 1112333221 001
Q ss_pred -------HHHHHHHHHHHHhC----CCCCeEecCCCCCCeEECCCCcEEEeecccccc
Q 006968 408 -------ALGTARGLLYLHEQ----CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (623)
Q Consensus 408 -------~~~ia~~L~~LH~~----~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~ 454 (623)
...+...++.+... ....++|||+++.||+++ + .+.|+||+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 168 SGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333321 234689999999999999 4 899999998754
No 431
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.03 E-value=0.0022 Score=66.07 Aligned_cols=142 Identities=14% Similarity=0.185 Sum_probs=82.6
Q ss_pred CceeccCCeEEEEEEeC--------CCcEEEEEEecccccccchHHHHHHHHHHhhcCCCce-eeeeeeeecCCceEEEE
Q 006968 307 NILGRGGFGIVYKGCFS--------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL-LRLCGFCSTENERLLVY 377 (623)
Q Consensus 307 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~ 377 (623)
+.+..|-...+|+.... ++..+.+|+.... ......+.+|..+++.+.-..+ .++++++.+ .+|+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 45666888899998864 2478999986321 2234456789998887742223 456666543 3999
Q ss_pred ecccCCChhhh-----------------hhhc-cCCCCCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 006968 378 PYMPNGSVASR-----------------LRDH-IHGRPALD--WARRKRIALGTAR-------------------GLLYL 418 (623)
Q Consensus 378 e~~~~gsL~~~-----------------l~~~-~~~~~~l~--~~~~~~i~~~ia~-------------------~L~~L 418 (623)
||++|.+|..- |+.. ........ |.++.++..++.. .+.+|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998654311 1111 00011222 4455555544321 23333
Q ss_pred H----hC-CCCCeEecCCCCCCeEECCC----CcEEEeecccccc
Q 006968 419 H----EQ-CDPKIIHRDVKAANILLDED----FEAVVGDFGLAKL 454 (623)
Q Consensus 419 H----~~-~~~~ivH~Dlk~~NIll~~~----~~~kl~Dfgla~~ 454 (623)
. .. ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 21 23468999999999999876 7899999998863
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.00 E-value=0.00074 Score=58.28 Aligned_cols=55 Identities=22% Similarity=0.245 Sum_probs=27.5
Q ss_pred eEEeecCCCC-CCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcccccc
Q 006968 102 SVLLQNNAIL-GPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSL 158 (623)
Q Consensus 102 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 158 (623)
.++.++++++ ..+|..+. .+|++|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5666666665 24454332 3456666666666632223344455555544444443
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.99 E-value=0.00083 Score=57.95 Aligned_cols=56 Identities=20% Similarity=0.270 Sum_probs=41.1
Q ss_pred EEeCCCCCcc-cccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCC
Q 006968 78 ALGLPSQSLS-GTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFT 135 (623)
Q Consensus 78 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 135 (623)
.++.++++|+ ..+|..+ -++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5667777776 3456443 246888888888888665667778888888888888775
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.87 E-value=0.00015 Score=67.12 Aligned_cols=92 Identities=14% Similarity=0.150 Sum_probs=70.0
Q ss_pred cCccccCCCCcceEEeecC-CCCC----CCCCccCCCCCccEEEecCCCCCC----CCCccccCCCCccchhccccccCC
Q 006968 90 LSPWIGNLTKLQSVLLQNN-AILG----PIPASLGKLEKLQTLDLSNNKFTG----EIPDSLGDLGNLNYLRLNNNSLTG 160 (623)
Q Consensus 90 ~~~~~~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~ 160 (623)
+...+.+-+.|++|+|++| +|.. .+-+.+..-+.|+.|+|++|+|.. .+...+..-+.|+.|+|++|.|..
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 4444566789999999986 7763 144566778899999999999984 334455567899999999999985
Q ss_pred ----CCCcccCCCCcccEEECCCCc
Q 006968 161 ----SCPESLSKIESLTLVDLSYNN 181 (623)
Q Consensus 161 ----~~p~~~~~l~~L~~L~l~~N~ 181 (623)
.+-..+..-+.|+.|+|++|.
T Consensus 113 ~Ga~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 113 ELLARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHHHHhhCCceeEEECCCCc
Confidence 244567777889999998764
No 435
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.79 E-value=0.0026 Score=65.49 Aligned_cols=73 Identities=7% Similarity=-0.013 Sum_probs=43.2
Q ss_pred CceeccCCeEEEEEEeCC---------CcEEEEEEecccccccchHHHHHHHHHHhhcCCCce-eeeeeeeecCCceEEE
Q 006968 307 NILGRGGFGIVYKGCFSD---------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL-LRLCGFCSTENERLLV 376 (623)
Q Consensus 307 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv 376 (623)
+.++.|....+|+....+ +..+++|+..... ........|.++++.+...++ .++++.. .-++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV--DELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG--GGTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc--cceecHHHHHHHHHHHHhcCCCCceEEec----CCcEE
Confidence 457778888999988754 2678888875421 111134678888877753333 3555543 23789
Q ss_pred EecccCCCh
Q 006968 377 YPYMPNGSV 385 (623)
Q Consensus 377 ~e~~~~gsL 385 (623)
|||++|..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987543
No 436
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.75 E-value=0.0076 Score=63.77 Aligned_cols=74 Identities=14% Similarity=0.096 Sum_probs=47.5
Q ss_pred CCceeccCCeEEEEEEeCC-CcEEEEEEecccccccchHHHHHHHHHHhhcCCCce-eeeeeeeecCCceEEEEecccCC
Q 006968 306 KNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL-LRLCGFCSTENERLLVYPYMPNG 383 (623)
Q Consensus 306 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~~~g 383 (623)
.+.|+.|-...+|+....+ +..+++|+..... .......+|..++..+...++ .++++.+. + .+|+||++|.
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~ 186 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGY 186 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C--CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCc
Confidence 3567888889999998765 4788899874321 111123578888888865555 36666662 2 3599999875
Q ss_pred Ch
Q 006968 384 SV 385 (623)
Q Consensus 384 sL 385 (623)
+|
T Consensus 187 ~l 188 (458)
T 2qg7_A 187 AL 188 (458)
T ss_dssp EC
T ss_pred cC
Confidence 44
No 437
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.47 E-value=0.02 Score=58.11 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=27.7
Q ss_pred CCeEecCCCCCCeEECCCCcEEEeecccccc
Q 006968 424 PKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (623)
Q Consensus 424 ~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~ 454 (623)
..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999988764
No 438
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.47 E-value=0.0057 Score=63.49 Aligned_cols=87 Identities=15% Similarity=0.177 Sum_probs=44.6
Q ss_pred ccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCc
Q 006968 92 PWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIES 171 (623)
Q Consensus 92 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 171 (623)
..|.++++|+.+.+. +.++..-..+|.++.+|+.++|.+| ++..-..+|.++++|+.+.|..+ ++..-..+|.++++
T Consensus 282 ~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~ 358 (394)
T 4gt6_A 282 GAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTA 358 (394)
T ss_dssp TTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTT
T ss_pred cccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCC
Confidence 344555555555554 2333233345555666666666543 44222345556666666666433 44222345666666
Q ss_pred ccEEECCCCc
Q 006968 172 LTLVDLSYNN 181 (623)
Q Consensus 172 L~~L~l~~N~ 181 (623)
|+.+++.+|.
T Consensus 359 L~~i~~~~~~ 368 (394)
T 4gt6_A 359 LNNIEYSGSR 368 (394)
T ss_dssp CCEEEESSCH
T ss_pred CCEEEECCce
Confidence 6666665543
No 439
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.26 E-value=0.048 Score=50.72 Aligned_cols=103 Identities=16% Similarity=0.072 Sum_probs=66.7
Q ss_pred CChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeecccccccCCCCCce
Q 006968 383 GSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV 462 (623)
Q Consensus 383 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 462 (623)
-||.+.|... +.++++.++|.++.|.+.+|.-+-.... . ..+=+.|..|++..+|.+.+.+ +.+.
T Consensus 33 vSL~eIL~~~---~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRLY---NQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHHc---CCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc---------
Confidence 3788888876 5689999999999999999887732111 1 1223356899999999998864 1110
Q ss_pred eeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCC
Q 006968 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRA 505 (623)
Q Consensus 463 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p 505 (623)
.....+.+||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0123466888753 3456778899999999987764444
No 440
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.21 E-value=0.0063 Score=62.71 Aligned_cols=102 Identities=14% Similarity=0.102 Sum_probs=56.1
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.+..+.+..+ +.......+.+++.|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.++++|+.+.+.
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 3444555433 33333445566666666666654 44333445666666666666543 442233455666666666666
Q ss_pred ccccCCCCCcccCCCCcccEEECCC
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSY 179 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~ 179 (623)
+|.++..-...|.++.+|+.+.|..
T Consensus 295 ~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCT
T ss_pred ccccceehhhhhcCCCCCCEEEcCc
Confidence 6666533344566666666666654
No 441
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.07 E-value=0.0056 Score=63.60 Aligned_cols=87 Identities=14% Similarity=0.054 Sum_probs=68.7
Q ss_pred CccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCC
Q 006968 91 SPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIE 170 (623)
Q Consensus 91 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 170 (623)
...|.++++|+.+.+.++ ++..-..+|.++++|+.++|.++ ++..-..+|.++++|+.++|..| ++..-..+|.+++
T Consensus 290 ~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 366 (394)
T 4fs7_A 290 EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCI 366 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCT
T ss_pred cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCC
Confidence 346778899999999866 66455678999999999999755 76344567899999999999877 6634456899999
Q ss_pred cccEEECCCC
Q 006968 171 SLTLVDLSYN 180 (623)
Q Consensus 171 ~L~~L~l~~N 180 (623)
+|+.+++..|
T Consensus 367 ~L~~i~lp~~ 376 (394)
T 4fs7_A 367 NLKKVELPKR 376 (394)
T ss_dssp TCCEEEEEGG
T ss_pred CCCEEEECCC
Confidence 9999998754
No 442
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.04 E-value=0.0061 Score=63.29 Aligned_cols=103 Identities=10% Similarity=0.155 Sum_probs=70.2
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.+.++ ++++..-...|.++++|+.++|..| ++..-..+|.+|.+|+.+.|..+ ++..-..+|.++++|+.+++.
T Consensus 289 ~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~ 365 (394)
T 4gt6_A 289 ALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYS 365 (394)
T ss_dssp TCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEES
T ss_pred ccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEEC
Confidence 45566664 4455445567889999999999865 66455678999999999999765 773445679999999999999
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCc
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLS 183 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 183 (623)
+|.... ..+..+.+|+.+.+..|.+.
T Consensus 366 ~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 366 GSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp SCHHHH---HTCBCCCCC-----------
T ss_pred Cceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 987542 46778889999988877654
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.75 E-value=0.04 Score=56.95 Aligned_cols=144 Identities=14% Similarity=0.164 Sum_probs=81.6
Q ss_pred CceeccCCeEEEEEEeCC--------CcEEEEEEeccccc-----------ccc------hHHHHHHHHHHhhcCCCc-e
Q 006968 307 NILGRGGFGIVYKGCFSD--------GALVAVKRLKDYNI-----------AGG------EVQFQTEVETISLAVHRN-L 360 (623)
Q Consensus 307 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~-----------~~~------~~~~~~e~~~l~~l~H~n-i 360 (623)
+.|..|-...+|+....+ +..|.+++.-.... .+. ......|..+++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456567778999988753 36788888643211 000 112335888888775333 4
Q ss_pred eeeeeeeecCCceEEEEecccCCChhhh--------------h---hhc-cCCCCCCC--HHHHHHHHHHHH--------
Q 006968 361 LRLCGFCSTENERLLVYPYMPNGSVASR--------------L---RDH-IHGRPALD--WARRKRIALGTA-------- 412 (623)
Q Consensus 361 v~l~~~~~~~~~~~lv~e~~~~gsL~~~--------------l---~~~-~~~~~~l~--~~~~~~i~~~ia-------- 412 (623)
.++++++.. .+|+||+++-+|..- | +.. ........ |..+.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 466776642 289999987544211 1 110 01111223 334444443321
Q ss_pred --------------HHHH----HHHhC-CCCCeEecCCCCCCeEECCC------CcEEEeecccccc
Q 006968 413 --------------RGLL----YLHEQ-CDPKIIHRDVKAANILLDED------FEAVVGDFGLAKL 454 (623)
Q Consensus 413 --------------~~L~----~LH~~-~~~~ivH~Dlk~~NIll~~~------~~~kl~Dfgla~~ 454 (623)
.-+. +|... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 23222 23468999999999999876 7899999998753
No 444
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.51 E-value=0.013 Score=60.66 Aligned_cols=102 Identities=12% Similarity=0.104 Sum_probs=76.1
Q ss_pred cEEEEeCCCCCcccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhcc
Q 006968 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (623)
Q Consensus 75 ~v~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (623)
.++.+.+..+... .....|.++..|+.+.+..+.+. ...|..+.+|+.+.+.+| ++..-..+|.++++|+.++|.
T Consensus 254 ~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 254 DLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp SCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCC
T ss_pred cceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeC
Confidence 3555555554333 45567888899999998877654 246888999999999866 663445678999999999997
Q ss_pred ccccCCCCCcccCCCCcccEEECCCCcCc
Q 006968 155 NNSLTGSCPESLSKIESLTLVDLSYNNLS 183 (623)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 183 (623)
++ ++..-..+|.++++|+.+++..| ++
T Consensus 329 ~~-v~~I~~~aF~~c~~L~~i~lp~~-l~ 355 (394)
T 4fs7_A 329 YL-VEEIGKRSFRGCTSLSNINFPLS-LR 355 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CC
T ss_pred Cc-ccEEhHHhccCCCCCCEEEECcc-cc
Confidence 55 66344568999999999999876 55
No 445
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.96 E-value=0.053 Score=55.62 Aligned_cols=89 Identities=12% Similarity=0.041 Sum_probs=46.3
Q ss_pred ccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhccccccCCCCCcccCCCCc
Q 006968 92 PWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIES 171 (623)
Q Consensus 92 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 171 (623)
..+...++|+.+.+..+ +...-...|.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|..+++
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 34445556666665544 22233345556666666666554 44233344555666666666433 33222334556666
Q ss_pred ccEEECCCCcCc
Q 006968 172 LTLVDLSYNNLS 183 (623)
Q Consensus 172 L~~L~l~~N~l~ 183 (623)
|+.+.+.+|.++
T Consensus 288 L~~i~l~~~~i~ 299 (379)
T 4h09_A 288 LTKVVMDNSAIE 299 (379)
T ss_dssp CCEEEECCTTCC
T ss_pred cccccccccccc
Confidence 666666665555
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.29 E-value=0.12 Score=53.91 Aligned_cols=141 Identities=9% Similarity=0.075 Sum_probs=82.8
Q ss_pred CceeccCCeEEEEEEeCC--------CcEEEEEEecccccccchHHHHHHHHHHhhcCCCce-eeeeeeeecCCceEEEE
Q 006968 307 NILGRGGFGIVYKGCFSD--------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL-LRLCGFCSTENERLLVY 377 (623)
Q Consensus 307 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~ 377 (623)
+.+..|-...+|+....+ +..+++|+..... ....+..+|..+++.+.-.++ .++++.+. -++|+
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 456667888999998753 5789999864321 112234678888877743233 34555332 37899
Q ss_pred ecccCCChhhh-----------------hhhc-c-----C---CCCCCCHHHHHHHHHHH-------------------H
Q 006968 378 PYMPNGSVASR-----------------LRDH-I-----H---GRPALDWARRKRIALGT-------------------A 412 (623)
Q Consensus 378 e~~~~gsL~~~-----------------l~~~-~-----~---~~~~l~~~~~~~i~~~i-------------------a 412 (623)
||++|.+|..- |+.. . . ...+--|.++.++..++ .
T Consensus 150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 229 (424)
T 3mes_A 150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL 229 (424)
T ss_dssp ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence 99998654210 1110 0 1 11122244444443322 2
Q ss_pred HHHHHHHh---------------------CCCCCeEecCCCCCCeEECCCCcEEEeecccccc
Q 006968 413 RGLLYLHE---------------------QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (623)
Q Consensus 413 ~~L~~LH~---------------------~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~~ 454 (623)
..+.+|.. .....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 22333321 11236899999999999 7788999999998863
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.05 E-value=0.094 Score=54.39 Aligned_cols=30 Identities=30% Similarity=0.445 Sum_probs=25.2
Q ss_pred CeEecCCCCCCeEE------CCCCcEEEeecccccc
Q 006968 425 KIIHRDVKAANILL------DEDFEAVVGDFGLAKL 454 (623)
Q Consensus 425 ~ivH~Dlk~~NIll------~~~~~~kl~Dfgla~~ 454 (623)
.++|+|+.+.||++ +++..++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4566799999998863
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=89.81 E-value=0.14 Score=34.16 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=18.5
Q ss_pred ceeeeecchhhhHHHHHHHhhhhhheeecccc
Q 006968 238 RVAVALGASFGAAFFVIIVVGLLVWLRYRHNQ 269 (623)
Q Consensus 238 ~~~i~~~~~~g~~~~~~~~~~~l~~~~~r~~~ 269 (623)
...++.+++.|+++++++++..++++|+|+.+
T Consensus 10 ~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 10 IPSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred cceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 34466666666666666555555555555443
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=87.60 E-value=0.17 Score=33.67 Aligned_cols=31 Identities=23% Similarity=0.315 Sum_probs=17.4
Q ss_pred eeeeecchhhhHHHHHHHhhhhhheeecccc
Q 006968 239 VAVALGASFGAAFFVIIVVGLLVWLRYRHNQ 269 (623)
Q Consensus 239 ~~i~~~~~~g~~~~~~~~~~~l~~~~~r~~~ 269 (623)
..++.+++.|++++++++...++++|+|+.+
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 3456666666666665555555555555543
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=85.19 E-value=1.6 Score=40.39 Aligned_cols=116 Identities=11% Similarity=0.085 Sum_probs=78.6
Q ss_pred CCCceeeeeeeeecCCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCC
Q 006968 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAAN 435 (623)
Q Consensus 356 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlk~~N 435 (623)
.||+.+.. .+-.+++...+.|+.-+.+ .+|-. -...+...+++++..++....+++.. +|--++|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~--~~f~~-----ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNH--TPFDN-----IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTS--EEGGG-----GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCccc--CCHHH-----HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 58888765 4555566655656644322 22221 12478899999999999888777766 888999999
Q ss_pred eEECCCCcEEEeecccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCC
Q 006968 436 ILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507 (623)
Q Consensus 436 Ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~ 507 (623)
++++.++.+++.-.|+-..+. |. ..+...=.-.+=+++..+++++..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l~------------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVD------------------PL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTBS------------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCCC------------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999998777643322 11 11111123357788899999998875
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=84.35 E-value=0.12 Score=54.55 Aligned_cols=61 Identities=5% Similarity=-0.046 Sum_probs=17.6
Q ss_pred cCCceeccCCeEEEEEEeCC-CcEEEE------EEeccccccc-chHHHHHHHHHHhhcCCCceeeeeeeee
Q 006968 305 AKNILGRGGFGIVYKGCFSD-GALVAV------KRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCS 368 (623)
Q Consensus 305 ~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~ 368 (623)
+.+.|| ||.||+|.+.. ..+||| |..+...... ....|.+|..++...+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345676 99999999864 467899 7766533222 2346888999999999999999887653
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=83.76 E-value=2.7 Score=38.97 Aligned_cols=115 Identities=16% Similarity=0.150 Sum_probs=76.4
Q ss_pred CCCceeeeeeeeecCCceEEEEecccCCChhhhhhhccCCCCCCCHHHHHHHHHHHHHHHH-HHHhCCCCCeEecCCCCC
Q 006968 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL-YLHEQCDPKIIHRDVKAA 434 (623)
Q Consensus 356 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~-~LH~~~~~~ivH~Dlk~~ 434 (623)
.||.+ -...-.+++...+.|+.-+++.=...++ ..+...+++++.+++.... +++.. +|--++|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-------~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-------KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-------TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-------hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 47777 3344456667777677554442222232 4788899999999988776 66654 88899999
Q ss_pred CeEECCCCcEEEeecccccccCCCCCceeeccccccccccccccccCCCCCccchhhHHHHHHHHHhCCCCCC
Q 006968 435 NILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507 (623)
Q Consensus 435 NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGvil~elltg~~p~~ 507 (623)
||++|.++.+++.-.|+-..+ +|.-+ +..-=.-.+=+++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l------------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL------------------PPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB------------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcccC------------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999877764332 22211 111113357788888889888775
No 453
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=81.30 E-value=0.51 Score=31.31 Aligned_cols=28 Identities=18% Similarity=0.341 Sum_probs=15.1
Q ss_pred eecchhhhHHHHHHHhhhhhheeecccc
Q 006968 242 ALGASFGAAFFVIIVVGLLVWLRYRHNQ 269 (623)
Q Consensus 242 ~~~~~~g~~~~~~~~~~~l~~~~~r~~~ 269 (623)
+.+.++|+++++++.+.+.+|+|||+.+
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhhhh
Confidence 4445555555555555555666655543
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=59.53 E-value=3.2 Score=26.63 Aligned_cols=15 Identities=13% Similarity=0.262 Sum_probs=7.0
Q ss_pred eecchhhhHHHHHHH
Q 006968 242 ALGASFGAAFFVIIV 256 (623)
Q Consensus 242 ~~~~~~g~~~~~~~~ 256 (623)
+.++++|.++.+.++
T Consensus 13 IAGiVvG~v~gv~li 27 (38)
T 2k1k_A 13 IVAVIFGLLLGAALL 27 (38)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred eeeeehHHHHHHHHH
Confidence 445555554443333
No 455
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=57.92 E-value=3.1 Score=27.14 Aligned_cols=14 Identities=29% Similarity=0.503 Sum_probs=6.4
Q ss_pred eeeecchhhhHHHH
Q 006968 240 AVALGASFGAAFFV 253 (623)
Q Consensus 240 ~i~~~~~~g~~~~~ 253 (623)
.++.+++.|.++++
T Consensus 14 ~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 14 AVIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred EEEeehhHHHHHHH
Confidence 34444455544433
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=50.59 E-value=1.3e+02 Score=32.24 Aligned_cols=47 Identities=19% Similarity=0.115 Sum_probs=36.0
Q ss_pred CHHHHHHHHHHHH--HHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 400 DWARRKRIALGTA--RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 400 ~~~~~~~i~~~ia--~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
.|..+..++..+| ..+.|+=.. +|=+++|||++.+|++.=+|||.+-
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cHHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 4666777777665 345566544 6778999999999999999999874
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=45.88 E-value=35 Score=27.03 Aligned_cols=45 Identities=18% Similarity=0.134 Sum_probs=22.6
Q ss_pred cccccCccccCCCCcceEEeecCCCCCCCCCccCCCCCccEEEecC
Q 006968 86 LSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSN 131 (623)
Q Consensus 86 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 131 (623)
++..-...|.++++|+.+.|..+ ++..-..+|.+|.+|+.+.|..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33333445555566666655543 2323334555555555555543
No 458
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=41.41 E-value=5.1 Score=25.05 Aligned_cols=21 Identities=29% Similarity=0.539 Sum_probs=9.7
Q ss_pred hhhhHHHHHHHhhhhhheeec
Q 006968 246 SFGAAFFVIIVVGLLVWLRYR 266 (623)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~~r 266 (623)
++|.++++++..++.+++|||
T Consensus 14 Vvglll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 14 VVGVLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHHHHTTTTTHHHHHC
T ss_pred HHHHHHHHHHHHHhheEEeec
Confidence 444444444444444555444
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=38.51 E-value=60 Score=25.59 Aligned_cols=46 Identities=11% Similarity=0.085 Sum_probs=26.7
Q ss_pred CCCCCCCCccCCCCCccEEEecCCCCCCCCCccccCCCCccchhccc
Q 006968 109 AILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNN 155 (623)
Q Consensus 109 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 155 (623)
.++..--.+|.++++|+.+.|..+ ++..-...|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344334456777777777776654 3323345566666666666654
No 460
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=31.69 E-value=99 Score=33.87 Aligned_cols=45 Identities=22% Similarity=0.152 Sum_probs=33.8
Q ss_pred HHHHHHHHHHH--HHHHHHHhCCCCCeEecCCCCCCeEECCCCcEEEeeccccc
Q 006968 402 ARRKRIALGTA--RGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (623)
Q Consensus 402 ~~~~~i~~~ia--~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Dfgla~ 453 (623)
..+..++.++| ..+.|+=.. +|=+++|||++.+|.+.-+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 45566666655 344555543 7889999999999999999999874
No 461
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=26.08 E-value=16 Score=19.48 Aligned_cols=9 Identities=44% Similarity=1.191 Sum_probs=6.9
Q ss_pred CCCCcceee
Q 006968 61 DPCSWRMIT 69 (623)
Q Consensus 61 ~~c~w~gv~ 69 (623)
..|+|+|+.
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 359999974
Done!