Query 006969
Match_columns 623
No_of_seqs 308 out of 2145
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 13:44:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006969.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006969hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hq1_A 2-isopropylmalate synth 100.0 3E-117 9E-122 993.3 52.6 511 78-604 70-643 (644)
2 3rmj_A 2-isopropylmalate synth 100.0 1.1E-94 3.9E-99 774.6 33.5 361 76-451 9-370 (370)
3 3ivs_A Homocitrate synthase, m 100.0 6.9E-94 2.4E-98 776.5 29.2 384 65-474 22-409 (423)
4 2ztj_A Homocitrate synthase; ( 100.0 1E-87 3.5E-92 725.2 29.3 370 78-474 2-375 (382)
5 3eeg_A 2-isopropylmalate synth 100.0 1.5E-80 5.2E-85 655.7 25.2 315 77-403 4-318 (325)
6 3ble_A Citramalate synthase fr 100.0 4.3E-77 1.5E-81 632.8 33.2 316 77-410 17-337 (337)
7 3ewb_X 2-isopropylmalate synth 100.0 3E-67 1E-71 547.1 31.4 284 77-372 3-286 (293)
8 1ydo_A HMG-COA lyase; TIM-barr 100.0 1.1E-60 3.7E-65 500.8 25.2 281 77-382 4-302 (307)
9 2cw6_A Hydroxymethylglutaryl-C 100.0 2.5E-58 8.4E-63 481.4 27.0 276 77-377 3-296 (298)
10 2ftp_A Hydroxymethylglutaryl-C 100.0 3.7E-58 1.3E-62 480.9 27.7 276 76-376 5-298 (302)
11 1rqb_A Transcarboxylase 5S sub 100.0 1.2E-56 4.2E-61 497.9 28.1 279 73-383 18-317 (539)
12 1ydn_A Hydroxymethylglutaryl-C 100.0 3.2E-55 1.1E-59 457.1 28.6 270 77-371 2-289 (295)
13 2nx9_A Oxaloacetate decarboxyl 100.0 1.5E-55 5E-60 483.3 27.1 311 76-458 4-337 (464)
14 1nvm_A HOA, 4-hydroxy-2-oxoval 100.0 5.7E-54 2E-58 457.0 26.5 277 76-391 5-295 (345)
15 3bg3_A Pyruvate carboxylase, m 100.0 5.2E-53 1.8E-57 483.3 20.7 313 74-456 97-444 (718)
16 3dxi_A Putative aldolase; TIM 100.0 7.3E-51 2.5E-55 427.5 19.3 270 79-393 2-288 (320)
17 2qf7_A Pyruvate carboxylase pr 100.0 6.8E-49 2.3E-53 472.6 21.0 304 74-453 545-882 (1165)
18 3hbl_A Pyruvate carboxylase; T 100.0 8.5E-45 2.9E-49 436.3 24.4 260 72-368 525-816 (1150)
19 3f6g_B Alpha-isopropylmalate s 100.0 4E-28 1.4E-32 222.3 16.1 119 479-607 2-125 (127)
20 2ekc_A AQ_1548, tryptophan syn 98.8 4.9E-08 1.7E-12 99.6 14.7 178 97-310 27-231 (262)
21 3nav_A Tryptophan synthase alp 98.3 4.8E-06 1.6E-10 85.3 13.6 174 99-310 32-234 (271)
22 3vnd_A TSA, tryptophan synthas 98.1 1.4E-05 4.7E-10 81.7 12.2 174 98-310 29-232 (267)
23 1qop_A Tryptophan synthase alp 98.1 1.1E-05 3.7E-10 82.4 11.4 176 97-310 27-231 (268)
24 3t7v_A Methylornithine synthas 98.1 0.00038 1.3E-08 73.1 22.3 219 97-337 90-335 (350)
25 3f4w_A Putative hexulose 6 pho 97.9 5.8E-05 2E-09 73.5 10.4 175 97-310 9-184 (211)
26 1rd5_A Tryptophan synthase alp 97.6 0.00042 1.4E-08 70.0 12.4 169 98-312 29-229 (262)
27 3tha_A Tryptophan synthase alp 97.3 0.00048 1.6E-08 69.6 8.6 174 99-310 26-224 (252)
28 1r30_A Biotin synthase; SAM ra 97.2 0.035 1.2E-06 58.5 22.6 215 96-337 97-332 (369)
29 3ajx_A 3-hexulose-6-phosphate 96.9 0.021 7.3E-07 55.0 15.4 167 98-310 10-183 (207)
30 3iix_A Biotin synthetase, puta 96.8 0.045 1.5E-06 56.9 18.5 190 97-311 83-291 (348)
31 3tva_A Xylose isomerase domain 96.1 0.084 2.9E-06 52.9 14.4 197 106-338 26-252 (290)
32 1geq_A Tryptophan synthase alp 96.0 0.2 6.9E-06 49.5 16.4 168 97-311 15-218 (248)
33 3lye_A Oxaloacetate acetyl hyd 95.7 0.8 2.7E-05 47.3 19.8 226 107-357 38-286 (307)
34 3qxb_A Putative xylose isomera 95.6 0.17 5.8E-06 51.6 14.7 202 105-338 39-278 (316)
35 3ngf_A AP endonuclease, family 95.5 0.042 1.4E-06 54.7 9.3 188 98-337 23-239 (269)
36 3fa4_A 2,3-dimethylmalate lyas 95.5 0.59 2E-05 48.2 17.8 225 107-357 31-278 (302)
37 3lab_A Putative KDPG (2-keto-3 95.4 0.22 7.6E-06 49.0 13.6 155 98-308 22-182 (217)
38 2h9a_B CO dehydrogenase/acetyl 95.3 0.26 9E-06 51.0 14.9 141 80-258 51-211 (310)
39 2dqw_A Dihydropteroate synthas 95.3 0.67 2.3E-05 47.6 17.7 162 80-274 32-218 (294)
40 4e38_A Keto-hydroxyglutarate-a 95.3 0.14 4.8E-06 50.9 12.0 153 98-309 43-198 (232)
41 3lmz_A Putative sugar isomeras 95.1 0.7 2.4E-05 45.4 16.8 197 79-338 19-224 (257)
42 2qw5_A Xylose isomerase-like T 95.1 0.28 9.7E-06 50.4 14.4 189 105-338 35-274 (335)
43 1qtw_A Endonuclease IV; DNA re 95.1 1.3 4.4E-05 43.8 18.8 235 105-365 16-280 (285)
44 3oa3_A Aldolase; structural ge 95.1 1.5 5.2E-05 44.8 19.3 199 80-312 59-262 (288)
45 3kws_A Putative sugar isomeras 95.0 1.7 6E-05 43.1 19.7 208 78-338 26-255 (287)
46 3vni_A Xylose isomerase domain 95.0 0.17 5.7E-06 50.7 12.1 193 98-337 17-237 (294)
47 3tr9_A Dihydropteroate synthas 94.9 1.2 4.2E-05 46.1 18.3 198 80-312 31-273 (314)
48 3p6l_A Sugar phosphate isomera 94.9 0.56 1.9E-05 46.1 15.4 200 79-338 11-228 (262)
49 1h1y_A D-ribulose-5-phosphate 94.8 0.47 1.6E-05 46.5 14.3 165 103-310 21-198 (228)
50 2qul_A D-tagatose 3-epimerase; 94.7 0.2 6.7E-06 50.0 11.6 207 79-337 3-238 (290)
51 2yci_X 5-methyltetrahydrofolat 94.7 0.25 8.6E-06 50.2 12.4 180 81-290 15-208 (271)
52 3qc0_A Sugar isomerase; TIM ba 94.6 0.97 3.3E-05 44.3 16.3 214 79-338 6-241 (275)
53 3ngj_A Deoxyribose-phosphate a 94.5 1.9 6.4E-05 43.0 17.8 196 81-313 29-229 (239)
54 1wa3_A 2-keto-3-deoxy-6-phosph 94.4 2.4 8.2E-05 40.3 18.1 158 98-312 19-177 (205)
55 3cqj_A L-ribulose-5-phosphate 94.4 4.1 0.00014 40.5 20.6 209 77-338 16-255 (295)
56 2qjg_A Putative aldolase MJ040 94.2 1.5 5.1E-05 43.8 16.9 172 99-312 43-236 (273)
57 1h5y_A HISF; histidine biosynt 94.1 0.36 1.2E-05 47.1 11.8 214 82-336 8-247 (253)
58 2v82_A 2-dehydro-3-deoxy-6-pho 94.1 1.5 5.1E-05 42.1 15.9 159 98-312 16-175 (212)
59 1ub3_A Aldolase protein; schif 94.0 2 6.9E-05 42.2 16.7 185 95-313 13-205 (220)
60 1mxs_A KDPG aldolase; 2-keto-3 93.9 0.88 3E-05 44.8 14.1 153 99-310 36-192 (225)
61 3jr2_A Hexulose-6-phosphate sy 93.9 0.19 6.4E-06 49.0 9.1 165 98-310 16-191 (218)
62 1ujp_A Tryptophan synthase alp 93.9 0.2 6.8E-06 50.9 9.5 169 99-310 28-226 (271)
63 3tak_A DHDPS, dihydrodipicolin 93.8 6.1 0.00021 40.1 20.8 194 97-335 18-220 (291)
64 3qze_A DHDPS, dihydrodipicolin 93.8 5.5 0.00019 41.0 20.5 194 97-335 40-242 (314)
65 1k77_A EC1530, hypothetical pr 93.8 1.6 5.5E-05 42.5 15.8 189 98-337 15-232 (260)
66 2y5s_A DHPS, dihydropteroate s 93.7 1.8 6.1E-05 44.5 16.4 195 80-313 26-272 (294)
67 1w8s_A FBP aldolase, fructose- 93.7 2.2 7.7E-05 42.8 17.0 176 99-311 39-229 (263)
68 3obe_A Sugar phosphate isomera 93.7 0.34 1.2E-05 49.4 11.1 206 78-338 21-271 (305)
69 1vhc_A Putative KHG/KDPG aldol 93.7 1 3.5E-05 44.3 14.0 154 98-310 26-183 (224)
70 3txv_A Probable tagatose 6-pho 93.6 0.85 2.9E-05 49.4 14.2 197 97-312 28-288 (450)
71 3noy_A 4-hydroxy-3-methylbut-2 93.6 1.8 6.3E-05 45.4 16.2 127 98-226 43-185 (366)
72 2wqp_A Polysialic acid capsule 93.5 2.4 8.2E-05 44.5 17.2 179 97-314 31-237 (349)
73 3r12_A Deoxyribose-phosphate a 93.3 4.4 0.00015 40.8 18.1 197 80-313 44-245 (260)
74 3oa3_A Aldolase; structural ge 93.3 0.92 3.1E-05 46.4 13.2 102 229-334 121-226 (288)
75 1aj0_A DHPS, dihydropteroate s 93.2 6.9 0.00024 39.8 19.6 162 80-273 18-205 (282)
76 1vli_A Spore coat polysacchari 93.1 0.59 2E-05 49.8 11.9 138 108-275 128-279 (385)
77 2isw_A Putative fructose-1,6-b 92.9 6 0.0002 41.0 18.9 162 97-288 25-211 (323)
78 2yw3_A 4-hydroxy-2-oxoglutarat 92.9 0.57 2E-05 45.4 10.7 152 99-311 23-177 (207)
79 1vli_A Spore coat polysacchari 92.8 2 6.9E-05 45.7 15.5 98 208-314 149-249 (385)
80 1rpx_A Protein (ribulose-phosp 92.8 0.32 1.1E-05 47.6 8.7 169 102-313 24-207 (230)
81 2zvr_A Uncharacterized protein 92.8 4.7 0.00016 40.0 17.7 190 102-338 42-256 (290)
82 3flu_A DHDPS, dihydrodipicolin 92.7 9.6 0.00033 38.8 21.1 215 97-365 24-247 (297)
83 3q94_A Fructose-bisphosphate a 92.7 3.8 0.00013 41.9 16.8 191 90-311 19-234 (288)
84 2hk0_A D-psicose 3-epimerase; 92.6 2.1 7.3E-05 43.1 15.1 205 79-337 22-256 (309)
85 1wbh_A KHG/KDPG aldolase; lyas 92.6 1.3 4.4E-05 43.2 12.9 154 98-310 25-182 (214)
86 2x7v_A Probable endonuclease 4 92.6 6.4 0.00022 38.6 18.3 198 105-337 16-251 (287)
87 3m0z_A Putative aldolase; MCSG 92.5 0.86 3E-05 44.8 11.1 163 97-276 47-248 (249)
88 2vef_A Dihydropteroate synthas 92.5 4.3 0.00015 42.0 17.2 164 81-275 14-223 (314)
89 1tx2_A DHPS, dihydropteroate s 92.5 4.4 0.00015 41.6 17.1 198 80-312 43-275 (297)
90 1eye_A DHPS 1, dihydropteroate 92.4 9.3 0.00032 38.8 19.3 159 81-274 10-198 (280)
91 3qja_A IGPS, indole-3-glycerol 92.4 3 0.0001 42.2 15.5 164 102-310 73-239 (272)
92 3r12_A Deoxyribose-phosphate a 92.1 1.6 5.6E-05 43.9 13.0 100 231-334 108-211 (260)
93 1tv8_A MOAA, molybdenum cofact 91.9 3.1 0.00011 42.8 15.5 137 96-249 48-190 (340)
94 4hb7_A Dihydropteroate synthas 91.9 3.3 0.00011 41.9 15.0 163 80-274 10-191 (270)
95 3eb2_A Putative dihydrodipicol 91.9 8 0.00027 39.5 18.3 194 97-335 21-223 (300)
96 3si9_A DHDPS, dihydrodipicolin 91.8 6.7 0.00023 40.4 17.8 195 97-335 39-242 (315)
97 3aal_A Probable endonuclease 4 91.8 2.8 9.7E-05 42.1 14.8 197 105-337 22-254 (303)
98 2e6f_A Dihydroorotate dehydrog 91.7 2.3 7.9E-05 43.4 14.1 138 160-312 103-272 (314)
99 3dx5_A Uncharacterized protein 91.7 0.33 1.1E-05 48.3 7.5 213 98-336 15-246 (286)
100 3l21_A DHDPS, dihydrodipicolin 91.6 0.82 2.8E-05 47.1 10.5 106 224-335 25-135 (304)
101 3daq_A DHDPS, dihydrodipicolin 91.5 10 0.00035 38.4 18.7 195 97-335 19-222 (292)
102 3na8_A Putative dihydrodipicol 91.4 6.1 0.00021 40.7 16.9 194 97-334 41-243 (315)
103 1gvf_A Tagatose-bisphosphate a 91.3 8.2 0.00028 39.3 17.4 179 97-310 25-229 (286)
104 1xky_A Dihydrodipicolinate syn 91.2 14 0.00048 37.6 19.4 193 97-334 29-230 (301)
105 3m5v_A DHDPS, dihydrodipicolin 91.2 14 0.00049 37.5 20.6 194 97-335 24-227 (301)
106 1vr6_A Phospho-2-dehydro-3-deo 91.2 0.45 1.6E-05 50.1 8.1 112 152-275 215-341 (350)
107 1zco_A 2-dehydro-3-deoxyphosph 91.2 1.5 5.2E-05 44.2 11.7 111 152-275 132-258 (262)
108 3ndo_A Deoxyribose-phosphate a 91.1 5.6 0.00019 39.3 15.5 194 82-313 16-219 (231)
109 2vc6_A MOSA, dihydrodipicolina 91.0 12 0.00041 37.9 18.5 194 97-334 17-219 (292)
110 1yx1_A Hypothetical protein PA 90.9 0.45 1.5E-05 47.0 7.5 189 105-335 27-223 (264)
111 3tak_A DHDPS, dihydrodipicolin 90.9 0.92 3.2E-05 46.3 10.0 106 224-335 11-121 (291)
112 3eoo_A Methylisocitrate lyase; 90.9 3.3 0.00011 42.5 14.1 108 197-310 66-188 (298)
113 3flu_A DHDPS, dihydrodipicolin 90.6 1.1 3.7E-05 45.9 10.3 106 224-335 17-127 (297)
114 1n7k_A Deoxyribose-phosphate a 90.6 14 0.00049 36.4 18.2 180 96-312 31-220 (234)
115 2wkj_A N-acetylneuraminate lya 90.6 1.2 4E-05 45.9 10.4 105 224-334 21-130 (303)
116 3bdk_A D-mannonate dehydratase 90.5 1.4 4.9E-05 46.9 11.4 17 321-337 306-322 (386)
117 3d0c_A Dihydrodipicolinate syn 90.5 7.4 0.00025 40.0 16.5 193 97-334 29-228 (314)
118 1bxb_A Xylose isomerase; xylos 90.4 2.1 7.2E-05 45.1 12.6 177 98-293 33-250 (387)
119 2wqp_A Polysialic acid capsule 90.3 1.4 4.9E-05 46.2 10.9 148 97-274 87-266 (349)
120 3s5o_A 4-hydroxy-2-oxoglutarat 90.3 18 0.0006 37.0 19.4 197 97-335 31-236 (307)
121 1xky_A Dihydrodipicolinate syn 90.2 1.2 4.2E-05 45.6 10.3 106 224-335 22-132 (301)
122 2v9d_A YAGE; dihydrodipicolini 90.2 19 0.00066 37.4 23.3 198 97-335 48-254 (343)
123 2ze3_A DFA0005; organic waste 90.2 3.2 0.00011 42.1 13.1 75 197-275 59-138 (275)
124 3glc_A Aldolase LSRF; TIM barr 90.1 5.5 0.00019 40.8 14.9 122 165-311 131-255 (295)
125 3a5f_A Dihydrodipicolinate syn 90.1 1.2 4.2E-05 45.4 10.0 98 231-334 19-120 (291)
126 2r8w_A AGR_C_1641P; APC7498, d 90.0 1.3 4.5E-05 46.1 10.4 106 224-335 44-154 (332)
127 1jub_A Dihydroorotate dehydrog 90.0 3.7 0.00013 41.8 13.7 139 160-312 103-270 (311)
128 1qwg_A PSL synthase;, (2R)-pho 90.0 1 3.6E-05 45.0 9.1 153 98-271 23-196 (251)
129 1to3_A Putative aldolase YIHT; 90.0 6.4 0.00022 40.4 15.4 134 163-312 112-253 (304)
130 3qfe_A Putative dihydrodipicol 89.9 17 0.0006 37.3 18.8 197 97-335 28-235 (318)
131 1rvg_A Fructose-1,6-bisphospha 89.9 15 0.00052 37.7 18.0 162 97-290 24-211 (305)
132 3e96_A Dihydrodipicolinate syn 89.9 1.2 4.1E-05 46.1 9.9 107 223-335 20-131 (316)
133 1xg4_A Probable methylisocitra 89.8 2.7 9.3E-05 43.1 12.4 109 197-310 61-184 (295)
134 1tqj_A Ribulose-phosphate 3-ep 89.8 1.4 4.6E-05 43.4 9.8 185 102-335 18-219 (230)
135 2fli_A Ribulose-phosphate 3-ep 89.8 1.5 5.2E-05 42.1 10.0 172 100-313 15-198 (220)
136 3fkr_A L-2-keto-3-deoxyarabona 89.8 1.1 3.8E-05 46.1 9.5 109 224-335 18-131 (309)
137 2ehh_A DHDPS, dihydrodipicolin 89.7 19 0.00064 36.5 20.6 194 97-334 17-219 (294)
138 3b4u_A Dihydrodipicolinate syn 89.6 1.7 5.9E-05 44.3 10.8 106 224-334 13-123 (294)
139 2qiw_A PEP phosphonomutase; st 89.5 2.5 8.4E-05 42.5 11.6 107 196-310 62-185 (255)
140 1rd5_A Tryptophan synthase alp 89.5 4.9 0.00017 39.8 13.9 114 208-337 7-143 (262)
141 3q58_A N-acetylmannosamine-6-p 89.5 16 0.00056 35.7 17.4 160 99-312 34-209 (229)
142 3daq_A DHDPS, dihydrodipicolin 89.4 1.3 4.6E-05 45.1 9.8 100 230-335 19-122 (292)
143 2q02_A Putative cytoplasmic pr 89.4 5.3 0.00018 38.9 13.9 201 98-338 19-238 (272)
144 3nvt_A 3-deoxy-D-arabino-heptu 89.4 4.5 0.00015 43.0 14.0 179 99-313 154-348 (385)
145 4dpp_A DHDPS 2, dihydrodipicol 89.4 1.6 5.5E-05 46.1 10.5 116 214-335 59-179 (360)
146 3m6y_A 4-hydroxy-2-oxoglutarat 89.3 1.1 3.8E-05 44.5 8.5 163 97-276 69-271 (275)
147 1eye_A DHPS 1, dihydropteroate 89.3 1.2 4E-05 45.5 9.1 82 227-315 21-109 (280)
148 2vp8_A Dihydropteroate synthas 89.2 7.7 0.00026 40.2 15.3 161 80-274 45-238 (318)
149 3cpr_A Dihydrodipicolinate syn 89.2 1.8 6.2E-05 44.4 10.6 106 224-335 26-136 (304)
150 1vzw_A Phosphoribosyl isomeras 89.2 1.5 5E-05 43.0 9.5 169 102-310 33-219 (244)
151 3ih1_A Methylisocitrate lyase; 89.2 6.6 0.00023 40.4 14.7 106 197-310 72-192 (305)
152 2yxg_A DHDPS, dihydrodipicolin 89.1 1.6 5.5E-05 44.4 10.1 100 229-334 16-119 (289)
153 1vr6_A Phospho-2-dehydro-3-deo 89.1 9.2 0.00032 40.1 16.0 178 98-315 117-314 (350)
154 1zlp_A PSR132, petal death pro 89.1 2.9 9.9E-05 43.3 12.0 130 173-310 56-206 (318)
155 2ehh_A DHDPS, dihydrodipicolin 89.0 1.5 5.3E-05 44.7 9.9 100 229-334 16-119 (294)
156 3sz8_A 2-dehydro-3-deoxyphosph 89.0 1.9 6.4E-05 44.1 10.3 126 129-275 123-272 (285)
157 3qfe_A Putative dihydrodipicol 88.9 1.2 4.2E-05 46.1 9.1 103 228-334 26-132 (318)
158 1f6k_A N-acetylneuraminate lya 88.9 1.9 6.6E-05 43.9 10.5 105 224-334 13-123 (293)
159 3a5f_A Dihydrodipicolinate syn 88.9 15 0.00053 37.1 17.2 192 98-334 19-219 (291)
160 3igs_A N-acetylmannosamine-6-p 88.8 19 0.00064 35.3 17.6 159 99-312 34-209 (232)
161 3s5o_A 4-hydroxy-2-oxoglutarat 88.7 1.8 6.3E-05 44.4 10.3 108 224-335 24-136 (307)
162 1zco_A 2-dehydro-3-deoxyphosph 88.7 6.5 0.00022 39.5 14.1 176 97-314 33-230 (262)
163 1o5k_A DHDPS, dihydrodipicolin 88.7 23 0.00078 36.1 20.3 197 98-335 30-235 (306)
164 3dz1_A Dihydrodipicolinate syn 88.6 2.3 7.9E-05 43.8 11.0 104 224-335 18-126 (313)
165 2ojp_A DHDPS, dihydrodipicolin 88.6 1.1 3.8E-05 45.7 8.4 102 228-335 16-121 (292)
166 3aam_A Endonuclease IV, endoiv 88.6 4.1 0.00014 39.9 12.5 191 104-337 17-239 (270)
167 3qze_A DHDPS, dihydrodipicolin 88.6 1.7 5.9E-05 44.9 9.9 106 224-335 33-143 (314)
168 1vcv_A Probable deoxyribose-ph 88.6 20 0.00067 35.2 18.7 188 96-313 12-220 (226)
169 3si9_A DHDPS, dihydrodipicolin 88.6 1.6 5.4E-05 45.2 9.7 105 224-334 32-141 (315)
170 1o5k_A DHDPS, dihydrodipicolin 88.4 1.7 5.9E-05 44.6 9.8 106 224-335 23-132 (306)
171 2hjp_A Phosphonopyruvate hydro 88.4 4.4 0.00015 41.4 12.7 108 197-310 58-183 (290)
172 2vc6_A MOSA, dihydrodipicolina 88.2 1.5 5E-05 44.8 9.1 100 229-334 16-119 (292)
173 3d0c_A Dihydrodipicolinate syn 88.2 2 6.9E-05 44.3 10.2 105 224-334 21-130 (314)
174 3g8r_A Probable spore coat pol 88.1 5 0.00017 42.1 13.1 141 107-275 104-255 (350)
175 2rfg_A Dihydrodipicolinate syn 88.0 1.6 5.5E-05 44.7 9.2 101 229-335 16-120 (297)
176 3gr7_A NADPH dehydrogenase; fl 87.9 4.6 0.00016 42.1 12.8 132 172-310 153-304 (340)
177 1aj0_A DHPS, dihydropteroate s 87.9 1.9 6.5E-05 44.0 9.5 79 227-314 30-118 (282)
178 1i60_A IOLI protein; beta barr 87.9 5.7 0.0002 38.6 13.0 197 98-337 14-238 (278)
179 1tz9_A Mannonate dehydratase; 87.9 27 0.00093 36.1 19.7 114 200-337 194-319 (367)
180 2ojp_A DHDPS, dihydrodipicolin 87.7 25 0.00086 35.5 19.1 194 97-335 18-220 (292)
181 2vp8_A Dihydropteroate synthas 87.7 1.6 5.5E-05 45.3 8.9 81 227-315 57-146 (318)
182 3gg8_A Pyruvate kinase; malari 87.5 17 0.00058 40.0 17.3 159 97-275 204-369 (511)
183 3o1n_A 3-dehydroquinate dehydr 87.4 26 0.00089 35.3 20.8 224 79-335 27-272 (276)
184 3h5d_A DHDPS, dihydrodipicolin 87.3 1.8 6.3E-05 44.6 9.2 106 224-335 17-128 (311)
185 3na8_A Putative dihydrodipicol 87.2 2.1 7.1E-05 44.3 9.5 106 224-335 34-144 (315)
186 2r8w_A AGR_C_1641P; APC7498, d 87.2 24 0.00081 36.5 17.7 195 97-334 51-256 (332)
187 1vyr_A Pentaerythritol tetrani 87.1 5.8 0.0002 41.7 13.1 129 171-310 169-320 (364)
188 3l21_A DHDPS, dihydrodipicolin 87.0 28 0.00097 35.4 19.7 191 97-334 32-231 (304)
189 3nvt_A 3-deoxy-D-arabino-heptu 87.0 1.5 5E-05 46.8 8.4 155 98-276 190-378 (385)
190 1vs1_A 3-deoxy-7-phosphoheptul 86.9 2.2 7.5E-05 43.4 9.3 155 100-275 88-273 (276)
191 1tx2_A DHPS, dihydropteroate s 86.9 1.8 6.2E-05 44.4 8.8 77 227-312 55-141 (297)
192 4h3d_A 3-dehydroquinate dehydr 86.6 27 0.00094 34.7 18.3 225 78-335 6-252 (258)
193 3eb2_A Putative dihydrodipicol 86.6 1.6 5.6E-05 44.7 8.3 106 224-335 14-124 (300)
194 3ovp_A Ribulose-phosphate 3-ep 86.5 5.5 0.00019 39.1 11.8 161 104-310 20-194 (228)
195 3h5d_A DHDPS, dihydrodipicolin 86.5 20 0.0007 36.6 16.6 193 97-335 24-226 (311)
196 3ctl_A D-allulose-6-phosphate 86.4 2.9 0.0001 41.2 9.8 160 106-310 18-192 (231)
197 2p10_A MLL9387 protein; putati 86.4 6.4 0.00022 40.1 12.3 155 131-310 79-256 (286)
198 2gou_A Oxidoreductase, FMN-bin 86.4 5.4 0.00018 41.9 12.4 130 171-311 169-320 (365)
199 2a4a_A Deoxyribose-phosphate a 86.2 14 0.00049 37.5 14.8 218 81-327 34-273 (281)
200 2ze3_A DFA0005; organic waste 86.1 15 0.00051 37.2 15.0 201 107-336 29-253 (275)
201 1o60_A 2-dehydro-3-deoxyphosph 86.0 2.7 9.1E-05 43.1 9.5 141 129-290 121-290 (292)
202 3m5v_A DHDPS, dihydrodipicolin 86.0 3.2 0.00011 42.5 10.2 103 228-335 22-128 (301)
203 3tdn_A FLR symmetric alpha-bet 86.0 1.1 3.8E-05 44.2 6.4 68 102-182 36-107 (247)
204 3m47_A Orotidine 5'-phosphate 86.0 5.1 0.00017 39.3 11.2 169 99-310 23-199 (228)
205 2qkf_A 3-deoxy-D-manno-octulos 85.9 2.9 9.8E-05 42.6 9.6 126 129-274 118-266 (280)
206 3fs2_A 2-dehydro-3-deoxyphosph 85.9 1.7 5.8E-05 44.7 7.8 125 129-275 144-291 (298)
207 1xim_A D-xylose isomerase; iso 85.8 2.5 8.4E-05 44.7 9.5 174 98-292 33-249 (393)
208 1xi3_A Thiamine phosphate pyro 85.8 10 0.00036 35.7 13.1 158 102-313 27-190 (215)
209 3b8i_A PA4872 oxaloacetate dec 85.7 7.5 0.00025 39.7 12.6 108 197-310 65-185 (287)
210 1p1x_A Deoxyribose-phosphate a 85.7 14 0.00049 37.0 14.5 161 96-275 23-193 (260)
211 3vnd_A TSA, tryptophan synthas 85.6 9.4 0.00032 38.4 13.2 98 165-275 34-147 (267)
212 1s2w_A Phosphoenolpyruvate pho 85.5 13 0.00044 38.0 14.3 205 107-337 32-260 (295)
213 2r14_A Morphinone reductase; H 85.5 3.9 0.00013 43.3 10.7 131 172-310 175-325 (377)
214 2y88_A Phosphoribosyl isomeras 85.4 1.9 6.4E-05 42.1 7.8 170 102-310 32-222 (244)
215 3ayv_A Putative uncharacterize 85.3 1.8 6.1E-05 42.2 7.6 133 102-243 11-153 (254)
216 1ka9_F Imidazole glycerol phos 85.3 7 0.00024 38.1 11.9 194 101-335 31-244 (252)
217 1oy0_A Ketopantoate hydroxymet 85.2 8.4 0.00029 39.2 12.5 139 104-277 44-214 (281)
218 3hgj_A Chromate reductase; TIM 85.1 12 0.00041 38.9 14.2 133 171-310 160-315 (349)
219 2qiw_A PEP phosphonomutase; st 85.1 7 0.00024 39.1 11.9 147 106-271 32-202 (255)
220 2v9d_A YAGE; dihydrodipicolini 85.0 3.1 0.00011 43.5 9.6 106 223-334 40-150 (343)
221 3q58_A N-acetylmannosamine-6-p 85.0 3.4 0.00012 40.6 9.4 67 240-317 94-160 (229)
222 1z41_A YQJM, probable NADH-dep 85.0 12 0.00041 38.7 14.0 136 168-311 149-305 (338)
223 3tsm_A IGPS, indole-3-glycerol 85.0 13 0.00046 37.5 13.9 157 103-310 81-246 (272)
224 3l6u_A ABC-type sugar transpor 84.9 5.1 0.00017 39.2 10.8 199 97-318 21-228 (293)
225 3n9r_A Fructose-bisphosphate a 84.8 9.3 0.00032 39.3 12.8 188 97-310 24-252 (307)
226 2yxg_A DHDPS, dihydrodipicolin 84.6 36 0.0012 34.3 20.1 192 97-334 17-217 (289)
227 1vs1_A 3-deoxy-7-phosphoheptul 84.6 36 0.0012 34.4 17.0 177 98-314 49-245 (276)
228 2rfg_A Dihydrodipicolinate syn 84.5 37 0.0013 34.4 18.9 193 97-334 17-218 (297)
229 3hqn_D Pyruvate kinase, PK; TI 84.4 43 0.0015 36.7 18.5 158 97-275 189-353 (499)
230 1o66_A 3-methyl-2-oxobutanoate 84.3 18 0.00061 36.6 14.4 137 105-277 28-196 (275)
231 3ngj_A Deoxyribose-phosphate a 84.3 12 0.00043 37.0 13.1 103 229-335 90-196 (239)
232 2tps_A Protein (thiamin phosph 84.2 7.7 0.00026 37.1 11.5 158 103-313 33-200 (227)
233 1thf_D HISF protein; thermophI 84.2 3.2 0.00011 40.6 8.9 195 101-336 30-244 (253)
234 3b0p_A TRNA-dihydrouridine syn 84.1 19 0.00066 37.4 15.3 139 161-311 68-223 (350)
235 3igs_A N-acetylmannosamine-6-p 84.1 3.9 0.00013 40.3 9.4 67 240-317 94-160 (232)
236 4eiv_A Deoxyribose-phosphate a 84.1 10 0.00035 38.8 12.5 105 228-335 94-205 (297)
237 3cpr_A Dihydrodipicolinate syn 83.9 40 0.0014 34.3 20.8 191 97-334 33-232 (304)
238 2ekc_A AQ_1548, tryptophan syn 83.6 37 0.0013 33.7 17.3 95 168-275 36-146 (262)
239 3r2g_A Inosine 5'-monophosphat 83.3 3.9 0.00013 43.1 9.5 72 234-315 99-171 (361)
240 1mzh_A Deoxyribose-phosphate a 83.0 35 0.0012 33.0 18.6 180 97-310 16-201 (225)
241 2w6r_A Imidazole glycerol phos 82.7 4.8 0.00016 39.8 9.5 196 102-335 31-248 (266)
242 3fa4_A 2,3-dimethylmalate lyas 82.7 3.2 0.00011 42.7 8.3 109 197-310 62-187 (302)
243 2yx0_A Radical SAM enzyme; pre 82.6 28 0.00097 35.5 15.7 105 169-278 185-308 (342)
244 1q7z_A 5-methyltetrahydrofolat 82.5 11 0.00036 42.2 13.1 188 83-310 322-535 (566)
245 3dz1_A Dihydrodipicolinate syn 82.5 12 0.00042 38.3 12.8 98 169-277 35-132 (313)
246 3l49_A ABC sugar (ribose) tran 82.5 20 0.00067 34.8 14.0 200 97-319 18-225 (291)
247 3khd_A Pyruvate kinase; malari 82.5 19 0.00065 39.7 14.7 159 97-275 213-378 (520)
248 3mcm_A 2-amino-4-hydroxy-6-hyd 82.4 7.4 0.00025 42.1 11.4 148 80-253 194-365 (442)
249 3lye_A Oxaloacetate acetyl hyd 82.4 7.1 0.00024 40.2 10.8 110 197-310 69-195 (307)
250 3m9w_A D-xylose-binding peripl 82.3 15 0.00052 36.3 13.2 202 96-318 14-222 (313)
251 3b4u_A Dihydrodipicolinate syn 82.3 44 0.0015 33.7 20.5 195 97-333 20-225 (294)
252 3ih1_A Methylisocitrate lyase; 82.3 12 0.00041 38.5 12.4 203 106-337 41-265 (305)
253 1o66_A 3-methyl-2-oxobutanoate 82.2 11 0.00038 38.2 11.9 98 173-288 34-138 (275)
254 3eol_A Isocitrate lyase; seatt 82.2 32 0.0011 37.0 16.0 203 164-384 161-406 (433)
255 1s2w_A Phosphoenolpyruvate pho 82.1 13 0.00043 38.1 12.5 108 197-310 62-187 (295)
256 1f6y_A 5-methyltetrahydrofolat 82.1 43 0.0015 33.4 17.8 166 97-291 21-200 (262)
257 4drs_A Pyruvate kinase; glycol 81.9 67 0.0023 35.4 19.5 166 97-275 212-384 (526)
258 1vyr_A Pentaerythritol tetrani 81.8 11 0.00036 39.7 12.2 80 234-316 161-274 (364)
259 3lmz_A Putative sugar isomeras 81.4 10 0.00035 36.8 11.3 106 163-290 30-135 (257)
260 2zds_A Putative DNA-binding pr 81.4 5.5 0.00019 40.3 9.6 148 165-337 113-287 (340)
261 3b8i_A PA4872 oxaloacetate dec 81.2 9.4 0.00032 38.9 11.1 150 106-272 33-203 (287)
262 1f76_A Dihydroorotate dehydrog 81.0 52 0.0018 33.6 18.8 77 231-312 222-317 (336)
263 1gte_A Dihydropyrimidine dehyd 80.7 21 0.00073 42.5 15.8 140 160-312 645-815 (1025)
264 1yxy_A Putative N-acetylmannos 80.7 13 0.00044 35.9 11.7 72 238-318 92-165 (234)
265 3gr4_A Pyruvate kinase isozyme 80.7 50 0.0017 36.6 17.3 158 97-275 239-403 (550)
266 3e96_A Dihydrodipicolinate syn 80.4 34 0.0012 35.0 15.3 195 97-335 29-229 (316)
267 1q7z_A 5-methyltetrahydrofolat 80.4 77 0.0026 35.2 23.9 209 97-334 118-380 (566)
268 3u0h_A Xylose isomerase domain 80.2 3.8 0.00013 40.1 7.7 202 98-338 16-243 (281)
269 3k13_A 5-methyltetrahydrofolat 80.1 25 0.00087 35.9 14.0 200 82-309 18-250 (300)
270 1vcv_A Probable deoxyribose-ph 80.0 20 0.0007 35.1 12.7 156 80-254 51-220 (226)
271 2qgq_A Protein TM_1862; alpha- 79.9 29 0.00099 35.0 14.5 143 96-253 31-190 (304)
272 2pgw_A Muconate cycloisomerase 79.8 9.4 0.00032 40.1 11.0 119 95-242 198-316 (384)
273 3vav_A 3-methyl-2-oxobutanoate 79.7 7.6 0.00026 39.4 9.7 99 173-289 46-150 (275)
274 2wkj_A N-acetylneuraminate lya 79.4 57 0.0019 33.1 20.0 193 97-334 28-229 (303)
275 3elf_A Fructose-bisphosphate a 79.4 32 0.0011 36.0 14.6 192 97-310 28-273 (349)
276 3p6l_A Sugar phosphate isomera 79.4 15 0.00051 35.6 11.7 114 162-291 21-138 (262)
277 2a4a_A Deoxyribose-phosphate a 79.2 22 0.00074 36.1 12.9 103 229-334 101-210 (281)
278 1qwg_A PSL synthase;, (2R)-pho 79.2 13 0.00043 37.2 10.9 141 177-335 39-196 (251)
279 3aty_A Tcoye, prostaglandin F2 79.1 17 0.00057 38.5 12.6 131 168-310 179-333 (379)
280 3iwp_A Copper homeostasis prot 79.1 26 0.00087 35.7 13.4 172 107-315 52-240 (287)
281 3rys_A Adenosine deaminase 1; 79.0 14 0.00046 38.6 11.8 157 161-336 75-240 (343)
282 4ab4_A Xenobiotic reductase B; 79.0 8.9 0.00031 40.3 10.4 125 172-310 162-305 (362)
283 2r91_A 2-keto-3-deoxy-(6-phosp 78.9 10 0.00035 38.4 10.5 99 229-334 14-115 (286)
284 2nuw_A 2-keto-3-deoxygluconate 78.9 7.4 0.00025 39.4 9.5 100 228-334 14-116 (288)
285 3ndo_A Deoxyribose-phosphate a 78.6 29 0.00099 34.1 13.4 104 230-335 76-186 (231)
286 4djd_D C/Fe-SP, corrinoid/iron 78.6 11 0.00039 39.0 10.9 137 102-274 81-236 (323)
287 3cny_A Inositol catabolism pro 78.5 39 0.0013 33.0 14.7 211 95-338 28-266 (301)
288 2x7v_A Probable endonuclease 4 78.4 32 0.0011 33.5 13.9 123 164-292 13-149 (287)
289 4fxs_A Inosine-5'-monophosphat 78.4 33 0.0011 37.4 15.2 132 101-254 230-363 (496)
290 3i4e_A Isocitrate lyase; struc 78.2 33 0.0011 36.9 14.6 200 164-382 168-409 (439)
291 3gnh_A L-lysine, L-arginine ca 78.2 7 0.00024 40.2 9.3 71 231-311 164-245 (403)
292 3noy_A 4-hydroxy-3-methylbut-2 78.0 7.3 0.00025 40.9 9.1 90 228-337 40-133 (366)
293 1zlp_A PSR132, petal death pro 78.0 13 0.00045 38.4 11.1 205 107-337 52-279 (318)
294 1w3i_A EDA, 2-keto-3-deoxy glu 77.9 7.6 0.00026 39.5 9.3 100 228-334 14-116 (293)
295 3l5l_A Xenobiotic reductase A; 77.9 9.2 0.00031 40.1 10.2 131 172-310 167-322 (363)
296 3fkr_A L-2-keto-3-deoxyarabona 77.9 25 0.00086 35.9 13.3 19 233-251 89-107 (309)
297 1nvm_A HOA, 4-hydroxy-2-oxoval 77.9 21 0.00072 37.0 12.9 34 186-223 16-49 (345)
298 1m3u_A 3-methyl-2-oxobutanoate 77.9 16 0.00055 36.8 11.4 137 105-277 28-196 (264)
299 4ay7_A Methylcobalamin\: coenz 77.7 3.8 0.00013 42.5 7.1 71 234-311 190-267 (348)
300 4fo4_A Inosine 5'-monophosphat 77.6 17 0.00058 38.3 12.1 68 236-312 109-176 (366)
301 3g8r_A Probable spore coat pol 77.6 6.9 0.00024 41.1 8.9 96 209-314 127-226 (350)
302 3g1w_A Sugar ABC transporter; 77.4 28 0.00095 34.1 13.2 202 97-318 17-221 (305)
303 2h9a_A Carbon monoxide dehydro 77.3 55 0.0019 35.3 16.2 157 115-310 128-290 (445)
304 2h3h_A Sugar ABC transporter, 77.2 43 0.0015 32.9 14.7 198 98-318 14-216 (313)
305 2zad_A Muconate cycloisomerase 77.1 18 0.00063 37.2 12.1 98 97-225 192-292 (345)
306 3nav_A Tryptophan synthase alp 76.8 35 0.0012 34.3 13.7 121 206-337 7-150 (271)
307 1ps9_A 2,4-dienoyl-COA reducta 76.7 15 0.00051 41.4 12.2 134 169-310 147-307 (671)
308 2bmb_A Folic acid synthesis pr 76.3 99 0.0034 34.2 19.5 39 80-122 228-275 (545)
309 1xm3_A Thiazole biosynthesis p 76.2 8.4 0.00029 38.5 8.9 166 107-311 29-205 (264)
310 2vef_A Dihydropteroate synthas 76.2 7.5 0.00026 40.1 8.7 78 227-313 25-112 (314)
311 3inp_A D-ribulose-phosphate 3- 76.1 5.4 0.00018 39.8 7.3 161 105-310 44-220 (246)
312 2r91_A 2-keto-3-deoxy-(6-phosp 76.0 25 0.00085 35.4 12.5 96 168-276 24-121 (286)
313 1icp_A OPR1, 12-oxophytodienoa 76.0 11 0.00036 39.9 10.0 134 169-310 173-327 (376)
314 1rvk_A Isomerase/lactonizing e 75.8 25 0.00084 36.7 12.8 98 97-224 210-309 (382)
315 3i4k_A Muconate lactonizing en 75.7 15 0.00053 38.5 11.2 119 95-242 202-320 (383)
316 3gka_A N-ethylmaleimide reduct 75.7 10 0.00035 39.8 9.7 126 171-310 169-313 (361)
317 3zwt_A Dihydroorotate dehydrog 75.7 36 0.0012 35.7 14.0 139 162-312 163-326 (367)
318 3qtg_A Pyruvate kinase, PK; TI 75.7 95 0.0032 33.6 19.6 197 97-316 178-384 (461)
319 2ovl_A Putative racemase; stru 75.5 13 0.00043 38.9 10.4 99 97-225 201-300 (371)
320 3t05_A Pyruvate kinase, PK; te 75.5 1.1E+02 0.0038 34.3 18.5 158 97-275 190-354 (606)
321 3eoo_A Methylisocitrate lyase; 75.3 5.9 0.0002 40.6 7.6 205 107-337 35-261 (298)
322 2y5s_A DHPS, dihydropteroate s 75.3 6.7 0.00023 40.1 8.0 81 227-314 38-125 (294)
323 2j6v_A UV endonuclease, UVDE; 75.2 25 0.00087 35.7 12.4 107 200-313 138-254 (301)
324 1ub3_A Aldolase protein; schif 75.2 31 0.0011 33.6 12.5 100 231-334 68-171 (220)
325 1r30_A Biotin synthase; SAM ra 75.2 15 0.00052 38.1 11.0 67 197-270 99-167 (369)
326 1olt_A Oxygen-independent copr 74.9 7.5 0.00026 41.9 8.7 84 168-253 155-239 (457)
327 1ep3_A Dihydroorotate dehydrog 74.5 7.9 0.00027 39.0 8.4 78 232-314 109-197 (311)
328 3kjx_A Transcriptional regulat 74.4 25 0.00085 35.4 12.2 196 97-318 81-283 (344)
329 3iix_A Biotin synthetase, puta 74.4 33 0.0011 34.8 13.2 64 197-267 84-147 (348)
330 3vav_A 3-methyl-2-oxobutanoate 74.2 38 0.0013 34.2 13.1 137 105-277 40-208 (275)
331 1q6o_A Humps, 3-keto-L-gulonat 74.0 44 0.0015 31.8 13.2 168 97-310 12-188 (216)
332 1p1x_A Deoxyribose-phosphate a 73.8 59 0.002 32.5 14.4 103 230-335 81-189 (260)
333 2c6q_A GMP reductase 2; TIM ba 73.6 10 0.00035 39.6 9.1 69 238-315 121-191 (351)
334 2p10_A MLL9387 protein; putati 73.5 48 0.0017 33.6 13.5 148 107-274 114-280 (286)
335 2r14_A Morphinone reductase; H 73.5 26 0.0009 36.8 12.3 80 234-314 166-276 (377)
336 4ef8_A Dihydroorotate dehydrog 73.4 69 0.0024 33.4 15.4 190 104-313 61-306 (354)
337 1mzh_A Deoxyribose-phosphate a 73.1 51 0.0017 31.9 13.5 81 233-314 69-153 (225)
338 3gd6_A Muconate cycloisomerase 73.1 81 0.0028 33.0 16.1 164 98-300 141-308 (391)
339 4avf_A Inosine-5'-monophosphat 72.9 35 0.0012 37.1 13.5 132 101-254 228-361 (490)
340 1sfl_A 3-dehydroquinate dehydr 72.9 73 0.0025 31.1 18.5 204 99-334 15-236 (238)
341 1tjy_A Sugar transport protein 72.6 77 0.0026 31.3 15.2 200 98-318 17-222 (316)
342 3rot_A ABC sugar transporter, 72.5 36 0.0012 33.2 12.6 259 97-389 16-287 (297)
343 3ixl_A Amdase, arylmalonate de 72.5 27 0.00093 34.2 11.4 122 104-257 56-190 (240)
344 2dri_A D-ribose-binding protei 72.4 36 0.0012 32.7 12.4 198 97-318 14-215 (271)
345 1xg4_A Probable methylisocitra 72.3 19 0.00065 36.7 10.5 206 107-337 30-257 (295)
346 3kws_A Putative sugar isomeras 72.2 11 0.00039 37.0 8.7 115 163-292 38-170 (287)
347 3i65_A Dihydroorotate dehydrog 72.2 56 0.0019 34.9 14.5 140 162-313 198-374 (415)
348 4gxw_A Adenosine deaminase; am 72.1 57 0.002 34.3 14.5 143 161-312 90-241 (380)
349 3obe_A Sugar phosphate isomera 72.1 25 0.00085 35.3 11.4 127 163-291 36-173 (305)
350 2hsa_B 12-oxophytodienoate red 71.7 50 0.0017 35.0 14.0 133 170-310 178-345 (402)
351 1f8m_A Isocitrate lyase, ICL; 71.7 71 0.0024 34.3 15.0 222 130-380 119-403 (429)
352 1ps9_A 2,4-dienoyl-COA reducta 71.6 12 0.00043 42.1 9.9 21 415-437 376-398 (671)
353 2z6i_A Trans-2-enoyl-ACP reduc 71.6 34 0.0012 35.0 12.4 160 104-313 26-191 (332)
354 1y0e_A Putative N-acetylmannos 71.6 12 0.00041 35.7 8.5 69 240-317 81-150 (223)
355 3pao_A Adenosine deaminase; st 71.6 16 0.00054 37.7 9.9 126 194-336 106-237 (326)
356 1y0e_A Putative N-acetylmannos 71.6 69 0.0024 30.2 20.9 164 97-311 18-202 (223)
357 2nuw_A 2-keto-3-deoxygluconate 71.4 24 0.00081 35.6 11.0 95 169-276 26-122 (288)
358 2qde_A Mandelate racemase/muco 71.2 31 0.0011 36.3 12.3 117 95-242 197-315 (397)
359 2nwr_A 2-dehydro-3-deoxyphosph 71.2 17 0.00058 36.6 9.7 137 115-274 95-252 (267)
360 1vrd_A Inosine-5'-monophosphat 71.2 9.9 0.00034 41.3 8.6 72 236-316 238-309 (494)
361 1f6k_A N-acetylneuraminate lya 71.0 90 0.0031 31.3 20.2 192 97-334 20-221 (293)
362 1icp_A OPR1, 12-oxophytodienoa 70.9 26 0.00088 36.9 11.5 81 234-315 167-278 (376)
363 3o1i_D Periplasmic protein TOR 70.7 19 0.00065 35.1 9.9 196 97-317 18-226 (304)
364 1e0t_A Pyruvate kinase, PK; ph 70.7 1.2E+02 0.0042 32.8 19.6 158 97-275 169-334 (470)
365 3tml_A 2-dehydro-3-deoxyphosph 70.6 9.5 0.00032 38.9 7.7 111 152-275 133-273 (288)
366 1u83_A Phosphosulfolactate syn 70.6 8.7 0.0003 38.9 7.2 117 206-329 82-213 (276)
367 3lg3_A Isocitrate lyase; conse 70.3 31 0.0011 37.1 11.8 53 221-274 155-219 (435)
368 2hmc_A AGR_L_411P, dihydrodipi 70.2 85 0.0029 32.5 15.2 195 97-334 43-246 (344)
369 1ypf_A GMP reductase; GUAC, pu 70.2 31 0.0011 35.5 11.8 92 209-315 86-179 (336)
370 3khj_A Inosine-5-monophosphate 70.1 47 0.0016 34.7 13.2 67 237-313 107-173 (361)
371 1eep_A Inosine 5'-monophosphat 69.9 10 0.00036 40.1 8.3 68 237-314 155-223 (404)
372 2dqw_A Dihydropteroate synthas 69.8 6.1 0.00021 40.5 6.1 80 227-313 44-130 (294)
373 3qm3_A Fructose-bisphosphate a 69.5 26 0.00088 36.8 10.9 200 89-310 29-284 (357)
374 1nu5_A Chloromuconate cycloiso 69.4 19 0.00066 37.4 10.1 106 95-229 196-301 (370)
375 3iar_A Adenosine deaminase; pu 69.3 27 0.00091 36.7 11.1 123 196-336 120-252 (367)
376 3ru6_A Orotidine 5'-phosphate 69.3 1E+02 0.0036 31.4 15.6 173 99-310 35-227 (303)
377 3l23_A Sugar phosphate isomera 69.2 18 0.00061 36.3 9.6 116 164-290 30-168 (303)
378 4hb7_A Dihydropteroate synthas 69.2 20 0.00068 36.2 9.6 83 227-316 22-111 (270)
379 2qgy_A Enolase from the enviro 69.1 9.4 0.00032 40.3 7.7 103 95-226 202-304 (391)
380 1oy0_A Ketopantoate hydroxymet 69.0 24 0.00081 35.8 10.2 91 172-275 50-148 (281)
381 1w3i_A EDA, 2-keto-3-deoxy glu 69.0 27 0.00092 35.3 10.8 38 208-245 82-120 (293)
382 3usb_A Inosine-5'-monophosphat 68.9 26 0.00089 38.4 11.4 72 236-319 257-328 (511)
383 4dwd_A Mandelate racemase/muco 68.9 18 0.00063 38.2 9.9 115 95-240 199-313 (393)
384 1f6y_A 5-methyltetrahydrofolat 68.9 16 0.00055 36.6 8.9 92 231-337 22-116 (262)
385 4fo4_A Inosine 5'-monophosphat 68.8 1.2E+02 0.004 31.8 16.1 127 104-254 110-240 (366)
386 2g0w_A LMO2234 protein; putati 68.8 54 0.0019 32.3 13.0 209 79-338 24-252 (296)
387 3q45_A Mandelate racemase/muco 68.6 1.1E+02 0.0039 31.6 16.9 165 99-300 140-305 (368)
388 1wa3_A 2-keto-3-deoxy-6-phosph 68.5 7.8 0.00027 36.6 6.3 69 231-310 19-87 (205)
389 3q45_A Mandelate racemase/muco 68.5 16 0.00056 38.1 9.3 102 95-225 192-293 (368)
390 3q94_A Fructose-bisphosphate a 68.5 23 0.00078 36.1 10.0 102 207-319 10-118 (288)
391 3jva_A Dipeptide epimerase; en 68.4 16 0.00054 38.0 9.1 119 95-242 191-310 (354)
392 4gj1_A 1-(5-phosphoribosyl)-5- 68.4 15 0.00051 36.2 8.5 191 103-333 33-241 (243)
393 2fvy_A D-galactose-binding per 68.3 89 0.003 30.2 15.3 196 98-318 16-236 (309)
394 2e28_A Pyruvate kinase, PK; al 68.2 1.6E+02 0.0053 33.0 17.9 160 97-276 170-336 (587)
395 2gou_A Oxidoreductase, FMN-bin 68.1 26 0.00089 36.7 10.8 79 234-315 161-272 (365)
396 2hjp_A Phosphonopyruvate hydro 67.9 64 0.0022 32.7 13.3 205 107-337 28-257 (290)
397 2xed_A Putative maleate isomer 67.7 75 0.0026 31.6 13.7 144 80-257 55-218 (273)
398 2hmc_A AGR_L_411P, dihydrodipi 67.4 14 0.00047 38.6 8.3 103 224-334 36-143 (344)
399 2r8c_A Putative amidohydrolase 67.3 14 0.00049 38.5 8.6 70 232-311 173-253 (426)
400 3n9r_A Fructose-bisphosphate a 67.2 22 0.00076 36.5 9.7 119 206-337 5-128 (307)
401 4avf_A Inosine-5'-monophosphat 67.2 14 0.0005 40.2 8.9 67 237-312 231-297 (490)
402 3kru_A NADH:flavin oxidoreduct 67.1 31 0.0011 35.9 11.0 131 172-310 152-304 (343)
403 4h1z_A Enolase Q92ZS5; dehydra 66.9 1.1E+02 0.0039 32.2 15.6 165 99-300 188-352 (412)
404 2nql_A AGR_PAT_674P, isomerase 66.9 8.1 0.00028 40.7 6.6 97 97-224 218-315 (388)
405 2nx9_A Oxaloacetate decarboxyl 66.7 1.5E+02 0.005 32.1 17.4 141 162-312 29-177 (464)
406 3pm6_A Putative fructose-bisph 66.5 1.2E+02 0.0041 31.0 17.8 196 88-311 23-249 (306)
407 1m3u_A 3-methyl-2-oxobutanoate 66.3 23 0.00079 35.6 9.4 97 174-288 35-137 (264)
408 3cyv_A URO-D, UPD, uroporphyri 66.3 23 0.0008 36.5 9.9 86 236-333 189-282 (354)
409 2rdx_A Mandelate racemase/muco 66.2 20 0.00069 37.4 9.5 103 95-229 197-299 (379)
410 3tml_A 2-dehydro-3-deoxyphosph 66.2 79 0.0027 32.1 13.4 178 99-315 29-246 (288)
411 2eja_A URO-D, UPD, uroporphyri 66.1 15 0.0005 37.8 8.3 83 234-333 179-271 (338)
412 3kke_A LACI family transcripti 66.0 42 0.0014 32.9 11.5 200 96-318 27-233 (303)
413 2q02_A Putative cytoplasmic pr 66.0 95 0.0032 29.7 16.1 102 164-273 52-162 (272)
414 3hgj_A Chromate reductase; TIM 65.9 32 0.0011 35.6 10.9 81 235-317 153-263 (349)
415 1tkk_A Similar to chloromucona 65.9 28 0.00096 36.0 10.5 119 95-242 193-313 (366)
416 2bdq_A Copper homeostasis prot 65.8 53 0.0018 32.2 11.6 136 87-253 63-206 (224)
417 2zvr_A Uncharacterized protein 65.7 28 0.00097 34.2 10.1 112 162-291 40-173 (290)
418 2g0w_A LMO2234 protein; putati 65.7 72 0.0025 31.4 13.2 115 163-290 36-157 (296)
419 3l23_A Sugar phosphate isomera 65.5 19 0.00064 36.2 8.8 123 78-219 13-159 (303)
420 3eol_A Isocitrate lyase; seatt 65.5 33 0.0011 36.9 10.9 54 221-275 148-213 (433)
421 3k4h_A Putative transcriptiona 64.6 49 0.0017 31.9 11.5 201 96-318 25-228 (292)
422 1mdl_A Mandelate racemase; iso 64.3 16 0.00054 37.8 8.2 98 97-224 199-297 (359)
423 1qop_A Tryptophan synthase alp 64.3 1.1E+02 0.0037 30.2 14.1 120 208-337 6-147 (268)
424 3dg3_A Muconate cycloisomerase 64.3 22 0.00075 37.1 9.3 105 95-229 193-297 (367)
425 2og9_A Mandelate racemase/muco 63.8 29 0.00099 36.5 10.2 95 96-219 216-311 (393)
426 2yr1_A 3-dehydroquinate dehydr 63.8 1.2E+02 0.004 30.0 19.1 224 78-335 6-251 (257)
427 1z41_A YQJM, probable NADH-dep 63.7 38 0.0013 34.8 10.9 78 234-315 144-251 (338)
428 3cqj_A L-ribulose-5-phosphate 63.7 1.1E+02 0.0038 29.7 15.7 124 163-291 30-170 (295)
429 2bmb_A Folic acid synthesis pr 63.6 28 0.00095 38.6 10.2 85 227-316 240-341 (545)
430 3sz8_A 2-dehydro-3-deoxyphosph 63.5 11 0.00039 38.3 6.6 182 98-315 31-245 (285)
431 1xm3_A Thiazole biosynthesis p 63.3 12 0.00042 37.3 6.8 130 162-316 22-156 (264)
432 3khj_A Inosine-5-monophosphate 63.3 76 0.0026 33.1 13.2 126 104-254 107-236 (361)
433 1xla_A D-xylose isomerase; iso 63.2 65 0.0022 33.6 12.8 144 165-336 118-277 (394)
434 3ozy_A Putative mandelate race 63.1 1.5E+02 0.0051 30.9 16.8 164 97-299 149-315 (389)
435 2inf_A URO-D, UPD, uroporphyri 63.1 12 0.00042 38.8 7.0 73 235-312 194-271 (359)
436 3mcm_A 2-amino-4-hydroxy-6-hyd 62.9 17 0.00057 39.3 8.1 79 227-311 206-297 (442)
437 3dgb_A Muconate cycloisomerase 62.8 29 0.00098 36.4 9.9 101 96-225 203-303 (382)
438 1r3s_A URO-D, uroporphyrinogen 62.8 11 0.00038 39.3 6.6 72 234-312 197-282 (367)
439 3dbi_A Sugar-binding transcrip 62.8 1.2E+02 0.0042 30.0 14.4 202 96-318 75-278 (338)
440 1r0m_A N-acylamino acid racema 62.8 17 0.00059 37.9 8.1 98 97-224 199-296 (375)
441 3tva_A Xylose isomerase domain 62.6 29 0.00098 34.0 9.4 115 162-289 20-160 (290)
442 3gr7_A NADPH dehydrogenase; fl 62.4 54 0.0018 33.9 11.7 78 235-316 145-252 (340)
443 3usb_A Inosine-5'-monophosphat 62.2 71 0.0024 34.9 13.2 131 102-254 256-388 (511)
444 3otr_A Enolase; structural gen 62.1 28 0.00097 37.6 9.6 136 97-267 280-418 (452)
445 2rjo_A Twin-arginine transloca 62.0 1.1E+02 0.0036 30.3 13.8 202 97-319 18-232 (332)
446 1sjd_A N-acylamino acid racema 62.0 18 0.00062 37.5 8.1 97 97-224 193-290 (368)
447 3lab_A Putative KDPG (2-keto-3 61.7 21 0.0007 34.9 7.8 68 231-310 22-89 (217)
448 1muw_A Xylose isomerase; atomi 61.6 72 0.0025 33.1 12.7 142 99-256 34-217 (386)
449 3l5a_A NADH/flavin oxidoreduct 61.6 13 0.00045 39.8 7.0 144 172-326 179-355 (419)
450 1mxs_A KDPG aldolase; 2-keto-3 61.5 20 0.00068 35.0 7.8 86 208-311 18-103 (225)
451 3o63_A Probable thiamine-phosp 61.4 1.3E+02 0.0043 29.6 14.2 112 159-310 39-159 (243)
452 1gvf_A Tagatose-bisphosphate a 61.3 38 0.0013 34.4 10.0 102 207-319 7-112 (286)
453 3aal_A Probable endonuclease 4 61.3 1.2E+02 0.0042 29.7 14.0 123 164-292 19-154 (303)
454 3ble_A Citramalate synthase fr 61.1 71 0.0024 32.9 12.4 59 204-263 169-230 (337)
455 1qo2_A Molecule: N-((5-phospho 61.1 29 0.001 33.5 9.0 183 101-330 30-237 (241)
456 2y88_A Phosphoribosyl isomeras 61.0 13 0.00044 36.0 6.4 69 236-312 33-102 (244)
457 1ydn_A Hydroxymethylglutaryl-C 60.8 26 0.00091 35.2 8.9 28 426-453 252-281 (295)
458 3gbv_A Putative LACI-family tr 60.7 54 0.0019 31.7 11.0 198 97-318 22-232 (304)
459 3stp_A Galactonate dehydratase 60.6 24 0.00083 37.5 8.9 97 95-219 238-334 (412)
460 4e38_A Keto-hydroxyglutarate-a 60.2 27 0.00091 34.4 8.4 87 208-312 26-112 (232)
461 3b0p_A TRNA-dihydrouridine syn 60.1 41 0.0014 34.8 10.4 79 231-313 67-164 (350)
462 3feq_A Putative amidohydrolase 59.9 22 0.00075 36.7 8.3 70 232-311 170-250 (423)
463 2zc8_A N-acylamino acid racema 59.9 20 0.00069 37.2 8.0 98 97-224 192-289 (369)
464 3b3d_A YTBE protein, putative 59.7 28 0.00095 35.5 8.9 52 85-136 43-101 (314)
465 1vrd_A Inosine-5'-monophosphat 59.7 94 0.0032 33.5 13.6 129 102-254 237-369 (494)
466 1olt_A Oxygen-independent copr 59.6 46 0.0016 35.7 11.0 112 105-222 154-286 (457)
467 2pp0_A L-talarate/galactarate 59.5 37 0.0013 35.7 10.1 95 96-219 229-324 (398)
468 1h5y_A HISF; histidine biosynt 59.5 34 0.0012 32.6 9.2 70 236-312 35-105 (253)
469 4dye_A Isomerase; enolase fami 59.5 43 0.0015 35.4 10.5 100 95-225 220-319 (398)
470 3ksm_A ABC-type sugar transpor 59.4 61 0.0021 30.8 11.0 201 97-318 13-221 (276)
471 3v3w_A Starvation sensing prot 59.3 24 0.00083 37.6 8.6 100 96-224 235-334 (424)
472 3tqp_A Enolase; energy metabol 59.3 25 0.00086 37.8 8.7 147 89-270 253-403 (428)
473 2a5h_A L-lysine 2,3-aminomutas 59.2 96 0.0033 32.8 13.3 130 203-337 147-283 (416)
474 1vzw_A Phosphoribosyl isomeras 59.1 13 0.00045 36.0 6.0 69 236-312 34-103 (244)
475 2f6u_A GGGPS, (S)-3-O-geranylg 59.1 1.4E+02 0.0047 29.3 14.6 69 231-310 146-215 (234)
476 3gk0_A PNP synthase, pyridoxin 59.1 51 0.0017 33.2 10.2 126 103-253 55-182 (278)
477 2qul_A D-tagatose 3-epimerase; 59.1 56 0.0019 31.7 10.8 118 163-291 17-156 (290)
478 3go2_A Putative L-alanine-DL-g 59.0 30 0.001 36.6 9.3 96 96-224 222-318 (409)
479 4fxs_A Inosine-5'-monophosphat 58.9 38 0.0013 37.0 10.3 69 237-314 233-301 (496)
480 1tzz_A Hypothetical protein L1 58.7 19 0.00063 37.9 7.5 94 97-219 220-318 (392)
481 3f4w_A Putative hexulose 6 pho 58.5 54 0.0019 30.7 10.2 91 208-313 42-134 (211)
482 1wv2_A Thiazole moeity, thiazo 58.4 77 0.0026 31.8 11.4 66 104-182 146-215 (265)
483 1gte_A Dihydropyrimidine dehyd 58.4 34 0.0012 40.8 10.5 79 231-313 645-735 (1025)
484 3mwc_A Mandelate racemase/muco 58.3 24 0.00081 37.4 8.3 105 95-229 213-317 (400)
485 2czd_A Orotidine 5'-phosphate 58.3 41 0.0014 31.8 9.3 164 98-311 9-183 (208)
486 4dpp_A DHDPS 2, dihydrodipicol 58.1 65 0.0022 33.7 11.4 29 424-452 296-334 (360)
487 3my9_A Muconate cycloisomerase 58.1 18 0.0006 38.0 7.2 117 95-240 199-315 (377)
488 3tr9_A Dihydropteroate synthas 57.8 66 0.0023 33.1 11.2 74 230-312 45-131 (314)
489 3vk5_A MOEO5; TIM barrel, tran 57.8 38 0.0013 34.4 9.2 61 221-289 43-104 (286)
490 2fn9_A Ribose ABC transporter, 57.8 92 0.0032 29.9 12.1 198 97-318 15-224 (290)
491 3k13_A 5-methyltetrahydrofolat 57.7 90 0.0031 31.8 12.2 140 231-380 34-182 (300)
492 3tfx_A Orotidine 5'-phosphate 57.6 1.1E+02 0.0038 30.4 12.6 166 99-310 15-213 (259)
493 3gd6_A Muconate cycloisomerase 57.6 52 0.0018 34.5 10.8 99 96-225 196-296 (391)
494 2cho_A Glucosaminidase, hexosa 57.6 43 0.0015 38.4 10.7 115 162-276 143-265 (716)
495 1thf_D HISF protein; thermophI 57.5 34 0.0012 33.1 8.8 70 236-312 32-102 (253)
496 1vc4_A Indole-3-glycerol phosp 57.4 67 0.0023 31.7 11.0 113 102-253 66-180 (254)
497 1j93_A UROD, uroporphyrinogen 57.2 90 0.0031 31.9 12.4 36 105-140 197-240 (353)
498 1qtw_A Endonuclease IV; DNA re 57.2 73 0.0025 30.7 11.2 124 163-292 12-150 (285)
499 2x7x_A Sensor protein; transfe 57.2 80 0.0027 31.2 11.8 199 98-319 19-223 (325)
500 1dos_A Aldolase class II; lyas 57.2 1.9E+02 0.0064 30.2 20.3 198 88-310 25-285 (358)
No 1
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=100.00 E-value=2.7e-117 Score=993.27 Aligned_cols=511 Identities=25% Similarity=0.334 Sum_probs=445.9
Q ss_pred CceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEee
Q 006969 78 NYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL 157 (623)
Q Consensus 78 ~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~ 157 (623)
+.++|+|||||||+|+++..|++++|++|+++|+++||++||+|||+++|+|+++++.|++... ..+ .+.+++|
T Consensus 70 ~~p~i~DtTLRDGeQ~~g~~~s~eeKl~Ia~~L~~lGVd~IEaGfP~asp~D~e~v~~i~~~~l--~~~----~~~i~aL 143 (644)
T 3hq1_A 70 RAPLWCAVDLRDGNQALIDPMSPARKRRMFDLLVRMGYKEIEVGFPSASQTDFDFVREIIEQGA--IPD----DVTIQVL 143 (644)
T ss_dssp SCCEEEECCCCCCGGGCSSCCCHHHHHHHHHHHHHHTCSEEEEECTTTCHHHHHHHHHHHHTTC--SCT----TCEEEEE
T ss_pred CCCEEEECCCCccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhcCC--CCC----CeEEEEE
Confidence 5589999999999999999999999999999999999999999999999999999999988521 011 2589999
Q ss_pred cccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC------eEEEcccCCCCC
Q 006969 158 SRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD------DVEFSPEDAGRS 231 (623)
Q Consensus 158 ~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~------~V~f~~eda~r~ 231 (623)
+|+++.||+++++++++++.++||+|+++||+|++++||+|++|+++++.++|+++++++.. .|+|++||++|+
T Consensus 144 ~r~~~~did~a~eal~~a~~~~Vhif~stSd~h~~~~l~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasrt 223 (644)
T 3hq1_A 144 TQCRPELIERTFQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTGT 223 (644)
T ss_dssp EESCHHHHHHHHHHHTTCSEEEEEEEEECCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGGS
T ss_pred ecCCHhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCCC
Confidence 99999999999999999999999999999999999999999999999999999988877532 278999999999
Q ss_pred CHHHHHHHHHHHHHc---CCc---EEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHh
Q 006969 232 DRKFLYEILGEVIKV---GAT---TLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA 305 (623)
Q Consensus 232 d~e~l~~~~~~~~~a---Ga~---~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~a 305 (623)
+++|++++++++.++ |++ +|+||||+|+++|.+++++|+++++++|..++++|++|||||+|||+||+++|+++
T Consensus 224 d~dfl~ev~~aa~eaG~~Gad~~~~I~LpDTvG~~tP~~~~~li~~l~~~v~~~~~v~l~vH~HND~GlAvANslaAv~A 303 (644)
T 3hq1_A 224 ELEYAKQVCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFAA 303 (644)
T ss_dssp CHHHHHHHHHHHHHHHCCCSSSCEEEEEEESSCCSCHHHHHHHHHHHHHHSTTGGGEEEEEEEBCTTSCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhcCCCCCceeEEEecCCCcccCHHHHHHHHHHHHHhcccccCceEEEecCCCCCcHHHHHHHHHHh
Confidence 999999999999986 577 89999999999999999999999999987667999999999999999999999999
Q ss_pred CCCEEEeccCCccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCCCcccCcchhhcccc
Q 006969 306 GARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESG 385 (623)
Q Consensus 306 GA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~~pivG~~aF~h~sG 385 (623)
||++||+|+||+|||+||++||+|+++|+. +|+++++|+++|.+++++|++++|+++++|+||||+|||+||||
T Consensus 304 GA~~Vdgti~G~GERaGNa~LE~lv~~L~~------~Gi~tgidl~~L~~is~~ve~~~g~~v~~~kpiVG~~aFah~SG 377 (644)
T 3hq1_A 304 GADRIEGCLFGNGERTGNVCLVTLGLNLFS------RGVDPQIDFSNIDEIRRTVEYCNQLPVHERHPYGGDLVYTAFSG 377 (644)
T ss_dssp TCCEEEEBGGGCSSTTCBCBHHHHHHHHHT------TTCCCSSCCTTHHHHHHHHHHHHSCCCCTTCTTTSTTTTEECCH
T ss_pred CCCEEEecCCCCCccccCccHHHHHHHHHh------cccCCccCHHHHHHHHHHHHHHhCCCCCCCcccccccceeeccc
Confidence 999999999999999999999999999985 47899999999999999999999999999999999999999999
Q ss_pred cccccccccC--------------------CccccCCCcccCCcccccceEeeeccccHHHHHHHHH-HcCCCCCHH---
Q 006969 386 IHQDGMLKHK--------------------GTYEIISPEDIGLERSSEAGIVLGKLSGRHALKDRLK-ELGYELNDE--- 441 (623)
Q Consensus 386 iH~dgi~k~~--------------------~~Ye~~~Pe~vG~~r~~~~~i~lg~~SG~~~i~~~l~-~lG~~l~~~--- 441 (623)
|||||++|++ .+||||+|++||++|+ ..|+|||||||++|+++|+ ++||+++++
T Consensus 378 iHqdailK~~~~~~~~~~~~~~~~~~~~w~~tYe~idPe~VG~~~~--~vi~v~~~SGk~~v~~~l~~~lG~~l~~~~~~ 455 (644)
T 3hq1_A 378 SHQDAINKGLDAMKLDADAADCDVDDMLWQVPYLPIDPRDVGRTYE--AVIRVNSQSGKGGVAYIMKTDHGLSLPRRLQI 455 (644)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGSCCCCTTCSSCGGGGTCCCE--ECC-------CCCHHHHHHHHHCCCCCHHHHH
T ss_pred ccHHHHhcCchhhhhhhhcccccccccccccccccCCHHHcCCcce--eEEeccCcCCHHHHHHHHHHhcCCCCChHHHH
Confidence 9999999997 4999999999998763 3577999999999999998 799999985
Q ss_pred HHHHHHHHHHHH-HHhcCcCCHHHHHHHHHHHhcCCcceeEEeeEEEEecc--CCeeEEEEEEEccCCeEEEEEEEecCH
Q 006969 442 QLGTIFWHFKAV-AEQKKRVTDADLIALVSDEIFQPEVVWKLLDMQVTCGT--LGLSTATVKLMDANGEEHVACSTGTGP 518 (623)
Q Consensus 442 ~~~~~~~~iK~l-ad~~~~v~d~dl~~L~~~~~~~~~~~~~L~~~~v~~g~--~~~~~AtV~l~~~~G~~~~~~a~G~GP 518 (623)
++.+++++++++ +++|++++++||+.|+.++|......|+|.++++.++. .+.++|+|+|. ++|++++.+++||||
T Consensus 456 ~~~~~~~~~~d~~~~~g~ev~~~dl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~l~-~~g~~~~~~a~GnGP 534 (644)
T 3hq1_A 456 EFSQVIQKIAEGTAGEGGEVSPKEMWDAFAEEYLAPVRPLERIRQHVDAADDDGGTTSITATVK-INGVETEISGSGNGP 534 (644)
T ss_dssp HHHHHHHHC---------CCCHHHHHHHHHHHHTSCCSSEEEEEEEEECCSSTTCCEEEEEEEE-ETTEEEEEEEEESSH
T ss_pred HHHHHHHHHHHhhhccCCcccHHHHHHHHHHHhccCCCceEEEEEEEEEeecCCCceEEEEEEE-ECCEEEEEEEecCCh
Confidence 566667777766 34678899999999999988766667999999998764 34689999997 799999999999999
Q ss_pred HHHHHHHHHHhhCCCceeeeeEEeecCCCCCceEEEEEEEEecc---------CC------c-ccccCCCc--------c
Q 006969 519 VDSAYKAVDLIVKEPATLLEYSMNAVTAGIDAIATTRVLIRGEK---------SQ------L-STHASTGE--------T 574 (623)
Q Consensus 519 VdA~~~AL~~~~~~~v~L~dY~v~av~~G~dA~a~~~V~i~~~~---------~~------~-~~~~~~g~--------~ 574 (623)
|||+++||+++ +.+++|.||++|++++|+||+|+++|+++.++ +. + ...++.|+ .
T Consensus 535 VdA~~~Al~~~-~~~~~l~~y~~~a~~~G~da~a~~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (644)
T 3hq1_A 535 LAAFVHALADV-GFDVAVLDYYEHAMSAGDDAQAAAYVEASVTIASPAQPGEAGRHASDPVTIASPAQPGEAGRHASDPV 613 (644)
T ss_dssp HHHHHHHHHTT-TCEEEEEEEEEEESSSSTTCCEEEEEEEEEEC------------------------------------
T ss_pred HHHHHHHHHHc-CCCceeeEEEEEccCCCCCceEEEEEEEEecccccccccccCcccccccccccccccccccccccccc
Confidence 99999999995 99999999999999999999999999998541 00 0 00011110 0
Q ss_pred cCceEEEEEecccHHHHHHHHHHHHHHhhh
Q 006969 575 VQRTFSGTGAGMDIVVSSVKAYIGALNKML 604 (623)
Q Consensus 575 ~~~~~~g~G~~~DIi~AS~~A~i~A~N~l~ 604 (623)
..+.|||+|+|+||++||++||++|+||++
T Consensus 614 ~~~~~~g~g~~~di~~AS~~A~~~a~n~~~ 643 (644)
T 3hq1_A 614 TSKTVWGVGIAPSITTASLRAVVSAVNRAA 643 (644)
T ss_dssp -CEEEEEEEEESSHHHHHHHHHHHHHHHHC
T ss_pred ccceEEEEEecccHHHHHHHHHHHHHHhhc
Confidence 123999999999999999999999999986
No 2
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=100.00 E-value=1.1e-94 Score=774.61 Aligned_cols=361 Identities=59% Similarity=0.847 Sum_probs=292.4
Q ss_pred CCCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEE
Q 006969 76 DPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVIC 155 (623)
Q Consensus 76 ~~~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~ 155 (623)
.|++|+|+|||||||+|+++..|++++|++|+++|+++||++||+|||.++|+|+++++++++..++ +.++
T Consensus 9 ~~~~v~I~DtTLRDG~Q~~~~~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~---------~~i~ 79 (370)
T 3rmj_A 9 QTNRVIIFDTTLRDGEQSPGAAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITK---------STVC 79 (370)
T ss_dssp -CCBCEEEECCCCCCTTSTTCCCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTTCSS---------SEEE
T ss_pred CCCCEEEEECCCCccccCCCCCcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHhCCC---------CeEE
Confidence 4677999999999999999999999999999999999999999999999999999999999875322 5899
Q ss_pred eecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHH
Q 006969 156 GLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKF 235 (623)
Q Consensus 156 ~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~ 235 (623)
+|+|++++||++++++++++|.++|++|+++||+|+++++++|++|+++++.++|++||++|.+ |+|++||++|++++|
T Consensus 80 ~l~r~~~~di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~-v~~~~ed~~r~~~~~ 158 (370)
T 3rmj_A 80 SLSRAIERDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDD-VEFSCEDALRSEIDF 158 (370)
T ss_dssp EEEESSHHHHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSC-EEEEEETGGGSCHHH
T ss_pred EEecCCHHHHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCE-EEEecCCCCccCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999986 999999999999999
Q ss_pred HHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccC
Q 006969 236 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 315 (623)
Q Consensus 236 l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~ 315 (623)
++++++++.++||++|+||||+|+++|.+++++|+.+++++|+.++++|++|||||+|||+||+++|+++||++||+|++
T Consensus 159 ~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~ 238 (370)
T 3rmj_A 159 LAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVN 238 (370)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGG
T ss_pred HHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEEEEecc
Confidence 99999999999999999999999999999999999999999865558999999999999999999999999999999999
Q ss_pred CccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCCCcccCcchhhcccccccccccccC
Q 006969 316 GIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDGMLKHK 395 (623)
Q Consensus 316 GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~~pivG~~aF~h~sGiH~dgi~k~~ 395 (623)
|||||+||++||+|+++|+.+.+ .+|++|++|+++|.+++++|++++|+++++++||||+|+|+|||||||||++|||
T Consensus 239 GlGeraGN~~lE~vv~~L~~~~~--~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~p~vG~~aF~h~sGiH~d~i~k~~ 316 (370)
T 3rmj_A 239 GLGERAGNASVEEIVMALKVRHD--LFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKHR 316 (370)
T ss_dssp GCSSTTCBCBHHHHHHHHHHTHH--HHCCBCCCCGGGHHHHHHHHHHHHTCCCCSSCTTTSTTTTC--------------
T ss_pred ccCcccccccHHHHHHHHHhhhh--ccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHhcccccHHHHHhCc
Confidence 99999999999999999986521 1488999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCcccCCcccccceEeeeccccHHHHHHHHHHcCCCCC-HHHHHHHHHHHH
Q 006969 396 GTYEIISPEDIGLERSSEAGIVLGKLSGRHALKDRLKELGYELN-DEQLGTIFWHFK 451 (623)
Q Consensus 396 ~~Ye~~~Pe~vG~~r~~~~~i~lg~~SG~~~i~~~l~~lG~~l~-~~~~~~~~~~iK 451 (623)
.+||||+||+||+.+ .+|+|||||||++|+++|+++||+++ ++++++++++||
T Consensus 317 ~~Ye~~~P~~vG~~~---~~i~~~~~sG~~~i~~~l~~~g~~~~~~~~~~~~~~~~k 370 (370)
T 3rmj_A 317 ETYEIMSAESVGWAT---NRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFK 370 (370)
T ss_dssp CCSCCCCHHHHTCC-------------------------------------------
T ss_pred hhccccCHHHcCCCC---ceEeccCCCCHHHHHHHHHHcCCCCCcHHHHHHHHHHhC
Confidence 999999999999632 25999999999999999999999999 889999999987
No 3
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=100.00 E-value=6.9e-94 Score=776.50 Aligned_cols=384 Identities=29% Similarity=0.431 Sum_probs=337.1
Q ss_pred cCCCCCCC---CCCCCCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhc
Q 006969 65 TRPEYIPN---RIPDPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVG 141 (623)
Q Consensus 65 ~~~~~~~~---~~~~~~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~ 141 (623)
++.+|-|. ..+++++|+|+|||||||+|++++.|++++|++|+++|+++||++||+|||.++|+|+++++.+++.
T Consensus 22 ~~~~~~~~~~~~~~~~~~V~I~DtTLRDG~Q~~~~~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~~~-- 99 (423)
T 3ivs_A 22 NGNPYGPNPSDFLSRVNNFSIIESTLREGEQFANAFFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAICKL-- 99 (423)
T ss_dssp -------CGGGGGCCTTSCEEEECTTTGGGGSTTCCCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTS--
T ss_pred CCCCCCCCccccccCCCcEEEEECCCCCCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHHhc--
Confidence 34445444 3345778999999999999999999999999999999999999999999999999999999998864
Q ss_pred cccccCCCccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeE
Q 006969 142 NAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDV 221 (623)
Q Consensus 142 ~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V 221 (623)
++.+.+++|+|++.+|+++++++ |+++|++|+++||.|+++++++|++|+++++.++|++||++|.+ |
T Consensus 100 -------~~~~~v~~~~r~~~~di~~A~~a----G~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~-V 167 (423)
T 3ivs_A 100 -------GLKCKILTHIRCHMDDARVAVET----GVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIE-V 167 (423)
T ss_dssp -------CCSSEEEEEEESCHHHHHHHHHT----TCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCE-E
T ss_pred -------CCCCEEEEeeccChhhHHHHHHc----CCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCE-E
Confidence 23367889999999999999886 89999999999999999999999999999999999999999985 9
Q ss_pred EEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHH
Q 006969 222 EFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIA 301 (623)
Q Consensus 222 ~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsla 301 (623)
+|++||++|++++|++++++++.++|+++|+||||+|+++|.+++++|+.+++.++ ++|++|||||+|||+||+++
T Consensus 168 ~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~----~~i~~H~Hnd~GlAvAN~la 243 (423)
T 3ivs_A 168 RFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVS----CDIECHFHNDTGMAIANAYC 243 (423)
T ss_dssp EEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCS----SEEEEEEBCTTSCHHHHHHH
T ss_pred EEEEccCcCCCHHHHHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcC----CeEEEEECCCCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999873 68999999999999999999
Q ss_pred HHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCCCcccCcchhh
Q 006969 302 GACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFA 381 (623)
Q Consensus 302 Av~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~~pivG~~aF~ 381 (623)
|+++||++||+|++|||||+||++||+|+++|..+.. +++.+++|+++|.+++++|++++|+++++|+||||+|||+
T Consensus 244 Av~aGa~~vd~ti~GlGERaGNa~Le~vv~~L~~~~~---~~~~~~idl~~L~~is~~v~~~~~~~v~~~kpivG~~aFa 320 (423)
T 3ivs_A 244 ALEAGATHIDTSILGIGERNGITPLGALLARMYVTDR---EYITHKYKLNQLRELENLVADAVEVQIPFNNYITGMCAFT 320 (423)
T ss_dssp HHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHHHHCH---HHHHHHSCGGGHHHHHHHHHHHTTCCCCTTCTTTSTTTTE
T ss_pred HHHhCCCEEEEecccccCcccchhHHHHHHHHHhhcc---cCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCchhHhHHH
Confidence 9999999999999999999999999999999976421 3578999999999999999999999999999999999999
Q ss_pred cccccccccccccCCccccCCCcccCCcccccceEeee-ccccHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcCcC
Q 006969 382 HESGIHQDGMLKHKGTYEIISPEDIGLERSSEAGIVLG-KLSGRHALKDRLKELGYELNDEQLGTIFWHFKAVAEQKKRV 460 (623)
Q Consensus 382 h~sGiH~dgi~k~~~~Ye~~~Pe~vG~~r~~~~~i~lg-~~SG~~~i~~~l~~lG~~l~~~~~~~~~~~iK~lad~~~~v 460 (623)
|||||||||++|||.+||||+||+||++|+ ++|| |||||++|+++|+++|++++++++++++++||+++++ +.+
T Consensus 321 h~sGiH~dgilk~~~tYe~~~Pe~vG~~r~----~~v~~k~SG~~~i~~~l~~lG~~l~~~~~~~~~~~vk~l~~~-~~~ 395 (423)
T 3ivs_A 321 HKAGIHAKAILANPSTYEILKPEDFGMSRY----VHVGSRLTGWNAIKSRAEQLNLHLTDAQAKELTVRIKKLADV-RTL 395 (423)
T ss_dssp EECSGGGGGSSSCGGGCCSSCGGGGTCCCC----EEESSCCCTHHHHHHHHHHTTCCC---CTTTSSTTTTTCC-C-CCC
T ss_pred hhcchhHHHHhCCccccCCcCHHHcCCcce----EEeccccCCHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhc-CCC
Confidence 999999999999999999999999999875 8875 9999999999999999999999999999999999985 579
Q ss_pred CHHHHHHHHHHHhc
Q 006969 461 TDADLIALVSDEIF 474 (623)
Q Consensus 461 ~d~dl~~L~~~~~~ 474 (623)
+++||..|+++...
T Consensus 396 ~~~el~~i~~~~~~ 409 (423)
T 3ivs_A 396 AMDDVDRVLREYHA 409 (423)
T ss_dssp CTTHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999976654
No 4
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=100.00 E-value=1e-87 Score=725.22 Aligned_cols=370 Identities=27% Similarity=0.428 Sum_probs=290.5
Q ss_pred CceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEee
Q 006969 78 NYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL 157 (623)
Q Consensus 78 ~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~ 157 (623)
++|+|+|||||||+|++++.|++++|++|++.|+++||++||+|||+++|+++++++.+++.. +...+++|
T Consensus 2 ~~v~I~DtTLRDG~Q~~~~~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~~~---------~~~~v~~~ 72 (382)
T 2ztj_A 2 REWKIIDSTLREGEQFEKANFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLASLG---------LKAKVVTH 72 (382)
T ss_dssp CCCEEEEEEETGGGGSTTCCCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSC---------CSSEEEEE
T ss_pred CceEEEECCCCcccCCCCCCcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHHHHhcC---------CCcEEEEE
Confidence 469999999999999999999999999999999999999999999999999999999988642 23578999
Q ss_pred cccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CCeEEEcccCCCCCCHHH
Q 006969 158 SRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLG--CDDVEFSPEDAGRSDRKF 235 (623)
Q Consensus 158 ~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G--~~~V~f~~eda~r~d~e~ 235 (623)
+|+..+||++++++ |++.|++|+++||+|++ ++++|++|+++++.++++++|++| ++ |+|++||+++++++|
T Consensus 73 ~r~~~~di~~a~~~----g~~~v~i~~~~s~~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~~~~-v~~~~ed~~~~~~~~ 146 (382)
T 2ztj_A 73 IQCRLDAAKVAVET----GVQGIDLLFGTSKYLRA-PHGRDIPRIIEEAKEVIAYIREAAPHVE-VRFSAEDTFRSEEQD 146 (382)
T ss_dssp EESCHHHHHHHHHT----TCSEEEEEECC---------CCCHHHHHHHHHHHHHHHHHHCTTSE-EEEEETTTTTSCHHH
T ss_pred cccChhhHHHHHHc----CCCEEEEEeccCHHHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCEE-EEEEEEeCCCCCHHH
Confidence 99999999998886 89999999999999999 999999999999999999999999 75 999999999999999
Q ss_pred HHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhC-CCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecc
Q 006969 236 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANT-PGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTI 314 (623)
Q Consensus 236 l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~-~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv 314 (623)
++++++++.++ |++|+||||+|+++|.+++++|+.+++.+ + +++|++|||||+|||+||+++|+++||++||+|+
T Consensus 147 ~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~---~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv 222 (382)
T 2ztj_A 147 LLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVVGP---RVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTI 222 (382)
T ss_dssp HHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTT---TSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBG
T ss_pred HHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCC---CCeEEEEeCCCccHHHHHHHHHHHhCCCEEEEcc
Confidence 99999999999 99999999999999999999999999985 4 3789999999999999999999999999999999
Q ss_pred CCccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCCCcccCcchhhccccccccccccc
Q 006969 315 NGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDGMLKH 394 (623)
Q Consensus 315 ~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~~pivG~~aF~h~sGiH~dgi~k~ 394 (623)
+|||||+||++||+|+++|+.+.. +|+.+++|+++|.++++++++++|+++++++||||.|+|+||||||+||++||
T Consensus 223 ~GlGeraGN~~lE~vv~~L~~~~~---~g~~t~idl~~L~~~s~~v~~~~~~~~~~~~p~vG~~~f~h~sGiH~~g~~k~ 299 (382)
T 2ztj_A 223 LGIGERNGITPLGGFLARMYTLQP---EYVRRKYKLEMLPELDRMVARMVGVEIPFNNYITGETAFSHKAGMHLKAIYIN 299 (382)
T ss_dssp GGCSSTTCBCBHHHHHHHHHHHCH---HHHHHHSCGGGHHHHHHHHHHHHTCCCCTTCTTTSTTTTEECCHHHHHHHHHC
T ss_pred ccccccccchhHHHHHHHHHhhcC---CcccCCCCHHHHHHHHHHHHHHhCCCCCcCCCcCCcchhheecccCCchhhcC
Confidence 999999999999999999987532 25789999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCcccCCcccccceEeee-ccccHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHh
Q 006969 395 KGTYEIISPEDIGLERSSEAGIVLG-KLSGRHALKDRLKELGYELNDEQLGTIFWHFKAVAEQKKRVTDADLIALVSDEI 473 (623)
Q Consensus 395 ~~~Ye~~~Pe~vG~~r~~~~~i~lg-~~SG~~~i~~~l~~lG~~l~~~~~~~~~~~iK~lad~~~~v~d~dl~~L~~~~~ 473 (623)
|.+||+|+|++||+.|. ++++ ++||+++|.++|+++||+++++++++++++||+++++++ ++++|+..|+.+..
T Consensus 300 ~~~Ye~~~P~~vG~~~~----v~~~s~~sG~~av~~~l~~~g~~~~~~~~~~~~~~vk~~~~~~~-~~~~~~~~~~~~~~ 374 (382)
T 2ztj_A 300 PEAYEPYPPEVFGVKRK----LIIASRLTGRHAIKARAEELGLHYGEEELHRVTQHIKALADRGQ-LTLEELDRILREWI 374 (382)
T ss_dssp GGGGCSSCGGGGTCCCE----ECCC-------------------------------------------------------
T ss_pred hhhhcccCHHHcCCccE----EEecccchhHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHh
Confidence 99999999999999873 7776 569999999999999999999999999999999998766 99999999987655
Q ss_pred c
Q 006969 474 F 474 (623)
Q Consensus 474 ~ 474 (623)
.
T Consensus 375 ~ 375 (382)
T 2ztj_A 375 T 375 (382)
T ss_dssp -
T ss_pred h
Confidence 3
No 5
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=1.5e-80 Score=655.69 Aligned_cols=315 Identities=53% Similarity=0.830 Sum_probs=253.3
Q ss_pred CCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEe
Q 006969 77 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG 156 (623)
Q Consensus 77 ~~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~ 156 (623)
|++|+|+|||||||+|+++..|++++|++|++.|+++||++||+|||.++|+|+++++.+++.+++ +.+++
T Consensus 4 ~~~v~I~DttlRDG~Q~~~~~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~---------~~i~~ 74 (325)
T 3eeg_A 4 GKRIFVFDTTLRDGEQVPGCQLNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKAVTR---------PTICA 74 (325)
T ss_dssp CEECEEEECGGGCC-------CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHHCCS---------SEEEE
T ss_pred CCceEEEECCCCCcccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHhCCC---------CEEEE
Confidence 567999999999999999999999999999999999999999999999999999999999886432 58999
Q ss_pred ecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHH
Q 006969 157 LSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFL 236 (623)
Q Consensus 157 ~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l 236 (623)
|+|++++|+++++++++++|.++|++|+++||+|+++++|+|++|+++++.++|+++|++|.. |+|++||+++++++|+
T Consensus 75 l~r~~~~~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~-v~f~~~d~~~~~~~~~ 153 (325)
T 3eeg_A 75 LTRAKEADINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHE-VEFFCEDAGRADQAFL 153 (325)
T ss_dssp ECCSCHHHHHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSE-EEEEEETGGGSCHHHH
T ss_pred eecCCHHHHHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE-EEEEccccccchHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999985 9999999999999999
Q ss_pred HHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCC
Q 006969 237 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTING 316 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~G 316 (623)
.++++++.++|+++|+||||+|+++|.+++++|+.+++++|+.++++|++|||||+|||+||+++|+++||++||+|++|
T Consensus 154 ~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd~tv~G 233 (325)
T 3eeg_A 154 ARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECTING 233 (325)
T ss_dssp HHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEEEBGGG
T ss_pred HHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEEEeccc
Confidence 99999999999999999999999999999999999999998654589999999999999999999999999999999999
Q ss_pred ccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCCCcccCcchhhcccccccccccccCC
Q 006969 317 IGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDGMLKHKG 396 (623)
Q Consensus 317 lGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~~pivG~~aF~h~sGiH~dgi~k~~~ 396 (623)
||||+||++||+|+++|+.+.+ .+|++|++|+++|.++++++++++|+++++++||||+|+|+|||||||||++|||.
T Consensus 234 lGer~GN~~lE~vv~~L~~~~~--~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~p~vG~~af~h~sGiH~~~~~k~~~ 311 (325)
T 3eeg_A 234 IGERAGNTALEEVVMAMECHKE--TLGLETGINHKKLVPISHLVSTLMRMQVQSNKAIVGRNAFAHSSGIHQDGFLKHRE 311 (325)
T ss_dssp CCSTTCCCBHHHHHHHHHHTHH--HHCEECCCCGGGHHHHHHHHHHHTTC------------------------------
T ss_pred ccccccchhHHHHHHHHHhhhh--ccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHhccccHHHHhcChh
Confidence 9999999999999999996431 14889999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCC
Q 006969 397 TYEIISP 403 (623)
Q Consensus 397 ~Ye~~~P 403 (623)
+||||+-
T Consensus 312 ~ye~~~~ 318 (325)
T 3eeg_A 312 TYEIIDE 318 (325)
T ss_dssp -------
T ss_pred hcCCCCC
Confidence 9999875
No 6
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=100.00 E-value=4.3e-77 Score=632.83 Aligned_cols=316 Identities=29% Similarity=0.425 Sum_probs=283.8
Q ss_pred CCceEEEeCCCcccCCCCCCCCCHHHHHHHHH-HHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCc-cceE
Q 006969 77 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIAR-QLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGY-VPVI 154 (623)
Q Consensus 77 ~~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~-~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l-~~~i 154 (623)
|++|+|+|||||||+|++++.|++++|++|++ .|+++||++||+|||.++|.||++++++++.... +. .+ ...+
T Consensus 17 ~~~v~I~DtTlRDG~Q~~~~~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~-~~---~~~~~~i 92 (337)
T 3ble_A 17 ETRLEILDVTLRDGEQTRGVSFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAAT-EQ---LTERIEI 92 (337)
T ss_dssp --CCEEEECHHHHHTTSTTCCCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHH-TT---CGGGEEE
T ss_pred CCceEEEECCCCCCCCCCCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhh-hc---cCCCCeE
Confidence 56799999999999999999999999999999 9999999999999999999999999999884210 00 01 1478
Q ss_pred EeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccC---CCCC
Q 006969 155 CGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED---AGRS 231 (623)
Q Consensus 155 ~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ed---a~r~ 231 (623)
++|+|+.+ |+++++++ |.+.|++|+++||.|+++++|+|++|+++++.++++++|++|++ |+|+++| ++++
T Consensus 93 ~~l~~~~~-~i~~a~~~----g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~-v~~~~~~~~~~~~~ 166 (337)
T 3ble_A 93 LGFVDGNK-TVDWIKDS----GAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLK-INVYLEDWSNGFRN 166 (337)
T ss_dssp EEESSTTH-HHHHHHHH----TCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCE-EEEEEETHHHHHHH
T ss_pred EEEccchh-hHHHHHHC----CCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE-EEEEEEECCCCCcC
Confidence 99999876 99999887 88999999999999999999999999999999999999999985 9999999 9999
Q ss_pred CHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEE
Q 006969 232 DRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 311 (623)
Q Consensus 232 d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd 311 (623)
+++|+.++++++.++|+++|+||||+|+++|.+++++|+.+++++|+ ++|++|||||+|||+||+++|+++||++||
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~---~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd 243 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPD---IHFEFHGHNDYDLSVANSLQAIRAGVKGLH 243 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTT---SCEEEECBCTTSCHHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCC---CeEEEEecCCcchHHHHHHHHHHhCCCEEE
Confidence 99999999999999999999999999999999999999999999974 789999999999999999999999999999
Q ss_pred eccCCccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCCCcccCcchhhcccccccccc
Q 006969 312 VTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDGM 391 (623)
Q Consensus 312 ~Tv~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~~pivG~~aF~h~sGiH~dgi 391 (623)
+|++|||||+||++||+|+++|+.+ +|+.+++|+++|.++++++++++|+++++++|+||.++|+||||||+||+
T Consensus 244 ~tv~GlG~~aGN~~~E~lv~~L~~~-----~g~~tgidl~~L~~~~~~v~~~~~~~~~~~~~~vg~~~f~h~~GiH~~g~ 318 (337)
T 3ble_A 244 ASINGLGERAGNTPLEALVTTIHDK-----SNSKTNINEIAITEASRLVEVFSGKRISANRPIVGEDVFTQTAGVHADGD 318 (337)
T ss_dssp EBGGGCSSTTCBCBHHHHHHHHHHH-----SSCCCCCCGGGHHHHHHHHHHHHCCCCCTTCTTTSTTTTCC---------
T ss_pred EecccccccccchhHHHHHHHHHHh-----cCCCCCcCHHHHHHHHHHHHHHHCCCCCCCccchhhhhhheecccCcCce
Confidence 9999999999999999999999974 47889999999999999999999999999999999999999999999999
Q ss_pred cccCCccccCCCcccCCcc
Q 006969 392 LKHKGTYEIISPEDIGLER 410 (623)
Q Consensus 392 ~k~~~~Ye~~~Pe~vG~~r 410 (623)
+|||.+||||+||+||++|
T Consensus 319 ~k~~~~ye~~~P~~vG~~~ 337 (337)
T 3ble_A 319 KKGNLYANPILPERFGRKR 337 (337)
T ss_dssp ---CTTCCSCCGGGGTCCC
T ss_pred eCCccccCCCChHHcCCCC
Confidence 9999999999999999864
No 7
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=100.00 E-value=3e-67 Score=547.08 Aligned_cols=284 Identities=47% Similarity=0.737 Sum_probs=256.4
Q ss_pred CCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEe
Q 006969 77 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG 156 (623)
Q Consensus 77 ~~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~ 156 (623)
+++|+|+|||||||+|++++.|++++|++|++.|+++||++||+|||.++|+|+++++.+++..++ +.+++
T Consensus 3 m~~v~I~DttlRDG~Q~~~~~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~---------~~i~~ 73 (293)
T 3ewb_X 3 LKKIQFFDTTLRDGEQTPGVNFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAIKH---------CSVTG 73 (293)
T ss_dssp CEEEEEEECTTTCCC-----CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHCCS---------SEEEE
T ss_pred CCeeEEEECCCCCcCcCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhcCC---------CEEEE
Confidence 357999999999999999999999999999999999999999999999999999999999886432 57999
Q ss_pred ecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHH
Q 006969 157 LSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFL 236 (623)
Q Consensus 157 ~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l 236 (623)
|+|++++|+++++++++++|.++|++|+++||+|+++|+++|++|+++++.++++++|++|.. |+|++||+++++++|+
T Consensus 74 l~~~~~~di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~-v~~~~~d~~~~~~~~~ 152 (293)
T 3ewb_X 74 LARCVEGDIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDV-VQFSPEDATRSDRAFL 152 (293)
T ss_dssp EEESSHHHHHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSC-EEEEEETGGGSCHHHH
T ss_pred EecCCHHHHHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCE-EEEEeccCCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999986 9999999999999999
Q ss_pred HHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCC
Q 006969 237 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTING 316 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~G 316 (623)
.++++++.++|+++|+||||+|+++|.+++++|+.+++++|+.++++|++|||||+|||+||+++|+++||++||+|++|
T Consensus 153 ~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~G 232 (293)
T 3ewb_X 153 IEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVEGTING 232 (293)
T ss_dssp HHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGG
T ss_pred HHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEEeeccc
Confidence 99999999999999999999999999999999999999998755688999999999999999999999999999999999
Q ss_pred ccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCCC
Q 006969 317 IGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHK 372 (623)
Q Consensus 317 lGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~~ 372 (623)
||||+||++||+|+++|+.+.+ .+|+.|++|+++|.++++++++++|+++++|+
T Consensus 233 lGeraGN~~~E~vv~~L~~~~~--~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~ 286 (293)
T 3ewb_X 233 IGERAGNTALEEVAVALHIRKD--FYQAETNIVLNQFKNSSDLISRLSGMPVPRNE 286 (293)
T ss_dssp CCTTTCBCBHHHHHHHHHHTHH--HHCEEECCCGGGHHHHHHHHHHC---------
T ss_pred cccccccHhHHHHHHHHHhhhh--hcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999986421 14899999999999999999999999999985
No 8
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=100.00 E-value=1.1e-60 Score=500.76 Aligned_cols=281 Identities=20% Similarity=0.300 Sum_probs=251.6
Q ss_pred CCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCC---h--hHH-HHHHHHHHHhccccccCCCc
Q 006969 77 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAAS---K--EDF-EAVRTIAKEVGNAVDAESGY 150 (623)
Q Consensus 77 ~~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s---~--~d~-e~v~~i~~~~~~~~~~~~~l 150 (623)
|++|+|+|||||||+|++++.|++++|++|++.|+++||++||+|||.++ | .|. +.++.+.+ . .
T Consensus 4 ~~~v~i~DtTlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~----~-~----- 73 (307)
T 1ydo_A 4 PKKVTIKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDR----E-K----- 73 (307)
T ss_dssp CSBCEEEECHHHHTGGGSSSCCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCC----C-T-----
T ss_pred CCceEEEECCCCCCcCCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhh----c-C-----
Confidence 46799999999999999999999999999999999999999999987543 3 233 33332221 1 1
Q ss_pred cceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE------Ec
Q 006969 151 VPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE------FS 224 (623)
Q Consensus 151 ~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~------f~ 224 (623)
...+++|.+ +.+|+++++++ |++.|++|.++||.|+++++++|++|+++++.++++++|++|++ |+ |+
T Consensus 74 ~~~~~~l~~-~~~~i~~a~~~----g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~-v~~~i~~~~~ 147 (307)
T 1ydo_A 74 GVTYAALVP-NQRGLENALEG----GINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLT-TRAYLSTVFG 147 (307)
T ss_dssp TCEEEEECC-SHHHHHHHHHH----TCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCE-EEEEEECTTC
T ss_pred CCeEEEEeC-CHHhHHHHHhC----CcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE-EEEEEEEEec
Confidence 146778885 78999999987 89999999999999999999999999999999999999999985 64 78
Q ss_pred ccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 006969 225 PEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (623)
Q Consensus 225 ~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 304 (623)
+||++|++++|+.++++++.++|+++|+||||+|+++|.+++++|+.+++++|+ ++|++|||||+|||+||+++|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~---~~l~~H~Hnd~Gla~AN~laAv~ 224 (307)
T 1ydo_A 148 CPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPA---NQIALHFHDTRGTALANMVTALQ 224 (307)
T ss_dssp BTTTBCCCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCG---GGEEEECBGGGSCHHHHHHHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCC---CeEEEEECCCCchHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999999973 78999999999999999999999
Q ss_pred hCCCEEEeccCCccC------ccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCCCcccCcc
Q 006969 305 AGARQVEVTINGIGE------RAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGAN 378 (623)
Q Consensus 305 aGA~~Vd~Tv~GlGE------RaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~~pivG~~ 378 (623)
+||++||+|++|||| |+||++||+|+++|+. +|+++++|+++|.++++++++++|++++++.|..|..
T Consensus 225 aGa~~vd~tv~GlGecp~a~graGN~~~E~lv~~L~~------~g~~t~idl~~L~~~~~~v~~~~~~~~~~~~~~~~~~ 298 (307)
T 1ydo_A 225 MGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQ------MDIKTNVKLEKLLSAAKWIEEKMGKPLPSRNLQVFKS 298 (307)
T ss_dssp HTCCEEEEBGGGCCEETTEEEEECBCBHHHHHHHHHH------TTCBCCCCHHHHHHHHHHHHHHHTSCCCCHHHHHHTC
T ss_pred hCCCEEEEcccccCCCCCCCCCCCChhHHHHHHHHHh------cCCCCCcCHHHHHHHHHHHHHHHCCCCchhhHHHHHH
Confidence 999999999999999 9999999999999986 4788999999999999999999999999999998876
Q ss_pred hhhc
Q 006969 379 AFAH 382 (623)
Q Consensus 379 aF~h 382 (623)
...|
T Consensus 299 ~~~~ 302 (307)
T 1ydo_A 299 SLEH 302 (307)
T ss_dssp ----
T ss_pred hhhh
Confidence 6655
No 9
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=100.00 E-value=2.5e-58 Score=481.40 Aligned_cols=276 Identities=20% Similarity=0.320 Sum_probs=248.2
Q ss_pred CCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCC---h--hHHH-HHHHHHHHhccccccCCCc
Q 006969 77 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAAS---K--EDFE-AVRTIAKEVGNAVDAESGY 150 (623)
Q Consensus 77 ~~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s---~--~d~e-~v~~i~~~~~~~~~~~~~l 150 (623)
|++|+|+|||||||+|+++..|++++|++|++.|+++||++||+||+.++ | .|.+ .++.+.+ . . +
T Consensus 3 ~~~v~i~D~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~-~----~---~- 73 (298)
T 2cw6_A 3 PKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQK-F----P---G- 73 (298)
T ss_dssp CSBCEEEECTTTHHHHTCSSCCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCC-C----T---T-
T ss_pred CCceEEEECCCCcccCCCCCCCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhh-C----C---C-
Confidence 46799999999999999999999999999999999999999999986543 3 2433 2222221 1 1 1
Q ss_pred cceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE------Ec
Q 006969 151 VPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE------FS 224 (623)
Q Consensus 151 ~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~------f~ 224 (623)
..++++. ++.+|+++++++ |++.|++|.++||.|+++++++|++|+++++.++++++|++|++ |+ |+
T Consensus 74 -~~~~~l~-~~~~~i~~a~~a----g~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~-v~~~l~~~~~ 146 (298)
T 2cw6_A 74 -INYPVLT-PNLKGFEAAVAA----GAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANIS-VRGYVSCALG 146 (298)
T ss_dssp -CBCCEEC-CSHHHHHHHHHT----TCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCE-EEEEEETTTC
T ss_pred -CEEEEEc-CCHHhHHHHHHC----CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCe-EEEEEEEEee
Confidence 2455555 578899998876 99999999999999999999999999999999999999999985 64 78
Q ss_pred ccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 006969 225 PEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (623)
Q Consensus 225 ~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 304 (623)
+||+++++++|+.++++++.++|+++|+|+||+|+++|.+++++|+.+++++|+ ++|++|||||+|||+||+++|++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~---~~i~~H~Hn~~Gla~An~laA~~ 223 (298)
T 2cw6_A 147 CPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPL---AALAVHCHDTYGQALANTLMALQ 223 (298)
T ss_dssp BTTTBSCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCG---GGEEEEEBCTTSCHHHHHHHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCC---CeEEEEECCCCchHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999999973 68999999999999999999999
Q ss_pred hCCCEEEeccCCccC------ccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCCCcccCc
Q 006969 305 AGARQVEVTINGIGE------RAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGA 377 (623)
Q Consensus 305 aGA~~Vd~Tv~GlGE------RaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~~pivG~ 377 (623)
+||++||+|++|||| |+||++||+|+++|+. +|+++++|+++|.++++++++++|+++++++|+.|.
T Consensus 224 aGa~~vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l~~------~g~~~~idl~~l~~~~~~~~~~~~~~~~~~~~~~~~ 296 (298)
T 2cw6_A 224 MGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEG------LGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQATC 296 (298)
T ss_dssp TTCCEEEEBTTSCCCCTTSCSSCCBCBHHHHHHHHHH------HTCBCCCCHHHHHHHHHHHHHHTTCCCCCHHHHHHC
T ss_pred hCCCEEEeecccccCCCCCCCCcCChhHHHHHHHHHh------cCCCCCcCHHHHHHHHHHHHHHHCCCCchhhhhhhc
Confidence 999999999999999 9999999999999986 378899999999999999999999999999998774
No 10
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.7e-58 Score=480.92 Aligned_cols=276 Identities=20% Similarity=0.273 Sum_probs=249.1
Q ss_pred CCCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCC---hh--HH-HHHHHHHHHhccccccCCC
Q 006969 76 DPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAAS---KE--DF-EAVRTIAKEVGNAVDAESG 149 (623)
Q Consensus 76 ~~~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s---~~--d~-e~v~~i~~~~~~~~~~~~~ 149 (623)
.|++|+|+|||||||+|++++.|++++|++|++.|+++||++||+|||.+. |. |+ +.++.+.+ .
T Consensus 5 ~~~~v~i~D~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~----~------ 74 (302)
T 2ftp_A 5 LPKKVRLVEVGPRDGLQNEKQPIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQ----R------ 74 (302)
T ss_dssp CCSBCEEEECTTTHHHHTSSSCCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCC----C------
T ss_pred CCCCcEEEeCCCCCCccCCCCCCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhh----c------
Confidence 356799999999999999999999999999999999999999999996432 22 33 33333322 1
Q ss_pred ccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE------E
Q 006969 150 YVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE------F 223 (623)
Q Consensus 150 l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~------f 223 (623)
....+++|. .+.+||++++++ |++.|++|.++||+|+++++|+|++|+++++.++|++||++|++ |+ |
T Consensus 75 ~~~~~~~l~-~~~~~i~~a~~a----G~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~-V~~~l~~~~ 148 (302)
T 2ftp_A 75 PGVTYAALA-PNLKGFEAALES----GVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVR-VRGYISCVL 148 (302)
T ss_dssp TTSEEEEEC-CSHHHHHHHHHT----TCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCE-EEEEEECTT
T ss_pred CCCEEEEEe-CCHHHHHHHHhC----CcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCe-EEEEEEEEe
Confidence 113577777 488999999886 99999999999999999999999999999999999999999985 75 7
Q ss_pred cccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHH
Q 006969 224 SPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGA 303 (623)
Q Consensus 224 ~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv 303 (623)
++||.++++++|+.++++++.++|+++|+||||+|+++|.++.++|+.+++++| +++|++|+|||+|||+||+++|+
T Consensus 149 ~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~---~~~l~~H~Hn~~Gla~An~laAv 225 (302)
T 2ftp_A 149 GCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVP---RERLAGHFHDTYGQALANIYASL 225 (302)
T ss_dssp CBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSC---GGGEEEEEBCTTSCHHHHHHHHH
T ss_pred eCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCC---CCeEEEEeCCCccHHHHHHHHHH
Confidence 888999999999999999999999999999999999999999999999999997 37899999999999999999999
Q ss_pred HhCCCEEEeccCCccC------ccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCCCcccC
Q 006969 304 CAGARQVEVTINGIGE------RAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVG 376 (623)
Q Consensus 304 ~aGA~~Vd~Tv~GlGE------RaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~~pivG 376 (623)
++||++||+|++|||| |+||++||+|+++|+. +|+++++|+++|.++++++++++|+++++++|+.+
T Consensus 226 ~aGa~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~------~g~~~~idl~~l~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
T 2ftp_A 226 LEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNG------LEIHTGVDMHALVDAGQRICAVLGKSNGSRAAKAL 298 (302)
T ss_dssp HTTCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHH------TTCBCCCCHHHHHHHHHHHHHHHCCCCSCHHHHHH
T ss_pred HhCCCEEEecccccCCCCCCCCCCCChhHHHHHHHHHh------cCCCCCcCHHHHHHHHHHHHHHhCCCCCccchhhc
Confidence 9999999999999999 9999999999999996 47889999999999999999999999999998874
No 11
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=100.00 E-value=1.2e-56 Score=497.90 Aligned_cols=279 Identities=15% Similarity=0.196 Sum_probs=248.5
Q ss_pred CCCCCCceEEEeCCCcccCCCCC-CCCCHHHHHHHHHHHhHcCCCEEEEecCCC--------ChhHHHHHHHHHHHhccc
Q 006969 73 RIPDPNYVRVFDTTLRDGEQSPG-ATLTSKEKLDIARQLAKLGVDIIEAGFPAA--------SKEDFEAVRTIAKEVGNA 143 (623)
Q Consensus 73 ~~~~~~~v~I~DtTLRDG~Q~~g-~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~--------s~~d~e~v~~i~~~~~~~ 143 (623)
.+.+|++|+|+|||||||+|+++ ..|++++|++|++.|+++||++||+|||++ +++++++++.|.+.+++
T Consensus 18 ~~~~~~~V~I~DtTLRDG~Qs~~~~~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~~- 96 (539)
T 1rqb_A 18 EVSEPREVGITELVLRDAHQSLMATRMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMPN- 96 (539)
T ss_dssp CCCCSEECEEEECTTTHHHHHHSTTCCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCTT-
T ss_pred cCCCCCceEEEECCCCchhccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCCC-
Confidence 34456789999999999999996 589999999999999999999999999976 88999999999986433
Q ss_pred cccCCCccceEEeecccc--------hhh-HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 006969 144 VDAESGYVPVICGLSRCN--------ERD-IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFAR 214 (623)
Q Consensus 144 ~~~~~~l~~~i~~~~r~~--------~~d-I~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak 214 (623)
..+++|+|.. ++| ++..++...++|++.|++|.++||+ +++.++++++|
T Consensus 97 --------~~l~~L~R~~N~~G~~~ypddv~~~~ve~a~~aGvd~vrIf~s~sd~--------------~ni~~~i~~ak 154 (539)
T 1rqb_A 97 --------SRLQMLLRGQNLLGYRHYNDEVVDRFVDKSAENGMDVFRVFDAMNDP--------------RNMAHAMAAVK 154 (539)
T ss_dssp --------SCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCT--------------HHHHHHHHHHH
T ss_pred --------CEEEEEeccccccCcccCcccccHHHHHHHHhCCCCEEEEEEehhHH--------------HHHHHHHHHHH
Confidence 3677777642 122 3344445555699999999999986 45678999999
Q ss_pred HcCCCeE--EEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCc
Q 006969 215 SLGCDDV--EFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDL 292 (623)
Q Consensus 215 ~~G~~~V--~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~ 292 (623)
++|+. | .++++|+++++++|++++++++.++||++|+||||+|+++|.+++++|+.+++++|+ +++|++|||||+
T Consensus 155 ~~G~~-v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~--~i~I~~H~Hnd~ 231 (539)
T 1rqb_A 155 KAGKH-AQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQ--KTQINLHCHSTT 231 (539)
T ss_dssp HTTCE-EEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCT--TCCEEEEEBCTT
T ss_pred HCCCe-EEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCC--CceEEEEeCCCC
Confidence 99985 6 578899999999999999999999999999999999999999999999999999972 478999999999
Q ss_pred chHHHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCCC
Q 006969 293 GLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHK 372 (623)
Q Consensus 293 GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~~ 372 (623)
|||+||+++|+++||++||+|++|+|||+||++||+|+++|+. +|+++++|+++|.+++++++++.++.++++.
T Consensus 232 GlAvAN~laAveAGa~~VD~ti~g~GertGN~~lE~lv~~L~~------~g~~tgidl~~L~~is~~v~~~~~~~~~~~~ 305 (539)
T 1rqb_A 232 GVTEVSLMKAIEAGVDVVDTAISSMSLGPGHNPTESVAEMLEG------TGYTTNLDYDRLHKIRDHFKAIRPKYKKFES 305 (539)
T ss_dssp SCHHHHHHHHHHTTCSEEEEBCGGGCSTTSBCBHHHHHHHTTT------SSEECCCCHHHHHHHHHHHHHHGGGGGGGCC
T ss_pred ChHHHHHHHHHHhCCCEEEEeccccCCCccChhHHHHHHHHHh------cCCCchhhHHHHHHHHHHHHHHhCCCcCCCC
Confidence 9999999999999999999999999999999999999999996 4788999999999999999999999999999
Q ss_pred cc-cCcchhhcc
Q 006969 373 AI-VGANAFAHE 383 (623)
Q Consensus 373 pi-vG~~aF~h~ 383 (623)
|+ +|.++|.|+
T Consensus 306 ~~~~~~~v~~he 317 (539)
T 1rqb_A 306 KTLVDTSIFKSQ 317 (539)
T ss_dssp SCSCCCTHHHHC
T ss_pred CccCCCceEEec
Confidence 98 999999976
No 12
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=100.00 E-value=3.2e-55 Score=457.08 Aligned_cols=270 Identities=18% Similarity=0.231 Sum_probs=244.4
Q ss_pred CCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCCh------hHHHHHHHHHHHhccccccCCCc
Q 006969 77 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASK------EDFEAVRTIAKEVGNAVDAESGY 150 (623)
Q Consensus 77 ~~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~------~d~e~v~~i~~~~~~~~~~~~~l 150 (623)
|++|+|+|||||||+|++++.|++++|++|++.|+++|+++||+|||.+++ .+++.++.+++. .
T Consensus 2 ~~~v~i~d~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~--------- 71 (295)
T 1ydn_A 2 AEHVEIVEMAARDGLQNEKRFVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-D--------- 71 (295)
T ss_dssp CCBCEEEECTTTHHHHTSSSCCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-S---------
T ss_pred CCceEEEECCCCccccCCCCCcCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-C---------
Confidence 467999999999999999999999999999999999999999999986643 467777776542 1
Q ss_pred cceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE------Ec
Q 006969 151 VPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE------FS 224 (623)
Q Consensus 151 ~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~------f~ 224 (623)
...+++|. ++.+++++++++ |++.|++++++||.|++++++++.+|+++++.++|++||++|++ |+ |+
T Consensus 72 ~~~v~~l~-~n~~~i~~a~~~----G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~-V~~~l~~~~~ 145 (295)
T 1ydn_A 72 GVRYSVLV-PNMKGYEAAAAA----HADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLA-IRGYVSCVVE 145 (295)
T ss_dssp SSEEEEEC-SSHHHHHHHHHT----TCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCE-EEEEEECSSE
T ss_pred CCEEEEEe-CCHHHHHHHHHC----CCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCe-EEEEEEEEec
Confidence 13566777 688999988875 99999999999999999999999999999999999999999985 77 78
Q ss_pred ccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 006969 225 PEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (623)
Q Consensus 225 ~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 304 (623)
+||+++++++++.++++.+.++|+++|+|+||+|.++|.++.++++.+++.+| +++|++|+|||+|||+||+++|++
T Consensus 146 ~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~---~~~l~~H~Hn~~Gla~an~l~Ai~ 222 (295)
T 1ydn_A 146 CPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAP---AHSLAGHYHDTGGRALDNIRVSLE 222 (295)
T ss_dssp ETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSC---GGGEEEEEBCTTSCHHHHHHHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCC---CCeEEEEECCCcchHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999987 378999999999999999999999
Q ss_pred hCCCEEEeccCCccC------ccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCC
Q 006969 305 AGARQVEVTINGIGE------RAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPH 371 (623)
Q Consensus 305 aGA~~Vd~Tv~GlGE------RaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~ 371 (623)
+||++||+|++|||| |+||++||+|+++|+. +|+++++|+++|.+++++++++.++..+..
T Consensus 223 aG~~~vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l~~------~g~~~~id~~~l~~~~~~~~~~~~~~~~~~ 289 (295)
T 1ydn_A 223 KGLRVFDASVGGLGGCPFAPGAKGNVDTVAVVEMLHE------MGFETGLDLDRLRSAGLFTQALRQDKAALE 289 (295)
T ss_dssp HTCCEEEEBTTCCSCBTTBTTSCCBCBHHHHHHHHHH------TTCBCCCCHHHHHHHHHHHHHHHCC-----
T ss_pred hCCCEEEeccccCCCCCCCCCCcCChhHHHHHHHHHh------cCCCCCcCHHHHHHHHHHHHHHHCCCCCcc
Confidence 999999999999999 9999999999999986 478899999999999999999999987654
No 13
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=100.00 E-value=1.5e-55 Score=483.31 Aligned_cols=311 Identities=19% Similarity=0.275 Sum_probs=267.7
Q ss_pred CCCceEEEeCCCcccCCCCC-CCCCHHHHHHHHHHHhHcCCCEEEEecCCC--------ChhHHHHHHHHHHHhcccccc
Q 006969 76 DPNYVRVFDTTLRDGEQSPG-ATLTSKEKLDIARQLAKLGVDIIEAGFPAA--------SKEDFEAVRTIAKEVGNAVDA 146 (623)
Q Consensus 76 ~~~~v~I~DtTLRDG~Q~~g-~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~--------s~~d~e~v~~i~~~~~~~~~~ 146 (623)
++++|+|+|||||||+|+++ ..|++++|++|++.|+++||+.||+|||++ +++++++++.+.+.+++
T Consensus 4 ~~~~V~I~DtTLRDG~Qs~~~~~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~---- 79 (464)
T 2nx9_A 4 AIKRVGVTDVVLRDAHQSLFATRLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPN---- 79 (464)
T ss_dssp CCCCCEEEECTTTHHHHHHSTTCCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSS----
T ss_pred CCCCcEEEECCccccccCCCCcCCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCCC----
Confidence 46779999999999999996 489999999999999999999999999876 78899999999886433
Q ss_pred CCCccceEEeecccc--------hhh-HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC
Q 006969 147 ESGYVPVICGLSRCN--------ERD-IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLG 217 (623)
Q Consensus 147 ~~~l~~~i~~~~r~~--------~~d-I~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G 217 (623)
..+++|+|+. ++| ++.-++....+|++.|++|.++||+ +++.++|+++|++|
T Consensus 80 -----~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~Gvd~i~if~~~sd~--------------~ni~~~i~~ak~~G 140 (464)
T 2nx9_A 80 -----TPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMNDV--------------RNMQQALQAVKKMG 140 (464)
T ss_dssp -----SCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCT--------------HHHHHHHHHHHHTT
T ss_pred -----CeEEEEeccccccCcccccchhhHHHHHHHHhCCcCEEEEEEecCHH--------------HHHHHHHHHHHHCC
Confidence 3577777743 122 2333344445699999999999996 34678999999999
Q ss_pred CCeEE--EcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH
Q 006969 218 CDDVE--FSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS 295 (623)
Q Consensus 218 ~~~V~--f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA 295 (623)
+. |+ ++.+|+.+++++|++++++++.++||++|+||||+|+++|.+++++|+.++++++ ++|++|||||+|||
T Consensus 141 ~~-v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~~----~~i~~H~Hnd~GlA 215 (464)
T 2nx9_A 141 AH-AQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVD----VELHLHCHSTAGLA 215 (464)
T ss_dssp CE-EEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHCC----SCEEEEECCTTSCH
T ss_pred CE-EEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhcC----CeEEEEECCCCChH
Confidence 85 65 4668999999999999999999999999999999999999999999999999983 68999999999999
Q ss_pred HHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCCCccc
Q 006969 296 TANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIV 375 (623)
Q Consensus 296 vANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~~piv 375 (623)
+||+++|+++||++||+|++|+|||+||++||+|+++|+. .|+++++|+++|.+++++++++.+. +.|++
T Consensus 216 vAN~laAv~AGa~~VD~ti~g~gertGN~~lE~lv~~L~~------~g~~tgidl~~L~~is~~v~~~~~~----~~~~~ 285 (464)
T 2nx9_A 216 DMTLLKAIEAGVDRVDTAISSMSGTYGHPATESLVATLQG------TGYDTGLDIAKLEQIAAYFRDVRKK----YHAFE 285 (464)
T ss_dssp HHHHHHHHHTTCSEEEEBCGGGCSTTSCCBHHHHHHHHTT------STTCCCCCHHHHHHHHHHHHHHHHH----TGGGC
T ss_pred HHHHHHHHHhCCCEEEEeccccCCCCcCHHHHHHHHHHHh------cCCCcccCHHHHHHHHHHHHHHHhh----ccccc
Confidence 9999999999999999999999999999999999999996 3788999999999999999999887 34444
Q ss_pred CcchhhcccccccccccccCCccccCCCcccCCcccccceEeeecccc--HHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Q 006969 376 GANAFAHESGIHQDGMLKHKGTYEIISPEDIGLERSSEAGIVLGKLSG--RHALKDRLKELGYELNDEQLGTIFWHFKAV 453 (623)
Q Consensus 376 G~~aF~h~sGiH~dgi~k~~~~Ye~~~Pe~vG~~r~~~~~i~lg~~SG--~~~i~~~l~~lG~~l~~~~~~~~~~~iK~l 453 (623)
| +.+|..+ ++.+....| .+++...|+++|+. +.+.+++++++++
T Consensus 286 ~---------------------------~~~g~~~----~v~~~~~pGg~~snl~~q~~~~g~~---~~~~~v~~~~~~v 331 (464)
T 2nx9_A 286 G---------------------------MMKGSDA----RILVAQVPGGMLTNMESQLKQQNAL---DKLDLVLEEIPRV 331 (464)
T ss_dssp C---------------------------SCCSCCT----HHHHHCCCHHHHHHHHHHHHTTSCG---GGHHHHHHHHHHH
T ss_pred C---------------------------CCcCCcC----CeEEecCCCchHhHHHHHHHHcCCH---hHHHHHHHHHHHH
Confidence 4 4667654 378888888 99999999999984 5677888888886
Q ss_pred -HHhcC
Q 006969 454 -AEQKK 458 (623)
Q Consensus 454 -ad~~~ 458 (623)
.+.++
T Consensus 332 ~~~~G~ 337 (464)
T 2nx9_A 332 REELGF 337 (464)
T ss_dssp HHHTTT
T ss_pred HHHcCC
Confidence 56665
No 14
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=100.00 E-value=5.7e-54 Score=457.01 Aligned_cols=277 Identities=22% Similarity=0.261 Sum_probs=247.0
Q ss_pred CCCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEe----cCCCC-------hhHHHHHHHHHHHhcccc
Q 006969 76 DPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAG----FPAAS-------KEDFEAVRTIAKEVGNAV 144 (623)
Q Consensus 76 ~~~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvG----fP~~s-------~~d~e~v~~i~~~~~~~~ 144 (623)
.+++|+|+|||||||+|++++.|++++|++|++.|+++||++||+| ||.++ +.++++++.+.+..++
T Consensus 5 ~~~~v~i~DttlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~-- 82 (345)
T 1nvm_A 5 PSKKLYISDVTLRDGSHAIRHQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISH-- 82 (345)
T ss_dssp CCCBCEEEECTTTHHHHHTTTCCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSS--
T ss_pred CCCCcEEEECCCCcccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCC--
Confidence 4567999999999999999999999999999999999999999998 88765 3578999888764322
Q ss_pred ccCCCccceEEee---cccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeE
Q 006969 145 DAESGYVPVICGL---SRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDV 221 (623)
Q Consensus 145 ~~~~~l~~~i~~~---~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V 221 (623)
..+++| +|++++++++++++ |++.|+++.+.|+. +.+.+.+++++++|++ |
T Consensus 83 -------~~i~~l~~p~~~~~~~i~~a~~a----Gvd~v~I~~~~s~~--------------~~~~~~i~~ak~~G~~-v 136 (345)
T 1nvm_A 83 -------AQIATLLLPGIGSVHDLKNAYQA----GARVVRVATHCTEA--------------DVSKQHIEYARNLGMD-T 136 (345)
T ss_dssp -------SEEEEEECBTTBCHHHHHHHHHH----TCCEEEEEEETTCG--------------GGGHHHHHHHHHHTCE-E
T ss_pred -------CEEEEEecCCcccHHHHHHHHhC----CcCEEEEEEeccHH--------------HHHHHHHHHHHHCCCE-E
Confidence 367777 77889999999887 99999999998874 4567899999999985 9
Q ss_pred EEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHH
Q 006969 222 EFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIA 301 (623)
Q Consensus 222 ~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsla 301 (623)
+|+++|+++++++|+.++++++.++|+++|+|+||+|.++|.++.++|+.+++++|+ +++|++|||||+|||+||+++
T Consensus 137 ~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~--~~pi~~H~Hn~~G~avAn~la 214 (345)
T 1nvm_A 137 VGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKP--ETQVGMHAHHNLSLGVANSIV 214 (345)
T ss_dssp EEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCT--TSEEEEECBCTTSCHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCC--CceEEEEECCCccHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999962 489999999999999999999
Q ss_pred HHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCCCcccCcchhh
Q 006969 302 GACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFA 381 (623)
Q Consensus 302 Av~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~~pivG~~aF~ 381 (623)
|+++||++||+|++|||||+||++||+|+++|+. +|+++++|+++|.++++++++... +..+|+-+...+.
T Consensus 215 A~~aGa~~vd~tv~GlG~~aGN~~le~lv~~L~~------~g~~~~idl~~l~~~~~~~~~~~~---~~~~~~~~~~~~~ 285 (345)
T 1nvm_A 215 AVEEGCDRVDASLAGMGAGAGNAPLEVFIAVAER------LGWNHGTDLYTLMDAADDIVRPLQ---DRPVRVDRETLGL 285 (345)
T ss_dssp HHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHHH------HTCBCCSCHHHHHHHHHHTTGGGC---SSCCSCCHHHHHH
T ss_pred HHHcCCCEEEecchhccCCccCcCHHHHHHHHHh------cCCCCCCCHHHHHHHHHHHHHHHh---cCCCCCChHHHhe
Confidence 9999999999999999999999999999999996 378899999999999999987421 2235888888888
Q ss_pred cccccccccc
Q 006969 382 HESGIHQDGM 391 (623)
Q Consensus 382 h~sGiH~dgi 391 (623)
..+|.|++-.
T Consensus 286 ~~~G~~~~~~ 295 (345)
T 1nvm_A 286 GYAGVYSSFL 295 (345)
T ss_dssp HHHTCCTTHH
T ss_pred eccccchhHH
Confidence 8899997543
No 15
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=100.00 E-value=5.2e-53 Score=483.29 Aligned_cols=313 Identities=19% Similarity=0.189 Sum_probs=263.4
Q ss_pred CCCCCceEEEeCCCcccCCCCCC-CCCHHHHHHHHHHHhHcC--CCEEEEe--------cCCCChhHHHHHHHHHHHhcc
Q 006969 74 IPDPNYVRVFDTTLRDGEQSPGA-TLTSKEKLDIARQLAKLG--VDIIEAG--------FPAASKEDFEAVRTIAKEVGN 142 (623)
Q Consensus 74 ~~~~~~v~I~DtTLRDG~Q~~g~-~~t~e~Kl~Ia~~L~~~G--vd~IEvG--------fP~~s~~d~e~v~~i~~~~~~ 142 (623)
+-++++|+|+|||||||+|+++. .|++++|++|++.|+++| ++.||+| ||..++.+|++++.+.+.+++
T Consensus 97 ~~~~~~I~I~DTTLRDG~Qs~~~~r~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l~~l~~~~~~ 176 (718)
T 3bg3_A 97 VRNHPGLLLMDTTFRDAHQSLLATRVRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQELRELIPN 176 (718)
T ss_dssp HHHCCSCEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCSS
T ss_pred HhccCCeEEeecCCChhhCCCCCcCCCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHHHHHHHHccc
Confidence 33457899999999999999986 599999999999999996 5559998 555566779999999987654
Q ss_pred ccccCCCccceEEeeccc-------------chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHH
Q 006969 143 AVDAESGYVPVICGLSRC-------------NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSM 209 (623)
Q Consensus 143 ~~~~~~~l~~~i~~~~r~-------------~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~ 209 (623)
. .++.|.|+ ...||++++++ |++.|++|.+.++ ++++..+
T Consensus 177 ~---------~l~~l~R~~n~vgy~~~p~~~~~~~i~~a~~~----Gvd~irIf~s~n~--------------l~~l~~~ 229 (718)
T 3bg3_A 177 I---------PFQMLLRGANAVGYTNYPDNVVFKFCEVAKEN----GMDVFRVFDSLNY--------------LPNMLLG 229 (718)
T ss_dssp S---------CEEEEECGGGTTSSSCCCHHHHHHHHHHHHHH----TCCEEEEECSSCC--------------HHHHHHH
T ss_pred c---------hHHHHhcccccccccccCCcchHHHHHHHHhc----CcCEEEEEecHHH--------------HHHHHHH
Confidence 2 46677776 35677777776 9999999998874 4567789
Q ss_pred HHHHHHcCCCeEEE----c--ccCCCCC--CHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcc
Q 006969 210 VKFARSLGCDDVEF----S--PEDAGRS--DRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIEN 281 (623)
Q Consensus 210 v~~ak~~G~~~V~f----~--~eda~r~--d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~ 281 (623)
++++++.|.. |++ . .+|.+|. +++|++++++++.++||++|+||||+|+++|.+++++|+.+++++|+
T Consensus 230 i~~ak~~G~~-v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p~--- 305 (718)
T 3bg3_A 230 MEAAGSAGGV-VEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFPD--- 305 (718)
T ss_dssp HHHHHTTTSE-EEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHSTT---
T ss_pred HHHHHHcCCe-EEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCCC---
Confidence 9999999964 543 3 2577776 99999999999999999999999999999999999999999999973
Q ss_pred eeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHH
Q 006969 282 VVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVE 361 (623)
Q Consensus 282 v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~ 361 (623)
++|++|||||+|||+||+++|++|||++||+|++|||||+||++||+|+++|+. .|+++++|+++|.+++++++
T Consensus 306 ~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ti~GlGertGN~~lE~vv~~L~~------~g~~tgidl~~L~~~s~~v~ 379 (718)
T 3bg3_A 306 LPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADSMSGMTSQPSMGALVACTRG------TPLDTEVPMERVFDYSEYWE 379 (718)
T ss_dssp CCEEEECCCTTSCHHHHHHHHHHTTCSEEEEBCGGGCSTTSCCBHHHHHHHHTT------STTCCCCCHHHHHHHHHHHH
T ss_pred CeEEEEECCCccHHHHHHHHHHHhCCCEEEecCcccccccCchhHHHHHHHHHh------cCCCcccCHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999997 37889999999999999999
Q ss_pred HHhCCCCCCC--CcccCcchhhcccccccccccccCCccccCCCcccCCcccccceEeeeccccHHHHHHHHHHcCCCCC
Q 006969 362 EYTGLHVQPH--KAIVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGLERSSEAGIVLGKLSGRHALKDRLKELGYELN 439 (623)
Q Consensus 362 ~~~g~~i~~~--~pivG~~aF~h~sGiH~dgi~k~~~~Ye~~~Pe~vG~~r~~~~~i~lg~~SG~~~i~~~l~~lG~~l~ 439 (623)
++.+++++.+ .+++|. +|+.+.++..| |+ .+++...|+++|+...
T Consensus 380 ~~~~~~~~~~~~~~~~g~-------------------~~~v~~~e~pG-----------g~---~snl~~q~~~~G~~~~ 426 (718)
T 3bg3_A 380 GARGLYAAFDCTATMKSG-------------------NSDVYENEIPG-----------GQ---YTNLHFQAHSMGLGSK 426 (718)
T ss_dssp HHHHHTGGGCGGGTCCSC-------------------CTTHHHHCCCH-----------HH---HHHHHGGGTTTSCTTH
T ss_pred HHhCCCcCCcCCcccccc-------------------ccceeeccCcc-----------hH---HHHHHHHHHHcCCCcc
Confidence 9999987766 666664 23344444444 12 3488899999999877
Q ss_pred HHHHHHHHHHHH-HHHHh
Q 006969 440 DEQLGTIFWHFK-AVAEQ 456 (623)
Q Consensus 440 ~~~~~~~~~~iK-~lad~ 456 (623)
.+++.+.+.+++ ++++.
T Consensus 427 ~~~v~~~~~~v~~~lG~~ 444 (718)
T 3bg3_A 427 FKEVKKAYVEANQMLGDL 444 (718)
T ss_dssp HHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 788888888888 45444
No 16
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=7.3e-51 Score=427.46 Aligned_cols=270 Identities=19% Similarity=0.243 Sum_probs=228.1
Q ss_pred ceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhH----------HHHHHHHHHHhccccccCC
Q 006969 79 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKED----------FEAVRTIAKEVGNAVDAES 148 (623)
Q Consensus 79 ~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d----------~e~v~~i~~~~~~~~~~~~ 148 (623)
+|+|+|||||||+|++++.|++++|++|++.|+++||++||+|||. +|.+ ++.++.|++ .++
T Consensus 2 ~V~I~DtTlRDG~Qs~~~~~~~~~k~~ia~~L~~aGv~~IEvg~~~-~p~~~f~~~~~~~~~e~l~~i~~-~~~------ 73 (320)
T 3dxi_A 2 SLKILDCTLRDGGYYTNWDFNSKIVDAYILAMNELPIDYLEVGYRN-KPSKEYMGKFGYTPVSVLKHLRN-IST------ 73 (320)
T ss_dssp -CEEEECHHHHHGGGGTTCCCHHHHHHHHHHHHTTTCCEEEEEECC-SCCSSCCCHHHHCCHHHHHHHHH-HCC------
T ss_pred eEEEEECCcCccccCCCCcCCHHHHHHHHHHHHHhCCCEEEEeccc-CCccccccccccChHHHHHHHhh-ccC------
Confidence 5899999999999999999999999999999999999999999974 4443 688888877 333
Q ss_pred CccceEEeecccc---hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 006969 149 GYVPVICGLSRCN---ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (623)
Q Consensus 149 ~l~~~i~~~~r~~---~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ 225 (623)
..+++|.|.. .+|++..+.+. .+|++.|.+|... | +++.+.++++++|++|++ |+|++
T Consensus 74 ---~~~~~L~r~~~~~~~dv~~~~~a~-~~Gvd~~ri~~~~---~-----------nle~~~~~v~~ak~~G~~-v~~~~ 134 (320)
T 3dxi_A 74 ---KKIAIMLNEKNTTPEDLNHLLLPI-IGLVDMIRIAIDP---Q-----------NIDRAIVLAKAIKTMGFE-VGFNV 134 (320)
T ss_dssp ---SEEEEEEEGGGCCGGGHHHHHGGG-TTTCSEEEEEECG---G-----------GHHHHHHHHHHHHTTTCE-EEEEE
T ss_pred ---CeEEEEecCCCCChhhHHHHHHhh-hcCCCEEEEEecH---H-----------HHHHHHHHHHHHHHCCCE-EEEEE
Confidence 3677777652 35787766554 3799999998643 2 378888999999999985 99999
Q ss_pred cCCCCC-CHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 006969 226 EDAGRS-DRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (623)
Q Consensus 226 eda~r~-d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 304 (623)
++++++ +++++++.+.+ .++|++.|+||||+|+++|.+++++|+.++++++ ++|++|||||+|||+||+++|++
T Consensus 135 ~~~~~~~~~~~~l~~~~~-~~~G~~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~----~~i~~H~Hn~~G~a~an~laA~~ 209 (320)
T 3dxi_A 135 MYMSKWAEMNGFLSKLKA-IDKIADLFCMVDSFGGITPKEVKNLLKEVRKYTH----VPVGFHGHDNLQLGLINSITAID 209 (320)
T ss_dssp CCTTTGGGSTTSGGGGGG-GTTTCSEEEEECTTSCCCHHHHHHHHHHHHHHCC----SCEEEECBCTTSCHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHH-hhCCCCEEEECcccCCCCHHHHHHHHHHHHHhCC----CeEEEEeCCCCccHHHHHHHHHH
Confidence 887776 34334444444 4789999999999999999999999999999985 67999999999999999999999
Q ss_pred hCCCEEEeccCCccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCCCcccCcchhhccc
Q 006969 305 AGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHES 384 (623)
Q Consensus 305 aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~~pivG~~aF~h~s 384 (623)
+||++||+|++|||||+||++||+|+++|+.. +.+++|++.|.+++++++++. +++++|.|+|.|+|
T Consensus 210 aGa~~vd~si~GlG~~~GN~~~E~lv~~L~~~-------~~~~~dl~~l~~~~~~~~~~~------~~~~~g~~~~~~~s 276 (320)
T 3dxi_A 210 DGIDFIDATITGMGRGAGNLKMELLLTYLNKH-------HGLNVDFNVLGNIITTFTPLL------EKYQWGTNLPYMLS 276 (320)
T ss_dssp TTCSEEEEBGGGCSSTTCBCBHHHHHHHHHHH-------SCCCCCHHHHHHHHHHHHHHH------HHHCCSCCHHHHHH
T ss_pred hCCCEEEEeccccCCcccchhHHHHHHHHHhc-------cCCCcCHHHHHHHHHHHHHHH------HhcCCCCchhhHHH
Confidence 99999999999999999999999999999962 347899999999999999875 67888888887766
Q ss_pred c---cccccccc
Q 006969 385 G---IHQDGMLK 393 (623)
Q Consensus 385 G---iH~dgi~k 393 (623)
| +|++++.+
T Consensus 277 g~~g~H~~~i~~ 288 (320)
T 3dxi_A 277 GANNIPQKEVMD 288 (320)
T ss_dssp HHTTCCHHHHHH
T ss_pred hccCCCHHHHHH
Confidence 5 99998844
No 17
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=100.00 E-value=6.8e-49 Score=472.61 Aligned_cols=304 Identities=20% Similarity=0.239 Sum_probs=256.3
Q ss_pred CCCCCceEEEeCCCcccCCCCCC-CCCHHHHHHHHHHHhHcCCCE--EEE----ecCCC----ChhHHHHHHHHHHHhcc
Q 006969 74 IPDPNYVRVFDTTLRDGEQSPGA-TLTSKEKLDIARQLAKLGVDI--IEA----GFPAA----SKEDFEAVRTIAKEVGN 142 (623)
Q Consensus 74 ~~~~~~v~I~DtTLRDG~Q~~g~-~~t~e~Kl~Ia~~L~~~Gvd~--IEv----GfP~~----s~~d~e~v~~i~~~~~~ 142 (623)
+-++++|+|+|||||||+|+++. .|++++|++|++.|+++||++ ||+ |||.+ ++.+|++++.+.+.+++
T Consensus 545 ~~~~~~v~i~DtTLRDG~Qs~~~~~~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p~e~l~~~~~~~~~ 624 (1165)
T 2qf7_A 545 MRNEKRVLLTDTTMRDGHQSLLATRMRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGAPN 624 (1165)
T ss_dssp HHHCSSCEEEECTTTHHHHHHHTTCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCHHHHHHHHHHHCTT
T ss_pred hhcCCceEEEecccccccccCCcccCCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCHHHHHHHHHHHchh
Confidence 33457899999999999999986 699999999999999997665 998 67743 66789999999987654
Q ss_pred ccccCCCccceEEeeccc-------------chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHH
Q 006969 143 AVDAESGYVPVICGLSRC-------------NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSM 209 (623)
Q Consensus 143 ~~~~~~~l~~~i~~~~r~-------------~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~ 209 (623)
. .+++|.|+ ..+||++++++ |++.+++|.+.++ ++++..+
T Consensus 625 ~---------~~~~l~R~~n~vg~~~~~~~~~~~~i~~a~~~----g~d~irif~sl~~--------------~~~~~~~ 677 (1165)
T 2qf7_A 625 L---------LLQMLLRGANGVGYTNYPDNVVKYFVRQAAKG----GIDLFRVFDCLNW--------------VENMRVS 677 (1165)
T ss_dssp S---------EEEEEEETTTBTCSSCCCHHHHHHHHHHHHHH----TCCEEEEECTTCC--------------GGGGHHH
T ss_pred h---------HHHHHhccccccccccCCchhHHHHHHHHHhc----CcCEEEEEeeHHH--------------HHHHHHH
Confidence 2 45556552 35678888876 8999999998764 4567789
Q ss_pred HHHHHHcCCCeEEEc------ccCCCC--CCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcc
Q 006969 210 VKFARSLGCDDVEFS------PEDAGR--SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIEN 281 (623)
Q Consensus 210 v~~ak~~G~~~V~f~------~eda~r--~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~ 281 (623)
++++++.|.. |++. .+|.+| ++++|++++++++.++||++|+||||+|+++|.+++++|+.++++++
T Consensus 678 i~~~~~~g~~-v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~---- 752 (1165)
T 2qf7_A 678 MDAIAEENKL-CEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREATG---- 752 (1165)
T ss_dssp HHHHHHTTCE-EEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHCS----
T ss_pred HHHHHhccce-EEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhcC----
Confidence 9999999964 5442 468888 89999999999999999999999999999999999999999999982
Q ss_pred eeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHH
Q 006969 282 VVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVE 361 (623)
Q Consensus 282 v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~ 361 (623)
++|++|||||+|||+||+++|++|||++||+|++|||||+||++||+|+++|+. .|+++++|+++|.+++++++
T Consensus 753 ~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~ti~GlGe~~Gn~~le~vv~~L~~------~g~~tgidl~~L~~~s~~~~ 826 (1165)
T 2qf7_A 753 LPIHFHTHDTSGIAAATVLAAVEAGVDAVDAAMDALSGNTSQPCLGSIVEALSG------SERDPGLDPAWIRRISFYWE 826 (1165)
T ss_dssp SCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCSBTSCCBHHHHHHHHTT------STTCCCCCHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhCCCEEEecccccCCCccchhHHHHHHHHHh------cCCCccccHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999999996 37889999999999999999
Q ss_pred HHhCCCCCCCCcccCcchhhcccccccccccccCCccccCCCcccCCcccccceEeeecccc--HHHHHHHHHHcCCCCC
Q 006969 362 EYTGLHVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGLERSSEAGIVLGKLSG--RHALKDRLKELGYELN 439 (623)
Q Consensus 362 ~~~g~~i~~~~pivG~~aF~h~sGiH~dgi~k~~~~Ye~~~Pe~vG~~r~~~~~i~lg~~SG--~~~i~~~l~~lG~~l~ 439 (623)
++.+... ++.|+.+|..+ ++......| .+++...++++|+.
T Consensus 827 ~~~~~~~-------------------------------~~~~~~~~~~~----~v~~~~~pGG~~snl~~q~~~~g~~-- 869 (1165)
T 2qf7_A 827 AVRNQYA-------------------------------AFESDLKGPAS----EVYLHEMPGGQFTNLKEQARSLGLE-- 869 (1165)
T ss_dssp HHHGGGG-------------------------------GGCCCCCSCCT----THHHHCCCHHHHHHHHHHHHHTTCG--
T ss_pred HHhhhcc-------------------------------CCCCCccCCcc----ceEeccCCCccHHHHHHHHHHcCCc--
Confidence 9988742 22356666654 366667777 88999999999986
Q ss_pred HHHHHHHHHHHHHH
Q 006969 440 DEQLGTIFWHFKAV 453 (623)
Q Consensus 440 ~~~~~~~~~~iK~l 453 (623)
+.+.++++.++++
T Consensus 870 -~~~~~v~~~~~~v 882 (1165)
T 2qf7_A 870 -TRWHQVAQAYADA 882 (1165)
T ss_dssp -GGHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHH
Confidence 4456666666655
No 18
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=100.00 E-value=8.5e-45 Score=436.27 Aligned_cols=260 Identities=17% Similarity=0.174 Sum_probs=227.3
Q ss_pred CCCCCCCceEEEeCCCcccCCCCCCC-CCHHHHHHHHHHHhHc--CCCEEEE--------ecCCCChhHHHHHHHHHHHh
Q 006969 72 NRIPDPNYVRVFDTTLRDGEQSPGAT-LTSKEKLDIARQLAKL--GVDIIEA--------GFPAASKEDFEAVRTIAKEV 140 (623)
Q Consensus 72 ~~~~~~~~v~I~DtTLRDG~Q~~g~~-~t~e~Kl~Ia~~L~~~--Gvd~IEv--------GfP~~s~~d~e~v~~i~~~~ 140 (623)
.++-++++|+|+|||||||+|++++. |++++|++|++.|+++ |+..||+ |||..++.+|+.++.+.+..
T Consensus 525 ~~~~~~~~v~I~DtTlRDG~Qs~~~~r~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e~~~e~l~~l~~~~ 604 (1150)
T 3hbl_A 525 EWVKKQDDVLLTDTTFRDAHQSLLATRVRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAI 604 (1150)
T ss_dssp HHHTTCSSBEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHC
T ss_pred HHHHhCCceEEEECccchhhccCCCcCCCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCCCHHHHHHHHHHhC
Confidence 45556788999999999999999886 9999999999999999 8888887 46888889999999999876
Q ss_pred ccccccCCCccceEEeeccc-------------chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHH
Q 006969 141 GNAVDAESGYVPVICGLSRC-------------NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIAR 207 (623)
Q Consensus 141 ~~~~~~~~~l~~~i~~~~r~-------------~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~ 207 (623)
++ ..++.|.|+ .+++++++++ +|+++|++|.++|++|+.++
T Consensus 605 ~~---------~~~~~l~R~~n~vgy~~~pd~v~~~~v~~a~~----~Gvd~irif~~~sd~~~~~~------------- 658 (1150)
T 3hbl_A 605 PN---------VLFQMLLRASNAVGYKNYPDNVIHKFVQESAK----AGIDVFRIFDSLNWVDQMKV------------- 658 (1150)
T ss_dssp CS---------SEEEEEEETTTBTCSSCCCHHHHHHHHHHHHH----TTCCEEEEECTTCCGGGGHH-------------
T ss_pred CC---------CeEEEEeccccccccccCCchhHHHHHHHHHh----CCcCEEEEEeeCCHHHHHHH-------------
Confidence 44 357888887 4455666665 49999999999999887543
Q ss_pred HHHHHHHHcCCCe---EE-----EcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCC
Q 006969 208 SMVKFARSLGCDD---VE-----FSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGI 279 (623)
Q Consensus 208 ~~v~~ak~~G~~~---V~-----f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~ 279 (623)
+++.+++.|... ++ |+||++++++++|++++++++.++||++|+||||+|+++|.+++++|+.+++++
T Consensus 659 -~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~--- 734 (1150)
T 3hbl_A 659 -ANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAV--- 734 (1150)
T ss_dssp -HHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC---
T ss_pred -HHHHHHHHhhheeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhc---
Confidence 445556667531 22 467788999999999999999999999999999999999999999999999997
Q ss_pred cceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHH
Q 006969 280 ENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKM 359 (623)
Q Consensus 280 ~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~ 359 (623)
+++|++|||||+|||+||+++|++|||++||+|++|||||+||++||+|+++|+. .|++|++|+++|.+++++
T Consensus 735 -~~~i~~H~Hnt~G~a~An~laA~~aGa~~vD~ai~GlG~~~gn~~lE~lv~~L~~------~g~~tgidl~~l~~~~~~ 807 (1150)
T 3hbl_A 735 -DLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDTAVASMSGLTSQPSANSLYYALNG------FPRHLRTDIEGMESLSHY 807 (1150)
T ss_dssp -CSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCSBTSCCBHHHHHHHTTT------SSCCBCSCHHHHHHHHHH
T ss_pred -CCeEEEEeCCCCcHHHHHHHHHHHhCCCEEEEeccccCCCCCCccHHHHHHHHHh------cCCCcCccHHHHHHHHHH
Confidence 3789999999999999999999999999999999999999999999999999986 378899999999999999
Q ss_pred HHHHhCCCC
Q 006969 360 VEEYTGLHV 368 (623)
Q Consensus 360 v~~~~g~~i 368 (623)
++++.+...
T Consensus 808 ~~~~~~~y~ 816 (1150)
T 3hbl_A 808 WSTVRTYYS 816 (1150)
T ss_dssp HHHHHGGGG
T ss_pred HHHHHhhhc
Confidence 999988543
No 19
>3f6g_B Alpha-isopropylmalate synthase; licmsc, allosteric regulation, feedback inhibition, selectivity, specificity, transferase; 2.00A {Leptospira interrogans} PDB: 3f6h_A
Probab=99.95 E-value=4e-28 Score=222.32 Aligned_cols=119 Identities=24% Similarity=0.286 Sum_probs=104.2
Q ss_pred eeEEeeEEEEeccCCeeEEEEEEEccCCeEEEEEEEecCHHHHHHHHHHHhhCC----CceeeeeEEeecCCC-CCceEE
Q 006969 479 VWKLLDMQVTCGTLGLSTATVKLMDANGEEHVACSTGTGPVDSAYKAVDLIVKE----PATLLEYSMNAVTAG-IDAIAT 553 (623)
Q Consensus 479 ~~~L~~~~v~~g~~~~~~AtV~l~~~~G~~~~~~a~G~GPVdA~~~AL~~~~~~----~v~L~dY~v~av~~G-~dA~a~ 553 (623)
.|+|.+|+|.++++..++|+|+|. ++|++++.+++|||||||+++||+++++. +++|.||++|++++| +||+|+
T Consensus 2 ~~~L~~~~v~~~~~~~~~a~v~l~-~~g~~~~~~a~GnGPVdA~~~Al~~~~~~~~~~~~~L~dY~v~al~~G~tdA~a~ 80 (127)
T 3f6g_B 2 VLTIKSCNIHSGIGIRPHAQIELE-YQGKIHKEISEGDGGYDAFMNALTKITNRLGISIPKLIDYEVRIPPGGKTDALVE 80 (127)
T ss_dssp CEEEEEEEEEECTTSCCEEEEEEE-ETTEEEEEEEECSSHHHHHHHHHHHHHHHHTCCCCEEEEEEEECCSSCCTTCCEE
T ss_pred eEEEEEEEEEECCCCceEEEEEEE-ECCEEEEEEEEccCHHHHHHHHHHHHhCccccCceEEEEEEEEcCCCCCCceEEE
Confidence 699999999998877899999998 79999999999999999999999999987 799999999999999 999999
Q ss_pred EEEEEEeccCCcccccCCCcccCceEEEEEecccHHHHHHHHHHHHHHhhhccc
Q 006969 554 TRVLIRGEKSQLSTHASTGETVQRTFSGTGAGMDIVVSSVKAYIGALNKMLGFK 607 (623)
Q Consensus 554 ~~V~i~~~~~~~~~~~~~g~~~~~~~~g~G~~~DIi~AS~~A~i~A~N~l~~~~ 607 (623)
++|+++..+. ..+++.|||+|+|+||++||++||++|+||++...
T Consensus 81 v~V~~~~~~~---------~~~g~~~~G~Gv~~DIi~AS~~A~~~alNr~~~~~ 125 (127)
T 3f6g_B 81 TRITWNKSLD---------LEEDQTFKTMGVHPDQTVAAVHATEKMLNQILQPW 125 (127)
T ss_dssp EEEEEEC-----------------CEEEEEEESSHHHHHHHHHHHHHHHHTC--
T ss_pred EEEEEEEccc---------cCCCcEEEEEEeCcCHHHHHHHHHHHHHHHHHhhc
Confidence 9999984100 00368999999999999999999999999998744
No 20
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.80 E-value=4.9e-08 Score=99.61 Aligned_cols=178 Identities=16% Similarity=0.141 Sum_probs=111.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChh-H---------------------HHHHHHHHHHhccccccCCCccceE
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-D---------------------FEAVRTIAKEVGNAVDAESGYVPVI 154 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d---------------------~e~v~~i~~~~~~~~~~~~~l~~~i 154 (623)
..+.++++++++.|.+.|+|.||+|+|.+.|- | ++.++.+.+..++ .|.+
T Consensus 27 ~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~--------~Pi~ 98 (262)
T 2ekc_A 27 YPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPD--------IPFL 98 (262)
T ss_dssp SSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT--------SCEE
T ss_pred CCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCC--------CCEE
Confidence 35678999999999999999999999987652 1 2345555544211 1322
Q ss_pred E--eecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCC
Q 006969 155 C--GLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSD 232 (623)
Q Consensus 155 ~--~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d 232 (623)
. -|.+...-+++..++....+|++.+.+. |+ .. +.+.+.++.++++|++.+.+.. ..++
T Consensus 99 ~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~----dl--------~~----ee~~~~~~~~~~~gl~~i~l~~---p~t~ 159 (262)
T 2ekc_A 99 LMTYYNPIFRIGLEKFCRLSREKGIDGFIVP----DL--------PP----EEAEELKAVMKKYVLSFVPLGA---PTST 159 (262)
T ss_dssp EECCHHHHHHHCHHHHHHHHHHTTCCEEECT----TC--------CH----HHHHHHHHHHHHTTCEECCEEC---TTCC
T ss_pred EEecCcHHHHhhHHHHHHHHHHcCCCEEEEC----CC--------CH----HHHHHHHHHHHHcCCcEEEEeC---CCCC
Confidence 2 1121112234455555566799876652 21 22 4466788999999985333332 1367
Q ss_pred HHHHHHHHHHHHHcCCcEEeecCcccccCHHH---HHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE
Q 006969 233 RKFLYEILGEVIKVGATTLNIPDTVGITMPTE---FGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 309 (623)
Q Consensus 233 ~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~---v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 309 (623)
.+.+.++++.... -+..+.+.+++|..+|.. +.++++.+++... +||.+ ++|...++...++.+||+.
T Consensus 160 ~~rl~~ia~~a~g-fiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~----~pv~v----G~GI~t~e~~~~~~~gADg 230 (262)
T 2ekc_A 160 RKRIKLICEAADE-MTYFVSVTGTTGAREKLPYERIKKKVEEYRELCD----KPVVV----GFGVSKKEHAREIGSFADG 230 (262)
T ss_dssp HHHHHHHHHHCSS-CEEEESSCC---------CHHHHHHHHHHHHHCC----SCEEE----ESSCCSHHHHHHHHTTSSE
T ss_pred HHHHHHHHHhCCC-CEEEEecCCccCCCCCcCcccHHHHHHHHHhhcC----CCEEE----eCCCCCHHHHHHHHcCCCE
Confidence 7888777766522 245667789999998855 8899999999762 45665 7888889999999999988
Q ss_pred E
Q 006969 310 V 310 (623)
Q Consensus 310 V 310 (623)
|
T Consensus 231 v 231 (262)
T 2ekc_A 231 V 231 (262)
T ss_dssp E
T ss_pred E
Confidence 6
No 21
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.32 E-value=4.8e-06 Score=85.26 Aligned_cols=174 Identities=18% Similarity=0.221 Sum_probs=108.3
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChh-H---------------------HHHHHHHHHHhccccccCCCccceEEe
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKE-D---------------------FEAVRTIAKEVGNAVDAESGYVPVICG 156 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d---------------------~e~v~~i~~~~~~~~~~~~~l~~~i~~ 156 (623)
+.+.-+++++.|.+.|+|.||+|+|.+.|- | ++.++++.+... . +|.+ .
T Consensus 32 ~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~-~-------~Piv-l 102 (271)
T 3nav_A 32 NPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNP-E-------TPIG-L 102 (271)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-T-------SCEE-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-C-------CCEE-E
Confidence 567789999999999999999999987662 1 244555544310 1 1322 2
Q ss_pred ecccch---hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCH
Q 006969 157 LSRCNE---RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDR 233 (623)
Q Consensus 157 ~~r~~~---~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~ 233 (623)
++=.++ -++++-++..+++|++.+.+. |+ ..| ...+.+++++++|++.|.+. +..++.
T Consensus 103 m~Y~n~v~~~g~~~f~~~~~~aGvdGvIip----Dl--------p~e----e~~~~~~~~~~~gl~~I~lv---ap~t~~ 163 (271)
T 3nav_A 103 LMYANLVYARGIDDFYQRCQKAGVDSVLIA----DV--------PTN----ESQPFVAAAEKFGIQPIFIA---PPTASD 163 (271)
T ss_dssp EECHHHHHHTCHHHHHHHHHHHTCCEEEET----TS--------CGG----GCHHHHHHHHHTTCEEEEEE---CTTCCH
T ss_pred EecCcHHHHHhHHHHHHHHHHCCCCEEEEC----CC--------CHH----HHHHHHHHHHHcCCeEEEEE---CCCCCH
Confidence 222222 244555555556699987653 21 222 35678899999998644333 224566
Q ss_pred HHHHHHHHHHHHcC-CcEEeecCccccc--CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHH-HHHhCCCE
Q 006969 234 KFLYEILGEVIKVG-ATTLNIPDTVGIT--MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIA-GACAGARQ 309 (623)
Q Consensus 234 e~l~~~~~~~~~aG-a~~I~l~DTvG~~--~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsla-Av~aGA~~ 309 (623)
+.+.++++... | +..+.+.+++|.. .|..+.++++.+|+... +|+.+ .+|....+... ++.+||+.
T Consensus 164 eri~~i~~~~~--gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~----~Pv~v----GfGIst~e~~~~~~~~gADg 233 (271)
T 3nav_A 164 ETLRAVAQLGK--GYTYLLSRAGVTGAETKANMPVHALLERLQQFDA----PPALL----GFGISEPAQVKQAIEAGAAG 233 (271)
T ss_dssp HHHHHHHHHCC--SCEEECCCC--------CCHHHHHHHHHHHHTTC----CCEEE----CSSCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHCC--CeEEEEeccCCCCcccCCchhHHHHHHHHHHhcC----CCEEE----ECCCCCHHHHHHHHHcCCCE
Confidence 76666655421 2 3444567888886 47889999999999763 45655 67777677777 99999998
Q ss_pred E
Q 006969 310 V 310 (623)
Q Consensus 310 V 310 (623)
|
T Consensus 234 v 234 (271)
T 3nav_A 234 A 234 (271)
T ss_dssp E
T ss_pred E
Confidence 7
No 22
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.13 E-value=1.4e-05 Score=81.68 Aligned_cols=174 Identities=18% Similarity=0.234 Sum_probs=107.6
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChh-H---------------------HHHHHHHHHHhccccccCCCccceEE
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKE-D---------------------FEAVRTIAKEVGNAVDAESGYVPVIC 155 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d---------------------~e~v~~i~~~~~~~~~~~~~l~~~i~ 155 (623)
.+.+.-+++++.|.+.|+|.||+|+|.+.|- | ++.++.+++... . .| +.
T Consensus 29 P~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~-~-------~P-iv 99 (267)
T 3vnd_A 29 PSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHP-D-------MP-IG 99 (267)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-T-------CC-EE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-C-------CC-EE
Confidence 4677789999999999999999999876652 1 344445444300 1 13 22
Q ss_pred eecccch---hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE-cccCCCCC
Q 006969 156 GLSRCNE---RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRS 231 (623)
Q Consensus 156 ~~~r~~~---~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f-~~eda~r~ 231 (623)
.++=.++ -++++-++..+++|++.+.+. |+ .. +...+.+++++++|++.+.+ .| .+
T Consensus 100 lm~Y~npv~~~g~e~f~~~~~~aGvdgvii~----Dl--------p~----ee~~~~~~~~~~~gl~~i~liaP----~t 159 (267)
T 3vnd_A 100 LLLYANLVFANGIDEFYTKAQAAGVDSVLIA----DV--------PV----EESAPFSKAAKAHGIAPIFIAPP----NA 159 (267)
T ss_dssp EEECHHHHHHHCHHHHHHHHHHHTCCEEEET----TS--------CG----GGCHHHHHHHHHTTCEEECEECT----TC
T ss_pred EEecCcHHHHhhHHHHHHHHHHcCCCEEEeC----CC--------CH----hhHHHHHHHHHHcCCeEEEEECC----CC
Confidence 2222232 244555555556699987653 21 11 23567889999999864433 33 45
Q ss_pred CHHHHHHHHHHHHHcC-CcEEeecCcccccC--HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHH-HHHhCC
Q 006969 232 DRKFLYEILGEVIKVG-ATTLNIPDTVGITM--PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIA-GACAGA 307 (623)
Q Consensus 232 d~e~l~~~~~~~~~aG-a~~I~l~DTvG~~~--P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsla-Av~aGA 307 (623)
+.+.+.++++... | +..+.+..++|... |.++.++++.+|+... +|+.+ ++|....+... ++.+||
T Consensus 160 ~~eri~~i~~~~~--gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~----~pv~v----GfGI~~~e~~~~~~~~gA 229 (267)
T 3vnd_A 160 DADTLKMVSEQGE--GYTYLLSRAGVTGTESKAGEPIENILTQLAEFNA----PPPLL----GFGIAEPEQVRAAIKAGA 229 (267)
T ss_dssp CHHHHHHHHHHCC--SCEEESCCCCCC--------CHHHHHHHHHTTTC----CCEEE----CSSCCSHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCC--CcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcC----CCEEE----ECCcCCHHHHHHHHHcCC
Confidence 6676666555421 2 23445577788764 7778999999998752 45665 67777677777 999999
Q ss_pred CEE
Q 006969 308 RQV 310 (623)
Q Consensus 308 ~~V 310 (623)
+.|
T Consensus 230 Dgv 232 (267)
T 3vnd_A 230 AGA 232 (267)
T ss_dssp SEE
T ss_pred CEE
Confidence 987
No 23
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.13 E-value=1.1e-05 Score=82.40 Aligned_cols=176 Identities=16% Similarity=0.184 Sum_probs=108.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChh-H---------------------HHHHHHHHHH-hccccccCCCccce
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-D---------------------FEAVRTIAKE-VGNAVDAESGYVPV 153 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d---------------------~e~v~~i~~~-~~~~~~~~~~l~~~ 153 (623)
.++.++.+++++.|.+.|+|.||+|.|.+.|- | ++.++.+.+. .. .|.
T Consensus 27 dp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~---------~Pv 97 (268)
T 1qop_A 27 DPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPT---------IPI 97 (268)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSS---------SCE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC---------CCE
Confidence 46778899999999999999999999987652 1 2445555543 11 132
Q ss_pred EE-e-ecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE-cccCCCC
Q 006969 154 IC-G-LSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGR 230 (623)
Q Consensus 154 i~-~-~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f-~~eda~r 230 (623)
+. + +.+.-.-+++..++.+..+|++.|.+..-. . +.+.+.++.++++|++.+.+ .| .
T Consensus 98 ~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~------------~----e~~~~~~~~~~~~g~~~i~l~~p----~ 157 (268)
T 1qop_A 98 GLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVP------------V----EESAPFRQAALRHNIAPIFICPP----N 157 (268)
T ss_dssp EEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCC------------G----GGCHHHHHHHHHTTCEEECEECT----T
T ss_pred EEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCC------------H----HHHHHHHHHHHHcCCcEEEEECC----C
Confidence 21 1 221111122333333444588877653211 1 33557788999999863433 33 2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCcccccCH--HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHH-HHhCC
Q 006969 231 SDRKFLYEILGEVIKVGATTLNIPDTVGITMP--TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAG-ACAGA 307 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P--~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaA-v~aGA 307 (623)
++.+.+.++++..... +..+.+..+.|..+| ..+.++|+.+++... ++|.+ +.|...++.... +.+||
T Consensus 158 t~~~~i~~i~~~~~g~-v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~----~pi~v----ggGI~t~e~~~~~~~agA 228 (268)
T 1qop_A 158 ADDDLLRQVASYGRGY-TYLLSRSGVTGAENRGALPLHHLIEKLKEYHA----APALQ----GFGISSPEQVSAAVRAGA 228 (268)
T ss_dssp CCHHHHHHHHHHCCSC-EEEESSSSCCCSSSCC--CCHHHHHHHHHTTC----CCEEE----ESSCCSHHHHHHHHHTTC
T ss_pred CCHHHHHHHHhhCCCc-EEEEecCCcCCCccCCCchHHHHHHHHHhccC----CcEEE----ECCCCCHHHHHHHHHcCC
Confidence 6667777766553211 234456678888554 457788999998652 45665 788885665554 99999
Q ss_pred CEE
Q 006969 308 RQV 310 (623)
Q Consensus 308 ~~V 310 (623)
+.|
T Consensus 229 D~v 231 (268)
T 1qop_A 229 AGA 231 (268)
T ss_dssp SEE
T ss_pred CEE
Confidence 986
No 24
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=98.07 E-value=0.00038 Score=73.12 Aligned_cols=219 Identities=16% Similarity=0.114 Sum_probs=143.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEec---CCCC--hhH-HHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGF---PAAS--KED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWE 170 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGf---P~~s--~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e 170 (623)
.++.++.++.++.+.+.|++.|-+.. |... .++ .+.++.+.+..+ +...+ ..+...++ .++
T Consensus 90 ~ls~eei~~~~~~~~~~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~--------i~i~~-s~g~~~~e----~l~ 156 (350)
T 3t7v_A 90 RLTMEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELG--------LPIMI-SPGLMDNA----TLL 156 (350)
T ss_dssp BCCHHHHHHHHHHHTTSCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHC--------SCEEE-ECSSCCHH----HHH
T ss_pred eCCHHHHHHHHHHHHHCCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhcC--------ceEEE-eCCCCCHH----HHH
Confidence 47999999999999999999887643 3211 111 244555544321 11111 11111222 345
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcE
Q 006969 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATT 250 (623)
Q Consensus 171 al~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~ 250 (623)
.++.+|++++.+.+-+.+-....+++.. ...+...++++.+++.|+. |......+..-+++.+.+.++.+.+.+++.
T Consensus 157 ~L~~aG~~~i~i~lEt~~~~~~~~i~~~--~~~~~~l~~i~~a~~~Gi~-v~~~~i~Glget~e~~~~~l~~l~~l~~~~ 233 (350)
T 3t7v_A 157 KAREKGANFLALYQETYDTELYRKLRVG--QSFDGRVNARRFAKQQGYC-VEDGILTGVGNDIESTILSLRGMSTNDPDM 233 (350)
T ss_dssp HHHHTTEEEEECCCBCSCHHHHHHHSTT--CCHHHHHHHHHHHHHHTCE-EEEEEEESSSCCHHHHHHHHHHHHHTCCSE
T ss_pred HHHHcCCCEEEEeeecCCHHHHHHhCCC--CCHHHHHHHHHHHHHcCCe-EccceEeecCCCHHHHHHHHHHHHhCCCCE
Confidence 5677899888877666543444455432 2245566788999999985 665544444566788889999999999987
Q ss_pred Eee------cCcc----cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCc---
Q 006969 251 LNI------PDTV----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI--- 317 (623)
Q Consensus 251 I~l------~DTv----G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~Gl--- 317 (623)
+.+ ++|- ...++.++.++++.+|-.+|+. .++.+++ .++......|+.+||+-+.+++..-
T Consensus 234 v~~~~f~p~~gT~l~~~~~~~~~e~l~~ia~~Rl~lp~~-~I~a~~~-----~~g~~~~~~~l~~Gan~~~~~~~~~~~~ 307 (350)
T 3t7v_A 234 VRVMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKR-LIPASLD-----LEGIDGMVLRLNAGANIVTSILPPDSQL 307 (350)
T ss_dssp EEEEECCCCTTSTTTTCCCCCCCCHHHHHHHHHHHSTTS-BCEEEHH-----HHHHHHHHHHHHTTCCEEEEECCSSCCC
T ss_pred EEecceeeCCCCcCccCCCCChHHHHHHHHHHHHhCCCc-Ccccccc-----ccChhHHHHHHhcCCceecCCCCCCCCC
Confidence 664 3442 2346788999999999999875 4666544 3344678899999999999998764
Q ss_pred -cCcc-------CcccHHHHHHHHHhcc
Q 006969 318 -GERA-------GNASLEEVVMAFKCRG 337 (623)
Q Consensus 318 -GERa-------GNa~lEevv~~L~~~~ 337 (623)
|-.. ++.+.++++..++..|
T Consensus 308 ag~~~~~~~~~~~~~~~~~~~~~i~~~G 335 (350)
T 3t7v_A 308 EGVANYDRDLEERDRDIKSVVRRLEIMG 335 (350)
T ss_dssp CCSSCTTTTCSSCCCCHHHHHHHHHHHT
T ss_pred CCCCCCcccchhccCCHHHHHHHHHHcC
Confidence 2211 2467889988888754
No 25
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=97.85 E-value=5.8e-05 Score=73.50 Aligned_cols=175 Identities=18% Similarity=0.105 Sum_probs=104.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
..+.++.+++++.|. -|+|.||+|+|.+...-++.++.+++...+. |..+.+.-.. ..+.-++....+|
T Consensus 9 ~~~~~~~~~~~~~~~-~~~diie~G~p~~~~~g~~~i~~ir~~~~~~--------~i~~~~~~~~--~~~~~~~~~~~~G 77 (211)
T 3f4w_A 9 ELTLPEAMVFMDKVV-DDVDIIEVGTPFLIREGVNAIKAIKEKYPHK--------EVLADAKIMD--GGHFESQLLFDAG 77 (211)
T ss_dssp SCCHHHHHHHHHHHG-GGCSEEEECHHHHHHHTTHHHHHHHHHCTTS--------EEEEEEEECS--CHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhh-cCccEEEeCcHHHHhccHHHHHHHHHhCCCC--------EEEEEEEecc--chHHHHHHHHhcC
Confidence 357899999999997 5999999999753333356788887652111 2222111111 1111133344469
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeec-C
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP-D 255 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~-D 255 (623)
++.|.+.....+ +.+.+.+++++++|.+ +.+.. ....++ .+.++.+.+.|++.|++- .
T Consensus 78 ad~v~v~~~~~~---------------~~~~~~~~~~~~~g~~-~~v~~--~~~~t~---~~~~~~~~~~g~d~i~v~~g 136 (211)
T 3f4w_A 78 ADYVTVLGVTDV---------------LTIQSCIRAAKEAGKQ-VVVDM--ICVDDL---PARVRLLEEAGADMLAVHTG 136 (211)
T ss_dssp CSEEEEETTSCH---------------HHHHHHHHHHHHHTCE-EEEEC--TTCSSH---HHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEEeCCCCh---------------hHHHHHHHHHHHcCCe-EEEEe--cCCCCH---HHHHHHHHHcCCCEEEEcCC
Confidence 999887543321 3345778888889975 44321 111232 355677788899998762 1
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 256 TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 256 TvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
..|...+....+.++.+++.+++ +++.+ +.|....|...++++||+.|
T Consensus 137 ~~g~~~~~~~~~~i~~l~~~~~~---~~i~~----~gGI~~~~~~~~~~~Gad~v 184 (211)
T 3f4w_A 137 TDQQAAGRKPIDDLITMLKVRRK---ARIAV----AGGISSQTVKDYALLGPDVV 184 (211)
T ss_dssp HHHHHTTCCSHHHHHHHHHHCSS---CEEEE----ESSCCTTTHHHHHTTCCSEE
T ss_pred CcccccCCCCHHHHHHHHHHcCC---CcEEE----ECCCCHHHHHHHHHcCCCEE
Confidence 11222221234677788887653 45544 45655678888999999987
No 26
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.60 E-value=0.00042 Score=70.01 Aligned_cols=169 Identities=21% Similarity=0.216 Sum_probs=102.7
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCCh---------------------h-HHHHHHHHHHHhccccccCCCccceEE
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASK---------------------E-DFEAVRTIAKEVGNAVDAESGYVPVIC 155 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~---------------------~-d~e~v~~i~~~~~~~~~~~~~l~~~i~ 155 (623)
++.++.+++++.|.+.|+|.||+|.|.+.| . -++.++.+.+.. . .|.+
T Consensus 29 ~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~--------~-~Pv~- 98 (262)
T 1rd5_A 29 PDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPEL--------S-CPVV- 98 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGC--------S-SCEE-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--------C-CCEE-
Confidence 456889999999999999999999987643 1 123344443321 1 2322
Q ss_pred eecccch---hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE-cccCCCCC
Q 006969 156 GLSRCNE---RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRS 231 (623)
Q Consensus 156 ~~~r~~~---~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f-~~eda~r~ 231 (623)
.+.+.+. .+++.+. .+|++.|++..-. . +.+.+.++.++++|++.+.+ +| .+
T Consensus 99 ~m~~~~~~~~~~~~~a~----~aGadgv~v~d~~------------~----~~~~~~~~~~~~~g~~~i~~~a~----~t 154 (262)
T 1rd5_A 99 LLSYYKPIMFRSLAKMK----EAGVHGLIVPDLP------------Y----VAAHSLWSEAKNNNLELVLLTTP----AI 154 (262)
T ss_dssp EECCSHHHHSCCTHHHH----HTTCCEEECTTCB------------T----TTHHHHHHHHHHTTCEECEEECT----TS
T ss_pred EEecCcHHHHHHHHHHH----HcCCCEEEEcCCC------------h----hhHHHHHHHHHHcCCceEEEECC----CC
Confidence 2333332 2444443 4589988763211 1 23557778899999863322 33 45
Q ss_pred CHHHHHHHHHHHHHcCCcEE---eecCcccc--cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHh
Q 006969 232 DRKFLYEILGEVIKVGATTL---NIPDTVGI--TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACA 305 (623)
Q Consensus 232 d~e~l~~~~~~~~~aGa~~I---~l~DTvG~--~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~a 305 (623)
+.+.+..+.+. +.+.+ .++.+.|. ..|....++++.+++..+ +||.+ +.|.. -.|....+.+
T Consensus 155 ~~e~~~~~~~~----~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~----~pI~v----gGGI~~~e~~~~~~~~ 222 (262)
T 1rd5_A 155 PEDRMKEITKA----SEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTN----KPVAV----GFGISKPEHVKQIAQW 222 (262)
T ss_dssp CHHHHHHHHHH----CCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHCS----SCEEE----ESCCCSHHHHHHHHHT
T ss_pred CHHHHHHHHhc----CCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhcC----CeEEE----ECCcCCHHHHHHHHHc
Confidence 55655554433 33333 24555665 334567789999998762 45665 78888 5677777788
Q ss_pred CCCEEEe
Q 006969 306 GARQVEV 312 (623)
Q Consensus 306 GA~~Vd~ 312 (623)
||+.|-+
T Consensus 223 GAdgvvV 229 (262)
T 1rd5_A 223 GADGVII 229 (262)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999753
No 27
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.32 E-value=0.00048 Score=69.64 Aligned_cols=174 Identities=10% Similarity=0.071 Sum_probs=103.5
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChh-H----H-------------HHHHHHHHHhccccccCCCccce-EEeecc
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKE-D----F-------------EAVRTIAKEVGNAVDAESGYVPV-ICGLSR 159 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d----~-------------e~v~~i~~~~~~~~~~~~~l~~~-i~~~~r 159 (623)
+.+.-+++++.|.+.|+|.||+|+|.+.|- | . +.+-.+.+.+... .|. +.++..
T Consensus 26 ~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~-------~Pivlm~Y~N 98 (252)
T 3tha_A 26 NLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK-------KALVFMVYYN 98 (252)
T ss_dssp CHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS-------SEEEEECCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC-------CCEEEEeccC
Confidence 678889999999999999999999987662 1 0 1111111212111 232 222221
Q ss_pred cc-hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHH
Q 006969 160 CN-ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYE 238 (623)
Q Consensus 160 ~~-~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~ 238 (623)
.. ..++++-++..+++|++.+-+.. ... +...+..+.++++|++.|.+.. ..++.+.+.+
T Consensus 99 ~i~~~G~e~F~~~~~~aGvdG~IipD------------LP~----eE~~~~~~~~~~~Gl~~I~lva---P~t~~eRi~~ 159 (252)
T 3tha_A 99 LIFSYGLEKFVKKAKSLGICALIVPE------------LSF----EESDDLIKECERYNIALITLVS---VTTPKERVKK 159 (252)
T ss_dssp HHHHHCHHHHHHHHHHTTEEEEECTT------------CCG----GGCHHHHHHHHHTTCEECEEEE---TTSCHHHHHH
T ss_pred HHHHhhHHHHHHHHHHcCCCEEEeCC------------CCH----HHHHHHHHHHHHcCCeEEEEeC---CCCcHHHHHH
Confidence 11 34677777777778988765432 122 2355778889999997444332 1355566655
Q ss_pred HHHHHHHcCCcEEeec---CcccccCH--HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 239 ILGEVIKVGATTLNIP---DTVGITMP--TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 239 ~~~~~~~aGa~~I~l~---DTvG~~~P--~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
+++. +-.-|++. -++|...+ ..+.++++.+|+... +|+.+ .+|........++..+|+.|
T Consensus 160 ia~~----a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~----~Pv~v----GfGIst~e~a~~~~~~ADGV 224 (252)
T 3tha_A 160 LVKH----AKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTN----LPIFV----GFGIQNNQDVKRMRKVADGV 224 (252)
T ss_dssp HHTT----CCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTCC----SCEEE----ESSCCSHHHHHHHTTTSSEE
T ss_pred HHHh----CCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhcC----CcEEE----EcCcCCHHHHHHHHhcCCEE
Confidence 5443 32334444 56676543 457889999998753 34554 35665666666676677765
No 28
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=97.25 E-value=0.035 Score=58.55 Aligned_cols=215 Identities=17% Similarity=0.136 Sum_probs=132.6
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEec----CCCChhHHHHHHHHHHHhccccccCCCccceEEe-ecccchhhHHHHHH
Q 006969 96 ATLTSKEKLDIARQLAKLGVDIIEAGF----PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-LSRCNERDIKTAWE 170 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~Gvd~IEvGf----P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~-~~r~~~~dI~~a~e 170 (623)
..++.++.++.++.+.+.|++.|-+|. |.. .+.+.+..+.+.+... ++ .++. .+-..++ .++
T Consensus 97 ~~~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~--~~~~~l~~ll~~ik~~-----g~--~i~~t~G~l~~e----~l~ 163 (369)
T 1r30_A 97 RLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHE--RDMPYLEQMVQGVKAM-----GL--EACMTLGTLSES----QAQ 163 (369)
T ss_dssp CCCCHHHHHHHHHHHHHTTCSEEEEEECCSSCCT--TTHHHHHHHHHHHHHT-----TS--EEEEECSSCCHH----HHH
T ss_pred ccCCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCc--CCHHHHHHHHHHHHHc-----CC--eEEEecCCCCHH----HHH
Confidence 357999999999999999999988753 432 2333344443332211 11 2321 1111222 345
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhC-CCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcC--
Q 006969 171 AVKYAKRPRIHTFIATSGIHMEHKLR-KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG-- 247 (623)
Q Consensus 171 al~~a~~~~v~i~~~~Sd~h~~~~l~-~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aG-- 247 (623)
.++.+|++++.+-+.+++-.....-+ .+ .+...+.++.+++.|+. |.....-+..-+.+.+.+.++.+.+.+
T Consensus 164 ~L~~aGvd~v~i~les~~e~~~~i~~~~~----~~~~l~~i~~a~~~Gi~-v~~~~I~Gl~et~ed~~~~l~~l~~l~~~ 238 (369)
T 1r30_A 164 RLANAGLDYYNHNLDTSPEFYGNIITTRT----YQERLDTLEKVRDAGIK-VCSGGIVGLGETVKDRAGLLLQLANLPTP 238 (369)
T ss_dssp HHHHHCCCEEECCCBSCHHHHHHHCCSSC----HHHHHHHHHHHHHHHCE-EECCEEECSSCCHHHHHHHHHHHHSSSSC
T ss_pred HHHHCCCCEEeecCcCCHHHHHHhCCCCC----HHHHHHHHHHHHHcCCe-eeeeeEeeCCCCHHHHHHHHHHHHhhcCC
Confidence 56667999999988876654443333 24 45566678888888884 655443333456788889999999887
Q ss_pred CcEEee------cCc----ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCc
Q 006969 248 ATTLNI------PDT----VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI 317 (623)
Q Consensus 248 a~~I~l------~DT----vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~Gl 317 (623)
++.+.+ ++| .....++++.+++...+..+|.. .+.++.=..| + +-.....++.+||+.+ +.
T Consensus 239 ~~~i~~~~l~p~~gT~l~~~~~~~~~~~~~~~~~~r~~l~~~-~i~i~~~~~~-l--~~~~~~~~l~~Gan~~---~~-- 309 (369)
T 1r30_A 239 PESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTS-YVRLSAGREQ-M--NEQTQAMCFMAGANSI---FY-- 309 (369)
T ss_dssp CSEEEEEECCCCTTSTTSSCCCCCHHHHHHHHHHHHHHCTTS-EEEEESSGGG-S--CHHHHHHHHHHTCCEE---EC--
T ss_pred CCEEEeeeeeecCCCcCCCCCCCCHHHHHHHHHHHHHhCCCC-ceEeecchhh-c--ChHHHHHHhhCCCceE---Ee--
Confidence 666554 444 12356788999999999999862 1333311121 2 2334567899999943 33
Q ss_pred cCc---cCcccHHHHHHHHHhcc
Q 006969 318 GER---AGNASLEEVVMAFKCRG 337 (623)
Q Consensus 318 GER---aGNa~lEevv~~L~~~~ 337 (623)
|+| ++|.+.++.+..++..|
T Consensus 310 g~~~~t~~~~~~~~~~~~i~~~g 332 (369)
T 1r30_A 310 GCKLLTTPNPEEDKDLQLFRKLG 332 (369)
T ss_dssp SSBSSSSBCCCHHHHHHHHHHTT
T ss_pred CCeeeCCCCCCHHHHHHHHHHcC
Confidence 443 36788888888887643
No 29
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=96.89 E-value=0.021 Score=54.95 Aligned_cols=167 Identities=21% Similarity=0.186 Sum_probs=96.5
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccc-hhhHHHHHHHHhcCC
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-ERDIKTAWEAVKYAK 176 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~-~~dI~~a~eal~~a~ 176 (623)
.+.++-+++++.|.+ |++.||+|+|...+.-.+.++.|.+..++ .+.+..+...+ .+. -++....+|
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev~~~~~~~~g~~~i~~l~~~~~~--------~~i~~~l~~~di~~~---~~~~a~~~G 77 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIELGTPLIKAEGLSVITAVKKAHPD--------KIVFADMKTMDAGEL---EADIAFKAG 77 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHHHSTT--------SEEEEEEEECSCHHH---HHHHHHHTT
T ss_pred CCHHHHHHHHHHhhc-cCCEEEECcHHHHhhCHHHHHHHHHhCCC--------CeEEEEEEecCccHH---HHHHHHhCC
Confidence 478999999999998 99999999874222223577777765311 13444444333 222 123334469
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEE-eec-
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL-NIP- 254 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I-~l~- 254 (623)
++.|++.....+ +.+.+.++++++.|.. +..+. .+.++++.. ++.+.+.|++.+ ..+
T Consensus 78 ad~v~vh~~~~~---------------~~~~~~~~~~~~~g~~-~gv~~--~s~~~p~~~---~~~~~~~g~d~v~~~~~ 136 (207)
T 3ajx_A 78 ADLVTVLGSADD---------------STIAGAVKAAQAHNKG-VVVDL--IGIEDKATR---AQEVRALGAKFVEMHAG 136 (207)
T ss_dssp CSEEEEETTSCH---------------HHHHHHHHHHHHHTCE-EEEEC--TTCSSHHHH---HHHHHHTTCSEEEEECC
T ss_pred CCEEEEeccCCh---------------HHHHHHHHHHHHcCCc-eEEEE--ecCCChHHH---HHHHHHhCCCEEEEEec
Confidence 998876544332 1233566777777874 43333 133455542 334446689988 432
Q ss_pred Cc---ccccCHHHHHHHHHHHHH-hCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 255 DT---VGITMPTEFGKLIADIKA-NTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 255 DT---vG~~~P~~v~~li~~l~~-~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
-+ .| ..|.+ +.++.++. .+| +.+ +.|-...|.-.++++||+.|
T Consensus 137 ~~~~~~g-~~~~~--~~i~~~~~~~~p------i~v----~GGI~~~~~~~~~~aGad~v 183 (207)
T 3ajx_A 137 LDEQAKP-GFDLN--GLLAAGEKARVP------FSV----AGGVKVATIPAVQKAGAEVA 183 (207)
T ss_dssp HHHHTST-TCCTH--HHHHHHHHHTSC------EEE----ESSCCGGGHHHHHHTTCSEE
T ss_pred ccccccC-CCchH--HHHHHhhCCCCC------EEE----ECCcCHHHHHHHHHcCCCEE
Confidence 11 23 23444 66666665 333 332 12333348888999999976
No 30
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=96.84 E-value=0.045 Score=56.86 Aligned_cols=190 Identities=19% Similarity=0.104 Sum_probs=120.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEec---CCCChhH-HHHHHHHHHHhccccccCCCccceEE-eecccchhhHHHHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGF---PAASKED-FEAVRTIAKEVGNAVDAESGYVPVIC-GLSRCNERDIKTAWEA 171 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGf---P~~s~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~-~~~r~~~~dI~~a~ea 171 (623)
.++.++.++.++.+.+.|++.|-+.. |....++ .+.++.+.+. ++ .++ ..+...++.+ +.
T Consensus 83 ~ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~---------~~--~i~~s~g~l~~e~l----~~ 147 (348)
T 3iix_A 83 RMTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKM---------GV--AVTLSLGEWPREYY----EK 147 (348)
T ss_dssp BCCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTT---------SC--EEEEECCCCCHHHH----HH
T ss_pred eCCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhc---------Cc--eEEEecCCCCHHHH----HH
Confidence 47999999999999999999887742 3322122 2344444332 11 222 1122233434 34
Q ss_pred HhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC-CCCHHHHHHHHHHHHHcCCcE
Q 006969 172 VKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVIKVGATT 250 (623)
Q Consensus 172 l~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~-r~d~e~l~~~~~~~~~aGa~~ 250 (623)
++.+|.+++.+.+-+.+-....+++... ..+...+.++.+++.|+. |.....-+. ..+.+.+.+.++.+.+.|++.
T Consensus 148 L~~ag~~~v~i~let~~~~~~~~i~~~~--~~~~~~~~i~~~~~~Gi~-v~~~~i~G~p~et~e~~~~~~~~l~~l~~~~ 224 (348)
T 3iix_A 148 WKEAGADRYLLRHETANPVLHRKLRPDT--SFENRLNCLLTLKELGYE-TGAGSMVGLPGQTIDDLVDDLLFLKEHDFDM 224 (348)
T ss_dssp HHHHTCCEEECCCBCSCHHHHHHHSTTS--CHHHHHHHHHHHHHTTCE-EEECBEESCTTCCHHHHHHHHHHHHHHTCSE
T ss_pred HHHhCCCEEeeeeeeCCHHHHHHhCCCc--CHHHHHHHHHHHHHhCCe-eccceEEeCCCCCHHHHHHHHHHHHhcCCCE
Confidence 5556999998877666433334444322 356667788999999985 766554444 467888999999999999887
Q ss_pred Eee------cCcc----cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcch---HHHHHHHHHHhCCCEEE
Q 006969 251 LNI------PDTV----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL---STANTIAGACAGARQVE 311 (623)
Q Consensus 251 I~l------~DTv----G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl---AvANslaAv~aGA~~Vd 311 (623)
+.+ ++|- ....++++.++++.+|..+|.. .+++ ..+. +-.-...|+.+||+.|-
T Consensus 225 i~i~~~~p~~gt~l~~~~~~~~~e~~~~~a~~R~~lp~~-~i~~------~~~~~~~~~~~~~~~l~~Gan~i~ 291 (348)
T 3iix_A 225 VGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDS-NIPA------TTAMGTIVPGGREITLRCGANVIM 291 (348)
T ss_dssp ECCEECCCCTTSTTTTSCCCCHHHHHHHHHHHHHHSTTS-BCBC------CHHHHHHSTTHHHHHHTTTCCEEC
T ss_pred EeeeeeecCCCCCcccCCCCCHHHHHHHHHHHHHHCCCC-Cchh------cchhhhcCHHHHHHHHhcCCcEEe
Confidence 553 3442 2346788999999999888863 1222 1121 12235678999999986
No 31
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=96.07 E-value=0.084 Score=52.90 Aligned_cols=197 Identities=17% Similarity=0.236 Sum_probs=103.3
Q ss_pred HHHHHhHcCCCEEEEecCCC---ChhHHHHHHHHHHHhccccccCCCccc-eEEe------ecc----------cc----
Q 006969 106 IARQLAKLGVDIIEAGFPAA---SKEDFEAVRTIAKEVGNAVDAESGYVP-VICG------LSR----------CN---- 161 (623)
Q Consensus 106 Ia~~L~~~Gvd~IEvGfP~~---s~~d~e~v~~i~~~~~~~~~~~~~l~~-~i~~------~~r----------~~---- 161 (623)
.++.+.++|++.||+.++.. ++.+.+.++.+.+.. ++.. .+.. +.. ..
T Consensus 26 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~--------gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r 97 (290)
T 3tva_A 26 HLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAA--------GIQVTVIFGGFDGESYADIPTTARTVGLVPLETR 97 (290)
T ss_dssp CHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHT--------TCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTH
T ss_pred HHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHc--------CCEEEEEeeccCCcccccccccccccCCCCHHHH
Confidence 46667788999999986432 344455565555542 2311 1111 000 01
Q ss_pred ---hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHH
Q 006969 162 ---ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYE 238 (623)
Q Consensus 162 ---~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~ 238 (623)
.+.++++++..+..|.+.|.+.....+-. .....+...+.+.++.++|++.|+. +.+-+. ..+++.+.+
T Consensus 98 ~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~----~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~---~~~~~~~~~ 169 (290)
T 3tva_A 98 ASRVAEMKEISDFASWVGCPAIGLHIGFVPES----SSPDYSELVRVTQDLLTHAANHGQA-VHLETG---QESADHLLE 169 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCCCCCCT----TSHHHHHHHHHHHHHHHHHHTTTCE-EEEECC---SSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEcCCCCccc----chHHHHHHHHHHHHHHHHHHHcCCE-EEEecC---CCCHHHHHH
Confidence 12344555555556888887753321100 1112456677778888889999874 555332 246777777
Q ss_pred HHHHHHHcCCcEEee-cCcccccC-H-HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccC
Q 006969 239 ILGEVIKVGATTLNI-PDTVGITM-P-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 315 (623)
Q Consensus 239 ~~~~~~~aGa~~I~l-~DTvG~~~-P-~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~ 315 (623)
+++.+ +...+.+ -||.=... - ....+.++.+..+ ...+|.||..+--. -.-|..+-.-.
T Consensus 170 l~~~~---~~~~~g~~~D~~h~~~~g~~d~~~~l~~~~~~-------i~~vHl~D~~~~~~------~~~g~~~~~~~-- 231 (290)
T 3tva_A 170 FIEDV---NRPNLGINFDPANMILYGTGNPIEALRKVARY-------VRSIHCKDALWAPV------NERGKSWGQEV-- 231 (290)
T ss_dssp HHHHH---CCTTEEEEECHHHHHHTTCSCHHHHHHHHGGG-------EEEEEECEEECCCG------GGBTTBCCEEE--
T ss_pred HHHhc---CCCCEEEEeccHHHHHhCCCCHHHHHHHHHhh-------heEEEeccccCCCc------ccccccccccc--
Confidence 77655 4333333 36532221 0 1233444444332 36889998643210 00121111112
Q ss_pred CccCccCcccHHHHHHHHHhccc
Q 006969 316 GIGERAGNASLEEVVMAFKCRGE 338 (623)
Q Consensus 316 GlGERaGNa~lEevv~~L~~~~~ 338 (623)
-+| .|..+..+++..|+..+.
T Consensus 232 ~~G--~G~id~~~~~~~L~~~gy 252 (290)
T 3tva_A 232 ALG--TGDVGMEAYLTTLWEIGY 252 (290)
T ss_dssp STT--SSSSCHHHHHHHHHHTTC
T ss_pred CCC--CceeCHHHHHHHHHHcCC
Confidence 233 488999999999998663
No 32
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=95.97 E-value=0.2 Score=49.47 Aligned_cols=168 Identities=17% Similarity=0.169 Sum_probs=94.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhH----------------------HHHHHHHHHHhccccccCCCccceE
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKED----------------------FEAVRTIAKEVGNAVDAESGYVPVI 154 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d----------------------~e~v~~i~~~~~~~~~~~~~l~~~i 154 (623)
..+.++-+++++.|.+. +|.||++.|.+.|.. ++.++.+.+.. . .|..
T Consensus 15 ~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~--------~-~pv~ 84 (248)
T 1geq_A 15 DPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS--------S-TPIV 84 (248)
T ss_dssp SSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC--------C-CCEE
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC--------C-CCEE
Confidence 34557889999999999 999999988654321 23344443321 1 1322
Q ss_pred Eeecccc-------hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccC
Q 006969 155 CGLSRCN-------ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED 227 (623)
Q Consensus 155 ~~~~r~~-------~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ed 227 (623)
.....+ .+.++.++++ |++.|++..-. . +...+.+++++++|.+ +.+...
T Consensus 85 -~~~~~~~~~~~~~~~~~~~~~~~----Gad~v~~~~~~------------~----~~~~~~~~~~~~~g~~-~~~~i~- 141 (248)
T 1geq_A 85 -LMTYYNPIYRAGVRNFLAEAKAS----GVDGILVVDLP------------V----FHAKEFTEIAREEGIK-TVFLAA- 141 (248)
T ss_dssp -EEECHHHHHHHCHHHHHHHHHHH----TCCEEEETTCC------------G----GGHHHHHHHHHHHTCE-EEEEEC-
T ss_pred -EEeccchhhhcCHHHHHHHHHHC----CCCEEEECCCC------------h----hhHHHHHHHHHHhCCC-eEEEEC-
Confidence 222223 3455555554 99998874211 1 1244677888888875 433221
Q ss_pred CCCCCHHHHHHHHHHHHHcCCc-EEeecCccc---cc--CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH-HHHH
Q 006969 228 AGRSDRKFLYEILGEVIKVGAT-TLNIPDTVG---IT--MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST-ANTI 300 (623)
Q Consensus 228 a~r~d~e~l~~~~~~~~~aGa~-~I~l~DTvG---~~--~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv-ANsl 300 (623)
..+..+.+..+.. +++ .|++-...| .. .+....++++.+++.+. ++|.+ +.|... .|..
T Consensus 142 -~~t~~e~~~~~~~-----~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~----~pi~~----~GGI~~~e~i~ 207 (248)
T 1geq_A 142 -PNTPDERLKVIDD-----MTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICR----NKVAV----GFGVSKREHVV 207 (248)
T ss_dssp -TTCCHHHHHHHHH-----HCSSEEEEECCC-------CCCHHHHHHHHHHHHHCS----SCEEE----ESCCCSHHHHH
T ss_pred -CCCHHHHHHHHHh-----cCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhcC----CCEEE----EeecCCHHHHH
Confidence 1244444433332 245 555444433 22 23456678888888652 33332 356666 6777
Q ss_pred HHHHhCCCEEE
Q 006969 301 AGACAGARQVE 311 (623)
Q Consensus 301 aAv~aGA~~Vd 311 (623)
..+.+||+.|-
T Consensus 208 ~~~~~Gad~vi 218 (248)
T 1geq_A 208 SLLKEGANGVV 218 (248)
T ss_dssp HHHHTTCSEEE
T ss_pred HHHHcCCCEEE
Confidence 77799999874
No 33
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=95.67 E-value=0.8 Score=47.32 Aligned_cols=226 Identities=17% Similarity=0.113 Sum_probs=131.4
Q ss_pred HHHHhHcCCCEEEE-ec---------CCCChh---H-HHHHHHHHHHhccccccCCCccceEEe----ecccchhhHHHH
Q 006969 107 ARQLAKLGVDIIEA-GF---------PAASKE---D-FEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKTA 168 (623)
Q Consensus 107 a~~L~~~Gvd~IEv-Gf---------P~~s~~---d-~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~a 168 (623)
++.++++||+.|=+ |+ |-..+- | .+.++.+++...- -.|.++. ++ ....+.+.
T Consensus 38 A~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~-------~~PviaD~d~Gyg--~~~~v~~~ 108 (307)
T 3lye_A 38 ARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPF-------GPPLIADMDTGYG--GPIMVART 108 (307)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTT-------SCCEEEECTTCSS--SHHHHHHH
T ss_pred HHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCC-------CCcEEEECCCCCC--CHHHHHHH
Confidence 67788899999988 43 432221 1 3444555442110 0133332 33 34556666
Q ss_pred HHHHhcCCCCEEEEEecCCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC-CCCHHHHHHHHHHHH
Q 006969 169 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVI 244 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~Sd~---h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~-r~d~e~l~~~~~~~~ 244 (623)
.+.+..+|+..|+|-..+++- |+..+-=.+.+|..++++.+++.++..|.+.+...=.|+. ....+..++=+++..
T Consensus 109 v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~ 188 (307)
T 3lye_A 109 VEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIERLRAAR 188 (307)
T ss_dssp HHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHHHHH
Confidence 666777899999998887653 3332222478898999888877777667542322111221 123567777778888
Q ss_pred HcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCc-chHHHHHHHHHHhCCCEEEeccCCccCccCc
Q 006969 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDL-GLSTANTIAGACAGARQVEVTINGIGERAGN 323 (623)
Q Consensus 245 ~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~-GlAvANslaAv~aGA~~Vd~Tv~GlGERaGN 323 (623)
++|||.|.+. |...|+++.++.+.+. .+| +.+-+-..... .+ ..-.--+.|+++|- .....-|+-.
T Consensus 189 eAGAD~ifi~---~~~~~~~~~~i~~~~~-~~P----v~~n~~~~g~~p~~---t~~eL~~lGv~~v~--~~~~~~raa~ 255 (307)
T 3lye_A 189 DEGADVGLLE---GFRSKEQAAAAVAALA-PWP----LLLNSVENGHSPLI---TVEEAKAMGFRIMI--FSFATLAPAY 255 (307)
T ss_dssp HTTCSEEEEC---CCSCHHHHHHHHHHHT-TSC----BEEEEETTSSSCCC---CHHHHHHHTCSEEE--EETTTHHHHH
T ss_pred HCCCCEEEec---CCCCHHHHHHHHHHcc-CCc----eeEEeecCCCCCCC---CHHHHHHcCCeEEE--EChHHHHHHH
Confidence 9999999987 6778999998888875 233 22222222111 12 12344456999983 2222346777
Q ss_pred ccHHHHHHHHHhcccccccccccCCChhHHHHHH
Q 006969 324 ASLEEVVMAFKCRGEHILGGLYTGINTRHIVMAS 357 (623)
Q Consensus 324 a~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s 357 (623)
..+++.+..|...|.. +.+..+....|+++-
T Consensus 256 ~a~~~~~~~l~~~g~~---~~~~~~~~~el~~~~ 286 (307)
T 3lye_A 256 AAIRETLVRLRDHGVV---GTPDGITPVRLFEVC 286 (307)
T ss_dssp HHHHHHHHHHHHHSCC---CCCTTCCHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCC---CccccCCHHHHHHhc
Confidence 7888888888765531 223334555555543
No 34
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=95.65 E-value=0.17 Score=51.61 Aligned_cols=202 Identities=9% Similarity=0.050 Sum_probs=105.9
Q ss_pred HHHHHHhHcCCCEEEEecCCCChh--------HHHHHHHHHHHhccccccCCCccc-eEEe---------ecccch----
Q 006969 105 DIARQLAKLGVDIIEAGFPAASKE--------DFEAVRTIAKEVGNAVDAESGYVP-VICG---------LSRCNE---- 162 (623)
Q Consensus 105 ~Ia~~L~~~Gvd~IEvGfP~~s~~--------d~e~v~~i~~~~~~~~~~~~~l~~-~i~~---------~~r~~~---- 162 (623)
.+.+.+.++|++.||+......+. +.+.++.+.+.. |+.. .+.. ++...+
T Consensus 39 ~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------Gl~i~~~~~~~~~~~~~~l~~~d~~~r~ 110 (316)
T 3qxb_A 39 LAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKA--------GLTIESTFGGLASYTYNHFLAPTLELQS 110 (316)
T ss_dssp HHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHT--------TCEEEEEECCHHHHTSCBTTCSSHHHHH
T ss_pred HHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHc--------CCeEEEeeccccccccccCCCCCHHHHH
Confidence 355677899999999975322221 344444444432 3321 1111 111111
Q ss_pred ---hhHHHHHHHHhcCCCCEEEEEecC-C-HHHH-HHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc--cC-CCCCCH
Q 006969 163 ---RDIKTAWEAVKYAKRPRIHTFIAT-S-GIHM-EHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP--ED-AGRSDR 233 (623)
Q Consensus 163 ---~dI~~a~eal~~a~~~~v~i~~~~-S-d~h~-~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~--ed-a~r~d~ 233 (623)
+.++++++.....|.+.|.+.... + .... ........+..++.+.++.++|++.|+..+.+-+ .. ..-.++
T Consensus 111 ~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~lE~~~~~~~~~~t~ 190 (316)
T 3qxb_A 111 LGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGLSMLYVEPVPLATEFPSSA 190 (316)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCTTBSSCSH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCeEEEEEecCCccccCCCH
Confidence 234456666666788887653322 1 0000 0000012345667777888899999974244433 11 123567
Q ss_pred HHHHHHHHHHHHcCCcEEeec-CcccccC-----H-HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC
Q 006969 234 KFLYEILGEVIKVGATTLNIP-DTVGITM-----P-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG 306 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l~-DTvG~~~-----P-~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG 306 (623)
+.+.++++.+.+.+...+.++ ||.=... - ..+.+.++.+..+ ...+|.++..+-
T Consensus 191 ~~~~~l~~~v~~~~~~~vg~~lD~~H~~~~~~~~~~~d~~~~l~~~~~~-------i~~vHlkD~~~~------------ 251 (316)
T 3qxb_A 191 ADAARLMADLDGRTEIPVRLLVDWGHALFEPLFGPEADMDHWMDLCQPW-------IAAYHIQQTDGQ------------ 251 (316)
T ss_dssp HHHHHHHHHHTTTSSSCEEEEEEHHHHTCHHHHGGGCSHHHHHHHHGGG-------EEEEEECBCCSS------------
T ss_pred HHHHHHHHHHhccCCCCEEEEEEccchheecccccccCHHHHHHHHHhh-------heEEeeecCCCC------------
Confidence 888888887754455555444 6632222 0 1233344444332 358999986551
Q ss_pred CCEEEeccCCccCccCcccHHHHHHHHHhccc
Q 006969 307 ARQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (623)
Q Consensus 307 A~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~ 338 (623)
.+. +-.+ .|+ |+.+.+.++..|+..+.
T Consensus 252 ~d~-h~~~--~G~--G~id~~~i~~~L~~~gy 278 (316)
T 3qxb_A 252 LDR-HWSF--TQP--GVVTPQRLQDFWDKYAL 278 (316)
T ss_dssp SCC-CBCT--TSC--SSCCHHHHHHHHHHTTC
T ss_pred cCc-cCCC--CCC--ceECHHHHHHHHHHcCC
Confidence 110 1111 244 89999999999998763
No 35
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=95.50 E-value=0.042 Score=54.72 Aligned_cols=188 Identities=12% Similarity=0.056 Sum_probs=103.9
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccc-eEEe----ecc-------------
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVP-VICG----LSR------------- 159 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~-~i~~----~~r------------- 159 (623)
++.++. ++.+.++|++.||+.+|. +.+.+.++.+.+.. |+.. .+.. |..
T Consensus 23 ~~~~~~---l~~~~~~G~~~vEl~~~~--~~~~~~~~~~l~~~--------gl~~~~~~~~~~~~~~~~~~~~~~~~~r~ 89 (269)
T 3ngf_A 23 VPFLER---FRLAAEAGFGGVEFLFPY--DFDADVIARELKQH--------NLTQVLFNMPPGDWAAGERGMAAISGREQ 89 (269)
T ss_dssp SCHHHH---HHHHHHTTCSEEECSCCT--TSCHHHHHHHHHHT--------TCEEEEEECCCSCTTTTCCBCTTCTTCHH
T ss_pred CCHHHH---HHHHHHcCCCEEEecCCc--cCCHHHHHHHHHHc--------CCcEEEEecCCCccccCCCCcCCCccHHH
Confidence 566654 555677899999998774 33456666665543 2211 1111 100
Q ss_pred cchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCH----HHHHHHHHHHHHHHHHcCCCeEEEcccC------CC
Q 006969 160 CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTK----QQVVEIARSMVKFARSLGCDDVEFSPED------AG 229 (623)
Q Consensus 160 ~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~----ee~l~~~~~~v~~ak~~G~~~V~f~~ed------a~ 229 (623)
...+.++++++..+..|.+.|.+... .+ -+.+. +...+.+.++.++|++.|+. +.+-+.. ..
T Consensus 90 ~~~~~~~~~i~~A~~lGa~~v~~~~g-~~------~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~n~~~~~~~~ 161 (269)
T 3ngf_A 90 EFRDNVDIALHYALALDCRTLHAMSG-IT------EGLDRKACEETFIENFRYAADKLAPHGIT-VLVEPLNTRNMPGYF 161 (269)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEECCBC-BC------TTSCHHHHHHHHHHHHHHHHHHHGGGTCE-EEECCCCTTTSTTBS
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEccC-CC------CCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EEEeeCCcccCccch
Confidence 01134556677667779998876543 21 12233 34555566777888888874 5553311 12
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeec-CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCC
Q 006969 230 RSDRKFLYEILGEVIKVGATTLNIP-DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 308 (623)
Q Consensus 230 r~d~e~l~~~~~~~~~aGa~~I~l~-DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~ 308 (623)
-.+++.+.++++.+ +...+.++ ||.=...-. .+....++...+ -...+|++|..|-
T Consensus 162 ~~~~~~~~~l~~~v---~~~~vg~~~D~~h~~~~g--~d~~~~l~~~~~----~i~~vHl~D~~~r-------------- 218 (269)
T 3ngf_A 162 IVHQLEAVGLVKRV---NRPNVAVQLDLYHAQIMD--GDLTRLIEKMNG----AFSHVQIASVPDR-------------- 218 (269)
T ss_dssp CCCHHHHHHHHHHH---CCTTEEEEEEHHHHHHHT--CCHHHHHHHTTT----SEEEEEECCTTTC--------------
T ss_pred hcCHHHHHHHHHHh---CCCCCCeEEEhhhHHhhC--CCHHHHHHHhhh----hEEEEEEecCCCC--------------
Confidence 34677777777765 43333333 543221110 022333333222 2468999997531
Q ss_pred EEEeccCCccCccCcccHHHHHHHHHhcc
Q 006969 309 QVEVTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 309 ~Vd~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
. -.| .|+.+..+++..|+..|
T Consensus 219 ----~--~~G--~G~id~~~~~~~L~~~g 239 (269)
T 3ngf_A 219 ----H--EPD--EGELNYPYLFSVLESVG 239 (269)
T ss_dssp ----C--CTT--SSSBCHHHHHHHHHHTT
T ss_pred ----C--CCC--CCccCHHHHHHHHHHcC
Confidence 1 234 58999999999999865
No 36
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=95.46 E-value=0.59 Score=48.22 Aligned_cols=225 Identities=17% Similarity=0.136 Sum_probs=129.5
Q ss_pred HHHHhHcCCCEEEE-ec---------CCCChh---H-HHHHHHHHHHhccccccCCCccceEEe----ecccchhhHHHH
Q 006969 107 ARQLAKLGVDIIEA-GF---------PAASKE---D-FEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKTA 168 (623)
Q Consensus 107 a~~L~~~Gvd~IEv-Gf---------P~~s~~---d-~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~a 168 (623)
++.++++||+.|=+ |+ |-..+- | ...++.|++...+ .|.++. ++ ....+.++
T Consensus 31 A~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~--------~PviaD~d~Gyg--~~~~v~~t 100 (302)
T 3fa4_A 31 ARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPS--------TPVIADADTGYG--GPIMVART 100 (302)
T ss_dssp HHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTT--------SCEEEECTTTTS--SHHHHHHH
T ss_pred HHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccC--------CCEEEECCCCCC--CHHHHHHH
Confidence 67788899999988 42 432221 1 2444555442111 133332 33 34556666
Q ss_pred HHHHhcCCCCEEEEEecCCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC-CCCHHHHHHHHHHHH
Q 006969 169 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVI 244 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~Sd~---h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~-r~d~e~l~~~~~~~~ 244 (623)
.+.+..+|+..|+|-..+.+- |+..+-=.+.+|.+++++.+++.+++.|.+.+...=-|+. ....+..++=+++..
T Consensus 101 v~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~ 180 (302)
T 3fa4_A 101 TEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRAAR 180 (302)
T ss_dssp HHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHHHH
Confidence 666777899999998887663 3221112478999999988877776666552222111221 124567777788889
Q ss_pred HcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccC-ccCc
Q 006969 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGE-RAGN 323 (623)
Q Consensus 245 ~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGE-RaGN 323 (623)
++|||.|.++ |..+|+++.++.+.+.. +| +.+-+-.......- ..-.--+.|+++|- .|..- |+-+
T Consensus 181 eAGAD~ifi~---g~~~~~ei~~~~~~~~~-~P----l~~n~~~~g~~p~~--~~~eL~~lGv~~v~---~~~~~~raa~ 247 (302)
T 3fa4_A 181 DAGADVGFLE---GITSREMARQVIQDLAG-WP----LLLNMVEHGATPSI--SAAEAKEMGFRIII---FPFAALGPAV 247 (302)
T ss_dssp TTTCSEEEET---TCCCHHHHHHHHHHTTT-SC----EEEECCTTSSSCCC--CHHHHHHHTCSEEE---ETTTTHHHHH
T ss_pred HcCCCEEeec---CCCCHHHHHHHHHHhcC-Cc----eeEEEecCCCCCCC--CHHHHHHcCCCEEE---EchHHHHHHH
Confidence 9999999885 46788888887777641 22 22222222222111 22334456998884 33333 7777
Q ss_pred ccHHHHHHHHHhcccccccccccCCChhHHHHHH
Q 006969 324 ASLEEVVMAFKCRGEHILGGLYTGINTRHIVMAS 357 (623)
Q Consensus 324 a~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s 357 (623)
..+++.+..|...|.. +.+..+....|+++-
T Consensus 248 ~A~~~~~~~i~~~g~~---~~~~~~~~~el~~~~ 278 (302)
T 3fa4_A 248 AAMREAMEKLKRDGIP---GLDKEMTPQMLFRVC 278 (302)
T ss_dssp HHHHHHHHHHHHHSSC---CCCTTCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCC---CcccCCCHHHHHHHc
Confidence 8888888888765531 223334455555443
No 37
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=95.36 E-value=0.22 Score=48.96 Aligned_cols=155 Identities=20% Similarity=0.234 Sum_probs=100.1
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCC
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~ 177 (623)
.+.++-+.+++.|.+-|++.||+.+ .+|.-.+.++.+++..+.. .|-+=+-.+.++.+.+.++ |.
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~--~t~~a~~~I~~l~~~~p~~---------~IGAGTVlt~~~a~~ai~A----GA 86 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTL--RTEAGLAAISAIKKAVPEA---------IVGAGTVCTADDFQKAIDA----GA 86 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEET--TSTTHHHHHHHHHHHCTTS---------EEEEECCCSHHHHHHHHHH----TC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeC--CCccHHHHHHHHHHHCCCC---------eEeeccccCHHHHHHHHHc----CC
Confidence 5678899999999999999999976 4566678899998865321 2222233467888888876 77
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC--e-EEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 006969 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD--D-VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 254 (623)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~--~-V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~ 254 (623)
+-|-. |.. + .+.+++++++|++ . =-+-| +-.+++.+ ..+.++|+|.|.+
T Consensus 87 ~fivs--P~~----------~--------~evi~~~~~~~v~~~~~~~~~P---G~~TptE~----~~A~~~Gad~vK~- 138 (217)
T 3lab_A 87 QFIVS--PGL----------T--------PELIEKAKQVKLDGQWQGVFLP---GVATASEV----MIAAQAGITQLKC- 138 (217)
T ss_dssp SEEEE--SSC----------C--------HHHHHHHHHHHHHCSCCCEEEE---EECSHHHH----HHHHHTTCCEEEE-
T ss_pred CEEEe--CCC----------c--------HHHHHHHHHcCCCccCCCeEeC---CCCCHHHH----HHHHHcCCCEEEE-
Confidence 76532 321 1 1566778877650 0 01223 11344433 2357899999875
Q ss_pred CcccccCHHHH---HHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCC
Q 006969 255 DTVGITMPTEF---GKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 308 (623)
Q Consensus 255 DTvG~~~P~~v---~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~ 308 (623)
.|.+. .++++.++.-+|+ +++-.= -|....|.-..+.+|+.
T Consensus 139 ------FPa~~~gG~~~lkal~~p~p~---i~~~pt----GGI~~~N~~~~l~aGa~ 182 (217)
T 3lab_A 139 ------FPASAIGGAKLLKAWSGPFPD---IQFCPT----GGISKDNYKEYLGLPNV 182 (217)
T ss_dssp ------TTTTTTTHHHHHHHHHTTCTT---CEEEEB----SSCCTTTHHHHHHSTTB
T ss_pred ------CccccccCHHHHHHHHhhhcC---ceEEEe----CCCCHHHHHHHHHCCCE
Confidence 45442 3788999988875 445433 33445688888999974
No 38
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=95.35 E-value=0.26 Score=51.04 Aligned_cols=141 Identities=17% Similarity=0.187 Sum_probs=85.3
Q ss_pred eEEEeCCCc---cc--CCCCCCCCCH-HHHHHHHHHHhHcCCCEEEEec----CCCC---h-hHHHHHHHHHHHhccccc
Q 006969 80 VRVFDTTLR---DG--EQSPGATLTS-KEKLDIARQLAKLGVDIIEAGF----PAAS---K-EDFEAVRTIAKEVGNAVD 145 (623)
Q Consensus 80 v~I~DtTLR---DG--~Q~~g~~~t~-e~Kl~Ia~~L~~~Gvd~IEvGf----P~~s---~-~d~e~v~~i~~~~~~~~~ 145 (623)
+.|+|+|.= || ++. .+. +.-++.++.+.+.|.|+|.+|. |.+. + ++.+.++.+.+...
T Consensus 51 m~I~n~tpdsf~d~i~~~~----~~~~~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~---- 122 (310)
T 2h9a_B 51 LEVFDTPPTDWPDILVEPF----KDVINDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAID---- 122 (310)
T ss_dssp EEEESSCCSSCCHHHHGGG----TTTTTCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCS----
T ss_pred EEEeeCCCcccchhhhhhh----ccHHHHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCC----
Confidence 679999874 66 432 222 5678889999999999999996 5432 2 33567777766421
Q ss_pred cCCCccceEEeecc----cchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeE
Q 006969 146 AESGYVPVICGLSR----CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDV 221 (623)
Q Consensus 146 ~~~~l~~~i~~~~r----~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V 221 (623)
+| |+.+-- .+.+-++.++++..+ +.+.| .++|.. ...++...++++|.. |
T Consensus 123 -----vp-lsI~DT~~~~~~~~V~eaal~aga~-~k~iI---Ndvs~~---------------~~~~~~~~aa~~g~~-v 176 (310)
T 2h9a_B 123 -----VP-LMIIGCGVEEKDAEIFPVIGEALSG-RNCLL---SSATKD---------------NYKPIVATCMVHGHS-V 176 (310)
T ss_dssp -----SC-EEEECCSCHHHHHHHHHHHHHHTTT-SCCEE---EEECTT---------------THHHHHHHHHHHTCE-E
T ss_pred -----ce-EEEECCCCCCCCHHHHHHHHHhCCC-CCCEE---EECCCC---------------ccHHHHHHHHHhCCC-E
Confidence 12 332233 345556777776211 11233 344421 123556677788875 4
Q ss_pred EEcccCCCCCCHHHHHHHHHHHHHcCC--cEEeecCccc
Q 006969 222 EFSPEDAGRSDRKFLYEILGEVIKVGA--TTLNIPDTVG 258 (623)
Q Consensus 222 ~f~~eda~r~d~e~l~~~~~~~~~aGa--~~I~l~DTvG 258 (623)
...+.. |.+++.+.++.+.++|. +.|.|==.+|
T Consensus 177 v~m~~~----dv~~l~~~~~~a~~~Gi~~e~IilDPg~g 211 (310)
T 2h9a_B 177 VASAPL----DINLSKQLNIMIMEMNLAPNRIIMDPLIG 211 (310)
T ss_dssp EEECSS----CHHHHHHHHHHHHTTTCCGGGEEEECCCC
T ss_pred EEEChh----HHHHHHHHHHHHHHCCCChhhEEEeCCCc
Confidence 443321 57999999999999998 4565533334
No 39
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=95.32 E-value=0.67 Score=47.62 Aligned_cols=162 Identities=19% Similarity=0.276 Sum_probs=86.8
Q ss_pred eEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEec----CCCC----hhHHHHHHHHHHHhccccccCCCcc
Q 006969 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDAESGYV 151 (623)
Q Consensus 80 v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGf----P~~s----~~d~e~v~~i~~~~~~~~~~~~~l~ 151 (623)
+=|+-+|. |-..--|..++.+.-++.++.+.+.|-|+|.+|. |++. ++|.+.+..+.+.+... +.
T Consensus 32 MGIlNvTP-DSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~-----~v- 104 (294)
T 2dqw_A 32 LGVLNLTP-DSFSDGGRYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL-----GV- 104 (294)
T ss_dssp EEEEECCC--------------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT-----CS-
T ss_pred EEEEeCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC-----CC-
Confidence 45666665 3222223446788889999999999999999996 4322 23454444444433211 11
Q ss_pred ceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccC-CCC
Q 006969 152 PVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED-AGR 230 (623)
Q Consensus 152 ~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ed-a~r 230 (623)
| |+ .--.+.+-+++|+++ |.+.| ..+|-. .. .++.+.++++|+. |...+.+ +..
T Consensus 105 p-iS-IDT~~~~Va~aAl~a----Ga~iI---NdVsg~-------~d--------~~m~~v~a~~~~~-vVlmh~~eG~p 159 (294)
T 2dqw_A 105 P-VS-VDTRKPEVAEEALKL----GAHLL---NDVTGL-------RD--------ERMVALAARHGVA-AVVMHMPVPDP 159 (294)
T ss_dssp C-EE-EECSCHHHHHHHHHH----TCSEE---ECSSCS-------CC--------HHHHHHHHHHTCE-EEEECCSSSCT
T ss_pred e-EE-EECCCHHHHHHHHHh----CCCEE---EECCCC-------CC--------hHHHHHHHHhCCC-EEEEcCCCCCC
Confidence 1 22 222356667777776 77755 354421 11 1455667778875 5554433 222
Q ss_pred CC--------------HHHHHHHHHHHHHcCCcEEeecCc-ccccC-HHHHHHHHHHHHH
Q 006969 231 SD--------------RKFLYEILGEVIKVGATTLNIPDT-VGITM-PTEFGKLIADIKA 274 (623)
Q Consensus 231 ~d--------------~e~l~~~~~~~~~aGa~~I~l~DT-vG~~~-P~~v~~li~~l~~ 274 (623)
.+ .+++.+.++.+.++|...|.| |. +|... .++-.++++.+++
T Consensus 160 ~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~Iil-DPG~Gf~kt~~~n~~ll~~l~~ 218 (294)
T 2dqw_A 160 ATMMAHARYRDVVAEVKAFLEAQARRALSAGVPQVVL-DPGFGFGKLLEHNLALLRRLDE 218 (294)
T ss_dssp TTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCSCEEE-ECCTTSSCCHHHHHHHHHTHHH
T ss_pred ccccccCccccHHHHHHHHHHHHHHHHHHCCCCcEEE-cCCCCcccCHHHHHHHHHHHHH
Confidence 22 468888889999999885554 43 24333 5666677777654
No 40
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.27 E-value=0.14 Score=50.94 Aligned_cols=153 Identities=17% Similarity=0.205 Sum_probs=100.3
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCC
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~ 177 (623)
-+.++-+++++.|.+.|++.||+.+ .+|...+.++++++..+.. .+-+=+-...++.+.++++ |.
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~--~t~~a~e~I~~l~~~~~~~---------~iGaGTVlt~~~a~~Ai~A----GA 107 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITF--RSDAAVEAIRLLRQAQPEM---------LIGAGTILNGEQALAAKEA----GA 107 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEET--TSTTHHHHHHHHHHHCTTC---------EEEEECCCSHHHHHHHHHH----TC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeC--CCCCHHHHHHHHHHhCCCC---------EEeECCcCCHHHHHHHHHc----CC
Confidence 4678899999999999999999976 3566678899888865321 1111122356777877776 88
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcc
Q 006969 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV 257 (623)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTv 257 (623)
+-|+. |.. + .+.++++++.|+. +-| + -.++..+. ++.++|+|.|.+
T Consensus 108 ~fIvs--P~~----------~--------~~vi~~~~~~gi~---~ip-G--v~TptEi~----~A~~~Gad~vK~---- 153 (232)
T 4e38_A 108 TFVVS--PGF----------N--------PNTVRACQEIGID---IVP-G--VNNPSTVE----AALEMGLTTLKF---- 153 (232)
T ss_dssp SEEEC--SSC----------C--------HHHHHHHHHHTCE---EEC-E--ECSHHHHH----HHHHTTCCEEEE----
T ss_pred CEEEe--CCC----------C--------HHHHHHHHHcCCC---EEc-C--CCCHHHHH----HHHHcCCCEEEE----
Confidence 87753 221 1 2566778888864 222 1 12444433 446899998876
Q ss_pred cccCHHHH---HHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE
Q 006969 258 GITMPTEF---GKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 309 (623)
Q Consensus 258 G~~~P~~v---~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 309 (623)
.|.+. -++++.++.-+|+ +++-. .-|....|.-..+.+|+..
T Consensus 154 ---FPa~~~gG~~~lkal~~p~p~---ip~~p----tGGI~~~n~~~~l~aGa~~ 198 (232)
T 4e38_A 154 ---FPAEASGGISMVKSLVGPYGD---IRLMP----TGGITPSNIDNYLAIPQVL 198 (232)
T ss_dssp ---CSTTTTTHHHHHHHHHTTCTT---CEEEE----BSSCCTTTHHHHHTSTTBC
T ss_pred ---CcCccccCHHHHHHHHHHhcC---CCeee----EcCCCHHHHHHHHHCCCeE
Confidence 33221 2788888887775 44543 3455567899999999864
No 41
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=95.12 E-value=0.7 Score=45.36 Aligned_cols=197 Identities=10% Similarity=0.015 Sum_probs=108.3
Q ss_pred ceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecC----CCChhHHHHHHHHHHHhccccccCCCcc-ce
Q 006969 79 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFP----AASKEDFEAVRTIAKEVGNAVDAESGYV-PV 153 (623)
Q Consensus 79 ~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP----~~s~~d~e~v~~i~~~~~~~~~~~~~l~-~~ 153 (623)
++-+.-.|+|+ ++.++ .++.+.++|++.||+... ..++++.+.++.+.+.. ++. ..
T Consensus 19 klg~~~~~~~~--------~~~~~---~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~--------gl~i~~ 79 (257)
T 3lmz_A 19 HLGMAGYTFVN--------FDLDT---TLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAH--------KVTGYA 79 (257)
T ss_dssp EEEECGGGGTT--------SCHHH---HHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHT--------TCEEEE
T ss_pred EEEEEEEeecC--------CCHHH---HHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHc--------CCeEEE
Confidence 35555666665 35555 455667789999999642 22455556666655542 231 12
Q ss_pred EEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc---CCCC
Q 006969 154 ICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE---DAGR 230 (623)
Q Consensus 154 i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e---da~r 230 (623)
+........+.++++++..+..|.+.|.+... . +.+.++.++|++.|+. +.+-+. ...-
T Consensus 80 ~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~--------------~---~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~ 141 (257)
T 3lmz_A 80 VGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPN--------------Y---ELLPYVDKKVKEYDFH-YAIHLHGPDIKTY 141 (257)
T ss_dssp EEEEEECSHHHHHHHHHHHHHHTCSEEEEEEC--------------G---GGHHHHHHHHHHHTCE-EEEECCCTTCSSS
T ss_pred EeccccCCHHHHHHHHHHHHHhCCCEEEecCC--------------H---HHHHHHHHHHHHcCCE-EEEecCCCccccc
Confidence 22222224456666666666668888876422 1 2344677888899984 555332 2222
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCcccccCH-HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE
Q 006969 231 SDRKFLYEILGEVIKVGATTLNIPDTVGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 309 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P-~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 309 (623)
.+++.+.++++. .+...=..-||.=...- ....+.++.+..+ ...+|.+|..+- +-..
T Consensus 142 ~~~~~~~~ll~~---~~p~vg~~~D~~h~~~~g~d~~~~l~~~~~~-------i~~vHl~D~~~~-----------~~~~ 200 (257)
T 3lmz_A 142 PDATDVWVHTKD---LDPRIGMCLDVGHDLRNGCDPVADLKKYHTR-------VFDMHIKDVTDS-----------SKAG 200 (257)
T ss_dssp CSHHHHHHHHTT---SCTTEEEEEEHHHHHHTTCCHHHHHHHHGGG-------EEEEEECEESCS-----------STTC
T ss_pred CCHHHHHHHHHh---CCCCccEEEchhhHHHcCCCHHHHHHHhhcc-------eeEEeecccccc-----------cCCC
Confidence 467777777652 23322223355322110 0123334433322 468899987651 1111
Q ss_pred EEeccCCccCccCcccHHHHHHHHHhccc
Q 006969 310 VEVTINGIGERAGNASLEEVVMAFKCRGE 338 (623)
Q Consensus 310 Vd~Tv~GlGERaGNa~lEevv~~L~~~~~ 338 (623)
- -.-+| .|+.+...++..|+..+.
T Consensus 201 ~---~~~~G--~G~id~~~~~~~L~~~gy 224 (257)
T 3lmz_A 201 V---GIEIG--RGKIDFPALIRMMREVNY 224 (257)
T ss_dssp C---EECTT--SSSCCHHHHHHHHHHTTC
T ss_pred C---ccccC--CCccCHHHHHHHHHHcCC
Confidence 1 11234 489999999999998663
No 42
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=95.11 E-value=0.28 Score=50.36 Aligned_cols=189 Identities=12% Similarity=0.125 Sum_probs=100.1
Q ss_pred HHHHHHhHcCCCEEEEecCCCC--h-----hHHHHHHHHHHHhccccccCCCccce-EEe---ecc------cch-----
Q 006969 105 DIARQLAKLGVDIIEAGFPAAS--K-----EDFEAVRTIAKEVGNAVDAESGYVPV-ICG---LSR------CNE----- 162 (623)
Q Consensus 105 ~Ia~~L~~~Gvd~IEvGfP~~s--~-----~d~e~v~~i~~~~~~~~~~~~~l~~~-i~~---~~r------~~~----- 162 (623)
+.++.+.++|++.||+...... + .+.+.++.+.+.. |+.+. +.+ +.+ ...
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~--------gL~~~~i~~~~~~~~~~~l~~~d~~~r~~ 106 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSE--------GLENVKISTNVGATRTFDPSSNYPEQRQE 106 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHT--------TCTTCEEEEECCCCSSSCTTCSSHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHC--------CCCcceeEEEeccCCCCCCCCCCHHHHHH
Confidence 4566677889999999753221 2 3344555544432 23200 221 111 011
Q ss_pred --hhHHHHHHHHhcCCCCEEEEEecC-C--HHH-------------HHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 006969 163 --RDIKTAWEAVKYAKRPRIHTFIAT-S--GIH-------------MEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (623)
Q Consensus 163 --~dI~~a~eal~~a~~~~v~i~~~~-S--d~h-------------~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~ 224 (623)
+.++.+++..+..|.+.|. .+. + ... .........+...+.+.++.++|++.|+. +.+-
T Consensus 107 ~~~~~~~~i~~A~~lG~~~v~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE 183 (335)
T 2qw5_A 107 ALEYLKSRVDITAALGGEIMM--GPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEIKKVK-LAIE 183 (335)
T ss_dssp HHHHHHHHHHHHHHTTCSEEE--ECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE-EEEC
T ss_pred HHHHHHHHHHHHHHcCCCEEe--ccccCccccccCCcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHcCCE-EEEe
Confidence 3345666666778999882 221 1 000 00000112345566677888889999974 6664
Q ss_pred ccC----CCCCCHHHHHHHHHHHHHcCCcEEeec-Cccc----ccCHHHHHHHHHHHH--HhCCCCcceeEEEeecCCcc
Q 006969 225 PED----AGRSDRKFLYEILGEVIKVGATTLNIP-DTVG----ITMPTEFGKLIADIK--ANTPGIENVVISTHCQNDLG 293 (623)
Q Consensus 225 ~ed----a~r~d~e~l~~~~~~~~~aGa~~I~l~-DTvG----~~~P~~v~~li~~l~--~~~~~~~~v~i~~H~HND~G 293 (623)
+.. ..-.+++.+.++++. .+...+.++ ||.= ...|.++.+.++.+. .+ ...+|++|..
T Consensus 184 ~~~~~~~~~~~t~~~~~~ll~~---v~~~~vgl~~D~~H~~~~g~d~~~~~~~l~~~~~~~r-------i~~vHlkD~~- 252 (335)
T 2qw5_A 184 PITHWETPGPNKLSQLIEFLKG---VKSKQVGVVIDSAHEILDGEGPEIFKTQVEYLAQQGR-------LHYVQVSPPD- 252 (335)
T ss_dssp CCCTTTCSSCCSHHHHHHHHTT---CCCTTEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHTC-------EEEEEECCTT-
T ss_pred eCCcccccccCCHHHHHHHHHh---cCCCCeeEEEecccchhccCChHHHHHHHHHhCCcCC-------EEEEEECCCC-
Confidence 321 122366666666543 354334333 6632 224554445555554 32 3689998842
Q ss_pred hHHHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhccc
Q 006969 294 LSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (623)
Q Consensus 294 lAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~ 338 (623)
-.-+|+ |..+.+.++..|+. +.
T Consensus 253 --------------------~~~~G~--G~id~~~i~~~L~~-gy 274 (335)
T 2qw5_A 253 --------------------RGALHT--SWLPWKSFLTPIVK-VY 274 (335)
T ss_dssp --------------------SSCSSS--SCCCHHHHHHHHHH-HC
T ss_pred --------------------CCCCCC--CCcCHHHHHHHHHc-cC
Confidence 123444 88999999999987 63
No 43
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=95.10 E-value=1.3 Score=43.75 Aligned_cols=235 Identities=11% Similarity=0.068 Sum_probs=116.6
Q ss_pred HHHHHHhHcCCCEEEEe--cCC------CChhHHHHHHHHHHHhccccccCCCccceEEeecccch-------hhHHHHH
Q 006969 105 DIARQLAKLGVDIIEAG--FPA------ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNE-------RDIKTAW 169 (623)
Q Consensus 105 ~Ia~~L~~~Gvd~IEvG--fP~------~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~-------~dI~~a~ 169 (623)
+.++.+.++|++.||+. .|. .++.+.+.++.+.+..+-.+.......+-..-++...+ +.++.++
T Consensus 16 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~i 95 (285)
T 1qtw_A 16 NAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEM 95 (285)
T ss_dssp HHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHHHHHHHHHHHH
Confidence 44566678899999992 121 22345666666655432221000000000001111111 2344556
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHH--HHcCCCeEEEcccCCC----CCCHHHHHHHHHHH
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFA--RSLGCDDVEFSPEDAG----RSDRKFLYEILGEV 243 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a--k~~G~~~V~f~~eda~----r~d~e~l~~~~~~~ 243 (623)
+.....|.+.|.+...... -..+.++.++.+.+.++.+ ++.|+. +.+-+.... -.+++.+.++++.+
T Consensus 96 ~~A~~lGa~~v~~~~g~~~------~~~~~~~~~~~~~~~l~~l~a~~~gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~v 168 (285)
T 1qtw_A 96 QRCEQLGLSLLNFHPGSHL------MQISEEDCLARIAESINIALDKTQGVT-AVIENTAGQGSNLGFKFEHLAAIIDGV 168 (285)
T ss_dssp HHHHHTTCCEEEECCCBCT------TTSCHHHHHHHHHHHHHHHHHHCSSCE-EEEECCCCCTTBCCSSHHHHHHHHHHC
T ss_pred HHHHHcCCCEEEECcCCCC------CCCCHHHHHHHHHHHHHHHHhccCCCE-EEEecCCCCCCcccCCHHHHHHHHHhh
Confidence 6666678888866433221 1125666666666665543 345653 444222111 24778787777765
Q ss_pred HHcCCcEEee-cCc-----ccc--cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccC
Q 006969 244 IKVGATTLNI-PDT-----VGI--TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 315 (623)
Q Consensus 244 ~~aGa~~I~l-~DT-----vG~--~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~ 315 (623)
. +...+.+ -|| .|. ..|..+.+.++.+.+.++. +-...+|.||..+- .|...-.- .
T Consensus 169 ~--~~~~~g~~~D~~H~~~~g~~~~~~~~~~~~~~~~~~~~g~--~~i~~vH~~D~~~~----------~~~~~~~h--~ 232 (285)
T 1qtw_A 169 E--DKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGF--KYLRGMHLNDAKST----------FGSRVDRH--H 232 (285)
T ss_dssp S--CGGGEEEEEEHHHHHHHTCCCSSHHHHHHHHHHHHHHTCG--GGEEEEEECEESSC----------TTCCCCCE--E
T ss_pred c--CccceEEEEEhHhHHHcCCCcCChHHHHHHHHHHHHhcCc--cceeEEEEecCCCc----------ccCCcccc--c
Confidence 1 2222322 265 232 2455677788887766531 13468899976541 01110000 1
Q ss_pred CccCccCcccHHHHHHHHHhcccccc-cccccCCChhHHHHHHHHHHHHhC
Q 006969 316 GIGERAGNASLEEVVMAFKCRGEHIL-GGLYTGINTRHIVMASKMVEEYTG 365 (623)
Q Consensus 316 GlGERaGNa~lEevv~~L~~~~~~~~-~G~~t~idl~~L~~~s~~v~~~~g 365 (623)
.+| .|..+.+.++..|+..+.+-. ..++. .+.+.+.+--+++.++.+
T Consensus 233 ~~G--~G~id~~~~~~~L~~~gy~g~~~~lE~-~~~~~~~~s~~~lr~~~~ 280 (285)
T 1qtw_A 233 SLG--EGNIGHDAFRWIMQDDRFDGIPLILET-INPDIWAEEIAWLKAQQT 280 (285)
T ss_dssp CTT--TSSSCSHHHHHHHTCGGGTTSEEEECC-SCGGGHHHHHHHHHHHTT
T ss_pred CCC--CCCCCHHHHHHHHhccCcCCCCEEEec-CCCcchHHHHHHHHHHHh
Confidence 234 388999999999987653110 11222 244556665566666543
No 44
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=95.10 E-value=1.5 Score=44.82 Aligned_cols=199 Identities=12% Similarity=0.066 Sum_probs=118.0
Q ss_pred eEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEee--
Q 006969 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL-- 157 (623)
Q Consensus 80 v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~-- 157 (623)
...+|-|| .+-..+.++..++.+...+.|+.-+-+ +|. +++...+.+... . ..+..+.+|
T Consensus 59 a~~IDhTl------L~p~~T~~dI~~lc~eA~~~g~aaVCV-~P~-------~V~~a~~~L~~s---~-V~V~tVigFP~ 120 (288)
T 3oa3_A 59 AQIIDHTQ------LSLSATGSQIDVLCAEAKEYGFATVCV-RPD-------YVSRAVQYLQGT---Q-VGVTCVIGFHE 120 (288)
T ss_dssp GGGEEEEC------CCTTCCHHHHHHHHHHHHHHTCSEEEE-CGG-------GHHHHHHHTTTS---S-CEEEEEESTTT
T ss_pred HHhcCccc------CCCCCCHHHHHHHHHHHHhcCCcEEEE-CHH-------HHHHHHHHcCCC---C-CeEEEEeCCCC
Confidence 45678777 234578999999999999999999988 454 344444444221 0 112334444
Q ss_pred cccchh-hHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHH
Q 006969 158 SRCNER-DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFL 236 (623)
Q Consensus 158 ~r~~~~-dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l 236 (623)
+....+ -+..+-+++. .|++.|.+++.... ...-..+++.+.+...++.+.+..+ .|.+ |-. ..+.+.+
T Consensus 121 G~~~~~~Kv~Ea~~Ai~-~GAdEIDmVINig~-----lk~g~~~~v~~eI~~V~~a~~~~~l-KVIl--Et~-~Lt~eei 190 (288)
T 3oa3_A 121 GTYSTDQKVSEAKRAMQ-NGASELDMVMNYPW-----LSEKRYTDVFQDIRAVRLAAKDAIL-KVIL--ETS-QLTADEI 190 (288)
T ss_dssp SCSCHHHHHHHHHHHHH-TTCSEEEEECCHHH-----HHTTCHHHHHHHHHHHHHHTTTSEE-EEEC--CGG-GCCHHHH
T ss_pred CCCcHHHHHHHHHHHHH-cCCCEEEEEeehhh-----hcCCcHHHHHHHHHHHHHHhcCCCc-eEEE--ECC-CCCHHHH
Confidence 111111 1112223332 49999998876432 2234567778888777777654323 2444 322 3456778
Q ss_pred HHHHHHHHHcCCcEEeecC--cccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 237 YEILGEVIKVGATTLNIPD--TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~D--TvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
...++.+.++|||-|--.- +.|.++++.+. +++.+.+...+.-.+..+=-.++ ...+++-+++||++|=+
T Consensus 191 ~~A~~ia~eaGADfVKTSTGf~~~GAT~edv~-lmr~~v~~~g~~v~VKAAGGIrt-----~edAl~mi~aGA~RiGt 262 (288)
T 3oa3_A 191 IAGCVLSSLAGADYVKTSTGFNGPGASIENVS-LMSAVCDSLQSETRVKASGGIRT-----IEDCVKMVRAGAERLGA 262 (288)
T ss_dssp HHHHHHHHHTTCSEEECCCSSSSCCCCHHHHH-HHHHHHHHSSSCCEEEEESSCCS-----HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEcCCCCCCCCCCHHHHH-HHHHHHHHhCCCceEEEeCCCCC-----HHHHHHHHHcCCceeeh
Confidence 8999999999999988762 13467888765 44554443322001222211232 27888999999998733
No 45
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=95.03 E-value=1.7 Score=43.09 Aligned_cols=208 Identities=14% Similarity=0.045 Sum_probs=112.4
Q ss_pred CceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCcc-ceEEe
Q 006969 78 NYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYV-PVICG 156 (623)
Q Consensus 78 ~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~-~~i~~ 156 (623)
.++-+...++++ ++.++ .++.+.++|++.||+..+. .+.+.+.++.+.+.. ++. ..++.
T Consensus 26 mklg~~~~~~~~--------~~~~~---~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~l~~~--------gl~v~~~~~ 85 (287)
T 3kws_A 26 LKLSFQEGIAPG--------ESLNE---KLDFMEKLGVVGFEPGGGG-LAGRVNEIKQALNGR--------NIKVSAICA 85 (287)
T ss_dssp CEEEEETTSSCC--------SSHHH---HHHHHHHTTCCEEECBSTT-CGGGHHHHHHHHTTS--------SCEECEEEC
T ss_pred eeEEEEecccCC--------CCHHH---HHHHHHHcCCCEEEecCCc-hHHHHHHHHHHHHHc--------CCeEEEEec
Confidence 457777888876 35555 4555677899999997652 245555565555432 331 12222
Q ss_pred ec-----ccch-------hhHHHHHHHHhcCCCCEEEEEecCCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE
Q 006969 157 LS-----RCNE-------RDIKTAWEAVKYAKRPRIHTFIATSGIH-MEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF 223 (623)
Q Consensus 157 ~~-----r~~~-------~dI~~a~eal~~a~~~~v~i~~~~Sd~h-~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f 223 (623)
.. ...+ +.++++++.....|.+.|.+........ .........+...+.+.++.++|++.|+. +.+
T Consensus 86 ~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~l 164 (287)
T 3kws_A 86 GFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTS-VIF 164 (287)
T ss_dssp CCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCC-EEE
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EEE
Confidence 11 1111 2345566666667888887643211000 00000012355666777788889999985 655
Q ss_pred cccC----CCCCCHHHHHHHHHHHHHcCCcEEee-cCcccccC-HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHH
Q 006969 224 SPED----AGRSDRKFLYEILGEVIKVGATTLNI-PDTVGITM-PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTA 297 (623)
Q Consensus 224 ~~ed----a~r~d~e~l~~~~~~~~~aGa~~I~l-~DTvG~~~-P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvA 297 (623)
-+.. ..-.+++.+.++++.+ +...+.+ -||.=... -....+.++.+..+ ...+|++|..+.
T Consensus 165 E~~~~~~~~~~~~~~~~~~ll~~v---~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~-------i~~vHlkD~~~r--- 231 (287)
T 3kws_A 165 EPLNRKECFYLRQVADAASLCRDI---NNPGVRCMGDFWHMTWEETSDMGAFISGGEY-------LQHVHVASRKRR--- 231 (287)
T ss_dssp CCCCTTTCSSCCCHHHHHHHHHHH---CCTTEEEEEEHHHHHHHCSCHHHHHHHHGGG-------EEEEEECCTTTS---
T ss_pred EecCcccCcccCCHHHHHHHHHHc---CCCCeeEEeehHHHHhcCCCHHHHHHHhhhh-------EEEEEeCCCCCC---
Confidence 4322 1124677777777654 4333333 35532211 01122333333322 468899987411
Q ss_pred HHHHHHHhCCCEEEeccCCccCccCc--ccHHHHHHHHHhccc
Q 006969 298 NTIAGACAGARQVEVTINGIGERAGN--ASLEEVVMAFKCRGE 338 (623)
Q Consensus 298 NslaAv~aGA~~Vd~Tv~GlGERaGN--a~lEevv~~L~~~~~ 338 (623)
.. .| .|+ .+..+++..|+..+.
T Consensus 232 ---------------~~--pG--~G~d~id~~~i~~~L~~~gy 255 (287)
T 3kws_A 232 ---------------SM--PG--EDGDADNYINGFKGLKMIGY 255 (287)
T ss_dssp ---------------CS--TT--TTGGGCCCHHHHHHHHHTTC
T ss_pred ---------------CC--CC--CCCCCcCHHHHHHHHHHcCC
Confidence 12 23 588 999999999998764
No 46
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=95.02 E-value=0.17 Score=50.71 Aligned_cols=193 Identities=19% Similarity=0.160 Sum_probs=103.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEe---cCCCChhHHHHHHHHHHHhccccccCCCccceE-Ee------ecccch-----
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAG---FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVI-CG------LSRCNE----- 162 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvG---fP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i-~~------~~r~~~----- 162 (623)
.+.++. ++.+.++|++.||+. +|..++.+.+.++.+.+.. ++.... .+ ++...+
T Consensus 17 ~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~--------gl~i~~~~~~~~~~~l~~~d~~~r~~ 85 (294)
T 3vni_A 17 ADYKYY---IEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGN--------GITLTVGHGPSAEQNLSSPDPDIRKN 85 (294)
T ss_dssp CCHHHH---HHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHT--------TCEEEEEECCCGGGCTTCSCHHHHHH
T ss_pred cCHHHH---HHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHc--------CCeEEEeecCCCCcCCCCCCHHHHHH
Confidence 355554 555667799999998 4445566666676666543 221111 11 111111
Q ss_pred --hhHHHHHHHHhcCCCCEEEEE-ecCCHHHHHHHhCCCH----HHHHHHHHHHHHHHHHcCCCeEEEcccC----CCCC
Q 006969 163 --RDIKTAWEAVKYAKRPRIHTF-IATSGIHMEHKLRKTK----QQVVEIARSMVKFARSLGCDDVEFSPED----AGRS 231 (623)
Q Consensus 163 --~dI~~a~eal~~a~~~~v~i~-~~~Sd~h~~~~l~~t~----ee~l~~~~~~v~~ak~~G~~~V~f~~ed----a~r~ 231 (623)
+.++++++.....|.+.|.+. .+.++.. ..-+.+. +...+.+.++.++|++.|+. +.+-+.. ..-.
T Consensus 86 ~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~ 162 (294)
T 3vni_A 86 AKAFYTDLLKRLYKLDVHLIGGALYSYWPID--YTKTIDKKGDWERSVESVREVAKVAEACGVD-FCLEVLNRFENYLIN 162 (294)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEESTTSCSSCC--TTSCCCHHHHHHHHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCC
T ss_pred HHHHHHHHHHHHHHhCCCeeeccccCCCCCc--CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EEEEecCcccCcccC
Confidence 234445555555688888642 2211100 0001233 44556667777888899974 5553322 1124
Q ss_pred CHHHHHHHHHHHHHcCCcEEeec-CcccccCH-HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE
Q 006969 232 DRKFLYEILGEVIKVGATTLNIP-DTVGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 309 (623)
Q Consensus 232 d~e~l~~~~~~~~~aGa~~I~l~-DTvG~~~P-~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 309 (623)
+++.+.++++.+ +...+.++ ||.=...- ....+.++.+.. -...+|.+|...
T Consensus 163 ~~~~~~~l~~~v---~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~-------~i~~vHl~D~~r---------------- 216 (294)
T 3vni_A 163 TAQEGVDFVKQV---DHNNVKVMLDTFHMNIEEDSIGGAIRTAGS-------YLGHLHTGECNR---------------- 216 (294)
T ss_dssp SHHHHHHHHHHH---CCTTEEEEEEHHHHHHHCSCHHHHHHHHGG-------GEEEEEECCTTS----------------
T ss_pred CHHHHHHHHHHc---CCCCEEEEEEhhhhHHcCCCHHHHHHHhhh-------hEeEEEeCCCCC----------------
Confidence 677777777765 43333333 55322111 122333333332 246899999521
Q ss_pred EEeccCCccCccCcccHHHHHHHHHhcc
Q 006969 310 VEVTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 310 Vd~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
... | .|+.+..+++..|+..+
T Consensus 217 ---~~p--G--~G~id~~~~~~~L~~~g 237 (294)
T 3vni_A 217 ---KVP--G--RGRIPWVEIGEALADIG 237 (294)
T ss_dssp ---CCT--T--SSSCCHHHHHHHHHHTT
T ss_pred ---CCC--C--CCCcCHHHHHHHHHHhC
Confidence 122 3 58999999999999765
No 47
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=94.92 E-value=1.2 Score=46.07 Aligned_cols=198 Identities=16% Similarity=0.163 Sum_probs=106.4
Q ss_pred eEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEec----CCCC--------hhHHHHHHHHHHHhccccccC
Q 006969 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS--------KEDFEAVRTIAKEVGNAVDAE 147 (623)
Q Consensus 80 v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGf----P~~s--------~~d~e~v~~i~~~~~~~~~~~ 147 (623)
+=|+-+|..- ..- ..++.+..++.++.+.+.|.|+|.+|. |++. ++|.+.+..+.+.+....
T Consensus 31 MGIlNvTpDS-Fsd--~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~--- 104 (314)
T 3tr9_A 31 MGIINVSPNS-FYH--PHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF--- 104 (314)
T ss_dssp EEEEECSTTC-SBC--BCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEEEeCCCCc-hhh--ccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC---
Confidence 3456665432 211 446899999999999999999999996 5443 223333333333221110
Q ss_pred CCccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccC
Q 006969 148 SGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED 227 (623)
Q Consensus 148 ~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ed 227 (623)
+. | | ..--.+.+-+++|+++ |++.|. .+|- ... .++.+.+++.|+. |......
T Consensus 105 -~v-p-I-SIDT~~~~Va~aAl~a----Ga~iIN---DVsg--------~~~-------~~m~~v~a~~g~~-vVlMh~~ 157 (314)
T 3tr9_A 105 -PQ-L-I-SVDTSRPRVMREAVNT----GADMIN---DQRA--------LQL-------DDALTTVSALKTP-VCLMHFP 157 (314)
T ss_dssp -CS-E-E-EEECSCHHHHHHHHHH----TCCEEE---ETTT--------TCS-------TTHHHHHHHHTCC-EEEECCC
T ss_pred -CC-e-E-EEeCCCHHHHHHHHHc----CCCEEE---ECCC--------CCc-------hHHHHHHHHhCCe-EEEECCC
Confidence 11 1 2 2222356667777776 777654 4442 111 1355666677876 5454433
Q ss_pred CCCCC-------------HHHHHHHHHHHHHcCCc--EEeecCc-cc----ccCHHHHHHHHHHHHHh-CCCCcceeEEE
Q 006969 228 AGRSD-------------RKFLYEILGEVIKVGAT--TLNIPDT-VG----ITMPTEFGKLIADIKAN-TPGIENVVIST 286 (623)
Q Consensus 228 a~r~d-------------~e~l~~~~~~~~~aGa~--~I~l~DT-vG----~~~P~~v~~li~~l~~~-~~~~~~v~i~~ 286 (623)
+...+ .+++.+.++.+.++|++ .|.| |- .| .-++++-.++++.+.+- ..+.+ +-+|+
T Consensus 158 G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~Iil-DPG~G~~~F~Kt~~~n~~lL~~l~~l~~lg~P-vL~G~ 235 (314)
T 3tr9_A 158 SETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIII-DPGFGQGNYGKNVSENFYLLNKLPEFVAMGLP-VLSGW 235 (314)
T ss_dssp CTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCCCSGGGCCCHHHHHHHHHTTHHHHTTSSC-BEECC
T ss_pred CCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHEEE-eCCCCchhhcCCHHHHHHHHHHHHHHhcCCCC-EEEEe
Confidence 22111 46788888889999985 3443 42 34 23456566666665432 11211 23322
Q ss_pred ------------eecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 287 ------------HCQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 287 ------------H~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
-..+-.+--+|-+..|++.||+.|=+
T Consensus 236 SRKsfig~~~~~~~~~R~~~t~a~~~~a~~~Ga~IvRv 273 (314)
T 3tr9_A 236 SRKSMIGDVLNQPPENRLFGSIAADVLAVYHGASIIRT 273 (314)
T ss_dssp TTCHHHHHHHTCCGGGCHHHHHHHHHHHHHTTCSEEEE
T ss_pred chhhhhhhhcCCChHHhHHHHHHHHHHHHHcCCcEEEe
Confidence 11223333445566778889988733
No 48
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=94.90 E-value=0.56 Score=46.07 Aligned_cols=200 Identities=13% Similarity=0.057 Sum_probs=109.0
Q ss_pred ceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecC--------------CCChhHHHHHHHHHHHhcccc
Q 006969 79 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFP--------------AASKEDFEAVRTIAKEVGNAV 144 (623)
Q Consensus 79 ~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP--------------~~s~~d~e~v~~i~~~~~~~~ 144 (623)
++-+.--|+|+ ++.++ .++.+.++|++.||+... ..++.+.+.++.+.+..
T Consensus 11 klg~~~~~~~~--------~~~~~---~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---- 75 (262)
T 3p6l_A 11 RLGMQSYSFHL--------FPLTE---ALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASK---- 75 (262)
T ss_dssp EEEEEGGGGTT--------SCHHH---HHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHT----
T ss_pred EEEEEecccCC--------CCHHH---HHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHc----
Confidence 45566666765 35555 455567789999999631 12345566666665543
Q ss_pred ccCCCcc-ceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE
Q 006969 145 DAESGYV-PVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF 223 (623)
Q Consensus 145 ~~~~~l~-~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f 223 (623)
++. ..+........++++++++.....|.+.|.+... .+.+ .++.++|++.|+. +.+
T Consensus 76 ----gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~--------------~~~~---~~l~~~a~~~gv~-l~~ 133 (262)
T 3p6l_A 76 ----GIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPA--------------LSDW---DLVEKLSKQYNIK-ISV 133 (262)
T ss_dssp ----TCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECCC--------------GGGH---HHHHHHHHHHTCE-EEE
T ss_pred ----CCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecCC--------------HHHH---HHHHHHHHHhCCE-EEE
Confidence 331 2222232234567778887777789998877522 1222 4667888999974 555
Q ss_pred cccCC-CC-CCHHHHHHHHHHHHHcCCcEEeec-CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH
Q 006969 224 SPEDA-GR-SDRKFLYEILGEVIKVGATTLNIP-DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 300 (623)
Q Consensus 224 ~~eda-~r-~d~e~l~~~~~~~~~aGa~~I~l~-DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl 300 (623)
-+... +. .+++.+.++++. +...+.++ ||.=...-. .+....+++ +.+ -...+|++|..--.
T Consensus 134 En~~~~~~~~~~~~~~~ll~~----~~~~~g~~~D~~h~~~~g--~d~~~~l~~-~~~---~i~~vH~~D~~~~~----- 198 (262)
T 3p6l_A 134 HNHPQPSDYWKPENLLKAISG----RSQSLGSCSDVGHWRREG--LNQIDCLKQ-LKG---RIISLHFKDIAPKK----- 198 (262)
T ss_dssp ECCSSSSSSSSHHHHHHHHTT----SCTTEEEEEEHHHHHHTT--CCHHHHHHH-TTT---CEEEEEECEECCCC-----
T ss_pred EeCCCccccCCHHHHHHHHHh----CCCceEEEechHHHHhcC--CCHHHHHHH-Hhh---hheEEeeccCCccc-----
Confidence 33222 11 367777777652 33333333 553221100 012233333 222 24688998865100
Q ss_pred HHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhccc
Q 006969 301 AGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (623)
Q Consensus 301 aAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~ 338 (623)
.|-...+- ..+| .|+.+...++..|+..+.
T Consensus 199 ----~~~~~~~~--~~~G--~G~id~~~~~~~l~~~gy 228 (262)
T 3p6l_A 199 ----AGENEQHD--VIWG--TGILDVKGMLKELKSQNF 228 (262)
T ss_dssp ----TTCSCCCE--ECTT--SSSSCHHHHHHHHHHTTC
T ss_pred ----cCcCcccc--CCCC--CCccCHHHHHHHHHHCCC
Confidence 01111111 1234 489999999999998764
No 49
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=94.77 E-value=0.47 Score=46.48 Aligned_cols=165 Identities=17% Similarity=0.199 Sum_probs=98.1
Q ss_pred HHHHHHHHhHcCCCEEEEe-----c-CCCChhHHHHHHHHHHHhccccccCCCccceEEeecccc-hhhHHHHHHHHhcC
Q 006969 103 KLDIARQLAKLGVDIIEAG-----F-PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-ERDIKTAWEAVKYA 175 (623)
Q Consensus 103 Kl~Ia~~L~~~Gvd~IEvG-----f-P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~-~~dI~~a~eal~~a 175 (623)
-.+.++.+.+.|+|+|++. | |.. ....+.++.|.+.. +. +..+.+--.+ .+.++.+.++
T Consensus 21 l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~-~~~~~~~~~lr~~~-~~--------~~~v~lmv~d~~~~i~~~~~a---- 86 (228)
T 1h1y_A 21 LAAEADRMVRLGADWLHMDIMDGHFVPNL-TIGAPVIQSLRKHT-KA--------YLDCHLMVTNPSDYVEPLAKA---- 86 (228)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEBSSSSSCB-CBCHHHHHHHHTTC-CS--------EEEEEEESSCGGGGHHHHHHH----
T ss_pred HHHHHHHHHHcCCCEEEEEEecCCcCcch-hhCHHHHHHHHhhc-CC--------cEEEEEEecCHHHHHHHHHHc----
Confidence 3456777889999999998 4 432 22346677776532 10 1122222112 2347776665
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHc--CCcEEee
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKV--GATTLNI 253 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~a--Ga~~I~l 253 (623)
|.+.|++..-.++. . +.+.++.+++.|+. +.++... .++.+.+ +...+. ++|.|.+
T Consensus 87 gad~v~vH~~~~~~------------~---~~~~~~~i~~~g~~-igv~~~p--~t~~e~~----~~~~~~~~~~d~vl~ 144 (228)
T 1h1y_A 87 GASGFTFHIEVSRD------------N---WQELIQSIKAKGMR-PGVSLRP--GTPVEEV----FPLVEAENPVELVLV 144 (228)
T ss_dssp TCSEEEEEGGGCTT------------T---HHHHHHHHHHTTCE-EEEEECT--TSCGGGG----HHHHHSSSCCSEEEE
T ss_pred CCCEEEECCCCccc------------H---HHHHHHHHHHcCCC-EEEEEeC--CCCHHHH----HHHHhcCCCCCEEEE
Confidence 89999776544431 0 13566777888875 5554421 2333333 344455 8888877
Q ss_pred ----cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 254 ----PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 254 ----~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
+-+.|...++..-+.++.+++..++ ++|.+ +.|....|.-.++++||+.|
T Consensus 145 ~sv~pg~~g~~~~~~~l~~i~~~~~~~~~---~pi~v----~GGI~~~ni~~~~~aGaD~v 198 (228)
T 1h1y_A 145 MTVEPGFGGQKFMPEMMEKVRALRKKYPS---LDIEV----DGGLGPSTIDVAASAGANCI 198 (228)
T ss_dssp ESSCTTCSSCCCCGGGHHHHHHHHHHCTT---SEEEE----ESSCSTTTHHHHHHHTCCEE
T ss_pred EeecCCCCcccCCHHHHHHHHHHHHhcCC---CCEEE----ECCcCHHHHHHHHHcCCCEE
Confidence 2222444566677778888887742 45543 46777778888899999886
No 50
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=94.72 E-value=0.2 Score=49.95 Aligned_cols=207 Identities=17% Similarity=0.167 Sum_probs=106.3
Q ss_pred ceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCCh---hHHHHHHHHHHHhccccccCCCccceEE
Q 006969 79 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASK---EDFEAVRTIAKEVGNAVDAESGYVPVIC 155 (623)
Q Consensus 79 ~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~---~d~e~v~~i~~~~~~~~~~~~~l~~~i~ 155 (623)
++-+.-.++++.. ..+.++.+ +.+.++|++.||+..+...+ .+.+.++.+.+..+-. +..+.
T Consensus 3 kig~~~~~~~~~~-----~~~~~~~l---~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~-------~~~~~ 67 (290)
T 2qul_A 3 KVGMFYTYWSTEW-----MVDFPATA---KRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLT-------VMCCI 67 (290)
T ss_dssp CEEEETTSSCSSS-----CCCHHHHH---HHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCE-------EEEEE
T ss_pred ceeEEeeeecCcc-----cccHHHHH---HHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCc-------eEEec
Confidence 3445555555421 23555554 45567899999997543222 4455566555543221 11111
Q ss_pred e------ecccch-------hhHHHHHHHHhcCCCCEEEEEe----cCCHHHHHHHhCCC----HHHHHHHHHHHHHHHH
Q 006969 156 G------LSRCNE-------RDIKTAWEAVKYAKRPRIHTFI----ATSGIHMEHKLRKT----KQQVVEIARSMVKFAR 214 (623)
Q Consensus 156 ~------~~r~~~-------~dI~~a~eal~~a~~~~v~i~~----~~Sd~h~~~~l~~t----~ee~l~~~~~~v~~ak 214 (623)
+ ++...+ +.++++++.....|.+.|.++. .....+ -..+ .+...+.+.++.++|+
T Consensus 68 ~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~l~~l~~~a~ 143 (290)
T 2qul_A 68 GLKSEYDFASPDKSVRDAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPL----DMKDKRPYVDRAIESVRRVIKVAE 143 (290)
T ss_dssp EECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCT----TCCCCHHHHHHHHHHHHTTHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCC----CcccHHHHHHHHHHHHHHHHHHHH
Confidence 1 111111 3345556655666888876532 110000 0112 2445566677778899
Q ss_pred HcCCCeEEEcccC----CCCCCHHHHHHHHHHHHHcCCcEEee-cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeec
Q 006969 215 SLGCDDVEFSPED----AGRSDRKFLYEILGEVIKVGATTLNI-PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQ 289 (623)
Q Consensus 215 ~~G~~~V~f~~ed----a~r~d~e~l~~~~~~~~~aGa~~I~l-~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~H 289 (623)
+.|+. +.+-+.. ..-.+++.+.++++.+ +...+.+ -||.=...-. .+....+++..+ -...+|.|
T Consensus 144 ~~gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~~---~~~~~g~~~D~~h~~~~g--~d~~~~l~~~~~----~i~~vH~~ 213 (290)
T 2qul_A 144 DYGII-YALEVVNRFEQWLCNDAKEAIAFADAV---DSPACKVQLDTFHMNIEE--TSFRDAILACKG----KMGHFHLG 213 (290)
T ss_dssp HHTCE-EEEECCCTTTCSSCCSHHHHHHHHHHH---CCTTEEEEEEHHHHHHHC--SCHHHHHHHTTT----TEEEEEEC
T ss_pred HcCCE-EEEEeCccccccccCCHHHHHHHHHHc---CCCCEEEEEEchhhhhcC--CCHHHHHHHHHh----heeEEEEc
Confidence 99974 5553322 1224677777777654 4332322 3663211100 012233333222 24689999
Q ss_pred CCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcc
Q 006969 290 NDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 290 ND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
|..+ .-+|+ |..+...++..|+..+
T Consensus 214 D~~~---------------------~~~G~--G~id~~~~~~~L~~~g 238 (290)
T 2qul_A 214 EANR---------------------LPPGE--GRLPWDEIFGALKEIG 238 (290)
T ss_dssp CTTS---------------------CCTTS--SCSCHHHHHHHHHHTT
T ss_pred cCCC---------------------CCCCC--CCcCHHHHHHHHHHhC
Confidence 8642 13454 8899999999998765
No 51
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=94.72 E-value=0.25 Score=50.21 Aligned_cols=180 Identities=13% Similarity=0.122 Sum_probs=105.0
Q ss_pred EEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeeccc
Q 006969 81 RVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC 160 (623)
Q Consensus 81 ~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~ 160 (623)
+|+++| .|-.+-.+...+.+.-++.++.+.+.|.|+|.+|.-.+.+++.+.+..+.+.+.... . +| |+.=+ .
T Consensus 15 EilN~T-pdsf~dg~~~~~~~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~----~-~p-isIDT-~ 86 (271)
T 2yci_X 15 ERINGM-FKDIREAILNKDPRPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVV----D-LP-CCLDS-T 86 (271)
T ss_dssp EEEETT-SHHHHHHHHTTCCHHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHC----C-CC-EEEEC-S
T ss_pred EecCCC-hhhHHHhhhhCCHHHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhC----C-Ce-EEEeC-C
Confidence 488898 554333334467799999999999999999999986555566666655554432210 1 12 22222 3
Q ss_pred chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc--CCCCCC----HH
Q 006969 161 NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSD----RK 234 (623)
Q Consensus 161 ~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e--da~r~d----~e 234 (623)
+.+-+++++++.. |.+.|. ++|- .. +.+.++...++++|.. |...+. .+...+ .+
T Consensus 87 ~~~v~~aal~a~~--Ga~iIN---dvs~---------~~----d~~~~~~~~~a~~~~~-vv~m~~d~~G~p~t~~~~~~ 147 (271)
T 2yci_X 87 NPDAIEAGLKVHR--GHAMIN---STSA---------DQ----WKMDIFFPMAKKYEAA-IIGLTMNEKGVPKDANDRSQ 147 (271)
T ss_dssp CHHHHHHHHHHCC--SCCEEE---EECS---------CH----HHHHHHHHHHHHHTCE-EEEESCBTTBCCCSHHHHHH
T ss_pred CHHHHHHHHHhCC--CCCEEE---ECCC---------Cc----cccHHHHHHHHHcCCC-EEEEecCCCCCCCCHHHHHH
Confidence 5666777777632 666654 3331 11 2234566777888885 555443 233444 67
Q ss_pred HHHHHHHHHHHcCCcE--EeecCcccc--cCHHHHHHHHHHHH---HhC-CCCcceeEEEeecC
Q 006969 235 FLYEILGEVIKVGATT--LNIPDTVGI--TMPTEFGKLIADIK---ANT-PGIENVVISTHCQN 290 (623)
Q Consensus 235 ~l~~~~~~~~~aGa~~--I~l~DTvG~--~~P~~v~~li~~l~---~~~-~~~~~v~i~~H~HN 290 (623)
++.+.++.+.++|... |.|==.+|. .+.++-.++++.++ +.. |+ .|+.+=.+|
T Consensus 148 ~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~~~~~~~l~~l~~~~~~~~p~---~p~l~G~Sn 208 (271)
T 2yci_X 148 LAMELVANADAHGIPMTELYIDPLILPVNVAQEHAVEVLETIRQIKLMANPA---PRTVLGLSN 208 (271)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEECCCCCTTTSTHHHHHHHHHHHHHTTSSSSC---CEEEEEGGG
T ss_pred HHHHHHHHHHHCCCCcccEEEecCCCccccCHHHHHHHHHHHHHHHHhCCCC---CCEEEeeCc
Confidence 8888888899999863 544222222 13444445555544 444 33 455554555
No 52
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=94.62 E-value=0.97 Score=44.30 Aligned_cols=214 Identities=14% Similarity=0.119 Sum_probs=112.8
Q ss_pred ceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEe--
Q 006969 79 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-- 156 (623)
Q Consensus 79 ~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~-- 156 (623)
++-+.-.|+|. .++.++.+ +.+.++|++.||+..+...+.+.+.++.+.+..+-.+ ..+..
T Consensus 6 ~lg~~~~~~~~-------~~~~~~~l---~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~-------~~~~~~~ 68 (275)
T 3qc0_A 6 GLSINLATIRE-------QCGFAEAV---DICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKL-------TGLCRGG 68 (275)
T ss_dssp TEEEEGGGGTT-------TCCHHHHH---HHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEE-------SCEEEEE
T ss_pred cceeeeeeccC-------CCCHHHHH---HHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCce-------EEeecCC
Confidence 35555556643 24666654 5556789999999653212334555555555432221 11221
Q ss_pred -ecccch-------hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCC----HHHHHHHHHHHHHHHHHcCCCeEEEc
Q 006969 157 -LSRCNE-------RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKT----KQQVVEIARSMVKFARSLGCDDVEFS 224 (623)
Q Consensus 157 -~~r~~~-------~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t----~ee~l~~~~~~v~~ak~~G~~~V~f~ 224 (623)
+....+ +.++++++.....|.+.|.+.....+. -..+ .+...+.+.++.++|++.|+. +.+-
T Consensus 69 ~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~-----~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~lE 142 (275)
T 3qc0_A 69 FFPAPDASGREKAIDDNRRAVDEAAELGADCLVLVAGGLPG-----GSKNIDAARRMVVEGIAAVLPHARAAGVP-LAIE 142 (275)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEEEECBCCCT-----TCCCHHHHHHHHHHHHHHHHHHHHHHTCC-EEEC
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCC-----CCcCHHHHHHHHHHHHHHHHHHHHHcCCE-EEEe
Confidence 221111 345566666667788888776432110 0122 244556677778889999986 6554
Q ss_pred ccC-------CCCCCHHHHHHHHHHHHHcCCcEEee-cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH
Q 006969 225 PED-------AGRSDRKFLYEILGEVIKVGATTLNI-PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST 296 (623)
Q Consensus 225 ~ed-------a~r~d~e~l~~~~~~~~~aGa~~I~l-~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv 296 (623)
+.. ..-.+++.+.++++.+ +. .+.+ -||.=...-....+.++.+... + -...+|.+|...-
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~l~~~~---~~-~vg~~~D~~h~~~~~d~~~~l~~~~~~--~---~i~~vH~~D~~~~-- 211 (275)
T 3qc0_A 143 PLHPMYAADRACVNTLGQALDICETL---GP-GVGVAIDVYHVWWDPDLANQIARAGKM--K---AILAHHICDWLVP-- 211 (275)
T ss_dssp CCCGGGTTTTBSCCCHHHHHHHHHHH---CT-TEEEEEEHHHHTTCTTHHHHHHHHHHT--T---CEEEEEECBCCSS--
T ss_pred ECCCcccCCccccCCHHHHHHHHHHh---Cc-ccEEEEEhhhheeCCCHHHHHHHcCcc--c---eEEEEEecCCCCC--
Confidence 321 1234678788877765 32 2333 3554333212233344444310 1 2468899984211
Q ss_pred HHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhccc
Q 006969 297 ANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (623)
Q Consensus 297 ANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~ 338 (623)
.+ +.+.. -.-+| .|+.+..+++..|+..+.
T Consensus 212 --------~~-~~~~~-r~~~G--~G~id~~~~~~~L~~~gy 241 (275)
T 3qc0_A 212 --------TK-DMLTD-RGMMG--DGVIDLKGIRRRIEAAGF 241 (275)
T ss_dssp --------CC-CSSSB-CBCTT--SSCCCHHHHHHHHHHTTC
T ss_pred --------cc-cccCC-CcCCC--CCccCHHHHHHHHHHcCC
Confidence 00 00000 01234 488999999999998664
No 53
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=94.50 E-value=1.9 Score=42.97 Aligned_cols=196 Identities=13% Similarity=0.086 Sum_probs=119.8
Q ss_pred EEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEee--c
Q 006969 81 RVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL--S 158 (623)
Q Consensus 81 ~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~--~ 158 (623)
..+|-||= +-..+.++..++.+...+.|+.-+-+ +|.. ++...+.+... . ..+..+.+| +
T Consensus 29 ~~IDhTlL------~p~~t~~~i~~lc~eA~~~~~~aVcV-~p~~-------v~~a~~~L~~s---~-v~v~tVigFP~G 90 (239)
T 3ngj_A 29 KYIDHTLL------KADATEEQIRKLCSEAAEYKFASVCV-NPTW-------VPLCAELLKGT---G-VKVCTVIGFPLG 90 (239)
T ss_dssp TTEEEEEC------CTTCCHHHHHHHHHHHHHHTCSEEEE-CGGG-------HHHHHHHHTTS---S-CEEEEEESTTTC
T ss_pred hhcCcccC------CCCCCHHHHHHHHHHHHhcCCcEEEE-CHHH-------HHHHHHHhCCC---C-CeEEEEeccCCC
Confidence 35677762 33578999999999999999999998 6643 33333333221 0 112334444 2
Q ss_pred ccch-hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHH
Q 006969 159 RCNE-RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLY 237 (623)
Q Consensus 159 r~~~-~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~ 237 (623)
.... .-+..+-+++. .|++.|.+.+....+ .....+.+++.+...++.+...-+ .|.+ |.+ ..+.+.+.
T Consensus 91 ~~~~~~Kv~Ea~~Ai~-~GAdEIDmViNig~l-----k~g~~~~v~~eI~~v~~a~~~~~l-KVIl--Et~-~Lt~eei~ 160 (239)
T 3ngj_A 91 ATPSEVKAYETKVAVE-QGAEEVDMVINIGMV-----KAKKYDDVEKDVKAVVDASGKALT-KVII--ECC-YLTNEEKV 160 (239)
T ss_dssp CSCHHHHHHHHHHHHH-TTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHHTTSEE-EEEC--CGG-GSCHHHHH
T ss_pred CCchHHHHHHHHHHHH-cCCCEEEEEeehHHh-----ccccHHHHHHHHHHHHHHhcCCce-EEEE--ecC-CCCHHHHH
Confidence 2111 11222334444 399999998876532 234667788888888887754322 2444 433 35678899
Q ss_pred HHHHHHHHcCCcEEeecC--cccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 006969 238 EILGEVIKVGATTLNIPD--TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (623)
Q Consensus 238 ~~~~~~~~aGa~~I~l~D--TvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 313 (623)
..++.+.++|||-|--.- +.|.++++.+.-+-+.+...++ +..+==.++ ...+++-+++||++|=+|
T Consensus 161 ~a~~ia~~aGADfVKTSTGf~~ggAt~~dv~lmr~~vg~~v~----VKasGGIrt-----~~da~~~i~aGA~riGtS 229 (239)
T 3ngj_A 161 EVCKRCVAAGAEYVKTSTGFGTHGATPEDVKLMKDTVGDKAL----VKAAGGIRT-----FDDAMKMINNGASRIGAS 229 (239)
T ss_dssp HHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHGGGSE----EEEESSCCS-----HHHHHHHHHTTEEEEEES
T ss_pred HHHHHHHHHCcCEEECCCCCCCCCCCHHHHHHHHHhhCCCce----EEEeCCCCC-----HHHHHHHHHhcccceecc
Confidence 999999999999988652 2466788877665554433321 222211121 267888899999987443
No 54
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=94.41 E-value=2.4 Score=40.27 Aligned_cols=158 Identities=18% Similarity=0.150 Sum_probs=94.3
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEee-cccchhhHHHHHHHHhcCC
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL-SRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~-~r~~~~dI~~a~eal~~a~ 176 (623)
.+.++-.++++.+.+.|++.||+.+.. +.-.+.++.+.+..+.. .+.+. +-.+.++++.+.++ |
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~~--~~~~~~i~~ir~~~~~~---------~~ig~~~v~~~~~~~~a~~~----G 83 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFTV--PDADTVIKELSFLKEKG---------AIIGAGTVTSVEQCRKAVES----G 83 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETTS--TTHHHHHHHTHHHHHTT---------CEEEEESCCSHHHHHHHHHH----T
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC--hhHHHHHHHHHHHCCCC---------cEEEecccCCHHHHHHHHHc----C
Confidence 578889999999999999999997643 23234566666543211 12222 11245566666554 8
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCc
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDT 256 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DT 256 (623)
.+.| +.+..+ .+.++++++.|+. +.... .++.. +..+.++|++.|.+-..
T Consensus 84 ad~i--v~~~~~------------------~~~~~~~~~~g~~-vi~g~-----~t~~e----~~~a~~~Gad~vk~~~~ 133 (205)
T 1wa3_A 84 AEFI--VSPHLD------------------EEISQFCKEKGVF-YMPGV-----MTPTE----LVKAMKLGHTILKLFPG 133 (205)
T ss_dssp CSEE--ECSSCC------------------HHHHHHHHHHTCE-EECEE-----CSHHH----HHHHHHTTCCEEEETTH
T ss_pred CCEE--EcCCCC------------------HHHHHHHHHcCCc-EECCc-----CCHHH----HHHHHHcCCCEEEEcCc
Confidence 8887 344322 1466778888875 43211 23333 44567899998875210
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 257 VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 257 vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
.+. --++++.+++.+|+ +++..=. |....|....+.+||+.|-+
T Consensus 134 ----~~~-g~~~~~~l~~~~~~---~pvia~G----GI~~~~~~~~~~~Ga~~v~v 177 (205)
T 1wa3_A 134 ----EVV-GPQFVKAMKGPFPN---VKFVPTG----GVNLDNVCEWFKAGVLAVGV 177 (205)
T ss_dssp ----HHH-HHHHHHHHHTTCTT---CEEEEBS----SCCTTTHHHHHHHTCSCEEE
T ss_pred ----ccc-CHHHHHHHHHhCCC---CcEEEcC----CCCHHHHHHHHHCCCCEEEE
Confidence 111 12566777776653 5565433 22235888889999998743
No 55
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=94.38 E-value=4.1 Score=40.50 Aligned_cols=209 Identities=14% Similarity=0.131 Sum_probs=110.3
Q ss_pred CCceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCC---------ChhHHHHHHHHHHHhccccccC
Q 006969 77 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAA---------SKEDFEAVRTIAKEVGNAVDAE 147 (623)
Q Consensus 77 ~~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~---------s~~d~e~v~~i~~~~~~~~~~~ 147 (623)
|.++-|.--|+|+. ++.++.++. +.++|++.||+.++.. ++++.+.++.+.+..
T Consensus 16 ~~~~gi~~~~~~~~-------~~~~~~l~~---~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------- 78 (295)
T 3cqj_A 16 QIPLGIYEKALPAG-------ECWLERLQL---AKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVET------- 78 (295)
T ss_dssp CCCEEEEGGGSCCC-------SCHHHHHHH---HHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHH-------
T ss_pred cccceeeeecCCCC-------CCHHHHHHH---HHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHc-------
Confidence 34577887788742 567766555 5677999999976432 234455565555543
Q ss_pred CCccc-eEEe-------ecccch-------hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCC----HHHHHHHHHH
Q 006969 148 SGYVP-VICG-------LSRCNE-------RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKT----KQQVVEIARS 208 (623)
Q Consensus 148 ~~l~~-~i~~-------~~r~~~-------~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t----~ee~l~~~~~ 208 (623)
++.. .+.. ++...+ +.++++++.....|.+.|.+.. .... .+.+ .+...+.+.+
T Consensus 79 -gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~-~~~~-----~~~~~~~~~~~~~~~l~~ 151 (295)
T 3cqj_A 79 -GVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAG-YDVY-----YQEANNETRRRFRDGLKE 151 (295)
T ss_dssp -CCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECC-CSCS-----SSCCCHHHHHHHHHHHHH
T ss_pred -CCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECC-CCCC-----cCcCHHHHHHHHHHHHHH
Confidence 2211 1211 111111 2345555555566888876542 1100 0112 2445566677
Q ss_pred HHHHHHHcCCCeEEEcccCC-CCCCHHHHHHHHHHHHHcCCcEEeec-CcccccCH-HHHHHHHHHHHHhCCCCcceeEE
Q 006969 209 MVKFARSLGCDDVEFSPEDA-GRSDRKFLYEILGEVIKVGATTLNIP-DTVGITMP-TEFGKLIADIKANTPGIENVVIS 285 (623)
Q Consensus 209 ~v~~ak~~G~~~V~f~~eda-~r~d~e~l~~~~~~~~~aGa~~I~l~-DTvG~~~P-~~v~~li~~l~~~~~~~~~v~i~ 285 (623)
+.++|++.|+. +.+-+... .-.+++.+.++++.+ +...+.++ ||.=...- ....+.++.+..+ ...
T Consensus 152 l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~l~~~v---~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~-------i~~ 220 (295)
T 3cqj_A 152 SVEMASRAQVT-LAMEIMDYPLMNSISKALGYAHYL---NNPWFQLYPDIGNLSAWDNDVQMELQAGIGH-------IVA 220 (295)
T ss_dssp HHHHHHHHTCE-EEEECCSSGGGCSHHHHHHHHHHH---CCTTEEEECBHHHHHSSSCCHHHHHHHTGGG-------BCC
T ss_pred HHHHHHHhCCE-EEEeeCCCcccCCHHHHHHHHHhc---CCCCeEEEeccchHhhcCCCHHHHHHHhccc-------eEE
Confidence 77888889874 55533221 124667777777655 43334433 65211100 1122233332222 347
Q ss_pred EeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhccc
Q 006969 286 THCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (623)
Q Consensus 286 ~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~ 338 (623)
+|.+|..+ |.. . -..+|+ |..+.++++..|+..+.
T Consensus 221 vHl~D~~~------------g~~--~--~~p~G~--G~id~~~~~~~L~~~gy 255 (295)
T 3cqj_A 221 VHVKDTKP------------GVF--K--NVPFGE--GVVDFERCFETLKQSGY 255 (295)
T ss_dssp EEECEEET------------TEE--E--EECTTS--SSCCHHHHHHHHHHTTC
T ss_pred EEeecCCC------------Ccc--C--CcCCCC--CccCHHHHHHHHHHCCC
Confidence 88887631 211 1 123444 88999999999997653
No 56
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=94.23 E-value=1.5 Score=43.79 Aligned_cols=172 Identities=14% Similarity=0.066 Sum_probs=100.9
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccc-----------hhhHHH
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-----------ERDIKT 167 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~-----------~~dI~~ 167 (623)
+.++-..+++.+.+.|++.|.+ .| ..++.+.+... +-++.+..+.-.. ...++.
T Consensus 43 ~~~~~~~~~~~~~~~g~~~i~~-~~-------~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~ 107 (273)
T 2qjg_A 43 GLIDIRKTVNDVAEGGANAVLL-HK-------GIVRHGHRGYG-------KDVGLIIHLSGGTAISPNPLKKVIVTTVEE 107 (273)
T ss_dssp TSSSHHHHHHHHHHHTCSEEEE-CH-------HHHHSCCCSSS-------CCCEEEEECEECCTTSSSTTCCEECSCHHH
T ss_pred chhhHHHHHHHHHhcCCCEEEe-CH-------HHHHHHHHhhc-------CCCCEEEEEcCCCcCCCCcccchHHHHHHH
Confidence 3344568899999999999986 22 12222111110 1123333332211 344555
Q ss_pred HHHHHhcCCCCEE--EEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE--cccCCCC----CCHHHHHHH
Q 006969 168 AWEAVKYAKRPRI--HTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF--SPEDAGR----SDRKFLYEI 239 (623)
Q Consensus 168 a~eal~~a~~~~v--~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f--~~eda~r----~d~e~l~~~ 239 (623)
+++ +|++.| .+..... +.+++++.+.+.++.+++.|.. +.. .+ ++.. .+++.+.+.
T Consensus 108 a~~----~Ga~~v~~~l~~~~~----------~~~~~~~~~~~v~~~~~~~g~~-viv~~~~-~G~~l~~~~~~~~~~~~ 171 (273)
T 2qjg_A 108 AIR----MGADAVSIHVNVGSD----------EDWEAYRDLGMIAETCEYWGMP-LIAMMYP-RGKHIQNERDPELVAHA 171 (273)
T ss_dssp HHH----TTCSEEEEEEEETST----------THHHHHHHHHHHHHHHHHHTCC-EEEEEEE-CSTTCSCTTCHHHHHHH
T ss_pred HHH----cCCCEEEEEEecCCC----------CHHHHHHHHHHHHHHHHHcCCC-EEEEeCC-CCcccCCCCCHhHHHHH
Confidence 555 489988 5555432 5567888999999999999986 332 22 2211 456666677
Q ss_pred HHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCC---cchHHHHHHHHHHhCCCEEEe
Q 006969 240 LGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQND---LGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 240 ~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND---~GlAvANslaAv~aGA~~Vd~ 312 (623)
++.+.++|+|.|.+.-+ ..+ ++++.+++.++ +|+-.|.=-+ .--++.-...++++||+.|-+
T Consensus 172 a~~a~~~Gad~i~~~~~---~~~----~~l~~i~~~~~----ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 172 ARLGAELGADIVKTSYT---GDI----DSFRDVVKGCP----APVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp HHHHHHTTCSEEEECCC---SSH----HHHHHHHHHCS----SCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHcCCCEEEECCC---CCH----HHHHHHHHhCC----CCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 78899999998887642 223 34555555553 4566665222 222333366677899987643
No 57
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=94.10 E-value=0.36 Score=47.06 Aligned_cols=214 Identities=19% Similarity=0.189 Sum_probs=111.8
Q ss_pred EEeCCCccc--CCCCCCCCCH----HHHHHHHHHHhHcCCCEEEEecCCC----ChhHHHHHHHHHHHhccccccCCCcc
Q 006969 82 VFDTTLRDG--EQSPGATLTS----KEKLDIARQLAKLGVDIIEAGFPAA----SKEDFEAVRTIAKEVGNAVDAESGYV 151 (623)
Q Consensus 82 I~DtTLRDG--~Q~~g~~~t~----e~Kl~Ia~~L~~~Gvd~IEvGfP~~----s~~d~e~v~~i~~~~~~~~~~~~~l~ 151 (623)
|.-..+||| .-..|+.+.. ++-+++++.|.+.|+|.|++--+.. .+..++.++.+.+... .
T Consensus 8 ip~id~~~g~~~~v~g~~~~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~---------i 78 (253)
T 1h5y_A 8 IPCLDIDGGAKVVVKGVNFQGIREVGDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVS---------I 78 (253)
T ss_dssp EEEEEECGGGCEECTTCCCHHHHEEECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCS---------S
T ss_pred EEEEEEcCCceEEEEcccccceeecccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcC---------C
Confidence 445556888 4334554432 3567899999999999999853322 1234677777776531 2
Q ss_pred ceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeE--EEccc---
Q 006969 152 PVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDV--EFSPE--- 226 (623)
Q Consensus 152 ~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V--~f~~e--- 226 (623)
|.+....-...++++.++++ |++.|++-... +.......+.++.+|.+.+ ..++-
T Consensus 79 pvi~~g~i~~~~~~~~~~~~----Gad~V~i~~~~----------------~~~~~~~~~~~~~~g~~~i~~~~~~~~~~ 138 (253)
T 1h5y_A 79 PVLVGGGVRSLEDATTLFRA----GADKVSVNTAA----------------VRNPQLVALLAREFGSQSTVVAIDAKWNG 138 (253)
T ss_dssp CEEEESSCCSHHHHHHHHHH----TCSEEEESHHH----------------HHCTHHHHHHHHHHCGGGEEEEEEEEECS
T ss_pred CEEEECCCCCHHHHHHHHHc----CCCEEEEChHH----------------hhCcHHHHHHHHHcCCCcEEEEEEeecCC
Confidence 44443333345666666654 88888764210 1111112233344453212 11110
Q ss_pred -------CCCCC-CHHHHHHHHHHHHHcCCcEEee--cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-
Q 006969 227 -------DAGRS-DRKFLYEILGEVIKVGATTLNI--PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS- 295 (623)
Q Consensus 227 -------da~r~-d~e~l~~~~~~~~~aGa~~I~l--~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA- 295 (623)
..+.. ......+.++.+.+.|++.|.+ .+..|..... -.++++.+++..+ +||-.= -|..
T Consensus 139 g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~-~~~~i~~l~~~~~----~pvia~----GGi~~ 209 (253)
T 1h5y_A 139 EYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLGY-DVELIRRVADSVR----IPVIAS----GGAGR 209 (253)
T ss_dssp SSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSCC-CHHHHHHHHHHCS----SCEEEE----SCCCS
T ss_pred CcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCcC-CHHHHHHHHHhcC----CCEEEe----CCCCC
Confidence 01110 0012345567778889999887 3433332211 1345566666542 334332 4444
Q ss_pred HHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhc
Q 006969 296 TANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCR 336 (623)
Q Consensus 296 vANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~ 336 (623)
..|...++++||+.|-+.=.=+ + +.-+++++...|+..
T Consensus 210 ~~~~~~~~~~Ga~~v~vgsal~--~-~~~~~~~~~~~l~~~ 247 (253)
T 1h5y_A 210 VEHFYEAAAAGADAVLAASLFH--F-RVLSIAQVKRYLKER 247 (253)
T ss_dssp HHHHHHHHHTTCSEEEESHHHH--T-TSSCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCcHHHHHHHHH--c-CCCCHHHHHHHHHHc
Confidence 3778888889999873321001 1 223477777777654
No 58
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=94.10 E-value=1.5 Score=42.06 Aligned_cols=159 Identities=16% Similarity=0.149 Sum_probs=95.8
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeec-ccchhhHHHHHHHHhcCC
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS-RCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~-r~~~~dI~~a~eal~~a~ 176 (623)
.+.++-.++++.+.+.|++.||+..+. +...+.++.+.+..+. +.+.+.+ -.+.++++.++++ |
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~--~~~~~~i~~i~~~~~~---------~l~vg~g~~~~~~~i~~a~~~----G 80 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNS--PQWEQSIPAIVDAYGD---------KALIGAGTVLKPEQVDALARM----G 80 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTS--TTHHHHHHHHHHHHTT---------TSEEEEECCCSHHHHHHHHHT----T
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC--hhHHHHHHHHHHhCCC---------CeEEEeccccCHHHHHHHHHc----C
Confidence 467788999999999999999998763 4445677777664321 1222211 1234566666654 8
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCc
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDT 256 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DT 256 (623)
.+.|++ +..+ .+.++.+++.|.+ +..++ .+++.+ ..+.+.|+|.|.+--|
T Consensus 81 ad~V~~--~~~~------------------~~~~~~~~~~g~~-~~~g~-----~t~~e~----~~a~~~G~d~v~v~~t 130 (212)
T 2v82_A 81 CQLIVT--PNIH------------------SEVIRRAVGYGMT-VCPGC-----ATATEA----FTALEAGAQALKIFPS 130 (212)
T ss_dssp CCEEEC--SSCC------------------HHHHHHHHHTTCE-EECEE-----CSHHHH----HHHHHTTCSEEEETTH
T ss_pred CCEEEe--CCCC------------------HHHHHHHHHcCCC-EEeec-----CCHHHH----HHHHHCCCCEEEEecC
Confidence 898872 2211 1345677888864 43332 345443 3456789999886322
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 257 VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 257 vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
- | .--+.++.+++.++. +++|.. +-|....|....+++||+.|-+
T Consensus 131 ~----~-~g~~~~~~l~~~~~~--~ipvia----~GGI~~~~i~~~~~~Ga~gv~v 175 (212)
T 2v82_A 131 S----A-FGPQYIKALKAVLPS--DIAVFA----VGGVTPENLAQWIDAGCAGAGL 175 (212)
T ss_dssp H----H-HCHHHHHHHHTTSCT--TCEEEE----ESSCCTTTHHHHHHHTCSEEEE
T ss_pred C----C-CCHHHHHHHHHhccC--CCeEEE----eCCCCHHHHHHHHHcCCCEEEE
Confidence 1 1 112556666665541 244543 2444456778888999999863
No 59
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=93.97 E-value=2 Score=42.17 Aligned_cols=185 Identities=12% Similarity=0.051 Sum_probs=111.6
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecc--cch----hhHHHH
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR--CNE----RDIKTA 168 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r--~~~----~dI~~a 168 (623)
+-..+.++..++.+...+.|++-+-+ +|. +++...+.+... . ..+..+.+|-. ... ..++.|
T Consensus 13 ~p~~t~~~i~~l~~~a~~~~~~aVcv-~p~-------~v~~~~~~l~~~---~-v~v~~vigFP~G~~~~~~k~~e~~~A 80 (220)
T 1ub3_A 13 KPTATLEEVAKAAEEALEYGFYGLCI-PPS-------YVAWVRARYPHA---P-FRLVTVVGFPLGYQEKEVKALEAALA 80 (220)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCSEEEC-CGG-------GHHHHHHHCTTC---S-SEEEEEESTTTCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEE-CHH-------HHHHHHHHhCCC---C-ceEEEEecCCCCCCchHHHHHHHHHH
Confidence 34468999999999999999999987 454 233333333221 0 01122223311 111 123333
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCC
Q 006969 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGA 248 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa 248 (623)
++ .|++.|.+.+....+ .....+++++.+...++.+.+.+++ |.+ |.. ..+++.+...++.+.++||
T Consensus 81 i~----~GAdevd~vinig~~-----~~g~~~~v~~ei~~v~~a~~~~~lk-vIl--et~-~l~~e~i~~a~~ia~eaGA 147 (220)
T 1ub3_A 81 CA----RGADEVDMVLHLGRA-----KAGDLDYLEAEVRAVREAVPQAVLK-VIL--ETG-YFSPEEIARLAEAAIRGGA 147 (220)
T ss_dssp HH----TTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHSTTSEEE-EEC--CGG-GSCHHHHHHHHHHHHHHTC
T ss_pred HH----cCCCEEEecccchhh-----hCCCHHHHHHHHHHHHHHHcCCCce-EEE--ecC-CCCHHHHHHHHHHHHHhCC
Confidence 33 499999988765421 1235677888888888877655443 444 322 2457889999999999999
Q ss_pred cEEeecC--cccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 006969 249 TTLNIPD--TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (623)
Q Consensus 249 ~~I~l~D--TvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 313 (623)
|.|--.- +.|.++|+.+..+-+.+...+ .+.++==.+ + ...+++-+++||++|=+|
T Consensus 148 DfVKTsTGf~~~gat~~dv~~m~~~vg~~v----~VkaaGGir-t----~~~al~~i~aGa~RiG~S 205 (220)
T 1ub3_A 148 DFLKTSTGFGPRGASLEDVALLVRVAQGRA----QVKAAGGIR-D----RETALRMLKAGASRLGTS 205 (220)
T ss_dssp SEEECCCSSSSCCCCHHHHHHHHHHHTTSS----EEEEESSCC-S----HHHHHHHHHTTCSEEEET
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhhCCCC----eEEEECCCC-C----HHHHHHHHHCCCcccchh
Confidence 9987652 246678888877665542222 133332123 2 256777778999977443
No 60
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=93.93 E-value=0.88 Score=44.81 Aligned_cols=153 Identities=14% Similarity=0.087 Sum_probs=98.3
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCC
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~ 178 (623)
+.++-+++++.|.+.|++.||+.+- ++...+.++.+++..+.. ..-.+. -...++++.|+++ |.+
T Consensus 36 ~~~~~~~~~~al~~gGv~~iel~~k--~~~~~~~i~~l~~~~~~~--------~igagt-vl~~d~~~~A~~a----GAd 100 (225)
T 1mxs_A 36 REEDILPLADALAAGGIRTLEVTLR--SQHGLKAIQVLREQRPEL--------CVGAGT-VLDRSMFAAVEAA----GAQ 100 (225)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEESS--STHHHHHHHHHHHHCTTS--------EEEEEC-CCSHHHHHHHHHH----TCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecC--CccHHHHHHHHHHhCccc--------EEeeCe-EeeHHHHHHHHHC----CCC
Confidence 5667789999999999999999863 455567888888764321 112222 2355778888876 788
Q ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCccc
Q 006969 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG 258 (623)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG 258 (623)
-||. +..+ .+.++.++.+|.. +..+ -.+++.+ ..+.++|+|.|.+
T Consensus 101 ~v~~--p~~d------------------~~v~~~~~~~g~~-~i~G-----~~t~~e~----~~A~~~Gad~vk~----- 145 (225)
T 1mxs_A 101 FVVT--PGIT------------------EDILEAGVDSEIP-LLPG-----ISTPSEI----MMGYALGYRRFKL----- 145 (225)
T ss_dssp SEEC--SSCC------------------HHHHHHHHHCSSC-EECE-----ECSHHHH----HHHHTTTCCEEEE-----
T ss_pred EEEe--CCCC------------------HHHHHHHHHhCCC-EEEe-----eCCHHHH----HHHHHCCCCEEEE-----
Confidence 8873 2222 2567788888875 2222 2334433 4456889998877
Q ss_pred ccCHHH-H--HHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH-hCCCEE
Q 006969 259 ITMPTE-F--GKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQV 310 (623)
Q Consensus 259 ~~~P~~-v--~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~-aGA~~V 310 (623)
.|.+ + -++++.++..+|+ +|+-. .-|.-..|.-.-+. +|++.|
T Consensus 146 --FPa~~~~G~~~lk~i~~~~~~---ipvva----iGGI~~~N~~~~l~~~Ga~~v 192 (225)
T 1mxs_A 146 --FPAEISGGVAAIKAFGGPFGD---IRFCP----TGGVNPANVRNYMALPNVMCV 192 (225)
T ss_dssp --TTHHHHTHHHHHHHHHTTTTT---CEEEE----BSSCCTTTHHHHHHSTTBCCE
T ss_pred --ccCccccCHHHHHHHHhhCCC---CeEEE----ECCCCHHHHHHHHhccCCEEE
Confidence 4433 3 3678888887764 45532 13444557777788 687765
No 61
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=93.90 E-value=0.19 Score=49.04 Aligned_cols=165 Identities=16% Similarity=0.136 Sum_probs=88.7
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeec-ccch-hhHHHHHHHHhcC
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS-RCNE-RDIKTAWEAVKYA 175 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~-r~~~-~dI~~a~eal~~a 175 (623)
.+.++-+++++.+ +-|+|.+|+|||-.-..-.+.++.+++...+. +.+..+- .-.. .-++.+ ..+
T Consensus 16 ~~~~~~~~~~~~~-~~~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~--------~i~ld~~l~d~p~~~~~~~----~~a 82 (218)
T 3jr2_A 16 TNLTDAVAVASNV-ASYVDVIEVGTILAFAEGMKAVSTLRHNHPNH--------ILVCDMKTTDGGAILSRMA----FEA 82 (218)
T ss_dssp SSHHHHHHHHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHHCTTS--------EEEEEEEECSCHHHHHHHH----HHH
T ss_pred CCHHHHHHHHHHh-cCCceEEEeCcHHHHhcCHHHHHHHHHhCCCC--------cEEEEEeecccHHHHHHHH----Hhc
Confidence 4788999999997 56999999998742222246778877652111 1111111 0011 123333 345
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE---cccCCCCCCHHHHHHHHHHHHHcCCcEEe
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF---SPEDAGRSDRKFLYEILGEVIKVGATTLN 252 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f---~~eda~r~d~e~l~~~~~~~~~aGa~~I~ 252 (623)
|++.|.+..-..+ +.+.+.++.++++|++ +.+ ++ .+++.+.+ +.+.|++.+.
T Consensus 83 Gad~i~vh~~~~~---------------~~~~~~~~~~~~~g~~-~~~d~l~~-----~T~~~~~~----~~~~g~d~v~ 137 (218)
T 3jr2_A 83 GADWITVSAAAHI---------------ATIAACKKVADELNGE-IQIEIYGN-----WTMQDAKA----WVDLGITQAI 137 (218)
T ss_dssp TCSEEEEETTSCH---------------HHHHHHHHHHHHHTCE-EEEECCSS-----CCHHHHHH----HHHTTCCEEE
T ss_pred CCCEEEEecCCCH---------------HHHHHHHHHHHHhCCc-cceeeeec-----CCHHHHHH----HHHcCcccee
Confidence 8998876543321 2344677778888875 432 33 23443333 3456999765
Q ss_pred e-c----Ccccc-cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 253 I-P----DTVGI-TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 253 l-~----DTvG~-~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
+ . .+.|. ..|..+ +.|+.++. + +++|.+= .|--..|+-.++++||+.|
T Consensus 138 ~~~~~~~~~~g~~~~~~~l-~~i~~~~~--~---~~pi~v~----GGI~~~~~~~~~~aGAd~v 191 (218)
T 3jr2_A 138 YHRSRDAELAGIGWTTDDL-DKMRQLSA--L---GIELSIT----GGIVPEDIYLFEGIKTKTF 191 (218)
T ss_dssp EECCHHHHHHTCCSCHHHH-HHHHHHHH--T---TCEEEEE----SSCCGGGGGGGTTSCEEEE
T ss_pred eeeccccccCCCcCCHHHH-HHHHHHhC--C---CCCEEEE----CCCCHHHHHHHHHcCCCEE
Confidence 5 1 11132 234433 33444443 1 2334432 3333455667899998876
No 62
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=93.87 E-value=0.2 Score=50.94 Aligned_cols=169 Identities=18% Similarity=0.201 Sum_probs=87.3
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChh----------------------HHHHHHHHHHHhccccccCCCccceEEe
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKE----------------------DFEAVRTIAKEVGNAVDAESGYVPVICG 156 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~----------------------d~e~v~~i~~~~~~~~~~~~~l~~~i~~ 156 (623)
+.+.-+++++.|.+. +|.||+|.|.+.|- -++.++.+.+... .|.+ .
T Consensus 28 ~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~---------~Pii-~ 96 (271)
T 1ujp_A 28 SREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTE---------KPLF-L 96 (271)
T ss_dssp CHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCC---------SCEE-E
T ss_pred ChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC---------CCEE-E
Confidence 446678899999999 99999999987551 1344555554421 1322 2
Q ss_pred ecccch---hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCH
Q 006969 157 LSRCNE---RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDR 233 (623)
Q Consensus 157 ~~r~~~---~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~ 233 (623)
++-.+. -+++..++.+..+|++.+-+... +. +.+.+.++.++++|++.+.+.. -.++.
T Consensus 97 m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl------------~~----ee~~~~~~~~~~~gl~~i~lia---p~s~~ 157 (271)
T 1ujp_A 97 MTYLNPVLAWGPERFFGLFKQAGATGVILPDL------------PP----DEDPGLVRLAQEIGLETVFLLA---PTSTD 157 (271)
T ss_dssp ECCHHHHHHHCHHHHHHHHHHHTCCEEECTTC------------CG----GGCHHHHHHHHHHTCEEECEEC---TTCCH
T ss_pred EecCcHHHHhhHHHHHHHHHHcCCCEEEecCC------------CH----HHHHHHHHHHHHcCCceEEEeC---CCCCH
Confidence 222221 13344445555568886544221 11 3345677888899975333321 12555
Q ss_pred HHHHHHHHHHHHcCCcEEeec---CcccccCH--HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCC
Q 006969 234 KFLYEILGEVIKVGATTLNIP---DTVGITMP--TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 308 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l~---DTvG~~~P--~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~ 308 (623)
+.+.++++. +..-+++. =++|..++ ....++++.+++.. +. .+.+++-.|+ ......+ +||+
T Consensus 158 eri~~ia~~----~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~-~~-Pv~vGfGI~t------~e~a~~~-~~AD 224 (271)
T 1ujp_A 158 ARIATVVRH----ATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART-AL-PVAVGFGVSG------KATAAQA-AVAD 224 (271)
T ss_dssp HHHHHHHTT----CCSCEEEECC------------CCHHHHHHHHTTC-CS-CEEEESCCCS------HHHHHHH-TTSS
T ss_pred HHHHHHHHh----CCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc-CC-CEEEEcCCCC------HHHHHHh-cCCC
Confidence 555444433 22223222 24454432 33467889998865 22 2555654443 2333335 8887
Q ss_pred EE
Q 006969 309 QV 310 (623)
Q Consensus 309 ~V 310 (623)
.|
T Consensus 225 gV 226 (271)
T 1ujp_A 225 GV 226 (271)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 63
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=93.85 E-value=6.1 Score=40.11 Aligned_cols=194 Identities=13% Similarity=0.123 Sum_probs=116.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+
T Consensus 18 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la- 89 (291)
T 3tak_A 18 GVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVAN-------KRIPIIAGTGANSTREAIELT- 89 (291)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhC-------CCCeEEEeCCCCCHHHHHHHH-
Confidence 478888899999999999999876 3 344455664 45555555543 3357888877644444 4433
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc--CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e--da~r~d~e~l~~~~~~~~~aG 247 (623)
+....+|++.+-+..|-. .+.|.++.++-..+..+. .++..+-|+.- .+...+++.+.+++ + -
T Consensus 90 ~~a~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~ia~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 154 (291)
T 3tak_A 90 KAAKDLGADAALLVTPYY-------NKPTQEGLYQHYKAIAEA---VELPLILYNVPGRTGVDLSNDTAVRLA----E-I 154 (291)
T ss_dssp HHHHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---CCSCEEEEECHHHHSCCCCHHHHHHHT----T-S
T ss_pred HHHHhcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHh---cCCCEEEEecccccCCCCCHHHHHHHH----c-C
Confidence 233456999887765532 245666666655544433 35554555432 24456777665554 3 3
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|- ..++.++++..... ..+ +-.++ ...+.++.+|++.+ +.| .+|...+
T Consensus 155 pnivgiK~ssgd--~~~~~~~~~~~~~~------f~v-~~G~d------~~~~~~l~~G~~G~---is~----~~n~~P~ 212 (291)
T 3tak_A 155 PNIVGIKDATGD--VPRGKALIDALNGK------MAV-YSGDD------ETAWELMLLGADGN---ISV----TANIAPK 212 (291)
T ss_dssp TTEEEEEECSCC--HHHHHHHHHHHTTS------SEE-EECCH------HHHHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEeCCCC--HHHHHHHHHHcCCC------eEE-EECcH------HHHHHHHHCCCCEE---Eec----hhhhcHH
Confidence 579999999874 45666666544322 222 22332 33567888998654 333 4677777
Q ss_pred HHHHHHHh
Q 006969 328 EVVMAFKC 335 (623)
Q Consensus 328 evv~~L~~ 335 (623)
.++...+.
T Consensus 213 ~~~~l~~a 220 (291)
T 3tak_A 213 AMSEVCAV 220 (291)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655443
No 64
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=93.82 E-value=5.5 Score=41.02 Aligned_cols=194 Identities=13% Similarity=0.158 Sum_probs=119.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.||+-|=+ | ++.-+.+|+ +.++...+... +.+|.|.+.+..+.++ |+.+
T Consensus 40 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-------grvpViaGvg~~st~eai~la- 111 (314)
T 3qze_A 40 RLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVK-------GRIPVIAGTGANSTREAVALT- 111 (314)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCcCHHHHHHHH-
Confidence 478889999999999999999877 3 465666665 45555556543 3357888887655444 4443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc--CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e--da~r~d~e~l~~~~~~~~~aG 247 (623)
+....+|++.+-+..|-. ++.+.++.++-..+..+. .++..+-|+.- .+...+++.+.+++ + -
T Consensus 112 ~~A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 176 (314)
T 3qze_A 112 EAAKSGGADACLLVTPYY-------NKPTQEGMYQHFRHIAEA---VAIPQILYNVPGRTSCDMLPETVERLS----K-V 176 (314)
T ss_dssp HHHHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---SCSCEEEEECHHHHSCCCCHHHHHHHH----T-S
T ss_pred HHHHHcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHh---cCCCEEEEeCccccCCCCCHHHHHHHh----c-C
Confidence 334567999887766532 245666666655544443 35554555432 24456777766654 3 3
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|- ..++.++++ ..++ +..+ +-..+++ .+.++.+|++.+ +.| .+|...+
T Consensus 177 pnIvgiKdssgd--~~~~~~~~~----~~~~--~f~v-~~G~d~~------~l~~l~~Ga~G~---is~----~an~~P~ 234 (314)
T 3qze_A 177 PNIIGIKEATGD--LQRAKEVIE----RVGK--DFLV-YSGDDAT------AVELMLLGGKGN---ISV----TANVAPR 234 (314)
T ss_dssp TTEEEEEECSCC--HHHHHHHHH----HSCT--TSEE-EESCGGG------HHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEcCCCC--HHHHHHHHH----HcCC--CeEE-EecChHH------HHHHHHCCCCEE---Eec----HHhhhHH
Confidence 579999999883 445555443 3432 1222 3333332 577889998754 333 4677777
Q ss_pred HHHHHHHh
Q 006969 328 EVVMAFKC 335 (623)
Q Consensus 328 evv~~L~~ 335 (623)
.++...+.
T Consensus 235 ~~~~l~~a 242 (314)
T 3qze_A 235 AMSDLCAA 242 (314)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655543
No 65
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=93.78 E-value=1.6 Score=42.48 Aligned_cols=189 Identities=15% Similarity=0.085 Sum_probs=100.7
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccce-EEe----ec------ccc-----
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPV-ICG----LS------RCN----- 161 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~-i~~----~~------r~~----- 161 (623)
.+.++.+ +.+.++|++.||+.+|. +.+.+.++.+.+.. ++... +.. |. -..
T Consensus 15 ~~~~~~l---~~~~~~G~~~vEl~~~~--~~~~~~~~~~l~~~--------gl~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (260)
T 1k77_A 15 VPFIERF---AAARKAGFDAVEFLFPY--NYSTLQIQKQLEQN--------HLTLALFNTAPGDINAGEWGLSALPGREH 81 (260)
T ss_dssp SCGGGHH---HHHHHHTCSEEECSCCT--TSCHHHHHHHHHHT--------TCEEEEEECCCCCGGGTCSCSTTCTTCHH
T ss_pred CCHHHHH---HHHHHhCCCEEEecCCC--CCCHHHHHHHHHHc--------CCceEEEecCCcccccccCCCCCChhHHH
Confidence 4555555 45566799999998763 23455566555543 22111 211 10 001
Q ss_pred --hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHH----HHHHHHHHHHHHHHHcCCCeEEEcccC------CC
Q 006969 162 --ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQ----QVVEIARSMVKFARSLGCDDVEFSPED------AG 229 (623)
Q Consensus 162 --~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~e----e~l~~~~~~v~~ak~~G~~~V~f~~ed------a~ 229 (623)
.+.++++++.....|.+.|.+.....+ -+.+.+ ...+.+.++.++|++.|+. +.+-+.. ..
T Consensus 82 ~~~~~~~~~i~~a~~lG~~~v~~~~g~~~------~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~~E~~~~~~~~~~~ 154 (260)
T 1k77_A 82 EAHADIDLALEYALALNCEQVHVMAGVVP------AGEDAERYRAVFIDNIRYAADRFAPHGKR-ILVEALSPGVKPHYL 154 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEECCCCBCC------TTSCHHHHHHHHHHHHHHHHHHHGGGTCE-EEECCCCTTTSTTBS
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECcCCCC------CCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EEEEeCCccCCCcCc
Confidence 123556666667779998876433211 012333 3455666777788888874 5553321 12
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEee-cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCC
Q 006969 230 RSDRKFLYEILGEVIKVGATTLNI-PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 308 (623)
Q Consensus 230 r~d~e~l~~~~~~~~~aGa~~I~l-~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~ 308 (623)
-.+++.+.++++.+ +...+.+ -||.=...-. .+....+++..+ -...+|+||..| +
T Consensus 155 ~~~~~~~~~l~~~~---~~~~~g~~~D~~h~~~~~--~d~~~~l~~~~~----~i~~vH~~D~~~--------------r 211 (260)
T 1k77_A 155 FSSQYQALAIVEEV---ARDNVFIQLDTFHAQKVD--GNLTHLIRDYAG----KYAHVQIAGLPD--------------R 211 (260)
T ss_dssp CCSHHHHHHHHHHH---CCTTEEEEEEHHHHHHHT--CCHHHHHHHTTT----SEEEEEECCTTT--------------C
T ss_pred cCCHHHHHHHHHHh---CCCCEEEEeeHHHHHhhC--CCHHHHHHHhhh----heeEEEECCCCC--------------C
Confidence 24667777776654 4333333 2553211100 012233333222 246888888643 1
Q ss_pred EEEeccCCccCccCcccHHHHHHHHHhcc
Q 006969 309 QVEVTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 309 ~Vd~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
.-+| .|..+..+++..|+..+
T Consensus 212 ------~~~G--~G~id~~~~~~~L~~~g 232 (260)
T 1k77_A 212 ------HEPD--DGEINYPWLFRLFDEVG 232 (260)
T ss_dssp ------CCSS--SSSSCHHHHHHHHHHTT
T ss_pred ------CCCC--CCccCHHHHHHHHHHcC
Confidence 1234 58899999999999765
No 66
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=93.73 E-value=1.8 Score=44.47 Aligned_cols=195 Identities=19% Similarity=0.256 Sum_probs=105.2
Q ss_pred eEEEeCCC---cccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEec----CCCC----hhHHHHHHHHHHHhccccccCC
Q 006969 80 VRVFDTTL---RDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDAES 148 (623)
Q Consensus 80 v~I~DtTL---RDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGf----P~~s----~~d~e~v~~i~~~~~~~~~~~~ 148 (623)
+=|+-+|+ =||.+ .++.+.-++.++.+.+.|.|+|.+|. |++. ++|++.+..+.+.+...
T Consensus 26 MgilNvTPDSFsdgg~----~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~----- 96 (294)
T 2y5s_A 26 MGILNATPDSFSDGGR----FLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL----- 96 (294)
T ss_dssp EEEEECCC--------------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG-----
T ss_pred EEEEeCCCCCCCCCCC----cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC-----
Confidence 44666665 45543 46788999999999999999999997 5432 23444444444433211
Q ss_pred CccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc--
Q 006969 149 GYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-- 226 (623)
Q Consensus 149 ~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e-- 226 (623)
+. | |+ .--.+.+-+++|+++ |.+.|. .+|- .. + .++++.++++|+. |...+.
T Consensus 97 ~v-p-iS-IDT~~~~Va~aAl~a----Ga~iIN---dVsg--------~~-d------~~m~~~~a~~~~~-vVlmh~~G 150 (294)
T 2y5s_A 97 NV-P-LS-IDTYKPAVMRAALAA----GADLIN---DIWG--------FR-Q------PGAIDAVRDGNSG-LCAMHMLG 150 (294)
T ss_dssp CS-C-EE-EECCCHHHHHHHHHH----TCSEEE---ETTT--------TC-S------TTHHHHHSSSSCE-EEEECCCE
T ss_pred CC-e-EE-EECCCHHHHHHHHHc----CCCEEE---ECCC--------CC-c------hHHHHHHHHhCCC-EEEECCCC
Confidence 11 1 22 222356667777776 776654 4442 11 1 1456667788875 444332
Q ss_pred ---CC--C--C-CC-----HHHHHHHHHHHHHcCCc--EEeecCc-ccc-cCH-HHHHHHHHHHHHh------CCCCcce
Q 006969 227 ---DA--G--R-SD-----RKFLYEILGEVIKVGAT--TLNIPDT-VGI-TMP-TEFGKLIADIKAN------TPGIENV 282 (623)
Q Consensus 227 ---da--~--r-~d-----~e~l~~~~~~~~~aGa~--~I~l~DT-vG~-~~P-~~v~~li~~l~~~------~~~~~~v 282 (623)
+. . . .| .+++.+.++.+.++|.. .|.| |- +|. -++ ++-.++++.+.+- .++ .
T Consensus 151 ~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~Iil-DPG~Gf~kt~~~~n~~ll~~l~~l~~~~~~~~g---~ 226 (294)
T 2y5s_A 151 EPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICV-DPGFGFGKAVVDDNYALLAALPDTAPARPDGRA---Y 226 (294)
T ss_dssp ETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCTTSSSCTTHHHHHHHHTGGGGSCBCTTSSB---C
T ss_pred CCccccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEE-eCCCcccccchHHHHHHHHHHHHHHhccccCCC---C
Confidence 11 0 1 12 57888888899999986 4443 32 122 234 5555666666542 222 3
Q ss_pred eEEEeecC----------C----c-chHHHHHHHHHHhCCCEEEec
Q 006969 283 VISTHCQN----------D----L-GLSTANTIAGACAGARQVEVT 313 (623)
Q Consensus 283 ~i~~H~HN----------D----~-GlAvANslaAv~aGA~~Vd~T 313 (623)
|+-+=.-| + + +.-.|-+..|++.||+.|.+.
T Consensus 227 Pvl~G~Srksfig~l~g~~~~~~R~~~t~a~~~~a~~~Ga~IvrvH 272 (294)
T 2y5s_A 227 PILAGMSRKSMLGAVIGGKPPLERVAASVAAALCAVERGAAIVRVH 272 (294)
T ss_dssp CBEEECTTCHHHHTTTTSCCGGGCHHHHHHHHHHHHHTTCSEEEES
T ss_pred CEEEEecccHHhhhhcCCCchhhhhHHHHHHHHHHHHcCCcEEEcC
Confidence 33332222 1 1 223445567788898887543
No 67
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=93.73 E-value=2.2 Score=42.80 Aligned_cols=176 Identities=13% Similarity=0.089 Sum_probs=107.0
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeec----c----cchhhHHHHHH
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS----R----CNERDIKTAWE 170 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~----r----~~~~dI~~a~e 170 (623)
+.++-.++.+.+.+.|++.+-+- |. .++... ..+. ++...++..+ + .....++.+++
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~-----~~---~v~~~~--~~~~-----~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~ 103 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ-----RG---IAEKYY--DGSV-----PLILKLNGKTTLYNGEPVSVANCSVEEAVS 103 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC-----HH---HHHHHC--CSSS-----CEEEECEECCTTCCSSCCCEESSCHHHHHH
T ss_pred chhhHHHHHHHHHhhCCCEEEEC-----HH---HHHHhh--cCCC-----cEEEEEeCCCCcCCCCccchHHHHHHHHHH
Confidence 67788899999999999999872 22 222222 1111 2212222211 1 01134555555
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc-cCCCC----CCHHHHHHHHHHHHH
Q 006969 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-EDAGR----SDRKFLYEILGEVIK 245 (623)
Q Consensus 171 al~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~-eda~r----~d~e~l~~~~~~~~~ 245 (623)
. |++.|.+.+-.. ..+.++.++.+.+.++.+++.|+. +...+ -++.. .+++.+.+.++.+.+
T Consensus 104 ~----Ga~~v~~~~nig--------~~~~~~~~~~~~~v~~~~~~~~~~-vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~ 170 (263)
T 1w8s_A 104 L----GASAVGYTIYPG--------SGFEWKMFEELARIKRDAVKFDLP-LVVESFPRGGKVVNETAPEIVAYAARIALE 170 (263)
T ss_dssp T----TCSEEEEEECTT--------STTHHHHHHHHHHHHHHHHHHTCC-EEEEECCCSTTCCCTTCHHHHHHHHHHHHH
T ss_pred C----CCCEEEEEEecC--------CcCHHHHHHHHHHHHHHHHHcCCe-EEEEeeCCCCccccCCCHHHHHHHHHHHHH
Confidence 3 888887765221 134567889999999999999987 43322 12111 167888888899999
Q ss_pred cCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecC--CcchHHHHHHHHHHhCCCEEE
Q 006969 246 VGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQN--DLGLSTANTIAGACAGARQVE 311 (623)
Q Consensus 246 aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HN--D~GlAvANslaAv~aGA~~Vd 311 (623)
+|||.|-.. +.| .|+.+.++. +..+..+ +... =.=+ +.--+++|.-.++++||+.+-
T Consensus 171 ~GAD~vkt~-~~~--~~e~~~~~~----~~~~~~p-V~as-GGi~~~~~~~~l~~i~~~~~aGA~Gvs 229 (263)
T 1w8s_A 171 LGADAMKIK-YTG--DPKTFSWAV----KVAGKVP-VLMS-GGPKTKTEEDFLKQVEGVLEAGALGIA 229 (263)
T ss_dssp HTCSEEEEE-CCS--SHHHHHHHH----HHTTTSC-EEEE-CCSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCCEEEEc-CCC--CHHHHHHHH----HhCCCCe-EEEE-eCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 999998888 432 555555544 4332111 2221 1223 788899999999999998543
No 68
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=93.70 E-value=0.34 Score=49.38 Aligned_cols=206 Identities=12% Similarity=0.005 Sum_probs=103.5
Q ss_pred CceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecC--------CCChh-----HHHHHHHHHHHhcccc
Q 006969 78 NYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFP--------AASKE-----DFEAVRTIAKEVGNAV 144 (623)
Q Consensus 78 ~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP--------~~s~~-----d~e~v~~i~~~~~~~~ 144 (623)
.++=|.=-|+||-... +. .+.++.+.++|++.||+... ...|. +.+.++.+.+..
T Consensus 21 ~~~g~~~~s~~~~~~~-----~l---~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~---- 88 (305)
T 3obe_A 21 KKMGLQTYSLGQELLQ-----DM---PNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDA---- 88 (305)
T ss_dssp CCCEEEGGGGTHHHHT-----TH---HHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHT----
T ss_pred CceEEEEEEchhhhhc-----CH---HHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHC----
Confidence 3455666677763211 33 34566677889999999632 12233 556666665543
Q ss_pred ccCCCccceEEee-------ccc----chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 006969 145 DAESGYVPVICGL-------SRC----NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFA 213 (623)
Q Consensus 145 ~~~~~l~~~i~~~-------~r~----~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a 213 (623)
|+....... ... ..+.++++++..+..|.+.|.+.. ..+...+ ...+...+.+.++.++|
T Consensus 89 ----GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~-~~~~~~~----~~~~~~~~~l~~l~~~a 159 (305)
T 3obe_A 89 ----GLRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPS-LPRIENE----DDAKVVSEIFNRAGEIT 159 (305)
T ss_dssp ----TCEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECC-CCCCSSH----HHHHHHHHHHHHHHHHH
T ss_pred ----CCeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCC-CCCCCCH----HHHHHHHHHHHHHHHHH
Confidence 221111110 010 123455566665666888887632 1110000 01344566777888889
Q ss_pred HHcCCCeEEEcccCCCC--------------------CCHHHHHHHHHHHHHcCCcEEee-cCcccccCHHHHHHHHHHH
Q 006969 214 RSLGCDDVEFSPEDAGR--------------------SDRKFLYEILGEVIKVGATTLNI-PDTVGITMPTEFGKLIADI 272 (623)
Q Consensus 214 k~~G~~~V~f~~eda~r--------------------~d~e~l~~~~~~~~~aGa~~I~l-~DTvG~~~P~~v~~li~~l 272 (623)
+++|+. +.+-+..... ...+.+..+++ +.+.+.+.+ -||.=...-. .+....+
T Consensus 160 ~~~Gv~-l~lEn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~vg~~lD~~H~~~~g--~d~~~~i 233 (305)
T 3obe_A 160 KKAGIL-WGYHNHSNEFKRVLKAGEKPEQNPNPWAPPKGTYIEELFLK---NTDPDKVMFELDVYWAVMGQ--QDPVEWM 233 (305)
T ss_dssp HTTTCE-EEEECCSGGGSEECCTTCCCC--------CCSEEHHHHHHH---HSCTTTEEEEEEHHHHHHTT--CCHHHHH
T ss_pred HHcCCE-EEEecCcccccccccccccccccccccccCCChHHHHHHHH---hCCcccEEEEEeHHHHHHcC--CCHHHHH
Confidence 999974 5552221100 12233333333 345553433 2554211000 0122333
Q ss_pred HHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhccc
Q 006969 273 KANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (623)
Q Consensus 273 ~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~ 338 (623)
++ +.+ -...+|.+| -.-+|. .|+.+...++..|+..|.
T Consensus 234 ~~-~~~---ri~~vHlkD-----------------------~~~~G~-~G~id~~~i~~~L~~~gy 271 (305)
T 3obe_A 234 EN-YPN---RFKLLHIKD-----------------------RWIIGD-SGMMNFPNIFKKAYEIGI 271 (305)
T ss_dssp HH-STT---TEEEEEECC-----------------------SSSTTC-SSSBCHHHHHHHHHHHTC
T ss_pred HH-hhC---ceeEEEecc-----------------------CcCCCC-CCccCHHHHHHHHHHcCC
Confidence 33 322 246889998 233451 489999999999998764
No 69
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=93.66 E-value=1 Score=44.33 Aligned_cols=154 Identities=16% Similarity=0.186 Sum_probs=96.7
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCC
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~ 177 (623)
.+.++-+++++.|.+.|++.||+.+- ++...+.++.+++..++. ..-.+. -...++++.|+++ |.
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k--~~~~~~~i~~l~~~~~~l--------~vgaGt-vl~~d~~~~A~~a----GA 90 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFR--SEAAADAIRLLRANRPDF--------LIAAGT-VLTAEQVVLAKSS----GA 90 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT--STTHHHHHHHHHHHCTTC--------EEEEES-CCSHHHHHHHHHH----TC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecc--CchHHHHHHHHHHhCcCc--------EEeeCc-EeeHHHHHHHHHC----CC
Confidence 46677889999999999999999874 344567888888764321 111221 2245778888876 88
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcc
Q 006969 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV 257 (623)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTv 257 (623)
+-||. +..+ .+.++.++++|.. +..+ -.+++.+ ..+.++|+|.|.+
T Consensus 91 d~v~~--p~~d------------------~~v~~~ar~~g~~-~i~G-----v~t~~e~----~~A~~~Gad~vk~---- 136 (224)
T 1vhc_A 91 DFVVT--PGLN------------------PKIVKLCQDLNFP-ITPG-----VNNPMAI----EIALEMGISAVKF---- 136 (224)
T ss_dssp SEEEC--SSCC------------------HHHHHHHHHTTCC-EECE-----ECSHHHH----HHHHHTTCCEEEE----
T ss_pred CEEEE--CCCC------------------HHHHHHHHHhCCC-EEec-----cCCHHHH----HHHHHCCCCEEEE----
Confidence 88863 2222 2467788888876 3222 2334543 3456889998877
Q ss_pred cccCHHH-H--HHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHh-CCCEE
Q 006969 258 GITMPTE-F--GKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA-GARQV 310 (623)
Q Consensus 258 G~~~P~~-v--~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~a-GA~~V 310 (623)
.|.+ + -+.++.++..+|+ +|+-. .-|.-..|.-.-+.+ |+..|
T Consensus 137 ---Fpa~~~gG~~~lk~l~~~~~~---ipvva----iGGI~~~N~~~~l~agga~~v 183 (224)
T 1vhc_A 137 ---FPAEASGGVKMIKALLGPYAQ---LQIMP----TGGIGLHNIRDYLAIPNIVAC 183 (224)
T ss_dssp ---TTTTTTTHHHHHHHHHTTTTT---CEEEE----BSSCCTTTHHHHHTSTTBCCE
T ss_pred ---eeCccccCHHHHHHHHhhCCC---CeEEE----ECCcCHHHHHHHHhcCCCEEE
Confidence 2311 1 4677888887764 44432 134445577777777 65544
No 70
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=93.62 E-value=0.85 Score=49.36 Aligned_cols=197 Identities=12% Similarity=0.023 Sum_probs=121.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEE-EEec---------CCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccc----
Q 006969 97 TLTSKEKLDIARQLAKLGVDII-EAGF---------PAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCN---- 161 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~I-EvGf---------P~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~---- 161 (623)
..+.+.-..+++.-.+.+-..| |+.. -+..|.++ .+++.+++..+-.+ -|.+..+=-..
T Consensus 28 ~~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~~~vPv------~pV~LhlDHg~~~~w 101 (450)
T 3txv_A 28 SAHPLVIEAAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRFVGAIADRIEFPR------EKILLGGDHLGPNPW 101 (450)
T ss_dssp CCCHHHHHHHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHHHHHHHHHTTCCG------GGEEEEEEEESSGGG
T ss_pred cCCHHHHHHHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHHHHHHHHHcCcCc------ccEEEECCCCCCccc
Confidence 4678888889999999988754 6542 11224554 66777777542110 01233322211
Q ss_pred ------------hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC----eE--EE
Q 006969 162 ------------ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD----DV--EF 223 (623)
Q Consensus 162 ------------~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~----~V--~f 223 (623)
.+.|..+++ +|...|++=.|..+ .+.+..+|.+-+.++..+++++|++.+.. .+ +.
T Consensus 102 ~~~~~~~am~~a~e~i~~aI~----AGFtSVMiD~S~~p--~eeNi~lt~evva~rtaeL~~~A~~~~~~~g~~e~~yvi 175 (450)
T 3txv_A 102 KHLPADEAMAKAEAMITAYAK----AGFTKLHLDTSMGC--AGEPTALPDATTAARAARLAAVAEDAVGGRGGVLPVYII 175 (450)
T ss_dssp TTSCHHHHHHHHHHHHHHHHT----TTCCEEEECCCBCC--SSSCSBCCHHHHHHHHHHHHHHHHHTC------CCEEEE
T ss_pred ccccHHHHHHHHHHHHHHHHH----cCCCEEEECCCCCc--hhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCceEEe
Confidence 233333333 59999987555544 24567889998999999999999985332 12 23
Q ss_pred cccCC------------CCCCHHHHHHHHHH----HHHcCCc-----EEeecCccccc---------CHHHHHHHHHHHH
Q 006969 224 SPEDA------------GRSDRKFLYEILGE----VIKVGAT-----TLNIPDTVGIT---------MPTEFGKLIADIK 273 (623)
Q Consensus 224 ~~eda------------~r~d~e~l~~~~~~----~~~aGa~-----~I~l~DTvG~~---------~P~~v~~li~~l~ 273 (623)
+-|+. .-|+|+.+.++++. +.+.|.+ .+.|+=-.|.. .|+... .|+
T Consensus 176 GtEvpvpGGa~~~~~~~~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~~~----~L~ 251 (450)
T 3txv_A 176 GTEVPIPGGALEELDTLEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRARAE----KLS 251 (450)
T ss_dssp ECC-------------CCCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTTTS----HHH
T ss_pred eeecCCCCccccccccCCCCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHHHH----HHH
Confidence 44431 36889888777764 4445553 44444334433 233333 344
Q ss_pred HhCCCCccee-EEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 274 ANTPGIENVV-ISTHCQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 274 ~~~~~~~~v~-i~~H~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
+.++ ++| |.+|.|++-|..-.+-..+++.|...+.+
T Consensus 252 ~~v~---~~P~LVlhghStDy~~~e~l~~~V~~GiaklNV 288 (450)
T 3txv_A 252 ATLG---QLHGMVFEAHSTDYQTPDALRELVADGFAILKV 288 (450)
T ss_dssp HGGG---TSTTCEEEESCCTTCCHHHHHHHHHTTEEEEEE
T ss_pred HHhc---cCCCEEEecCCCCCCCHHHHHHHHHcCCcEEEE
Confidence 4442 244 99999999999999999999999998865
No 71
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=93.58 E-value=1.8 Score=45.39 Aligned_cols=127 Identities=21% Similarity=0.223 Sum_probs=79.3
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceE--------EeecccchhhH----
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVI--------CGLSRCNERDI---- 165 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i--------~~~~r~~~~dI---- 165 (623)
.+.+.-++=++.|.++|.|.|.++.|. +++.++++.|.+.....+..|.-|.+.+ +..-|-|+-.|
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp~--~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~dklRINPGNig~~~ 120 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVPH--KEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHGIRINPGNIGKEE 120 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECCS--HHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSEEEECHHHHSCHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCCC--hHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCCCeEEECCcccCchh
Confidence 678888888999999999999999984 6778899999886432211110011100 00113333333
Q ss_pred --HHHHHHHhcCCCC-EEEEEecCCHHHHHHHhC-CCHHHHHHHHHHHHHHHHHcCCCeEEEccc
Q 006969 166 --KTAWEAVKYAKRP-RIHTFIATSGIHMEHKLR-KTKQQVVEIARSMVKFARSLGCDDVEFSPE 226 (623)
Q Consensus 166 --~~a~eal~~a~~~-~v~i~~~~Sd~h~~~~l~-~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e 226 (623)
+.-+++.++.+++ ||.+-..+-+-++..+++ -+.+..++-+.+.++.+.++|+..+.+|+-
T Consensus 121 ~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~K 185 (366)
T 3noy_A 121 IVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVSIK 185 (366)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEeee
Confidence 3334444555665 455544444445556665 577778888888888888888876667663
No 72
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=93.48 E-value=2.4 Score=44.52 Aligned_cols=179 Identities=14% Similarity=0.154 Sum_probs=108.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEe--------cCCC----------Ch--------hHHHHHHHHHHHhccccccCCCc
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAG--------FPAA----------SK--------EDFEAVRTIAKEVGNAVDAESGY 150 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvG--------fP~~----------s~--------~d~e~v~~i~~~~~~~~~~~~~l 150 (623)
.=+.+.-+++++...++|.|.+=.+ .|.+ +. -.++..+.|.+..... |+
T Consensus 31 ~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~-----Gi 105 (349)
T 2wqp_A 31 EGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESK-----GM 105 (349)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHT-----TC
T ss_pred cCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHh-----CC
Confidence 3389999999999999999999988 2321 00 0123334444332111 22
Q ss_pred cceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCC
Q 006969 151 VPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGR 230 (623)
Q Consensus 151 ~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r 230 (623)
. .++ +....++++...+ .+++.+.| ++.++ + ++ .+++++-+.|.. |..+- +-
T Consensus 106 ~-~~s--t~~d~~svd~l~~----~~v~~~KI--~S~~~--------~---n~----~LL~~va~~gkP-viLst---Gm 157 (349)
T 2wqp_A 106 I-FIS--TLFSRAAALRLQR----MDIPAYKI--GSGEC--------N---NY----PLIKLVASFGKP-IILST---GM 157 (349)
T ss_dssp E-EEE--EECSHHHHHHHHH----HTCSCEEE--CGGGT--------T---CH----HHHHHHHTTCSC-EEEEC---TT
T ss_pred e-EEE--eeCCHHHHHHHHh----cCCCEEEE--Ccccc--------c---CH----HHHHHHHhcCCe-EEEEC---CC
Confidence 1 111 1123444544333 25666654 33321 1 12 345666667876 77754 23
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHH--HHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCC
Q 006969 231 SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKL--IADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 308 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~l--i~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~ 308 (623)
++.+.+...++.+.+.|.+.+-+-=|.++-+|.+..+| |..|++.+|+ ++|++=-|- .| .+-+++|+.+||+
T Consensus 158 at~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~---lpVg~sdHt-~G--~~~~~AAvAlGA~ 231 (349)
T 2wqp_A 158 NSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPD---AIIGLSDHT-LD--NYACLGAVALGGS 231 (349)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTT---SEEEEECCS-SS--SHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCC---CCEEeCCCC-Cc--HHHHHHHHHhCCC
Confidence 57888888888888888844333235566566555544 8889998863 678886665 34 7888999999999
Q ss_pred EEEecc
Q 006969 309 QVEVTI 314 (623)
Q Consensus 309 ~Vd~Tv 314 (623)
.|+.=+
T Consensus 232 iIEkH~ 237 (349)
T 2wqp_A 232 ILERHF 237 (349)
T ss_dssp EEEEEB
T ss_pred EEEeCC
Confidence 986543
No 73
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=93.33 E-value=4.4 Score=40.79 Aligned_cols=197 Identities=16% Similarity=0.059 Sum_probs=114.6
Q ss_pred eEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecc
Q 006969 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR 159 (623)
Q Consensus 80 v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r 159 (623)
...+|-||= +-..|.++..++.+...+.|+.-+-+ +|.. ++...+.+... . ..+..+.+|--
T Consensus 44 a~~IDhTlL------~p~~t~~~I~~lc~eA~~~~~aaVCV-~p~~-------V~~a~~~L~gs---~-v~v~tVigFP~ 105 (260)
T 3r12_A 44 KSAIEHTNL------KPFATPDDIKKLCLEARENRFHGVCV-NPCY-------VKLAREELEGT---D-VKVVTVVGFPL 105 (260)
T ss_dssp HHHEEEEEC------CTTCCHHHHHHHHHHHHHTTCSEEEE-CGGG-------HHHHHHHHTTS---C-CEEEEEESTTT
T ss_pred HHhcCcccC------CCCCCHHHHHHHHHHHHhcCCcEEEE-CHHH-------HHHHHHHhcCC---C-CeEEEEecCCC
Confidence 346777772 33578999999999999999999998 6643 33333333221 0 01222333321
Q ss_pred cc-hhhHH--HHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHH
Q 006969 160 CN-ERDIK--TAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFL 236 (623)
Q Consensus 160 ~~-~~dI~--~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l 236 (623)
.. ...++ .+-+++. .|++.|.+.+.... -.....+++.+.+...++.+. |. .+-+-.|. ...+.+.+
T Consensus 106 G~~~~~~Kv~Ea~~Ai~-~GAdEIDmViNig~-----lk~g~~~~v~~eI~~v~~a~~--~~-~lKVIlEt-~~Lt~eei 175 (260)
T 3r12_A 106 GANETRTKAHEAIFAVE-SGADEIDMVINVGM-----LKAKEWEYVYEDIRSVVESVK--GK-VVKVIIET-CYLDTEEK 175 (260)
T ss_dssp CCSCHHHHHHHHHHHHH-HTCSEEEEECCHHH-----HHTTCHHHHHHHHHHHHHHTT--TS-EEEEECCG-GGCCHHHH
T ss_pred CCCcHHHHHHHHHHHHH-cCCCEEEEEeehhh-----hccccHHHHHHHHHHHHHhcC--CC-cEEEEEeC-CCCCHHHH
Confidence 11 11221 1223333 38999999876542 122356677777777777654 32 23333332 24566889
Q ss_pred HHHHHHHHHcCCcEEeecC--cccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 006969 237 YEILGEVIKVGATTLNIPD--TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~D--TvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 313 (623)
...++.+.++|||-|--.- ..|.++++.+.-+-+.+...+ .+..+==.+ + ...+++-+++||++|=+|
T Consensus 176 ~~A~~ia~eaGADfVKTSTGf~~~GAT~edV~lm~~~vg~~v----~VKaAGGIr-t----~~~al~mi~aGA~RiGtS 245 (260)
T 3r12_A 176 IAACVISKLAGAHFVKTSTGFGTGGATAEDVHLMKWIVGDEM----GVKASGGIR-T----FEDAVKMIMYGADRIGTS 245 (260)
T ss_dssp HHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHCTTS----EEEEESSCC-S----HHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHhCcCEEEcCCCCCCCCCCHHHHHHHHHHhCCCc----eEEEeCCCC-C----HHHHHHHHHcCCceeecc
Confidence 9999999999999988762 124678877665544432211 122221112 2 267777799999987443
No 74
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=93.31 E-value=0.92 Score=46.42 Aligned_cols=102 Identities=17% Similarity=0.154 Sum_probs=70.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecCccccc---CHHHHHHHHHHHHHhCCCC-cceeEEEeecCCcchHHHHHHHHHH
Q 006969 229 GRSDRKFLYEILGEVIKVGATTLNIPDTVGIT---MPTEFGKLIADIKANTPGI-ENVVISTHCQNDLGLSTANTIAGAC 304 (623)
Q Consensus 229 ~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~---~P~~v~~li~~l~~~~~~~-~~v~i~~H~HND~GlAvANslaAv~ 304 (623)
+..+.+--..-++.+++.||+.|-+.=-+|.+ .-..+.+-|+.+++..++. -+++|+.-..+|--..- -+..|++
T Consensus 121 G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~-A~~ia~e 199 (288)
T 3oa3_A 121 GTYSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIA-GCVLSSL 199 (288)
T ss_dssp SCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHH-HHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHH-HHHHHHH
Confidence 34455555666777889999999877667763 4467888888888865431 14566665555554433 4678899
Q ss_pred hCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 305 AGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 305 aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
+|||.|-+| .|.+ .|++.+|++....+
T Consensus 200 aGADfVKTS-TGf~--~~GAT~edv~lmr~ 226 (288)
T 3oa3_A 200 AGADYVKTS-TGFN--GPGASIENVSLMSA 226 (288)
T ss_dssp TTCSEEECC-CSSS--SCCCCHHHHHHHHH
T ss_pred cCCCEEEcC-CCCC--CCCCCHHHHHHHHH
Confidence 999999999 7776 57899988654443
No 75
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=93.16 E-value=6.9 Score=39.76 Aligned_cols=162 Identities=15% Similarity=0.206 Sum_probs=90.4
Q ss_pred eEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEec----CCCC----hhHHHHHHHHHHHhccccccCCCcc
Q 006969 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDAESGYV 151 (623)
Q Consensus 80 v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGf----P~~s----~~d~e~v~~i~~~~~~~~~~~~~l~ 151 (623)
+=|+-+|.. -.+--|..++.+.-++.++.+.+.|.|+|.+|. |.+. .+|.+.+..+.+.+.... +
T Consensus 18 mGilN~Tpd-SFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~----~-- 90 (282)
T 1aj0_A 18 MGILNVTPD-SFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF----E-- 90 (282)
T ss_dssp EEEEECCTT-TSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC----C--
T ss_pred EEEEeCCCC-ccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc----C--
Confidence 445666652 222223456889999999999999999999996 4422 344554544444332110 1
Q ss_pred ceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCC
Q 006969 152 PVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRS 231 (623)
Q Consensus 152 ~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~ 231 (623)
..|+.=+ .+.+-++.|+++ |.+.|. .+|-. . ..++++.++++|+. +...+..+...
T Consensus 91 ~piSIDT-~~~~va~aAl~a----Ga~iIN---dvsg~-------~--------d~~~~~~~a~~~~~-vVlmh~~G~p~ 146 (282)
T 1aj0_A 91 VWISVDT-SKPEVIRESAKV----GAHIIN---DIRSL-------S--------EPGALEAAAETGLP-VCLMHMQGNPK 146 (282)
T ss_dssp CEEEEEC-CCHHHHHHHHHT----TCCEEE---ETTTT-------C--------STTHHHHHHHHTCC-EEEECCSSCTT
T ss_pred CeEEEeC-CCHHHHHHHHHc----CCCEEE---ECCCC-------C--------CHHHHHHHHHhCCe-EEEEccCCCCc
Confidence 1232222 355666777665 777664 34321 0 11345566777876 44433221111
Q ss_pred C--------------HHHHHHHHHHHHHcCCc--EEeecCc-cccc-CHHHHHHHHHHHH
Q 006969 232 D--------------RKFLYEILGEVIKVGAT--TLNIPDT-VGIT-MPTEFGKLIADIK 273 (623)
Q Consensus 232 d--------------~e~l~~~~~~~~~aGa~--~I~l~DT-vG~~-~P~~v~~li~~l~ 273 (623)
+ .+++.+.++.+.++|.. .|.| |. +|.. ++++-.++++.+.
T Consensus 147 tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~Iil-DPg~gf~k~~~~n~~ll~~l~ 205 (282)
T 1aj0_A 147 TMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLL-DPGFGFGKNLSHNYSLLARLA 205 (282)
T ss_dssp CCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCTTSSCCHHHHHHHHHTGG
T ss_pred cccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEE-eCCCCcccCHHHHHHHHHHHH
Confidence 1 68888888899999986 3444 32 2222 3455555655554
No 76
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=93.09 E-value=0.59 Score=49.76 Aligned_cols=138 Identities=14% Similarity=0.218 Sum_probs=89.0
Q ss_pred HHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCCEEEEE--ec
Q 006969 108 RQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTF--IA 185 (623)
Q Consensus 108 ~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~--~~ 185 (623)
+.|.++|++.+-+|+.- =+++..++.+++. + .|.|..-+.+..++|+.|++.+...|.+.|.+. ++
T Consensus 128 d~l~~~~vd~~KIgS~~--~~N~pLL~~va~~-g---------KPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s 195 (385)
T 1vli_A 128 DLLQSTSPSAFKIASYE--INHLPLLKYVARL-N---------RPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVA 195 (385)
T ss_dssp HHHHTTCCSCEEECGGG--TTCHHHHHHHHTT-C---------SCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECS
T ss_pred HHHHhcCCCEEEECccc--ccCHHHHHHHHhc-C---------CeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccC
Confidence 44455566666665432 2356777777763 1 267777777889999999999988887655553 22
Q ss_pred CCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEe--------e--
Q 006969 186 TSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLN--------I-- 253 (623)
Q Consensus 186 ~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~--G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~--------l-- 253 (623)
+-+.- ...++. .+|..+|+. ++. |.|+--..++ ..+..+++.+||+.|- +
T Consensus 196 ~YPtp-~~~~nL----------~aI~~Lk~~f~~lp-VG~SdHt~G~------~~~~~AAvAlGA~iIEkHftldra~~G 257 (385)
T 1vli_A 196 KYPAP-PEYSNL----------SVIPMLAAAFPEAV-IGFSDHSEHP------TEAPCAAVRLGAKLIEKHFTIDKNLPG 257 (385)
T ss_dssp SSSCC-GGGCCT----------THHHHHHHHSTTSE-EEEEECCSSS------SHHHHHHHHTTCSEEEEEBCSCTTSSC
T ss_pred CCCCC-hhhcCH----------HHHHHHHHHcCCCC-EEeCCCCCCc------hHHHHHHHHcCCCEEEeCCCccccCCC
Confidence 22210 112222 234444443 564 7664322333 5678888899998763 5
Q ss_pred cCcccccCHHHHHHHHHHHHHh
Q 006969 254 PDTVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 254 ~DTvG~~~P~~v~~li~~l~~~ 275 (623)
+|-.=.+.|.++.+|++.+++.
T Consensus 258 ~D~~~SL~P~ef~~lv~~ir~i 279 (385)
T 1vli_A 258 ADHSFALNPDELKEMVDGIRKT 279 (385)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHH
T ss_pred CchhhhCCHHHHHHHHHHHHHH
Confidence 7888899999999999999863
No 77
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=92.92 E-value=6 Score=41.05 Aligned_cols=162 Identities=14% Similarity=0.119 Sum_probs=98.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCC----ChhH-HHHHHHHHHHhccccccCCCccceEEeeccc-chhhHHHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAA----SKED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWE 170 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~----s~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~e 170 (623)
..+.+.-..+.+.-.+++-+.|=-.+|.. +... ...++..++.. . -+|...=+=-+ ..+.+..+++
T Consensus 25 v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~-~-------~VPValHlDHg~~~e~i~~ai~ 96 (323)
T 2isw_A 25 VNNMEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKH-P-------DIPICIHLDHGDTLESVKMAID 96 (323)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHC-T-------TSCEEEEEEEECSHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHHhCCHHHHHHHHHHHHHhc-C-------CCcEEEECCCCCCHHHHHHHHH
Confidence 45789999999999999999774444431 1111 13334444320 0 13443333332 3456666666
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------cccC-----CCCCCHHHHHHH
Q 006969 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPED-----AGRSDRKFLYEI 239 (623)
Q Consensus 171 al~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~~ed-----a~r~d~e~l~~~ 239 (623)
+ |...|-+ . .| ..+.|||++..++.+++|+..|+. |+- +-|| ...|||+.+.++
T Consensus 97 ~----GFtSVMi-D-gS--------~~p~eENi~~Tk~vv~~ah~~gvs-VEaELG~vgg~Ed~v~~~~~yTdPeea~~F 161 (323)
T 2isw_A 97 L----GFSSVMI-D-AS--------HHPFDENVRITKEVVAYAHARSVS-VEAELGTLGGIEEDVQNTVQLTEPQDAKKF 161 (323)
T ss_dssp T----TCSEEEE-C-CT--------TSCHHHHHHHHHHHHHHHHTTTCE-EEEEESCC----------CCCCCHHHHHHH
T ss_pred c----CCCeEEe-c-CC--------CCCHHHHHHHHHHHHHHHHHcCCe-EEEEeCCccCCccCcccccccCCHHHHHHH
Confidence 4 8887644 2 23 247899999999999999999974 532 2232 345999998888
Q ss_pred HHHHHHcCCcEEeec--CcccccC-HHHH-----HHHHHHHHHhCCCCcceeEEEee
Q 006969 240 LGEVIKVGATTLNIP--DTVGITM-PTEF-----GKLIADIKANTPGIENVVISTHC 288 (623)
Q Consensus 240 ~~~~~~aGa~~I~l~--DTvG~~~-P~~v-----~~li~~l~~~~~~~~~v~i~~H~ 288 (623)
+++ -|+|.+-++ -.=|... |..- .++++.+++.++ +||-+|.
T Consensus 162 v~~---TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~----vpLVlHG 211 (323)
T 2isw_A 162 VEL---TGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTG----IPLVMHG 211 (323)
T ss_dssp HHH---HCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHC----SCEEECS
T ss_pred HHH---HCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhC----CCeEEEC
Confidence 875 588865554 3334332 1222 257777787773 6799997
No 78
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=92.90 E-value=0.57 Score=45.45 Aligned_cols=152 Identities=16% Similarity=0.160 Sum_probs=94.1
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCC
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~ 178 (623)
+.++-+++++.|.+.|++.||+.+- .+...+.++.+.+ .+. ..-.+. -...++++.++++ |.+
T Consensus 23 ~~~~~~~~~~~l~~gGv~~iel~~k--~~~~~~~i~~~~~--~~~--------~~gag~-vl~~d~~~~A~~~----GAd 85 (207)
T 2yw3_A 23 GGEDLLGLARVLEEEGVGALEITLR--TEKGLEALKALRK--SGL--------LLGAGT-VRSPKEAEAALEA----GAA 85 (207)
T ss_dssp SCCCHHHHHHHHHHTTCCEEEEECS--STHHHHHHHHHTT--SSC--------EEEEES-CCSHHHHHHHHHH----TCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCC--ChHHHHHHHHHhC--CCC--------EEEeCe-EeeHHHHHHHHHc----CCC
Confidence 3345678999999999999999863 3444566766655 221 111121 2245778888776 888
Q ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCccc
Q 006969 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG 258 (623)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG 258 (623)
-||.. ..+ .+.++.++..|.. +..+. .+++.+ ..+.++|+|.|.+
T Consensus 86 ~v~~~--~~d------------------~~v~~~~~~~g~~-~i~G~-----~t~~e~----~~A~~~Gad~v~~----- 130 (207)
T 2yw3_A 86 FLVSP--GLL------------------EEVAALAQARGVP-YLPGV-----LTPTEV----ERALALGLSALKF----- 130 (207)
T ss_dssp EEEES--SCC------------------HHHHHHHHHHTCC-EEEEE-----CSHHHH----HHHHHTTCCEEEE-----
T ss_pred EEEcC--CCC------------------HHHHHHHHHhCCC-EEecC-----CCHHHH----HHHHHCCCCEEEE-----
Confidence 88743 221 1456777788875 33332 234443 3455789998877
Q ss_pred ccCHHHH---HHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEE
Q 006969 259 ITMPTEF---GKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 311 (623)
Q Consensus 259 ~~~P~~v---~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd 311 (623)
.|.+. .++++.++..+|+ +|+-. .-|....|.-..+.+||+.|-
T Consensus 131 --fpa~~~gG~~~lk~l~~~~~~---ipvva----iGGI~~~n~~~~l~aGa~~va 177 (207)
T 2yw3_A 131 --FPAEPFQGVRVLRAYAEVFPE---VRFLP----TGGIKEEHLPHYAALPNLLAV 177 (207)
T ss_dssp --TTTTTTTHHHHHHHHHHHCTT---CEEEE----BSSCCGGGHHHHHTCSSBSCE
T ss_pred --ecCccccCHHHHHHHHhhCCC---CcEEE----eCCCCHHHHHHHHhCCCcEEE
Confidence 22211 2567888887764 45532 234445688888899988753
No 79
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=92.83 E-value=2 Score=45.69 Aligned_cols=98 Identities=20% Similarity=0.251 Sum_probs=69.6
Q ss_pred HHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecC-cccccCHHHHHHH--HHHHHHhCCCCcceeE
Q 006969 208 SMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPD-TVGITMPTEFGKL--IADIKANTPGIENVVI 284 (623)
Q Consensus 208 ~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~D-TvG~~~P~~v~~l--i~~l~~~~~~~~~v~i 284 (623)
.+++++-+.|.. |..+- +.++.+.+...++.+.+.|...|.|+- |.++-+|.+..+| |..|++.+|+ ++|
T Consensus 149 pLL~~va~~gKP-ViLSt---GmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~---lpV 221 (385)
T 1vli_A 149 PLLKYVARLNRP-MIFST---AGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPE---AVI 221 (385)
T ss_dssp HHHHHHHTTCSC-EEEEC---TTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTT---SEE
T ss_pred HHHHHHHhcCCe-EEEEC---CCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCC---CCE
Confidence 355666667876 77764 235888888888888889986666642 5556566665554 8889998864 567
Q ss_pred EEeecCCcchHHHHHHHHHHhCCCEEEecc
Q 006969 285 STHCQNDLGLSTANTIAGACAGARQVEVTI 314 (623)
Q Consensus 285 ~~H~HND~GlAvANslaAv~aGA~~Vd~Tv 314 (623)
++=-|- .|- .+-+++|+.+||+.|+.=+
T Consensus 222 G~SdHt-~G~-~~~~~AAvAlGA~iIEkHf 249 (385)
T 1vli_A 222 GFSDHS-EHP-TEAPCAAVRLGAKLIEKHF 249 (385)
T ss_dssp EEEECC-SSS-SHHHHHHHHTTCSEEEEEB
T ss_pred EeCCCC-CCc-hHHHHHHHHcCCCEEEeCC
Confidence 876665 342 7788999999999986644
No 80
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=92.76 E-value=0.32 Score=47.55 Aligned_cols=169 Identities=14% Similarity=0.083 Sum_probs=91.0
Q ss_pred HHHHHHHHHhHcCCCEEEEec------CCCChhHHHHHHHHHHHhccccccCCCccceEEeecccch-hhHHHHHHHHhc
Q 006969 102 EKLDIARQLAKLGVDIIEAGF------PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNE-RDIKTAWEAVKY 174 (623)
Q Consensus 102 ~Kl~Ia~~L~~~Gvd~IEvGf------P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~-~dI~~a~eal~~ 174 (623)
+-.+.++.|.+.|++.||++. |... .-.+.++.|.+..+. +..+.+--... +.++.+ ..
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~-~~~~~i~~l~~~~~~---------~~~v~l~vnd~~~~v~~~----~~ 89 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDGRFVPNIT-IGPLVVDSLRPITDL---------PLDVHLMIVEPDQRVPDF----IK 89 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCBC-CCHHHHHHHGGGCCS---------CEEEEEESSSHHHHHHHH----HH
T ss_pred HHHHHHHHHHHCCCCEEEEeeccCCcccccc-cCHHHHHHHHhccCC---------cEEEEEEecCHHHHHHHH----HH
Confidence 456778889999999999983 4332 235667776654211 22222211111 234444 34
Q ss_pred CCCCEEEEEec--CCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEe
Q 006969 175 AKRPRIHTFIA--TSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLN 252 (623)
Q Consensus 175 a~~~~v~i~~~--~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~ 252 (623)
+|++.|++-.. .++ ...+.++.+++.|+. +.+..- ..++.+.+..+ ..++|.|
T Consensus 90 ~Gad~v~vh~~~~~~~----------------~~~~~~~~~~~~g~~-ig~~~~--p~t~~e~~~~~-----~~~~d~v- 144 (230)
T 1rpx_A 90 AGADIVSVHCEQSSTI----------------HLHRTINQIKSLGAK-AGVVLN--PGTPLTAIEYV-----LDAVDLV- 144 (230)
T ss_dssp TTCSEEEEECSTTTCS----------------CHHHHHHHHHHTTSE-EEEEEC--TTCCGGGGTTT-----TTTCSEE-
T ss_pred cCCCEEEEEecCccch----------------hHHHHHHHHHHcCCc-EEEEeC--CCCCHHHHHHH-----HhhCCEE-
Confidence 69999877654 322 123566777777864 444331 12343333222 2578866
Q ss_pred ecCcc-----cccCHHHHHHHHHHHHHhCCC-CcceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 006969 253 IPDTV-----GITMPTEFGKLIADIKANTPG-IENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (623)
Q Consensus 253 l~DTv-----G~~~P~~v~~li~~l~~~~~~-~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 313 (623)
+.|++ |...++...+.++.+++.++. ..++++.+ +.|.-..|.-.++++||+.|.+.
T Consensus 145 l~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v----~GGI~~~n~~~~~~aGad~vvvg 207 (230)
T 1rpx_A 145 LIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEV----DGGVGPKNAYKVIEAGANALVAG 207 (230)
T ss_dssp EEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEE----ESSCCTTTHHHHHHHTCCEEEES
T ss_pred EEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEE----ECCCCHHHHHHHHHcCCCEEEEC
Confidence 34554 222334445556666654320 00134433 35555578888899999998664
No 81
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=92.76 E-value=4.7 Score=40.01 Aligned_cols=190 Identities=15% Similarity=0.118 Sum_probs=95.4
Q ss_pred HHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEe----------ecccc-------hhh
Q 006969 102 EKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG----------LSRCN-------ERD 164 (623)
Q Consensus 102 ~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----------~~r~~-------~~d 164 (623)
.-.+.++.+.++|++.||+..+...+.+.+.++.+.+..+-.+ ..+.. ++... .+.
T Consensus 42 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~-------~~~~~~~p~~~~~~~l~~~d~~~r~~~~~~ 114 (290)
T 2zvr_A 42 DLRKGMELAKRVGYQAVEIAVRDPSIVDWNEVKILSEELNLPI-------CAIGTGQAYLADGLSLTHPNDEIRKKAIER 114 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECSCGGGSCHHHHHHHHHHHTCCE-------EEEECTHHHHTTCCCTTCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCEEEEcCCCcchhhHHHHHHHHHHcCCeE-------EEEeccCccccCCCCCCCCCHHHHHHHHHH
Confidence 3445566667789999999765433455666666665432211 12222 11011 123
Q ss_pred HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccC------CCCCCHHHHHH
Q 006969 165 IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED------AGRSDRKFLYE 238 (623)
Q Consensus 165 I~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ed------a~r~d~e~l~~ 238 (623)
++++++..+..|.+.|. .+.+.. .-+.+.++.++.+.+.++.+.+...+ |.+..|. ..-.+++.+.+
T Consensus 115 ~~~~i~~A~~lG~~~v~--~~~~g~----~~~~~~~~~~~~~~~~l~~l~~~a~~-v~l~lEn~~~~~~~~~~~~~~~~~ 187 (290)
T 2zvr_A 115 VVKHTEVAGMFGALVII--GLVRGR----REGRSYEETEELFIESMKRLLELTEH-AKFVIEPLNRYETDFINTIDDALR 187 (290)
T ss_dssp HHHHHHHHHHHTCEEEE--SGGGCC----CTTSCHHHHHHHHHHHHHHHHHHCSS-CCEEECCCCTTTCSSCCSHHHHHH
T ss_pred HHHHHHHHHHcCCCEEE--ecCCCC----CCCcCHHHHHHHHHHHHHHHHHHhcc-CEEEEEeCCCcCccccCCHHHHHH
Confidence 44555555556777665 221100 01234556666665555554444322 3333332 12246777777
Q ss_pred HHHHHHHcCCcEEeec-CcccccCH-HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCC
Q 006969 239 ILGEVIKVGATTLNIP-DTVGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTING 316 (623)
Q Consensus 239 ~~~~~~~aGa~~I~l~-DTvG~~~P-~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~G 316 (623)
+++.+ +...+.++ ||.=...- ....+.++.+.. -...+|.+|.. + .-
T Consensus 188 l~~~~---~~~~vgl~~D~~h~~~~g~d~~~~l~~~~~-------~i~~vHl~D~~---------------r------~~ 236 (290)
T 2zvr_A 188 ILRKI---NSNRVGILADTFHMNIEEVNIPESLKRAGE-------KLYHFHVADSN---------------R------WA 236 (290)
T ss_dssp HHHHH---CCTTEEEEEEHHHHHHHCSSHHHHHHHHGG-------GEEEEEECCTT---------------S------SS
T ss_pred HHHHc---CCCCEEEEEehhHhhhcCCCHHHHHHHhhc-------cEEEEEEcCCC---------------C------CC
Confidence 77654 33333332 55311100 112233333322 24688888841 0 12
Q ss_pred ccCccCcccHHHHHHHHHhccc
Q 006969 317 IGERAGNASLEEVVMAFKCRGE 338 (623)
Q Consensus 317 lGERaGNa~lEevv~~L~~~~~ 338 (623)
+|+ |..+.++++..|+..+.
T Consensus 237 ~G~--G~id~~~~~~~L~~~gy 256 (290)
T 2zvr_A 237 PGC--GHFDFRSVFNTLKEIGY 256 (290)
T ss_dssp TTS--SCCCHHHHHHHHHHTTC
T ss_pred CCC--cccCHHHHHHHHHHcCC
Confidence 454 88999999999997653
No 82
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=92.73 E-value=9.6 Score=38.77 Aligned_cols=215 Identities=14% Similarity=0.131 Sum_probs=126.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la- 95 (297)
T 3flu_A 24 SIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVA-------KRVPVIAGTGANNTVEAIALS- 95 (297)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCcCHHHHHHHH-
Confidence 478888899999999999998877 3 355566665 45555555543 3357888877655444 4443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc--CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e--da~r~d~e~l~~~~~~~~~aG 247 (623)
+....+|++.+-+..|-. ++.|.++.++-..+..+. .++..+-|+.- .+...+++.+.+++ + -
T Consensus 96 ~~a~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 160 (297)
T 3flu_A 96 QAAEKAGADYTLSVVPYY-------NKPSQEGIYQHFKTIAEA---TSIPMIIYNVPGRTVVSMTNDTILRLA----E-I 160 (297)
T ss_dssp HHHHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---CCSCEEEEECHHHHSSCCCHHHHHHHT----T-S
T ss_pred HHHHHcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHh---CCCCEEEEECCchhccCCCHHHHHHHH----c-C
Confidence 334567999887765532 245666666655444433 35554555432 23455677665553 3 3
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|- ..++.++++. .++ +..+ +-++++ ..+.++..|++.+ +.| .+|.-.+
T Consensus 161 pnivgiKdssgd--~~~~~~~~~~----~~~--~f~v-~~G~d~------~~l~~l~~G~~G~---is~----~an~~P~ 218 (297)
T 3flu_A 161 PNIVGVKEASGN--IGSNIELINR----APE--GFVV-LSGDDH------TALPFMLCGGHGV---ITV----AANAAPK 218 (297)
T ss_dssp TTEEEEEECSCC--HHHHHHHHHH----SCT--TCEE-EECCGG------GHHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEeCCCC--HHHHHHHHHh----cCC--CeEE-EECcHH------HHHHHHhCCCCEE---Eec----hHhhhHH
Confidence 578999999884 4555555443 332 1222 334332 2566788898754 333 4677777
Q ss_pred HHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhC
Q 006969 328 EVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTG 365 (623)
Q Consensus 328 evv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g 365 (623)
.++...+.. ..=|+++-.++-+.+..+..
T Consensus 219 ~~~~l~~a~---------~~Gd~~~A~~l~~~l~~l~~ 247 (297)
T 3flu_A 219 LFADMCRAA---------LQGDIALARELNDRLIPIYD 247 (297)
T ss_dssp HHHHHHHHH---------HHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH---------HCCCHHHHHHHHHHHHHHHH
Confidence 666555431 11244555555555555543
No 83
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=92.71 E-value=3.8 Score=41.89 Aligned_cols=191 Identities=19% Similarity=0.154 Sum_probs=117.9
Q ss_pred cCCCCC--CCCCHHHHHHHHHHHhHcCCCEEEEecCCC-----ChhH-HHHHHHHHHHhccccccCCCccceEEeeccc-
Q 006969 90 GEQSPG--ATLTSKEKLDIARQLAKLGVDIIEAGFPAA-----SKED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRC- 160 (623)
Q Consensus 90 G~Q~~g--~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~-----s~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~- 160 (623)
+.+.-+ ...+.+.-..+++.-.+++-+.|=-.+|.. .... ...++.+++...- -+|...=+=-+
T Consensus 19 ~~yAV~AfNv~n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~-------~VPValHlDHg~ 91 (288)
T 3q94_A 19 GKYAVGQFNMNNLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNI-------TVPVAIHLDHGS 91 (288)
T ss_dssp HTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTC-------CSCEEEEEEEEC
T ss_pred CCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCC-------CCcEEEECCCCC
Confidence 444443 245789999999999999999774434421 2211 1344445542111 13444333333
Q ss_pred chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------cccCC------
Q 006969 161 NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDA------ 228 (623)
Q Consensus 161 ~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~~eda------ 228 (623)
..+.+.+++++ |...|-+ .. | ..+.|||++..++.+++|+..|+. |+- +-||.
T Consensus 92 ~~e~i~~ai~~----GFtSVMi-Dg-S--------~~p~eeNi~~Tk~vv~~ah~~gvs-VEaElG~vgG~Ed~~~~~~~ 156 (288)
T 3q94_A 92 SFEKCKEAIDA----GFTSVMI-DA-S--------HHPFEENVETTKKVVEYAHARNVS-VEAELGTVGGQEDDVIAEGV 156 (288)
T ss_dssp SHHHHHHHHHH----TCSEEEE-CC-T--------TSCHHHHHHHHHHHHHHHHTTTCE-EEEEESBCBCSCSSCGGGGC
T ss_pred CHHHHHHHHHc----CCCeEEE-eC-C--------CCCHHHHHHHHHHHHHHHHHcCCe-EEEEeeeeccccCCcCCccc
Confidence 45667777765 8887644 22 2 147899999999999999999984 642 23332
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeec--Cccccc--CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 006969 229 GRSDRKFLYEILGEVIKVGATTLNIP--DTVGIT--MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (623)
Q Consensus 229 ~r~d~e~l~~~~~~~~~aGa~~I~l~--DTvG~~--~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 304 (623)
..|+|+...++++ +-|+|.+-++ -.=|.. .|.-=.++++.+++.++ +||-+|.= .|.....-..|+.
T Consensus 157 ~yT~Peea~~Fv~---~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~----vpLVlHGg--SG~~~e~i~~ai~ 227 (288)
T 3q94_A 157 IYADPAECKHLVE---ATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTG----VPLVLHGG--TGIPTADIEKAIS 227 (288)
T ss_dssp BCCCHHHHHHHHH---HHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHC----SCEEECCC--TTCCHHHHHHHHH
T ss_pred cCCCHHHHHHHHH---HHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcC----CCEEEeCC--CCCCHHHHHHHHH
Confidence 3699998888776 4588866553 111221 13323356677777764 67887764 4777777778888
Q ss_pred hCCCEEE
Q 006969 305 AGARQVE 311 (623)
Q Consensus 305 aGA~~Vd 311 (623)
.|+.-|+
T Consensus 228 ~Gv~KiN 234 (288)
T 3q94_A 228 LGTSKIN 234 (288)
T ss_dssp TTEEEEE
T ss_pred cCCeEEE
Confidence 8877663
No 84
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=92.65 E-value=2.1 Score=43.07 Aligned_cols=205 Identities=18% Similarity=0.188 Sum_probs=106.5
Q ss_pred ceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecC--C-CChhHHHHHHHHHHHhccccccCCCccceEE
Q 006969 79 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFP--A-ASKEDFEAVRTIAKEVGNAVDAESGYVPVIC 155 (623)
Q Consensus 79 ~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP--~-~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~ 155 (623)
++-+.-.++++.. ...+.++ + +.+.++|++.||+..+ . ..+.+.+.++.+.+.. ++.....
T Consensus 22 klg~~~~~~~~~~----~~~~l~~-l---~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~--------gl~i~~~ 85 (309)
T 2hk0_A 22 KHGIYYSYWEHEW----SAKFGPY-I---EKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDN--------GIILTAG 85 (309)
T ss_dssp EEEEEGGGGCSCT----TSCSHHH-H---HHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHT--------TCEEEEE
T ss_pred eeEEehhhccccc----ccccHHH-H---HHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHc--------CCeEEEe
Confidence 3555555565421 1245555 4 4556789999999753 1 1224455566555543 2211111
Q ss_pred -e------ecccc-------hhhHHHHHHHHhcCCCCEEEEEecC--CHHHHHHHhCC-CH----HHHHHHHHHHHHHHH
Q 006969 156 -G------LSRCN-------ERDIKTAWEAVKYAKRPRIHTFIAT--SGIHMEHKLRK-TK----QQVVEIARSMVKFAR 214 (623)
Q Consensus 156 -~------~~r~~-------~~dI~~a~eal~~a~~~~v~i~~~~--Sd~h~~~~l~~-t~----ee~l~~~~~~v~~ak 214 (623)
. ++... .+.++++++.....|.+.|..+... ... .-.. +. +...+.+.++.++|+
T Consensus 86 ~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~----~~~~~~~~~~~~~~~~~l~~l~~~a~ 161 (309)
T 2hk0_A 86 IGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDIHTIGGALHSYWPID----YSQPVDKAGDYARGVEGINGIADFAN 161 (309)
T ss_dssp CCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCC----TTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeecccccccc----CCCcCChHHHHHHHHHHHHHHHHHHH
Confidence 1 11111 1345566666677799888643200 000 0011 33 344566667778888
Q ss_pred HcCCCeEEEccc----CCCCCCHHHHHHHHHHHHHcCCcEEee-cCcccccCH-HHHHHHHHHHHHhCCCCcceeEEEee
Q 006969 215 SLGCDDVEFSPE----DAGRSDRKFLYEILGEVIKVGATTLNI-PDTVGITMP-TEFGKLIADIKANTPGIENVVISTHC 288 (623)
Q Consensus 215 ~~G~~~V~f~~e----da~r~d~e~l~~~~~~~~~aGa~~I~l-~DTvG~~~P-~~v~~li~~l~~~~~~~~~v~i~~H~ 288 (623)
+.|+. +.+-+. ...-.+++.+.++++.+ +...+.+ .||.=...- ....+.++.+.. -...+|.
T Consensus 162 ~~gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~v---~~~~vg~~~D~~H~~~~g~d~~~~l~~~~~-------~i~~vHl 230 (309)
T 2hk0_A 162 DLGIN-LCIEVLNRFENHVLNTAAEGVAFVKDV---GKNNVKVMLDTFHMNIEEDSFGDAIRTAGP-------LLGHFHT 230 (309)
T ss_dssp HTTCE-EEEECCCTTTCSSCCSHHHHHHHHHHH---TCTTEEEEEEHHHHHHHCSCHHHHHHHHGG-------GEEEEEE
T ss_pred HcCCE-EEEeecccccccccCCHHHHHHHHHHc---CCCCeEEEEehhhHhhcCcCHHHHHHHHHh-------hEEEEEe
Confidence 89974 555332 12234677777777665 3332332 365321110 112233333332 2468899
Q ss_pred cCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcc
Q 006969 289 QNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 289 HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
||... . -+|+ |..+..+++..|+..+
T Consensus 231 ~D~~r-------------------~--~~G~--G~id~~~~~~~L~~~g 256 (309)
T 2hk0_A 231 GESNR-------------------R--VPGK--GRMPWHEIGLALRDIN 256 (309)
T ss_dssp CCTTS-------------------C--CTTS--SCCCHHHHHHHHHHTT
T ss_pred CCCCC-------------------C--CCcC--CccCHHHHHHHHHHcC
Confidence 98621 1 2344 8899999999998765
No 85
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=92.64 E-value=1.3 Score=43.22 Aligned_cols=154 Identities=20% Similarity=0.141 Sum_probs=96.5
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCC
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~ 177 (623)
.+.++-+++++.|.+.|++.||+.+- ++...+.++.+++..+.. ..-.+. -...++++.|+++ |.
T Consensus 25 ~~~~~~~~~~~al~~gGv~~iel~~k--~~~~~~~i~~l~~~~~~~--------~vgagt-vi~~d~~~~A~~a----GA 89 (214)
T 1wbh_A 25 KKLEHAVPMAKALVAGGVRVLNVTLR--TECAVDAIRAIAKEVPEA--------IVGAGT-VLNPQQLAEVTEA----GA 89 (214)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEESC--STTHHHHHHHHHHHCTTS--------EEEEES-CCSHHHHHHHHHH----TC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC--ChhHHHHHHHHHHHCcCC--------EEeeCE-EEEHHHHHHHHHc----CC
Confidence 35667789999999999999999974 344567888887765321 111121 2345778888887 88
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcc
Q 006969 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV 257 (623)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTv 257 (623)
+-||. +..+ .+.++.++.+|.. +..+. .+++.+ ..+.++|+|.|.+
T Consensus 90 d~v~~--p~~d------------------~~v~~~~~~~g~~-~i~G~-----~t~~e~----~~A~~~Gad~v~~---- 135 (214)
T 1wbh_A 90 QFAIS--PGLT------------------EPLLKAATEGTIP-LIPGI-----STVSEL----MLGMDYGLKEFKF---- 135 (214)
T ss_dssp SCEEE--SSCC------------------HHHHHHHHHSSSC-EEEEE-----SSHHHH----HHHHHTTCCEEEE----
T ss_pred CEEEc--CCCC------------------HHHHHHHHHhCCC-EEEec-----CCHHHH----HHHHHCCCCEEEE----
Confidence 88874 2222 2567888889876 33332 234443 3456889998876
Q ss_pred cccCHHH-H--HHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHh-CCCEE
Q 006969 258 GITMPTE-F--GKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA-GARQV 310 (623)
Q Consensus 258 G~~~P~~-v--~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~a-GA~~V 310 (623)
.|.+ + -+.++.++..+|+ +|+-. .-|.-..|.-.-+.+ |+..|
T Consensus 136 ---Fpa~~~gG~~~lk~i~~~~~~---ipvva----iGGI~~~n~~~~l~agg~~~v 182 (214)
T 1wbh_A 136 ---FPAEANGGVKALQAIAGPFSQ---VRFCP----TGGISPANYRDYLALKSVLCI 182 (214)
T ss_dssp ---TTTTTTTHHHHHHHHHTTCTT---CEEEE----BSSCCTTTHHHHHTSTTBSCE
T ss_pred ---ecCccccCHHHHHHHhhhCCC---CeEEE----ECCCCHHHHHHHHhcCCCeEE
Confidence 2211 1 3677888887764 44422 124444577777787 65544
No 86
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=92.57 E-value=6.4 Score=38.61 Aligned_cols=198 Identities=14% Similarity=0.068 Sum_probs=103.3
Q ss_pred HHHHHHhHcCCCEEEEec--C------CCChhHHHHHHHHHHHhccccccCCCccceEEee-------cccc-------h
Q 006969 105 DIARQLAKLGVDIIEAGF--P------AASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL-------SRCN-------E 162 (623)
Q Consensus 105 ~Ia~~L~~~Gvd~IEvGf--P------~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~-------~r~~-------~ 162 (623)
+.++.+.++|++.||+.. | ..++.+.+.++.+.+..+-.+ ..++.+ +... .
T Consensus 16 ~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-------~~~~~h~~~~~~~~~~~~~~r~~~~ 88 (287)
T 2x7v_A 16 RVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDW-------ENAFCHSGYLINLASPKDDIWQKSV 88 (287)
T ss_dssp GHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCG-------GGEEEECCTTCCTTCSSHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCc-------ceeEEecccccccCCCCHHHHHHHH
Confidence 345666788999999932 1 123345566666555432211 012221 1111 1
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH--cCCCeEEEcccCCCC----CCHHHH
Q 006969 163 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS--LGCDDVEFSPEDAGR----SDRKFL 236 (623)
Q Consensus 163 ~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~--~G~~~V~f~~eda~r----~d~e~l 236 (623)
+.++.+++.....|.+.|.+..... .+.+.++.++.+.+.++.+-+ .|+. +.+-+..... .+++.+
T Consensus 89 ~~~~~~i~~A~~lG~~~v~~~~g~~-------~~~~~~~~~~~~~~~l~~l~~~~~gv~-l~lEn~~~~~~~~~~~~~~~ 160 (287)
T 2x7v_A 89 ELLKKEVEICRKLGIRYLNIHPGSH-------LGTGEEEGIDRIVRGLNEVLNNTEGVV-ILLENVSQKGGNIGYKLEQL 160 (287)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCEEC-------TTSCHHHHHHHHHHHHHHHHTTCCSCE-EEEECCCCCTTEECSSHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCC-------CCCCHHHHHHHHHHHHHHHHcccCCCE-EEEeCCCCCCCccCCCHHHH
Confidence 2344455555556888876643321 123567777777777766543 3542 4442221111 367777
Q ss_pred HHHHHHHHHcCC-cEEeec-Ccc-----cc--cCHHHHHHHHHHHHHhCC-CCcceeEEEeecCCcchHHHHHHHHHHhC
Q 006969 237 YEILGEVIKVGA-TTLNIP-DTV-----GI--TMPTEFGKLIADIKANTP-GIENVVISTHCQNDLGLSTANTIAGACAG 306 (623)
Q Consensus 237 ~~~~~~~~~aGa-~~I~l~-DTv-----G~--~~P~~v~~li~~l~~~~~-~~~~v~i~~H~HND~GlAvANslaAv~aG 306 (623)
.++++.+ +- ..+.++ ||. |. ..|..+.++++.+.+.++ + -...+|.||..+- .|
T Consensus 161 ~~l~~~~---~~~~~vg~~~D~~h~~~~g~~~~~~~~~~~~l~~~~~~~g~~---~i~~vH~~D~~~~----------~~ 224 (287)
T 2x7v_A 161 KKIRDLV---DQRDRVAITYDTCHGFDSGYDITKKEGVEALLNEIESLFGLE---RLKMIHLNDSKYP----------LG 224 (287)
T ss_dssp HHHHHHC---SCGGGEEEEEEHHHHHHTTCCTTSHHHHHHHHHHHHHHTCGG---GEEEEEECEESSC----------TT
T ss_pred HHHHHhc---CCCCCeEEEEEhhhHHHcCCCCCchHHHHHHHHHHHHhcCcc---ceeEEEEecCCCc----------cC
Confidence 7777654 32 333333 552 22 124467777777765543 2 2468899886541 01
Q ss_pred CCEEEeccCCccCccCcccHHHHHHHHHhcc
Q 006969 307 ARQVEVTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 307 A~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
.. -+- -.-+|+ |..+.+.++..|+..+
T Consensus 225 ~~-~~~-~~~~G~--G~id~~~~~~~L~~~g 251 (287)
T 2x7v_A 225 AA-KDR-HERIGS--GFIGEEGFAVFFSFKE 251 (287)
T ss_dssp CC-CCC-EECTTS--SSSHHHHHHHHHTCHH
T ss_pred Cc-ccc-cCCCCC--CCcCHHHHHHHHhccC
Confidence 11 010 012444 8899999999998654
No 87
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=92.52 E-value=0.86 Score=44.82 Aligned_cols=163 Identities=20% Similarity=0.163 Sum_probs=110.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcc----ccccCCCc--------cceEEeeccc----
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGN----AVDAESGY--------VPVICGLSRC---- 160 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~----~~~~~~~l--------~~~i~~~~r~---- 160 (623)
.-|.|+-++-.+...+...+.+-+|-.+-.|..|..+-.|+..... ++.+..++ -..+-+|.+.
T Consensus 47 y~tve~av~~mk~y~~~~~~avSVGLGaGDp~Q~~~Va~Ia~~~~P~HVNQvFtgag~t~~~L~~~~T~VNaLvsPTG~~ 126 (249)
T 3m0z_A 47 YPDVASAVVDMRDYAKLIDNALSVGLGAGDPNQSAMVSEISRQVQPQHVNQVFTGVATSRALLGQNETVVNGLVSPTGTP 126 (249)
T ss_dssp SSSHHHHHHHHHHHHHHTTTCEEEECSSSCGGGHHHHHHHHHHHCCSEECCBGGGHHHHHHHHTSSCSEEEEEEBCCSST
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHhcCCCcccccccchHHHHHhccCCCeEEEEEEcCCCcc
Confidence 3478888999999998888889999887788889888888765321 11100000 0112222111
Q ss_pred ------------c----hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 006969 161 ------------N----ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (623)
Q Consensus 161 ------------~----~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~ 224 (623)
. .-.++.|+..+++.|.+.|.+|- .- |. ..++.++.+++.|.++|+ .+-
T Consensus 127 G~VkIsTGp~Ss~~~~~~V~vetAiaml~dmG~~SvKffP-m~--------Gl---~~l~E~~avAka~a~~g~---~lE 191 (249)
T 3m0z_A 127 GMVKISTGPLSSGAADGIVPLETAIALLKDMGGSSIKYFP-MG--------GL---KHRAEFEAVAKACAAHDF---WLE 191 (249)
T ss_dssp TEEECCCSTTGGGSSCCEEEHHHHHHHHHHTTCCEEEECC-CT--------TT---TTHHHHHHHHHHHHHTTC---EEE
T ss_pred ceEEeccCccccCCCCceeeHHHHHHHHHHcCCCeeeEee-cC--------Cc---ccHHHHHHHHHHHHHcCc---eEC
Confidence 0 11468889999999999998762 21 11 124445566677777886 233
Q ss_pred ccCCCCCCHHHHHHHHHHHHHcCCcEEe-------ecCcccccCHHHHHHHHHHHHHhC
Q 006969 225 PEDAGRSDRKFLYEILGEVIKVGATTLN-------IPDTVGITMPTEFGKLIADIKANT 276 (623)
Q Consensus 225 ~eda~r~d~e~l~~~~~~~~~aGa~~I~-------l~DTvG~~~P~~v~~li~~l~~~~ 276 (623)
| .+..|.+-+.++++.+.++|+..|. |=-..|...|+++.+++..+++.+
T Consensus 192 P--TGGIdl~N~~~I~~i~l~aGv~~viPHIYssIIDk~TG~TrpedV~~ll~~~K~l~ 248 (249)
T 3m0z_A 192 P--TGGIDLENYSEILKIALDAGVSKIIPHIYSSIIDKASGNTRPADVRQLLEMTKQLV 248 (249)
T ss_dssp E--BSSCCTTTHHHHHHHHHHHTCSCBCCBCCGGGBCTTTCCBCHHHHHHHHHHHHHHC
T ss_pred C--CCCccHhhHHHHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHHhh
Confidence 4 6678888999999999999986542 224689999999999999998764
No 88
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=92.49 E-value=4.3 Score=41.96 Aligned_cols=164 Identities=18% Similarity=0.265 Sum_probs=82.7
Q ss_pred EEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEec----CCCCh----hHHHHHHHHHHHhccccccCCCccc
Q 006969 81 RVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAASK----EDFEAVRTIAKEVGNAVDAESGYVP 152 (623)
Q Consensus 81 ~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGf----P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~ 152 (623)
=|+-+|. |-..--|..++.+..++.++.+.+.|.|+|.+|. |++.+ +|++.+..+.+.+.... +.
T Consensus 14 GIlNvTP-DSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~----~v-- 86 (314)
T 2vef_A 14 GIINVTP-DSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES----DV-- 86 (314)
T ss_dssp EEEECCC----------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC----CC--
T ss_pred EEEeCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC----Cc--
Confidence 4555554 2222223456889999999999999999999997 54432 34444433333221110 11
Q ss_pred eEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc------
Q 006969 153 VICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE------ 226 (623)
Q Consensus 153 ~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e------ 226 (623)
.|+ .--.+.+-+++|+++ |.+.|+ .+|- +... + ++.+.++++|+. |.....
T Consensus 87 piS-IDT~~~~Va~aAl~a----Ga~iIN---DVsg------~~~d-~-------~m~~v~a~~~~~-vvlmh~~~~g~p 143 (314)
T 2vef_A 87 LIS-IDTWKSQVAEAALAA----GADLVN---DITG------LMGD-E-------KMPHVVAEARAQ-VVIMFNPVMARP 143 (314)
T ss_dssp EEE-EECSCHHHHHHHHHT----TCCEEE---ETTT------TCSC-T-------THHHHHHHHTCE-EEEECCHHHHCT
T ss_pred eEE-EeCCCHHHHHHHHHc----CCCEEE---ECCC------CCCC-h-------HHHHHHHHcCCC-EEEEecCCCCCC
Confidence 122 222355566666665 777664 3432 1111 1 344455677875 444211
Q ss_pred -CCC---------------C---------C-C--HHHHHHHHHHHHHcCC--cEEeecCc-ccc-cCHHHHHHHHHHHHH
Q 006969 227 -DAG---------------R---------S-D--RKFLYEILGEVIKVGA--TTLNIPDT-VGI-TMPTEFGKLIADIKA 274 (623)
Q Consensus 227 -da~---------------r---------~-d--~e~l~~~~~~~~~aGa--~~I~l~DT-vG~-~~P~~v~~li~~l~~ 274 (623)
+.. . . + .+++.+.++.+.++|+ +.|.| |- +|. -++++-.++++.+++
T Consensus 144 ~~~~~~~~~~~~~g~~~~~~~~~~y~d~~v~e~v~~~l~~~i~~a~~~GI~~~~Iil-DPGiGF~kt~~~nl~ll~~l~~ 222 (314)
T 2vef_A 144 QHPSSLIFPHFGFGQAFTEEELADFETLPIEELMEAFFERALARAAEAGIAPENILL-DPGIGFGLTKKENLLLLRDLDK 222 (314)
T ss_dssp TSTTTTTSCCCCC--CCCC--CHHHHHSCHHHHHHHHHHHHHHHHHHHTCCGGGEEE-ECCTTSSCCHHHHHHHHHTHHH
T ss_pred CCcccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHcCCChhhEEE-eCCCCcccchHHHHHHHHHHHH
Confidence 100 0 0 0 2456667778888998 34554 54 343 345566667776665
Q ss_pred h
Q 006969 275 N 275 (623)
Q Consensus 275 ~ 275 (623)
.
T Consensus 223 l 223 (314)
T 2vef_A 223 L 223 (314)
T ss_dssp H
T ss_pred h
Confidence 3
No 89
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=92.48 E-value=4.4 Score=41.58 Aligned_cols=198 Identities=19% Similarity=0.254 Sum_probs=104.1
Q ss_pred eEEEeCCC---cccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEec----CCCC----hhHHHHHHHHHHHhccccccCC
Q 006969 80 VRVFDTTL---RDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDAES 148 (623)
Q Consensus 80 v~I~DtTL---RDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGf----P~~s----~~d~e~v~~i~~~~~~~~~~~~ 148 (623)
+-|+.+|. =||.+ .++.+.-++.++.+.+.|.|+|.+|. |.+. ++|.+.+..+.+.+....
T Consensus 43 MgilNvTPDSFsdgg~----~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~---- 114 (297)
T 1tx2_A 43 MGILNVTPDSFSDGGS----YNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV---- 114 (297)
T ss_dssp EEECCCCCCTTCSSCB----HHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS----
T ss_pred EEEEeCCCCccccCCc----cCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC----
Confidence 45777766 45443 46789999999999999999999995 4322 233433322222221110
Q ss_pred CccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCC
Q 006969 149 GYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA 228 (623)
Q Consensus 149 ~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda 228 (623)
+. | |+.=+ .+.+-+++|+++ |.+.|. .+|-. +.. .++++.+++.|+. |......+
T Consensus 115 ~v-p-iSIDT-~~~~V~~aAl~a----Ga~iIN---dvsg~------~~d--------~~m~~~aa~~g~~-vVlmh~~G 169 (297)
T 1tx2_A 115 KL-P-ISIDT-YKAEVAKQAIEA----GAHIIN---DIWGA------KAE--------PKIAEVAAHYDVP-IILMHNRD 169 (297)
T ss_dssp CS-C-EEEEC-SCHHHHHHHHHH----TCCEEE---ETTTT------SSC--------THHHHHHHHHTCC-EEEECCCS
T ss_pred Cc-e-EEEeC-CCHHHHHHHHHc----CCCEEE---ECCCC------CCC--------HHHHHHHHHhCCc-EEEEeCCC
Confidence 11 2 22222 356667777776 777664 44320 111 1345566777876 44433211
Q ss_pred CC--CC-----HHHHHHHHHHHHHcCCc--EEeecCc-ccc-cCHHHHHHHHHHHHHhC-CCCcceeEEEe---------
Q 006969 229 GR--SD-----RKFLYEILGEVIKVGAT--TLNIPDT-VGI-TMPTEFGKLIADIKANT-PGIENVVISTH--------- 287 (623)
Q Consensus 229 ~r--~d-----~e~l~~~~~~~~~aGa~--~I~l~DT-vG~-~~P~~v~~li~~l~~~~-~~~~~v~i~~H--------- 287 (623)
.. .| .+++.+.++.+.++|.. .|.| |. +|. -+.++-.++++.+++-- .+. .+-+++.
T Consensus 170 ~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~Iil-DPg~Gfgk~~~~n~~ll~~l~~l~~lg~-Pvl~G~Srksfig~~~ 247 (297)
T 1tx2_A 170 NMNYRNLMADMIADLYDSIKIAKDAGVRDENIIL-DPGIGFAKTPEQNLEAMRNLEQLNVLGY-PVLLGTSRKSFIGHVL 247 (297)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCTTSSCCHHHHHHHHHTGGGGGGGCS-CBEEECTTCHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEE-eCCCCcCCCHHHHHHHHHHHHHHHhCCC-CEEEEeccchhhhhhc
Confidence 11 11 37788888888889986 3443 33 222 23444455555554311 121 1334432
Q ss_pred ---ecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 288 ---CQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 288 ---~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
..+-+.-.+|-+..|+..||+.|.+
T Consensus 248 g~~~~~r~~~t~a~~~~a~~~ga~Ivrv 275 (297)
T 1tx2_A 248 DLPVEERLEGTGATVCLGIEKGCEFVRV 275 (297)
T ss_dssp TCCGGGCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHhHHHHHHHHHHHHHCCCcEEEe
Confidence 0112223344556677778888865
No 90
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=92.38 E-value=9.3 Score=38.78 Aligned_cols=159 Identities=17% Similarity=0.221 Sum_probs=86.6
Q ss_pred EEEeCCC---cccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEec----CCCC----hhHHHHHHHHHHHhccccccCCC
Q 006969 81 RVFDTTL---RDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDAESG 149 (623)
Q Consensus 81 ~I~DtTL---RDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGf----P~~s----~~d~e~v~~i~~~~~~~~~~~~~ 149 (623)
-|+-+|. =||. ..++.+.-++.++.+.+.|-|+|.+|. |.+. ++|++.+..+.+.+... +
T Consensus 10 gilN~TpDSFsdgg----~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-----~ 80 (280)
T 1eye_A 10 GVLNVTDDSFSDGG----CYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-----G 80 (280)
T ss_dssp EEEECSCCTTCSSC----CCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-----T
T ss_pred EEEeCCCCCcCCCc----ccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-----C
Confidence 3555544 4554 457899999999999999999999996 4322 23444433333332110 1
Q ss_pred ccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc---
Q 006969 150 YVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--- 226 (623)
Q Consensus 150 l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e--- 226 (623)
. | |+.= -.+.+-+++|+++ |.+.|. .+|-. +.. .++++.++++|+. |...+.
T Consensus 81 ~-p-iSID-T~~~~va~aAl~a----Ga~iIN---dvsg~------~~d--------~~m~~~~a~~~~~-vVlmh~~G~ 135 (280)
T 1eye_A 81 I-T-VSID-TMRADVARAALQN----GAQMVN---DVSGG------RAD--------PAMGPLLAEADVP-WVLMHWRAV 135 (280)
T ss_dssp C-C-EEEE-CSCHHHHHHHHHT----TCCEEE---ETTTT------SSC--------TTHHHHHHHHTCC-EEEECCCCS
T ss_pred C-E-EEEe-CCCHHHHHHHHHc----CCCEEE---ECCCC------CCC--------HHHHHHHHHhCCe-EEEEcCCCC
Confidence 1 1 2222 2355666777765 777664 34320 111 1355666778886 444332
Q ss_pred --CCCC-----CC-----HHHHHHHHHHHHHcCCc--EEeecCc-cccc-CHHHHHHHHHHHHH
Q 006969 227 --DAGR-----SD-----RKFLYEILGEVIKVGAT--TLNIPDT-VGIT-MPTEFGKLIADIKA 274 (623)
Q Consensus 227 --da~r-----~d-----~e~l~~~~~~~~~aGa~--~I~l~DT-vG~~-~P~~v~~li~~l~~ 274 (623)
+... .| .+++.+.++.+.++|.. .|.| |. .|.. +.++-.++++.+.+
T Consensus 136 p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~Iil-DPg~Gf~k~~~~n~~ll~~l~~ 198 (280)
T 1eye_A 136 SADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVL-DPGLGFAKTAQHNWAILHALPE 198 (280)
T ss_dssp CTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCTTSSCCHHHHHHHHHTHHH
T ss_pred CcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhhEEE-ECCCCcccCHHHHHHHHHHHHH
Confidence 1111 12 67888899999999986 4444 32 2322 34555556555543
No 91
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=92.36 E-value=3 Score=42.23 Aligned_cols=164 Identities=19% Similarity=0.241 Sum_probs=94.5
Q ss_pred HHHHHHHHHhHcCCCEEEEec-CCCChhHHHHHHHHHHHhccccccCCCccceEEe-ecccchhhHHHHHHHHhcCCCCE
Q 006969 102 EKLDIARQLAKLGVDIIEAGF-PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-LSRCNERDIKTAWEAVKYAKRPR 179 (623)
Q Consensus 102 ~Kl~Ia~~L~~~Gvd~IEvGf-P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~-~~r~~~~dI~~a~eal~~a~~~~ 179 (623)
+-.++++...+.|.+.|.+-. +....+.++.++.+.+.+. .|.++. |.. ++..++.+.+ +|++.
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~---------lPvl~kdfii-d~~qv~~A~~----~GAD~ 138 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVS---------IPVLRKDFVV-QPYQIHEARA----HGADM 138 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHCS---------SCEEEESCCC-SHHHHHHHHH----TTCSE
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhCC---------CCEEECcccc-CHHHHHHHHH----cCCCE
Confidence 347789999999999999852 2223345667777776532 133321 221 2234555544 59999
Q ss_pred EEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccc
Q 006969 180 IHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGI 259 (623)
Q Consensus 180 v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~ 259 (623)
|++-.+.-+ . +.+.+.+++++++|+. +-+.. ++++.+ +.+.++|++.|.+--....
T Consensus 139 VlLi~a~l~----------~----~~l~~l~~~a~~lGl~-~lvev-----~t~ee~----~~A~~~Gad~IGv~~r~l~ 194 (272)
T 3qja_A 139 LLLIVAALE----------Q----SVLVSMLDRTESLGMT-ALVEV-----HTEQEA----DRALKAGAKVIGVNARDLM 194 (272)
T ss_dssp EEEEGGGSC----------H----HHHHHHHHHHHHTTCE-EEEEE-----SSHHHH----HHHHHHTCSEEEEESBCTT
T ss_pred EEEecccCC----------H----HHHHHHHHHHHHCCCc-EEEEc-----CCHHHH----HHHHHCCCCEEEECCCccc
Confidence 998655322 1 3356778889999985 44433 344544 3445679999888633222
Q ss_pred cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEE
Q 006969 260 TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQV 310 (623)
Q Consensus 260 ~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~V 310 (623)
..+-.+ +.+..+.+.+|. ++++-. -.|.. ..+.....++||+.|
T Consensus 195 ~~~~dl-~~~~~l~~~v~~--~~pvVa----egGI~t~edv~~l~~~Gadgv 239 (272)
T 3qja_A 195 TLDVDR-DCFARIAPGLPS--SVIRIA----ESGVRGTADLLAYAGAGADAV 239 (272)
T ss_dssp TCCBCT-THHHHHGGGSCT--TSEEEE----ESCCCSHHHHHHHHHTTCSEE
T ss_pred ccccCH-HHHHHHHHhCcc--cCEEEE----ECCCCCHHHHHHHHHcCCCEE
Confidence 222112 234455555652 233332 13333 567778888898876
No 92
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=92.07 E-value=1.6 Score=43.91 Aligned_cols=100 Identities=20% Similarity=0.194 Sum_probs=69.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCccccc---CHHHHHHHHHHHHHhCCCCc-ceeEEEeecCCcchHHHHHHHHHHhC
Q 006969 231 SDRKFLYEILGEVIKVGATTLNIPDTVGIT---MPTEFGKLIADIKANTPGIE-NVVISTHCQNDLGLSTANTIAGACAG 306 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~---~P~~v~~li~~l~~~~~~~~-~v~i~~H~HND~GlAvANslaAv~aG 306 (623)
.+.+--..-++.+++.||+.|-+.=-+|.+ .-..+.+-|+.+++..++.. +++|+.-..+|--. ..-+..|.++|
T Consensus 108 ~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei-~~A~~ia~eaG 186 (260)
T 3r12_A 108 NETRTKAHEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEK-IAACVISKLAG 186 (260)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHH-HHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHH-HHHHHHHHHhC
Confidence 455555556677888999999887777775 45667777888877654321 45566655555444 34467889999
Q ss_pred CCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 307 ARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 307 A~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
|+.|-+| -|.+ .|++.+|++-...+
T Consensus 187 ADfVKTS-TGf~--~~GAT~edV~lm~~ 211 (260)
T 3r12_A 187 AHFVKTS-TGFG--TGGATAEDVHLMKW 211 (260)
T ss_dssp CSEEECC-CSSS--SCCCCHHHHHHHHH
T ss_pred cCEEEcC-CCCC--CCCCCHHHHHHHHH
Confidence 9999999 5554 57899988655444
No 93
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=91.94 E-value=3.1 Score=42.75 Aligned_cols=137 Identities=16% Similarity=0.104 Sum_probs=81.5
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEe--cCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHh
Q 006969 96 ATLTSKEKLDIARQLAKLGVDIIEAG--FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVK 173 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~Gvd~IEvG--fP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~ 173 (623)
..++.++..++++.+.+.|++.|-+. -|-..++=.+.++.+.+. +....+...+... .++.-++.++
T Consensus 48 ~~ls~e~i~~~i~~~~~~g~~~i~~tGGEPll~~~l~~li~~~~~~---------~~~~~i~i~TNG~--ll~~~~~~L~ 116 (340)
T 1tv8_A 48 ELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQI---------DGIEDIGLTTNGL--LLKKHGQKLY 116 (340)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEESSCGGGSTTHHHHHHHHTTC---------TTCCEEEEEECST--THHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEeCCCccchhhHHHHHHHHHhC---------CCCCeEEEEeCcc--chHHHHHHHH
Confidence 45899999999999999999988773 354444222344433321 1111232223222 2233445566
Q ss_pred cCCCCEEEEEecCC-H-HHHHHHhCC-CHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCC-CCHHHHHHHHHHHHHcCCc
Q 006969 174 YAKRPRIHTFIATS-G-IHMEHKLRK-TKQQVVEIARSMVKFARSLGCDDVEFSPEDAGR-SDRKFLYEILGEVIKVGAT 249 (623)
Q Consensus 174 ~a~~~~v~i~~~~S-d-~h~~~~l~~-t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r-~d~e~l~~~~~~~~~aGa~ 249 (623)
.+|.++|.+.+-+. + .|....-+. + ++.+.+.++.+++.|+ .|.+... ..+ .+.+.+.++++.+.+.|++
T Consensus 117 ~~g~~~v~iSld~~~~~~~~~i~~~~~~----~~~v~~~i~~l~~~g~-~v~i~~v-v~~g~n~~ei~~~~~~~~~~g~~ 190 (340)
T 1tv8_A 117 DAGLRRINVSLDAIDDTLFQSINNRNIK----ATTILEQIDYATSIGL-NVKVNVV-IQKGINDDQIIPMLEYFKDKHIE 190 (340)
T ss_dssp HHTCCEEEEECCCSSHHHHHHHHSSCCC----HHHHHHHHHHHHHTTC-EEEEEEE-ECTTTTGGGHHHHHHHHHHTTCC
T ss_pred HCCCCEEEEecCCCCHHHHHHhhCCCCC----HHHHHHHHHHHHHCCC-CEEEEEE-EeCCCCHHHHHHHHHHHHhcCCe
Confidence 67899999877654 3 333222122 4 4556677888888998 4554332 122 2456788889999999987
No 94
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=91.91 E-value=3.3 Score=41.94 Aligned_cols=163 Identities=12% Similarity=0.167 Sum_probs=81.0
Q ss_pred eEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEec----CCCCh----hHHHHHHHHHHHhccccccCCCcc
Q 006969 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAASK----EDFEAVRTIAKEVGNAVDAESGYV 151 (623)
Q Consensus 80 v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGf----P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~ 151 (623)
+=|+-+|+ |-..--|..++.+.-++-++.+.+.|.|+|++|- |++.+ +|++.+.-+.+.+... +
T Consensus 10 MGIlNvTP-DSFsDGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~-----~-- 81 (270)
T 4hb7_A 10 MGILNVTP-DSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGF-----D-- 81 (270)
T ss_dssp EEEEECC-----------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTS-----S--
T ss_pred EEEEeCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcC-----C--
Confidence 34555554 2222223456889999999999999999999994 54432 3455554444443221 1
Q ss_pred ceEEeecccchhhHHHHHHHHhcCCCCEEEEEe-cCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCC-C
Q 006969 152 PVICGLSRCNERDIKTAWEAVKYAKRPRIHTFI-ATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA-G 229 (623)
Q Consensus 152 ~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~-~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda-~ 229 (623)
..|+.=+ .+.+=++.|+++ |++.|+=.. ...| + ++.+.+.++|+. ++...... .
T Consensus 82 v~iSIDT-~~~~Va~~al~a----Ga~iINDVs~g~~d-----------~-------~m~~~va~~~~~-~vlMH~~~~p 137 (270)
T 4hb7_A 82 VKISVDT-FRSEVAEACLKL----GVDMINDQWAGLYD-----------H-------RMFQIVAKYDAE-IILMHNGNGN 137 (270)
T ss_dssp SEEEEEC-SCHHHHHHHHHH----TCCEEEETTTTSSC-----------T-------HHHHHHHHTTCE-EEEECCCSSC
T ss_pred CeEEEEC-CCHHHHHHHHHh----ccceeccccccccc-----------h-------hHHHHHHHcCCC-eEEeccccCC
Confidence 1222222 244555666665 777765321 1111 1 234455566664 33322111 1
Q ss_pred CCC------HHHHHHHHHHHHHcCCc--EEeecCccccc-CHHHHHHHHHHHHH
Q 006969 230 RSD------RKFLYEILGEVIKVGAT--TLNIPDTVGIT-MPTEFGKLIADIKA 274 (623)
Q Consensus 230 r~d------~e~l~~~~~~~~~aGa~--~I~l~DTvG~~-~P~~v~~li~~l~~ 274 (623)
+.+ .+|+.+-++.+.++|+. .|.|==-.|.. ++++=.++++.+.+
T Consensus 138 ~~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGFgKt~~~N~~ll~~l~~ 191 (270)
T 4hb7_A 138 RDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDE 191 (270)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHTCHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHcCCCCceEEEeCCCCcccccccHHHHHhhHHH
Confidence 221 24555566677777763 34442234443 45555556555543
No 95
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=91.86 E-value=8 Score=39.45 Aligned_cols=194 Identities=13% Similarity=0.149 Sum_probs=117.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.||+-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+
T Consensus 21 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la- 92 (300)
T 3eb2_A 21 RVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQ-------RRVPVVAGVASTSVADAVAQA- 92 (300)
T ss_dssp CBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHT-------TSSCBEEEEEESSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCCCHHHHHHHH-
Confidence 478888899999999999998854 3 355566664 55555555543 3357888877655444 4433
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~aG 247 (623)
+....+|++.+-+..|-. ++.|.+++++-..+..+. .++..+-|+ |. .+...+++.+.++ .+ -
T Consensus 93 ~~a~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~L----a~-~ 157 (300)
T 3eb2_A 93 KLYEKLGADGILAILEAY-------FPLKDAQIESYFRAIADA---VEIPVVIYTNPQFQRSDLTLDVIARL----AE-H 157 (300)
T ss_dssp HHHHHHTCSEEEEEECCS-------SCCCHHHHHHHHHHHHHH---CSSCEEEEECTTTCSSCCCHHHHHHH----HT-S
T ss_pred HHHHHcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHH---CCCCEEEEECccccCCCCCHHHHHHH----Hc-C
Confidence 233456999887766642 245777766655444433 345545564 42 2234566665554 33 3
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|- ..++.++++.....+ . -+-+.+++ .+.++.+|++.+ +.| .+|...+
T Consensus 158 pnIvgiKdssgd--~~~~~~~~~~~~~~f------~-v~~G~d~~------~~~~l~~G~~G~---is~----~an~~P~ 215 (300)
T 3eb2_A 158 PRIRYIKDASTN--TGRLLSIINRCGDAL------Q-VFSASAHI------PAAVMLIGGVGW---MAG----PACIAPR 215 (300)
T ss_dssp TTEEEEEECSSB--HHHHHHHHHHHGGGS------E-EEECTTSC------HHHHHHTTCCEE---EEG----GGGTCHH
T ss_pred CCEEEEEcCCCC--HHHHHHHHHHcCCCe------E-EEeCcHHH------HHHHHhCCCCEE---EeC----hhhhhHH
Confidence 589999999884 456666666554333 1 23344432 356778898653 333 4577666
Q ss_pred HHHHHHHh
Q 006969 328 EVVMAFKC 335 (623)
Q Consensus 328 evv~~L~~ 335 (623)
.++...+.
T Consensus 216 ~~~~l~~a 223 (300)
T 3eb2_A 216 QSVALYEL 223 (300)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655543
No 96
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=91.83 E-value=6.7 Score=40.39 Aligned_cols=195 Identities=11% Similarity=0.127 Sum_probs=118.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.||+-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+
T Consensus 39 ~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-------grvpViaGvg~~st~~ai~la- 110 (315)
T 3si9_A 39 AIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVA-------KRVPVVAGAGSNSTSEAVELA- 110 (315)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCSSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCCCHHHHHHHH-
Confidence 478889999999999999999876 3 455566665 55555555543 3357888887655444 4444
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc--CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e--da~r~d~e~l~~~~~~~~~aG 247 (623)
+....+|++.+-+..|-. .+.+.+++++-..+..+. .++..+-|+.- .+...+++.+.++++. .
T Consensus 111 ~~A~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La~~---~- 176 (315)
T 3si9_A 111 KHAEKAGADAVLVVTPYY-------NRPNQRGLYTHFSSIAKA---ISIPIIIYNIPSRSVIDMAVETMRDLCRD---F- 176 (315)
T ss_dssp HHHHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---CSSCEEEEECHHHHSCCCCHHHHHHHHHH---C-
T ss_pred HHHHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHc---CCCCEEEEeCchhhCCCCCHHHHHHHHhh---C-
Confidence 334557999887765532 245666666555544433 35554555432 2445667766655431 3
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|- ..++.++++... ++ ..+ +-..++ ..+.++..|++.+ +.| .+|...+
T Consensus 177 pnIvgiKdssgd--~~~~~~l~~~~~---~~---f~v-~~G~d~------~~l~~l~~G~~G~---is~----~an~~P~ 234 (315)
T 3si9_A 177 KNIIGVKDATGK--IERASEQREKCG---KD---FVQ-LSGDDC------TALGFNAHGGVGC---ISV----SSNVAPK 234 (315)
T ss_dssp TTEEEEEECSCC--THHHHHHHHHHC---SS---SEE-EESCGG------GHHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEeCCCC--HHHHHHHHHHcC---CC---eEE-EecCHH------HHHHHHHcCCCEE---Eec----HHHhhHH
Confidence 489999999885 355666655442 21 222 334333 2466788898754 333 4677777
Q ss_pred HHHHHHHh
Q 006969 328 EVVMAFKC 335 (623)
Q Consensus 328 evv~~L~~ 335 (623)
.++...+.
T Consensus 235 ~~~~l~~a 242 (315)
T 3si9_A 235 LCAQLHAA 242 (315)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655543
No 97
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=91.80 E-value=2.8 Score=42.05 Aligned_cols=197 Identities=12% Similarity=0.092 Sum_probs=96.6
Q ss_pred HHHHHHhHcCCCEEEEe--cCC------CChhHHHHHHHHHHHhccccccCCCccceEEeec-------ccc-h------
Q 006969 105 DIARQLAKLGVDIIEAG--FPA------ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS-------RCN-E------ 162 (623)
Q Consensus 105 ~Ia~~L~~~Gvd~IEvG--fP~------~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~-------r~~-~------ 162 (623)
+.++.+.++|++.||+. .|. .++.+.+.++.+.+.. ++. .+++++ ... +
T Consensus 22 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------gl~-~~~~h~~~~~nl~s~d~~~~r~~~ 92 (303)
T 3aal_A 22 AASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAH--------GIE-EIVVHAPYIINIGNTTNLDTFSLG 92 (303)
T ss_dssp HHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHT--------TCC-EEEEECCTTCCTTCSSCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHc--------CCc-eEEEeccccccCCCCCcHHHHHHH
Confidence 44555677899999992 221 1134556666655542 221 122211 111 1
Q ss_pred -hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH--cCCCeEEEcccCCC----CCCHHH
Q 006969 163 -RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS--LGCDDVEFSPEDAG----RSDRKF 235 (623)
Q Consensus 163 -~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~--~G~~~V~f~~eda~----r~d~e~ 235 (623)
+.++.+++.....|.+.|.+..... .+.+.++.++.+.+.++.+.+ .|+. +.+-+.... -.+++.
T Consensus 93 ~~~~~~~i~~A~~lGa~~vv~h~g~~-------~~~~~~~~~~~~~~~l~~l~~~a~gv~-l~lEn~~~~~~~~~~t~~~ 164 (303)
T 3aal_A 93 VDFLRAEIERTEAIGAKQLVLHPGAH-------VGAGVEAGLRQIIRGLNEVLTREQNVQ-IALETMAGKGSECGRTFEE 164 (303)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCEEC-------TTSCHHHHHHHHHHHHHHHCCSSCSCE-EEEECCCCCTTEECSSHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcC-------CCCCHHHHHHHHHHHHHHHHHhCCCCE-EEEecCCCCCCccCCCHHH
Confidence 1223344444445777776543221 123566677776666665533 3432 333221111 126777
Q ss_pred HHHHHHHHHHcCC-cEEeec-Ccc-----cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCC
Q 006969 236 LYEILGEVIKVGA-TTLNIP-DTV-----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 308 (623)
Q Consensus 236 l~~~~~~~~~aGa-~~I~l~-DTv-----G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~ 308 (623)
+.++++.+ +- +.+.+| ||. |.-....+.++++.+.+.++. +-...+|.||..+- .|..
T Consensus 165 ~~~li~~v---~~~~~vg~~lD~~H~~~~g~d~~~~~~~~l~~~~~~~g~--~~i~~vHl~D~~~~----------~~~~ 229 (303)
T 3aal_A 165 LAYIIDGV---AYNDKLSVCFDTCHTHDAGYDIVNDFDGVLEEFDRIIGL--GRLKVLHINDSKNP----------RGSR 229 (303)
T ss_dssp HHHHHHHC---TTGGGEEEEEEHHHHHHHTCCHHHHHHHHHHHHHHHTCG--GGEEEEEECEESSC----------TTCC
T ss_pred HHHHHHhc---CCCCCEEEEEEccCHhhhCCChhhhHHHHHHHHHHhcCc--ccEEEEEeeCCCCc----------CCCC
Confidence 77766654 32 333333 653 321122455666666444431 12467888876541 0111
Q ss_pred EEEeccCCccCccCcccHHHHHHHHHhcc
Q 006969 309 QVEVTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 309 ~Vd~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
.| .-..+|+ |+.+.+.++..|+..+
T Consensus 230 -~d-~h~~~G~--G~id~~~~~~~L~~~g 254 (303)
T 3aal_A 230 -KD-RHENIGF--GHIGFAALNYIVHHPQ 254 (303)
T ss_dssp -CC-CEECTTS--SSSCHHHHHHHHTCTT
T ss_pred -Cc-CCCCCCC--CCCCHHHHHHHHhCcC
Confidence 00 0012444 8899999999998755
No 98
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=91.72 E-value=2.3 Score=43.38 Aligned_cols=138 Identities=10% Similarity=0.076 Sum_probs=80.4
Q ss_pred cchhhHHHHHHHHhcCCCC---EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-eEEEcccCCCCCCHH
Q 006969 160 CNERDIKTAWEAVKYAKRP---RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDAGRSDRK 234 (623)
Q Consensus 160 ~~~~dI~~a~eal~~a~~~---~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~-~V~f~~eda~r~d~e 234 (623)
...++...+.+.+..+|++ .|.+-++.........++.+.+.. .+.++.+|+. ++. .|-.++. .+.+
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~----~~ii~~vr~~~~~Pv~vK~~~~----~~~~ 174 (314)
T 2e6f_A 103 LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAM----RTYLQQVSLAYGLPFGVKMPPY----FDIA 174 (314)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHH----HHHHHHHHHHHCSCEEEEECCC----CCHH
T ss_pred CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHH----HHHHHHHHHhcCCCEEEEECCC----CCHH
Confidence 4567777777766666777 677654321111112234455543 3334443332 443 1233442 3677
Q ss_pred HHHHHHHHHHHcC-CcEEeecCccc----------------------ccCH---HHHHHHHHHHHHhCCCCcceeEEEee
Q 006969 235 FLYEILGEVIKVG-ATTLNIPDTVG----------------------ITMP---TEFGKLIADIKANTPGIENVVISTHC 288 (623)
Q Consensus 235 ~l~~~~~~~~~aG-a~~I~l~DTvG----------------------~~~P---~~v~~li~~l~~~~~~~~~v~i~~H~ 288 (623)
.+.++++.+.++| ++.|.+.+|.| +.-| ....++++.+++.+++ +||..=.
T Consensus 175 ~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~---ipvi~~G 251 (314)
T 2e6f_A 175 HFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPD---KLVFGCG 251 (314)
T ss_dssp HHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTT---SEEEEES
T ss_pred HHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCC---CCEEEEC
Confidence 8889999999999 99999888763 1111 1224788888888743 5554332
Q ss_pred cCCcchH-HHHHHHHHHhCCCEEEe
Q 006969 289 QNDLGLS-TANTIAGACAGARQVEV 312 (623)
Q Consensus 289 HND~GlA-vANslaAv~aGA~~Vd~ 312 (623)
|.- -..+..++.+||+.|..
T Consensus 252 ----GI~~~~da~~~l~~GAd~V~i 272 (314)
T 2e6f_A 252 ----GVYSGEDAFLHILAGASMVQV 272 (314)
T ss_dssp ----SCCSHHHHHHHHHHTCSSEEE
T ss_pred ----CCCCHHHHHHHHHcCCCEEEE
Confidence 322 34667777889987743
No 99
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=91.70 E-value=0.33 Score=48.32 Aligned_cols=213 Identities=15% Similarity=0.111 Sum_probs=101.9
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCC-Ch--hHHHHHHHHHHHhccccccCCCcc-ceEEeeccc-c-------hhhH
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAA-SK--EDFEAVRTIAKEVGNAVDAESGYV-PVICGLSRC-N-------ERDI 165 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~-s~--~d~e~v~~i~~~~~~~~~~~~~l~-~~i~~~~r~-~-------~~dI 165 (623)
++.++. ++.+.++|++.||+-.+.. .. .+.+.++.+.+.+... |+. ..+..+... . .+.+
T Consensus 15 ~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~-----gl~~~~~~~~~~~~~~~~~~~~~~~~ 86 (286)
T 3dx5_A 15 ISFTDI---VQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDK-----TLEITMISDYLDISLSADFEKTIEKC 86 (286)
T ss_dssp CCHHHH---HHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGG-----TCCEEEEECCCCCSTTSCHHHHHHHH
T ss_pred CCHHHH---HHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHc-----CCeEEEEecCCCCCCchhHHHHHHHH
Confidence 566665 4555678999999943310 00 0112334444433221 332 122222110 0 1234
Q ss_pred HHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc-CCCCCCHHHHHHHHHHHH
Q 006969 166 KTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-DAGRSDRKFLYEILGEVI 244 (623)
Q Consensus 166 ~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e-da~r~d~e~l~~~~~~~~ 244 (623)
+++++.....|.+.|.++........ ......+...+.+.++.++|++.|+. +.+-+. ...-.+++.+.++++.+
T Consensus 87 ~~~i~~A~~lG~~~v~~~~g~~~~~~--~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~~~~~~~~~~~~~l~~~~- 162 (286)
T 3dx5_A 87 EQLAILANWFKTNKIRTFAGQKGSAD--FSQQERQEYVNRIRMICELFAQHNMY-VLLETHPNTLTDTLPSTLELLGEV- 162 (286)
T ss_dssp HHHHHHHHHHTCCEEEECSCSSCGGG--SCHHHHHHHHHHHHHHHHHHHHTTCE-EEEECCTTSTTSSHHHHHHHHHHH-
T ss_pred HHHHHHHHHhCCCEEEEcCCCCCccc--CcHHHHHHHHHHHHHHHHHHHHhCCE-EEEecCCCcCcCCHHHHHHHHHhc-
Confidence 45566555668888877543321000 00001345567777888889999974 555332 22234667777777654
Q ss_pred HcCCcEEeec-CcccccCH-HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH---HHH-HhCCCEEEeccCCcc
Q 006969 245 KVGATTLNIP-DTVGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI---AGA-CAGARQVEVTINGIG 318 (623)
Q Consensus 245 ~aGa~~I~l~-DTvG~~~P-~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl---aAv-~aGA~~Vd~Tv~GlG 318 (623)
+...+.++ ||.=.... ....+.++.+..+ ...+|.+|..+-.....+ ..+ ..|...- -.-+|
T Consensus 163 --~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~-------i~~vHl~D~~~~~~~~~~~~~~~~~~~g~~~~---~~~~G 230 (286)
T 3dx5_A 163 --DHPNLKINLDFLHIWESGADPVDSFQQLRPW-------IQHYHFKNISSADYLHVFEPNNVYAAAGNRTG---MVPLF 230 (286)
T ss_dssp --CCTTEEEEEEHHHHHHTTCCHHHHHHHHGGG-------EEEEEECEESCGGGGGGGSHHHHHSTTCCCTT---EECGG
T ss_pred --CCCCeEEEeccccHhhcCCCHHHHHHHHHhH-------heEEEecCCcccccccccCccccccccCccee---eeccC
Confidence 33333332 54322111 1223344444332 358899987763210000 000 0121110 12234
Q ss_pred CccCcccHHHHHHHHHhc
Q 006969 319 ERAGNASLEEVVMAFKCR 336 (623)
Q Consensus 319 ERaGNa~lEevv~~L~~~ 336 (623)
.|+.+...++..|+..
T Consensus 231 --~G~id~~~i~~~L~~~ 246 (286)
T 3dx5_A 231 --EGIVNYDEIIQEVRDT 246 (286)
T ss_dssp --GSSSCHHHHHHHHTTS
T ss_pred --CCcCCHHHHHHHHHhc
Confidence 4889999999999874
No 100
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=91.63 E-value=0.82 Score=47.05 Aligned_cols=106 Identities=17% Similarity=0.147 Sum_probs=85.2
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 298 (623)
.|-+ .+..|.+-+.++++.+++.|++.|.++-|+|= ++.+|-.++++.+.+...+ ++++-+|+ +|+.--++..
T Consensus 25 TPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~l 102 (304)
T 3l21_A 25 TPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGD--RARVIAGAGTYDTAHSIRL 102 (304)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSCHHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEeCCCCCHHHHHHH
Confidence 5543 45789999999999999999999999999995 5889999999999988765 46777777 7999999999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+..|-++||+.+=..---+-. .+-++++..++.
T Consensus 103 a~~a~~~Gadavlv~~P~y~~----~s~~~l~~~f~~ 135 (304)
T 3l21_A 103 AKACAAEGAHGLLVVTPYYSK----PPQRGLQAHFTA 135 (304)
T ss_dssp HHHHHHHTCSEEEEECCCSSC----CCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCCCCC----CCHHHHHHHHHH
Confidence 999999999998775443322 255666666654
No 101
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=91.54 E-value=10 Score=38.43 Aligned_cols=195 Identities=13% Similarity=0.095 Sum_probs=116.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEe-----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAG-----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvG-----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+. ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+-
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la~ 91 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVD-------KRVPVIAGTGTNDTEKSIQASI 91 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCcccHHHHHHHHH
Confidence 4677888899999999999998763 455566665 55555555542 3357888877544444 44432
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc--CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e--da~r~d~e~l~~~~~~~~~aG 247 (623)
....+|++.+-+..|-. ++.|.+++++-.++..+.. ++..+-|+.- .+...+++.+.+++ + -
T Consensus 92 -~a~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~ia~a~---~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 155 (292)
T 3daq_A 92 -QAKALGADAIMLITPYY-------NKTNQRGLVKHFEAIADAV---KLPVVLYNVPSRTNMTIEPETVEILS----Q-H 155 (292)
T ss_dssp -HHHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHHH---CSCEEEEECHHHHSCCCCHHHHHHHH----T-S
T ss_pred -HHHHcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHhC---CCCEEEEecccccCCCCCHHHHHHHh----c-C
Confidence 23445899887766532 2457777666555554443 4554555432 24456777766654 3 3
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|- ..++.+ +++..++.+ +.+-+=+| ...+.++..|++.+ +.| .+|...+
T Consensus 156 pnivgiK~ssgd--~~~~~~----~~~~~~~~~---f~v~~G~d-----~~~~~~l~~G~~G~---is~----~~n~~P~ 214 (292)
T 3daq_A 156 PYIVALKDATND--FEYLEE----VKKRIDTNS---FALYSGND-----DNVVEYYQRGGQGV---ISV----IANVIPK 214 (292)
T ss_dssp TTEEEEEECCCC--HHHHHH----HHTTSCTTT---SEEEESCG-----GGHHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEeCCCC--HHHHHH----HHHHCCCCC---EEEEECCH-----HHHHHHHhcCCCEE---EeC----HHHhhHH
Confidence 579999999984 344444 344444211 22223233 22566788998654 333 4577777
Q ss_pred HHHHHHHh
Q 006969 328 EVVMAFKC 335 (623)
Q Consensus 328 evv~~L~~ 335 (623)
.++...+.
T Consensus 215 ~~~~l~~a 222 (292)
T 3daq_A 215 EFQALYDA 222 (292)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655553
No 102
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=91.42 E-value=6.1 Score=40.71 Aligned_cols=194 Identities=16% Similarity=0.132 Sum_probs=116.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEe-----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAG-----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvG-----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+. ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+
T Consensus 41 ~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-------grvpViaGvg~~~t~~ai~la- 112 (315)
T 3na8_A 41 GLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVA-------HRVPTIVSVSDLTTAKTVRRA- 112 (315)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCSSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHH-
Confidence 4788999999999999999988763 455566665 55555555543 2357888877555444 4444
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~aG 247 (623)
+....+|++.+-+..|-. ++.+.+++++-..+..+. .++..+-|+ |. .+...+++.+.+++ .+.
T Consensus 113 ~~A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~L~---a~~- 178 (315)
T 3na8_A 113 QFAESLGAEAVMVLPISY-------WKLNEAEVFQHYRAVGEA---IGVPVMLYNNPGTSGIDMSVELILRIV---REV- 178 (315)
T ss_dssp HHHHHTTCSEEEECCCCS-------SCCCHHHHHHHHHHHHHH---CSSCEEEEECHHHHSCCCCHHHHHHHH---HHS-
T ss_pred HHHHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHh---CCCcEEEEeCcchhCcCCCHHHHHHHH---hcC-
Confidence 334567999887765532 245777766655544433 355545554 32 24455677666553 233
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|- ..++.++++. .++ +..+ +-..++ ..+.++.+|++.+ +.| .+|.-.+
T Consensus 179 pnIvgiKdssgd--~~~~~~~~~~----~~~--~f~v-~~G~D~------~~l~~l~~G~~G~---is~----~an~~P~ 236 (315)
T 3na8_A 179 DNVTMVKESTGD--IQRMHKLRLL----GEG--RVPF-YNGCNP------LALEAFVAGAKGW---CSA----APNLIPT 236 (315)
T ss_dssp TTEEEEEECSSC--HHHHHHHHHH----TTT--CSCE-EECCGG------GHHHHHHHTCSEE---EES----GGGTCHH
T ss_pred CCEEEEECCCCC--HHHHHHHHHH----cCC--CEEE-EeCchH------HHHHHHHCCCCEE---Eec----hhhhCHH
Confidence 478999999884 3555555543 332 1112 223332 2467788898754 333 4567666
Q ss_pred HHHHHHH
Q 006969 328 EVVMAFK 334 (623)
Q Consensus 328 evv~~L~ 334 (623)
.++...+
T Consensus 237 ~~~~l~~ 243 (315)
T 3na8_A 237 LNGQLYQ 243 (315)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655554
No 103
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=91.28 E-value=8.2 Score=39.34 Aligned_cols=179 Identities=19% Similarity=0.203 Sum_probs=112.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCC----hhH-HHHHHHHHHHhccccccCCCccceEEeeccc-chhhHHHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAAS----KED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWE 170 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s----~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~e 170 (623)
..+.+.-..+++.-.+++-+.|=-.+|... ... ...++.+++.. -+|...=+=-+ ..+.+..+++
T Consensus 25 v~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~---------~VPValHlDHg~~~e~i~~ai~ 95 (286)
T 1gvf_A 25 IHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTY---------NMPLALHLDHHESLDDIRRKVH 95 (286)
T ss_dssp CCSHHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHT---------TSCBEEEEEEECCHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhC---------CCcEEEEcCCCCCHHHHHHHHH
Confidence 457889999999999999987644455321 111 24444455432 13443333222 3456666666
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------cccC--------CCCCCHHHH
Q 006969 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPED--------AGRSDRKFL 236 (623)
Q Consensus 171 al~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~~ed--------a~r~d~e~l 236 (623)
+ |...|-+ .. | ..+.|||++..++.+++|+..|+. |+- +-|| ...|+|+..
T Consensus 96 ~----GFtSVMi-Dg-S--------~lp~eeNi~~Tk~vv~~ah~~gvs-VEaElG~vgg~ed~~~~~~~~~~~T~Peea 160 (286)
T 1gvf_A 96 A----GVRSAMI-DG-S--------HFPFAENVKLVKSVVDFCHSQDCS-VEAELGRLGGVEDDMSVDAESAFLTDPQEA 160 (286)
T ss_dssp T----TCCEEEE-CC-T--------TSCHHHHHHHHHHHHHHHHHTTCE-EEEEESCCC-----------CCSSCCHHHH
T ss_pred c----CCCeEEE-CC-C--------CCCHHHHHHHHHHHHHHHHHcCCE-EEEEEeeccCcccCcccccccccCCCHHHH
Confidence 4 8877643 32 2 246799999999999999999974 542 1232 235999988
Q ss_pred HHHHHHHHHcCCcEEeecCccccc------CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 237 YEILGEVIKVGATTLNIPDTVGIT------MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~DTvG~~------~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
.+++++ -|+|.+-++ +|.. .|.-=.++++.+++.++ +||-+|. -.|.....-..|+..|+.-|
T Consensus 161 ~~Fv~~---TgvD~LAva--iGt~HG~Y~~~p~Ld~~~L~~I~~~~~----vpLVlHG--gSG~~~e~i~~ai~~Gv~Ki 229 (286)
T 1gvf_A 161 KRFVEL---TGVDSLAVA--IGTAHGLYSKTPKIDFQRLAEIREVVD----VPLVLHG--ASDVPDEFVRRTIELGVTKV 229 (286)
T ss_dssp HHHHHH---HCCSEEEEC--SSCCSSCCSSCCCCCHHHHHHHHHHCC----SCEEECC--CTTCCHHHHHHHHHTTEEEE
T ss_pred HHHHHH---HCCCEEEee--cCccccCcCCCCccCHHHHHHHHHhcC----CCEEEEC--CCCCCHHHHHHHHHCCCeEE
Confidence 888774 588865543 3322 34333467788888874 6788776 44666667777777777665
No 104
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=91.20 E-value=14 Score=37.60 Aligned_cols=193 Identities=14% Similarity=0.162 Sum_probs=116.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+....++ |+.+-
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-------grvpViaGvg~~~t~~ai~la~ 101 (301)
T 1xky_A 29 NIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVD-------KRVPVIAGTGSNNTHASIDLTK 101 (301)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCceEEeCCCCCCHHHHHHHHH
Confidence 478888899999999999999877 3 455666665 55555555542 2357888887655444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~aG 247 (623)
....+|++.+-+..|-. .+.|.+++++-..+..+ ..++..+-|+ |. .+...+++.+.+++ + -
T Consensus 102 -~A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~---a~~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 165 (301)
T 1xky_A 102 -KATEVGVDAVMLVAPYY-------NKPSQEGMYQHFKAIAE---STPLPVMLYNVPGRSIVQISVDTVVRLS----E-I 165 (301)
T ss_dssp -HHHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHH---TCSSCEEEEECHHHHSSCCCHHHHHHHH----T-S
T ss_pred -HHHhcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCCCCCHHHHHHHH----c-C
Confidence 33557999887766632 24476766665554433 3345545554 32 23346777776664 3 2
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|- ..++.++++ ..++ +..+ +-+.++ ..+.++..|++.+ +.| .+|...+
T Consensus 166 pnIvgiKdssgd--~~~~~~~~~----~~~~--~f~v-~~G~d~------~~l~~l~~G~~G~---is~----~an~~P~ 223 (301)
T 1xky_A 166 ENIVAIKDAGGD--VLTMTEIIE----KTAD--DFAV-YSGDDG------LTLPAMAVGAKGI---VSV----ASHVIGN 223 (301)
T ss_dssp TTEEEEEECSSC--HHHHHHHHH----HSCT--TCEE-EESSGG------GHHHHHHTTCCEE---EES----THHHHHH
T ss_pred CCEEEEEcCCCC--HHHHHHHHH----hcCC--CeEE-EECcHH------HHHHHHHcCCCEE---EcC----HHHhCHH
Confidence 579999999984 344444443 3442 2222 334443 2556788898654 333 4567666
Q ss_pred HHHHHHH
Q 006969 328 EVVMAFK 334 (623)
Q Consensus 328 evv~~L~ 334 (623)
.++...+
T Consensus 224 ~~~~l~~ 230 (301)
T 1xky_A 224 EMQEMIA 230 (301)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655444
No 105
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=91.15 E-value=14 Score=37.50 Aligned_cols=194 Identities=12% Similarity=0.177 Sum_probs=119.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCC-ccceEEeecccchhh-HHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESG-YVPVICGLSRCNERD-IKTA 168 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~-l~~~i~~~~r~~~~d-I~~a 168 (623)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... + .+|.|.+.+..+.++ |+.+
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-------g~rvpviaGvg~~~t~~ai~la 96 (301)
T 3m5v_A 24 KVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCK-------GTKVKVLAGAGSNATHEAVGLA 96 (301)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEEECCCSSHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCCeEEEeCCCCCHHHHHHHH
Confidence 478888899999999999999877 3 355556664 45555555543 3 357888877644444 4444
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHc
Q 006969 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKV 246 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~a 246 (623)
+....+|++.+-+..|-. .+.|.++.++-..+..+.. ++..+-|+ |. .+...+++.+.+++ +.
T Consensus 97 -~~a~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La----~~ 161 (301)
T 3m5v_A 97 -KFAKEHGADGILSVAPYY-------NKPTQQGLYEHYKAIAQSV---DIPVLLYNVPGRTGCEISTDTIIKLF----RD 161 (301)
T ss_dssp -HHHHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHHC---SSCEEEEECHHHHSCCCCHHHHHHHH----HH
T ss_pred -HHHHHcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHhC---CCCEEEEeCchhhCcCCCHHHHHHHH----hc
Confidence 334557999887766542 2456677666555444433 55545554 32 24456777776665 34
Q ss_pred CCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccH
Q 006969 247 GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASL 326 (623)
Q Consensus 247 Ga~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~l 326 (623)
-...+.+.||.|- ..++.++++.. ++ ..+ +-.++++ .+.++..|++.+ +.| .+|.-.
T Consensus 162 ~pnivgiKdssgd--~~~~~~~~~~~----~~---f~v-~~G~d~~------~~~~l~~G~~G~---is~----~~n~~P 218 (301)
T 3m5v_A 162 CENIYGVKEASGN--IDKCVDLLAHE----PR---MML-ISGEDAI------NYPILSNGGKGV---ISV----TSNLLP 218 (301)
T ss_dssp CTTEEEEEECSSC--HHHHHHHHHHC----TT---SEE-EECCGGG------HHHHHHTTCCEE---EES----GGGTCH
T ss_pred CCCEEEEEeCCCC--HHHHHHHHHhC----CC---eEE-EEccHHH------HHHHHHcCCCEE---Eeh----HHHhhH
Confidence 3578999999873 45555555443 33 222 3444432 456788898653 333 467777
Q ss_pred HHHHHHHHh
Q 006969 327 EEVVMAFKC 335 (623)
Q Consensus 327 Eevv~~L~~ 335 (623)
+.++...+.
T Consensus 219 ~~~~~l~~a 227 (301)
T 3m5v_A 219 DMISALTHF 227 (301)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 766655553
No 106
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=91.15 E-value=0.45 Score=50.07 Aligned_cols=112 Identities=18% Similarity=0.166 Sum_probs=72.9
Q ss_pred ceEEeeccc-chhhHHHHHHHHhcCCCCEEEEE---ecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCeEEEccc
Q 006969 152 PVICGLSRC-NERDIKTAWEAVKYAKRPRIHTF---IATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVEFSPE 226 (623)
Q Consensus 152 ~~i~~~~r~-~~~dI~~a~eal~~a~~~~v~i~---~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~~V~f~~e 226 (623)
|.+.--+.. ..+++..|++.+...|.+.|++. +++.+..-...++. .++...|+. |+. |.+.+
T Consensus 215 PVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl----------~ai~~lk~~~~lp-Vi~ds- 282 (350)
T 1vr6_A 215 PVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDI----------SAVPIIRKESHLP-ILVDP- 282 (350)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCT----------THHHHHHHHBSSC-EEECH-
T ss_pred cEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhH----------HHHHHHHHhhCCC-EEEeC-
Confidence 555544443 67899999999988888777775 32222110111222 233334444 776 76644
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCc--EEe--------ecCcccccCHHHHHHHHHHHHHh
Q 006969 227 DAGRSDRKFLYEILGEVIKVGAT--TLN--------IPDTVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 227 da~r~d~e~l~~~~~~~~~aGa~--~I~--------l~DTvG~~~P~~v~~li~~l~~~ 275 (623)
+=+....+++..+..+++.+||+ .|- ++|-.=.++|+++.++++.+++.
T Consensus 283 sHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~pd~al~D~~~sL~p~e~~~lv~~ir~i 341 (350)
T 1vr6_A 283 SHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEMKKL 341 (350)
T ss_dssp HHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHHHHH
T ss_pred CCCCcccchHHHHHHHHHHhCCCEEEEEecCCcccCCCchhhcCCHHHHHHHHHHHHHH
Confidence 22234456788888888999999 443 56999999999999999998863
No 107
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=91.15 E-value=1.5 Score=44.18 Aligned_cols=111 Identities=14% Similarity=0.152 Sum_probs=74.0
Q ss_pred ceEEeeccc-chhhHHHHHHHHhcCCCCEEEEEe----cCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCeEEEcc
Q 006969 152 PVICGLSRC-NERDIKTAWEAVKYAKRPRIHTFI----ATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVEFSP 225 (623)
Q Consensus 152 ~~i~~~~r~-~~~dI~~a~eal~~a~~~~v~i~~----~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~~V~f~~ 225 (623)
|.+.--+.. ..+++..|++.+...|.+.+++.- ..+..+. ..++. .++...++. |+. |.+.+
T Consensus 132 PV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~-~~v~L----------~ai~~lk~~~~~p-Vi~d~ 199 (262)
T 1zco_A 132 PVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATR-FTLDI----------SAVPVVKELSHLP-IIVDP 199 (262)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSS-SBCCT----------THHHHHHHHBSSC-EEECS
T ss_pred cEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcCh-hhcCH----------HHHHHHHhhhCCC-EEEEc
Confidence 555554544 678888899988888887777765 2222211 01111 233344554 776 65544
Q ss_pred cCCCCCCHHHHHHHHHHHHHcCCc--EEe--------ecCcccccCHHHHHHHHHHHHHh
Q 006969 226 EDAGRSDRKFLYEILGEVIKVGAT--TLN--------IPDTVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 226 eda~r~d~e~l~~~~~~~~~aGa~--~I~--------l~DTvG~~~P~~v~~li~~l~~~ 275 (623)
+=+....+++..++.++...||+ .|- ++|-.=.+.|+++.++++.+++.
T Consensus 200 -sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~~~ 258 (262)
T 1zco_A 200 -SHPAGRRSLVIPLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEAL 258 (262)
T ss_dssp -STTTCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHHHT
T ss_pred -CCCCCccchHHHHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHHHH
Confidence 33334456788889999999999 443 66999999999999999999864
No 108
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=91.07 E-value=5.6 Score=39.31 Aligned_cols=194 Identities=19% Similarity=0.157 Sum_probs=115.8
Q ss_pred EEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeeccc-
Q 006969 82 VFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC- 160 (623)
Q Consensus 82 I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~- 160 (623)
.+|-|| .+-..+.++..++.+...+.|+.-+-+ +|.. ++... .+... . ..+..+.+|--.
T Consensus 16 ~IDhTl------L~p~~t~~~i~~lc~eA~~~~~~aVcV-~p~~-------v~~a~-~l~~~---~-v~v~tVigFP~G~ 76 (231)
T 3ndo_A 16 LVDHTL------LKPEATPSDVTALVDEAADLGVFAVCV-SPPL-------VSVAA-GVAPS---G-LAIAAVAGFPSGK 76 (231)
T ss_dssp TEEEEC------CCTTCCHHHHHHHHHHHHHHTCSEEEE-CGGG-------HHHHH-HHCCT---T-CEEEEEESTTTCC
T ss_pred hcCccc------CCCCCCHHHHHHHHHHHHHhCCcEEEE-CHHH-------HHHHH-HhcCC---C-CeEEEEecCCCCC
Confidence 566666 224568999999999999999999988 6643 33333 22221 0 112233333211
Q ss_pred chhhHH--HHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCC----CHH
Q 006969 161 NERDIK--TAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRS----DRK 234 (623)
Q Consensus 161 ~~~dI~--~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~----d~e 234 (623)
...+++ .+-++++ .|++.|.+.+.... -.....+++.+.+...++.+...-+ .|.+ |. ... +++
T Consensus 77 ~~~~~K~~E~~~Ai~-~GAdEIDmVinig~-----lk~g~~~~v~~ei~~v~~a~~~~~l-KvIi--Et-~~L~~~~t~e 146 (231)
T 3ndo_A 77 HVPGIKATEAELAVA-AGATEIDMVIDVGA-----ALAGDLDAVSADITAVRKAVRAATL-KVIV--ES-AALLEFSGEP 146 (231)
T ss_dssp SCHHHHHHHHHHHHH-TTCSEEEEECCHHH-----HHTTCHHHHHHHHHHHHHHTTTSEE-EEEC--CH-HHHHHHTCHH
T ss_pred CcHHHHHHHHHHHHH-cCCCEEEEEeehHh-----hhcccHHHHHHHHHHHHHHccCCce-EEEE--EC-cccCCCCCHH
Confidence 111222 2223333 49999999886542 1234567778888877777753212 2333 21 133 778
Q ss_pred HHHHHHHHHHHcCCcEEeecC--c-ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEE
Q 006969 235 FLYEILGEVIKVGATTLNIPD--T-VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 311 (623)
Q Consensus 235 ~l~~~~~~~~~aGa~~I~l~D--T-vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd 311 (623)
.+.+.++.+.++|||-|--.- + .|.++++.+.-+-+.+...+ .+..+==.++ ...+++-+++||++|=
T Consensus 147 ei~~a~~ia~~aGADfVKTSTGf~~~~gAt~edv~lm~~~v~~~v----~VKaaGGIrt-----~~~a~~~i~aGa~RiG 217 (231)
T 3ndo_A 147 LLADVCRVARDAGADFVKTSTGFHPSGGASVQAVEIMARTVGERL----GVKASGGIRT-----AEQAAAMLDAGATRLG 217 (231)
T ss_dssp HHHHHHHHHHHTTCSEEECCCSCCTTCSCCHHHHHHHHHHHTTTS----EEEEESSCCS-----HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHCcCEEEcCCCCCCCCCCCHHHHHHHHHHhCCCc----eEEEeCCCCC-----HHHHHHHHHhcchhcc
Confidence 999999999999999987653 2 46788887776555544222 1222211121 2678888899999884
Q ss_pred ec
Q 006969 312 VT 313 (623)
Q Consensus 312 ~T 313 (623)
+|
T Consensus 218 tS 219 (231)
T 3ndo_A 218 LS 219 (231)
T ss_dssp ES
T ss_pred cc
Confidence 44
No 109
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=91.00 E-value=12 Score=37.88 Aligned_cols=194 Identities=13% Similarity=0.114 Sum_probs=117.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++.+.+... +.+|.|.+.+....++ |+.+-
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la~ 89 (292)
T 2vc6_A 17 RIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTAN-------GRVPVIAGAGSNSTAEAIAFVR 89 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCccHHHHHHHHH
Confidence 367788889999999999999876 3 466666665 55555555542 2357888887655444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~aG 247 (623)
. ...+|++.+-+..|-. .+.|.++.++-..+..+ ..++..+-|+ |. .+...+++.+.++++. .
T Consensus 90 ~-A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La~~---~- 154 (292)
T 2vc6_A 90 H-AQNAGADGVLIVSPYY-------NKPTQEGIYQHFKAIDA---ASTIPIIVYNIPGRSAIEIHVETLARIFED---C- 154 (292)
T ss_dssp H-HHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHH---HCSSCEEEEECHHHHSCCCCHHHHHHHHHH---C-
T ss_pred H-HHHcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHH---hCCCCEEEEeCccccCcCCCHHHHHHHHhh---C-
Confidence 3 3557999887766532 24477776665554443 2355545554 32 2345677777776531 3
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|- ..++.++++ ..++ +..+ +-.+++ ..+.++.+|++.+ +.| .+|...+
T Consensus 155 pnIvgiK~s~gd--~~~~~~~~~----~~~~--~f~v-~~G~d~------~~~~~l~~G~~G~---is~----~~n~~P~ 212 (292)
T 2vc6_A 155 PNVKGVXDATGN--LLRPSLERM----ACGE--DFNL-LTGEDG------TALGYMAHGGHGC---ISV----TANVAPA 212 (292)
T ss_dssp TTEEEEEECSCC--THHHHHHHH----HSCT--TSEE-EESCGG------GHHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEecCCCC--HHHHHHHHH----HcCC--CEEE-EECchH------HHHHHHHcCCCEE---Eec----HHHhCHH
Confidence 579999999985 344555443 3432 2223 334433 2456788898743 333 4577777
Q ss_pred HHHHHHH
Q 006969 328 EVVMAFK 334 (623)
Q Consensus 328 evv~~L~ 334 (623)
.++...+
T Consensus 213 ~~~~l~~ 219 (292)
T 2vc6_A 213 LCADFQQ 219 (292)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665544
No 110
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=90.89 E-value=0.45 Score=47.00 Aligned_cols=189 Identities=10% Similarity=0.015 Sum_probs=100.8
Q ss_pred HHHHHHhHcCCCEEEEecCC--CChhHHHHHHHHHHHhccccccCCCccceEEeec-ccch-hhHHHHHHHHhcCCCCEE
Q 006969 105 DIARQLAKLGVDIIEAGFPA--ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS-RCNE-RDIKTAWEAVKYAKRPRI 180 (623)
Q Consensus 105 ~Ia~~L~~~Gvd~IEvGfP~--~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~-r~~~-~dI~~a~eal~~a~~~~v 180 (623)
+.++.+.++|++.||+.... ..+ +.+.++.+.+..+-.+. ...+. .-+. .... +.++.+++..+..|.+.|
T Consensus 27 ~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i~---~~~~~-~~~~~~~~~~~~~~~~i~~A~~lGa~~v 101 (264)
T 1yx1_A 27 SFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLECV---FSSPL-ELWREDGQLNPELEPTLRRAEACGAGWL 101 (264)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEEE---EEEEE-EEECTTSSBCTTHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEEE---Eecch-hhcCCchhHHHHHHHHHHHHHHcCCCEE
Confidence 45677788899999996321 122 55556655554221110 00000 0011 0112 567777777677799988
Q ss_pred EEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC-CCCHHHHHHHHHHHHHcCCcEEeec-Cccc
Q 006969 181 HTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVIKVGATTLNIP-DTVG 258 (623)
Q Consensus 181 ~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~-r~d~e~l~~~~~~~~~aGa~~I~l~-DTvG 258 (623)
.+.....+. .+ .+.++.++|++.|+. +.+-+.... -.+++.+.++++.+.+.+.. +.++ ||.-
T Consensus 102 ~~~~g~~~~----------~~---~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~ll~~v~~~~~~-vg~~~D~g~ 166 (264)
T 1yx1_A 102 KVSLGLLPE----------QP---DLAALGRRLARHGLQ-LLVENDQTPQGGRIEVLERFFRLAERQQLD-LAMTFDIGN 166 (264)
T ss_dssp EEEEECCCS----------SC---CHHHHHHHHTTSSCE-EEEECCSSHHHHCHHHHHHHHHHHHHTTCS-EEEEEETTG
T ss_pred EEecCCCCc----------HH---HHHHHHHHHHhcCCE-EEEecCCCCCCCCHHHHHHHHHHHHhcCCC-eEEEEehhh
Confidence 776543210 01 345677888888874 555332110 13567777888777655655 4443 8822
Q ss_pred c-cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCc-ccHHHHHHHHHh
Q 006969 259 I-TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGN-ASLEEVVMAFKC 335 (623)
Q Consensus 259 ~-~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGN-a~lEevv~~L~~ 335 (623)
. .......+.++.+..+ ...+|.+|..+-. +-+..+ .-+|+ |+ .+...++..|..
T Consensus 167 ~~~~~~d~~~~~~~~~~~-------i~~vHlkD~~~~~----------~~~~~~---~~~G~--G~~id~~~~~~~L~~ 223 (264)
T 1yx1_A 167 WRWQEQAADEAALRLGRY-------VGYVHCKAVIRNR----------DGKLVA---VPPSA--ADLQYWQRLLQHFPE 223 (264)
T ss_dssp GGGGTCCHHHHHHHHGGG-------EEEEEECEEEECT----------TSCEEE---ECCCH--HHHHHHHHHHTTSCT
T ss_pred hhhcCCCHHHHHHHhhhh-------EEEEEeecccCCC----------CCceee---ECCCC--CCccCHHHHHHHhhc
Confidence 2 2222333444444433 3588888765420 111111 12444 78 899988888875
No 111
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=90.87 E-value=0.92 Score=46.28 Aligned_cols=106 Identities=19% Similarity=0.145 Sum_probs=83.2
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 298 (623)
.|.+ .+..|.+-+.++++.+++.|++.|.++-|+|= ++.+|-.++++.+.+...+ ++++-+|+ +|+.--++..
T Consensus 11 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~l 88 (291)
T 3tak_A 11 TPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANK--RIPIIAGTGANSTREAIEL 88 (291)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC--CCeEEEeCCCCCHHHHHHH
Confidence 4443 35789999999999999999999999999994 6899999999999887765 36677765 7899999999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+..|-++||+.+=..---+- + .+-++++..++.
T Consensus 89 a~~a~~~Gadavlv~~P~y~-~---~~~~~l~~~f~~ 121 (291)
T 3tak_A 89 TKAAKDLGADAALLVTPYYN-K---PTQEGLYQHYKA 121 (291)
T ss_dssp HHHHHHHTCSEEEEECCCSS-C---CCHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEcCCCCC-C---CCHHHHHHHHHH
Confidence 99999999999866543332 2 345566655543
No 112
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=90.87 E-value=3.3 Score=42.49 Aligned_cols=108 Identities=17% Similarity=0.142 Sum_probs=72.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCccc-----------ccCHHHH
Q 006969 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEF 265 (623)
Q Consensus 197 ~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG-----------~~~P~~v 265 (623)
.|.+|++..+...++- .... |..+.+.++ -+++.+.+.++.+.++|+..|.|-|.++ ....+++
T Consensus 66 vt~~em~~~~~~I~r~---~~~P-viaD~d~Gy-g~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~ 140 (298)
T 3eoo_A 66 STMDDVLVDANRITNA---TNLP-LLVDIDTGW-GGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEM 140 (298)
T ss_dssp CCHHHHHHHHHHHHHH---CCSC-EEEECTTCS-SSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHH
T ss_pred CCHHHHHHHHHHHHhh---cCCe-EEEECCCCC-CCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHH
Confidence 4788888877666543 3444 778886665 4899999999999999999999999986 3344566
Q ss_pred HHHHHHHHHhCCCCcceeEEEeecCC----cchHHHHHHHHHHhCCCEE
Q 006969 266 GKLIADIKANTPGIENVVISTHCQND----LGLSTANTIAGACAGARQV 310 (623)
Q Consensus 266 ~~li~~l~~~~~~~~~v~i~~H~HND----~GlAvANslaAv~aGA~~V 310 (623)
.+.|+..++.-.+. +..|-.=+-.- +--++.-+.+..+||||.|
T Consensus 141 ~~ri~Aa~~A~~~~-~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~i 188 (298)
T 3eoo_A 141 VDRIKAAVDARTDE-TFVIMARTDAAAAEGIDAAIERAIAYVEAGADMI 188 (298)
T ss_dssp HHHHHHHHHHCSST-TSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhccCC-CeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEE
Confidence 66676666554222 23343333222 2225566677788888876
No 113
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=90.60 E-value=1.1 Score=45.91 Aligned_cols=106 Identities=19% Similarity=0.174 Sum_probs=83.4
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 298 (623)
.|.+ .+..|.+-+.++++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ ++++-+|+ +|+.--++..
T Consensus 17 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~l 94 (297)
T 3flu_A 17 TPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAK--RVPVIAGTGANNTVEAIAL 94 (297)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHH
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCcCHHHHHHH
Confidence 4443 3578999999999999999999999999999 46899999999999887765 36666665 7899999999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+..|-++||+.+=..---+- + .+-++++..++.
T Consensus 95 a~~a~~~Gadavlv~~P~y~-~---~~~~~l~~~f~~ 127 (297)
T 3flu_A 95 SQAAEKAGADYTLSVVPYYN-K---PSQEGIYQHFKT 127 (297)
T ss_dssp HHHHHHTTCSEEEEECCCSS-C---CCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCCCC-C---CCHHHHHHHHHH
Confidence 99999999999876544332 1 344566655543
No 114
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=90.57 E-value=14 Score=36.43 Aligned_cols=180 Identities=19% Similarity=0.162 Sum_probs=107.1
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHH-HHHHHhccccccCCCccceEEeecc--cch----hhHHHH
Q 006969 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVR-TIAKEVGNAVDAESGYVPVICGLSR--CNE----RDIKTA 168 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~-~i~~~~~~~~~~~~~l~~~i~~~~r--~~~----~dI~~a 168 (623)
-..+.++..++.+...+.|++-+-+ +| .-. .++ .+.... .+ .+..+.+|-. ... ..++.|
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv-~p----~~v-~a~~~l~~~~--~v-----~v~tvigFP~G~~~~~~k~~e~~~A 97 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVL-TP----VYT-VKISGLAEKL--GV-----KLCSVIGFPLGQAPLEVKLVEAQTV 97 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEE-CH----HHH-HHHHHHHHHH--TC-----CEEEEESTTTCCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEE-ch----HHh-eeehHhCCCC--Cc-----eEEEEeCCCCCCCcHHHHHHHHHHH
Confidence 4468999999999999999999987 44 322 222 222210 10 1122233311 111 234444
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCC
Q 006969 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGA 248 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa 248 (623)
++. |++.|.+.+..... .+++++.+...++.+.+.|.. +-+-.|... .+.+.+...++.+.++||
T Consensus 98 v~~----GAdEID~vinig~~---------~~~v~~ei~~v~~a~~~~g~~-lKvIlEt~~-L~~e~i~~a~ria~eaGA 162 (234)
T 1n7k_A 98 LEA----GATELDVVPHLSLG---------PEAVYREVSGIVKLAKSYGAV-VKVILEAPL-WDDKTLSLLVDSSRRAGA 162 (234)
T ss_dssp HHH----TCCEEEECCCGGGC---------HHHHHHHHHHHHHHHHHTTCE-EEEECCGGG-SCHHHHHHHHHHHHHTTC
T ss_pred HHc----CCCEEEEeccchHH---------HHHHHHHHHHHHHHHhhcCCe-EEEEEeccC-CCHHHHHHHHHHHHHhCC
Confidence 544 89999988765432 227788888888888887753 433333332 346889999999999999
Q ss_pred cEEeecCcc---cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 249 TTLNIPDTV---GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 249 ~~I~l~DTv---G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
|.|--.-.. |.++|+.+.- +.+++.+. . .+.++==.++ ...+++-+++||++|=+
T Consensus 163 DfVKTsTG~~~~~gAt~~dv~l--~~m~~~v~-v-~VKaaGGirt-----~~~al~~i~aGa~RiG~ 220 (234)
T 1n7k_A 163 DIVKTSTGVYTKGGDPVTVFRL--ASLAKPLG-M-GVKASGGIRS-----GIDAVLAVGAGADIIGT 220 (234)
T ss_dssp SEEESCCSSSCCCCSHHHHHHH--HHHHGGGT-C-EEEEESSCCS-----HHHHHHHHHTTCSEEEE
T ss_pred CEEEeCCCCCCCCCCCHHHHHH--HHHHHHHC-C-CEEEecCCCC-----HHHHHHHHHcCccccch
Confidence 999875321 4456666443 11444332 1 1333322232 46777788999997733
No 115
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=90.56 E-value=1.2 Score=45.86 Aligned_cols=105 Identities=16% Similarity=0.157 Sum_probs=82.2
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 298 (623)
.|.+ .+..|.+-+.++++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ +++|-+++ +|+.--++..
T Consensus 21 TPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--rvpViaGvg~~~t~~ai~l 98 (303)
T 2wkj_A 21 TPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKG--KIKLIAHVGCVSTAESQQL 98 (303)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSSHHHHHHH
T ss_pred cCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHHHHHH
Confidence 4543 3678999999999999999999999999988 57899999999999987765 46676665 6788888999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
+..|-++||+.+=..---+-. .+-++++..++
T Consensus 99 a~~A~~~Gadavlv~~P~y~~----~s~~~l~~~f~ 130 (303)
T 2wkj_A 99 AASAKRYGFDAVSAVTPFYYP----FSFEEHCDHYR 130 (303)
T ss_dssp HHHHHHHTCSEEEEECCCSSC----CCHHHHHHHHH
T ss_pred HHHHHhCCCCEEEecCCCCCC----CCHHHHHHHHH
Confidence 999999999998776544322 24556665544
No 116
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=90.51 E-value=1.4 Score=46.85 Aligned_cols=17 Identities=24% Similarity=0.280 Sum_probs=14.7
Q ss_pred cCcccHHHHHHHHHhcc
Q 006969 321 AGNASLEEVVMAFKCRG 337 (623)
Q Consensus 321 aGNa~lEevv~~L~~~~ 337 (623)
.|.++..+++.+|...+
T Consensus 306 ~G~vD~~~i~~aL~~~g 322 (386)
T 3bdk_A 306 AGDIDMNAVVKLLVDYD 322 (386)
T ss_dssp GSSCCHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHhC
Confidence 68999999999998765
No 117
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=90.49 E-value=7.4 Score=40.03 Aligned_cols=193 Identities=17% Similarity=0.186 Sum_probs=115.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+. +.++ |+.+-
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~-------grvpViaGvg~-st~~ai~la~ 100 (314)
T 3d0c_A 29 EIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVN-------GRATVVAGIGY-SVDTAIELGK 100 (314)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEEECS-SHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhC-------CCCeEEecCCc-CHHHHHHHHH
Confidence 478888899999999999999876 3 466666665 55565565542 33578888877 5444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCc
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGAT 249 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~ 249 (623)
. ...+|++.+-+..|-. .+.|.+++++-..+..+ ..++..+-|+ -.+. .+++.+.+++ +. ..
T Consensus 101 ~-A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~---a~~lPiilYn-~tg~-l~~~~~~~La----~~-pn 162 (314)
T 3d0c_A 101 S-AIDSGADCVMIHQPVH-------PYITDAGAVEYYRNIIE---ALDAPSIIYF-KDAH-LSDDVIKELA----PL-DK 162 (314)
T ss_dssp H-HHHTTCSEEEECCCCC-------SCCCHHHHHHHHHHHHH---HSSSCEEEEE-CCTT-SCTHHHHHHT----TC-TT
T ss_pred H-HHHcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hCCCCEEEEe-CCCC-cCHHHHHHHH----cC-CC
Confidence 3 3557999887765532 24566666665554433 3345545667 2333 5666666554 32 57
Q ss_pred EEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHHHH
Q 006969 250 TLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEV 329 (623)
Q Consensus 250 ~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEev 329 (623)
.+.+.||.|- ..++.++++. .++..+ +.+=+ |..--..+.++.+|++.+ +.| .+|+..+.+
T Consensus 163 IvgiKdssgd--~~~~~~~~~~----~~~~~~--f~v~~----G~d~~~~~~~l~~G~~G~---is~----~an~~P~~~ 223 (314)
T 3d0c_A 163 LVGIKYAIND--IQRVTQVMRA----VPKSSN--VAFIC----GTAEKWAPFFYHAGAVGF---TSG----LVNVFPQKS 223 (314)
T ss_dssp EEEEEECCCC--HHHHHHHHHH----SCGGGC--CEEEE----TTHHHHHHHHHHHTCCEE---EES----GGGTCHHHH
T ss_pred EEEEEeCCCC--HHHHHHHHHh----cCCCCC--EEEEE----eCcHHHHHHHHHcCCCEE---Eec----HHHhhHHHH
Confidence 9999999984 4555555443 331001 22212 221115677888898753 333 456766666
Q ss_pred HHHHH
Q 006969 330 VMAFK 334 (623)
Q Consensus 330 v~~L~ 334 (623)
+...+
T Consensus 224 ~~l~~ 228 (314)
T 3d0c_A 224 FALLE 228 (314)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65444
No 118
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=90.39 E-value=2.1 Score=45.11 Aligned_cols=177 Identities=14% Similarity=0.146 Sum_probs=89.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEe----cCCCC-----hhHHHHHHHHHHHhccccccCCCccceEEe------------
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAG----FPAAS-----KEDFEAVRTIAKEVGNAVDAESGYVPVICG------------ 156 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvG----fP~~s-----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~------------ 156 (623)
++.+++++.+. ++|++.||+. +|... +.+.+.++.+.+..+-.+ ..++.
T Consensus 33 ~~~~e~l~~aa---~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i-------~~~~~~~~~~p~~~~g~ 102 (387)
T 1bxb_A 33 LDPVYVVHKLA---ELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKV-------PMVTANLFSDPAFKDGA 102 (387)
T ss_dssp CCHHHHHHHHH---HHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBC-------CEEECCCSSSGGGGGCS
T ss_pred CCHHHHHHHHH---HhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEE-------EEEecCCCCCccccCCC
Confidence 57777666655 5599999998 67432 345556666555433221 11221
Q ss_pred ecccch-------hhHHHHHHHHhcCCCCEEEEEecCCH--HHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEEcc
Q 006969 157 LSRCNE-------RDIKTAWEAVKYAKRPRIHTFIATSG--IHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSP 225 (623)
Q Consensus 157 ~~r~~~-------~dI~~a~eal~~a~~~~v~i~~~~Sd--~h~~~~l~~t~ee~l~~~~~~v~~ak~~--G~~~V~f~~ 225 (623)
++...+ +.++++++..+..|.+.|.+...... ...........+...+.+.++++++++. |+. +.+-+
T Consensus 103 l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~-l~lE~ 181 (387)
T 1bxb_A 103 FTSPDPWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYR-FALEP 181 (387)
T ss_dssp TTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCE-EEECC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcE-EEEec
Confidence 111111 22344555555568888866543110 0000011223466777788888999988 553 44433
Q ss_pred cCC------CCCCHHHHHHHHHHHHHcCCcE-Eee-cCcccccC-HHHHHHHHHHHHHhCCCCcceeEEEeecCCcc
Q 006969 226 EDA------GRSDRKFLYEILGEVIKVGATT-LNI-PDTVGITM-PTEFGKLIADIKANTPGIENVVISTHCQNDLG 293 (623)
Q Consensus 226 eda------~r~d~e~l~~~~~~~~~aGa~~-I~l-~DTvG~~~-P~~v~~li~~l~~~~~~~~~v~i~~H~HND~G 293 (623)
... .-.+++.+.++++ +.+... +.+ .||.=... -..+.+.++.+.. .+ -...+|+++..+
T Consensus 182 ~~~~~~~~~~~~t~~~~~~ll~---~v~~~~~vgl~lD~gH~~~~g~d~~~~l~~~~~-~~----~i~~vHl~D~~~ 250 (387)
T 1bxb_A 182 KPNEPRGDIYFATVGSMLAFIH---TLDRPERFGLNPEFAHETMAGLNFVHAVAQALD-AG----KLFHIDLNDQRM 250 (387)
T ss_dssp CSSSSSSEESSCSHHHHHHHHT---TSSSGGGEEECCBHHHHHHTTCCHHHHHHHHHH-TT----CBCCEECCBCCS
T ss_pred CCCCCCCCccCCCHHHHHHHHH---HcCCccceEEEEecCcccccCCCHHHHHHHhcc-CC----cEEEEEeCCCCC
Confidence 221 2235666666654 345433 433 46622211 1223444555541 12 135788887644
No 119
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=90.29 E-value=1.4 Score=46.22 Aligned_cols=148 Identities=17% Similarity=0.207 Sum_probs=87.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEE--------------------EEecCCCChhHHHHHHHHHHHhccccccCCCccceEEe
Q 006969 97 TLTSKEKLDIARQLAKLGVDII--------------------EAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG 156 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~I--------------------EvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~ 156 (623)
.|+.++=..+.+.-.+.|+..+ -+|+. .=+++..++.+++. + .|.|..
T Consensus 87 ~l~~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI~S~--~~~n~~LL~~va~~-g---------kPviLs 154 (349)
T 2wqp_A 87 ALNEEDEIKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKIGSG--ECNNYPLIKLVASF-G---------KPIILS 154 (349)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEECGG--GTTCHHHHHHHHTT-C---------SCEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEECcc--cccCHHHHHHHHhc-C---------CeEEEE
Confidence 3566666666666666665554 33322 11345666666552 1 267777
Q ss_pred ecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEEcccCCCCCCHH
Q 006969 157 LSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPEDAGRSDRK 234 (623)
Q Consensus 157 ~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~--G~~~V~f~~eda~r~d~e 234 (623)
-+.+..++|+.|++.+...|.+ |.+.=.+|. +-.++++ ++ ..+|..+|+. ++. |.|+--..+
T Consensus 155 tGmat~~Ei~~Ave~i~~~G~~-iiLlhc~s~------Yp~~~~~-~n--L~ai~~lk~~f~~lp-Vg~sdHt~G----- 218 (349)
T 2wqp_A 155 TGMNSIESIKKSVEIIREAGVP-YALLHCTNI------YPTPYED-VR--LGGMNDLSEAFPDAI-IGLSDHTLD----- 218 (349)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCC-EEEEECCCC------SSCCGGG-CC--THHHHHHHHHCTTSE-EEEECCSSS-----
T ss_pred CCCCCHHHHHHHHHHHHHcCCC-EEEEeccCC------CCCChhh-cC--HHHHHHHHHHCCCCC-EEeCCCCCc-----
Confidence 7777888999998888776664 333212221 1112211 11 1344455544 454 666321111
Q ss_pred HHHHHHHHHHHcCCcEEe--------e--cCcccccCHHHHHHHHHHHHH
Q 006969 235 FLYEILGEVIKVGATTLN--------I--PDTVGITMPTEFGKLIADIKA 274 (623)
Q Consensus 235 ~l~~~~~~~~~aGa~~I~--------l--~DTvG~~~P~~v~~li~~l~~ 274 (623)
..+..+++.+||+.|- + +|-.=.++|+++.++++.+++
T Consensus 219 --~~~~~AAvAlGA~iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~ 266 (349)
T 2wqp_A 219 --NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHA 266 (349)
T ss_dssp --SHHHHHHHHHTCCEEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHhCCCEEEeCCCccccCCCCChhhhCCHHHHHHHHHHHHH
Confidence 4677788889998663 4 788888999999999999986
No 120
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=90.26 E-value=18 Score=36.99 Aligned_cols=197 Identities=10% Similarity=0.062 Sum_probs=117.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEe-----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAG-----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvG-----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.||+-|=+. ++.-+.+|. +.++.+.+... +.+|.|.+.+..+.++ |+.+-
T Consensus 31 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la~ 103 (307)
T 3s5o_A 31 EVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMP-------KNRLLLAGSGCESTQATVEMTV 103 (307)
T ss_dssp CBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSC-------TTSEEEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcC-------CCCcEEEecCCCCHHHHHHHHH
Confidence 4788888899999999999988763 465666665 44555555432 3457888877544443 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~aG 247 (623)
....+|++.+-+..|-.- +-+.|.+++++-..+..+. .++..+-|+ |. .+...+++.+.+++ + -
T Consensus 104 -~A~~~Gadavlv~~P~y~-----~~~~s~~~l~~~f~~ia~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 169 (307)
T 3s5o_A 104 -SMAQVGADAAMVVTPCYY-----RGRMSSAALIHHYTKVADL---SPIPVVLYSVPANTGLDLPVDAVVTLS----Q-H 169 (307)
T ss_dssp -HHHHTTCSEEEEECCCTT-----GGGCCHHHHHHHHHHHHHH---CSSCEEEEECHHHHSCCCCHHHHHHHH----T-S
T ss_pred -HHHHcCCCEEEEcCCCcC-----CCCCCHHHHHHHHHHHHhh---cCCCEEEEeCCcccCCCCCHHHHHHHh----c-C
Confidence 335579998877655421 1124777776666555433 355545564 32 23456777766654 3 3
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|- ..++.++++. .++. +..+ +-.+++ ..+.++..|++.+ +.| .+|.-.+
T Consensus 170 pnIvgiKdssgd--~~~~~~~~~~----~~~~-~f~v-~~G~d~------~~l~~l~~G~~G~---is~----~an~~P~ 228 (307)
T 3s5o_A 170 PNIVGMXDSGGD--VTRIGLIVHK----TRKQ-DFQV-LAGSAG------FLMASYALGAVGG---VCA----LANVLGA 228 (307)
T ss_dssp TTEEEEEECSCC--HHHHHHHHHH----TTTS-SCEE-EESSGG------GHHHHHHHTCCEE---ECG----GGGTCHH
T ss_pred CCEEEEEcCCCC--HHHHHHHHHh----ccCC-CeEE-EeCcHH------HHHHHHHcCCCEE---Eec----hhhhhHH
Confidence 589999999884 3455555443 2111 1222 344443 2567888898643 443 4677777
Q ss_pred HHHHHHHh
Q 006969 328 EVVMAFKC 335 (623)
Q Consensus 328 evv~~L~~ 335 (623)
.++...+.
T Consensus 229 ~~~~l~~a 236 (307)
T 3s5o_A 229 QVCQLERL 236 (307)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655443
No 121
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=90.21 E-value=1.2 Score=45.63 Aligned_cols=106 Identities=20% Similarity=0.168 Sum_probs=81.8
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEe-ecCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvAN 298 (623)
.|.+ .+..|.+-+.++++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ +++|-++ .+|+.--++..
T Consensus 22 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--rvpViaGvg~~~t~~ai~l 99 (301)
T 1xky_A 22 TPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDK--RVPVIAGTGSNNTHASIDL 99 (301)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCHHHHHHH
T ss_pred CcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CceEEeCCCCCCHHHHHHH
Confidence 5543 3578999999999999999999999999988 56899999999999887654 3555554 47888889999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+..|-++||+.+=..---+- + .+-++++..++.
T Consensus 100 a~~A~~~Gadavlv~~P~y~-~---~s~~~l~~~f~~ 132 (301)
T 1xky_A 100 TKKATEVGVDAVMLVAPYYN-K---PSQEGMYQHFKA 132 (301)
T ss_dssp HHHHHHTTCSEEEEECCCSS-C---CCHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEcCCCCC-C---CCHHHHHHHHHH
Confidence 99999999999876554432 1 244666655543
No 122
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=90.19 E-value=19 Score=37.37 Aligned_cols=198 Identities=18% Similarity=0.229 Sum_probs=120.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.||+-|=+ | ++.-+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 48 ~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~-------grvpViaGvg~~st~eai~la~ 120 (343)
T 2v9d_A 48 QLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVD-------RRVPVLIGTGGTNARETIELSQ 120 (343)
T ss_dssp SBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCSSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHHH
Confidence 478888899999999999998877 3 465666665 55555555542 3357888887655444 44433
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~aG 247 (623)
. ...+|++.+-+..|-. ++-|.+++++-..+..+ ..++..+-|+ |. .+...+++.+.++++ +.
T Consensus 121 ~-A~~~Gadavlv~~P~Y-------~~~s~~~l~~~f~~VA~---a~~lPiilYn~P~~tg~~l~~e~~~~La~---~~- 185 (343)
T 2v9d_A 121 H-AQQAGADGIVVINPYY-------WKVSEANLIRYFEQVAD---SVTLPVMLYNFPALTGQDLTPALVKTLAD---SR- 185 (343)
T ss_dssp H-HHHHTCSEEEEECCSS-------SCCCHHHHHHHHHHHHH---TCSSCEEEEECHHHHSSCCCHHHHHHHHH---HC-
T ss_pred H-HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCchhcCcCCCHHHHHHHHH---hC-
Confidence 2 3446999887766542 24577776665554433 3355545554 32 234567787777753 22
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|- ..++.++++.+...-++ ..+ +-..+++ .+.++.+|++. .+.| .+|+..+
T Consensus 186 pnIvgiKdssgd--~~~~~~l~~~~~~~~~~---f~v-~~G~D~~------~l~~l~~Ga~G---~is~----~anv~P~ 246 (343)
T 2v9d_A 186 SNIIGIKDTIDS--VAHLRSMIHTVKGAHPH---FTV-LCGYDDH------LFNTLLLGGDG---AISA----SGNFAPQ 246 (343)
T ss_dssp TTEEEEEECCSC--HHHHHHHHHHHHHHCTT---CEE-EESSGGG------HHHHHHTTCCE---ECCG----GGTTCHH
T ss_pred CCEEEEEeCCCC--HHHHHHHHHhcCCCCCC---EEE-EECcHHH------HHHHHHCCCCE---EEeC----HHHhHHH
Confidence 579999999985 45677777665421122 122 3344432 45677789763 3444 5677777
Q ss_pred HHHHHHHh
Q 006969 328 EVVMAFKC 335 (623)
Q Consensus 328 evv~~L~~ 335 (623)
.++...+.
T Consensus 247 ~~~~l~~a 254 (343)
T 2v9d_A 247 VSVNLLKA 254 (343)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76665543
No 123
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=90.18 E-value=3.2 Score=42.15 Aligned_cols=75 Identities=13% Similarity=0.123 Sum_probs=59.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCccc-----ccCHHHHHHHHHH
Q 006969 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----ITMPTEFGKLIAD 271 (623)
Q Consensus 197 ~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG-----~~~P~~v~~li~~ 271 (623)
.|.+|++..+...++-. ... |..+.+.++-.+++.+.+.++.++++|+..|.|-|.++ ...++++.+.|+.
T Consensus 59 vt~~em~~~~~~I~~~~---~~p-viaD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~a 134 (275)
T 2ze3_A 59 LTRDEMGREVEAIVRAV---AIP-VNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEA 134 (275)
T ss_dssp SCHHHHHHHHHHHHHHC---SSC-EEEECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhc---CCC-EEeecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHH
Confidence 57888888777655543 244 88888777666899999999999999999999999984 4556778888888
Q ss_pred HHHh
Q 006969 272 IKAN 275 (623)
Q Consensus 272 l~~~ 275 (623)
+++.
T Consensus 135 a~~a 138 (275)
T 2ze3_A 135 ARAA 138 (275)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8776
No 124
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=90.07 E-value=5.5 Score=40.81 Aligned_cols=122 Identities=13% Similarity=0.107 Sum_probs=77.9
Q ss_pred HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE-cccCCC--CCCHHHHHHHHH
Q 006969 165 IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAG--RSDRKFLYEILG 241 (623)
Q Consensus 165 I~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f-~~eda~--r~d~e~l~~~~~ 241 (623)
++.|++ .|++.|.+.+-..+ ....+.++.+.+.++.|++.|+. +.+ ++ .+. ..|++.+...++
T Consensus 131 ve~Av~----~GAdaV~~~i~~Gs--------~~~~~~l~~i~~v~~~a~~~Glp-vIie~~-~G~~~~~d~e~i~~aar 196 (295)
T 3glc_A 131 MDDAVR----LNSCAVAAQVYIGS--------EYEHQSIKNIIQLVDAGMKVGMP-TMAVTG-VGKDMVRDQRYFSLATR 196 (295)
T ss_dssp HHHHHH----TTCSEEEEEECTTS--------TTHHHHHHHHHHHHHHHHTTTCC-EEEEEC-C----CCSHHHHHHHHH
T ss_pred HHHHHH----CCCCEEEEEEECCC--------CcHHHHHHHHHHHHHHHHHcCCE-EEEECC-CCCccCCCHHHHHHHHH
Confidence 455555 48887766543321 23557888999999999999987 433 22 110 267888888999
Q ss_pred HHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEE
Q 006969 242 EVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 311 (623)
Q Consensus 242 ~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd 311 (623)
.+.++|||.|-.+=| ++.+ +.+.+..+ ++ +.+.==.+-+.--.+.+...|+++||+.+-
T Consensus 197 iA~elGAD~VKt~~t-----~e~~----~~vv~~~~-vP-Vv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~ 255 (295)
T 3glc_A 197 IAAEMGAQIIKTYYV-----EKGF----ERIVAGCP-VP-IVIAGGKKLPEREALEMCWQAIDQGASGVD 255 (295)
T ss_dssp HHHHTTCSEEEEECC-----TTTH----HHHHHTCS-SC-EEEECCSCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHhCCCEEEeCCC-----HHHH----HHHHHhCC-Cc-EEEEECCCCCHHHHHHHHHHHHHhCCeEEE
Confidence 999999999988743 3333 44454432 11 222222232344567888899999999664
No 125
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=90.06 E-value=1.2 Score=45.38 Aligned_cols=98 Identities=18% Similarity=0.117 Sum_probs=77.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEe-ecCCcchHHHHHHHHHHhC
Q 006969 231 SDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANTIAGACAG 306 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANslaAv~aG 306 (623)
.|.+-+.++++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ ++++-+| .+|+.--++..+..|-++|
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pvi~Gvg~~~t~~ai~la~~a~~~G 96 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK--RIPVIAGTGSNNTAASIAMSKWAESIG 96 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCcccHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999988 56899999999999887655 3455554 4778888999999999999
Q ss_pred CCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 307 ARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 307 A~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
|+.+=..---+-. .+-++++..++
T Consensus 97 adavlv~~P~y~~----~s~~~l~~~f~ 120 (291)
T 3a5f_A 97 VDGLLVITPYYNK----TTQKGLVKHFK 120 (291)
T ss_dssp CSEEEEECCCSSC----CCHHHHHHHC-
T ss_pred CCEEEEcCCCCCC----CCHHHHHHHHH
Confidence 9998765443321 24556655544
No 126
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=90.02 E-value=1.3 Score=46.11 Aligned_cols=106 Identities=17% Similarity=0.163 Sum_probs=82.3
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEe-ecCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvAN 298 (623)
.|-+ .+..|.+-+.++++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ +++|-++ ..|+.--++..
T Consensus 44 TPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg~~st~eai~l 121 (332)
T 2r8w_A 44 TPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRG--RRTLMAGIGALRTDEAVAL 121 (332)
T ss_dssp CCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECCSSHHHHHHH
T ss_pred CCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHHHHHH
Confidence 4543 3578999999999999999999999999998 56899999999999987765 3555554 46788889999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+..|-++||+.|=..---+- + .+-++++..++.
T Consensus 122 a~~A~~~Gadavlv~~P~Y~-~---~s~~~l~~~f~~ 154 (332)
T 2r8w_A 122 AKDAEAAGADALLLAPVSYT-P---LTQEEAYHHFAA 154 (332)
T ss_dssp HHHHHHHTCSEEEECCCCSS-C---CCHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCC-C---CCHHHHHHHHHH
Confidence 99999999999866544332 2 345666655543
No 127
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=90.01 E-value=3.7 Score=41.76 Aligned_cols=139 Identities=10% Similarity=0.070 Sum_probs=83.0
Q ss_pred cchhhHHHHHHHHhcCCCC-EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-eEEEcccCCCCCCHHHH
Q 006969 160 CNERDIKTAWEAVKYAKRP-RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDAGRSDRKFL 236 (623)
Q Consensus 160 ~~~~dI~~a~eal~~a~~~-~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~-~V~f~~eda~r~d~e~l 236 (623)
...++...+++.+..+|.+ .|.+-++..-......++.+.+. +.+.++.+|+. ++. .|-.++. .+.+.+
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~----~~~iv~~vr~~~~~Pv~vKi~~~----~~~~~~ 174 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEA----TEKLLKEVFTFFTKPLGVKLPPY----FDLVHF 174 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHH----HHHHHHHHTTTCCSCEEEEECCC----CSHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHH----HHHHHHHHHHhcCCCEEEEECCC----CCHHHH
Confidence 3566777777777778888 77665432111111123345443 45566666654 333 1233542 367778
Q ss_pred HHHHHHHHHcCCcEEeecCccc----------------------ccCH---HHHHHHHHHHHHhCCCCcceeEEEeecCC
Q 006969 237 YEILGEVIKVGATTLNIPDTVG----------------------ITMP---TEFGKLIADIKANTPGIENVVISTHCQND 291 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~DTvG----------------------~~~P---~~v~~li~~l~~~~~~~~~v~i~~H~HND 291 (623)
.++++.+.++|++.|.+.+|.+ +.-| ....++++.+++.+++ ++||..=.
T Consensus 175 ~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~--~ipvi~~G--- 249 (311)
T 1jub_A 175 DIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKP--EIQIIGTG--- 249 (311)
T ss_dssp HHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCT--TSEEEEES---
T ss_pred HHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCC--CCCEEEEC---
Confidence 8999999999999999988752 1111 1234678888887753 35665433
Q ss_pred cchH-HHHHHHHHHhCCCEEEe
Q 006969 292 LGLS-TANTIAGACAGARQVEV 312 (623)
Q Consensus 292 ~GlA-vANslaAv~aGA~~Vd~ 312 (623)
|.- -..+..++.+||+.|..
T Consensus 250 -GI~~~~da~~~l~~GAd~V~v 270 (311)
T 1jub_A 250 -GIETGQDAFEHLLCGATMLQI 270 (311)
T ss_dssp -SCCSHHHHHHHHHHTCSEEEE
T ss_pred -CCCCHHHHHHHHHcCCCEEEE
Confidence 332 24666777889998854
No 128
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=90.01 E-value=1 Score=45.02 Aligned_cols=153 Identities=14% Similarity=0.128 Sum_probs=91.2
Q ss_pred CCHHHHHHHHHHHhHcC--CCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEe--ecccc-hhhHHHHHHHH
Q 006969 98 LTSKEKLDIARQLAKLG--VDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG--LSRCN-ERDIKTAWEAV 172 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~G--vd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~--~~r~~-~~dI~~a~eal 172 (623)
|+... +-..|.-+| ||.+=.||..+.-.+.+.+++..+..... +.-+..-| +..+. ..-++.-++..
T Consensus 23 lg~~~---~~d~Le~~g~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~-----gV~v~~GGTl~E~~~~qg~~~~yl~~~ 94 (251)
T 1qwg_A 23 LPPKF---VEDYLKVCGDYIDFVKFGWGTSAVIDRDVVKEKINYYKDW-----GIKVYPGGTLFEYAYSKGKFDEFLNEC 94 (251)
T ss_dssp CCHHH---HHHHHHHHGGGCSEEEECTTGGGGSCHHHHHHHHHHHHTT-----TCEEEECHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHH---HHHHHHHhhhhcceEEecCceeeecCHHHHHHHHHHHHHc-----CCeEECCcHHHHHHHHcCcHHHHHHHH
Confidence 55433 344455556 89999998755444445566555432111 11111111 00111 12344444555
Q ss_pred hcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE--c---ccCCCCCCHHHHHHHHHHHHHcC
Q 006969 173 KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF--S---PEDAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 173 ~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f--~---~eda~r~d~e~l~~~~~~~~~aG 247 (623)
+..|.+.|-+...+-+ ++.+ .-.+.|+.+++.|++ |-+ + ++.....+++.+.+.+++-.++|
T Consensus 95 k~lGf~~iEiS~G~i~--------l~~~----~~~~~I~~~~~~G~~-v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAG 161 (251)
T 1qwg_A 95 EKLGFEAVEISDGSSD--------ISLE----ERNNAIKRAKDNGFM-VLTEVGKKMPDKDKQLTIDDRIKLINFDLDAG 161 (251)
T ss_dssp HHHTCCEEEECCSSSC--------CCHH----HHHHHHHHHHHTTCE-EEEEECCSSHHHHTTCCHHHHHHHHHHHHHHT
T ss_pred HHcCCCEEEECCCccc--------CCHH----HHHHHHHHHHHCCCE-EeeeccccCCcccCCCCHHHHHHHHHHHHHCC
Confidence 5569999998766543 3433 345688999999985 533 2 32235689999999999999999
Q ss_pred CcEE-----------eecCcccccCHHHHHHHHHH
Q 006969 248 ATTL-----------NIPDTVGITMPTEFGKLIAD 271 (623)
Q Consensus 248 a~~I-----------~l~DTvG~~~P~~v~~li~~ 271 (623)
|+.| .|+|..|-.....+.+++..
T Consensus 162 A~~ViiEarEsG~~iGi~~~~g~~r~d~v~~i~~~ 196 (251)
T 1qwg_A 162 ADYVIIEGRESGKGKGLFDKEGKVKENELDVLAKN 196 (251)
T ss_dssp CSEEEECCTTTCCSSTTBCTTSCBCHHHHHHHHTT
T ss_pred CcEEEEeeecccCCcccCCCCCCCcHHHHHHHHHh
Confidence 9765 55667777777766555543
No 129
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=89.97 E-value=6.4 Score=40.38 Aligned_cols=134 Identities=13% Similarity=0.092 Sum_probs=86.0
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecC-CHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCe-EEEcc---cCCCCCCH-HHH
Q 006969 163 RDIKTAWEAVKYAKRPRIHTFIAT-SGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD-VEFSP---EDAGRSDR-KFL 236 (623)
Q Consensus 163 ~dI~~a~eal~~a~~~~v~i~~~~-Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~-V~f~~---eda~r~d~-e~l 236 (623)
..++.+++. |++.|.+.+-. ++ .+..+.++.+.++++.|++.|+.. ++..+ .-....++ +.+
T Consensus 112 ~~ve~a~~~----GAdaV~vlv~~~~d--------~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v 179 (304)
T 1to3_A 112 INAQAVKRD----GAKALKLLVLWRSD--------EDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAI 179 (304)
T ss_dssp CCHHHHHHT----TCCEEEEEEEECTT--------SCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHH
T ss_pred hhHHHHHHc----CCCEEEEEEEcCCC--------ccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHH
Confidence 445666554 88877643321 22 124677899999999999999862 22221 11122456 888
Q ss_pred HHHHHHHHHcCCcEEeecCc-ccccCHHHHHHHHHHHHHhCCCCccee-EEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 237 YEILGEVIKVGATTLNIPDT-VGITMPTEFGKLIADIKANTPGIENVV-ISTHCQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~DT-vG~~~P~~v~~li~~l~~~~~~~~~v~-i~~H~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
.+.++.+.+.|||.|.+.=+ .|...|+++.++++......+ +| |.+=.=.+.-.-..|.-.++++||+.|-+
T Consensus 180 ~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~----~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~v 253 (304)
T 1to3_A 180 IDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHIN----MPWVILSSGVDEKLFPRAVRVAMEAGASGFLA 253 (304)
T ss_dssp HHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCC----SCEEECCTTSCTTTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCC----CCeEEEecCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 88899999999999877653 233478888888888665433 23 32222123444567888889999987744
No 130
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=89.94 E-value=17 Score=37.27 Aligned_cols=197 Identities=16% Similarity=0.151 Sum_probs=114.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+-
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la~ 100 (318)
T 3qfe_A 28 TLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVG-------PDFPIMAGVGAHSTRQVLEHIN 100 (318)
T ss_dssp EECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHC-------TTSCEEEECCCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCCCHHHHHHHHH
Confidence 478888899999999999998776 3 455566665 55555555542 3457888877644444 44432
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccC---CCCCCHHHHHHHHHHHHHc
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED---AGRSDRKFLYEILGEVIKV 246 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ed---a~r~d~e~l~~~~~~~~~a 246 (623)
....+|++.+-+..|.. + +-..+.+++++-..+..+. .++..+-|+.-. +...+++.+.++++ .
T Consensus 101 -~a~~~Gadavlv~~P~y--~---~kp~~~~~l~~~f~~ia~a---~~lPiilYn~P~~t~g~~l~~~~~~~La~----~ 167 (318)
T 3qfe_A 101 -DASVAGANYVLVLPPAY--F---GKATTPPVIKSFFDDVSCQ---SPLPVVIYNFPGVCNGIDLDSDMITTIAR----K 167 (318)
T ss_dssp -HHHHHTCSEEEECCCCC--------CCCHHHHHHHHHHHHHH---CSSCEEEEECCC----CCCCHHHHHHHHH----H
T ss_pred -HHHHcCCCEEEEeCCcc--c---CCCCCHHHHHHHHHHHHhh---CCCCEEEEeCCcccCCCCCCHHHHHHHHh----h
Confidence 23445899887655532 0 0013566666655544443 345545564322 33456776666543 2
Q ss_pred CCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEE-eecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCccc
Q 006969 247 GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVIST-HCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNAS 325 (623)
Q Consensus 247 Ga~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~-H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~ 325 (623)
-...+.+.||.|- ..++.++++.+. ++ + +.+ -.++++ .+.++.+|++.+ +.| .+|.-
T Consensus 168 ~pnIvgiKdssgd--~~~~~~~~~~~~---~~--~--f~v~~G~d~~------~l~~l~~G~~G~---is~----~an~~ 225 (318)
T 3qfe_A 168 NPNVVGVKLTCAS--VGKITRLAATLP---PA--A--FSVFGGQSDF------LIGGLSVGSAGC---IAA----FANVF 225 (318)
T ss_dssp CTTEEEEEESSCC--HHHHHHHHHHSC---GG--G--CEEEESCGGG------HHHHHHTTCCEE---ECG----GGGTC
T ss_pred CCCEEEEEeCCCC--HHHHHHHHHhcC---CC--C--EEEEEecHHH------HHHHHHCCCCEE---Eec----HHHhh
Confidence 3479999999883 455555554332 11 1 222 334332 357788998754 333 46777
Q ss_pred HHHHHHHHHh
Q 006969 326 LEEVVMAFKC 335 (623)
Q Consensus 326 lEevv~~L~~ 335 (623)
.+.++...+.
T Consensus 226 P~~~~~l~~a 235 (318)
T 3qfe_A 226 PKTVSKIYEL 235 (318)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7766655553
No 131
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=89.90 E-value=15 Score=37.73 Aligned_cols=162 Identities=18% Similarity=0.095 Sum_probs=100.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChh-HH----HHHHHHHHHhccccccCCCccceEEeeccc-chhhHHHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DF----EAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWE 170 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d~----e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~e 170 (623)
..+.+.-..+.+.-.+++-..|=-.+|....- .. ..++.+++ . -+|...=+=-+ ..+.+..|++
T Consensus 24 v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~-~---------~VPValHlDHg~~~e~~~~ai~ 93 (305)
T 1rvg_A 24 VNNMEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKE-A---------RVPVAVHLDHGSSYESVLRALR 93 (305)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHH-C---------SSCEEEEEEEECSHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHh-C---------CCcEEEECCCCCCHHHHHHHHH
Confidence 45789999999999999999775544432110 11 22333333 1 13443333222 3344555554
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------cccCC--------CCCCHHHH
Q 006969 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDA--------GRSDRKFL 236 (623)
Q Consensus 171 al~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~~eda--------~r~d~e~l 236 (623)
+|...|-+ . .| ..+.|||++..++.+++|+..|+. |+- +-||. ..|||+.+
T Consensus 94 ----~GFtSVMi-D-gS--------~~p~eENi~~Tk~vv~~ah~~gvs-VEaELG~vgg~Ed~~~~~~~~~~yT~Peea 158 (305)
T 1rvg_A 94 ----AGFTSVMI-D-KS--------HEDFETNVRETRRVVEAAHAVGVT-VEAELGRLAGIEEHVAVDEKDALLTNPEEA 158 (305)
T ss_dssp ----TTCSEEEE-C-CT--------TSCHHHHHHHHHHHHHHHHHTTCE-EEEEESCCCCSCC------CCTTCCCHHHH
T ss_pred ----cCCCeeee-C-CC--------CCCHHHHHHHHHHHHHHHHHcCCE-EEEEEeeccCccCCccccccccccCCHHHH
Confidence 48887644 2 23 247899999999999999999974 542 22432 35999998
Q ss_pred HHHHHHHHHcCCcEEeec--CcccccC----HHHHHHHHHHHHHhCCCCcceeEEEeecC
Q 006969 237 YEILGEVIKVGATTLNIP--DTVGITM----PTEFGKLIADIKANTPGIENVVISTHCQN 290 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~--DTvG~~~----P~~v~~li~~l~~~~~~~~~v~i~~H~HN 290 (623)
.+++++ -|+|.+-++ -.=|... |.-=.++++.+++.+| +||-+|.=.
T Consensus 159 ~~Fv~~---TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~----vpLVlHGgS 211 (305)
T 1rvg_A 159 RIFMER---TGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVP----APLVLHGAS 211 (305)
T ss_dssp HHHHHH---HCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCC----SCEEECSCC
T ss_pred HHHHHH---HCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcC----CCEEEeCCC
Confidence 888865 488865554 3334333 3333467888888885 689988743
No 132
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=89.86 E-value=1.2 Score=46.06 Aligned_cols=107 Identities=13% Similarity=0.079 Sum_probs=82.6
Q ss_pred EcccC--CCCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHH
Q 006969 223 FSPED--AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTA 297 (623)
Q Consensus 223 f~~ed--a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvA 297 (623)
+.|.+ .+..|.+-+.++++.+++.|++.|.++-|+|= ++++|-.++++.+.+...+ +++|-+++-++.--++.
T Consensus 20 vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~g--rvpViaGvg~~t~~ai~ 97 (316)
T 3e96_A 20 ITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHG--RALVVAGIGYATSTAIE 97 (316)
T ss_dssp CCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECSSHHHHHH
T ss_pred eCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEEeCcCHHHHHH
Confidence 35654 36899999999999999999999999999985 5889999999999888765 46676676557888888
Q ss_pred HHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 298 NTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 298 NslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
.+..|-++||+.+=+..--+ -+ .+-++++..++.
T Consensus 98 la~~A~~~Gadavlv~~P~y-~~---~s~~~l~~~f~~ 131 (316)
T 3e96_A 98 LGNAAKAAGADAVMIHMPIH-PY---VTAGGVYAYFRD 131 (316)
T ss_dssp HHHHHHHHTCSEEEECCCCC-SC---CCHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEcCCCC-CC---CCHHHHHHHHHH
Confidence 88999999999987643322 11 356666665554
No 133
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=89.82 E-value=2.7 Score=43.08 Aligned_cols=109 Identities=21% Similarity=0.179 Sum_probs=74.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCccc-----------ccCHHHH
Q 006969 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEF 265 (623)
Q Consensus 197 ~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG-----------~~~P~~v 265 (623)
.|.+|++..+...++-. ... |..+.+.++-.+++.+.+.++.++++|+..|.|-|..+ .....+.
T Consensus 61 vt~~em~~~~~~I~~~~---~~P-viaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~ 136 (295)
T 1xg4_A 61 STLDDVLTDIRRITDVC---SLP-LLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEM 136 (295)
T ss_dssp SCHHHHHHHHHHHHHHC---CSC-EEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHH
T ss_pred CCHHHHHHHHHHHHhhC---CCC-EEecCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHH
Confidence 57888888777655543 344 77888666556899999999999999999999999974 3334556
Q ss_pred HHHHHHHHHhCCCCcceeEEEee----cCCcchHHHHHHHHHHhCCCEE
Q 006969 266 GKLIADIKANTPGIENVVISTHC----QNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 266 ~~li~~l~~~~~~~~~v~i~~H~----HND~GlAvANslaAv~aGA~~V 310 (623)
.+.|+.+++.-.+. +..|-.-+ .+.+--++.-+.+..+|||+.|
T Consensus 137 ~~~I~Aa~~a~~~~-~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i 184 (295)
T 1xg4_A 137 VDRIRAAVDAKTDP-DFVIMARTDALAVEGLDAAIERAQAYVEAGAEML 184 (295)
T ss_dssp HHHHHHHHHHCSST-TSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhccCC-CcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEE
Confidence 67777777654221 12333222 1122346777788888888876
No 134
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=89.78 E-value=1.4 Score=43.42 Aligned_cols=185 Identities=17% Similarity=0.125 Sum_probs=101.2
Q ss_pred HHHHHHHHHhHcCCCEEEEec------CCCChhHHHHHHHHHHHhccccccCCCccceEEeecccc-hhhHHHHHHHHhc
Q 006969 102 EKLDIARQLAKLGVDIIEAGF------PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-ERDIKTAWEAVKY 174 (623)
Q Consensus 102 ~Kl~Ia~~L~~~Gvd~IEvGf------P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~-~~dI~~a~eal~~ 174 (623)
.-.+.++.+.+.|+|.|+++. |..+. -.+.++.+.+.... +..+-|--.+ .+.++.+.++
T Consensus 18 ~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~-g~~~v~~lr~~~~~---------~~~vhlmv~dp~~~i~~~~~a--- 84 (230)
T 1tqj_A 18 RLGEEIKAVDEAGADWIHVDVMDGRFVPNITI-GPLIVDAIRPLTKK---------TLDVHLMIVEPEKYVEDFAKA--- 84 (230)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCB-CHHHHHHHGGGCCS---------EEEEEEESSSGGGTHHHHHHH---
T ss_pred HHHHHHHHHHHcCCCEEEEEEEecCCCcchhh-hHHHHHHHHhhcCC---------cEEEEEEccCHHHHHHHHHHc---
Confidence 345567788899999999974 32221 23566666653210 1111111122 2346777665
Q ss_pred CCCCEEEEEec--CCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEe
Q 006969 175 AKRPRIHTFIA--TSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLN 252 (623)
Q Consensus 175 a~~~~v~i~~~--~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~ 252 (623)
|++.|++-.- ..+ ...+.++.+++.|+. +.++.. ..++.+.+..++ .++|.|.
T Consensus 85 -Gadgv~vh~e~~~~~----------------~~~~~~~~i~~~g~~-~gv~~~--p~t~~e~~~~~~-----~~~D~v~ 139 (230)
T 1tqj_A 85 -GADIISVHVEHNASP----------------HLHRTLCQIRELGKK-AGAVLN--PSTPLDFLEYVL-----PVCDLIL 139 (230)
T ss_dssp -TCSEEEEECSTTTCT----------------THHHHHHHHHHTTCE-EEEEEC--TTCCGGGGTTTG-----GGCSEEE
T ss_pred -CCCEEEECcccccch----------------hHHHHHHHHHHcCCc-EEEEEe--CCCcHHHHHHHH-----hcCCEEE
Confidence 8999987654 332 233577888889975 554331 123333332222 3788773
Q ss_pred ec----CcccccCHHHHHHHHHHHHHhCC--CCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe--ccCCccCccCcc
Q 006969 253 IP----DTVGITMPTEFGKLIADIKANTP--GIENVVISTHCQNDLGLSTANTIAGACAGARQVEV--TINGIGERAGNA 324 (623)
Q Consensus 253 l~----DTvG~~~P~~v~~li~~l~~~~~--~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~--Tv~GlGERaGNa 324 (623)
+- -+-|...+....+.++.+++..+ +. +++|.+ |.|.-..|.-...++||+.+=+ .+. +..
T Consensus 140 ~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~-~~~I~v----~GGI~~~~~~~~~~aGad~vvvGSai~------~a~ 208 (230)
T 1tqj_A 140 IMSVNPGFGGQSFIPEVLPKIRALRQMCDERGL-DPWIEV----DGGLKPNNTWQVLEAGANAIVAGSAVF------NAP 208 (230)
T ss_dssp EESSCC----CCCCGGGHHHHHHHHHHHHHHTC-CCEEEE----ESSCCTTTTHHHHHHTCCEEEESHHHH------TSS
T ss_pred EEEeccccCCccCcHHHHHHHHHHHHHHHhcCC-CCcEEE----ECCcCHHHHHHHHHcCCCEEEECHHHH------CCC
Confidence 32 23343334455666666666542 00 245665 6788788888999999998632 122 223
Q ss_pred cHHHHHHHHHh
Q 006969 325 SLEEVVMAFKC 335 (623)
Q Consensus 325 ~lEevv~~L~~ 335 (623)
+.++.+..|+.
T Consensus 209 d~~~~~~~l~~ 219 (230)
T 1tqj_A 209 NYAEAIAGVRN 219 (230)
T ss_dssp CHHHHHHHHHT
T ss_pred CHHHHHHHHHH
Confidence 45666666653
No 135
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=89.77 E-value=1.5 Score=42.07 Aligned_cols=172 Identities=13% Similarity=0.045 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHhHcCCCEEEEec-CCC----ChhHHHHHHHHHHHhccccccCCCccceEEeec-ccchhhHHHHHHHHh
Q 006969 100 SKEKLDIARQLAKLGVDIIEAGF-PAA----SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS-RCNERDIKTAWEAVK 173 (623)
Q Consensus 100 ~e~Kl~Ia~~L~~~Gvd~IEvGf-P~~----s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~-r~~~~dI~~a~eal~ 173 (623)
..+-.+.++.+.++|++++++.. .+. -..-.+.++.|.+..+ . +....+. +-..+.++.+.++
T Consensus 15 ~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~--------~-~~~v~l~v~d~~~~i~~~~~~-- 83 (220)
T 2fli_A 15 YANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSK--------L-VFDCHLMVVDPERYVEAFAQA-- 83 (220)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCC--------S-EEEEEEESSSGGGGHHHHHHH--
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCC--------C-CEEEEEeecCHHHHHHHHHHc--
Confidence 34556778888999999988864 222 1111567777765421 1 2233332 3223356666655
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 006969 174 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 253 (623)
Q Consensus 174 ~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l 253 (623)
|++.|++-....+ ...+.++.+++.|.. +.++. +. .++.+.+.++ ..+++.|.+
T Consensus 84 --gad~v~vh~~~~~----------------~~~~~~~~~~~~g~~-i~~~~-~~-~t~~e~~~~~-----~~~~d~vl~ 137 (220)
T 2fli_A 84 --GADIMTIHTESTR----------------HIHGALQKIKAAGMK-AGVVI-NP-GTPATALEPL-----LDLVDQVLI 137 (220)
T ss_dssp --TCSEEEEEGGGCS----------------CHHHHHHHHHHTTSE-EEEEE-CT-TSCGGGGGGG-----TTTCSEEEE
T ss_pred --CCCEEEEccCccc----------------cHHHHHHHHHHcCCc-EEEEE-cC-CCCHHHHHHH-----HhhCCEEEE
Confidence 8999876543321 123455666777764 55443 11 2343433222 245787643
Q ss_pred cCcc-----cccCHHHHHHHHHHHHHhCCCC-cceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 006969 254 PDTV-----GITMPTEFGKLIADIKANTPGI-ENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (623)
Q Consensus 254 ~DTv-----G~~~P~~v~~li~~l~~~~~~~-~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 313 (623)
||+ |...+....+.++.+++..+.. .++++.+ +-|....|.-.++++||+.|.+.
T Consensus 138 -~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v----~GGI~~~~~~~~~~~Gad~vvvG 198 (220)
T 2fli_A 138 -MTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEV----DGGVDNKTIRACYEAGANVFVAG 198 (220)
T ss_dssp -ESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEE----ESSCCTTTHHHHHHHTCCEEEES
T ss_pred -EEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEE----ECcCCHHHHHHHHHcCCCEEEEC
Confidence 333 3222333333444454432100 0134433 35555578888889999998653
No 136
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=89.77 E-value=1.1 Score=46.14 Aligned_cols=109 Identities=15% Similarity=0.092 Sum_probs=83.7
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEe-ecCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvAN 298 (623)
.|.+ .+..|.+-+.++++.+++.|++.|.++=|+| .++++|-.++++.+.+...+ ++++-+| .+|+.--++.-
T Consensus 18 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~l 95 (309)
T 3fkr_A 18 TTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAG--RVPVIVTTSHYSTQVCAAR 95 (309)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHH
T ss_pred CCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEecCCchHHHHHHH
Confidence 4443 3578999999999999999999999999999 46899999999999887755 4677777 57999999999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+..|-++||+.+=..--=++-. --.+-++++..++.
T Consensus 96 a~~A~~~Gadavlv~~Pyy~~~-~~~s~~~l~~~f~~ 131 (309)
T 3fkr_A 96 SLRAQQLGAAMVMAMPPYHGAT-FRVPEAQIFEFYAR 131 (309)
T ss_dssp HHHHHHTTCSEEEECCSCBTTT-BCCCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCCCccC-CCCCHHHHHHHHHH
Confidence 9999999999987654322100 01345666655543
No 137
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=89.72 E-value=19 Score=36.50 Aligned_cols=194 Identities=12% Similarity=0.166 Sum_probs=118.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+-
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la~ 89 (294)
T 2ehh_A 17 EVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAA-------GRIKVIAGTGGNATHEAVHLTA 89 (294)
T ss_dssp EECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEECCCSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHHH
Confidence 367788889999999999999877 3 455666665 55555555542 3357888887655444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~aG 247 (623)
. ...+|++.+-+..|-. .+.|.++.++-..+..+ ..++..+-|+ |. .+...+++.+.++++ + -
T Consensus 90 ~-A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~---a~~lPiilYn~P~~tg~~l~~~~~~~La~---~-~ 154 (294)
T 2ehh_A 90 H-AKEVGADGALVVVPYY-------NKPTQRGLYEHFKTVAQ---EVDIPIIIYNIPSRTCVEISVDTMFKLAS---E-C 154 (294)
T ss_dssp H-HHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHH---HCCSCEEEEECHHHHSCCCCHHHHHHHHH---H-C
T ss_pred H-HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCCcccCcCCCHHHHHHHHh---h-C
Confidence 3 3557999887765532 24577776665554443 2355545554 32 234567887777763 2 2
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|- ..++.++++.. ++ +..+ +-.+++ ..+.++..|++.+ +.| .+|...+
T Consensus 155 pnivgiKds~gd--~~~~~~~~~~~----~~--~f~v-~~G~d~------~~~~~l~~G~~G~---is~----~an~~P~ 212 (294)
T 2ehh_A 155 ENIVASKESTPN--MDRISEIVKRL----GE--SFSV-LSGDDS------LTLPMMALGAKGV---ISV----ANNVMPR 212 (294)
T ss_dssp TTEEEEEECCSC--HHHHHHHHHHH----CT--TSEE-EESSGG------GHHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEeCCCC--HHHHHHHHHhc----CC--CeEE-EECcHH------HHHHHHHCCCCEE---EeC----HHHhhHH
Confidence 579999999985 45555555443 21 1222 334443 3556778898653 333 4577777
Q ss_pred HHHHHHH
Q 006969 328 EVVMAFK 334 (623)
Q Consensus 328 evv~~L~ 334 (623)
.++...+
T Consensus 213 ~~~~l~~ 219 (294)
T 2ehh_A 213 EVKELIR 219 (294)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665544
No 138
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=89.65 E-value=1.7 Score=44.33 Aligned_cols=106 Identities=16% Similarity=0.146 Sum_probs=81.5
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEe-ecCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvAN 298 (623)
.|.+ .+..|.+-+.++++.+++.|++.|.++-|+|= ++++|-.++++.+.+...+ ++++-+| ++|+.--++..
T Consensus 13 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~l 90 (294)
T 3b4u_A 13 TPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIA--PSRIVTGVLVDSIEDAADQ 90 (294)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCC--GGGEEEEECCSSHHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCccHHHHHHH
Confidence 4432 35789999999999999999999999999985 7899999999999988765 3555554 47788889999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
+..|-++||+.+=..---+-. +.+-++++..++
T Consensus 91 a~~A~~~Gadavlv~~P~y~~---~~s~~~l~~~f~ 123 (294)
T 3b4u_A 91 SAEALNAGARNILLAPPSYFK---NVSDDGLFAWFS 123 (294)
T ss_dssp HHHHHHTTCSEEEECCCCSSC---SCCHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEcCCcCCC---CCCHHHHHHHHH
Confidence 999999999998766443321 124455554443
No 139
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=89.53 E-value=2.5 Score=42.49 Aligned_cols=107 Identities=16% Similarity=0.191 Sum_probs=69.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCccc-----ccCHHHHHHHHH
Q 006969 196 RKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----ITMPTEFGKLIA 270 (623)
Q Consensus 196 ~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG-----~~~P~~v~~li~ 270 (623)
..|.+|++..+...++-.. .. |..+.+.++..++ .+.+++++++|+..|.|-|.++ ...++++.+.|+
T Consensus 62 ~vt~~em~~~~~~I~r~~~---~p-viaD~~~Gyg~~~---~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~ 134 (255)
T 2qiw_A 62 NMNFADYMAVVKKITSAVS---IP-VSVDVESGYGLSP---ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIA 134 (255)
T ss_dssp CSCHHHHHHHHHHHHHHCS---SC-EEEECTTCTTCCH---HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhcCC---CC-EEeccCCCcCcHH---HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHH
Confidence 3578888887776555442 43 7888877766666 7888899999999999999972 345578888998
Q ss_pred HHHHhCCCCcceeEEEeecCCc------------chHHHHHHHHHHhCCCEE
Q 006969 271 DIKANTPGIENVVISTHCQNDL------------GLSTANTIAGACAGARQV 310 (623)
Q Consensus 271 ~l~~~~~~~~~v~i~~H~HND~------------GlAvANslaAv~aGA~~V 310 (623)
.+++.-... .+++-+=.|-|. --++.-+.+-.+|||+.|
T Consensus 135 a~~~a~~~~-g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i 185 (255)
T 2qiw_A 135 AARQAADVA-GVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSV 185 (255)
T ss_dssp HHHHHHHHH-TCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHhc-CCCeEEEEEechhhccCCcchHHHHHHHHHHHHHHHcCCcEE
Confidence 888762100 023333444443 224445555556666654
No 140
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=89.51 E-value=4.9 Score=39.85 Aligned_cols=114 Identities=12% Similarity=-0.006 Sum_probs=68.9
Q ss_pred HHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCc-------------------ccccCHHHHHHH
Q 006969 208 SMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDT-------------------VGITMPTEFGKL 268 (623)
Q Consensus 208 ~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DT-------------------vG~~~P~~v~~l 268 (623)
+..+.+|+.|.+.+..... .+..+.+...+.++++.++|+|.|-|... .+.+++....++
T Consensus 7 ~~~~~~~~~~~~~~~~~i~-~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~ 85 (262)
T 1rd5_A 7 DTMAALMAKGKTAFIPYIT-AGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEM 85 (262)
T ss_dssp HHHHHHHHTTCCEEEEEEE-TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred HHHHHHHhcCCceEEEEee-CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHH
Confidence 3444555555442222221 33445688899999999999998888532 244688889999
Q ss_pred HHHHHHhCCCCcceeEEEeecCC----cchHHHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcc
Q 006969 269 IADIKANTPGIENVVISTHCQND----LGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 269 i~~l~~~~~~~~~v~i~~H~HND----~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
++.+++.+ ++|+.+=...+ .|+ ..+.++||+.|...-..+ ..+++++..++.++
T Consensus 86 i~~ir~~~----~~Pv~~m~~~~~~~~~~~-----~~a~~aGadgv~v~d~~~------~~~~~~~~~~~~~g 143 (262)
T 1rd5_A 86 LREVTPEL----SCPVVLLSYYKPIMFRSL-----AKMKEAGVHGLIVPDLPY------VAAHSLWSEAKNNN 143 (262)
T ss_dssp HHHHGGGC----SSCEEEECCSHHHHSCCT-----HHHHHTTCCEEECTTCBT------TTHHHHHHHHHHTT
T ss_pred HHHHHhcC----CCCEEEEecCcHHHHHHH-----HHHHHcCCCEEEEcCCCh------hhHHHHHHHHHHcC
Confidence 99999874 24543311111 122 128899999987643322 23556666655543
No 141
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=89.47 E-value=16 Score=35.66 Aligned_cols=160 Identities=16% Similarity=0.049 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeec----------ccchhhHHHH
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS----------RCNERDIKTA 168 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~----------r~~~~dI~~a 168 (623)
+.++-.++++...+.|..-|++|. ++ .++.+++.+.. |.+..+- -...++++.+
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~~~----~~---~i~~ir~~v~~---------Pvig~~k~~~~~~~~~I~~~~~~i~~~ 97 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRIEG----IE---NLRTVRPHLSV---------PIIGIIKRDLTGSPVRITPYLQDVDAL 97 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEES----HH---HHHHHGGGCCS---------CEEEECBCCCSSCCCCBSCSHHHHHHH
T ss_pred CcchHHHHHHHHHHCCCcEEEECC----HH---HHHHHHHhcCC---------CEEEEEeecCCCCceEeCccHHHHHHH
Confidence 578899999999999999999963 33 45555554311 3221111 1123455555
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCC
Q 006969 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGA 248 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa 248 (623)
+++ |++.|.+-... ..++ +.+.+.+++++++|+. +..+. .+++ .++.+.++|+
T Consensus 98 ~~a----Gad~I~l~~~~---------~~~p----~~l~~~i~~~~~~g~~-v~~~v-----~t~e----ea~~a~~~Ga 150 (229)
T 3q58_A 98 AQA----GADIIAFDASF---------RSRP----VDIDSLLTRIRLHGLL-AMADC-----STVN----EGISCHQKGI 150 (229)
T ss_dssp HHH----TCSEEEEECCS---------SCCS----SCHHHHHHHHHHTTCE-EEEEC-----SSHH----HHHHHHHTTC
T ss_pred HHc----CCCEEEECccc---------cCCh----HHHHHHHHHHHHCCCE-EEEec-----CCHH----HHHHHHhCCC
Confidence 554 99988553322 0111 2345677888888874 44333 3333 4566778999
Q ss_pred cEEee--cC-ccc--ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEEEe
Q 006969 249 TTLNI--PD-TVG--ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEV 312 (623)
Q Consensus 249 ~~I~l--~D-TvG--~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~Vd~ 312 (623)
+.|.+ -+ |.+ ...|. .++++.+++. + +|+-.= -|.. ..+...++++||+.|-+
T Consensus 151 d~Ig~~~~g~t~~~~~~~~~--~~li~~l~~~--~---ipvIA~----GGI~t~~d~~~~~~~GadgV~V 209 (229)
T 3q58_A 151 EFIGTTLSGYTGPITPVEPD--LAMVTQLSHA--G---CRVIAE----GRYNTPALAANAIEHGAWAVTV 209 (229)
T ss_dssp SEEECTTTTSSSSCCCSSCC--HHHHHHHHTT--T---CCEEEE----SSCCSHHHHHHHHHTTCSEEEE
T ss_pred CEEEecCccCCCCCcCCCCC--HHHHHHHHHc--C---CCEEEE----CCCCCHHHHHHHHHcCCCEEEE
Confidence 99943 21 111 11221 2566666653 2 333322 3443 57778888899998743
No 142
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=89.44 E-value=1.3 Score=45.09 Aligned_cols=100 Identities=13% Similarity=0.116 Sum_probs=81.3
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHHHh
Q 006969 230 RSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGACA 305 (623)
Q Consensus 230 r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvANslaAv~a 305 (623)
..|.+-+.++++.+++.|++.|.++=|+|= ++.+|-.++++.+.+...+ ++++-+|+ +|+.--++..+..|-++
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~a~~~ 96 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDK--RVPVIAGTGTNDTEKSIQASIQAKAL 96 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC--CCcEEEeCCcccHHHHHHHHHHHHHc
Confidence 789999999999999999999999999985 5789999999999887654 46777777 79999999999999999
Q ss_pred CCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 306 GARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 306 GA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
||+.+=..---+-. .+-++++..++.
T Consensus 97 Gadavlv~~P~y~~----~~~~~l~~~f~~ 122 (292)
T 3daq_A 97 GADAIMLITPYYNK----TNQRGLVKHFEA 122 (292)
T ss_dssp TCSEEEEECCCSSC----CCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCC----CCHHHHHHHHHH
Confidence 99998776543332 345666665543
No 143
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=89.41 E-value=5.3 Score=38.87 Aligned_cols=201 Identities=12% Similarity=0.136 Sum_probs=103.3
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEec--CC---CChhHHHHHHHHHHHhccccccCCCccc-eEEeeccc---c---hhhH
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGF--PA---ASKEDFEAVRTIAKEVGNAVDAESGYVP-VICGLSRC---N---ERDI 165 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGf--P~---~s~~d~e~v~~i~~~~~~~~~~~~~l~~-~i~~~~r~---~---~~dI 165 (623)
++.++.+ +.+.++|++.||+.. |. ....+.+.++++.+.. ++.. .+.+.... . .+.+
T Consensus 19 ~~~~~~l---~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~--------gl~~~~~~~~~~~~~~~~~~~~~~ 87 (272)
T 2q02_A 19 LSIEAFF---RLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKY--------GLEIVTINAVYPFNQLTEEVVKKT 87 (272)
T ss_dssp SCHHHHH---HHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHT--------TCEEEEEEEETTTTSCCHHHHHHH
T ss_pred CCHHHHH---HHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHc--------CCeEEechhhhccCCcHHHHHHHH
Confidence 4565554 455678999999963 31 1223456666665543 2311 23221111 1 2334
Q ss_pred HHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHH-HHHHHHHHHHHHHcCCCeEEEcccC---CCCCCHHHHHHHHH
Q 006969 166 KTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQV-VEIARSMVKFARSLGCDDVEFSPED---AGRSDRKFLYEILG 241 (623)
Q Consensus 166 ~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~-l~~~~~~v~~ak~~G~~~V~f~~ed---a~r~d~e~l~~~~~ 241 (623)
+++++..+..|.+.|.++..... ....+.. .+.+.++.++|++.|+. +.+-+.. ..-.+++.+.++++
T Consensus 88 ~~~i~~a~~lG~~~v~~~~g~~~-------~~~~~~~~~~~l~~l~~~a~~~gv~-l~~E~~~~~~~~~~~~~~~~~l~~ 159 (272)
T 2q02_A 88 EGLLRDAQGVGARALVLCPLNDG-------TIVPPEVTVEAIKRLSDLFARYDIQ-GLVEPLGFRVSSLRSAVWAQQLIR 159 (272)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSS-------BCCCHHHHHHHHHHHHHHHHTTTCE-EEECCCCSTTCSCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEccCCCc-------hhHHHHHHHHHHHHHHHHHHHcCCE-EEEEecCCCcccccCHHHHHHHHH
Confidence 55555555568888776432211 0344566 77788888899999874 5553321 22346777777776
Q ss_pred HHHHcCCcEEeec-CcccccC--HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCcc
Q 006969 242 EVIKVGATTLNIP-DTVGITM--PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (623)
Q Consensus 242 ~~~~aGa~~I~l~-DTvG~~~--P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlG 318 (623)
.+ + ..+.++ ||.=... -.+ .+.+..++ . +-...+|.||..+.. .+...-+.-..-+|
T Consensus 160 ~v---~-~~~g~~~D~~h~~~~~~~~-~~~~~~l~---~---~~i~~vH~~D~~~~~---------~~~~~~~~~~~~~G 219 (272)
T 2q02_A 160 EA---G-SPFKVLLDTFHHHLYEEAE-KEFASRID---I---SAIGLVHLSGVEDTR---------PTEALADEQRIMLS 219 (272)
T ss_dssp HH---T-CCCEEEEEHHHHHHCTTHH-HHHHHHCC---G---GGEEEEEECBCCCCS---------CGGGCCGGGCBCCC
T ss_pred Hh---C-cCeEEEEEchHhhccCCCc-hhhhhhCC---H---hHEEEEEeCCCcCCC---------CchhccccccccCC
Confidence 65 3 333322 6532222 011 13333332 1 235688888764311 00000000111123
Q ss_pred CccCcccHHHHHHHHHhccc
Q 006969 319 ERAGNASLEEVVMAFKCRGE 338 (623)
Q Consensus 319 ERaGNa~lEevv~~L~~~~~ 338 (623)
++ |+.+..+++..|+..+.
T Consensus 220 ~G-~~id~~~~~~~L~~~gy 238 (272)
T 2q02_A 220 EK-DVMQNYQQVQRLENMGY 238 (272)
T ss_dssp TT-CSSCHHHHHHHHHHTTC
T ss_pred CC-CcccHHHHHHHHHhcCC
Confidence 31 36899999999998653
No 144
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=89.36 E-value=4.5 Score=43.03 Aligned_cols=179 Identities=15% Similarity=0.129 Sum_probs=107.1
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEec--CCCChhH-----HHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHH
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGF--PAASKED-----FEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEA 171 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGf--P~~s~~d-----~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~ea 171 (623)
+.+.-+++++.+.++|++.|=.+. |..+|.. .+..+.+.+..... |+ |.++. --....++...
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~-----Gl-~~~te--~~d~~~~~~l~-- 223 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY-----GL-GVISE--IVTPADIEVAL-- 223 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH-----TC-EEEEE--CCSGGGHHHHT--
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc-----CC-EEEEe--cCCHHHHHHHH--
Confidence 899999999999999999998873 5444431 23344443322111 22 22221 12344454432
Q ss_pred HhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEE
Q 006969 172 VKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL 251 (623)
Q Consensus 172 l~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I 251 (623)
.. ++.+.|- ..+. + + .+.++++.+.|.. |.++- +...+++.+...++.+.+.|...|
T Consensus 224 --~~-vd~lkIg--s~~~--------~---n----~~LL~~~a~~gkP-Vilk~--G~~~t~~e~~~Ave~i~~~Gn~~i 280 (385)
T 3nvt_A 224 --DY-VDVIQIG--ARNM--------Q---N----FELLKAAGRVDKP-ILLKR--GLSATIEEFIGAAEYIMSQGNGKI 280 (385)
T ss_dssp --TT-CSEEEEC--GGGT--------T---C----HHHHHHHHTSSSC-EEEEC--CTTCCHHHHHHHHHHHHTTTCCCE
T ss_pred --hh-CCEEEEC--cccc--------c---C----HHHHHHHHccCCc-EEEec--CCCCCHHHHHHHHHHHHHcCCCeE
Confidence 23 5666553 3221 1 1 1456667778876 77753 334788888899999999998878
Q ss_pred eecCc--ccccC-HHHHHH--HHHHHHHhCCCCcceeEEEeecC--CcchHHHHHHHHHHhCCC--EEEec
Q 006969 252 NIPDT--VGITM-PTEFGK--LIADIKANTPGIENVVISTHCQN--DLGLSTANTIAGACAGAR--QVEVT 313 (623)
Q Consensus 252 ~l~DT--vG~~~-P~~v~~--li~~l~~~~~~~~~v~i~~H~HN--D~GlAvANslaAv~aGA~--~Vd~T 313 (623)
.||.- ..+-+ |...-+ .|..+++.+. .+ + ++=|.|. +..+-..-+++|+.+||+ .|+.=
T Consensus 281 ~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~-lp-V-~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H 348 (385)
T 3nvt_A 281 ILCERGIRTYEKATRNTLDISAVPILKKETH-LP-V-MVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVH 348 (385)
T ss_dssp EEEECCBCCSCCSSSSBCCTTHHHHHHHHBS-SC-E-EEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBC
T ss_pred EEEECCCCCCCCCCccccCHHHHHHHHHhcC-CC-E-EEcCCCCCCccchHHHHHHHHHHhCCCEEEEEec
Confidence 88774 33322 222112 2556777542 11 4 5667774 345656789999999999 78763
No 145
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=89.35 E-value=1.6 Score=46.05 Aligned_cols=116 Identities=19% Similarity=0.175 Sum_probs=88.0
Q ss_pred HHcCCCeEEEcccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-
Q 006969 214 RSLGCDDVEFSPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC- 288 (623)
Q Consensus 214 k~~G~~~V~f~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~- 288 (623)
+-.|+-...+.|.+ .++.|.+-+.++++.+++.|++.|.++=|+| .++++|-.++++.+.+...+ ++++-+++
T Consensus 59 ~~~Gi~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg 136 (360)
T 4dpp_A 59 KALRVITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGG--SIKVIGNTG 136 (360)
T ss_dssp HTCCEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECC
T ss_pred ccCCeEEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCC--CCeEEEecC
Confidence 44454212235653 4578999999999999999999999999999 56899999999999887765 46676665
Q ss_pred cCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 289 QNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 289 HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+|+.--++..+..|-++||+.+=..---+. + .+-++++..++.
T Consensus 137 ~~st~eai~la~~A~~~Gadavlvv~PyY~-k---~sq~gl~~hf~~ 179 (360)
T 4dpp_A 137 SNSTREAIHATEQGFAVGMHAALHINPYYG-K---TSIEGLIAHFQS 179 (360)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEECCCSS-C---CCHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCC-C---CCHHHHHHHHHH
Confidence 688999999999999999999866543222 2 456677766654
No 146
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=89.34 E-value=1.1 Score=44.49 Aligned_cols=163 Identities=23% Similarity=0.232 Sum_probs=107.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhcc----ccc------------------------cCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGN----AVD------------------------AES 148 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~----~~~------------------------~~~ 148 (623)
.-|.|+-++-.+...+.....+-+|-.+-.|..|..+-.|+..... ++. ...
T Consensus 69 y~tve~AV~~mk~y~~~~~~avSVGLGaGDP~Q~~~Va~IA~~~~P~HVNQVFtgag~trg~L~~~~T~VNaLVSPTG~~ 148 (275)
T 3m6y_A 69 YPTVEEAVTAMKAYGKEIDDAVSIGLGAGDNRQAAVVAEIAKHYPGSHINQVFPSVGATRANLGEKDSWINSLVSPTGKV 148 (275)
T ss_dssp SSSHHHHHHHHHHHHHHTTTCEEEECCTTCGGGHHHHHHHTTTCCCSEECCBGGGHHHHHHHHTTCCCEEEEEEBCCSST
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHhcCCCcccccccchHHHHhhcCCCccEEEEEEcCCCCc
Confidence 3478888999999888887779999877778888888777653211 000 001
Q ss_pred CccceEEe-ecccch----hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE
Q 006969 149 GYVPVICG-LSRCNE----RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF 223 (623)
Q Consensus 149 ~l~~~i~~-~~r~~~----~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f 223 (623)
|++-.-.| ++++.. -.++.|+..+++.|.+.|.+|- .- |. ..++.++.+++.|.+.|+ .+
T Consensus 149 G~VkISTGp~Sas~~~~~~V~vetAiaml~dmG~~SvKffP-M~--------Gl---~~leEl~avAkAca~~g~---~l 213 (275)
T 3m6y_A 149 GYVNISTGPISAAGEEKAIVPIKTAIALVRDMGGNSLKYFP-MK--------GL---AHEEEYRAVAKACAEEGF---AL 213 (275)
T ss_dssp TEEECCCSTTGGGSSSCCEEEHHHHHHHHHHHTCCEEEECC-CT--------TT---TTHHHHHHHHHHHHHHTC---EE
T ss_pred ceEEeccCCCccccCCCceeeHHHHHHHHHHcCCCeeeEee-cC--------Cc---ccHHHHHHHHHHHHHcCc---eE
Confidence 11100001 110111 1468888889999999998762 11 11 123445556666677775 23
Q ss_pred cccCCCCCCHHHHHHHHHHHHHcCCcEEe-------ecCcccccCHHHHHHHHHHHHHhC
Q 006969 224 SPEDAGRSDRKFLYEILGEVIKVGATTLN-------IPDTVGITMPTEFGKLIADIKANT 276 (623)
Q Consensus 224 ~~eda~r~d~e~l~~~~~~~~~aGa~~I~-------l~DTvG~~~P~~v~~li~~l~~~~ 276 (623)
-| .+..|.+-+.++++.+.++|+..|. |=-..|...|+++.+++..+++.+
T Consensus 214 EP--TGGIdl~Nf~~I~~i~l~aGv~~viPHIYsSIIDk~TG~TrpedV~~ll~~~K~l~ 271 (275)
T 3m6y_A 214 EP--TGGIDKENFETIVRIALEANVEQVIPHVYSSIIDKETGNTKVEAVRELLAVVKKLV 271 (275)
T ss_dssp EE--BSSCCTTTHHHHHHHHHHTTCSCBCCEECGGGBCTTTCCBCHHHHHHHHHHHHHHH
T ss_pred CC--CCCccHhHHHHHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHHHH
Confidence 34 6678888999999999999986442 224689999999999999998865
No 147
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=89.29 E-value=1.2 Score=45.52 Aligned_cols=82 Identities=17% Similarity=0.155 Sum_probs=54.3
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeecC-c-c-c---ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHH
Q 006969 227 DAGRS-DRKFLYEILGEVIKVGATTLNIPD-T-V-G---ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 299 (623)
Q Consensus 227 da~r~-d~e~l~~~~~~~~~aGa~~I~l~D-T-v-G---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANs 299 (623)
|+++. +++.+++.++..++.||+.|-+.= + - | ....+|+.+++..++..... +++|++++.+ -.-+
T Consensus 21 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSIDT~~-----~~va 93 (280)
T 1eye_A 21 DGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITVSIDTMR-----ADVA 93 (280)
T ss_dssp SSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT--TCCEEEECSC-----HHHH
T ss_pred CCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEEeCCC-----HHHH
Confidence 56654 799999999999999999988872 1 1 1 22346676666555443211 3789999887 4556
Q ss_pred HHHHHhCCCEEEeccC
Q 006969 300 IAGACAGARQVEVTIN 315 (623)
Q Consensus 300 laAv~aGA~~Vd~Tv~ 315 (623)
.+|+++||+.|+-.-.
T Consensus 94 ~aAl~aGa~iINdvsg 109 (280)
T 1eye_A 94 RAALQNGAQMVNDVSG 109 (280)
T ss_dssp HHHHHTTCCEEEETTT
T ss_pred HHHHHcCCCEEEECCC
Confidence 7899999999965433
No 148
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=89.23 E-value=7.7 Score=40.17 Aligned_cols=161 Identities=16% Similarity=0.159 Sum_probs=78.5
Q ss_pred eEEEeCCC---cccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEec----CC--CC-hhHHHHHHHHHHHhccccccCCC
Q 006969 80 VRVFDTTL---RDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PA--AS-KEDFEAVRTIAKEVGNAVDAESG 149 (623)
Q Consensus 80 v~I~DtTL---RDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGf----P~--~s-~~d~e~v~~i~~~~~~~~~~~~~ 149 (623)
+-|+.+|. =||.+ .++.+.-++.++.+.+.|.|+|++|. |+ .+ ++|.+.+..+.+.+..... +
T Consensus 45 MGIlNvTPDSFsdgg~----~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~---~ 117 (318)
T 2vp8_A 45 MAIVNRTPDSFYDKGA----TFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYP---D 117 (318)
T ss_dssp EEEEC------------------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHST---T
T ss_pred EEEEeCCCCcccCCCc----cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCC---C
Confidence 45666665 45554 46789999999999999999999996 44 22 2334333222222211100 0
Q ss_pred ccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC
Q 006969 150 YVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (623)
Q Consensus 150 l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~ 229 (623)
. | |+ .--.+.+-+++|+++ |.+.|. .+|-. . + .++++.++++|+. |+.....+.
T Consensus 118 v-p-IS-IDT~~~~VaeaAl~a----Ga~iIN---DVsg~--------~-d------~~m~~vaa~~g~~-vVlmh~~G~ 171 (318)
T 2vp8_A 118 Q-L-IS-VDTWRAQVAKAACAA----GADLIN---DTWGG--------V-D------PAMPEVAAEFGAG-LVCAHTGGA 171 (318)
T ss_dssp C-E-EE-EECSCHHHHHHHHHH----TCCEEE---ETTSS--------S-S------TTHHHHHHHHTCE-EEEECC---
T ss_pred C-e-EE-EeCCCHHHHHHHHHh----CCCEEE---ECCCC--------C-c------hHHHHHHHHhCCC-EEEECCCCC
Confidence 1 1 22 222356667777776 777554 44421 1 1 1455666777875 444332211
Q ss_pred --C-----CC------------HHHHHHHHHHHHHcCCc--EEeecCc-cccc-CHHHHHHHHHHHHH
Q 006969 230 --R-----SD------------RKFLYEILGEVIKVGAT--TLNIPDT-VGIT-MPTEFGKLIADIKA 274 (623)
Q Consensus 230 --r-----~d------------~e~l~~~~~~~~~aGa~--~I~l~DT-vG~~-~P~~v~~li~~l~~ 274 (623)
+ .+ .+|+.+.++.+.++|.. .|.| |- +|.. +.++-.++++.+.+
T Consensus 172 ~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~Iil-DPG~GF~Kt~~~nl~ll~~l~~ 238 (318)
T 2vp8_A 172 LPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLI-DPAHDFGKNTFHGLLLLRHVAD 238 (318)
T ss_dssp ----------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ETTTTCCTTSHHHHHHHHTHHH
T ss_pred CccccccccccccccccHHHHHHHHHHHHHHHHHHcCCChhhEEE-cCCCCcccCHHHHHHHHHHHHH
Confidence 1 11 16777788888899985 3443 32 2222 34455555555543
No 149
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=89.20 E-value=1.8 Score=44.43 Aligned_cols=106 Identities=21% Similarity=0.205 Sum_probs=82.1
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEe-ecCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvAN 298 (623)
.|.+ .+..|.+-+.++++.+++.|++.|.++=|+| .++++|-.++++.+.+...+ ++++-++ .+|+.--++..
T Consensus 26 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~st~~ai~l 103 (304)
T 3cpr_A 26 TPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGD--RAKLIAGVGTNNTRTSVEL 103 (304)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSCHHHHHHH
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEecCCCCCHHHHHHH
Confidence 5543 3578999999999999999999999999988 56899999999999887665 3555555 47888899999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+..|-++||+.+=..---+-. .+-++++..++.
T Consensus 104 a~~A~~~Gadavlv~~P~y~~----~~~~~l~~~f~~ 136 (304)
T 3cpr_A 104 AEAAASAGADGLLVVTPYYSK----PSQEGLLAHFGA 136 (304)
T ss_dssp HHHHHHTTCSEEEEECCCSSC----CCHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCCC----CCHHHHHHHHHH
Confidence 999999999998765543322 245566655543
No 150
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=89.18 E-value=1.5 Score=43.04 Aligned_cols=169 Identities=17% Similarity=0.168 Sum_probs=88.9
Q ss_pred HHHHHHHHHhHcCCCEEEE----ecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCC
Q 006969 102 EKLDIARQLAKLGVDIIEA----GFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (623)
Q Consensus 102 ~Kl~Ia~~L~~~Gvd~IEv----GfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~ 177 (623)
+-+++++.+.+.|++.|.+ |........ +.++.+++... .|.+....-..+++++.+++ +|+
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~---------ipv~v~ggI~~~~~~~~~l~----~Ga 98 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAMD---------IKVELSGGIRDDDTLAAALA----TGC 98 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHCS---------SEEEEESSCCSHHHHHHHHH----TTC
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhcC---------CcEEEECCcCCHHHHHHHHH----cCC
Confidence 5678899999999999998 221122334 67888877531 14444333234566776665 488
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC-eEEEcccC------CC-CCCHHHHHHHHHHHHHcCCc
Q 006969 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD-DVEFSPED------AG-RSDRKFLYEILGEVIKVGAT 249 (623)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~-~V~f~~ed------a~-r~d~e~l~~~~~~~~~aGa~ 249 (623)
+.|++-... +.......+..+.+|.. .+.+++-+ .. .... ...+.++.+.+.|++
T Consensus 99 d~V~lg~~~----------------l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~-~~~e~~~~~~~~G~~ 161 (244)
T 1vzw_A 99 TRVNLGTAA----------------LETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGG-DLYETLDRLNKEGCA 161 (244)
T ss_dssp SEEEECHHH----------------HHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCC-BHHHHHHHHHHTTCC
T ss_pred CEEEECchH----------------hhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCC-CHHHHHHHHHhCCCC
Confidence 988753211 11111122233333422 12223210 00 1111 244667777889999
Q ss_pred EEeecCcc--cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH-HHHHHHHHh---CCCEE
Q 006969 250 TLNIPDTV--GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST-ANTIAGACA---GARQV 310 (623)
Q Consensus 250 ~I~l~DTv--G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv-ANslaAv~a---GA~~V 310 (623)
.|.+-++. |..... -.++++.+++.+. +|+-. +-|... .|...++++ ||+.|
T Consensus 162 ~i~~~~~~~~~~~~g~-~~~~~~~i~~~~~----ipvia----~GGI~~~~d~~~~~~~~~~Gadgv 219 (244)
T 1vzw_A 162 RYVVTDIAKDGTLQGP-NLELLKNVCAATD----RPVVA----SGGVSSLDDLRAIAGLVPAGVEGA 219 (244)
T ss_dssp CEEEEEC-------CC-CHHHHHHHHHTCS----SCEEE----ESCCCSHHHHHHHHTTGGGTEEEE
T ss_pred EEEEeccCcccccCCC-CHHHHHHHHHhcC----CCEEE----ECCCCCHHHHHHHHhhccCCCcee
Confidence 88775532 211111 2356666666542 34443 356664 777778888 87765
No 151
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=89.16 E-value=6.6 Score=40.41 Aligned_cols=106 Identities=20% Similarity=0.178 Sum_probs=74.8
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCccc-----------ccCHHHH
Q 006969 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEF 265 (623)
Q Consensus 197 ~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG-----------~~~P~~v 265 (623)
.|.+|++..+...++-. ... |..+.+.++ -+++.+.+.++.+.++|+..|.|-|.++ ...++++
T Consensus 72 vt~~em~~~~~~I~r~~---~~p-viaD~d~Gy-g~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~ 146 (305)
T 3ih1_A 72 VTSTEVAERARDLVRAT---DLP-VLVDIDTGF-GGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEEL 146 (305)
T ss_dssp SCHHHHHHHHHHHHHHH---CCC-EEEECTTCS-SSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHH
T ss_pred CCHHHHHHHHHHHHHhc---CCC-EEEECCCCC-CCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHH
Confidence 47888888777666544 344 778886554 5688899999999999999999999874 3345678
Q ss_pred HHHHHHHHHhCCCCcceeEEEeec----CCcchHHHHHHHHHHhCCCEE
Q 006969 266 GKLIADIKANTPGIENVVISTHCQ----NDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 266 ~~li~~l~~~~~~~~~v~i~~H~H----ND~GlAvANslaAv~aGA~~V 310 (623)
.+.|+.+++.-++ ..|-.=+- +++--++.-+.+..+|||+.|
T Consensus 147 ~~rI~Aa~~A~~~---~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i 192 (305)
T 3ih1_A 147 VQKIKAIKEVAPS---LYIVARTDARGVEGLDEAIERANAYVKAGADAI 192 (305)
T ss_dssp HHHHHHHHHHCTT---SEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCC---eEEEEeeccccccCHHHHHHHHHHHHHcCCCEE
Confidence 8888888877322 23332222 123356777778888888876
No 152
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=89.13 E-value=1.6 Score=44.39 Aligned_cols=100 Identities=18% Similarity=0.105 Sum_probs=79.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEe-ecCCcchHHHHHHHHHH
Q 006969 229 GRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANTIAGAC 304 (623)
Q Consensus 229 ~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANslaAv~ 304 (623)
+..|.+-+.++++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ ++++-+| .+|+.--++..+..|-+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~la~~a~~ 93 (289)
T 2yxg_A 16 KEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNG--RVQVIAGAGSNCTEEAIELSVFAED 93 (289)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCHHHHHHHHHHHHh
Confidence 468999999999999999999999999988 46899999999999887765 3566555 47788889999999999
Q ss_pred hCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 305 AGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 305 aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
+||+.+=..---+-. .+-++++..++
T Consensus 94 ~Gadavlv~~P~y~~----~s~~~l~~~f~ 119 (289)
T 2yxg_A 94 VGADAVLSITPYYNK----PTQEGLRKHFG 119 (289)
T ss_dssp HTCSEEEEECCCSSC----CCHHHHHHHHH
T ss_pred cCCCEEEECCCCCCC----CCHHHHHHHHH
Confidence 999998765443321 24556665554
No 153
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=89.11 E-value=9.2 Score=40.09 Aligned_cols=178 Identities=18% Similarity=0.173 Sum_probs=106.2
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEec--CCCCh--------hHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHH
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGF--PAASK--------EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKT 167 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGf--P~~s~--------~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~ 167 (623)
=+.++-+++++.+.++|.+.+=.++ |..++ +.++.+++.++.. |+ |.++- -.....++.
T Consensus 117 es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~--------Gl-~~~te--~~d~~~~~~ 185 (350)
T 1vr6_A 117 EGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKY--------GM-YVVTE--ALGEDDLPK 185 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHH--------TC-EEEEE--CSSGGGHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHc--------CC-cEEEE--eCCHHHHHH
Confidence 3899999999999999999987764 65554 2334444444443 22 22221 124555665
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcC
Q 006969 168 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 168 a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aG 247 (623)
..+. ++.+.| ++.+. + +. +.++++-+.|+. |.++- +...+++.+...++.+...|
T Consensus 186 l~~~-----vd~lkI--gAr~~--------~---n~----~LL~~va~~~kP-Vilk~--G~~~tl~ei~~Ave~i~~~G 240 (350)
T 1vr6_A 186 VAEY-----ADIIQI--GARNA--------Q---NF----RLLSKAGSYNKP-VLLKR--GFMNTIEEFLLSAEYIANSG 240 (350)
T ss_dssp HHHH-----CSEEEE--CGGGT--------T---CH----HHHHHHHTTCSC-EEEEC--CTTCCHHHHHHHHHHHHHTT
T ss_pred HHHh-----CCEEEE--Ccccc--------c---CH----HHHHHHHccCCc-EEEcC--CCCCCHHHHHHHHHHHHHCC
Confidence 4443 456555 33221 1 11 233444467775 77753 33347888888888888999
Q ss_pred CcEEeecC--cccc--cCHHHHHH-HHHHHHHhCCCCcceeEEE---eecCCcchHHHHHHHHHHhCCC--EEEeccC
Q 006969 248 ATTLNIPD--TVGI--TMPTEFGK-LIADIKANTPGIENVVIST---HCQNDLGLSTANTIAGACAGAR--QVEVTIN 315 (623)
Q Consensus 248 a~~I~l~D--TvG~--~~P~~v~~-li~~l~~~~~~~~~v~i~~---H~HND~GlAvANslaAv~aGA~--~Vd~Tv~ 315 (623)
...+.||. +..+ .+++.+.- .|..+++.+. +||.+ |.=.+.-+...-+++|+.+||+ .|+.=+.
T Consensus 241 N~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~----lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~ 314 (350)
T 1vr6_A 241 NTKIILCERGIRTFEKATRNTLDISAVPIIRKESH----LPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPE 314 (350)
T ss_dssp CCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBS----SCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSC
T ss_pred CCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhC----CCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCC
Confidence 88888875 3222 12232221 3566777642 34644 5534444557778889999999 7877554
No 154
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=89.06 E-value=2.9 Score=43.35 Aligned_cols=130 Identities=16% Similarity=0.111 Sum_probs=83.5
Q ss_pred hcCCCCEEEEEecCCHHHHHHHhC------CCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHc
Q 006969 173 KYAKRPRIHTFIATSGIHMEHKLR------KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKV 246 (623)
Q Consensus 173 ~~a~~~~v~i~~~~Sd~h~~~~l~------~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~a 246 (623)
..+|++.|-+ +.|-+-+ ..+| .|.+|++..++..++-.++ . .|..+.+.++. +++.+.+.++.++++
T Consensus 56 e~aGfdai~v--s~~~~a~-~~lG~pD~~~vt~~em~~~~~~I~r~~~~--~-PviaD~d~Gyg-~~~~v~~tv~~l~~a 128 (318)
T 1zlp_A 56 EKTGFHAAFV--SGYSVSA-AMLGLPDFGLLTTTEVVEATRRITAAAPN--L-CVVVDGDTGGG-GPLNVQRFIRELISA 128 (318)
T ss_dssp HHTTCSEEEE--CHHHHHH-HHHCCCSSSCSCHHHHHHHHHHHHHHSSS--S-EEEEECTTCSS-SHHHHHHHHHHHHHT
T ss_pred HHcCCCEEEE--CcHHHhh-HhcCCCCCCCCCHHHHHHHHHHHHhhccC--C-CEEEeCCCCCC-CHHHHHHHHHHHHHc
Confidence 3468887654 2221211 2233 5788888877766655432 3 47888876655 899999999999999
Q ss_pred CCcEEeecCccc-----------ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCc----chHHHHHHHHHHhCCCEE
Q 006969 247 GATTLNIPDTVG-----------ITMPTEFGKLIADIKANTPGIENVVISTHCQNDL----GLSTANTIAGACAGARQV 310 (623)
Q Consensus 247 Ga~~I~l~DTvG-----------~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~----GlAvANslaAv~aGA~~V 310 (623)
|+..|.|-|.++ ....++..+.|+.+++..... +..|-.-+-... --++.-+.+..+|||+.|
T Consensus 129 Gaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~-~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i 206 (318)
T 1zlp_A 129 GAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDS-DFFLVARTDARAPHGLEEGIRRANLYKEAGADAT 206 (318)
T ss_dssp TCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTS-CCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred CCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccC-CcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEE
Confidence 999999999974 333456667787777654211 133333332111 136667778888888876
No 155
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=89.04 E-value=1.5 Score=44.68 Aligned_cols=100 Identities=17% Similarity=0.144 Sum_probs=78.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHHH
Q 006969 229 GRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGAC 304 (623)
Q Consensus 229 ~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvANslaAv~ 304 (623)
+..|.+-+.++++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ ++++-+|+ +|+.--++..+..|-+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~A~~ 93 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAG--RIKVIAGTGGNATHEAVHLTAHAKE 93 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHHHHHHHHHHHh
Confidence 468999999999999999999999999988 56899999999999987765 35565554 6788889999999999
Q ss_pred hCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 305 AGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 305 aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
+||+.+=..---+- + .+-++++..++
T Consensus 94 ~Gadavlv~~P~y~-~---~s~~~l~~~f~ 119 (294)
T 2ehh_A 94 VGADGALVVVPYYN-K---PTQRGLYEHFK 119 (294)
T ss_dssp TTCSEEEEECCCSS-C---CCHHHHHHHHH
T ss_pred cCCCEEEECCCCCC-C---CCHHHHHHHHH
Confidence 99999876544332 1 24455555444
No 156
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=88.96 E-value=1.9 Score=44.08 Aligned_cols=126 Identities=18% Similarity=0.177 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHhccccccCCCccceEEeecc-cchhhHHHHHHHHhcCCCCEEEEEecCCHHHH-HHHhCCCHHHHHHHH
Q 006969 129 DFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYAKRPRIHTFIATSGIHM-EHKLRKTKQQVVEIA 206 (623)
Q Consensus 129 d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~-~~~l~~t~ee~l~~~ 206 (623)
+++.++++++. + .|++.--+. +..+|+..+++.+...|.+.|.+.--.+..-. ...+++
T Consensus 123 n~~LLr~va~~-g---------kPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl--------- 183 (285)
T 3sz8_A 123 QTDLVVAIAKA-G---------KPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDM--------- 183 (285)
T ss_dssp CHHHHHHHHHT-S---------SCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCT---------
T ss_pred CHHHHHHHHcc-C---------CcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCH---------
Confidence 35567776652 1 145544444 47789999999988888877766432221100 000111
Q ss_pred HHHHHHHHHc--CCCeEEEcccCC----------CCCCHHHHHHHHHHHHHcCCcEE----------eecCcccccCHHH
Q 006969 207 RSMVKFARSL--GCDDVEFSPEDA----------GRSDRKFLYEILGEVIKVGATTL----------NIPDTVGITMPTE 264 (623)
Q Consensus 207 ~~~v~~ak~~--G~~~V~f~~eda----------~r~d~e~l~~~~~~~~~aGa~~I----------~l~DTvG~~~P~~ 264 (623)
.++...|+. |+. |.|++--+ +--.++++..++.+++.+||+.+ .++|--=.++|++
T Consensus 184 -~~i~~lk~~~~~~p-V~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~~pd~al~D~~~sl~p~e 261 (285)
T 3sz8_A 184 -LGFRQMAETTGGCP-VIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHPDPDRARCDGPSALPLHQ 261 (285)
T ss_dssp -THHHHHHHHTTSCC-EEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEEESCGGGCSCSSCCCEEGGG
T ss_pred -HHHHHHHHhCCCCC-EEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEeccChhccCCchhhccCHHH
Confidence 233444554 776 88855222 12356899999999999999943 3578888999999
Q ss_pred HHHHHHHHHHh
Q 006969 265 FGKLIADIKAN 275 (623)
Q Consensus 265 v~~li~~l~~~ 275 (623)
+.++++.+++.
T Consensus 262 l~~lv~~i~~i 272 (285)
T 3sz8_A 262 LEGLLSQMKAI 272 (285)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998863
No 157
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=88.90 E-value=1.2 Score=46.06 Aligned_cols=103 Identities=17% Similarity=0.068 Sum_probs=79.6
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 006969 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (623)
Q Consensus 228 a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvANslaAv 303 (623)
.+..|.+-+.++++.+++.|++.|.++=|+| .++.+|-.++++.+.+...+ +++|-+|+ +|+.--++..+..|-
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~a~ 103 (318)
T 3qfe_A 26 TDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGP--DFPIMAGVGAHSTRQVLEHINDAS 103 (318)
T ss_dssp TTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCT--TSCEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999999999 47899999999999887654 35666665 789999999999999
Q ss_pred HhCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 304 CAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 304 ~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
++||+.+=..---+=.+ -.+-++++..++
T Consensus 104 ~~Gadavlv~~P~y~~k--p~~~~~l~~~f~ 132 (318)
T 3qfe_A 104 VAGANYVLVLPPAYFGK--ATTPPVIKSFFD 132 (318)
T ss_dssp HHTCSEEEECCCCC-----CCCHHHHHHHHH
T ss_pred HcCCCEEEEeCCcccCC--CCCHHHHHHHHH
Confidence 99999986644322111 123455555554
No 158
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=88.88 E-value=1.9 Score=43.91 Aligned_cols=105 Identities=12% Similarity=0.069 Sum_probs=81.4
Q ss_pred cccC-CCCCCHHHHHHHHHHHHH-cCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEe-ecCCcchHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIK-VGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTA 297 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~-aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvA 297 (623)
.|.+ .+..|.+-+.++++.+++ .|++.|.++-|+|= ++++|-.++++.+.+...+ ++++-+| .+|+.--++.
T Consensus 13 TPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~ 90 (293)
T 1f6k_A 13 VSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKD--QIALIAQVGSVNLKEAVE 90 (293)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSCHHHHHH
T ss_pred cCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEecCCCCHHHHHH
Confidence 4443 367899999999999999 99999999999985 7899999999999987765 3556555 4778888999
Q ss_pred HHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 298 NTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 298 NslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
.+..|-++||+.+=..---+-. .+-++++..++
T Consensus 91 la~~a~~~Gadavlv~~P~y~~----~~~~~l~~~f~ 123 (293)
T 1f6k_A 91 LGKYATELGYDCLSAVTPFYYK----FSFPEIKHYYD 123 (293)
T ss_dssp HHHHHHHHTCSEEEEECCCSSC----CCHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCCC----CCHHHHHHHHH
Confidence 9999999999998765544321 23455555444
No 159
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=88.86 E-value=15 Score=37.08 Aligned_cols=192 Identities=15% Similarity=0.143 Sum_probs=116.4
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHHH
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAWE 170 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~e 170 (623)
+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+ +
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pvi~Gvg~~~t~~ai~la-~ 90 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVN-------KRIPVIAGTGSNNTAASIAMS-K 90 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSSHHHHHHHH-H
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCcccHHHHHHHH-H
Confidence 78888889999999999999887 3 466666665 55555555543 2357888887655444 4444 3
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHcCC
Q 006969 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKVGA 248 (623)
Q Consensus 171 al~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~aGa 248 (623)
....+|++.+-+..|-. .+.|.++.++-..+..+ ..++..+-|+ |. .+...+++.+.+++ +. .
T Consensus 91 ~a~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La----~~-p 155 (291)
T 3a5f_A 91 WAESIGVDGLLVITPYY-------NKTTQKGLVKHFKAVSD---AVSTPIIIYNVPGRTGLNITPGTLKELC----ED-K 155 (291)
T ss_dssp HHHHTTCSEEEEECCCS-------SCCCHHHHHHHC-CTGG---GCCSCEEEEECHHHHSCCCCHHHHHHHT----TS-T
T ss_pred HHHhcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCCCCCHHHHHHHH----cC-C
Confidence 33557999887765532 23466665554443322 2345544554 32 23346777776664 32 5
Q ss_pred cEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHHH
Q 006969 249 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEE 328 (623)
Q Consensus 249 ~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEe 328 (623)
..+.+.||.|- ..++.++++.....+ .+ +-.++++ .+.++..|++.+ +.| .+|...+.
T Consensus 156 nivgiK~s~gd--~~~~~~~~~~~~~~f------~v-~~G~d~~------~~~~l~~G~~G~---is~----~an~~P~~ 213 (291)
T 3a5f_A 156 NIVAVXEASGN--ISQIAQIKALCGDKL------DI-YSGNDDQ------IIPILALGGIGV---ISV----LANVIPED 213 (291)
T ss_dssp TEEEEEECSCC--HHHHHHHHHHHGGGS------EE-EESCGGG------HHHHHHTTCCEE---EES----GGGTCHHH
T ss_pred CEEEEeCCCCC--HHHHHHHHHhcCCCe------EE-EeCcHHH------HHHHHHCCCCEE---Eec----HHHhcHHH
Confidence 78999999985 456666665543222 22 3344432 455777898653 333 46777776
Q ss_pred HHHHHH
Q 006969 329 VVMAFK 334 (623)
Q Consensus 329 vv~~L~ 334 (623)
++...+
T Consensus 214 ~~~l~~ 219 (291)
T 3a5f_A 214 VHNMCE 219 (291)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665544
No 160
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=88.78 E-value=19 Score=35.27 Aligned_cols=159 Identities=15% Similarity=0.071 Sum_probs=91.3
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecc-----------cchhhHHH
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-----------CNERDIKT 167 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-----------~~~~dI~~ 167 (623)
+.++-.++++...+.|..-|++|. + +.++.+++.+. .|.+ +..| ...++++.
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~~~----~---~~i~~ir~~v~---------~Pvi-g~~k~d~~~~~~~I~~~~~~i~~ 96 (232)
T 3igs_A 34 KPEIVAAMALAAEQAGAVAVRIEG----I---DNLRMTRSLVS---------VPII-GIIKRDLDESPVRITPFLDDVDA 96 (232)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEES----H---HHHHHHHTTCC---------SCEE-EECBCCCSSCCCCBSCSHHHHHH
T ss_pred CcchHHHHHHHHHHCCCeEEEECC----H---HHHHHHHHhcC---------CCEE-EEEeecCCCcceEeCccHHHHHH
Confidence 578899999999999999999963 3 34566655421 1332 1111 12335555
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcC
Q 006969 168 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 168 a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aG 247 (623)
++++ |++.|.+-... ..++ +.+.+.+++++++|+. +..+. .+. +.++.+.++|
T Consensus 97 ~~~~----Gad~V~l~~~~---------~~~p----~~l~~~i~~~~~~g~~-v~~~v-----~t~----eea~~a~~~G 149 (232)
T 3igs_A 97 LAQA----GAAIIAVDGTA---------RQRP----VAVEALLARIHHHHLL-TMADC-----SSV----DDGLACQRLG 149 (232)
T ss_dssp HHHH----TCSEEEEECCS---------SCCS----SCHHHHHHHHHHTTCE-EEEEC-----CSH----HHHHHHHHTT
T ss_pred HHHc----CCCEEEECccc---------cCCH----HHHHHHHHHHHHCCCE-EEEeC-----CCH----HHHHHHHhCC
Confidence 5544 99988654332 0111 2344677888888874 44433 333 3456677899
Q ss_pred CcEEee--cC--ccc-ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEEEe
Q 006969 248 ATTLNI--PD--TVG-ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEV 312 (623)
Q Consensus 248 a~~I~l--~D--TvG-~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~Vd~ 312 (623)
++.|.+ -. +.+ ...| -.++++.+++. + +|+-. .-|.. ..+...++++||+.|-+
T Consensus 150 ad~Ig~~~~g~t~~~~~~~~--~~~~i~~l~~~--~---ipvIA----~GGI~t~~d~~~~~~~GadgV~V 209 (232)
T 3igs_A 150 ADIIGTTMSGYTTPDTPEEP--DLPLVKALHDA--G---CRVIA----EGRYNSPALAAEAIRYGAWAVTV 209 (232)
T ss_dssp CSEEECTTTTSSSSSCCSSC--CHHHHHHHHHT--T---CCEEE----ESCCCSHHHHHHHHHTTCSEEEE
T ss_pred CCEEEEcCccCCCCCCCCCC--CHHHHHHHHhc--C---CcEEE----ECCCCCHHHHHHHHHcCCCEEEE
Confidence 999943 21 111 1122 12456666653 2 23332 24543 57788888999998743
No 161
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=88.75 E-value=1.8 Score=44.43 Aligned_cols=108 Identities=15% Similarity=0.119 Sum_probs=83.7
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 298 (623)
.|.+ .+..|.+-+.+.++.+++.|++.|.++=|+|= ++++|-.++++.+.+...+ ++++-+|+ +|+.--++.-
T Consensus 24 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~l 101 (307)
T 3s5o_A 24 TPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPK--NRLLLAGSGCESTQATVEM 101 (307)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCT--TSEEEEECCCSSHHHHHHH
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCC--CCcEEEecCCCCHHHHHHH
Confidence 4443 35789999999999999999999999999995 7899999999999998765 46777775 7899999999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+..|-++||+.+=..---+-. +..+-++++..++.
T Consensus 102 a~~A~~~Gadavlv~~P~y~~--~~~s~~~l~~~f~~ 136 (307)
T 3s5o_A 102 TVSMAQVGADAAMVVTPCYYR--GRMSSAALIHHYTK 136 (307)
T ss_dssp HHHHHHTTCSEEEEECCCTTG--GGCCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCCcCC--CCCCHHHHHHHHHH
Confidence 999999999998765333211 11345556555543
No 162
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=88.74 E-value=6.5 Score=39.50 Aligned_cols=176 Identities=15% Similarity=0.144 Sum_probs=104.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEec--CCCCh--------hHHHHHHHHHHHhccccccCCCccceEEeecccchhhHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGF--PAASK--------EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIK 166 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGf--P~~s~--------~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~ 166 (623)
.=+.+.-+++++.|.++|.+.+=.++ |..++ +.+..++++++.. |+ |.++- --....++
T Consensus 33 ~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--------Gl-~~~te--~~d~~~~~ 101 (262)
T 1zco_A 33 IESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--------GL-VTVTE--VMDTRHVE 101 (262)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--------TC-EEEEE--CCCGGGHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--------CC-cEEEe--eCCHHhHH
Confidence 34799999999999999999988774 54444 2334455555443 22 22221 11344455
Q ss_pred HHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHc
Q 006969 167 TAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKV 246 (623)
Q Consensus 167 ~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~a 246 (623)
...+. ++.+.|-.. +. + +. +.++++-+.|+. |.++- +...+++.+...++.+...
T Consensus 102 ~l~~~-----vd~~kIga~--~~--------~---n~----~ll~~~a~~~kP-V~lk~--G~~~t~~e~~~Av~~i~~~ 156 (262)
T 1zco_A 102 LVAKY-----SDILQIGAR--NS--------Q---NF----ELLKEVGKVENP-VLLKR--GMGNTIQELLYSAEYIMAQ 156 (262)
T ss_dssp HHHHH-----CSEEEECGG--GT--------T---CH----HHHHHHTTSSSC-EEEEC--CTTCCHHHHHHHHHHHHTT
T ss_pred HHHhh-----CCEEEECcc--cc--------c---CH----HHHHHHHhcCCc-EEEec--CCCCCHHHHHHHHHHHHHC
Confidence 44442 466655322 11 1 11 233444447876 77742 2234788888888888889
Q ss_pred CCcEEeecC----cc-cccCHHHHH-HHHHHHHHhCCCCcceeE-EEeecCCcch---HHHHHHHHHHhCCC--EEEecc
Q 006969 247 GATTLNIPD----TV-GITMPTEFG-KLIADIKANTPGIENVVI-STHCQNDLGL---STANTIAGACAGAR--QVEVTI 314 (623)
Q Consensus 247 Ga~~I~l~D----Tv-G~~~P~~v~-~li~~l~~~~~~~~~v~i-~~H~HND~Gl---AvANslaAv~aGA~--~Vd~Tv 314 (623)
|...+.|+- |. ++ .++.+. ..+..+++.+. +|| +.=.|- .|. .-.-+.+|+..||+ .|+.=+
T Consensus 157 Gn~~i~L~~RG~~~~~~y-~~~~v~L~ai~~lk~~~~----~pVi~d~sH~-~g~~~~v~~~~~aAva~Ga~Gl~iE~H~ 230 (262)
T 1zco_A 157 GNENVILCERGIRTFETA-TRFTLDISAVPVVKELSH----LPIIVDPSHP-AGRRSLVIPLAKAAYAIGADGIMVEVHP 230 (262)
T ss_dssp TCCCEEEEECCBCCSCCS-SSSBCCTTHHHHHHHHBS----SCEEECSSTT-TCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CCCeEEEEECCCCCCCCc-ChhhcCHHHHHHHHhhhC----CCEEEEcCCC-CCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 987777776 54 55 445444 56777887642 334 444453 232 22446679999999 887654
No 163
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=88.70 E-value=23 Score=36.13 Aligned_cols=197 Identities=15% Similarity=0.157 Sum_probs=120.3
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHHH
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAWE 170 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~e 170 (623)
+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+-.
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~-------grvpViaGvg~~st~~ai~la~~ 102 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVD-------GKIPVIVGAGTNSTEKTLKLVKQ 102 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-------CCCeEEEcCCCccHHHHHHHHHH
Confidence 77888889999999999999887 3 466667665 55555555542 2357888887655444 444332
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHcCC
Q 006969 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKVGA 248 (623)
Q Consensus 171 al~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~aGa 248 (623)
...+|++.+-+..|-. .+-|.++.++-..+..+ ..++..+-|+ |. .+...+++.+.++++ + -.
T Consensus 103 -A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~---a~~lPiilYn~P~~tg~~l~~~~~~~La~---~-~p 167 (306)
T 1o5k_A 103 -AEKLGANGVLVVTPYY-------NKPTQEGLYQHYKYISE---RTDLGIVVYNVPGRTGVNVLPETAARIAA---D-LK 167 (306)
T ss_dssp -HHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHT---TCSSCEEEEECHHHHSCCCCHHHHHHHHH---H-CT
T ss_pred -HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hCCCCEEEEeCccccCcCCCHHHHHHHHH---h-CC
Confidence 3446899887765532 24466666655544433 2345545554 32 234567787777763 2 25
Q ss_pred cEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHHH
Q 006969 249 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEE 328 (623)
Q Consensus 249 ~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEe 328 (623)
..+.+.||.|- ..++.++++.....-++ ..+ +-..++ ..+.++..|++.+ +.| .+|+..+.
T Consensus 168 nIvgiKdssgd--~~~~~~~~~~~~~~~~~---f~v-~~G~d~------~~l~~l~~G~~G~---is~----~an~~P~~ 228 (306)
T 1o5k_A 168 NVVGIXEANPD--IDQIDRTVSLTKQARSD---FMV-WSGNDD------RTFYLLCAGGDGV---ISV----VSNVAPKQ 228 (306)
T ss_dssp TEEEEEECCCC--HHHHHHHHHHHHHHCTT---CEE-EESSGG------GHHHHHHHTCCEE---EES----GGGTCHHH
T ss_pred CEEEEeCCCCC--HHHHHHHHHhcCCCCCc---EEE-EECcHH------HHHHHHHCCCCEE---Eec----HHHhhHHH
Confidence 79999999985 45677777665541112 112 334433 2556678898754 333 46777777
Q ss_pred HHHHHHh
Q 006969 329 VVMAFKC 335 (623)
Q Consensus 329 vv~~L~~ 335 (623)
++...+.
T Consensus 229 ~~~l~~a 235 (306)
T 1o5k_A 229 MVELCAE 235 (306)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655543
No 164
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=88.65 E-value=2.3 Score=43.79 Aligned_cols=104 Identities=13% Similarity=0.098 Sum_probs=84.3
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 298 (623)
.|.+ .+..|.+-+.++++.+++.|++.|.++=|+|= ++++|-.++++.+.+.. + +++|-+++ +|+.--++.-
T Consensus 18 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-g--rvpViaGvg~~~t~~ai~l 94 (313)
T 3dz1_A 18 TPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-K--SMQVIVGVSAPGFAAMRRL 94 (313)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-T--TSEEEEECCCSSHHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-C--CCcEEEecCCCCHHHHHHH
Confidence 4443 45789999999999999999999999999995 78999999999999988 5 47777776 7999999999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+..|-++||+.+=. +...- . .+-++++..++.
T Consensus 95 a~~A~~~Gadavlv-~~P~~-~---~s~~~l~~~f~~ 126 (313)
T 3dz1_A 95 ARLSMDAGAAGVMI-APPPS-L---RTDEQITTYFRQ 126 (313)
T ss_dssp HHHHHHHTCSEEEE-CCCTT-C---CSHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEE-CCCCC-C---CCHHHHHHHHHH
Confidence 99999999999866 34442 1 356666666553
No 165
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=88.63 E-value=1.1 Score=45.73 Aligned_cols=102 Identities=16% Similarity=0.097 Sum_probs=79.8
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEe-ecCCcchHHHHHHHHH
Q 006969 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANTIAGA 303 (623)
Q Consensus 228 a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANslaAv 303 (623)
.+..|.+-+.++++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ ++++-+| .+|+.--++..+..|-
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~la~~a~ 93 (292)
T 2ojp_A 16 KGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG--RIPVIAGTGANATAEAISLTQRFN 93 (292)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCccHHHHHHHHHHHH
Confidence 3578999999999999999999999999998 56899999999999887655 3455554 4778888888999999
Q ss_pred HhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 304 CAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 304 ~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
++||+.+=..---+- + .+-++++..++.
T Consensus 94 ~~Gadavlv~~P~y~-~---~s~~~l~~~f~~ 121 (292)
T 2ojp_A 94 DSGIVGCLTVTPYYN-R---PSQEGLYQHFKA 121 (292)
T ss_dssp TSSCSEEEEECCCSS-C---CCHHHHHHHHHH
T ss_pred hcCCCEEEECCCCCC-C---CCHHHHHHHHHH
Confidence 999999866544332 2 245666655544
No 166
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=88.61 E-value=4.1 Score=39.93 Aligned_cols=191 Identities=14% Similarity=0.124 Sum_probs=98.4
Q ss_pred HHHHHHHhHcCCCEEEEecCCC---------ChhHHHHHHHHHHHhccccccCCCccceEEeeccc------ch------
Q 006969 104 LDIARQLAKLGVDIIEAGFPAA---------SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC------NE------ 162 (623)
Q Consensus 104 l~Ia~~L~~~Gvd~IEvGfP~~---------s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~------~~------ 162 (623)
.+.++.+.++|++.||+ |+.. ++.+.+.++.+.+.. ++ ..+++++.. .+
T Consensus 17 ~~~~~~~~~~G~~~vEl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------gl-~~~~~h~~~~~~l~s~~~~r~~~ 86 (270)
T 3aam_A 17 AGAVEEATALGLTAFQI-FAKSPRSWRPRALSPAEVEAFRALREAS--------GG-LPAVIHASYLVNLGAEGELWEKS 86 (270)
T ss_dssp HHHHHHHHHHTCSCEEE-ESSCTTCCSCCCCCHHHHHHHHHHHHHT--------TC-CCEEEECCTTCCTTCSSTHHHHH
T ss_pred HHHHHHHHHcCCCEEEE-eCCCCCcCcCCCCCHHHHHHHHHHHHHc--------CC-ceEEEecCcccCCCCCHHHHHHH
Confidence 44556667789999999 5421 234555565555542 22 011221110 11
Q ss_pred -hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHH-HcCCCeEEEccc--CCC--CCCHHHH
Q 006969 163 -RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFAR-SLGCDDVEFSPE--DAG--RSDRKFL 236 (623)
Q Consensus 163 -~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak-~~G~~~V~f~~e--da~--r~d~e~l 236 (623)
+.++++++.....|.+.|.+..... ..+..++.+.+++++|+ +.|+. +.+-+. ..+ -.+++.+
T Consensus 87 ~~~~~~~i~~a~~lGa~~vv~h~g~~----------~~~~~~~~l~~l~~~a~~~~gv~-l~lEn~~~~~~~~~~~~~~~ 155 (270)
T 3aam_A 87 VASLADDLEKAALLGVEYVVVHPGSG----------RPERVKEGALKALRLAGVRSRPV-LLVENTAGGGEKVGARFEEL 155 (270)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCBS----------CHHHHHHHHHHHHHHHTCCSSSE-EEEECCCCCTTBSCCSHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCC----------CHHHHHHHHHHHHHhhcccCCCE-EEEecCCCCCCccCCCHHHH
Confidence 1223444444445778776543321 11566777778888887 77763 544222 111 1378888
Q ss_pred HHHHHHHHHcCCcEEeecCcc-----cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEE
Q 006969 237 YEILGEVIKVGATTLNIPDTV-----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 311 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~DTv-----G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd 311 (623)
.++++.+ ..| +++ ||. |.-....+.++++.+.+.++. +-...+|.||..+- .|.. .|
T Consensus 156 ~~l~~~v-~vg---~~l-D~~H~~~~g~d~~~~~~~~l~~~~~~~g~--~~i~~vHl~D~~~~----------~~~~-~d 217 (270)
T 3aam_A 156 AWLVADT-PLQ---VCL-DTCHAYAAGYDVAEDPLGVLDALDRAVGL--ERVPVVHLNDSVGG----------LGSR-VD 217 (270)
T ss_dssp HHHHTTS-SCE---EEE-EHHHHHHHTCCTTTCHHHHHHHHHHHTCG--GGCCEEECCEESSC----------TTCC-CC
T ss_pred HHHHHhC-CEE---EEE-ehhhHHhccCCchhhHHHHHHHHHHhcCc--cceeEEEEecCCCc----------cccC-cc
Confidence 8888776 222 222 543 322111345566666544320 12357898886541 0111 00
Q ss_pred eccCCccCccCcccHHHHHHHHHhcc
Q 006969 312 VTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 312 ~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
- -..+|+ |+.+ ++++..|+..+
T Consensus 218 ~-h~~~G~--G~id-~~~~~~L~~~~ 239 (270)
T 3aam_A 218 H-HAHLLQ--GKIG-EGLKRVFLDPR 239 (270)
T ss_dssp C-EECTTS--SSST-THHHHHHTCGG
T ss_pred c-ccCCCC--CCcC-HHHHHHHhccC
Confidence 0 012444 8899 99999998754
No 167
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=88.59 E-value=1.7 Score=44.86 Aligned_cols=106 Identities=19% Similarity=0.197 Sum_probs=83.0
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 298 (623)
.|.+ .+..|.+-+.++++.+++.|++.|.++-|+|= ++++|-.++++.+.+...+ +++|-+|+ +|+.--++..
T Consensus 33 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~st~eai~l 110 (314)
T 3qze_A 33 TPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKG--RIPVIAGTGANSTREAVAL 110 (314)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCcCHHHHHHH
Confidence 5543 45789999999999999999999999999995 5889999999999887765 36666665 7889999999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+..|-++||+.+=..---+- + .+-++++..++.
T Consensus 111 a~~A~~~Gadavlv~~P~y~-~---~s~~~l~~~f~~ 143 (314)
T 3qze_A 111 TEAAKSGGADACLLVTPYYN-K---PTQEGMYQHFRH 143 (314)
T ss_dssp HHHHHHTTCSEEEEECCCSS-C---CCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCCCC-C---CCHHHHHHHHHH
Confidence 99999999999876543332 2 244566655543
No 168
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=88.59 E-value=20 Score=35.24 Aligned_cols=188 Identities=15% Similarity=0.049 Sum_probs=110.4
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecc-cchhhHHH-HHHHHh
Q 006969 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKT-AWEAVK 173 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~-a~eal~ 173 (623)
-..+.++..++.+...+.|+.-+-+ +|.. ++...+.+.. + .+..+.+|-. .....++. ..+. .
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv-~p~~-------v~~a~~~l~g-v-----~v~tvigFP~G~~~~~~k~~E~~~-i 76 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCV-NPIY-------APVVRPLLRK-V-----KLCVVADFPFGALPTASRIALVSR-L 76 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEE-CGGG-------HHHHGGGCSS-S-----EEEEEESTTTCCSCHHHHHHHHHH-H
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEE-CHHH-------HHHHHHHhCC-C-----eEEEEeCCCCCCCchHHHHHHHHH-H
Confidence 3468999999999999999999988 5542 3333333211 1 1122334311 11112221 1233 4
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 006969 174 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 253 (623)
Q Consensus 174 ~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l 253 (623)
..|++.|.+.+....+ .....+++.+.+.+.++.+.+.+++ |.+ |...-+ .+.+...++.+.++|||-|--
T Consensus 77 ~~GAdEID~Vinig~~-----~~g~~~~v~~ei~~v~~a~~~~~lK-vIl--Et~~Lt-~eei~~a~~ia~eaGADfVKT 147 (226)
T 1vcv_A 77 AEVADEIDVVAPIGLV-----KSRRWAEVRRDLISVVGAAGGRVVK-VIT--EEPYLR-DEERYTLYDIIAEAGAHFIKS 147 (226)
T ss_dssp TTTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHTTTSEEE-EEC--CGGGCC-HHHHHHHHHHHHHHTCSEEEC
T ss_pred HCCCCEEEEecchhhh-----cCCCHHHHHHHHHHHHHHHcCCCce-EEE--eccCCC-HHHHHHHHHHHHHcCCCEEEe
Confidence 4699999998865421 2345677888888888877654443 444 333333 678999999999999998886
Q ss_pred c--Cc----------ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHh---CCC----EEEec
Q 006969 254 P--DT----------VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA---GAR----QVEVT 313 (623)
Q Consensus 254 ~--DT----------vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~a---GA~----~Vd~T 313 (623)
. =+ .|.++|+.+.-+-+.++. .++.-.+..+==.++ ...+++-+++ ||+ +|=+|
T Consensus 148 STGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~-~g~~v~vKaaGGirt-----~~~al~~i~a~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 148 STGFAEEAYAARQGNPVHSTPERAAAIARYIKE-KGYRLGVKMAGGIRT-----REQAKAIVDAIGWGEDPARVRLGTS 220 (226)
T ss_dssp CCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHH-HTCCCEEEEESSCCS-----HHHHHHHHHHHCSCSCTTTEEEEES
T ss_pred CCCCCccccccccCCCCCCCHHHHHHHHHHHHH-hCCCceEEEeCCCCC-----HHHHHHHHHHHHCCCCcCCceEecC
Confidence 5 22 367888888655444443 332101222211122 4455666666 999 87444
No 169
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=88.57 E-value=1.6 Score=45.16 Aligned_cols=105 Identities=19% Similarity=0.162 Sum_probs=81.8
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 298 (623)
.|.+ .+..|.+-+.++++.+++.|++.|.++-|+|= ++.+|-.++++.+.+...+ +++|-+++ +|+.--++.-
T Consensus 32 TPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~st~~ai~l 109 (315)
T 3si9_A 32 TPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAK--RVPVVAGAGSNSTSEAVEL 109 (315)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSHHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCHHHHHHH
Confidence 5543 45789999999999999999999999999985 5889999999999887655 35666665 7899999999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
+..|-++||+.+=..---+- + .+-++++..++
T Consensus 110 a~~A~~~Gadavlv~~P~y~-~---~~~~~l~~~f~ 141 (315)
T 3si9_A 110 AKHAEKAGADAVLVVTPYYN-R---PNQRGLYTHFS 141 (315)
T ss_dssp HHHHHHTTCSEEEEECCCSS-C---CCHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCC-C---CCHHHHHHHHH
Confidence 99999999999866543332 2 23455555554
No 170
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=88.44 E-value=1.7 Score=44.65 Aligned_cols=106 Identities=17% Similarity=0.150 Sum_probs=80.9
Q ss_pred cccCCCCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEe-ecCCcchHHHHH
Q 006969 224 SPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANT 299 (623)
Q Consensus 224 ~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANs 299 (623)
.|.+.+..|.+-+.++++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ +++|-++ .+|+.--++..+
T Consensus 23 TPf~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g--rvpViaGvg~~st~~ai~la 100 (306)
T 1o5k_A 23 TPFKNGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDG--KIPVIVGAGTNSTEKTLKLV 100 (306)
T ss_dssp CCEETTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCHHHHHHHH
T ss_pred cCcCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEcCCCccHHHHHHHH
Confidence 44333568999999999999999999999999988 56899999999999887654 3455554 477888899999
Q ss_pred HHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 300 IAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 300 laAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
..|-++||+.+=..---+- + .+-++++..++.
T Consensus 101 ~~A~~~Gadavlv~~P~y~-~---~s~~~l~~~f~~ 132 (306)
T 1o5k_A 101 KQAEKLGANGVLVVTPYYN-K---PTQEGLYQHYKY 132 (306)
T ss_dssp HHHHHHTCSEEEEECCCSS-C---CCHHHHHHHHHH
T ss_pred HHHHhcCCCEEEECCCCCC-C---CCHHHHHHHHHH
Confidence 9999999999876554432 1 244566555543
No 171
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=88.41 E-value=4.4 Score=41.39 Aligned_cols=108 Identities=14% Similarity=0.075 Sum_probs=72.0
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCccc------------ccCH-H
Q 006969 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG------------ITMP-T 263 (623)
Q Consensus 197 ~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG------------~~~P-~ 263 (623)
.|.+|++..+...++-. ... |..+.+.++. +++.+.+.++.++++|+..|.|-|.++ .+.| +
T Consensus 58 vt~~em~~~~~~I~~~~---~~P-viaD~d~Gyg-~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~ 132 (290)
T 2hjp_A 58 LSMSTHLEMMRAIASTV---SIP-LIADIDTGFG-NAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIE 132 (290)
T ss_dssp SCHHHHHHHHHHHHTTC---SSC-EEEECTTTTS-SHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHH
T ss_pred CCHHHHHHHHHHHHhcC---CCC-EEEECCCCCC-CHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHH
Confidence 47888777666544432 344 7788876655 999999999999999999999999973 1444 4
Q ss_pred HHHHHHHHHHHhCCCCcceeEEEeecCC-----cchHHHHHHHHHHhCCCEE
Q 006969 264 EFGKLIADIKANTPGIENVVISTHCQND-----LGLSTANTIAGACAGARQV 310 (623)
Q Consensus 264 ~v~~li~~l~~~~~~~~~v~i~~H~HND-----~GlAvANslaAv~aGA~~V 310 (623)
++.+.|+.+++.-... +..|-.-+-.. +--++.-+.+..+|||+.|
T Consensus 133 e~~~kI~Aa~~a~~~~-~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i 183 (290)
T 2hjp_A 133 EFQGKIAAATAARADR-DFVVIARVEALIAGLGQQEAVRRGQAYEEAGADAI 183 (290)
T ss_dssp HHHHHHHHHHHHCSST-TSEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHhcccC-CcEEEEeehHhhccccHHHHHHHHHHHHHcCCcEE
Confidence 6777788777763211 23343333222 2345566667777788765
No 172
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=88.23 E-value=1.5 Score=44.79 Aligned_cols=100 Identities=20% Similarity=0.154 Sum_probs=77.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEe-ecCCcchHHHHHHHHHH
Q 006969 229 GRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANTIAGAC 304 (623)
Q Consensus 229 ~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANslaAv~ 304 (623)
+..|.+-+.++++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ ++++-++ .+|+.--++..+..|-+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~la~~A~~ 93 (292)
T 2vc6_A 16 DRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANG--RVPVIAGAGSNSTAEAIAFVRHAQN 93 (292)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCccHHHHHHHHHHHHH
Confidence 578999999999999999999999999998 56899999999999887654 2444444 47788888999999999
Q ss_pred hCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 305 AGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 305 aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
+||+.+=..---+- + .+-++++..++
T Consensus 94 ~Gadavlv~~P~y~-~---~s~~~l~~~f~ 119 (292)
T 2vc6_A 94 AGADGVLIVSPYYN-K---PTQEGIYQHFK 119 (292)
T ss_dssp TTCSEEEEECCCSS-C---CCHHHHHHHHH
T ss_pred cCCCEEEEcCCCCC-C---CCHHHHHHHHH
Confidence 99999866544332 1 24455655443
No 173
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=88.16 E-value=2 Score=44.28 Aligned_cols=105 Identities=11% Similarity=0.045 Sum_probs=79.3
Q ss_pred ccc-C-CCCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHH
Q 006969 224 SPE-D-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTAN 298 (623)
Q Consensus 224 ~~e-d-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvAN 298 (623)
.|- + .+..|.+-+.++++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ +++|-+++=.+.--++.-
T Consensus 21 TPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g--rvpViaGvg~st~~ai~l 98 (314)
T 3d0c_A 21 VPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNG--RATVVAGIGYSVDTAIEL 98 (314)
T ss_dssp CCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECSSHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCC--CCeEEecCCcCHHHHHHH
Confidence 554 2 3578999999999999999999999999988 57899999999999987765 356655553366678888
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
+..|-++||+.+=..---+-. .+-++++..++
T Consensus 99 a~~A~~~Gadavlv~~P~y~~----~s~~~l~~~f~ 130 (314)
T 3d0c_A 99 GKSAIDSGADCVMIHQPVHPY----ITDAGAVEYYR 130 (314)
T ss_dssp HHHHHHTTCSEEEECCCCCSC----CCHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCCCCC----CCHHHHHHHHH
Confidence 889999999998765443321 23455554444
No 174
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=88.07 E-value=5 Score=42.13 Aligned_cols=141 Identities=14% Similarity=0.190 Sum_probs=85.0
Q ss_pred HHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecC
Q 006969 107 ARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIAT 186 (623)
Q Consensus 107 a~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~ 186 (623)
++.|.++|++.+-+|+.- =+++..++.+++. + .|.|..-+.+..++|+.|++.+...|.+ |.+.-.+
T Consensus 104 vd~l~~~~v~~~KI~S~~--~~N~pLL~~va~~-g---------KPviLstGmstl~Ei~~Ave~i~~~g~~-viLlhC~ 170 (350)
T 3g8r_A 104 VDLIEAHGIEIIKIASCS--FTDWPLLERIARS-D---------KPVVASTAGARREDIDKVVSFMLHRGKD-LTIMHCV 170 (350)
T ss_dssp HHHHHHTTCCEEEECSSS--TTCHHHHHHHHTS-C---------SCEEEECTTCCHHHHHHHHHHHHTTTCC-EEEEECC
T ss_pred HHHHHHcCCCEEEECccc--ccCHHHHHHHHhh-C---------CcEEEECCCCCHHHHHHHHHHHHHcCCC-EEEEecC
Confidence 445566677777776542 3467788887763 1 2678777778999999999988877765 4442122
Q ss_pred CHHHHHHHhCCCHHHHHHHHHHHHHHHHH-c-CCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEE---------eecC
Q 006969 187 SGIHMEHKLRKTKQQVVEIARSMVKFARS-L-GCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL---------NIPD 255 (623)
Q Consensus 187 Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~-~-G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I---------~l~D 255 (623)
|. +-.++++ ++ ..+|...|+ . ++. |.|+--..+... .+..+++.+||+.| ..+|
T Consensus 171 s~------YPt~~~~-~n--L~aI~~Lk~~fp~lp-VG~SdHt~g~~~-----~~~~AAvAlGA~vIEkH~tldr~~g~D 235 (350)
T 3g8r_A 171 AE------YPTPDDH-LH--LARIKTLRQQYAGVR-IGYSTHEDPDLM-----EPIMLAVAQGATVFEKHVGLPTDQYGI 235 (350)
T ss_dssp CC------SSCCGGG-CC--TTHHHHHHHHCTTSE-EEEEECCCSSCC-----HHHHHHHHTTCCEEEEEBCCCBTTBCC
T ss_pred CC------CCCCccc-CC--HHHHHHHHHHCCCCC-EEcCCCCCCCcc-----HHHHHHHHcCCCEEEEecCcccCCCCc
Confidence 21 1111111 11 124444554 4 454 766522111221 24457788999754 2455
Q ss_pred cccccCHHHHHHHHHHHHHh
Q 006969 256 TVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 256 TvG~~~P~~v~~li~~l~~~ 275 (623)
..=.++|.++.++++.+|..
T Consensus 236 ~~~Sl~P~ef~~lv~~ir~i 255 (350)
T 3g8r_A 236 NNYSANPEQVRRWLAAAARA 255 (350)
T ss_dssp CTTCBCHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHH
Confidence 55678999999999999863
No 175
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=87.96 E-value=1.6 Score=44.68 Aligned_cols=101 Identities=24% Similarity=0.201 Sum_probs=79.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEe-ecCCcchHHHHHHHHHH
Q 006969 229 GRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANTIAGAC 304 (623)
Q Consensus 229 ~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvANslaAv~ 304 (623)
+..|.+-+.++++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ ++++-++ .+|+.--++..+..|-+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~A~~ 93 (297)
T 2rfg_A 16 GQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQG--RVPVIAGAGSNNPVEAVRYAQHAQQ 93 (297)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEccCCCCHHHHHHHHHHHHh
Confidence 578999999999999999999999999988 57899999999999887654 2444444 57888889999999999
Q ss_pred hCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 305 AGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 305 aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+||+.+=..---+-. .+-++++..++.
T Consensus 94 ~Gadavlv~~P~y~~----~s~~~l~~~f~~ 120 (297)
T 2rfg_A 94 AGADAVLCVAGYYNR----PSQEGLYQHFKM 120 (297)
T ss_dssp HTCSEEEECCCTTTC----CCHHHHHHHHHH
T ss_pred cCCCEEEEcCCCCCC----CCHHHHHHHHHH
Confidence 999998776544322 245666655543
No 176
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=87.90 E-value=4.6 Score=42.07 Aligned_cols=132 Identities=14% Similarity=0.032 Sum_probs=83.4
Q ss_pred HhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-eEEEcccCC--CCCCHHHHH
Q 006969 172 VKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDA--GRSDRKFLY 237 (623)
Q Consensus 172 l~~a~~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~-~V~f~~eda--~r~d~e~l~ 237 (623)
.+.+|.+.|.|-.+- |+. ++...+|-+.+.-.+.+.+.|+.+|+. .+. .|.+++.|. ...+.+...
T Consensus 153 a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~ 232 (340)
T 3gr7_A 153 AKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYV 232 (340)
T ss_dssp HHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHH
T ss_pred HHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHH
Confidence 456799999887763 332 333456777877777777888777765 222 256677542 124567788
Q ss_pred HHHHHHHHcCCcEEeecCc--ccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-CCEE
Q 006969 238 EILGEVIKVGATTLNIPDT--VGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQV 310 (623)
Q Consensus 238 ~~~~~~~~aGa~~I~l~DT--vG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A~~V 310 (623)
++++.+.++|++.|.+.+. ... ..|....++++.+++.+. +||..=.-- .-...+..+++.| |+.|
T Consensus 233 ~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~----iPVi~~GgI---~s~e~a~~~L~~G~aD~V 304 (340)
T 3gr7_A 233 PYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREAD----IPTGAVGLI---TSGWQAEEILQNGRADLV 304 (340)
T ss_dssp HHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTT----CCEEEESSC---CCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcC----CcEEeeCCC---CCHHHHHHHHHCCCeeEE
Confidence 9999999999999998652 110 112224567788888773 344432211 0245667788888 8866
No 177
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=87.87 E-value=1.9 Score=43.98 Aligned_cols=79 Identities=19% Similarity=0.228 Sum_probs=55.6
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeecC-cc--c---ccCHHHHH---HHHHHHHHhCCCCcceeEEEeecCCcchHH
Q 006969 227 DAGRS-DRKFLYEILGEVIKVGATTLNIPD-TV--G---ITMPTEFG---KLIADIKANTPGIENVVISTHCQNDLGLST 296 (623)
Q Consensus 227 da~r~-d~e~l~~~~~~~~~aGa~~I~l~D-Tv--G---~~~P~~v~---~li~~l~~~~~~~~~v~i~~H~HND~GlAv 296 (623)
|+++. +++.+.+.++..++.||+.|-+.= +. | +...+|+. .+|+.+++.+ +++|++++.+ -
T Consensus 30 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~----~~piSIDT~~-----~ 100 (282)
T 1aj0_A 30 DGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF----EVWISVDTSK-----P 100 (282)
T ss_dssp CCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC----CCEEEEECCC-----H
T ss_pred cccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc----CCeEEEeCCC-----H
Confidence 55554 678999999999999999987763 22 2 11134444 4556666655 3789999987 4
Q ss_pred HHHHHHHHhCCCEEEecc
Q 006969 297 ANTIAGACAGARQVEVTI 314 (623)
Q Consensus 297 ANslaAv~aGA~~Vd~Tv 314 (623)
.-+.+|+++|++.|+-.-
T Consensus 101 ~va~aAl~aGa~iINdvs 118 (282)
T 1aj0_A 101 EVIRESAKVGAHIINDIR 118 (282)
T ss_dssp HHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHcCCCEEEECC
Confidence 556789999999996543
No 178
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=87.86 E-value=5.7 Score=38.63 Aligned_cols=197 Identities=15% Similarity=0.179 Sum_probs=100.6
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEe-cCCC----ChhHHHHHHHHHHHhccccccCCCccc-eEEe---ecccc-------
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAG-FPAA----SKEDFEAVRTIAKEVGNAVDAESGYVP-VICG---LSRCN------- 161 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvG-fP~~----s~~d~e~v~~i~~~~~~~~~~~~~l~~-~i~~---~~r~~------- 161 (623)
++.++.++. +.++|++.||+. .+.. .+.+.+.++.+.+.. ++.. .+.. |....
T Consensus 14 ~~~~~~l~~---~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~--------gl~~~~~~~~~~~~~~~~~~~~~~ 82 (278)
T 1i60_A 14 SNLKLDLEL---CEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTH--------HIKPLALNALVFFNNRDEKGHNEI 82 (278)
T ss_dssp CCHHHHHHH---HHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTS--------SCEEEEEEEEECCSSCCHHHHHHH
T ss_pred CCHHHHHHH---HHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHc--------CCCeeeeccccccccCCHHHHHHH
Confidence 566665554 567799999997 4311 223445555555432 3321 1222 11111
Q ss_pred hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCH----HHHHHHHHHHHHHHHHcCCCeEEEcccCC---CCCCHH
Q 006969 162 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTK----QQVVEIARSMVKFARSLGCDDVEFSPEDA---GRSDRK 234 (623)
Q Consensus 162 ~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~----ee~l~~~~~~v~~ak~~G~~~V~f~~eda---~r~d~e 234 (623)
.+.++++++.....|.+.|.+.....+- +.+. +...+.+.++.++|++.|+. +.+-+... .-.+++
T Consensus 83 ~~~~~~~i~~a~~lG~~~v~~~~g~~~~------~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~~~~~ 155 (278)
T 1i60_A 83 ITEFKGMMETCKTLGVKYVVAVPLVTEQ------KIVKEEIKKSSVDVLTELSDIAEPYGVK-IALEFVGHPQCTVNTFE 155 (278)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCBCSS------CCCHHHHHHHHHHHHHHHHHHHGGGTCE-EEEECCCCTTBSSCSHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCC------CCCHHHHHHHHHHHHHHHHHHHHhcCCE-EEEEecCCccchhcCHH
Confidence 1234455555555688888774332210 2232 34555666777788888874 55533222 234677
Q ss_pred HHHHHHHHHHHcCCcEEee-cCcccc----cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE
Q 006969 235 FLYEILGEVIKVGATTLNI-PDTVGI----TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 309 (623)
Q Consensus 235 ~l~~~~~~~~~aGa~~I~l-~DTvG~----~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 309 (623)
.+.++++.+ +...+.+ -||.=. ..|.+ + .+.+. +-...+|.||..+.. .|-.
T Consensus 156 ~~~~l~~~~---~~~~~g~~~D~~h~~~~g~d~~~---~----~~~~~---~~i~~vHl~D~~~~~---------~g~~- 212 (278)
T 1i60_A 156 QAYEIVNTV---NRDNVGLVLDSFHFHAMGSNIES---L----KQADG---KKIFIYHIDDTEDFP---------IGFL- 212 (278)
T ss_dssp HHHHHHHHH---CCTTEEEEEEHHHHHHTTCCHHH---H----HTSCG---GGEEEEEECEECCCC---------TTTC-
T ss_pred HHHHHHHHh---CCCCeeEEEEeEEEeecCCCHHH---H----HhcCc---ceEEEEEecCCCCCC---------ccch-
Confidence 777777665 3322322 254211 12322 2 22232 134688998865431 0100
Q ss_pred EEeccCCccCccCcccHHHHHHHHHhcc
Q 006969 310 VEVTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 310 Vd~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
.+.--.-+|+ |..+.++++..|+..+
T Consensus 213 ~~~~~~~~G~--G~id~~~~~~~L~~~g 238 (278)
T 1i60_A 213 TDEDRVWPGQ--GAIDLDAHLSALKEIG 238 (278)
T ss_dssp CGGGEESTTS--SSSCHHHHHHHHHHTT
T ss_pred hhccCCCCCC--CCCcHHHHHHHHHHcC
Confidence 0000012444 8899999999999765
No 179
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=87.86 E-value=27 Score=36.05 Aligned_cols=114 Identities=18% Similarity=0.167 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEEcccCC---------CCCCHHHHHHHHHHHHHcCCcEEeec-Ccccc-c-CHHHHHH
Q 006969 200 QQVVEIARSMVKFARSLGCDDVEFSPEDA---------GRSDRKFLYEILGEVIKVGATTLNIP-DTVGI-T-MPTEFGK 267 (623)
Q Consensus 200 ee~l~~~~~~v~~ak~~G~~~V~f~~eda---------~r~d~e~l~~~~~~~~~aGa~~I~l~-DTvG~-~-~P~~v~~ 267 (623)
+...+.+.+++++|++.|+. +.+-+.+. .-.+++.+.++++.+ +...+.++ ||.=. . .-....+
T Consensus 194 ~~~~~~l~~l~~~A~~~Gv~-l~lE~~~~~~~~~g~~~~~~t~~~~~~l~~~v---~~~~vgl~~D~~h~~~~~g~d~~~ 269 (367)
T 1tz9_A 194 ENLRYFLERVIPVCEEENIK-MGIHPDDPPWEIFGLPRITKNLADLKRILSLV---DSPANGITFCTGSLGADPTNDLPT 269 (367)
T ss_dssp HHHHHHHHHHHHHHHHHTCE-EEECCCSSSSCBTTBCCCTTSHHHHHHHHHHT---CSTTEECCEETTHHHHSTTSCHHH
T ss_pred HHHHHHHHHHHHHHHHhCCE-EEEEECCCcccccCCCcccCCHHHHHHHHHhc---CCCCEEEEEecCchhhhcCCCHHH
Confidence 44556667788889999984 66644321 123566666666543 44333333 66433 1 2223455
Q ss_pred HHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcc
Q 006969 268 LIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 268 li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
.++.+..++ ..+|.+|.... .+-...+..-.+ +.|..+..+++..|+..+
T Consensus 270 ~i~~~~~rI-------~~vHlkD~~~~----------~~~~~~~~~~~~---G~G~id~~~il~~L~~~g 319 (367)
T 1tz9_A 270 MIREIGHRI-------NFVHFRNVKYL----------GEHRFEETAHPS---VAGSLDMAELMQALVDVG 319 (367)
T ss_dssp HHHHHGGGC-------CCEEECCEEEC----------SSSEEEECCSSG---GGSSSCHHHHHHHHHHHT
T ss_pred HHHHHhhhE-------EEEEEecCCCC----------CCCccccccCCC---CCCCcCHHHHHHHHHHcC
Confidence 555555444 47888886421 011122221111 358899999999998764
No 180
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=87.69 E-value=25 Score=35.47 Aligned_cols=194 Identities=12% Similarity=0.141 Sum_probs=115.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+
T Consensus 18 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la- 89 (292)
T 2ojp_A 18 NVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLAD-------GRIPVIAGTGANATAEAISLT- 89 (292)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCccHHHHHHHH-
Confidence 478888889999999999999987 3 455666665 55555555542 2357888887655444 4443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~aG 247 (623)
+....+|++.+-+..|-. .+.|.++.++-..+..+ ..++..+-|+ |. .+...+++.+.+++ + -
T Consensus 90 ~~a~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 154 (292)
T 2ojp_A 90 QRFNDSGIVGCLTVTPYY-------NRPSQEGLYQHFKAIAE---HTDLPQILYNVPSRTGCDLLPETVGRLA----K-V 154 (292)
T ss_dssp HHTTTSSCSEEEEECCCS-------SCCCHHHHHHHHHHHHT---TCSSCEEEECCHHHHSCCCCHHHHHHHH----T-S
T ss_pred HHHHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCcchhccCCCHHHHHHHH----c-C
Confidence 334567999887765532 23466666665554433 2345545554 32 23356777776664 3 2
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|- ..++.+++ +..++ +..+ +-.++++ .+.++..|++.+ +.| .+|...+
T Consensus 155 pnivgiK~s~gd--~~~~~~~~----~~~~~--~f~v-~~G~d~~------~~~~l~~G~~G~---is~----~~n~~P~ 212 (292)
T 2ojp_A 155 KNIIGIXEATGN--LTRVNQIK----ELVSD--DFVL-LSGDDAS------ALDFMQYGGHGV---ISV----TANVAAR 212 (292)
T ss_dssp TTEEEC-CCSCC--THHHHHHH----TTSCT--TSBC-EESCGGG------HHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEeCCCCC--HHHHHHHH----HhcCC--CEEE-EECcHHH------HHHHHHCCCcEE---EeC----HHHhhHH
Confidence 579999999985 33444443 33332 1222 3344432 456778898654 333 4677777
Q ss_pred HHHHHHHh
Q 006969 328 EVVMAFKC 335 (623)
Q Consensus 328 evv~~L~~ 335 (623)
.++...+.
T Consensus 213 ~~~~l~~a 220 (292)
T 2ojp_A 213 DMAQMCKL 220 (292)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76655543
No 181
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=87.66 E-value=1.6 Score=45.31 Aligned_cols=81 Identities=20% Similarity=0.273 Sum_probs=52.9
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeec--Cc---ccccCHHHHHHH---HHHHHHhCCCCcceeEEEeecCCcchHHH
Q 006969 227 DAGRS-DRKFLYEILGEVIKVGATTLNIP--DT---VGITMPTEFGKL---IADIKANTPGIENVVISTHCQNDLGLSTA 297 (623)
Q Consensus 227 da~r~-d~e~l~~~~~~~~~aGa~~I~l~--DT---vG~~~P~~v~~l---i~~l~~~~~~~~~v~i~~H~HND~GlAvA 297 (623)
|+++. +++.+++.++..++.||+.|-+. -| ......+|+.++ |+.+++.+|+ ++|++=+=+ -.
T Consensus 57 dgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~---vpISIDT~~-----~~ 128 (318)
T 2vp8_A 57 DKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPD---QLISVDTWR-----AQ 128 (318)
T ss_dssp -------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTT---CEEEEECSC-----HH
T ss_pred CCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCC---CeEEEeCCC-----HH
Confidence 56654 67899999999999999999886 12 224445677666 6777877753 789885544 34
Q ss_pred HHHHHHHhCCCEEEeccC
Q 006969 298 NTIAGACAGARQVEVTIN 315 (623)
Q Consensus 298 NslaAv~aGA~~Vd~Tv~ 315 (623)
-+.+|+++||+.|+-.-.
T Consensus 129 VaeaAl~aGa~iINDVsg 146 (318)
T 2vp8_A 129 VAKAACAAGADLINDTWG 146 (318)
T ss_dssp HHHHHHHHTCCEEEETTS
T ss_pred HHHHHHHhCCCEEEECCC
Confidence 456889999999865433
No 182
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=87.52 E-value=17 Score=40.00 Aligned_cols=159 Identities=21% Similarity=0.234 Sum_probs=106.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
.+|.+|+..|.+.-.+.|+|+|=+-|.. +++|...+|.+.+..+.. ..+.+.| . +.+.++..-+.+..+
T Consensus 204 ~lTekD~~Dl~~f~~~~~vD~Ia~SFVr-~a~Dv~~~r~~l~~~~~~----~~iiaKI---E--~~eav~nldeIl~~s- 272 (511)
T 3gg8_A 204 VIGEKDKHDILNFGIPMGCNFIAASFVQ-SADDVRYIRGLLGPRGRH----IRIIPKI---E--NVEGLVNFDEILAEA- 272 (511)
T ss_dssp SSCHHHHHHHHHTTTTTTCCEEEETTCC-SHHHHHHHHHHHTGGGTT----CEEEEEE---C--SHHHHHTHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCC-CHHHHHHHHHHHHhcCCC----CeEEEEE---C--CHHHHHhHHHHHHhC-
Confidence 4688899888777888999999998874 677877777766543211 0122222 1 334443221222222
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------cccCCCCCCHHHHHHHHHHHHHcCCcE
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGATT 250 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~~eda~r~d~e~l~~~~~~~~~aGa~~ 250 (623)
+. ++++-.|+=++ +..+++...-+.+++.|+.+|+. |.+ |.....+-....+.+++.++.+ |+|.
T Consensus 273 -Dg--imVaRGDLgve----i~~e~v~~~qk~ii~~~~~~gkp-vi~ATQmLeSMi~~p~PTRAEvsDVAnAV~d-GaDa 343 (511)
T 3gg8_A 273 -DG--IMIARGDLGME----IPPEKVFLAQKMMIAKCNVVGKP-VITATQMLESMIKNPRPTRAEAADVANAVLD-GTDC 343 (511)
T ss_dssp -SC--EEEEHHHHHHH----SCHHHHHHHHHHHHHHHHHTTCC-EEEESSSSGGGGTCSSCCHHHHHHHHHHHHH-TCSE
T ss_pred -Ce--EEEecchhcCc----CCHHHHHHHHHHHHHHHHHcCCC-eEEehHHHHHhhcCCCccHHHHHHHHHHHHh-CCCE
Confidence 33 44555554443 35788888889999999999986 555 2334556677888888888765 9999
Q ss_pred Eeec-CcccccCHHHHHHHHHHHHHh
Q 006969 251 LNIP-DTVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 251 I~l~-DTvG~~~P~~v~~li~~l~~~ 275 (623)
|.|. .|.-...|.+.-+.+..+...
T Consensus 344 vMLSgETA~G~yPveaV~~M~~I~~~ 369 (511)
T 3gg8_A 344 VMLSGETANGEFPVITVETMARICYE 369 (511)
T ss_dssp EEESHHHHTCSCHHHHHHHHHHHHHH
T ss_pred EEecccccCCCCHHHHHHHHHHHHHH
Confidence 9995 687788999887777776654
No 183
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=87.37 E-value=26 Score=35.30 Aligned_cols=224 Identities=17% Similarity=0.153 Sum_probs=134.3
Q ss_pred ceEEEeCCCcccCCCCCCCC---CHHHHHHHHHHHhHcCCCEEEEe---cCCCCh-hH-HHHHHHHHHHhccccccCCCc
Q 006969 79 YVRVFDTTLRDGEQSPGATL---TSKEKLDIARQLAKLGVDIIEAG---FPAASK-ED-FEAVRTIAKEVGNAVDAESGY 150 (623)
Q Consensus 79 ~v~I~DtTLRDG~Q~~g~~~---t~e~Kl~Ia~~L~~~Gvd~IEvG---fP~~s~-~d-~e~v~~i~~~~~~~~~~~~~l 150 (623)
.|.|-++++-+|.-..-+++ +.++.+..++.+...|+|.||.= |....+ ++ .+.++.+.+..+.
T Consensus 27 ~v~v~~~~~g~g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~-------- 98 (276)
T 3o1n_A 27 TVTVRDLVVGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITD-------- 98 (276)
T ss_dssp CEEETTEEETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCS--------
T ss_pred EEEECCEEeCCCCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCC--------
Confidence 47788888888764433333 56777777888888999999994 222222 22 2334444443211
Q ss_pred cceEEeecccchhh---------HHHHHHHHhcCC-CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCe
Q 006969 151 VPVICGLSRCNERD---------IKTAWEAVKYAK-RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD 220 (623)
Q Consensus 151 ~~~i~~~~r~~~~d---------I~~a~eal~~a~-~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~ 220 (623)
.|.|..+ |...++ --..++.+...| .+.|.+-....+ +.+.+.++.+++.|.+
T Consensus 99 ~PiI~T~-Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~---------------~~~~~l~~~a~~~~~k- 161 (276)
T 3o1n_A 99 KPLLFTF-RSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGD---------------DEVKATVGYAHQHNVA- 161 (276)
T ss_dssp SCEEEEC-CBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGGCH---------------HHHHHHHHHHHHTTCE-
T ss_pred CCEEEEE-EEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcCCH---------------HHHHHHHHHHHhCCCE-
Confidence 2445433 433221 111122222235 678887554332 2345677788888875
Q ss_pred EEEcccCCCCC-CHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHH---HhCCCCcceeEEEeecCCcchHH
Q 006969 221 VEFSPEDAGRS-DRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIK---ANTPGIENVVISTHCQNDLGLST 296 (623)
Q Consensus 221 V~f~~eda~r~-d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~---~~~~~~~~v~i~~H~HND~GlAv 296 (623)
|..|--|...+ +.+.+.+.++.+.+.|||.+-|+=+ .-.+.++.++..... +..++ .|+-.- |--.+|.
T Consensus 162 vI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIvKia~~--a~s~~Dvl~Ll~~~~~~~~~~~~---~PlIa~--~MG~~G~ 234 (276)
T 3o1n_A 162 VIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVM--PQTKADVLTLLTATVEMQERYAD---RPIITM--SMSKTGV 234 (276)
T ss_dssp EEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEEC--CSSHHHHHHHHHHHHHHHHHTCC---SCCEEE--ECSGGGT
T ss_pred EEEEeecCCCCcCHHHHHHHHHHHHHcCCCEEEEEec--CCChHHHHHHHHHHHHHHhcCCC---CCEEEE--ECCCchh
Confidence 65554444433 3578889999999999999999743 345667777766543 33332 344433 3334445
Q ss_pred HHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 297 ANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 297 ANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
-.-+.+-..|--...+++ |--...|..+++++-..|..
T Consensus 235 ~SRi~~~~~GS~vTf~~l-~~~sAPGQl~~~~l~~~l~~ 272 (276)
T 3o1n_A 235 ISRLAGEVFGSAATFGAV-KKASAPGAISVADLRTVLTI 272 (276)
T ss_dssp HHHHCHHHHTCCEEECBS-SCCSSTTCCBHHHHHHHHHH
T ss_pred hHHHHHHHhCCceEecCC-CCCCCCCCCCHHHHHHHHHH
Confidence 555666667888888887 44457899999998877764
No 184
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=87.29 E-value=1.8 Score=44.55 Aligned_cols=106 Identities=16% Similarity=0.104 Sum_probs=82.4
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 298 (623)
.|.+ .+..|.+-+.++++.+++.|++.|.++-|+| .++++|-.++++.+.+...+ ++++-+|+ +|+.--++..
T Consensus 17 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--rvpViaGvg~~~t~~ai~l 94 (311)
T 3h5d_A 17 TPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNG--RVPLIAGVGTNDTRDSIEF 94 (311)
T ss_dssp CCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCS--SSCEEEECCCSSHHHHHHH
T ss_pred cCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCcCHHHHHHH
Confidence 4543 3578999999999999999999999999999 57999999999999998765 46666665 7888889999
Q ss_pred HHHHHHhCC-CEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 299 TIAGACAGA-RQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 299 slaAv~aGA-~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+..|-++|+ +.+=..---+-. .+-++++..++.
T Consensus 95 a~~A~~~Ga~davlv~~P~y~~----~s~~~l~~~f~~ 128 (311)
T 3h5d_A 95 VKEVAEFGGFAAGLAIVPYYNK----PSQEGMYQHFKA 128 (311)
T ss_dssp HHHHHHSCCCSEEEEECCCSSC----CCHHHHHHHHHH
T ss_pred HHHHHhcCCCcEEEEcCCCCCC----CCHHHHHHHHHH
Confidence 999999997 988665433321 244556655543
No 185
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=87.22 E-value=2.1 Score=44.27 Aligned_cols=106 Identities=14% Similarity=0.095 Sum_probs=83.0
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 298 (623)
.|.+ .+..|.+-+.++++.+++.|++.|.++-|+|= ++++|-.++++.+.+...+ +++|-+|+ +|+.--++..
T Consensus 34 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~~t~~ai~l 111 (315)
T 3na8_A 34 TPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAH--RVPTIVSVSDLTTAKTVRR 111 (315)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSHHHHHHH
T ss_pred CcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHHHHHH
Confidence 5543 45789999999999999999999999999995 5889999999999887655 35666665 6889999999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+..|-++||+.+=..---+-. .+-++++..++.
T Consensus 112 a~~A~~~Gadavlv~~P~y~~----~s~~~l~~~f~~ 144 (315)
T 3na8_A 112 AQFAESLGAEAVMVLPISYWK----LNEAEVFQHYRA 144 (315)
T ss_dssp HHHHHHTTCSEEEECCCCSSC----CCHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCCC----CCHHHHHHHHHH
Confidence 999999999998775443322 345666655543
No 186
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=87.17 E-value=24 Score=36.50 Aligned_cols=195 Identities=10% Similarity=0.074 Sum_probs=117.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 51 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~-------grvpViaGvg~~st~eai~la~ 123 (332)
T 2r8w_A 51 RVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILR-------GRRTLMAGIGALRTDEAVALAK 123 (332)
T ss_dssp CBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEEECCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHHH
Confidence 478888899999999999999987 3 455666665 55555555543 3357888888655444 44432
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~aG 247 (623)
. ...+|++.+-+..|-. .+.|.+++++-..+..+. .++..+-|+ |. .+...+++.+.++++ -
T Consensus 124 ~-A~~~Gadavlv~~P~Y-------~~~s~~~l~~~f~~VA~a---~~lPiilYn~P~~tg~~l~~e~~~~La~-----~ 187 (332)
T 2r8w_A 124 D-AEAAGADALLLAPVSY-------TPLTQEEAYHHFAAVAGA---TALPLAIYNNPTTTRFTFSDELLVRLAY-----I 187 (332)
T ss_dssp H-HHHHTCSEEEECCCCS-------SCCCHHHHHHHHHHHHHH---CSSCEEEECCHHHHCCCCCHHHHHHHHT-----S
T ss_pred H-HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHh---cCCCEEEEeCccccCcCCCHHHHHHHHc-----C
Confidence 2 3446899887655532 245777766665554432 345545564 32 233567777766653 2
Q ss_pred CcEEeecCcccccC--HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCccc
Q 006969 248 ATTLNIPDTVGITM--PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNAS 325 (623)
Q Consensus 248 a~~I~l~DTvG~~~--P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~ 325 (623)
...+.+.|+.|-.. ..++.+++ +..++ + +.+=+=+| ...+.++..|++.+ +.| .+|+.
T Consensus 188 pnIvgiKdssgd~~~~~~~~~~l~----~~~~~--~--f~v~~G~D-----~~~l~~l~~G~~G~---is~----~anv~ 247 (332)
T 2r8w_A 188 PNIRAIKMPLPADADYAGELARLR----PKLSD--D--FAIGYSGD-----WGCTDATLAGGDTW---YSV----VAGLL 247 (332)
T ss_dssp TTEEEEEECCCTTCCHHHHHHHHT----TTSCT--T--CEEEECCH-----HHHHHHHHTTCSEE---EES----GGGTC
T ss_pred CCEEEEEeCCCCchhHHHHHHHHH----HhcCC--C--EEEEeCch-----HHHHHHHHCCCCEE---EeC----HHHhC
Confidence 57999999997422 33444433 33432 1 22222222 35678888998754 333 45676
Q ss_pred HHHHHHHHH
Q 006969 326 LEEVVMAFK 334 (623)
Q Consensus 326 lEevv~~L~ 334 (623)
.+.++...+
T Consensus 248 P~~~~~l~~ 256 (332)
T 2r8w_A 248 PVPALQLMR 256 (332)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 766665444
No 187
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=87.12 E-value=5.8 Score=41.69 Aligned_cols=129 Identities=14% Similarity=0.132 Sum_probs=82.4
Q ss_pred HHhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC--eEEEcccCC------CCC
Q 006969 171 AVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD--DVEFSPEDA------GRS 231 (623)
Q Consensus 171 al~~a~~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~--~V~f~~eda------~r~ 231 (623)
..+.+|.+.|.|-.+. |+. ++...+|-+.+.-.+.+.+.++.+|+. |-+ .|.+++.+. ...
T Consensus 169 ~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~ 248 (364)
T 1vyr_A 169 NAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPN 248 (364)
T ss_dssp HHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTT
T ss_pred HHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCCC
Confidence 3456899999987653 121 122345667777777788888887765 311 244577531 244
Q ss_pred CHHHHHHHHHHHHHcCCcEEeecCc-c--cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-C
Q 006969 232 DRKFLYEILGEVIKVGATTLNIPDT-V--GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-A 307 (623)
Q Consensus 232 d~e~l~~~~~~~~~aGa~~I~l~DT-v--G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A 307 (623)
+.+...++++.+.++|++.|.+... . +...| .++++.+++.++ +||..=. +. -..++..+++.| |
T Consensus 249 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~---~~~~~~v~~~~~----iPvi~~G--gi--t~~~a~~~l~~g~a 317 (364)
T 1vyr_A 249 EEADALYLIEELAKRGIAYLHMSETDLAGGKPYS---EAFRQKVRERFH----GVIIGAG--AY--TAEKAEDLIGKGLI 317 (364)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCC---HHHHHHHHHHCC----SEEEEES--SC--CHHHHHHHHHTTSC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCcccCCCccc---HHHHHHHHHHCC----CCEEEEC--Cc--CHHHHHHHHHCCCc
Confidence 6778889999999999999998652 1 01123 246778888874 3444322 22 267778888888 8
Q ss_pred CEE
Q 006969 308 RQV 310 (623)
Q Consensus 308 ~~V 310 (623)
+.|
T Consensus 318 D~V 320 (364)
T 1vyr_A 318 DAV 320 (364)
T ss_dssp SEE
T ss_pred cEE
Confidence 876
No 188
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=87.04 E-value=28 Score=35.38 Aligned_cols=191 Identities=13% Similarity=0.144 Sum_probs=114.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.||+-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+
T Consensus 32 ~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la- 103 (304)
T 3l21_A 32 SLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG-------DRARVIAGAGTYDTAHSIRLA- 103 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TTSEEEEECCCSCHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-------CCCeEEEeCCCCCHHHHHHHH-
Confidence 478899999999999999999877 3 355556665 55555555543 3357888877555444 3433
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc--CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e--da~r~d~e~l~~~~~~~~~aG 247 (623)
+....+|++.+-+..|-. ++-|.+++++-..+..+. .++..+-|+.- .+...+++.+.+++ + -
T Consensus 104 ~~a~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 168 (304)
T 3l21_A 104 KACAAEGAHGLLVVTPYY-------SKPPQRGLQAHFTAVADA---TELPMLLYDIPGRSAVPIEPDTIRALA----S-H 168 (304)
T ss_dssp HHHHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHTS---CSSCEEEEECHHHHSSCCCHHHHHHHH----T-S
T ss_pred HHHHHcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHh---cCCCEEEEeCccccCCCCCHHHHHHHh----c-C
Confidence 333456899887765542 234666655544443333 25554455432 24456777776655 3 3
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.| ...++.+++. . ++ ..+ +-++++ ..+.++.+|++.+ +.+ .+|...+
T Consensus 169 pnIvgiKdssg--d~~~~~~~~~--~---~~---f~v-~~G~d~------~~l~~l~~Ga~G~---is~----~~n~~P~ 224 (304)
T 3l21_A 169 PNIVGVXDAKA--DLHSGAQIMA--D---TG---LAY-YSGDDA------LNLPWLRMGATGF---ISV----IAHLAAG 224 (304)
T ss_dssp TTEEEEEECSC--CHHHHHHHHH--H---HC---CEE-EESSGG------GHHHHHHHTCCEE---EES----THHHHHH
T ss_pred CCEEEEECCCC--CHHHHHHHhc--C---CC---eEE-EeCchH------HHHHHHHcCCCEE---Eec----HHhhhHH
Confidence 47999999998 4566666661 2 22 122 333332 2456788898754 332 4677776
Q ss_pred HHHHHHH
Q 006969 328 EVVMAFK 334 (623)
Q Consensus 328 evv~~L~ 334 (623)
.++...+
T Consensus 225 ~~~~l~~ 231 (304)
T 3l21_A 225 QLRELLS 231 (304)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655544
No 189
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=87.02 E-value=1.5 Score=46.82 Aligned_cols=155 Identities=14% Similarity=0.140 Sum_probs=96.4
Q ss_pred CCHHHHHHHHHHHhHcCCCEE-------------------EEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeec
Q 006969 98 LTSKEKLDIARQLAKLGVDII-------------------EAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS 158 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~I-------------------EvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~ 158 (623)
++.+.-..+.+...+.|+..+ -+|..- -.+++.++.+++. + .|.+..-+
T Consensus 190 l~~egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~lkIgs~~--~~n~~LL~~~a~~---------g-kPVilk~G 257 (385)
T 3nvt_A 190 LGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDYVDVIQIGARN--MQNFELLKAAGRV---------D-KPILLKRG 257 (385)
T ss_dssp CTHHHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTTCSEEEECGGG--TTCHHHHHHHHTS---------S-SCEEEECC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhhCCEEEECccc--ccCHHHHHHHHcc---------C-CcEEEecC
Confidence 445665666666667886655 222211 1234556655542 1 25665555
Q ss_pred c-cchhhHHHHHHHHhcCCCCEEEEEec-CCHH--HHHHHhCCCHHHHHHHHHHHHHHHHH-cCCCeEEEcccCCCCCCH
Q 006969 159 R-CNERDIKTAWEAVKYAKRPRIHTFIA-TSGI--HMEHKLRKTKQQVVEIARSMVKFARS-LGCDDVEFSPEDAGRSDR 233 (623)
Q Consensus 159 r-~~~~dI~~a~eal~~a~~~~v~i~~~-~Sd~--h~~~~l~~t~ee~l~~~~~~v~~ak~-~G~~~V~f~~eda~r~d~ 233 (623)
. +..+++..|++.+...|.+.|.+.-- +|.. .-...+++. ++...|+ .|+. |.+++.- +--++
T Consensus 258 ~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~----------~i~~lk~~~~lp-V~~D~th-~~G~r 325 (385)
T 3nvt_A 258 LSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDIS----------AVPILKKETHLP-VMVDVTH-STGRK 325 (385)
T ss_dssp TTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTT----------HHHHHHHHBSSC-EEEEHHH-HHCCG
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHH----------HHHHHHHhcCCC-EEEcCCC-CCCcc
Confidence 5 68899999999998888876666532 3321 000112221 2333444 5776 7554421 12245
Q ss_pred HHHHHHHHHHHHcCCc--EE--------eecCcccccCHHHHHHHHHHHHHhC
Q 006969 234 KFLYEILGEVIKVGAT--TL--------NIPDTVGITMPTEFGKLIADIKANT 276 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~--~I--------~l~DTvG~~~P~~v~~li~~l~~~~ 276 (623)
+++..++.+++.+||+ .| .++|--=.+.|.++.++++.+++-.
T Consensus 326 ~~v~~~a~AAvA~GA~gl~iE~H~~pd~a~~D~~~sl~p~el~~lv~~i~~i~ 378 (385)
T 3nvt_A 326 DLLLPCAKAALAIEADGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAILASN 378 (385)
T ss_dssp GGHHHHHHHHHHTTCSEEEEEBCSCGGGCSSCTTTSBCHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHhCCCEEEEEecCChhhcCCcccccCCHHHHHHHHHHHHHHH
Confidence 7888899999999999 44 4589999999999999999999754
No 190
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=86.93 E-value=2.2 Score=43.37 Aligned_cols=155 Identities=14% Similarity=0.221 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHhHcCCCEEEEec-CC----------------CChhHHHHHHHHHHHhccccccCCCccceEEeeccc-c
Q 006969 100 SKEKLDIARQLAKLGVDIIEAGF-PA----------------ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-N 161 (623)
Q Consensus 100 ~e~Kl~Ia~~L~~~Gvd~IEvGf-P~----------------~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~ 161 (623)
.+.-..+.+...++|+..+---| |. ..=.++..++.+++. + .|++.--+.. .
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~~kIgs~~~~n~~ll~~~a~~-~---------kPV~lk~G~~~t 157 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRYADMLQIGARNMQNFPLLREVGRS-G---------KPVLLKRGFGNT 157 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHHH-T---------CCEEEECCTTCC
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHhCCeEEECcccccCHHHHHHHHcc-C---------CeEEEcCCCCCC
Confidence 44444555555678877663322 11 111234556666543 1 1555544543 6
Q ss_pred hhhHHHHHHHHhcCCCCEEEEEe-cCCHHHHHHHh-CCCHHHHHHHHHHHHHHHHHc-CCCeEEEcccCCCCCCHHHHHH
Q 006969 162 ERDIKTAWEAVKYAKRPRIHTFI-ATSGIHMEHKL-RKTKQQVVEIARSMVKFARSL-GCDDVEFSPEDAGRSDRKFLYE 238 (623)
Q Consensus 162 ~~dI~~a~eal~~a~~~~v~i~~-~~Sd~h~~~~l-~~t~ee~l~~~~~~v~~ak~~-G~~~V~f~~eda~r~d~e~l~~ 238 (623)
..+++.|++.++..|.+.|++.- .++. + +.++ +.++ ..++...|+. |+. |.+.+ |=+....+++..
T Consensus 158 ~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~------yp~y~~-~~vd--l~~i~~lk~~~~lp-Vi~ds-sH~~g~~~~~~~ 226 (276)
T 1vs1_A 158 VEELLAAAEYILLEGNWQVVLVERGIRT------FEPSTR-FTLD--VAAVAVLKEATHLP-VIVDP-SHPAGRRSLVPA 226 (276)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCBCC------SCCSSS-SBCB--HHHHHHHHHHBSSC-EEECC-HHHHCSGGGHHH
T ss_pred HHHHHHHHHHHHHcCCCeEEEEeCCcCC------CCCcCc-chhC--HHHHHHHHHHhCCC-EEEeC-CCCCCccchHHH
Confidence 78999999999888887777754 3321 0 0011 1111 1233444553 776 65544 222344567888
Q ss_pred HHHHHHHcCCc--EEe--------ecCcccccCHHHHHHHHHHHHHh
Q 006969 239 ILGEVIKVGAT--TLN--------IPDTVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 239 ~~~~~~~aGa~--~I~--------l~DTvG~~~P~~v~~li~~l~~~ 275 (623)
+..+++.+||+ .|- ++|-.=.+.|+++.++++.+++.
T Consensus 227 ~~~aAva~Ga~Gl~IE~H~~~d~a~~D~~~sl~p~~~~~lv~~i~~~ 273 (276)
T 1vs1_A 227 LAKAGLAAGADGLIVEVHPNPEEALSDAKQQLTPGEFARLMGELRWH 273 (276)
T ss_dssp HHHHHHHTTCSEEEEEBCSSGGGCSSCGGGCBCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEEecCCcccCCCchhcCCCHHHHHHHHHHHHHH
Confidence 88888999998 332 36988999999999999999863
No 191
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=86.87 E-value=1.8 Score=44.44 Aligned_cols=77 Identities=17% Similarity=0.223 Sum_probs=55.7
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeec--Cc----ccccCHHHHHHHH---HHHHHhCCCCcceeEEEeecCCcchHH
Q 006969 227 DAGRS-DRKFLYEILGEVIKVGATTLNIP--DT----VGITMPTEFGKLI---ADIKANTPGIENVVISTHCQNDLGLST 296 (623)
Q Consensus 227 da~r~-d~e~l~~~~~~~~~aGa~~I~l~--DT----vG~~~P~~v~~li---~~l~~~~~~~~~v~i~~H~HND~GlAv 296 (623)
|+++. +++.+.+.++..++.||+.|-+. -| ......+++.+++ +.+++.+ +++|++.+.+ -
T Consensus 55 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~----~vpiSIDT~~-----~ 125 (297)
T 1tx2_A 55 DGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV----KLPISIDTYK-----A 125 (297)
T ss_dssp SSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS----CSCEEEECSC-----H
T ss_pred cCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC----CceEEEeCCC-----H
Confidence 45543 67899999999999999998876 22 2233457777666 6667655 3689998875 4
Q ss_pred HHHHHHHHhCCCEEEe
Q 006969 297 ANTIAGACAGARQVEV 312 (623)
Q Consensus 297 ANslaAv~aGA~~Vd~ 312 (623)
.-..+|+++|++.|+-
T Consensus 126 ~V~~aAl~aGa~iINd 141 (297)
T 1tx2_A 126 EVAKQAIEAGAHIIND 141 (297)
T ss_dssp HHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 4556888899999954
No 192
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=86.58 E-value=27 Score=34.73 Aligned_cols=225 Identities=16% Similarity=0.147 Sum_probs=131.1
Q ss_pred CceEEEeCCCcccCCCCCC---CCCHHHHHHHHHHHhHcCCCEEEEec-CCCChhHHH----HHHHHHHHhccccccCCC
Q 006969 78 NYVRVFDTTLRDGEQSPGA---TLTSKEKLDIARQLAKLGVDIIEAGF-PAASKEDFE----AVRTIAKEVGNAVDAESG 149 (623)
Q Consensus 78 ~~v~I~DtTLRDG~Q~~g~---~~t~e~Kl~Ia~~L~~~Gvd~IEvGf-P~~s~~d~e----~v~~i~~~~~~~~~~~~~ 149 (623)
+.|+|-++++=+|.----+ .=+.++.++-++.+...|+|.||.=. .-....+.+ .+..+.+..++
T Consensus 6 ~~v~v~~~~ig~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~------- 78 (258)
T 4h3d_A 6 RKVQVKNITIGEGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHD------- 78 (258)
T ss_dssp CCEEETTEEETSSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTT-------
T ss_pred ceEEEcCEEeCCCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCC-------
Confidence 3467777777666532122 23678888888889999999999952 111122233 33344433211
Q ss_pred ccceEEeecccchhh---------HHHHHHHHhcCC-CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC
Q 006969 150 YVPVICGLSRCNERD---------IKTAWEAVKYAK-RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD 219 (623)
Q Consensus 150 l~~~i~~~~r~~~~d---------I~~a~eal~~a~-~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~ 219 (623)
.|.|.. .|+..++ -...++.+...+ ++.|.+-....+ +...+.++.+++.|.+
T Consensus 79 -lPiI~T-~Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~---------------~~~~~l~~~a~~~~~k 141 (258)
T 4h3d_A 79 -IPLLFT-FRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGD---------------EVIDEVVNFAHKKEVK 141 (258)
T ss_dssp -SCEEEE-CCCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGGCH---------------HHHHHHHHHHHHTTCE
T ss_pred -CCEEEE-EechhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhhccH---------------HHHHHHHHHHHhCCCE
Confidence 255544 3554332 111122222233 678887665443 2334677888888875
Q ss_pred eEEEcccCCCCC-CHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHH---HHhCCCCcceeEEEeecCCcchH
Q 006969 220 DVEFSPEDAGRS-DRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADI---KANTPGIENVVISTHCQNDLGLS 295 (623)
Q Consensus 220 ~V~f~~eda~r~-d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l---~~~~~~~~~v~i~~H~HND~GlA 295 (623)
|..|--|...+ +.+.+.+.++.+.+.|||.+-|+=+. -.+.++.+++... ++..++ .|+-.-+=-. +|
T Consensus 142 -iI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIvKia~~~--~~~~D~l~Ll~~~~~~~~~~~~---~P~I~~~MG~--~G 213 (258)
T 4h3d_A 142 -VIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMP--QNEKDVLVLLEATNEMFKIYAD---RPIITMSMSG--MG 213 (258)
T ss_dssp -EEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHTCS---SCBEEEECTG--GG
T ss_pred -EEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEEEcc--CCHHHHHHHHHHHHHHHHhcCC---CCEEEEeCCC--CC
Confidence 76666665555 35788899999999999999887443 3566666666544 333443 3344333222 23
Q ss_pred HHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 296 TANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 296 vANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
.-.=+.+-..|--...+++ |-....|..+++++-..|+.
T Consensus 214 ~~SRi~~~~fGS~lTf~~~-~~~sAPGQl~~~el~~~l~l 252 (258)
T 4h3d_A 214 VISRLCGEIFGSALTFGAA-KSVSAPGQISFKELNSVLNL 252 (258)
T ss_dssp GGGGTCHHHHCBCEEECBC-C---CTTCCBHHHHHHHHHH
T ss_pred hHHHHHHHHhCCceEeccC-CCCCCCCCCCHHHHHHHHHH
Confidence 3333455566777777775 33457899999998877775
No 193
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=86.57 E-value=1.6 Score=44.68 Aligned_cols=106 Identities=13% Similarity=0.138 Sum_probs=81.8
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvAN 298 (623)
.|.+ .++.|.+-+.++++.+++.|++.|.++-|+|= ++.+|-.++++.+.+...+ +++|-+++ +|+.--++..
T Consensus 14 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~l 91 (300)
T 3eb2_A 14 SPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQR--RVPVVAGVASTSVADAVAQ 91 (300)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCBEEEEEESSHHHHHHH
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCHHHHHHH
Confidence 4442 35789999999999999999999999999995 7899999999999887655 35555554 7889999999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+..|-++||+.+=..---+-. .+-++++..++.
T Consensus 92 a~~a~~~Gadavlv~~P~y~~----~~~~~l~~~f~~ 124 (300)
T 3eb2_A 92 AKLYEKLGADGILAILEAYFP----LKDAQIESYFRA 124 (300)
T ss_dssp HHHHHHHTCSEEEEEECCSSC----CCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCCCCC----CCHHHHHHHHHH
Confidence 999999999998665433321 345555555543
No 194
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=86.51 E-value=5.5 Score=39.07 Aligned_cols=161 Identities=15% Similarity=0.161 Sum_probs=89.9
Q ss_pred HHHHHHHhHcCCCEEEE-----ec-CCCChhHHHHHHHHHHHh-ccccccCCCccceEEeecccch-hhHHHHHHHHhcC
Q 006969 104 LDIARQLAKLGVDIIEA-----GF-PAASKEDFEAVRTIAKEV-GNAVDAESGYVPVICGLSRCNE-RDIKTAWEAVKYA 175 (623)
Q Consensus 104 l~Ia~~L~~~Gvd~IEv-----Gf-P~~s~~d~e~v~~i~~~~-~~~~~~~~~l~~~i~~~~r~~~-~dI~~a~eal~~a 175 (623)
-+-++.|.++|.|++-+ -| |.-+- -.+.++.|.+.. .+. +--+-+--.++ +-++.+.+ +
T Consensus 20 ~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~-G~~~v~~ir~~~~~~~--------~~dvhLmv~~p~~~i~~~~~----a 86 (228)
T 3ovp_A 20 GAECLRMLDSGADYLHLDVMDGHFVPNITF-GHPVVESLRKQLGQDP--------FFDMHMMVSKPEQWVKPMAV----A 86 (228)
T ss_dssp HHHHHHHHHTTCSCEEEEEEBSSSSSCBCB-CHHHHHHHHHHHCSSS--------CEEEEEECSCGGGGHHHHHH----H
T ss_pred HHHHHHHHHcCCCEEEEEecCCCcCccccc-CHHHHHHHHHhhCCCC--------cEEEEEEeCCHHHHHHHHHH----c
Confidence 34456677889986665 34 43321 234677776653 211 11111111222 23454444 4
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE--cccCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF--SPEDAGRSDRKFLYEILGEVIKVGATTLNI 253 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f--~~eda~r~d~e~l~~~~~~~~~aGa~~I~l 253 (623)
|++.|++-.-..+ .+.+.++.+|++|++ +.+ +| .++.+.+.+++. .+|.|.+
T Consensus 87 Gad~itvH~Ea~~----------------~~~~~i~~i~~~G~k-~gval~p----~t~~e~l~~~l~-----~~D~Vl~ 140 (228)
T 3ovp_A 87 GANQYTFHLEATE----------------NPGALIKDIRENGMK-VGLAIKP----GTSVEYLAPWAN-----QIDMALV 140 (228)
T ss_dssp TCSEEEEEGGGCS----------------CHHHHHHHHHHTTCE-EEEEECT----TSCGGGTGGGGG-----GCSEEEE
T ss_pred CCCEEEEccCCch----------------hHHHHHHHHHHcCCC-EEEEEcC----CCCHHHHHHHhc-----cCCeEEE
Confidence 9999887543221 234677888899985 444 54 244444444332 3676643
Q ss_pred ----cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 254 ----PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 254 ----~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
|-.-|...-.+.-+.|+.+|+..++ .+|.+ |.|.-..|.-.++++||+.+
T Consensus 141 msv~pGf~Gq~f~~~~l~ki~~lr~~~~~---~~I~V----dGGI~~~t~~~~~~aGAd~~ 194 (228)
T 3ovp_A 141 MTVEPGFGGQKFMEDMMPKVHWLRTQFPS---LDIEV----DGGVGPDTVHKCAEAGANMI 194 (228)
T ss_dssp ESSCTTTCSCCCCGGGHHHHHHHHHHCTT---CEEEE----ESSCSTTTHHHHHHHTCCEE
T ss_pred eeecCCCCCcccCHHHHHHHHHHHHhcCC---CCEEE----eCCcCHHHHHHHHHcCCCEE
Confidence 3333433223344568888887653 44554 56776788999999999986
No 195
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=86.51 E-value=20 Score=36.62 Aligned_cols=193 Identities=15% Similarity=0.188 Sum_probs=112.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-------grvpViaGvg~~~t~~ai~la- 95 (311)
T 3h5d_A 24 SINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVN-------GRVPLIAGVGTNDTRDSIEFV- 95 (311)
T ss_dssp SBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSC-------SSSCEEEECCCSSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCcCHHHHHHHH-
Confidence 366677788899999999998776 3 455566665 45555555432 3457888877654444 4443
Q ss_pred HHHhcCCC-CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHc
Q 006969 170 EAVKYAKR-PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKV 246 (623)
Q Consensus 170 eal~~a~~-~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~a 246 (623)
+....+|. +.+-+..|-. .+.+.++.++-.....+. .++..+-|+ |. .+...+++.+.+++ +.
T Consensus 96 ~~A~~~Ga~davlv~~P~y-------~~~s~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~~ 161 (311)
T 3h5d_A 96 KEVAEFGGFAAGLAIVPYY-------NKPSQEGMYQHFKAIADA---SDLPIIIYNIPGRVVVELTPETMLRLA----DH 161 (311)
T ss_dssp HHHHHSCCCSEEEEECCCS-------SCCCHHHHHHHHHHHHHS---CSSCEEEEECHHHHSSCCCHHHHHHHH----TS
T ss_pred HHHHhcCCCcEEEEcCCCC-------CCCCHHHHHHHHHHHHHh---CCCCEEEEecccccCCCCCHHHHHHHh----cC
Confidence 33345675 8877665532 244666665544443332 355545554 32 24456777766654 33
Q ss_pred CCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccH
Q 006969 247 GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASL 326 (623)
Q Consensus 247 Ga~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~l 326 (623)
...+.+.|+. ...++.++++ ..++ + +.+-+=+|. ..+.++..|++.+ +.| .+|.-.
T Consensus 162 -pnIvgiKdss---d~~~~~~~~~----~~~~--~--f~v~~G~d~-----~~l~~l~~Ga~G~---is~----~an~~P 217 (311)
T 3h5d_A 162 -PNIIGVKECT---SLANMAYLIE----HKPE--E--FLIYTGEDG-----DAFHAMNLGADGV---ISV----ASHTNG 217 (311)
T ss_dssp -TTEEEEEECS---CHHHHHHHHH----HCCS--S--CEEEECCGG-----GHHHHHHHTCCEE---EES----THHHHH
T ss_pred -CCEEEEEeCC---CHHHHHHHHH----HcCC--C--EEEEECcHH-----HHHHHHHcCCCEE---Eec----hhhhCH
Confidence 5899999987 4555555544 3442 1 233333331 2456677898754 333 457766
Q ss_pred HHHHHHHHh
Q 006969 327 EEVVMAFKC 335 (623)
Q Consensus 327 Eevv~~L~~ 335 (623)
+.++...+.
T Consensus 218 ~~~~~l~~a 226 (311)
T 3h5d_A 218 DEMHEMFTA 226 (311)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666555543
No 196
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=86.44 E-value=2.9 Score=41.19 Aligned_cols=160 Identities=19% Similarity=0.175 Sum_probs=90.3
Q ss_pred HHHHHhHcCCCEEEEe-----c-CCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchh-hHHHHHHHHhcCCCC
Q 006969 106 IARQLAKLGVDIIEAG-----F-PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNER-DIKTAWEAVKYAKRP 178 (623)
Q Consensus 106 Ia~~L~~~Gvd~IEvG-----f-P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~-dI~~a~eal~~a~~~ 178 (623)
-++.+ +.|+|++++. | |.-+- -...++.|++.. +. +-.+-|--.+++ -++.+.++ |++
T Consensus 18 ~i~~~-~~gad~lHvDvmDG~fvpn~t~-G~~~v~~lr~~~-~~--------~~dvhLmv~dp~~~i~~~~~a----GAd 82 (231)
T 3ctl_A 18 QIEFI-DSHADYFHIDIMDGHFVPNLTL-SPFFVSQVKKLA-TK--------PLDCHLMVTRPQDYIAQLARA----GAD 82 (231)
T ss_dssp HHHHH-HTTCSCEEEEEECSSSSSCCCB-CHHHHHHHHTTC-CS--------CEEEEEESSCGGGTHHHHHHH----TCS
T ss_pred HHHHH-HcCCCEEEEEEEeCccCccchh-cHHHHHHHHhcc-CC--------cEEEEEEecCHHHHHHHHHHc----CCC
Confidence 34555 8898877664 3 43221 235677776532 11 112222222333 35555555 899
Q ss_pred EEEEEecC-CHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCe-EEEcccCCCCCCHHHHHHHHHHHHHcCCcEEee---
Q 006969 179 RIHTFIAT-SGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD-VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI--- 253 (623)
Q Consensus 179 ~v~i~~~~-Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~-V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l--- 253 (623)
.|.+..-+ ++ | +.+.++.+|++|++. |.++|. ++.+.+.+++. ++|.|.+
T Consensus 83 ~itvh~Ea~~~-~---------------~~~~i~~i~~~G~k~gv~lnp~----tp~~~~~~~l~-----~~D~VlvmsV 137 (231)
T 3ctl_A 83 FITLHPETING-Q---------------AFRLIDEIRRHDMKVGLILNPE----TPVEAMKYYIH-----KADKITVMTV 137 (231)
T ss_dssp EEEECGGGCTT-T---------------HHHHHHHHHHTTCEEEEEECTT----CCGGGGTTTGG-----GCSEEEEESS
T ss_pred EEEECcccCCc-c---------------HHHHHHHHHHcCCeEEEEEECC----CcHHHHHHHHh-----cCCEEEEeee
Confidence 88764332 21 1 236788899999851 333552 44444444432 6787754
Q ss_pred -cCcccccCHHHHHHHHHHHHHhCC--CCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 254 -PDTVGITMPTEFGKLIADIKANTP--GIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 254 -~DTvG~~~P~~v~~li~~l~~~~~--~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
|-.-|-......-+.|+.+|+..+ +. +++|++ |-|.-..|.-.++++||+.+
T Consensus 138 ~pGfggQ~f~~~~l~kI~~lr~~~~~~~~-~~~I~V----dGGI~~~~~~~~~~aGAd~~ 192 (231)
T 3ctl_A 138 DPGFAGQPFIPEMLDKLAELKAWREREGL-EYEIEV----DGSCNQATYEKLMAAGADVF 192 (231)
T ss_dssp CTTCSSCCCCTTHHHHHHHHHHHHHHHTC-CCEEEE----ESCCSTTTHHHHHHHTCCEE
T ss_pred ccCcCCccccHHHHHHHHHHHHHHhccCC-CceEEE----ECCcCHHHHHHHHHcCCCEE
Confidence 223343334455566666666542 11 245665 78888889999999999987
No 197
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=86.44 E-value=6.4 Score=40.06 Aligned_cols=155 Identities=15% Similarity=0.131 Sum_probs=89.1
Q ss_pred HHHHHHHHHhccccccCCCccceEEeecccch-hhHHHHHHHHhcCCCCEEEEEecC---CHHHHHHH---hCCCHHHHH
Q 006969 131 EAVRTIAKEVGNAVDAESGYVPVICGLSRCNE-RDIKTAWEAVKYAKRPRIHTFIAT---SGIHMEHK---LRKTKQQVV 203 (623)
Q Consensus 131 e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~-~dI~~a~eal~~a~~~~v~i~~~~---Sd~h~~~~---l~~t~ee~l 203 (623)
+.+..+.+++...+.+ .|++++.+-..+ .++..-++.|+++|+..| +-.|+ .|-+.+.+ -+++ +
T Consensus 79 ~iv~e~~~evlp~v~~----iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~----~ 149 (286)
T 2p10_A 79 QIVVDMAREVLPVVRH----TPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMS----Y 149 (286)
T ss_dssp HHHHHHHHHHGGGCSS----SCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCC----H
T ss_pred HHHHHHHHhhhccCCC----CCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCC----H
Confidence 3444455444333222 477777554332 367777888999999988 65552 23233333 3555 4
Q ss_pred HHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEe--ec----Cccccc------C-HHHHHHHHH
Q 006969 204 EIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLN--IP----DTVGIT------M-PTEFGKLIA 270 (623)
Q Consensus 204 ~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~--l~----DTvG~~------~-P~~v~~li~ 270 (623)
+...++|+.|+++|+..+.|. .++ +-++++.++|+|.|. .+ -+.|.- . |+.+.++++
T Consensus 150 ~~eve~I~~A~~~gL~Ti~~v------~~~----eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~ 219 (286)
T 2p10_A 150 AQEVEMIAEAHKLDLLTTPYV------FSP----EDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIE 219 (286)
T ss_dssp HHHHHHHHHHHHTTCEECCEE------CSH----HHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEec------CCH----HHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHH
Confidence 456678999999998533221 222 345566788999865 44 233332 1 667888888
Q ss_pred HHHHhCCCCcceeEEEeecCCcchHH-HHHHHHHHh--CCCEE
Q 006969 271 DIKANTPGIENVVISTHCQNDLGLST-ANTIAGACA--GARQV 310 (623)
Q Consensus 271 ~l~~~~~~~~~v~i~~H~HND~GlAv-ANslaAv~a--GA~~V 310 (623)
.+++.-|+ +.+-.|.= |.+. --...+++. |++.+
T Consensus 220 a~~~vnpd---vivLc~gG---pIstpeDv~~~l~~t~G~~G~ 256 (286)
T 2p10_A 220 AARTIRDD---IIILSHGG---PIANPEDARFILDSCQGCHGF 256 (286)
T ss_dssp HHHHHCSC---CEEEEEST---TCCSHHHHHHHHHHCTTCCEE
T ss_pred HHHHhCCC---cEEEecCC---CCCCHHHHHHHHhcCCCccEE
Confidence 88887774 55555541 2211 245566677 87655
No 198
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=86.35 E-value=5.4 Score=41.95 Aligned_cols=130 Identities=11% Similarity=0.045 Sum_probs=81.1
Q ss_pred HHhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CC-C-eEEEcccCC-----CCCC
Q 006969 171 AVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GC-D-DVEFSPEDA-----GRSD 232 (623)
Q Consensus 171 al~~a~~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~-~-~V~f~~eda-----~r~d 232 (623)
..+.+|.+.|.|-.+. |+. ++...+|-+.+.-.+.+.+.++.+|+. |. . .|.+++.+. ...+
T Consensus 169 ~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~ 248 (365)
T 2gou_A 169 NAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADP 248 (365)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSH
T ss_pred HHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCC
Confidence 3456899999986643 221 122345666766666676777766653 31 1 245587421 2346
Q ss_pred HHHHHHHHHHHHHcCCcEEeecCcc--c-ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-CC
Q 006969 233 RKFLYEILGEVIKVGATTLNIPDTV--G-ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-AR 308 (623)
Q Consensus 233 ~e~l~~~~~~~~~aGa~~I~l~DTv--G-~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A~ 308 (623)
.+...++++.+.++|++.|.+.... | -..|. ++++.+++.++ +||..=. +. -..++..+++.| |+
T Consensus 249 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~---~~~~~i~~~~~----iPvi~~G--gi--~~~~a~~~l~~g~aD 317 (365)
T 2gou_A 249 ILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPV---SFKRALREAYQ----GVLIYAG--RY--NAEKAEQAINDGLAD 317 (365)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCH---HHHHHHHHHCC----SEEEEES--SC--CHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccH---HHHHHHHHHCC----CcEEEeC--CC--CHHHHHHHHHCCCcc
Confidence 6788899999999999999886531 1 11233 56788888874 3443222 12 257788889998 88
Q ss_pred EEE
Q 006969 309 QVE 311 (623)
Q Consensus 309 ~Vd 311 (623)
.|-
T Consensus 318 ~V~ 320 (365)
T 2gou_A 318 MIG 320 (365)
T ss_dssp EEE
T ss_pred eeh
Confidence 773
No 199
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=86.20 E-value=14 Score=37.47 Aligned_cols=218 Identities=14% Similarity=0.107 Sum_probs=113.8
Q ss_pred EEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHc--CCCEEEEecCCCChhHHHHHH-HHHHHhccccccCCCccceEEee
Q 006969 81 RVFDTTLRDGEQSPGATLTSKEKLDIARQLAKL--GVDIIEAGFPAASKEDFEAVR-TIAKEVGNAVDAESGYVPVICGL 157 (623)
Q Consensus 81 ~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~--Gvd~IEvGfP~~s~~d~e~v~-~i~~~~~~~~~~~~~l~~~i~~~ 157 (623)
..+|-|+= +-..|.++..++.+...+. |+.-+-+ +|...+ .++ .+.+. .... . ..+..+.+|
T Consensus 34 ~~IDhTlL------~p~~T~~dI~~lc~eA~~~~~~~aaVCV-~p~~V~----~a~~~L~~~--gs~~-~-v~v~tVigF 98 (281)
T 2a4a_A 34 CLTDHTFL------DENGTEDDIRELCNESVKTCPFAAAVCV-YPKFVK----FINEKIKQE--INPF-K-PKIACVINF 98 (281)
T ss_dssp TTEEEECC------CTTCCHHHHHHHHHHHHSSSSCCSEEEE-CGGGHH----HHHHHHHHH--SSSC-C-SEEEEEEST
T ss_pred HHcchhcC------CCCCCHHHHHHHHHHHHhccCCccEEEE-CHHHHH----HHHHHhhcc--CCCC-C-ceEEEEeCC
Confidence 34565553 2345899999999999999 9999987 554332 222 22211 1100 0 012233343
Q ss_pred c--ccc----hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHH---HHHHHHHHHHHHHHHcCCCeEEEcccCC
Q 006969 158 S--RCN----ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQ---QVVEIARSMVKFARSLGCDDVEFSPEDA 228 (623)
Q Consensus 158 ~--r~~----~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~e---e~l~~~~~~v~~ak~~G~~~V~f~~eda 228 (623)
= ... ...++.|++. |++.|.+++....+.. ...+ ++.+.+.+.++.+.+ . .+-+-.|..
T Consensus 99 P~G~~~~~~Kv~E~~~Av~~----GAdEIDmVinig~lks-----g~~~~~~~v~~eI~~v~~a~~~--~-~lKVIlEt~ 166 (281)
T 2a4a_A 99 PYGTDSMEKVLNDTEKALDD----GADEIDLVINYKKIIE-----NTDEGLKEATKLTQSVKKLLTN--K-ILKVIIEVG 166 (281)
T ss_dssp TTCCSCHHHHHHHHHHHHHH----TCSEEEEECCHHHHHH-----SHHHHHHHHHHHHHHHHTTCTT--S-EEEEECCHH
T ss_pred CCCCCCHHHHHHHHHHHHHc----CCCEEEEecchHhhhC-----CChhHHHHHHHHHHHHHHHhcC--C-ceEEEEecc
Confidence 1 111 1234444443 8999999886553211 1123 455555555444432 2 233334444
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeec--CcccccCHHHHHHHHHHHHHh-------CCCCcceeEEEeecCCcchHHHHH
Q 006969 229 GRSDRKFLYEILGEVIKVGATTLNIP--DTVGITMPTEFGKLIADIKAN-------TPGIENVVISTHCQNDLGLSTANT 299 (623)
Q Consensus 229 ~r~d~e~l~~~~~~~~~aGa~~I~l~--DTvG~~~P~~v~~li~~l~~~-------~~~~~~v~i~~H~HND~GlAvANs 299 (623)
.-+|.+.+...++.+.++|||-|--. =+.|.++|+.+.-+-+.+++. -+.. .+..+==.+ ++--+++-.
T Consensus 167 ~L~d~e~i~~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~v-gVKaaGGIr-t~e~al~~i 244 (281)
T 2a4a_A 167 ELKTEDLIIKTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAIKEYIKNNPEKNNKI-GLKVSGGIS-DLNTASHYI 244 (281)
T ss_dssp HHCSHHHHHHHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCC-EEEEESSCC-SHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhhcccccCCCCc-eEEEeCCCC-CHHHHHHHH
Confidence 45777778899999999999998865 233678999888777776532 1111 122221112 333333322
Q ss_pred HHHH-HhCCCEEEeccCCccCccCcccHH
Q 006969 300 IAGA-CAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 300 laAv-~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
.++. ..|.+|++-...=||...|-.+|+
T Consensus 245 ~aga~~lG~~w~~~~~~RiGtSs~~~~l~ 273 (281)
T 2a4a_A 245 LLARRFLSSLACHPDNFRIGSSSLVIKLR 273 (281)
T ss_dssp HHHHHHTC------CCEEEEESSHHHHHH
T ss_pred HHhhhhccccccccCceEEecCccHHHHH
Confidence 2222 246678777777777766655543
No 200
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=86.15 E-value=15 Score=37.18 Aligned_cols=201 Identities=14% Similarity=0.030 Sum_probs=119.2
Q ss_pred HHHHhHcCCCEEEEe-c--------CCCCh----hHHHHHHHHHHHhccccccCCCccceEEeeccc---chhhHHHHHH
Q 006969 107 ARQLAKLGVDIIEAG-F--------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC---NERDIKTAWE 170 (623)
Q Consensus 107 a~~L~~~Gvd~IEvG-f--------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~---~~~dI~~a~e 170 (623)
++.++++||+.|=+| + |...+ +-...++.|++.... |.++.+--. ....+-+...
T Consensus 29 A~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~---------pviaD~d~Gyg~~~~~~~~~v~ 99 (275)
T 2ze3_A 29 ARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAVAI---------PVNADIEAGYGHAPEDVRRTVE 99 (275)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCSS---------CEEEECTTCSSSSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhcCC---------CEEeecCCCCCCCHHHHHHHHH
Confidence 667788999999887 2 43222 124566666664321 333322111 2344444444
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCC--------CHHHHHHHHHH
Q 006969 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRS--------DRKFLYEILGE 242 (623)
Q Consensus 171 al~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~--------d~e~l~~~~~~ 242 (623)
.+..+|+..|+|-.... | ..+-=.+.+|..++++.+++.+++.|.+.+...=.|+.-. ..+.+++=+++
T Consensus 100 ~l~~aGaagv~iED~~~--~-~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~a 176 (275)
T 2ze3_A 100 HFAALGVAGVNLEDATG--L-TPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQA 176 (275)
T ss_dssp HHHHTTCSEEEEECBCS--S-SSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEECCCcC--C-CCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHH
Confidence 45558999999988765 2 1111147888888888888887777876332221133211 25777777888
Q ss_pred HHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccC
Q 006969 243 VIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAG 322 (623)
Q Consensus 243 ~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaG 322 (623)
..++|||.|.+.= .-.++++.++.+.+ + +|+-+-+.. ++ -..-.--+.|+++|-.... +=|+-
T Consensus 177 y~eAGAd~i~~e~---~~~~~~~~~i~~~~----~----~P~n~~~~~--~~--~~~~eL~~lGv~~v~~~~~--~~raa 239 (275)
T 2ze3_A 177 YADAGADGIFVPL---ALQSQDIRALADAL----R----VPLNVMAFP--GS--PVPRALLDAGAARVSFGQS--LMLAT 239 (275)
T ss_dssp HHHTTCSEEECTT---CCCHHHHHHHHHHC----S----SCEEEECCT--TS--CCHHHHHHTTCSEEECTTH--HHHHH
T ss_pred HHHCCCCEEEECC---CCCHHHHHHHHHhc----C----CCEEEecCC--CC--CCHHHHHHcCCcEEEEChH--HHHHH
Confidence 8999999999853 34456666655554 2 234443432 11 2234555779999853333 24677
Q ss_pred cccHHHHHHHHHhc
Q 006969 323 NASLEEVVMAFKCR 336 (623)
Q Consensus 323 Na~lEevv~~L~~~ 336 (623)
+..+++++..|...
T Consensus 240 ~~a~~~~~~~i~~~ 253 (275)
T 2ze3_A 240 LGLVQRMAAELHAA 253 (275)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 77788877777753
No 201
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=86.04 E-value=2.7 Score=43.08 Aligned_cols=141 Identities=14% Similarity=0.146 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHhccccccCCCccceEEeeccc-chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHH
Q 006969 129 DFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIAR 207 (623)
Q Consensus 129 d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~ 207 (623)
+++.++++++. + .|++.--+.. ..+++..|++.++..|.+.+++.--.+.. .+.. ..-.+.
T Consensus 121 n~~Ll~~~a~~-~---------kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~----~y~~-~~~dl~--- 182 (292)
T 1o60_A 121 QTDLVEAMAKT-G---------AVINVKKPQFLSPSQMGNIVEKIEECGNDKIILCDRGTNF----GYDN-LIVDML--- 182 (292)
T ss_dssp CHHHHHHHHHT-T---------CEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC----STTC-EECCTT---
T ss_pred CHHHHHHHHcC-C---------CcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC----CCCc-cccCHH---
Confidence 35677777752 1 1555544443 77899999999888898877776544321 1110 000111
Q ss_pred HHHHHHHHc--CCCeEEEcccCC----------CCCCHHHHHHHHHHHHHcCCcEEe----------ecCcccccCHHHH
Q 006969 208 SMVKFARSL--GCDDVEFSPEDA----------GRSDRKFLYEILGEVIKVGATTLN----------IPDTVGITMPTEF 265 (623)
Q Consensus 208 ~~v~~ak~~--G~~~V~f~~eda----------~r~d~e~l~~~~~~~~~aGa~~I~----------l~DTvG~~~P~~v 265 (623)
.+...|+. |+. |.|++--+ +.-.++++..++.+++.+||+.+. ++|-.=.+.|+++
T Consensus 183 -~i~~lk~~~~~~p-V~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H~~~d~al~Dg~~sl~p~~l 260 (292)
T 1o60_A 183 -GFSVMKKASKGSP-VIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEAHPNPNQAKCDGPSALPLSAL 260 (292)
T ss_dssp -HHHHHHHHTTSCC-EEEEHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEEESSGGGCSSCCTTCEEGGGH
T ss_pred -HHHHHHhhCCCCC-EEEECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEecCCcccCCchhhcCCCHHHH
Confidence 22234554 675 88844211 012235678888899999998332 3698889999999
Q ss_pred HHHHHHHHHh------CCCCcceeEEEeecC
Q 006969 266 GKLIADIKAN------TPGIENVVISTHCQN 290 (623)
Q Consensus 266 ~~li~~l~~~------~~~~~~v~i~~H~HN 290 (623)
.++++.+++. .+.. +..|+-|-|.
T Consensus 261 ~~lv~~ir~i~~a~g~~~~~-~~~~~~~~~~ 290 (292)
T 1o60_A 261 EGFVSQMKAIDDLVKSFPEL-DTSIGSHHHH 290 (292)
T ss_dssp HHHHHHHHHHHHHHHHSCCC-CC--------
T ss_pred HHHHHHHHHHHHHhCCchhc-cccccccccc
Confidence 9999988752 3333 3567777664
No 202
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=86.02 E-value=3.2 Score=42.45 Aligned_cols=103 Identities=14% Similarity=0.093 Sum_probs=81.3
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 006969 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (623)
Q Consensus 228 a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvANslaAv 303 (623)
.+..|.+-+.++++.+++.|++.|.++-|+|= ++++|-.++++.+.+...+. ++++-+|+ +|+.--++.-+..|-
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~-rvpviaGvg~~~t~~ai~la~~a~ 100 (301)
T 3m5v_A 22 NGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGT-KVKVLAGAGSNATHEAVGLAKFAK 100 (301)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTS-SCEEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCC-CCeEEEeCCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999994 58999999999998877541 25666665 789999999999999
Q ss_pred HhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 304 CAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 304 ~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
++||+.+=..---+-. .+-++++..++.
T Consensus 101 ~~Gadavlv~~P~y~~----~s~~~l~~~f~~ 128 (301)
T 3m5v_A 101 EHGADGILSVAPYYNK----PTQQGLYEHYKA 128 (301)
T ss_dssp HTTCSEEEEECCCSSC----CCHHHHHHHHHH
T ss_pred HcCCCEEEEcCCCCCC----CCHHHHHHHHHH
Confidence 9999998776543332 244666655543
No 203
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=85.99 E-value=1.1 Score=44.18 Aligned_cols=68 Identities=16% Similarity=0.086 Sum_probs=43.4
Q ss_pred HHHHHHHHHhHcCCCEEEEecCC----CChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCC
Q 006969 102 EKLDIARQLAKLGVDIIEAGFPA----ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (623)
Q Consensus 102 ~Kl~Ia~~L~~~Gvd~IEvGfP~----~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~ 177 (623)
+-+++++.+.+.|++.|-+--.. ....+++.++++++.+. .|.+.+-.-...++++.+++ .|+
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~---------ipvi~~Ggi~~~~~~~~~l~----~Ga 102 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT---------LPIIASGGAGKMEHFLEAFL----RGA 102 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCC---------SCEEEESCCCSHHHHHHHHH----TTC
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhCC---------CCEEEeCCCCCHHHHHHHHH----cCC
Confidence 45789999999999999874321 12235678888776531 24444433335677776665 388
Q ss_pred CEEEE
Q 006969 178 PRIHT 182 (623)
Q Consensus 178 ~~v~i 182 (623)
+.|++
T Consensus 103 d~V~i 107 (247)
T 3tdn_A 103 DKVSI 107 (247)
T ss_dssp SEECC
T ss_pred Ceeeh
Confidence 88765
No 204
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=85.96 E-value=5.1 Score=39.32 Aligned_cols=169 Identities=14% Similarity=0.183 Sum_probs=86.6
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccc-hhhHHHHHHHHhcCCC
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-ERDIKTAWEAVKYAKR 177 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~-~~dI~~a~eal~~a~~ 177 (623)
+.++-+++++.+.. .++.+++|.+---..-.+.++.|.+..+. +.+..+-+.. .+-++...+....+|+
T Consensus 23 ~~~~a~~~v~~~~~-~v~~~Kvg~~lf~~~G~~~v~~l~~~~g~---------~v~lD~Kl~DipnTv~~~~~~~~~~ga 92 (228)
T 3m47_A 23 NRDDALRVTGEVRE-YIDTVKIGYPLVLSEGMDIIAEFRKRFGC---------RIIADFKVADIPETNEKICRATFKAGA 92 (228)
T ss_dssp SHHHHHHHHHTTTT-TCSEEEEEHHHHHHHCTHHHHHHHHHHCC---------EEEEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHcCC-cccEEEEcHHHHHhcCHHHHHHHHhcCCC---------eEEEEEeecccHhHHHHHHHHHHhCCC
Confidence 56666666665421 28999999642111112466666652111 2333433331 1223445666666799
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE-cccCC--CCCC-HHHHHHHHHHHHHcCCcEEee
Q 006969 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDA--GRSD-RKFLYEILGEVIKVGATTLNI 253 (623)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f-~~eda--~r~d-~e~l~~~~~~~~~aGa~~I~l 253 (623)
+.|.+...... +++..+++.+++.|.. |.. ...+. .... .+++.++++.+.++|.+.+..
T Consensus 93 d~vtvh~~~G~---------------~~l~~~~~~~~~~g~~-v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~ 156 (228)
T 3m47_A 93 DAIIVHGFPGA---------------DSVRACLNVAEEMGRE-VFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVG 156 (228)
T ss_dssp SEEEEESTTCH---------------HHHHHHHHHHHHHTCE-EEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEEC
T ss_pred CEEEEeccCCH---------------HHHHHHHHHHHhcCCC-eEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 98876544332 3445667777777753 543 22211 1111 256677888888999887653
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCcceeE---EEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 254 PDTVGITMPTEFGKLIADIKANTPGIENVVI---STHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 254 ~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i---~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
|...|+++.++ |+..+. +..+ |+ |..-++. .++++||+.+
T Consensus 157 ----~at~~~e~~~i----r~~~~~--~~~iv~PGI------~~~g~~p-~~~~aGad~i 199 (228)
T 3m47_A 157 ----PSTRPERLSRL----REIIGQ--DSFLISPGV------GAQGGDP-GETLRFADAI 199 (228)
T ss_dssp ----CSSCHHHHHHH----HHHHCS--SSEEEECC----------------CGGGTCSEE
T ss_pred ----CCCChHHHHHH----HHhcCC--CCEEEecCc------CcCCCCH-hHHHcCCCEE
Confidence 44467766544 333332 0111 11 1111244 8899999975
No 205
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=85.93 E-value=2.9 Score=42.57 Aligned_cols=126 Identities=15% Similarity=0.057 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHhccccccCCCccceEEeeccc-chhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHH
Q 006969 129 DFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIAR 207 (623)
Q Consensus 129 d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~ 207 (623)
+++.++++++. + .|.+.--+.. ..+++..|++.++..|.+.+++.--.+.. .+.. +.++ .
T Consensus 118 n~~ll~~~a~~-~---------kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~----~~~~---~~~d--l 178 (280)
T 2qkf_A 118 QTDLVVAMAKT-G---------NVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSSF----GYDN---LVVD--M 178 (280)
T ss_dssp BHHHHHHHHHT-C---------CEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC----STTC---EECC--T
T ss_pred CHHHHHHHHcC-C---------CcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC----CCCc---cccC--H
Confidence 34566776542 1 1455444443 77899999999888898878777544421 1110 0000 0
Q ss_pred HHHHHHHHc--CCCeEEEcccCC----------CCCCHHHHHHHHHHHHHcCCcEEe----------ecCcccccCHHHH
Q 006969 208 SMVKFARSL--GCDDVEFSPEDA----------GRSDRKFLYEILGEVIKVGATTLN----------IPDTVGITMPTEF 265 (623)
Q Consensus 208 ~~v~~ak~~--G~~~V~f~~eda----------~r~d~e~l~~~~~~~~~aGa~~I~----------l~DTvG~~~P~~v 265 (623)
.++...|+. |+. |.|++--+ +.-.++++..++.+++..||+.+. ++|-.=.+.|.++
T Consensus 179 ~~i~~lk~~~~~~p-V~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~~~d~al~D~~~sl~p~~l 257 (280)
T 2qkf_A 179 LGFGVMKQTCGNLP-VIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLL 257 (280)
T ss_dssp THHHHHHHHTTTCC-EEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC----------------CCHH
T ss_pred HHHHHHHHhCCCCC-EEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeecCCcccCCCccccCCCHHHH
Confidence 123344554 675 88853211 134567888999999999996333 3588888999999
Q ss_pred HHHHHHHHH
Q 006969 266 GKLIADIKA 274 (623)
Q Consensus 266 ~~li~~l~~ 274 (623)
.++++.+++
T Consensus 258 ~~lv~~i~~ 266 (280)
T 2qkf_A 258 EDFLIRIKA 266 (280)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999886
No 206
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=85.87 E-value=1.7 Score=44.68 Aligned_cols=125 Identities=14% Similarity=0.157 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHhccccccCCCccceEEeecc-cchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHH--hCCCHHHHHHH
Q 006969 129 DFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHK--LRKTKQQVVEI 205 (623)
Q Consensus 129 d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~--l~~t~ee~l~~ 205 (623)
+++.++++++. + .|++.--+. +..+|+..+++.+...|.+.|.+.--.+.. -..+ +++
T Consensus 144 n~~LLr~va~~-g---------kPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~y-~~~~~~vdl-------- 204 (298)
T 3fs2_A 144 QTDLLIAAART-G---------RVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGVSF-GYNTLVSDM-------- 204 (298)
T ss_dssp CHHHHHHHHHT-T---------SEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCEEC-SSSCEECCT--------
T ss_pred CHHHHHHHHcc-C---------CcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCCCccCH--------
Confidence 45567776652 1 145544444 478899999999988888777664322211 0000 111
Q ss_pred HHHHHHHHHHcCCCeEEEcccCC----------CCCCHHHHHHHHHHHHHcCCcEEe----------ecCcccccCHHHH
Q 006969 206 ARSMVKFARSLGCDDVEFSPEDA----------GRSDRKFLYEILGEVIKVGATTLN----------IPDTVGITMPTEF 265 (623)
Q Consensus 206 ~~~~v~~ak~~G~~~V~f~~eda----------~r~d~e~l~~~~~~~~~aGa~~I~----------l~DTvG~~~P~~v 265 (623)
.++...|+.++. |.|++--+ +.-.++++..++.+++.+||+.+. ++|--=.++|+++
T Consensus 205 --~~i~~lk~~~~P-V~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~tpd~al~D~~~sl~p~el 281 (298)
T 3fs2_A 205 --RALPIMAGLGAP-VIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETHEDPDNAPSDGPNMVPIDKM 281 (298)
T ss_dssp --THHHHHHTTTSC-EEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEESSGGGCSSSGGGCEEGGGH
T ss_pred --HHHHHHHHcCCc-EEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEecCChhccCCchhhcCCHHHH
Confidence 123444556776 77744211 123567899999999999998433 4688889999999
Q ss_pred HHHHHHHHHh
Q 006969 266 GKLIADIKAN 275 (623)
Q Consensus 266 ~~li~~l~~~ 275 (623)
.++++.+++.
T Consensus 282 ~~lv~~ir~i 291 (298)
T 3fs2_A 282 PALLEKLMAF 291 (298)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998863
No 207
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=85.77 E-value=2.5 Score=44.67 Aligned_cols=174 Identities=13% Similarity=0.139 Sum_probs=88.4
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEe----cCCCC-----hhHHHHHHHHHHHhccccccCCCccceEEe------------
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAG----FPAAS-----KEDFEAVRTIAKEVGNAVDAESGYVPVICG------------ 156 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvG----fP~~s-----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~------------ 156 (623)
++.+++++.+. ++|++.||+. +|... +.+.+.++.+.+..+-.+ ..++.
T Consensus 33 ~~~~e~l~~aa---~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i-------~~~~~~~f~~p~~~~g~ 102 (393)
T 1xim_A 33 LDPVEAVHKLA---EIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGLIV-------PMVTTNLFTHPVFKDGG 102 (393)
T ss_dssp CCHHHHHHHHH---HHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBC-------CEEECCCSSSGGGTTCS
T ss_pred CCHHHHHHHHH---HhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCCEE-------EEEecCCcCCcccccCC
Confidence 57777766665 4599999998 67543 345566666555433221 11221
Q ss_pred ecccch-------hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCC----HHHHHHHHHHHHHHHHHc--CCCeEEE
Q 006969 157 LSRCNE-------RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKT----KQQVVEIARSMVKFARSL--GCDDVEF 223 (623)
Q Consensus 157 ~~r~~~-------~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t----~ee~l~~~~~~v~~ak~~--G~~~V~f 223 (623)
++...+ +.++++++..+..|.+.|.+....... .+-...+ .+...+.+.++++++++. |+. +.+
T Consensus 103 l~spd~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~--~~~~~~~~~~~~~~~~e~L~~l~~~A~~~g~gv~-l~l 179 (393)
T 1xim_A 103 FTSNDRSVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGA--EYDSAKDVSAALDRYREALNLLAQYSEDRGYGLR-FAI 179 (393)
T ss_dssp TTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEE--SSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCE-EEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCC--cCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCcE-EEE
Confidence 111111 234455555556688888775431100 0001122 345566677788888888 653 444
Q ss_pred cccCC------CCCCHHHHHHHHHHHHHcCCcE-Ee-ecCcccccCHH-HHHHHHHHHHHhCCCCcceeEEEeecCCc
Q 006969 224 SPEDA------GRSDRKFLYEILGEVIKVGATT-LN-IPDTVGITMPT-EFGKLIADIKANTPGIENVVISTHCQNDL 292 (623)
Q Consensus 224 ~~eda------~r~d~e~l~~~~~~~~~aGa~~-I~-l~DTvG~~~P~-~v~~li~~l~~~~~~~~~v~i~~H~HND~ 292 (623)
-+... .-.+.+.+.++++ +.+... +. ..||.=...+. .+.+.++.+... + -...+|+++..
T Consensus 180 E~~~~~~~~~~~~~t~~~~~~ll~---~v~~~~~vgl~lD~gH~~~~g~d~~~~l~~~~~~-~----~i~~vHl~D~~ 249 (393)
T 1xim_A 180 EPKPNEPRGDILLPTAGHAIAFVQ---ELERPELFGINPETGHEQMSNLNFTQGIAQALWH-K----KLFHIDLNGQH 249 (393)
T ss_dssp ECCSSSSSSEESSCSHHHHHHHHT---TSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHH-T----CBCCCEECBCC
T ss_pred ecCCCCCCCCCcCCCHHHHHHHHH---HhCCccceEEEEccCCccccCCCHHHHHHHhhhc-C----CEEEEEeCCCC
Confidence 22211 2245566666554 345433 33 34764332322 344555555411 1 12477888764
No 208
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=85.76 E-value=10 Score=35.73 Aligned_cols=158 Identities=13% Similarity=0.053 Sum_probs=86.6
Q ss_pred HHHHHHHHHhHcCCCEEEEecCCCChhH-HHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCCEE
Q 006969 102 EKLDIARQLAKLGVDIIEAGFPAASKED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRI 180 (623)
Q Consensus 102 ~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v 180 (623)
+-.+.++.+.+.|++.|++..|..++.+ .+.++.+.+..... + ++.+. .++++.+.++ |.+.|
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~-----~-v~v~v------~~~~~~a~~~----gad~v 90 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREY-----D-ALFFV------DDRVDVALAV----DADGV 90 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHT-----T-CEEEE------ESCHHHHHHH----TCSEE
T ss_pred hHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHc-----C-CeEEE------cChHHHHHHc----CCCEE
Confidence 4567788899999999999988766654 35555554432110 1 11221 2566766665 88998
Q ss_pred EEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEee---cCcc
Q 006969 181 HTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI---PDTV 257 (623)
Q Consensus 181 ~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l---~DTv 257 (623)
++....- +.+ .+ +..+ .++ .+.+++ .+++.+ ..+.+.|+|.|.+ -+|.
T Consensus 91 ~l~~~~~----------~~~----~~----~~~~-~~~-~~~v~~-----~t~~e~----~~~~~~g~d~i~~~~~~~~~ 141 (215)
T 1xi3_A 91 QLGPEDM----------PIE----VA----KEIA-PNL-IIGASV-----YSLEEA----LEAEKKGADYLGAGSVFPTK 141 (215)
T ss_dssp EECTTSC----------CHH----HH----HHHC-TTS-EEEEEE-----SSHHHH----HHHHHHTCSEEEEECSSCC-
T ss_pred EECCccC----------CHH----HH----HHhC-CCC-EEEEec-----CCHHHH----HHHHhcCCCEEEEcCCccCC
Confidence 7632111 111 11 1112 343 244443 234433 2356789999875 2332
Q ss_pred cc--cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 006969 258 GI--TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (623)
Q Consensus 258 G~--~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 313 (623)
+. ..|.. -+.++.+++.++ +++.. .-|....|...++++||+.|.+.
T Consensus 142 ~~~~~~~~~-~~~l~~l~~~~~----~pvia----~GGI~~~nv~~~~~~Ga~gv~vg 190 (215)
T 1xi3_A 142 TKEDARVIG-LEGLRKIVESVK----IPVVA----IGGINKDNAREVLKTGVDGIAVI 190 (215)
T ss_dssp ---CCCCCH-HHHHHHHHHHCS----SCEEE----ESSCCTTTHHHHHTTTCSEEEES
T ss_pred CCCCCCCcC-HHHHHHHHHhCC----CCEEE----ECCcCHHHHHHHHHcCCCEEEEh
Confidence 11 12222 245566666542 33433 35666678888888999998753
No 209
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=85.75 E-value=7.5 Score=39.66 Aligned_cols=108 Identities=19% Similarity=0.105 Sum_probs=75.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCccc----------ccCHHHHH
Q 006969 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG----------ITMPTEFG 266 (623)
Q Consensus 197 ~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG----------~~~P~~v~ 266 (623)
.|.+|++..+...++- .... |..+.+.++- +++.+.+.++.++++|+..|.|-|.++ ...++++.
T Consensus 65 vt~~em~~~~~~I~r~---~~~P-viaD~d~Gyg-~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~ 139 (287)
T 3b8i_A 65 ITLSEFVEQATRIGRV---ARLP-VIADADHGYG-NALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGV 139 (287)
T ss_dssp SCHHHHHHHHHHHHTT---CSSC-EEEECTTCSS-SHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHH
T ss_pred CCHHHHHHHHHHHHhc---CCCC-EEEECCCCCC-CHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHH
Confidence 5788877766654443 2344 7788866654 899999999999999999999999974 34556788
Q ss_pred HHHHHHHHhCCCCcceeEEEeecC---CcchHHHHHHHHHHhCCCEE
Q 006969 267 KLIADIKANTPGIENVVISTHCQN---DLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 267 ~li~~l~~~~~~~~~v~i~~H~HN---D~GlAvANslaAv~aGA~~V 310 (623)
+.|+.+++.-.+. +..|-.-+-. .+--++.-+.+..+|||+.|
T Consensus 140 ~~I~aa~~a~~~~-~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd~i 185 (287)
T 3b8i_A 140 GKIRAALEARVDP-ALTIIARTNAELIDVDAVIQRTLAYQEAGADGI 185 (287)
T ss_dssp HHHHHHHHHCCST-TSEEEEEEETTTSCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCC-CcEEEEechhhhcCHHHHHHHHHHHHHcCCCEE
Confidence 8898888763211 2333333322 22237777788888888876
No 210
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=85.67 E-value=14 Score=36.99 Aligned_cols=161 Identities=11% Similarity=0.112 Sum_probs=98.7
Q ss_pred CCCCHHHHHHHHHHHhHc--CCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecc--cch----hhHHH
Q 006969 96 ATLTSKEKLDIARQLAKL--GVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR--CNE----RDIKT 167 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~--Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r--~~~----~dI~~ 167 (623)
...+.++..++.+...+. |+.-+-+ +|...+ .+++..+.. ... . ..+..+.+|-. ... ..++.
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV-~p~~v~----~a~~~L~~~-g~~--~-v~v~tVigFP~G~~~~~~Kv~E~~~ 93 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICI-YPRFIP----IARKTLKEQ-GTP--E-IRIATVTNFPHGNDDIDIALAETRA 93 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEEC-CGGGHH----HHHHHHHHT-TCT--T-SEEEEEESTTTCCSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEE-CHHHHH----HHHHHhhhc-CCC--C-ceEEEEeCCCCCCCcHHHHHHHHHH
Confidence 345889999999998888 8988876 554322 222221100 110 0 01223334411 111 23344
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcC
Q 006969 168 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 168 a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aG 247 (623)
|++. |++.|.+++....+ .....+++.+.+.+.++.+.+.|.. +-+-.|...-++.+.+...++.+.++|
T Consensus 94 Av~~----GAdEIDmVinig~l-----~~g~~~~v~~ei~~v~~a~~~~g~~-lKvIlEt~~L~d~e~i~~a~~ia~eaG 163 (260)
T 1p1x_A 94 AIAY----GADEVDVVFPYRAL-----MAGNEQVGFDLVKACKEACAAANVL-LKVIIETGELKDEALIRKASEISIKAG 163 (260)
T ss_dssp HHHH----TCSEEEEECCHHHH-----HTTCCHHHHHHHHHHHHHHHHTTCE-EEEECCHHHHCSHHHHHHHHHHHHHTT
T ss_pred HHHc----CCCEEEEeccHHhh-----hCCCHHHHHHHHHHHHHHhcccCCe-EEEEEecccCCcHHHHHHHHHHHHHhC
Confidence 4443 89999998865421 2334577888888888888876642 333344444577777889999999999
Q ss_pred CcEEeecC--cccccCHHHHHHHHHHHHHh
Q 006969 248 ATTLNIPD--TVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 248 a~~I~l~D--TvG~~~P~~v~~li~~l~~~ 275 (623)
||-|--.- +.|.++|+.+.-+-+.+++.
T Consensus 164 ADfVKTSTGf~~~gAt~e~v~lm~~~I~~~ 193 (260)
T 1p1x_A 164 ADFIKTSTGKVAVNATPESARIMMEVIRDM 193 (260)
T ss_dssp CSEEECCCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 99887652 23566999888776666653
No 211
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=85.55 E-value=9.4 Score=38.44 Aligned_cols=98 Identities=12% Similarity=0.066 Sum_probs=63.8
Q ss_pred HHHHHHHHhcCCCCEEEEEecCCH-------HHH----HHHhCCCHHHHHHHHHHHHHHHHHcC--CCeEEEcccCCCCC
Q 006969 165 IKTAWEAVKYAKRPRIHTFIATSG-------IHM----EHKLRKTKQQVVEIARSMVKFARSLG--CDDVEFSPEDAGRS 231 (623)
Q Consensus 165 I~~a~eal~~a~~~~v~i~~~~Sd-------~h~----~~~l~~t~ee~l~~~~~~v~~ak~~G--~~~V~f~~eda~r~ 231 (623)
....++++..+|++.|++=+|-|| ++. --+.|.+.+..++ .++..|+.+ .. +.+- +..
T Consensus 34 ~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~----~v~~ir~~~~~~P-ivlm----~Y~ 104 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFD----IITKVRAQHPDMP-IGLL----LYA 104 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHH----HHHHHHHHCTTCC-EEEE----ECH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHH----HHHHHHhcCCCCC-EEEE----ecC
Confidence 334456677789999999988887 221 1135777666555 455555542 33 3221 122
Q ss_pred CHHH---HHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHh
Q 006969 232 DRKF---LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 232 d~e~---l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~ 275 (623)
+|-| +.++++.+.++|++.+.++| +.|++..+++..++++
T Consensus 105 npv~~~g~e~f~~~~~~aGvdgvii~D----lp~ee~~~~~~~~~~~ 147 (267)
T 3vnd_A 105 NLVFANGIDEFYTKAQAAGVDSVLIAD----VPVEESAPFSKAAKAH 147 (267)
T ss_dssp HHHHHHCHHHHHHHHHHHTCCEEEETT----SCGGGCHHHHHHHHHT
T ss_pred cHHHHhhHHHHHHHHHHcCCCEEEeCC----CCHhhHHHHHHHHHHc
Confidence 3322 25678889999999999998 5678888999998875
No 212
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=85.53 E-value=13 Score=38.02 Aligned_cols=205 Identities=8% Similarity=-0.029 Sum_probs=116.2
Q ss_pred HHHHhHcCCCEEEEe-c--------CCCCh----hHHHHHHHHHHHhccccccCCCccceEEe----ecccchhhHHHHH
Q 006969 107 ARQLAKLGVDIIEAG-F--------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKTAW 169 (623)
Q Consensus 107 a~~L~~~Gvd~IEvG-f--------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~a~ 169 (623)
++.++++||+.|=+| + |...+ +-.+.++.|++.... |.++. |+ ....+-+..
T Consensus 32 A~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~---------PviaD~d~Gyg--~~~~v~~~v 100 (295)
T 1s2w_A 32 ARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDV---------PILLDADTGYG--NFNNARRLV 100 (295)
T ss_dssp HHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCSS---------CEEEECCSSCS--SHHHHHHHH
T ss_pred HHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCC---------CEEecCCCCCC--CHHHHHHHH
Confidence 667788899999887 2 22111 123555666653221 33322 33 334555555
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhC-----CCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC--CCCHHHHHHHHHH
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLR-----KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG--RSDRKFLYEILGE 242 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~-----~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~--r~d~e~l~~~~~~ 242 (623)
..+..+|+..|+|-...++-.+-+--+ .+.++..++++.+++....-|+ .|.--. |+. ....+.+++=+++
T Consensus 101 ~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~-~i~aRt-da~~a~~g~~~ai~Ra~a 178 (295)
T 1s2w_A 101 RKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDF-CIVARV-EAFIAGWGLDEALKRAEA 178 (295)
T ss_dssp HHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTC-EEEEEE-CTTTTTCCHHHHHHHHHH
T ss_pred HHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCc-EEEEee-hHHhccccHHHHHHHHHH
Confidence 555678999999988876422211111 4567777766665554332232 122211 222 2346888888999
Q ss_pred HHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccC
Q 006969 243 VIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAG 322 (623)
Q Consensus 243 ~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaG 322 (623)
..++|||.|.+.= |.-+++++.++.+.+...+| +-+-. ..+|.- ..-.--+.|+++|-....+ -|+-
T Consensus 179 y~eAGAd~i~~e~--~~~~~~~~~~i~~~~~~~~P------~i~~~-~~~~~~--~~~eL~~lGv~~v~~~~~~--~raa 245 (295)
T 1s2w_A 179 YRNAGADAILMHS--KKADPSDIEAFMKAWNNQGP------VVIVP-TKYYKT--PTDHFRDMGVSMVIWANHN--LRAS 245 (295)
T ss_dssp HHHTTCSEEEECC--CSSSSHHHHHHHHHHTTCSC------EEECC-STTTTS--CHHHHHHHTCCEEEECSHH--HHHH
T ss_pred HHHcCCCEEEEcC--CCCCHHHHHHHHHHcCCCCC------EEEeC-CCCCCC--CHHHHHHcCCcEEEEChHH--HHHH
Confidence 9999999999851 34557888888887764344 32211 112221 1335556799998554443 3677
Q ss_pred cccHHHHHHHHHhcc
Q 006969 323 NASLEEVVMAFKCRG 337 (623)
Q Consensus 323 Na~lEevv~~L~~~~ 337 (623)
+..+++++..|...|
T Consensus 246 ~~a~~~~~~~i~~~g 260 (295)
T 1s2w_A 246 VSAIQQTTKQIYDDQ 260 (295)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcC
Confidence 778888888887654
No 213
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=85.50 E-value=3.9 Score=43.32 Aligned_cols=131 Identities=11% Similarity=0.025 Sum_probs=80.2
Q ss_pred HhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CC-C-eEEEcccCC-----CCCCH
Q 006969 172 VKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GC-D-DVEFSPEDA-----GRSDR 233 (623)
Q Consensus 172 l~~a~~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~-~-~V~f~~eda-----~r~d~ 233 (623)
.+.+|.+.|.|-.+. |+. ++...+|-+.+.-.+.+.+.|+.+|+. |. . .|.+++.+. ...+.
T Consensus 175 a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~ 254 (377)
T 2r14_A 175 AKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPE 254 (377)
T ss_dssp HHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHH
T ss_pred HHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCCH
Confidence 355799999987653 221 223346667777777777777777764 32 1 255677431 23456
Q ss_pred HHHHHHHHHHHHcCCcEEeecCcc-cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-CCEE
Q 006969 234 KFLYEILGEVIKVGATTLNIPDTV-GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQV 310 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l~DTv-G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A~~V 310 (623)
+...++++.+.++|++.|.+.--. ....|..-.++++.+++.++ +||..=. +. -...+..+++.| |+.|
T Consensus 255 ~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~----iPvi~~G--gi--~~~~a~~~l~~g~aD~V 325 (377)
T 2r14_A 255 AMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFK----GGLIYCG--NY--DAGRAQARLDDNTADAV 325 (377)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCC----SEEEEES--SC--CHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCC----CCEEEEC--CC--CHHHHHHHHHCCCceEE
Confidence 788899999999999999885411 00011001246777888774 3444322 22 267778888887 7776
No 214
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=85.39 E-value=1.9 Score=42.13 Aligned_cols=170 Identities=16% Similarity=0.176 Sum_probs=88.3
Q ss_pred HHHHHHHHHhHcCCCEEEE----ecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCC
Q 006969 102 EKLDIARQLAKLGVDIIEA----GFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (623)
Q Consensus 102 ~Kl~Ia~~L~~~Gvd~IEv----GfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~ 177 (623)
+-.++++.+.+.|++.|.+ |+....+.. +.++.+++... .|.+....-..+++++.+++ +|+
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~---------ipv~v~ggi~~~~~~~~~l~----~Ga 97 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLD---------VQVELSGGIRDDESLAAALA----TGC 97 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCS---------SEEEEESSCCSHHHHHHHHH----TTC
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcC---------CcEEEECCCCCHHHHHHHHH----cCC
Confidence 5678899999999999998 222223334 77888877531 24444333234566766655 488
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC-eEEEccc----------CCCCCCHHHHHHHHHHHHHc
Q 006969 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD-DVEFSPE----------DAGRSDRKFLYEILGEVIKV 246 (623)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~-~V~f~~e----------da~r~d~e~l~~~~~~~~~a 246 (623)
+.|++-... +. . .+.+.+.+ +..|.. .+..++- .....+.+...+.++.+.++
T Consensus 98 d~V~lg~~~----l~-----~----p~~~~~~~---~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~ 161 (244)
T 2y88_A 98 ARVNVGTAA----LE-----N----PQWCARVI---GEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSE 161 (244)
T ss_dssp SEEEECHHH----HH-----C----HHHHHHHH---HHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHT
T ss_pred CEEEECchH----hh-----C----hHHHHHHH---HHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhC
Confidence 988763211 00 1 12222333 333321 1122221 00000000345677778889
Q ss_pred CCcEEeecCcc--cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH-HHHHHHHHh---CCCEE
Q 006969 247 GATTLNIPDTV--GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST-ANTIAGACA---GARQV 310 (623)
Q Consensus 247 Ga~~I~l~DTv--G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv-ANslaAv~a---GA~~V 310 (623)
|++.|.+-+.. |...+. -.++++.+++.. ++||-. +-|... .+...++++ ||+.|
T Consensus 162 G~~~i~~~~~~~~~~~~g~-~~~~~~~l~~~~----~ipvia----~GGI~~~~d~~~~~~~~~~Gad~v 222 (244)
T 2y88_A 162 GCSRFVVTDITKDGTLGGP-NLDLLAGVADRT----DAPVIA----SGGVSSLDDLRAIATLTHRGVEGA 222 (244)
T ss_dssp TCCCEEEEETTTTTTTSCC-CHHHHHHHHTTC----SSCEEE----ESCCCSHHHHHHHHTTGGGTEEEE
T ss_pred CCCEEEEEecCCccccCCC-CHHHHHHHHHhC----CCCEEE----ECCCCCHHHHHHHHhhccCCCCEE
Confidence 99988765421 222111 234566666544 234443 245554 677777777 87665
No 215
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=85.35 E-value=1.8 Score=42.18 Aligned_cols=133 Identities=12% Similarity=0.117 Sum_probs=68.4
Q ss_pred HHHHHHHHHhHcCCCEEEEecCC--CChhHHHHHHHHHHHhccccccCCCccceE-Eeecccch-------hhHHHHHHH
Q 006969 102 EKLDIARQLAKLGVDIIEAGFPA--ASKEDFEAVRTIAKEVGNAVDAESGYVPVI-CGLSRCNE-------RDIKTAWEA 171 (623)
Q Consensus 102 ~Kl~Ia~~L~~~Gvd~IEvGfP~--~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i-~~~~r~~~-------~dI~~a~ea 171 (623)
.-.+.++.+.++|++ ||+.+.. ..+. ..++.+.+..+..+. ...|.. ..++...+ +.++.+++.
T Consensus 11 ~l~~~l~~~~~~G~~-vEl~~~~~~~~~~--~~~~~~~~~~~~~~~---~h~~~~~~~l~~~~~~~r~~~~~~~~~~i~~ 84 (254)
T 3ayv_A 11 RAEEALPRLQALGLG-AEVYLDPALLEED--ALFQSLRRRFSGKLS---VHLPFWNLDLLSPDPEVRGLTLRRLLFGLDR 84 (254)
T ss_dssp GHHHHHHHHHHHTCE-EEEECCGGGTTCH--HHHHHHHHHCCSCEE---EECCCTTCCTTCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC-EEEeccccccCcH--HHHHHHHHHhCCCeE---EecCccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 345566777788999 9995321 1111 156666665421110 000000 01111111 234556666
Q ss_pred HhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHH
Q 006969 172 VKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEV 243 (623)
Q Consensus 172 l~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~ 243 (623)
....|.+.|.+.................+...+.+.++.++|++.|+. +.+-+.. ..+++.+.++++.+
T Consensus 85 A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~lEn~~--~~~~~~~~~l~~~v 153 (254)
T 3ayv_A 85 AAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVR-LLLENSH--EPHPEALRPVLEAH 153 (254)
T ss_dssp HHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCE-EEEECSS--CSSGGGTHHHHHHH
T ss_pred HHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCE-EEEcCCC--CCCHHHHHHHHHhc
Confidence 667799988775433211000000112355667777888889999974 5553322 23667777777765
No 216
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=85.30 E-value=7 Score=38.15 Aligned_cols=194 Identities=14% Similarity=0.142 Sum_probs=100.7
Q ss_pred HHHHHHHHHHhHcCCCEEEEecCCCC----hhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 101 KEKLDIARQLAKLGVDIIEAGFPAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 101 e~Kl~Ia~~L~~~Gvd~IEvGfP~~s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
++-+++++.|.+.|++.|.+--+... ...++.++.+++... .|.+.+-.-...++++.++++ |
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~---------iPvi~~Ggi~~~~~~~~~~~~----G 97 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAERVF---------IPLTVGGGVRSLEDARKLLLS----G 97 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTCC---------SCEEEESSCCSHHHHHHHHHH----T
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhCC---------CCEEEECCcCCHHHHHHHHHc----C
Confidence 46688999999999998887433211 234566777665321 244443222246777777765 8
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCe--EEEcc---------c-CCCCC-CHHHHHHHHHHH
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD--VEFSP---------E-DAGRS-DRKFLYEILGEV 243 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~--V~f~~---------e-da~r~-d~e~l~~~~~~~ 243 (623)
++.|++-... +. .+ +.+.+..+. .|.+. +..++ + +.... ......+.++.+
T Consensus 98 ad~V~lg~~~----l~-----~p----~~~~~~~~~---~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~ 161 (252)
T 1ka9_F 98 ADKVSVNSAA----VR-----RP----ELIRELADH---FGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKG 161 (252)
T ss_dssp CSEEEECHHH----HH-----CT----HHHHHHHHH---HCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred CCEEEEChHH----Hh-----Cc----HHHHHHHHH---cCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHH
Confidence 8888763211 10 01 112223222 22111 22221 0 11110 001234556677
Q ss_pred HHcCCcEEeecCc--ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEEEeccCCccCc
Q 006969 244 IKVGATTLNIPDT--VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEVTINGIGER 320 (623)
Q Consensus 244 ~~aGa~~I~l~DT--vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~Vd~Tv~GlGER 320 (623)
.+.|++.|.+.++ .|...... .++++.+++.++ +|+-.- .|.. ..+.....++||+.|=+ |=+=-
T Consensus 162 ~~~G~~~i~~~~~~~~g~~~g~~-~~~i~~l~~~~~----ipvia~----GGI~~~~d~~~~~~~Gadgv~v---gsal~ 229 (252)
T 1ka9_F 162 VELGAGEILLTSMDRDGTKEGYD-LRLTRMVAEAVG----VPVIAS----GGAGRMEHFLEAFQAGAEAALA---ASVFH 229 (252)
T ss_dssp HHHTCCEEEEEETTTTTTCSCCC-HHHHHHHHHHCS----SCEEEE----SCCCSHHHHHHHHHTTCSEEEE---SHHHH
T ss_pred HHcCCCEEEEecccCCCCcCCCC-HHHHHHHHHHcC----CCEEEe----CCCCCHHHHHHHHHCCCHHHHH---HHHHH
Confidence 7889998887643 34332211 456677777652 333322 3444 36777777889887632 21111
Q ss_pred cCcccHHHHHHHHHh
Q 006969 321 AGNASLEEVVMAFKC 335 (623)
Q Consensus 321 aGNa~lEevv~~L~~ 335 (623)
.+.-+++++...|..
T Consensus 230 ~~~~~~~~~~~~l~~ 244 (252)
T 1ka9_F 230 FGEIPIPKLKRYLAE 244 (252)
T ss_dssp TTSSCHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHH
Confidence 233477777777765
No 217
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=85.21 E-value=8.4 Score=39.18 Aligned_cols=139 Identities=18% Similarity=0.215 Sum_probs=82.1
Q ss_pred HHHHHHHhHcCCCEEEEec---------CCC----ChhHHHHHHHHHHHhccccccCCCccceEEeec--cc--chhh-H
Q 006969 104 LDIARQLAKLGVDIIEAGF---------PAA----SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS--RC--NERD-I 165 (623)
Q Consensus 104 l~Ia~~L~~~Gvd~IEvGf---------P~~----s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~--r~--~~~d-I 165 (623)
---|+.++++|||.|=+|. |.. ..+....++.+++-.... +.++.+. .. +.++ +
T Consensus 44 a~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~--------~vvaD~pfgsy~~s~~~a~ 115 (281)
T 1oy0_A 44 YSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHA--------LVVADLPFGSYEAGPTAAL 115 (281)
T ss_dssp HHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTS--------EEEEECCTTSSTTCHHHHH
T ss_pred HHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCC--------eEEEECCCCcccCCHHHHH
Confidence 3458889999999998873 322 223346667777643221 2223222 21 2222 3
Q ss_pred HHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE----EcccC---------CCCCC
Q 006969 166 KTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE----FSPED---------AGRSD 232 (623)
Q Consensus 166 ~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~----f~~ed---------a~r~d 232 (623)
+.+.+.++++|+..|++-... .+.+.|+.+.+.|+. |+ +.|.+ -+|++
T Consensus 116 ~na~rl~~eaGa~aVklEdg~------------------e~~~~I~al~~agIp-V~gHiGLtPqsv~~~ggf~v~grt~ 176 (281)
T 1oy0_A 116 AAATRFLKDGGAHAVKLEGGE------------------RVAEQIACLTAAGIP-VMAHIGFTPQSVNTLGGFRVQGRGD 176 (281)
T ss_dssp HHHHHHHHTTCCSEEEEEBSG------------------GGHHHHHHHHHHTCC-EEEEEECCC--------------CH
T ss_pred HHHHHHHHHhCCeEEEECCcH------------------HHHHHHHHHHHCCCC-EEeeecCCcceecccCCeEEEeCcH
Confidence 446667777899999987651 234566777778876 43 23321 12343
Q ss_pred -HHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCC
Q 006969 233 -RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP 277 (623)
Q Consensus 233 -~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~ 277 (623)
.+.+++=++++.++||+.|.+.= .|. ++.+.+.+.++
T Consensus 177 ~a~~~i~rA~a~~eAGA~~ivlE~-----vp~---~~a~~it~~l~ 214 (281)
T 1oy0_A 177 AAEQTIADAIAVAEAGAFAVVMEM-----VPA---ELATQITGKLT 214 (281)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEES-----CCH---HHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHcCCcEEEEec-----CCH---HHHHHHHHhCC
Confidence 36677777888999999999843 354 34556666664
No 218
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=85.12 E-value=12 Score=38.93 Aligned_cols=133 Identities=12% Similarity=0.026 Sum_probs=84.2
Q ss_pred HHhcCCCCEEEEEecCC--------HH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC---eEEEcccCC--CCCCHH
Q 006969 171 AVKYAKRPRIHTFIATS--------GI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD---DVEFSPEDA--GRSDRK 234 (623)
Q Consensus 171 al~~a~~~~v~i~~~~S--------d~--h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~---~V~f~~eda--~r~d~e 234 (623)
..+.+|.+.|.|-.+.- +. ++...+|-+.+.-.+.+.+.|+.+|+. |-+ .|.+++.+. ...+++
T Consensus 160 ~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~ 239 (349)
T 3hgj_A 160 RALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLE 239 (349)
T ss_dssp HHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHH
T ss_pred HHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHH
Confidence 34568999988876641 21 223345667887778888888888775 322 255677542 235677
Q ss_pred HHHHHHHHHHHcCCcEEeecC--cccc----cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-C
Q 006969 235 FLYEILGEVIKVGATTLNIPD--TVGI----TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-A 307 (623)
Q Consensus 235 ~l~~~~~~~~~aGa~~I~l~D--TvG~----~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A 307 (623)
...++++.+.++|++.|.+.. +... ..|....++++.+++.++ +||..=.-- .-...+..+++.| |
T Consensus 240 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~----iPVi~~Ggi---~t~e~a~~~l~~G~a 312 (349)
T 3hgj_A 240 DTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVG----LRTGAVGLI---TTPEQAETLLQAGSA 312 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHC----CEEEECSSC---CCHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcC----ceEEEECCC---CCHHHHHHHHHCCCc
Confidence 888999999999999999874 1111 113223467778887763 455432210 1246677888888 7
Q ss_pred CEE
Q 006969 308 RQV 310 (623)
Q Consensus 308 ~~V 310 (623)
+.|
T Consensus 313 D~V 315 (349)
T 3hgj_A 313 DLV 315 (349)
T ss_dssp SEE
T ss_pred eEE
Confidence 866
No 219
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=85.06 E-value=7 Score=39.12 Aligned_cols=147 Identities=17% Similarity=0.144 Sum_probs=85.2
Q ss_pred HHHHHhHcCCCEEEEec---------CCCCh----hHHHHHHHHHHHhccccccCCCccceEEe----ecccchhhHHHH
Q 006969 106 IARQLAKLGVDIIEAGF---------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKTA 168 (623)
Q Consensus 106 Ia~~L~~~Gvd~IEvGf---------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~a 168 (623)
-++.++++|||.|=+|. |...+ +-...++.+++.... |.++. |+... .+.+
T Consensus 32 sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~---------pviaD~~~Gyg~~~---~~~~ 99 (255)
T 2qiw_A 32 SAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAVSI---------PVSVDVESGYGLSP---ADLI 99 (255)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHCSS---------CEEEECTTCTTCCH---HHHH
T ss_pred HHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcCCC---------CEEeccCCCcCcHH---HHHH
Confidence 36778889999998872 32222 123556666654321 33322 22111 3333
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCC---CCC----CHHHHHHHHH
Q 006969 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA---GRS----DRKFLYEILG 241 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda---~r~----d~e~l~~~~~ 241 (623)
.+.+ .+|+..|+|-... |...+-=.+.+|..+.++.+++.+++.|.+.+...=.|. ++. ..+.+++=++
T Consensus 100 ~~l~-~aGa~gv~iEd~~---~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~ 175 (255)
T 2qiw_A 100 AQIL-EAGAVGINVEDVV---HSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIK 175 (255)
T ss_dssp HHHH-HTTCCEEEECSEE---GGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHH
T ss_pred HHHH-HcCCcEEEECCCC---CCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHH
Confidence 3333 4799999987664 332221136788888888888888877876322211121 222 2577888888
Q ss_pred HHHHcCCcEEeecCcccccCHHHHHHHHHH
Q 006969 242 EVIKVGATTLNIPDTVGITMPTEFGKLIAD 271 (623)
Q Consensus 242 ~~~~aGa~~I~l~DTvG~~~P~~v~~li~~ 271 (623)
+..++||+.|.+. |.-.++++.++.+.
T Consensus 176 a~~eAGAd~i~~e---~~~~~~~~~~i~~~ 202 (255)
T 2qiw_A 176 LMEQAGARSVYPV---GLSTAEQVERLVDA 202 (255)
T ss_dssp HHHHHTCSEEEEC---CCCSHHHHHHHHTT
T ss_pred HHHHcCCcEEEEc---CCCCHHHHHHHHHh
Confidence 8999999999994 33334555444443
No 220
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=84.99 E-value=3.1 Score=43.46 Aligned_cols=106 Identities=14% Similarity=0.042 Sum_probs=81.5
Q ss_pred EcccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHH
Q 006969 223 FSPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTA 297 (623)
Q Consensus 223 f~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvA 297 (623)
+.|-+ .+..|.+-+.++++.+++.|++.|.++-|+|= ++++|-.++++.+.+...+ +++|-+++ +|+.--++.
T Consensus 40 vTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg~~st~eai~ 117 (343)
T 2v9d_A 40 STIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR--RVPVLIGTGGTNARETIE 117 (343)
T ss_dssp CCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCSSCHHHHHH
T ss_pred ECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHHHHH
Confidence 45543 35789999999999999999999999999985 7899999999999887655 35565554 688888999
Q ss_pred HHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 298 NTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 298 NslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
.+..|-++||+.|=..---+-. .+-++++..++
T Consensus 118 la~~A~~~Gadavlv~~P~Y~~----~s~~~l~~~f~ 150 (343)
T 2v9d_A 118 LSQHAQQAGADGIVVINPYYWK----VSEANLIRYFE 150 (343)
T ss_dssp HHHHHHHHTCSEEEEECCSSSC----CCHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCCC----CCHHHHHHHHH
Confidence 9999999999998765443321 23455554443
No 221
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=84.97 E-value=3.4 Score=40.62 Aligned_cols=67 Identities=18% Similarity=0.381 Sum_probs=52.0
Q ss_pred HHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCc
Q 006969 240 LGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI 317 (623)
Q Consensus 240 ~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~Gl 317 (623)
++.+.++|||.|.| |+.....|..+.++++.+++. + +.+..=+|+ ...+..|.++||+.|=+++.|+
T Consensus 94 i~~~~~aGad~I~l-~~~~~~~p~~l~~~i~~~~~~--g---~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~ 160 (229)
T 3q58_A 94 VDALAQAGADIIAF-DASFRSRPVDIDSLLTRIRLH--G---LLAMADCST-----VNEGISCHQKGIEFIGTTLSGY 160 (229)
T ss_dssp HHHHHHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT--T---CEEEEECSS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHcCCCEEEE-CccccCChHHHHHHHHHHHHC--C---CEEEEecCC-----HHHHHHHHhCCCCEEEecCccC
Confidence 45677899998855 777777899999999999874 2 456666675 5677899999999996666665
No 222
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=84.95 E-value=12 Score=38.73 Aligned_cols=136 Identities=13% Similarity=0.017 Sum_probs=84.7
Q ss_pred HHHHHhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-eEEEcccCC--CCCCH
Q 006969 168 AWEAVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDA--GRSDR 233 (623)
Q Consensus 168 a~eal~~a~~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~-~V~f~~eda--~r~d~ 233 (623)
+.+..+.+|.+.|.|-.+. |+. ++...+|-+.+.-.+.+.+.++.+|+. .+. .|.+++.|. ...+.
T Consensus 149 aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~ 228 (338)
T 1z41_A 149 AAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDI 228 (338)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCH
T ss_pred HHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCH
Confidence 3344566899998887653 221 222345667776677777777777765 222 245677432 23567
Q ss_pred HHHHHHHHHHHHcCCcEEeecCccc--c---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcch-HHHHHHHHHHhC-
Q 006969 234 KFLYEILGEVIKVGATTLNIPDTVG--I---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAGACAG- 306 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l~DTvG--~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl-AvANslaAv~aG- 306 (623)
+...++++.+.++|++.|.+.+..- . ..|....++++.+++.+. +||..= -|. -...+..+++.|
T Consensus 229 ~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~----iPVi~~----Ggi~s~~~a~~~l~~G~ 300 (338)
T 1z41_A 229 ADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQAD----MATGAV----GMITDGSMAEEILQNGR 300 (338)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHC----CEEEEC----SSCCSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCC----CCEEEE----CCCCCHHHHHHHHHcCC
Confidence 8889999999999999999865421 1 122223466777887763 455432 222 256777888888
Q ss_pred CCEEE
Q 006969 307 ARQVE 311 (623)
Q Consensus 307 A~~Vd 311 (623)
|+.|-
T Consensus 301 aD~V~ 305 (338)
T 1z41_A 301 ADLIF 305 (338)
T ss_dssp CSEEE
T ss_pred ceEEe
Confidence 88763
No 223
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=84.95 E-value=13 Score=37.47 Aligned_cols=157 Identities=12% Similarity=0.136 Sum_probs=87.0
Q ss_pred HHHHHHHHhHcCCCEEEE----ecCCCChhHHHHHHHHHHHhccccccCCCccceEEe-ecccchhhHHHHHHHHhcCCC
Q 006969 103 KLDIARQLAKLGVDIIEA----GFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-LSRCNERDIKTAWEAVKYAKR 177 (623)
Q Consensus 103 Kl~Ia~~L~~~Gvd~IEv----GfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~-~~r~~~~dI~~a~eal~~a~~ 177 (623)
-.++|+...+.|.+.|-+ +|..-+.+ .++.+++.+. .|.++- |.+ .+..|..+. .+|+
T Consensus 81 p~~~A~~y~~~GA~~IsVltd~~~f~Gs~~---~L~~ir~~v~---------lPVl~Kdfi~-d~~qi~ea~----~~GA 143 (272)
T 3tsm_A 81 PPALAKAYEEGGAACLSVLTDTPSFQGAPE---FLTAARQACS---------LPALRKDFLF-DPYQVYEAR----SWGA 143 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSTTTCCCHH---HHHHHHHTSS---------SCEEEESCCC-STHHHHHHH----HTTC
T ss_pred HHHHHHHHHHCCCCEEEEeccccccCCCHH---HHHHHHHhcC---------CCEEECCccC-CHHHHHHHH----HcCC
Confidence 367899999999999988 33333444 4555555331 133321 222 233455444 4599
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcc
Q 006969 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV 257 (623)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTv 257 (623)
+.|.+..+.- +. +.+.+.+++++++|++ +-+.. .+.+. ++.+.++|++.|.+--..
T Consensus 144 D~VlLi~a~L----------~~----~~l~~l~~~a~~lGl~-~lvev-----h~~eE----l~~A~~~ga~iIGinnr~ 199 (272)
T 3tsm_A 144 DCILIIMASV----------DD----DLAKELEDTAFALGMD-ALIEV-----HDEAE----MERALKLSSRLLGVNNRN 199 (272)
T ss_dssp SEEEEETTTS----------CH----HHHHHHHHHHHHTTCE-EEEEE-----CSHHH----HHHHTTSCCSEEEEECBC
T ss_pred CEEEEccccc----------CH----HHHHHHHHHHHHcCCe-EEEEe-----CCHHH----HHHHHhcCCCEEEECCCC
Confidence 9998865532 21 4466888999999985 44433 23343 355668899988765222
Q ss_pred ccc---CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcch-HHHHHHHHHHhCCCEE
Q 006969 258 GIT---MPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAGACAGARQV 310 (623)
Q Consensus 258 G~~---~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl-AvANslaAv~aGA~~V 310 (623)
... .+..+.+++ +.+|. ++++-.= .|. .-.+...+.++||+.|
T Consensus 200 l~t~~~dl~~~~~L~----~~ip~--~~~vIae----sGI~t~edv~~l~~~Ga~gv 246 (272)
T 3tsm_A 200 LRSFEVNLAVSERLA----KMAPS--DRLLVGE----SGIFTHEDCLRLEKSGIGTF 246 (272)
T ss_dssp TTTCCBCTHHHHHHH----HHSCT--TSEEEEE----SSCCSHHHHHHHHTTTCCEE
T ss_pred CccCCCChHHHHHHH----HhCCC--CCcEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 111 223333443 44543 2222211 222 2455667778898876
No 224
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=84.91 E-value=5.1 Score=39.22 Aligned_cols=199 Identities=12% Similarity=0.073 Sum_probs=106.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
.|-.+-...+-+.+.+.|++.+-.-.......+.+.++.+... .++ + |..+. ....++...++.+...+
T Consensus 21 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~---~vd---g----iI~~~-~~~~~~~~~~~~~~~~~ 89 (293)
T 3l6u_A 21 EFAQRLINAFKAEAKANKYEALVATSQNSRISEREQILEFVHL---KVD---A----IFITT-LDDVYIGSAIEEAKKAG 89 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHT---TCS---E----EEEEC-SCTTTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHc---CCC---E----EEEec-CChHHHHHHHHHHHHcC
Confidence 3455666777788889999776553322222334566665542 111 1 22121 23344444455566678
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-c-CCC-----eEEE-cccCCCCCCHHHHHHHHHHHHHc-C
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS-L-GCD-----DVEF-SPEDAGRSDRKFLYEILGEVIKV-G 247 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~-~-G~~-----~V~f-~~eda~r~d~e~l~~~~~~~~~a-G 247 (623)
++.|.+-....+.........+.. +....+++++.+ + |.+ .|.| +.........+.+.-+.+++.+. |
T Consensus 90 iPvV~~~~~~~~~~~~~~V~~D~~---~~g~~~~~~l~~~~~g~~~~~~~~i~~i~g~~~~~~~~~R~~gf~~~l~~~~g 166 (293)
T 3l6u_A 90 IPVFAIDRMIRSDAVVSSITSNNQ---MIGEQLASYIKNELIKQTGRSTGRIVEITGTANVYTTNERHRGFLKGIENEPT 166 (293)
T ss_dssp CCEEEESSCCCCTTCSEEEEECHH---HHHHHHHHHHHHHHHHHHSCSCEEEEEEECSTTCHHHHHHHHHHHHHHTTCTT
T ss_pred CCEEEecCCCCCCcceeEEecCHH---HHHHHHHHHHHHHhccCCCCCCceEEEEECCCCCchHHHHHHHHHHHHHhCCC
Confidence 998766433221000011223333 344455566655 3 443 4544 32222233345565666667677 7
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCcc
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlG 318 (623)
...... -.+...+....+.+..+.+..|+.+ .+=|.|| .+|++-..+.-++|.+ |.+|.|++
T Consensus 167 ~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d-~~a~g~~~al~~~g~~--di~vig~d 228 (293)
T 3l6u_A 167 LSIVDS--VSGNYDPVTSERVMRQVIDSGIPFD----AVYCHND-DIAMGVLEALKKAKIS--GKIVVGID 228 (293)
T ss_dssp EEEEEE--EECTTCHHHHHHHHHHHHHTTCCCS----EEEESSH-HHHHHHHHHHHHTTCC--CCEEEEEE
T ss_pred cEEeee--ccCCCCHHHHHHHHHHHHHhCCCCC----EEEECCc-hHHHHHHHHHHhCCCC--CeEEEEec
Confidence 654332 3455678888888888777666543 4446665 3444444455678987 99999986
No 225
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=84.80 E-value=9.3 Score=39.32 Aligned_cols=188 Identities=16% Similarity=0.090 Sum_probs=107.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChh-HHHHHHHHHHHhccccccCCCccceEEeeccc-chhhHHHHHHHHhc
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWEAVKY 174 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~eal~~ 174 (623)
..+.+.-..+++.-.+++-+.|=-.+|....- ..+.+..+.+..... . .-+|...=+=-+ ..+.+..|+++
T Consensus 24 v~n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~---~-~~VPValHLDHg~~~e~~~~ai~~--- 96 (307)
T 3n9r_A 24 FVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCER---Y-PHIPVALHLDHGTTFESCEKAVKA--- 96 (307)
T ss_dssp CSSHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHH---S-TTSCEEEEEEEECSHHHHHHHHHH---
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHh---c-CCCcEEEECCCCCCHHHHHHHHHh---
Confidence 35789999999999999999774444432110 112333322211000 0 013443333222 34566666665
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------cccC--------CCCCCHHHHHHHH
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPED--------AGRSDRKFLYEIL 240 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~~ed--------a~r~d~e~l~~~~ 240 (623)
|...|-+ . .| ..+.|||++..++.+++|+..|+. |+- +-|| ...|||+.+.+++
T Consensus 97 -GFtSVMi-D-gS--------~~p~eeNi~~Tk~vv~~ah~~gvs-VEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv 164 (307)
T 3n9r_A 97 -GFTSVMI-D-AS--------HHAFEENLELTSKVVKMAHNAGVS-VEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFV 164 (307)
T ss_dssp -TCSEEEE-C-CT--------TSCHHHHHHHHHHHHHHHHHTTCE-EEEEESCCCCC----------CCSCCHHHHHHHH
T ss_pred -CCCcEEE-E-CC--------CCCHHHHHHHHHHHHHHHHHcCCe-EEEEeeeeccccCCcccccccccCCCHHHHHHHH
Confidence 8887644 2 22 237899999999999999999974 542 2222 3468999988887
Q ss_pred HHHHHcCCcEEeec--Cccccc----CHHHHHHHHHHHHHhCCCCcceeEEEeecC-------------------CcchH
Q 006969 241 GEVIKVGATTLNIP--DTVGIT----MPTEFGKLIADIKANTPGIENVVISTHCQN-------------------DLGLS 295 (623)
Q Consensus 241 ~~~~~aGa~~I~l~--DTvG~~----~P~~v~~li~~l~~~~~~~~~v~i~~H~HN-------------------D~GlA 295 (623)
++ -|+|.+-++ -.=|.- .|.-=.++++.+++. + ++||-+|.=- ..|..
T Consensus 165 ~~---TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~-~---~~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~p 237 (307)
T 3n9r_A 165 KE---SQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRL-T---NIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVP 237 (307)
T ss_dssp HH---HCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHH-H---CSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCC
T ss_pred HH---HCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhc-C---CCCeEEeCCCCcchHHHHHHHHhcCccCCCCCCC
Confidence 64 588876554 222322 132222344444443 3 2679988632 33666
Q ss_pred HHHHHHHHHhCCCEE
Q 006969 296 TANTIAGACAGARQV 310 (623)
Q Consensus 296 vANslaAv~aGA~~V 310 (623)
...-..|+..|+.-|
T Consensus 238 ~e~i~~ai~~GV~Ki 252 (307)
T 3n9r_A 238 FEFLQESVKGGINKV 252 (307)
T ss_dssp HHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHcCceEE
Confidence 666666666666555
No 226
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=84.63 E-value=36 Score=34.30 Aligned_cols=192 Identities=17% Similarity=0.167 Sum_probs=116.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+-
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la~ 89 (289)
T 2yxg_A 17 EVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVN-------GRVQVIAGAGSNCTEEAIELSV 89 (289)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCCCHHHHHHHHH
Confidence 367788889999999999999877 3 465666665 55555555542 3357888887655444 44432
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~aG 247 (623)
. ...+|++.+-+..|-. .+.|.++.++-..+..+ ..++..+-|+ |. .+...+++.+.++++ + -
T Consensus 90 ~-a~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La~---~-~ 154 (289)
T 2yxg_A 90 F-AEDVGADAVLSITPYY-------NKPTQEGLRKHFGKVAE---SINLPIVLYNVPSRTAVNLEPKTVKLLAE---E-Y 154 (289)
T ss_dssp H-HHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHH---HCSSCEEEEECHHHHSCCCCHHHHHHHHH---H-C
T ss_pred H-HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCcCCCHHHHHHHHH---h-C
Confidence 2 3446999887766532 24577776665555443 2355545554 32 234567787777753 2 2
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|-. .++.++++.. + ..+ +-.+++ ..+.++..|++.+ +.| .+|...+
T Consensus 155 pnivgiK~s~gd~--~~~~~~~~~~-----~---f~v-~~G~d~------~~~~~l~~G~~G~---is~----~~n~~P~ 210 (289)
T 2yxg_A 155 SNISAVKEANPNL--SQVSELIHDA-----K---ITV-LSGNDE------LTLPIIALGGKGV---ISV----VANIVPK 210 (289)
T ss_dssp TTEEEEEECCSCT--HHHHHHHHHT-----C---SEE-EESCGG------GHHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEeCCCCH--HHHHHHHHhC-----C---eEE-EECcHH------HHHHHHHCCCCEE---EeC----hhhhhHH
Confidence 5799999999853 4555555432 2 112 334443 2456778898653 333 4677777
Q ss_pred HHHHHHH
Q 006969 328 EVVMAFK 334 (623)
Q Consensus 328 evv~~L~ 334 (623)
.++...+
T Consensus 211 ~~~~l~~ 217 (289)
T 2yxg_A 211 EFVEMVN 217 (289)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665444
No 227
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=84.62 E-value=36 Score=34.36 Aligned_cols=177 Identities=17% Similarity=0.190 Sum_probs=104.3
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEec--CCCChh--------HHHHHHHHHHHhccccccCCCccceEEeecccchhhHHH
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGF--PAASKE--------DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKT 167 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGf--P~~s~~--------d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~ 167 (623)
=+.+.-+++++.|.++|.+.+=.++ |..++. .++.++++++.. |+ +.++- --....++.
T Consensus 49 ~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~--------Gl-~~~te--~~d~~~~~~ 117 (276)
T 1vs1_A 49 ESWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEA--------GL-PVVTE--VLDPRHVET 117 (276)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--------TC-CEEEE--CCCGGGHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHc--------CC-cEEEe--cCCHHHHHH
Confidence 3899999999999999999987664 555542 234444444443 22 22221 123455555
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcC
Q 006969 168 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 168 a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aG 247 (623)
..+. ++.+.| +..+. + +. +.++++-+.|+. |.++- +...+++.+...++.+...|
T Consensus 118 l~~~-----vd~~kI--gs~~~--------~---n~----~ll~~~a~~~kP-V~lk~--G~~~t~~ei~~Ave~i~~~G 172 (276)
T 1vs1_A 118 VSRY-----ADMLQI--GARNM--------Q---NF----PLLREVGRSGKP-VLLKR--GFGNTVEELLAAAEYILLEG 172 (276)
T ss_dssp HHHH-----CSEEEE--CGGGT--------T---CH----HHHHHHHHHTCC-EEEEC--CTTCCHHHHHHHHHHHHHTT
T ss_pred HHHh-----CCeEEE--Ccccc--------c---CH----HHHHHHHccCCe-EEEcC--CCCCCHHHHHHHHHHHHHcC
Confidence 4442 456555 32221 1 11 234444456776 77753 33357888888888888999
Q ss_pred CcEEeecC-cc-cc--cCHHHHHHH-HHHHHHhCCCCcceeEEE---eecCCcchHHHHHHHHHHhCCC--EEEecc
Q 006969 248 ATTLNIPD-TV-GI--TMPTEFGKL-IADIKANTPGIENVVIST---HCQNDLGLSTANTIAGACAGAR--QVEVTI 314 (623)
Q Consensus 248 a~~I~l~D-Tv-G~--~~P~~v~~l-i~~l~~~~~~~~~v~i~~---H~HND~GlAvANslaAv~aGA~--~Vd~Tv 314 (623)
...+.|+- -+ .+ ..++.+.-. +..+++.+. ++|.+ |.=.+.-+...-+++|+.+||+ .|+.=+
T Consensus 173 n~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~----lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 173 NWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATH----LPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp CCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBS----SCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhC----CCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 87777766 11 22 234444433 677887642 34532 4423333446677888999999 887754
No 228
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=84.53 E-value=37 Score=34.39 Aligned_cols=193 Identities=13% Similarity=0.126 Sum_probs=115.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+-
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la~ 89 (297)
T 2rfg_A 17 QVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQ-------GRVPVIAGAGSNNPVEAVRYAQ 89 (297)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC-------CCCeEEEccCCCCHHHHHHHHH
Confidence 367788889999999999999876 3 466666665 55555555543 2357888887655444 44432
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~aG 247 (623)
. ...+|++.+-+..|-. .+.|.+++++-..+..+. .++..+-|+ |. .+...+++.+.+++ + -
T Consensus 90 ~-A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 153 (297)
T 2rfg_A 90 H-AQQAGADAVLCVAGYY-------NRPSQEGLYQHFKMVHDA---IDIPIIVYNIPPRAVVDIKPETMARLA----A-L 153 (297)
T ss_dssp H-HHHHTCSEEEECCCTT-------TCCCHHHHHHHHHHHHHH---CSSCEEEEECHHHHSCCCCHHHHHHHH----T-S
T ss_pred H-HHhcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHh---cCCCEEEEeCccccCCCCCHHHHHHHH----c-C
Confidence 2 3446899887665532 245777766665554432 345545554 32 23456777776665 3 2
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|-. .++.++ ++..++ +..+ +-..+++ .+.++..|++.+ +.| .+|...+
T Consensus 154 pnIvgiKds~gd~--~~~~~~----~~~~~~--~f~v-~~G~d~~------~l~~l~~G~~G~---is~----~an~~P~ 211 (297)
T 2rfg_A 154 PRIVGVKDATTDL--ARISRE----RMLINK--PFSF-LSGDDMT------AIAYNASGGQGC---ISV----SANIAPA 211 (297)
T ss_dssp TTEEEEEECSCCT--THHHHH----HTTCCS--CCEE-EESCGGG------HHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEeCCCCH--HHHHHH----HHhcCC--CEEE-EeCcHHH------HHHHHHCCCCEE---Eec----HHHhhHH
Confidence 5799999999853 344443 333442 2222 3344332 455777898653 333 4567676
Q ss_pred HHHHHHH
Q 006969 328 EVVMAFK 334 (623)
Q Consensus 328 evv~~L~ 334 (623)
.++...+
T Consensus 212 ~~~~l~~ 218 (297)
T 2rfg_A 212 LYGQMQT 218 (297)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665544
No 229
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=84.42 E-value=43 Score=36.71 Aligned_cols=158 Identities=20% Similarity=0.248 Sum_probs=102.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
.+|..++..| +...+.|+|+|=+-|.. +++|...++.+.+..+.. ..+.+.| . +.+.++..-+.+..
T Consensus 189 ~ltekD~~dl-~~~~~~~vD~i~~sfVr-~a~dv~~~r~~l~~~~~~----i~IiaKI---E--~~eav~nldeIl~~-- 255 (499)
T 3hqn_D 189 AVSAKDRVDL-QFGVEQGVDMIFASFIR-SAEQVGDVRKALGPKGRD----IMIICKI---E--NHQGVQNIDSIIEE-- 255 (499)
T ss_dssp SSCHHHHHHH-HHHHHTTCSEEEETTCC-SHHHHHHHHHHHCGGGTT----SEEEEEE---C--SHHHHHTHHHHHHH--
T ss_pred CCCHHHHHHH-HHHHHcCCCEEEecCCC-CHHHHHHHHHHHHhcCCC----CeEEEEE---C--CHHHHHhHHHHHHh--
Confidence 3677888877 66678999999998874 677777777665432211 0112222 1 33444332122221
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------cccCCCCCCHHHHHHHHHHHHHcCCcE
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGATT 250 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~~eda~r~d~e~l~~~~~~~~~aGa~~ 250 (623)
.+. ++++-.|+=++ +..+++...-+++++.|+.+|+. |.+ |.....+-....+.+++.++.+ |+|.
T Consensus 256 sDg--ImVaRGDLgvE----i~~e~vp~~Qk~iI~~c~~agkp-Vi~ATQmLeSMi~~p~PTRAEvsDVanaV~d-G~Da 327 (499)
T 3hqn_D 256 SDG--IMVARGDLGVE----IPAEKVVVAQKILISKCNVAGKP-VICATQMLESMTYNPRPTRAEVSDVANAVFN-GADC 327 (499)
T ss_dssp SSE--EEEEHHHHHHH----SCHHHHHHHHHHHHHHHHHHTCC-EEEESSSSGGGGTSSSCCHHHHHHHHHHHHH-TCSE
T ss_pred CCc--EEEccccccCc----CCHHHHHHHHHHHHHHHHHcCCC-eEEeehhHHHhccCCCccHHHHHHHHHHHHc-CCcE
Confidence 343 45565565443 35778888889999999999986 554 2334556677888888887765 9999
Q ss_pred Eeec-CcccccCHHHHHHHHHHHHHh
Q 006969 251 LNIP-DTVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 251 I~l~-DTvG~~~P~~v~~li~~l~~~ 275 (623)
+.|. .|.-...|.+.-+.+..+.+.
T Consensus 328 vMLSgETA~G~yPveaV~~m~~I~~~ 353 (499)
T 3hqn_D 328 VMLSGETAKGKYPNEVVQYMARICLE 353 (499)
T ss_dssp EEESHHHHTCSCHHHHHHHHHHHHHH
T ss_pred EEEeccccCCCCHHHHHHHHHHHHHH
Confidence 9995 677788998877777666543
No 230
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=84.29 E-value=18 Score=36.63 Aligned_cols=137 Identities=15% Similarity=0.178 Sum_probs=79.8
Q ss_pred HHHHHHhHcCCCEEEEec---------CCCCh----hHHHHHHHHHHHhccccccCCCccceEEeec--cc--chh-hHH
Q 006969 105 DIARQLAKLGVDIIEAGF---------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICGLS--RC--NER-DIK 166 (623)
Q Consensus 105 ~Ia~~L~~~Gvd~IEvGf---------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~--r~--~~~-dI~ 166 (623)
.-|+.++++|||.|=+|. |...+ +....++.+++-.... +.++.+. .. +.+ -++
T Consensus 28 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~--------~vvaD~pfgsy~~s~~~a~~ 99 (275)
T 1o66_A 28 SFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNA--------MIVSDLPFGAYQQSKEQAFA 99 (275)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSS--------EEEEECCTTSSSSCHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCC--------eEEEECCCCCccCCHHHHHH
Confidence 347888999999998873 33222 2234556666543221 2333322 11 222 233
Q ss_pred HHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE----EcccC---------CCCC-C
Q 006969 167 TAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE----FSPED---------AGRS-D 232 (623)
Q Consensus 167 ~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~----f~~ed---------a~r~-d 232 (623)
.+.+.++ +|+..|++-... .+.+.|+.+.+.|+. |+ +.|.. -+|+ .
T Consensus 100 na~rl~k-aGa~aVklEdg~------------------e~~~~I~al~~agIp-V~gHiGLtPQs~~~~ggf~v~grt~~ 159 (275)
T 1o66_A 100 AAAELMA-AGAHMVKLEGGV------------------WMAETTEFLQMRGIP-VCAHIGLTPQSVFAFGGYKVQGRGGK 159 (275)
T ss_dssp HHHHHHH-TTCSEEEEECSG------------------GGHHHHHHHHHTTCC-EEEEEESCGGGTTC-----------C
T ss_pred HHHHHHH-cCCcEEEECCcH------------------HHHHHHHHHHHcCCC-eEeeeccCceeecccCCeEEEeChHH
Confidence 3444555 899999986641 234567777888886 43 22321 1232 3
Q ss_pred HHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCC
Q 006969 233 RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP 277 (623)
Q Consensus 233 ~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~ 277 (623)
.+.+++=++++.++||+.|.+.= .|. ++.+.+.+.++
T Consensus 160 a~~~i~rA~a~~eAGA~~ivlE~-----vp~---~~a~~it~~l~ 196 (275)
T 1o66_A 160 AQALLNDAKAHDDAGAAVVLMEC-----VLA---ELAKKVTETVS 196 (275)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEES-----CCH---HHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHcCCcEEEEec-----CCH---HHHHHHHHhCC
Confidence 47788888899999999999853 354 34556666664
No 231
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=84.29 E-value=12 Score=37.00 Aligned_cols=103 Identities=15% Similarity=0.145 Sum_probs=63.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCc-ceeEEEeecCCcchHHHHHHHHHH
Q 006969 229 GRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIE-NVVISTHCQNDLGLSTANTIAGAC 304 (623)
Q Consensus 229 ~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~-~v~i~~H~HND~GlAvANslaAv~ 304 (623)
+..+.+--..-++.+++.||+.|-+.=-+|. ..-..+.+-|+.+++..++.. +++|+.-.=+|- .=..-+..|.+
T Consensus 90 G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~e-ei~~a~~ia~~ 168 (239)
T 3ngj_A 90 GATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNE-EKVEVCKRCVA 168 (239)
T ss_dssp CCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHH-HHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHH-HHHHHHHHHHH
Confidence 3445555555667788889999887766775 334557777777777654311 344443322222 22234456789
Q ss_pred hCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 305 AGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 305 aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
+||+.|.+|-+ .+ .|++.+|++-...+.
T Consensus 169 aGADfVKTSTG-f~--~ggAt~~dv~lmr~~ 196 (239)
T 3ngj_A 169 AGAEYVKTSTG-FG--THGATPEDVKLMKDT 196 (239)
T ss_dssp HTCSEEECCCS-SS--SCCCCHHHHHHHHHH
T ss_pred HCcCEEECCCC-CC--CCCCCHHHHHHHHHh
Confidence 99999999843 22 477889887655443
No 232
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=84.25 E-value=7.7 Score=37.11 Aligned_cols=158 Identities=16% Similarity=0.142 Sum_probs=86.3
Q ss_pred HHHHHHHHhHcCCCEEEEecCCCChhHH----HHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCC
Q 006969 103 KLDIARQLAKLGVDIIEAGFPAASKEDF----EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (623)
Q Consensus 103 Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~----e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~ 178 (623)
-++.++.+.+.|++.|++..+..++.++ +.++.+.+..... + ++.+. .++++.+.++ |.+
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~-v~v~v------~~~~~~a~~~----gad 96 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREA-----G-VPFIV------NDDVELALNL----KAD 96 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHH-----T-CCEEE------ESCHHHHHHH----TCS
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHHc-----C-CeEEE------cCHHHHHHHc----CCC
Confidence 4677888999999999999776555443 3344443321100 1 12221 2466766665 889
Q ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEee---cC
Q 006969 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI---PD 255 (623)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l---~D 255 (623)
.||+ +..+. . +. +..+..|...+.+++ .+++. +..+.+.|+|.|.+ -|
T Consensus 97 ~v~l--~~~~~--------~----~~------~~~~~~g~~~~~~s~-----~t~~e----~~~a~~~g~d~v~~~~v~~ 147 (227)
T 2tps_A 97 GIHI--GQEDA--------N----AK------EVRAAIGDMILGVSA-----HTMSE----VKQAEEDGADYVGLGPIYP 147 (227)
T ss_dssp EEEE--CTTSS--------C----HH------HHHHHHTTSEEEEEE-----CSHHH----HHHHHHHTCSEEEECCSSC
T ss_pred EEEE--CCCcc--------C----HH------HHHHhcCCcEEEEec-----CCHHH----HHHHHhCCCCEEEECCCcC
Confidence 9987 32221 1 11 111223421244444 23443 34455789999985 34
Q ss_pred cccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 006969 256 TVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (623)
Q Consensus 256 TvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 313 (623)
|..- ..|.. -++++.+++.+++ +|+-. .-|....|...++++||+.|.+.
T Consensus 148 t~~~~~~~~~~~-~~~l~~~~~~~~~---~pvia----~GGI~~~nv~~~~~~Ga~gv~vg 200 (227)
T 2tps_A 148 TETKKDTRAVQG-VSLIEAVRRQGIS---IPIVG----IGGITIDNAAPVIQAGADGVSMI 200 (227)
T ss_dssp CCSSSSCCCCCT-THHHHHHHHTTCC---CCEEE----ESSCCTTTSHHHHHTTCSEEEES
T ss_pred CCCCCCCCCccC-HHHHHHHHHhCCC---CCEEE----EcCCCHHHHHHHHHcCCCEEEEh
Confidence 4321 22222 2455666665531 33433 25666667778888999998763
No 233
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=84.23 E-value=3.2 Score=40.61 Aligned_cols=195 Identities=15% Similarity=0.166 Sum_probs=100.7
Q ss_pred HHHHHHHHHHhHcCCCEEEEecCCC----ChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 101 KEKLDIARQLAKLGVDIIEAGFPAA----SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 101 e~Kl~Ia~~L~~~Gvd~IEvGfP~~----s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
.+-+++++.+.+.|++.|.+--+.. .+..++.++.+++... .|.+..-.-...++++.+++ +|
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~---------ipvi~~ggI~~~~~~~~~~~----~G 96 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQID---------IPFTVGGGIHDFETASELIL----RG 96 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCC---------SCEEEESSCCSHHHHHHHHH----TT
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCC---------CCEEEeCCCCCHHHHHHHHH----cC
Confidence 3568889999999999998743321 1224566666665321 24444333334566766655 48
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCe--EEEccc----------CCCCC-CHHHHHHHHHHH
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD--VEFSPE----------DAGRS-DRKFLYEILGEV 243 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~--V~f~~e----------da~r~-d~e~l~~~~~~~ 243 (623)
++.|++-... +. . .+.+.+.++ ..|.+. +..++- ..... ......+.++.+
T Consensus 97 ad~V~lg~~~----l~-----~----p~~~~~~~~---~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~ 160 (253)
T 1thf_D 97 ADKVSINTAA----VE-----N----PSLITQIAQ---TFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEV 160 (253)
T ss_dssp CSEEEESHHH----HH-----C----THHHHHHHH---HHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred CCEEEEChHH----Hh-----C----hHHHHHHHH---HcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHH
Confidence 8888752211 00 0 112222332 333211 222321 00100 001234666777
Q ss_pred HHcCCcEEeecCc--ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEEEeccCCccCc
Q 006969 244 IKVGATTLNIPDT--VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEVTINGIGER 320 (623)
Q Consensus 244 ~~aGa~~I~l~DT--vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~Vd~Tv~GlGER 320 (623)
.++|++.|.+-++ .|..... -.++++.+++.++ +|+-. .-|.. ..+...+.++||+.|-+ |=+=-
T Consensus 161 ~~~G~~~i~~~~~~~~g~~~g~-~~~~~~~l~~~~~----ipvia----~GGI~~~~d~~~~~~~Gadgv~v---Gsal~ 228 (253)
T 1thf_D 161 EKRGAGEILLTSIDRDGTKSGY-DTEMIRFVRPLTT----LPIIA----SGGAGKMEHFLEAFLAGADAALA---ASVFH 228 (253)
T ss_dssp HHTTCSEEEEEETTTTTSCSCC-CHHHHHHHGGGCC----SCEEE----ESCCCSHHHHHHHHHTTCSEEEE---SHHHH
T ss_pred HHCCCCEEEEEeccCCCCCCCC-CHHHHHHHHHhcC----CCEEE----ECCCCCHHHHHHHHHcCChHHHH---HHHHH
Confidence 7899998887643 2433221 1346666666542 33432 25555 37777888899988632 21101
Q ss_pred cCcccHHHHHHHHHhc
Q 006969 321 AGNASLEEVVMAFKCR 336 (623)
Q Consensus 321 aGNa~lEevv~~L~~~ 336 (623)
.+--++++.+..|+..
T Consensus 229 ~~~~~~~~~~~~l~~~ 244 (253)
T 1thf_D 229 FREIDVRELKEYLKKH 244 (253)
T ss_dssp TTCSCHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHc
Confidence 1222677777777653
No 234
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=84.12 E-value=19 Score=37.36 Aligned_cols=139 Identities=11% Similarity=0.064 Sum_probs=80.2
Q ss_pred chhhHHHHHHHHhcCCCCEEEEEecC-CHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCeEEE----cccCCCCCCHH
Q 006969 161 NERDIKTAWEAVKYAKRPRIHTFIAT-SGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVEF----SPEDAGRSDRK 234 (623)
Q Consensus 161 ~~~dI~~a~eal~~a~~~~v~i~~~~-Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~~V~f----~~eda~r~d~e 234 (623)
.++++..+.+.+..+|.+.|.+-.+. +.......+|-+.....+.+.+.++..++. ++. |.+ +..+ ..+.+
T Consensus 68 ~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~P-V~vKiR~g~~~--~~~~~ 144 (350)
T 3b0p_A 68 DPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVP-VTVKMRLGLEG--KETYR 144 (350)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSC-EEEEEESCBTT--CCCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCc-eEEEEecCcCc--cccHH
Confidence 45677777777777899998887642 222333334444333345555555555553 554 433 3322 23456
Q ss_pred HHHHHHHHHHHcCCcEEeecCcc---cccCHH-------HHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHH
Q 006969 235 FLYEILGEVIKVGATTLNIPDTV---GITMPT-------EFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGA 303 (623)
Q Consensus 235 ~l~~~~~~~~~aGa~~I~l~DTv---G~~~P~-------~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv 303 (623)
.+.++++.+.++|++.|.+-+-. |+ .|. --.+++..+++.+|+ +||..=. |.. ...+..++
T Consensus 145 ~~~~~a~~l~~aG~d~I~V~~r~~~~g~-~g~~~~~~~~~~~~~i~~ik~~~~~---iPVianG----gI~s~eda~~~l 216 (350)
T 3b0p_A 145 GLAQSVEAMAEAGVKVFVVHARSALLAL-STKANREIPPLRHDWVHRLKGDFPQ---LTFVTNG----GIRSLEEALFHL 216 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTT---SEEEEES----SCCSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCchhccc-CcccccCCCcccHHHHHHHHHhCCC---CeEEEEC----CcCCHHHHHHHH
Confidence 78899999999999999986533 22 221 135678888888853 5555433 221 23334444
Q ss_pred HhCCCEEE
Q 006969 304 CAGARQVE 311 (623)
Q Consensus 304 ~aGA~~Vd 311 (623)
+ ||+.|-
T Consensus 217 ~-GaD~V~ 223 (350)
T 3b0p_A 217 K-RVDGVM 223 (350)
T ss_dssp T-TSSEEE
T ss_pred h-CCCEEE
Confidence 4 888773
No 235
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=84.10 E-value=3.9 Score=40.26 Aligned_cols=67 Identities=19% Similarity=0.372 Sum_probs=51.4
Q ss_pred HHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCc
Q 006969 240 LGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI 317 (623)
Q Consensus 240 ~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~Gl 317 (623)
++.+.++|||.|.| |+.-...|..+.++++.+++. + +.+..=+|+ ...+..|.++||+.|=+++.|+
T Consensus 94 i~~~~~~Gad~V~l-~~~~~~~p~~l~~~i~~~~~~--g---~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~ 160 (232)
T 3igs_A 94 VDALAQAGAAIIAV-DGTARQRPVAVEALLARIHHH--H---LLTMADCSS-----VDDGLACQRLGADIIGTTMSGY 160 (232)
T ss_dssp HHHHHHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT--T---CEEEEECCS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHcCCCEEEE-CccccCCHHHHHHHHHHHHHC--C---CEEEEeCCC-----HHHHHHHHhCCCCEEEEcCccC
Confidence 45677899998855 777777899999999999874 2 456666675 5667889999999996556554
No 236
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=84.06 E-value=10 Score=38.79 Aligned_cols=105 Identities=14% Similarity=0.069 Sum_probs=71.2
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCH------HHHHHHHHHHHHhCCCC-cceeEEEeecCCcchHHHHHH
Q 006969 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMP------TEFGKLIADIKANTPGI-ENVVISTHCQNDLGLSTANTI 300 (623)
Q Consensus 228 a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P------~~v~~li~~l~~~~~~~-~~v~i~~H~HND~GlAvANsl 300 (623)
.+....+--..-++.+++.||+.|-+.=-.|.+.- +.+.+-|+.+++..++. =+++|+.-.=+|.-.=..-+.
T Consensus 94 ~G~~~~e~K~~Ea~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~Lt~~e~i~~A~~ 173 (297)
T 4eiv_A 94 EGTGTPDTVSLEAVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGELQGGDIISRAAV 173 (297)
T ss_dssp TCCCCHHHHHHHHHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHHH
Confidence 33455555555566778889999988777777654 34556666777654321 146666555555554445678
Q ss_pred HHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 301 AGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 301 aAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
.|+++||+.|-+|-+ . ..|++.+|.+..+++.
T Consensus 174 ia~~AGADFVKTSTG-f--~~~gAT~edV~lM~~~ 205 (297)
T 4eiv_A 174 AALEGGADFLQTSSG-L--GATHATMFTVHLISIA 205 (297)
T ss_dssp HHHHHTCSEEECCCS-S--SSCCCCHHHHHHHHHH
T ss_pred HHHHhCCCEEEcCCC-C--CCCCCCHHHHHHHHHH
Confidence 899999999998854 3 3688999988766654
No 237
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=83.93 E-value=40 Score=34.27 Aligned_cols=191 Identities=15% Similarity=0.188 Sum_probs=117.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+-
T Consensus 33 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~st~~ai~la~ 105 (304)
T 3cpr_A 33 DIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVG-------DRAKLIAGVGTNNTRTSVELAE 105 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT-------TTSEEEEECCCSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEecCCCCCHHHHHHHHH
Confidence 478888899999999999998876 4 466666665 55555555542 3357888887655444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~aG 247 (623)
. ...+|++.+-+..|-. .+.+.++.++-..+..+ ..++..+-|+ |. .+...+++.+.+++ + -
T Consensus 106 ~-A~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 169 (304)
T 3cpr_A 106 A-AASAGADGLLVVTPYY-------SKPSQEGLLAHFGAIAA---ATEVPICLYDIPGRSGIPIESDTMRRLS----E-L 169 (304)
T ss_dssp H-HHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHH---HCCSCEEEEECHHHHSSCCCHHHHHHHT----T-S
T ss_pred H-HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCcCCCHHHHHHHH----c-C
Confidence 3 3557999887766532 24566666665554443 3355545554 32 23456777776664 2 2
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|- ..++.++++.. .+ .+ +-.++++ .+.++..|++.+ +.| .+|...+
T Consensus 170 pnIvgiKdssgd--~~~~~~~~~~~--~f------~v-~~G~d~~------~l~~l~~G~~G~---is~----~an~~P~ 225 (304)
T 3cpr_A 170 PTILAVXDAKGD--LVAATSLIKET--GL------AW-YSGDDPL------NLVWLALGGSGF---ISV----IGHAAPT 225 (304)
T ss_dssp TTEEEEEECSCC--HHHHHHHHHHH--CC------EE-EECSGGG------HHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEecCCCC--HHHHHHHHHhc--CE------EE-EECcHHH------HHHHHHCCCCEE---Eec----HHHhhHH
Confidence 579999999984 35666666543 22 12 3344432 455677897654 333 4567676
Q ss_pred HHHHHHH
Q 006969 328 EVVMAFK 334 (623)
Q Consensus 328 evv~~L~ 334 (623)
.++...+
T Consensus 226 ~~~~l~~ 232 (304)
T 3cpr_A 226 ALRELYT 232 (304)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665444
No 238
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=83.59 E-value=37 Score=33.66 Aligned_cols=95 Identities=17% Similarity=0.080 Sum_probs=61.7
Q ss_pred HHHHHhcCCCCEEEEEecCCHH-----HHH------HHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEEcccCCCCCCHH
Q 006969 168 AWEAVKYAKRPRIHTFIATSGI-----HME------HKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPEDAGRSDRK 234 (623)
Q Consensus 168 a~eal~~a~~~~v~i~~~~Sd~-----h~~------~~l~~t~ee~l~~~~~~v~~ak~~--G~~~V~f~~eda~r~d~e 234 (623)
.++.+.++|++.|.+=+|.||- .++ .+-|.+.+..++ .++..|+. ... +.+- +..++-
T Consensus 36 ~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~----~v~~ir~~~~~~P-i~~m----~y~n~v 106 (262)
T 2ekc_A 36 AFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLE----LSETLRKEFPDIP-FLLM----TYYNPI 106 (262)
T ss_dssp HHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHH----HHHHHHHHCTTSC-EEEE----CCHHHH
T ss_pred HHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHH----HHHHHHhhcCCCC-EEEE----ecCcHH
Confidence 3456677899999988888751 121 234566555554 45555554 444 3331 223333
Q ss_pred HH---HHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHh
Q 006969 235 FL---YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 235 ~l---~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~ 275 (623)
+- .++++.+.++|++.+.++| +.+++..+++..++++
T Consensus 107 ~~~g~~~f~~~~~~aG~dgvii~d----l~~ee~~~~~~~~~~~ 146 (262)
T 2ekc_A 107 FRIGLEKFCRLSREKGIDGFIVPD----LPPEEAEELKAVMKKY 146 (262)
T ss_dssp HHHCHHHHHHHHHHTTCCEEECTT----CCHHHHHHHHHHHHHT
T ss_pred HHhhHHHHHHHHHHcCCCEEEECC----CCHHHHHHHHHHHHHc
Confidence 33 4778889999999999998 4568888999988875
No 239
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=83.33 E-value=3.9 Score=43.09 Aligned_cols=72 Identities=14% Similarity=0.078 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEE-eecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 234 KFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVIST-HCQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~-H~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
+...+.++++.++|++.|.+-=+.|. +..+.+.|+++++.+|+ ++|.. -+ .-...+..++++|||.|.+
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~--~~~~~e~I~~ir~~~~~---~~Vi~G~V-----~T~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAH--AKYVGKTLKSLRQLLGS---RCIMAGNV-----ATYAGADYLASCGADIIKA 168 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCS--SHHHHHHHHHHHHHHTT---CEEEEEEE-----CSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCC--cHhHHHHHHHHHHhcCC---CeEEEcCc-----CCHHHHHHHHHcCCCEEEE
Confidence 55678899999999997766223443 56678899999998874 34443 12 2356788999999999998
Q ss_pred ccC
Q 006969 313 TIN 315 (623)
Q Consensus 313 Tv~ 315 (623)
++.
T Consensus 169 g~g 171 (361)
T 3r2g_A 169 GIG 171 (361)
T ss_dssp CCS
T ss_pred cCC
Confidence 644
No 240
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=82.96 E-value=35 Score=33.00 Aligned_cols=180 Identities=18% Similarity=0.145 Sum_probs=93.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEee--cccc-hhhHHHHHHHHh
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL--SRCN-ERDIKTAWEAVK 173 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~--~r~~-~~dI~~a~eal~ 173 (623)
..|.++-.++.+...+.|++.+-+ +|.. ++...+.+. .+ .+..+.++ +... ...+..+-+++
T Consensus 16 ~~t~~~i~~l~~~a~~~g~~~v~v-~~~~-------v~~~~~~l~-~v-----~v~~v~~~P~g~~~~~~k~~~~~~A~- 80 (225)
T 1mzh_A 16 HLSEKEIEEFVLKSEELGIYAVCV-NPYH-------VKLASSIAK-KV-----KVCCVIGFPLGLNKTSVKVKEAVEAV- 80 (225)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEE-CGGG-------HHHHHHHCS-SS-----EEEEEESTTTCCSCHHHHHHHHHHHH-
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEE-CHHH-------HHHHHHHhc-CC-----ceeeEecCCCCccchhhhHHHHHHHH-
Confidence 468999999999999999998875 4432 333333221 10 01111121 1111 11122222222
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 006969 174 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 253 (623)
Q Consensus 174 ~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l 253 (623)
..|.+.|.+.+..+-. .....++.++.+...++.+. ++ .|-+-.|.. ..+.+.+.++++.+.++|+|.| -
T Consensus 81 ~~Gad~Id~viN~g~~-----~~~~~~~~~~~i~~v~~a~~--pv-~vKvi~e~~-~l~~~~~~~~a~~a~eaGad~I-~ 150 (225)
T 1mzh_A 81 RDGAQELDIVWNLSAF-----KSEKYDFVVEELKEIFRETP--SA-VHKVIVETP-YLNEEEIKKAVEICIEAGADFI-K 150 (225)
T ss_dssp HTTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHTCT--TS-EEEEECCGG-GCCHHHHHHHHHHHHHHTCSEE-E
T ss_pred HcCCCEEEEEecHHHH-----hcCChHHHHHHHHHHHHHhc--Cc-eEEEEEeCC-CCCHHHHHHHHHHHHHhCCCEE-E
Confidence 3589999976655431 11233444444333333222 33 244422211 2466789999999999999999 3
Q ss_pred cCc---ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 254 PDT---VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 254 ~DT---vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
..| .|..+++.+.. +++.+++ ++||-.=.=-.. ...++..+++||++|
T Consensus 151 tstg~~~gga~~~~i~~----v~~~v~~--~ipVia~GGI~t---~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 151 TSTGFAPRGTTLEEVRL----IKSSAKG--RIKVKASGGIRD---LETAISMIEAGADRI 201 (225)
T ss_dssp CCCSCSSSCCCHHHHHH----HHHHHTT--SSEEEEESSCCS---HHHHHHHHHTTCSEE
T ss_pred ECCCCCCCCCCHHHHHH----HHHHhCC--CCcEEEECCCCC---HHHHHHHHHhCchHH
Confidence 344 23345554444 4443321 234433221111 367788888999976
No 241
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=82.69 E-value=4.8 Score=39.77 Aligned_cols=196 Identities=16% Similarity=0.097 Sum_probs=92.5
Q ss_pred HHHHHHHHHhHcCCCEEEEecCCCC----hhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCC
Q 006969 102 EKLDIARQLAKLGVDIIEAGFPAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (623)
Q Consensus 102 ~Kl~Ia~~L~~~Gvd~IEvGfP~~s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~ 177 (623)
+-+++++.+.+.|++.|++--+... ..+++.++.+++... .|.+.+-.-...++++.++++ |+
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~---------iPvi~~ggi~~~~~i~~~~~~----Ga 97 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT---------LPIIASGGAGKMEHFLEAFLA----GA 97 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCC---------SCEEEESCCCSTHHHHHHHHH----TC
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcC---------CCEEEECCCCCHHHHHHHHHc----CC
Confidence 4578899999999999999544321 224677777765421 244443222245677776664 88
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CCeEEEccc------------CCCCC-CHHHHHHHHHH
Q 006969 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLG--CDDVEFSPE------------DAGRS-DRKFLYEILGE 242 (623)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G--~~~V~f~~e------------da~r~-d~e~l~~~~~~ 242 (623)
+.|++-...- .. +...+.+.+.++ ..| ...+.++.. ..... ......+.++.
T Consensus 98 d~v~lg~~~~--~~--------~~~~~~~~~~~~---~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~ 164 (266)
T 2w6r_A 98 DKALAASVFH--FR--------EIDMRELKEYLK---KHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVE 164 (266)
T ss_dssp SEEECCCCC----------------CHHHHHHCC-------CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHH
T ss_pred cHhhhhHHHH--hC--------CCCHHHHHHHHH---HcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHH
Confidence 8887643221 00 001122233322 333 222222110 01100 00013456677
Q ss_pred HHHcCCcEEeecC--cccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEEEeccCCccC
Q 006969 243 VIKVGATTLNIPD--TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEVTINGIGE 319 (623)
Q Consensus 243 ~~~aGa~~I~l~D--TvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~Vd~Tv~GlGE 319 (623)
+.++|++.|.+.+ ..|...+.. -++++.+++.++ +|+-.= .|.. ..+....+++||+.|-+.= +=
T Consensus 165 ~~~~G~~~i~~t~~~~~g~~~g~~-~~~i~~l~~~~~----ipvia~----GGI~~~ed~~~~~~~Gadgv~vgs---al 232 (266)
T 2w6r_A 165 VEKRGAGEILLTSIDRDGTKSGYD-TEMIRFVRPLTT----LPIIAS----GGAGKMEHFLEAFLAGADAALAAS---VF 232 (266)
T ss_dssp HHHTTCSEEEEEETTTTTTCSCCC-HHHHHHHGGGCC----SCEEEE----SCCCSHHHHHHHHHHTCSEEEEST---TT
T ss_pred HHHcCCCEEEEEeecCCCCcCCCC-HHHHHHHHHHcC----CCEEEe----CCCCCHHHHHHHHHcCCHHHHccH---HH
Confidence 7789999999854 335433221 356777777652 233321 4555 3677777788998763321 11
Q ss_pred ccCcccHHHHHHHHHh
Q 006969 320 RAGNASLEEVVMAFKC 335 (623)
Q Consensus 320 RaGNa~lEevv~~L~~ 335 (623)
-.+.-+++++...|..
T Consensus 233 ~~~~~~~~~~~~~l~~ 248 (266)
T 2w6r_A 233 HFREIDMRELKEYLKK 248 (266)
T ss_dssp C---------------
T ss_pred HcCCCCHHHHHHHHHH
Confidence 1122356666665554
No 242
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=82.67 E-value=3.2 Score=42.68 Aligned_cols=109 Identities=15% Similarity=0.115 Sum_probs=69.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCccc-----------ccCHHHH
Q 006969 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEF 265 (623)
Q Consensus 197 ~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG-----------~~~P~~v 265 (623)
.|.+|++..+....+-+. ... |..+.+.++ -+++.+.+.++.+.++|+..|.|-|.++ ...++++
T Consensus 62 vt~~em~~~~~~I~~~~~--~~P-viaD~d~Gy-g~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~ 137 (302)
T 3fa4_A 62 CTLNDMRANAEMISNISP--STP-VIADADTGY-GGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTY 137 (302)
T ss_dssp CCHHHHHHHHHHHHTTST--TSC-EEEECTTTT-SSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHH
T ss_pred CCHHHHHHHHHHHHhhcc--CCC-EEEECCCCC-CCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHH
Confidence 577887776554443222 344 778886654 4688899999999999999999999985 2345666
Q ss_pred HHHHHHHHHhCC--CCcceeEEEeec----CCcchHHHHHHHHHHhCCCEE
Q 006969 266 GKLIADIKANTP--GIENVVISTHCQ----NDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 266 ~~li~~l~~~~~--~~~~v~i~~H~H----ND~GlAvANslaAv~aGA~~V 310 (623)
.+.|+..++.-. +. +..|-.=+- .++--|+.-+.+.++||||.|
T Consensus 138 ~~rI~Aa~~A~~~~~~-d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~i 187 (302)
T 3fa4_A 138 VTRIRAAVQARQRIGS-DIVVIARTDSLQTHGYEESVARLRAARDAGADVG 187 (302)
T ss_dssp HHHHHHHHHHHHHHTC-CCEEEEEECCHHHHCHHHHHHHHHHHHTTTCSEE
T ss_pred HHHHHHHHHHHHhcCC-CEEEEEEecccccCCHHHHHHHHHHHHHcCCCEE
Confidence 677766654321 11 133333332 223335666667788888876
No 243
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=82.56 E-value=28 Score=35.49 Aligned_cols=105 Identities=8% Similarity=0.013 Sum_probs=62.2
Q ss_pred HHHHhcCC--CCEEEEEecCC-H-HHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE--cccC-CCCCCHHHHHHHHH
Q 006969 169 WEAVKYAK--RPRIHTFIATS-G-IHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF--SPED-AGRSDRKFLYEILG 241 (623)
Q Consensus 169 ~eal~~a~--~~~v~i~~~~S-d-~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f--~~ed-a~r~d~e~l~~~~~ 241 (623)
++.++.+| ...+.+.+-.. + .|.+.. +......++.+.+.++.+++.|.. |.+ .... ....+ +.++++
T Consensus 185 l~~L~~~g~~~~~l~isld~~~~e~~~~i~-~~~~~~~~~~~~~~i~~l~~~g~~-v~i~~~l~~g~n~~~---~~~l~~ 259 (342)
T 2yx0_A 185 LEEMIKEDKLPTQLYVSITAPDIETYNSVN-IPMIPDGWERILRFLELMRDLPTR-TVVRLTLVKGENMHS---PEKYAK 259 (342)
T ss_dssp HHHHHHTTCCCSEEEEEECCSSHHHHHHHH-CBSSSCHHHHHHHHHHHHTTCSSE-EEEEEEECTTTTCCC---HHHHHH
T ss_pred HHHHHhcCCCCCEEEEEccCCCHHHHHHHh-CCCcccHHHHHHHHHHHHHhCCCC-EEEEEEEECCccHHH---HHHHHH
Confidence 44455555 77888876664 3 333222 211123456777788888888864 433 2211 12223 556666
Q ss_pred HHHHcCCcEEeec------Cc------ccccCHHHHHHHHHHHHHhCCC
Q 006969 242 EVIKVGATTLNIP------DT------VGITMPTEFGKLIADIKANTPG 278 (623)
Q Consensus 242 ~~~~aGa~~I~l~------DT------vG~~~P~~v~~li~~l~~~~~~ 278 (623)
.+.+.|++.|.+- .+ ....+++++.++.+.+++.+|+
T Consensus 260 ~l~~~~~~~i~l~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~l~~~l~~ 308 (342)
T 2yx0_A 260 LILKARPMFVEAKAYMFVGYSRNRLTINNMPSHQDIREFAEALVKHLPG 308 (342)
T ss_dssp HHHHHCCSEEEEEECC------CCCCGGGSCCHHHHHHHHHHHHTTCTT
T ss_pred HHHHcCCCEEEEEeeeecCCCcccccccCCCCHHHHHHHHHHHHHhccC
Confidence 6677898877641 11 2245678899999999998875
No 244
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=82.55 E-value=11 Score=42.20 Aligned_cols=188 Identities=14% Similarity=0.105 Sum_probs=103.4
Q ss_pred EeCC----CcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCC----hhHH-HHHHHHHHHhccccccCCCccce
Q 006969 83 FDTT----LRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAAS----KEDF-EAVRTIAKEVGNAVDAESGYVPV 153 (623)
Q Consensus 83 ~DtT----LRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s----~~d~-e~v~~i~~~~~~~~~~~~~l~~~ 153 (623)
+.+| ++||.+. .+.+.-++.++.+.+.|-|+|.+| |++. ++++ ..++.+.+.. . +|
T Consensus 322 ~N~Tg~dsf~~~~~~----~~~~~a~~~A~~~v~~GAdiIDIg-pg~~~v~~~ee~~rvv~~i~~~~--------~-vp- 386 (566)
T 1q7z_A 322 INPAGRKKLWAEMQK----GNEEIVIKEAKTQVEKGAEVLDVN-FGIESQIDVRYVEKIVQTLPYVS--------N-VP- 386 (566)
T ss_dssp ECCTTCHHHHHHHHT----TCCHHHHHHHHHHHHTTCSEEEEE-CSSGGGSCHHHHHHHHHHHHHHT--------C-SC-
T ss_pred ecCCCChhHHHHhhc----CCHHHHHHHHHHHHHCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHhhC--------C-ce-
Confidence 5677 6676543 467999999999999999999999 5542 2233 2333333321 1 12
Q ss_pred EEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCC-CCCC
Q 006969 154 ICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA-GRSD 232 (623)
Q Consensus 154 i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda-~r~d 232 (623)
|+. --.+.+-+++++++.. |.+.|. ++|- . + +.+.++.+.++++|.. |...+.+. ...+
T Consensus 387 isI-DT~~~~v~eaal~~~~--G~~iIN---dis~--------~---~--~~~~~~~~~~~~~g~~-vV~m~~~~~~p~t 446 (566)
T 1q7z_A 387 LSL-DIQNVDLTERALRAYP--GRSLFN---SAKV--------D---E--EELEMKINLLKKYGGT-LIVLLMGKDVPKS 446 (566)
T ss_dssp EEE-ECCCHHHHHHHHHHCS--SCCEEE---EEES--------C---H--HHHHHHHHHHHHHCCE-EEEESCSSSCCCS
T ss_pred EEE-eCCCHHHHHHHHHhcC--CCCEEE---ECCc--------c---h--hhHHHHHHHHHHhCCe-EEEEeCCCCCcCC
Confidence 222 1235666777777642 666554 3321 0 1 2334667777888985 55544443 1111
Q ss_pred ----HHHHHHHHHHHHHcCC-cEEee---cCcccccC-HHHHHHHHHHHHHhCCCCcceeEEEeecCC-------cchHH
Q 006969 233 ----RKFLYEILGEVIKVGA-TTLNI---PDTVGITM-PTEFGKLIADIKANTPGIENVVISTHCQND-------LGLST 296 (623)
Q Consensus 233 ----~e~l~~~~~~~~~aGa-~~I~l---~DTvG~~~-P~~v~~li~~l~~~~~~~~~v~i~~H~HND-------~GlAv 296 (623)
.+++.+.++.+.++|. +.|.| ..++|... -.++-+-++.+++. + .|+.+=..|- -.+.-
T Consensus 447 ~~~~~~~l~~~~~~a~~~Gi~~~IilDPg~~~igfgk~~~~~l~~~~~~~~~--g---~p~l~G~Snksf~~~~~~~l~~ 521 (566)
T 1q7z_A 447 FEERKEYFEKALKILERHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISSK--G---FNTTVGLSNLSFGLPDRSYYNT 521 (566)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGEEEECCCCCTTTTCCHHHHHHHHHHHHHT--T---CEECCBGGGGSTTSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCcEEEeCCCCcccCcHHHHHHHHHHHHHHhC--C---CCEEEEeCcccccCCHHHHHHH
Confidence 5678888888999998 44443 24556665 12223334445443 2 3333323332 12222
Q ss_pred HHHHHHHHhCCCEE
Q 006969 297 ANTIAGACAGARQV 310 (623)
Q Consensus 297 ANslaAv~aGA~~V 310 (623)
.-+..|+++|++.+
T Consensus 522 t~a~~a~~~G~~i~ 535 (566)
T 1q7z_A 522 AFLVLGISKGLSSA 535 (566)
T ss_dssp HHHHHHHHTTCCEE
T ss_pred HHHHHHHHcCCCEE
Confidence 22245677777765
No 245
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=82.55 E-value=12 Score=38.28 Aligned_cols=98 Identities=7% Similarity=0.007 Sum_probs=50.3
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCC
Q 006969 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGA 248 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa 248 (623)
++.+...|++.|-+..++.+.. -.|.+|-.+.++.+++.+ |...|..+ .+..+....++.++.+.++||
T Consensus 35 v~~li~~Gv~Gl~v~GtTGE~~-----~Lt~~Er~~v~~~~v~~~---grvpViaG---vg~~~t~~ai~la~~A~~~Ga 103 (313)
T 3dz1_A 35 TDFYAEVGCEGVTVLGILGEAP-----KLDAAEAEAVATRFIKRA---KSMQVIVG---VSAPGFAAMRRLARLSMDAGA 103 (313)
T ss_dssp HHHHHHTTCSEEEESTGGGTGG-----GSCHHHHHHHHHHHHHHC---TTSEEEEE---CCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHCCCCEEEeCccCcChh-----hCCHHHHHHHHHHHHHHc---CCCcEEEe---cCCCCHHHHHHHHHHHHHcCC
Confidence 3444445666665555555532 245666555555555544 21123332 223455566666666666666
Q ss_pred cEEeecCcccccCHHHHHHHHHHHHHhCC
Q 006969 249 TTLNIPDTVGITMPTEFGKLIADIKANTP 277 (623)
Q Consensus 249 ~~I~l~DTvG~~~P~~v~~li~~l~~~~~ 277 (623)
|.+.+.=-.-..+++++.+.++.+.+..+
T Consensus 104 davlv~~P~~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 104 AGVMIAPPPSLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp SEEEECCCTTCCSHHHHHHHHHHHHHHHC
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHhCC
Confidence 65544322223455566666666665543
No 246
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=82.53 E-value=20 Score=34.82 Aligned_cols=200 Identities=12% Similarity=0.024 Sum_probs=107.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
.|-.+-...+-+.+.+.|++.+-.........+.+.++.+... .++ + |... .......+..++.+...+
T Consensus 18 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~---~vd---g----iIi~-~~~~~~~~~~~~~~~~~~ 86 (291)
T 3l49_A 18 DWDLKAYQAQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQ---KPD---A----IIEQ-LGNLDVLNPWLQKINDAG 86 (291)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHH---CCS---E----EEEE-SSCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHc---CCC---E----EEEe-CCChhhhHHHHHHHHHCC
Confidence 3445667778888899999876654332222334556665543 111 1 2111 122223444455566679
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH--cCCCeEEE-cccCCCCCCHHHHHHHHHHHHHc-CCcEEe
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS--LGCDDVEF-SPEDAGRSDRKFLYEILGEVIKV-GATTLN 252 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~--~G~~~V~f-~~eda~r~d~e~l~~~~~~~~~a-Ga~~I~ 252 (623)
++.|.+-....+ . ......+ +.+....+++++.+ .|...|.| ..........+.+.-+.+++.+. |...+.
T Consensus 87 iPvV~~~~~~~~-~-~~~V~~D---~~~~g~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~ 161 (291)
T 3l49_A 87 IPLFTVDTATPH-A-INNTTSN---NYSIGAELALQMVADLGGKGNVLVFNGFYSVPVCKIRYDQMKYVLEAFPDVKIIE 161 (291)
T ss_dssp CCEEEESCCCTT-C-SEEEEEC---HHHHHHHHHHHHHHHHTTCEEEEEECSCTTSHHHHHHHHHHHHHHHTCTTEEECS
T ss_pred CcEEEecCCCCC-c-CceEecC---hHHHHHHHHHHHHHHcCCCceEEEEeCCCCCchHHHHHHHHHHHHHHCCCCEEEe
Confidence 998766433221 0 0011222 23455677788888 78766655 22122222334555556666666 333221
Q ss_pred ec-CcccccCHHHHHHHHHHHHHhCC---CCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccC
Q 006969 253 IP-DTVGITMPTEFGKLIADIKANTP---GIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGE 319 (623)
Q Consensus 253 l~-DTvG~~~P~~v~~li~~l~~~~~---~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGE 319 (623)
-. -..+...+....+.+..+.+..| +.+ .+=|.||. +|.+-..+.-++|-+ |.+|.|++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----ai~~~~d~-~a~g~~~al~~~g~~--di~vvg~d~ 225 (291)
T 3l49_A 162 PELRDVIPNTIQSAYSNVTDMLTKYPNEGDVG----AIWACWDV-PMIGATQALQAAGRT--DIRTYGVDG 225 (291)
T ss_dssp SCBCCCSSSHHHHHHHHHHHHHHHCCSTTSCC----EEEESSHH-HHHHHHHHHHHTTCC--SCEEEEEEC
T ss_pred eeccCCCCCCHHHHHHHHHHHHHhCCCcCCcC----EEEECCCc-hHHHHHHHHHHcCCC--CeEEEEecC
Confidence 10 01233456777778877777766 433 34477763 555555566678988 999998763
No 247
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=82.46 E-value=19 Score=39.68 Aligned_cols=159 Identities=20% Similarity=0.268 Sum_probs=103.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
.+|.+|+..|.+.-.+.|+|+|=+-|.. +++|...++.+.+..+.. ..+.+.| . +.+.++..-+.+..+
T Consensus 213 ~lTekD~~dl~~f~~~~~vD~Ia~SFVr-~a~Dv~~~r~~l~~~g~~----i~IIAKI---E--~~eav~nldeIl~~s- 281 (520)
T 3khd_A 213 IISEKDKNDILNFAIPMGCNFIAASFIQ-SADDVRLIRNLLGPRGRH----IKIIPKI---E--NIEGIIHFDKILAES- 281 (520)
T ss_dssp SSCHHHHHHHHHTHHHHTCCEEEETTCC-SHHHHHHHHHHHTTTTTT----SEEEEEE---C--SHHHHHTHHHHHHHS-
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCC-CHHHHHHHHHHHHhcCCC----CcEEEEE---C--CHHHHHhHHHHHHhC-
Confidence 4788999999788889999999998874 677777777765532211 0112222 1 334443321222212
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------cccCCCCCCHHHHHHHHHHHHHcCCcE
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGATT 250 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~~eda~r~d~e~l~~~~~~~~~aGa~~ 250 (623)
+. ++++-.|+=+ -+..+++...-+.+++.|+.+|+. |.. |.....+-....+.+++.++.+ |+|.
T Consensus 282 -DG--IMVARGDLgv----Ei~~e~vp~~Qk~iI~~c~~aGKP-Vi~ATQMLeSMi~~p~PTRAEvsDVanAVld-GaDa 352 (520)
T 3khd_A 282 -DG--IMIARGDLGM----EISPEKVFLAQKLMISKCNLQGKP-IITATQMLESMTKNPRPTRAEVTDVANAVLD-GTDC 352 (520)
T ss_dssp -SC--EEECHHHHTT----TSCGGGHHHHHHHHHHHHHHHTCC-EEECCCCCGGGGTCSSCCHHHHHHHHHHHHH-TCSE
T ss_pred -Cc--EEEccccccc----cCCHHHHHHHHHHHHHHHHHcCCC-eEEeehhhHHHhcCCCccHHHHHHHHHHHHh-CCCE
Confidence 33 4445444211 234567777778999999999986 554 2334556677888888888765 9999
Q ss_pred Eeec-CcccccCHHHHHHHHHHHHHh
Q 006969 251 LNIP-DTVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 251 I~l~-DTvG~~~P~~v~~li~~l~~~ 275 (623)
|.|. .|.-...|.+.-+.+..+.+.
T Consensus 353 vMLSgETA~G~yPveaV~~M~~I~~~ 378 (520)
T 3khd_A 353 VMLSGETAGGKFPVEAVTIMSKICLE 378 (520)
T ss_dssp EEESHHHHSCSCHHHHHHHHHHHHHH
T ss_pred EEecccccCCcCHHHHHHHHHHHHHH
Confidence 9995 687888999887777777654
No 248
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=82.44 E-value=7.4 Score=42.08 Aligned_cols=148 Identities=9% Similarity=0.111 Sum_probs=75.7
Q ss_pred eEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEec----CCCC---h-hHHHHHHHHHHHhccccccCCCcc
Q 006969 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS---K-EDFEAVRTIAKEVGNAVDAESGYV 151 (623)
Q Consensus 80 v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGf----P~~s---~-~d~e~v~~i~~~~~~~~~~~~~l~ 151 (623)
+-|+-+|. |-..--| ++.++.++.++.+.+.|.|+|.+|. |++. + +|.+.+.-+.+.+.....+. ...
T Consensus 194 MGIlNvTP-DSFsDgg--~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~-~~~ 269 (442)
T 3mcm_A 194 MGIVNLSN-QSFSDGN--FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANL-IYK 269 (442)
T ss_dssp EEEEECSS-CC-CCCS--SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTC-SSC
T ss_pred EEEEeCCC-CCCCCCC--CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcccc-CCC
Confidence 34666665 3222222 6788999999999999999999996 4332 1 23333322222221100000 000
Q ss_pred ceEEeecccchhhHHHHHHHHhcCCCCE-EEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCC
Q 006969 152 PVICGLSRCNERDIKTAWEAVKYAKRPR-IHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGR 230 (623)
Q Consensus 152 ~~i~~~~r~~~~dI~~a~eal~~a~~~~-v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r 230 (623)
..|+ .--.+.+-+++|++.. +|++. |. .+|- ..+ .++.+.+++.|+. |+.....+..
T Consensus 270 vpIS-IDT~~~~VaeaAL~~~--aGa~i~IN---DVsg---------~~d------~~m~~v~a~~g~~-vVlMh~~G~P 327 (442)
T 3mcm_A 270 PLVS-IDTRKLEVMQKILAKH--HDIIWMIN---DVEC---------NNI------EQKAQLIAKYNKK-YVIIHNLGIT 327 (442)
T ss_dssp CEEE-EECCCHHHHHHHHHHH--GGGCCEEE---ECCC---------TTH------HHHHHHHHHHTCE-EEEECC----
T ss_pred CeEE-EeCCCHHHHHHHHhhC--CCCCEEEE---cCCC---------CCC------hHHHHHHHHhCCe-EEEECCCCCC
Confidence 1122 2223556677777632 36665 54 3332 011 2456667778875 4443322211
Q ss_pred C-------------CHHHHHHHHHHHHHcCC--cEEee
Q 006969 231 S-------------DRKFLYEILGEVIKVGA--TTLNI 253 (623)
Q Consensus 231 ~-------------d~e~l~~~~~~~~~aGa--~~I~l 253 (623)
. -.+|+.+.++.+.++|+ +.|.|
T Consensus 328 ~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~~~~Iil 365 (442)
T 3mcm_A 328 DRNQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNIYF 365 (442)
T ss_dssp ------------CTHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred ccccccCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEE
Confidence 1 14678888889999998 34444
No 249
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=82.36 E-value=7.1 Score=40.22 Aligned_cols=110 Identities=11% Similarity=0.079 Sum_probs=68.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCccc-----------ccCHHHH
Q 006969 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEF 265 (623)
Q Consensus 197 ~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG-----------~~~P~~v 265 (623)
.|.+|++..+....+-. ..... |..+.+.++ -+++.+.+.++.++++|+..|.|-|.++ ....+++
T Consensus 69 vt~~em~~~~~~i~r~~-~~~~P-viaD~d~Gy-g~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~ 145 (307)
T 3lye_A 69 AQLHDMRDNADMIANLD-PFGPP-LIADMDTGY-GGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEY 145 (307)
T ss_dssp SCHHHHHHHHHHHHTSS-TTSCC-EEEECTTCS-SSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHH
T ss_pred CCHHHHHHHHHhhhccC-CCCCc-EEEECCCCC-CCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHH
Confidence 47777776655443221 11243 778886654 4788899999999999999999999986 3344566
Q ss_pred HHHHHHHHHhCC--CCcceeEEEeecC----CcchHHHHHHHHHHhCCCEE
Q 006969 266 GKLIADIKANTP--GIENVVISTHCQN----DLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 266 ~~li~~l~~~~~--~~~~v~i~~H~HN----D~GlAvANslaAv~aGA~~V 310 (623)
.+.|+..++.-. +. +..|-.=+-. ++--++.-+.+..+||||.|
T Consensus 146 ~~rI~Aa~~A~~~~~~-d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~i 195 (307)
T 3lye_A 146 LVRIRAAVATKRRLRS-DFVLIARTDALQSLGYEECIERLRAARDEGADVG 195 (307)
T ss_dssp HHHHHHHHHHHHHTTC-CCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHhcCC-CeEEEEechhhhccCHHHHHHHHHHHHHCCCCEE
Confidence 666666654321 11 1333333322 22346666677788888876
No 250
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=82.34 E-value=15 Score=36.29 Aligned_cols=202 Identities=10% Similarity=0.055 Sum_probs=109.5
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcC
Q 006969 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 175 (623)
..|-.+-...+-+.+.+.|++.+-.........+.+.++.+... .++ + |... ......+...++.++..
T Consensus 14 ~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~---~vd---g----iIi~-~~~~~~~~~~~~~~~~~ 82 (313)
T 3m9w_A 14 LERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR---GVD---V----LVII-PYNGQVLSNVVKEAKQE 82 (313)
T ss_dssp SSTTHHHHHHHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHT---TCS---E----EEEE-CSSTTSCHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHc---CCC---E----EEEe-CCChhhhHHHHHHHHHC
Confidence 34667777888899999999877654432222334566665543 111 1 2111 12233344455566667
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHH-HcCCCeEEE-cccCCCCCCHHHHHHHHHHHHHcC----Cc
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFAR-SLGCDDVEF-SPEDAGRSDRKFLYEILGEVIKVG----AT 249 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak-~~G~~~V~f-~~eda~r~d~e~l~~~~~~~~~aG----a~ 249 (623)
++|.|.+-....+.......+.+ +.+....+++++. +.|...|.| ..........+.+.-+.+++.+.| ..
T Consensus 83 ~iPvV~~~~~~~~~~~~~~V~~D---~~~~g~~a~~~L~~~~G~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~~~~~~~~ 159 (313)
T 3m9w_A 83 GIKVLAYDRMINDADIDFYISFD---NEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 159 (313)
T ss_dssp TCEEEEESSCCTTSCCSEEEEEC---HHHHHHHHHHHHHHHCSSEEEEEEESCTTCHHHHHHHHHHHHHHHHHHHTTSEE
T ss_pred CCeEEEECCcCCCCCceEEEecC---HHHHHHHHHHHHHHhCCCCcEEEEECCCCCccHHHHHHHHHHHHHhhccCCCEE
Confidence 88887654332221000012222 3455667777777 788765554 221222223345555556666663 22
Q ss_pred EEeecCcccccCHHHHHHHHHHHHHhC-CCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCcc
Q 006969 250 TLNIPDTVGITMPTEFGKLIADIKANT-PGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (623)
Q Consensus 250 ~I~l~DTvG~~~P~~v~~li~~l~~~~-~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlG 318 (623)
.+.- .-.+-..+....+.+..+.+.. |.++ .+=|.||. +|++-..+.-++|-+ =|.+|.|++
T Consensus 160 ~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~----ai~~~~d~-~a~g~~~al~~~G~~-~di~vig~d 222 (313)
T 3m9w_A 160 VVGD-QWVDGWLPENALKIMENALTANNNKID----AVVASNDA-TAGGAIQALSAQGLS-GKVAISGQD 222 (313)
T ss_dssp EEEE-EECGGGCHHHHHHHHHHHHHHTTTCCC----EEEESSHH-HHHHHHHHHHTTTCT-TTSEECCCS
T ss_pred EEee-ccCCCcCHHHHHHHHHHHHHhCCCCee----EEEECCCc-hHHHHHHHHHHcCCC-CCcEEEecC
Confidence 2211 1134557788888887777666 5432 55577764 555555555677876 458888876
No 251
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=82.34 E-value=44 Score=33.69 Aligned_cols=195 Identities=12% Similarity=0.087 Sum_probs=117.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+....++ |+.+-
T Consensus 20 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la~ 92 (294)
T 3b4u_A 20 TVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGI-------APSRIVTGVLVDSIEDAADQSA 92 (294)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTC-------CGGGEEEEECCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCccHHHHHHHHH
Confidence 478888899999999999999887 3 465666665 45555555432 3457888888655444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhC-CCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHc
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLR-KTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKV 246 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~-~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~a 246 (623)
. ...+|++.+-+..|-. ++ .|.++.++-..+..+..-.-++..+-|+ |. .+...+++.+.++++ +.
T Consensus 93 ~-A~~~Gadavlv~~P~y-------~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~---~~ 161 (294)
T 3b4u_A 93 E-ALNAGARNILLAPPSY-------FKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKA---AF 161 (294)
T ss_dssp H-HHHTTCSEEEECCCCS-------SCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHH---HC
T ss_pred H-HHhcCCCEEEEcCCcC-------CCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHH---hC
Confidence 3 3557999887765532 23 4777776666555443210045545554 32 234567787777653 23
Q ss_pred CCc-EEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCccc
Q 006969 247 GAT-TLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNAS 325 (623)
Q Consensus 247 Ga~-~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~ 325 (623)
.. .+.+.||.|- ..++.++++... .+ .+ +-..+ ...+.++..|++.+ +.| .+|..
T Consensus 162 -pn~ivgiKds~gd--~~~~~~~~~~~~-~f------~v-~~G~d------~~~l~~l~~G~~G~---is~----~~n~~ 217 (294)
T 3b4u_A 162 -PGIVTGVKDSSGN--WSHTERLLKEHG-DL------AI-LIGDE------RDLARGVRLGGQGA---ISG----VANFL 217 (294)
T ss_dssp -TTTEEEEEECCCC--HHHHHHHHHHHT-TS------EE-EECCH------HHHHHHHHTTCCEE---EES----GGGTC
T ss_pred -CCcEEEEEECCCC--HHHHHHHHHhCC-Ce------EE-EEccH------HHHHHHHHCCCCEE---EeC----HHHhC
Confidence 56 8999999985 345666554432 22 12 22332 23566888998654 333 45777
Q ss_pred HHHHHHHH
Q 006969 326 LEEVVMAF 333 (623)
Q Consensus 326 lEevv~~L 333 (623)
.+.++...
T Consensus 218 P~~~~~l~ 225 (294)
T 3b4u_A 218 TQEVRAMA 225 (294)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76655433
No 252
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=82.27 E-value=12 Score=38.49 Aligned_cols=203 Identities=15% Similarity=0.113 Sum_probs=114.9
Q ss_pred HHHHHhHcCCCEEEEec---------CCCCh---hH-HHHHHHHHHHhccccccCCCccceEE----eecccchhhHHHH
Q 006969 106 IARQLAKLGVDIIEAGF---------PAASK---ED-FEAVRTIAKEVGNAVDAESGYVPVIC----GLSRCNERDIKTA 168 (623)
Q Consensus 106 Ia~~L~~~Gvd~IEvGf---------P~~s~---~d-~e~v~~i~~~~~~~~~~~~~l~~~i~----~~~r~~~~dI~~a 168 (623)
-++.++++|||.|=+|. |...+ +| ...++.+++.... |.++ |++ ....+.++
T Consensus 41 sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~---------pviaD~d~Gyg--~~~~v~~~ 109 (305)
T 3ih1_A 41 AALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRATDL---------PVLVDIDTGFG--GVLNVART 109 (305)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHHCC---------CEEEECTTCSS--SHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhcCC---------CEEEECCCCCC--CHHHHHHH
Confidence 36777889999998863 44332 22 3556666654321 3222 233 34556666
Q ss_pred HHHHhcCCCCEEEEEecCCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC-CCCHHHHHHHHHHHH
Q 006969 169 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVI 244 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~Sd~---h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~-r~d~e~l~~~~~~~~ 244 (623)
.+.+..+|+..|+|-..+++- |+..+-=.+.+|..++++.+++. |...+...=.|+. ....+.+++=+++..
T Consensus 110 v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A----~~~~~I~ARtda~~~~g~~~ai~Ra~ay~ 185 (305)
T 3ih1_A 110 AVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV----APSLYIVARTDARGVEGLDEAIERANAYV 185 (305)
T ss_dssp HHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH----CTTSEEEEEECCHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc----CCCeEEEEeeccccccCHHHHHHHHHHHH
Confidence 666777899999998876531 21111013566666655544443 5542222111211 123677888888899
Q ss_pred HcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcch-HHHHHHHHHHhCCCEEEeccCCccCccCc
Q 006969 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAGACAGARQVEVTINGIGERAGN 323 (623)
Q Consensus 245 ~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl-AvANslaAv~aGA~~Vd~Tv~GlGERaGN 323 (623)
++|||.|.+. |.-.++++.++.+. ++ +|+-+-.-. .|. ..-+.-.--+.|+++|-..... =|+-+
T Consensus 186 eAGAD~i~~e---~~~~~~~~~~i~~~----~~----~P~~~n~~~-~g~tp~~~~~eL~~lGv~~v~~~~~~--~raa~ 251 (305)
T 3ih1_A 186 KAGADAIFPE---ALQSEEEFRLFNSK----VN----APLLANMTE-FGKTPYYSAEEFANMGFQMVIYPVTS--LRVAA 251 (305)
T ss_dssp HHTCSEEEET---TCCSHHHHHHHHHH----SC----SCBEEECCT-TSSSCCCCHHHHHHTTCSEEEECSHH--HHHHH
T ss_pred HcCCCEEEEc---CCCCHHHHHHHHHH----cC----CCEEEeecC-CCCCCCCCHHHHHHcCCCEEEEchHH--HHHHH
Confidence 9999999985 23455665555554 43 233221110 111 0112345556799998544333 47788
Q ss_pred ccHHHHHHHHHhcc
Q 006969 324 ASLEEVVMAFKCRG 337 (623)
Q Consensus 324 a~lEevv~~L~~~~ 337 (623)
..+++++..|...|
T Consensus 252 ~a~~~~~~~i~~~g 265 (305)
T 3ih1_A 252 KAYENVFTLIKETG 265 (305)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcC
Confidence 88888888887755
No 253
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=82.21 E-value=11 Score=38.17 Aligned_cols=98 Identities=8% Similarity=0.049 Sum_probs=64.5
Q ss_pred hcCCCCEEEEEecCCHHHHHHHh------CCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCC-CCHHHHHHHHHHHHH
Q 006969 173 KYAKRPRIHTFIATSGIHMEHKL------RKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGR-SDRKFLYEILGEVIK 245 (623)
Q Consensus 173 ~~a~~~~v~i~~~~Sd~h~~~~l------~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r-~d~e~l~~~~~~~~~ 245 (623)
..+|++.|- +..|- -+ ..+ ..|.+|++..++..++-++ ...|..+.+.++. .+++..++.+.++.+
T Consensus 34 e~aG~d~il--vGdSl-~~-~~lG~~dt~~vTldemi~h~~aV~r~~~---~~~vvaD~pfgsy~~s~~~a~~na~rl~k 106 (275)
T 1o66_A 34 DDAGVEMLL--VGDSL-GM-AVQGRKSTLPVSLRDMCYHTECVARGAK---NAMIVSDLPFGAYQQSKEQAFAAAAELMA 106 (275)
T ss_dssp HHTTCCEEE--ECTTH-HH-HTTCCSSSTTCCHHHHHHHHHHHHHHCS---SSEEEEECCTTSSSSCHHHHHHHHHHHHH
T ss_pred HHcCCCEEE--ECHHH-HH-HHcCCCCCCCCCHHHHHHHHHHHHhhCC---CCeEEEECCCCCccCCHHHHHHHHHHHHH
Confidence 346899773 33332 22 233 4578888776665544432 2235566655444 689999999999999
Q ss_pred cCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEee
Q 006969 246 VGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHC 288 (623)
Q Consensus 246 aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~ 288 (623)
+||+.|.|-|. .++.+.|+.+.+. .+|+--|.
T Consensus 107 aGa~aVklEdg------~e~~~~I~al~~a-----gIpV~gHi 138 (275)
T 1o66_A 107 AGAHMVKLEGG------VWMAETTEFLQMR-----GIPVCAHI 138 (275)
T ss_dssp TTCSEEEEECS------GGGHHHHHHHHHT-----TCCEEEEE
T ss_pred cCCcEEEECCc------HHHHHHHHHHHHc-----CCCeEeee
Confidence 99999999997 3677888888764 24455554
No 254
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=82.17 E-value=32 Score=37.04 Aligned_cols=203 Identities=15% Similarity=0.122 Sum_probs=116.7
Q ss_pred hHHHHHHHHhcCCCCEEEEEecCC-HH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE---cccC---------
Q 006969 164 DIKTAWEAVKYAKRPRIHTFIATS-GI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF---SPED--------- 227 (623)
Q Consensus 164 dI~~a~eal~~a~~~~v~i~~~~S-d~---h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f---~~ed--------- 227 (623)
.+.+.++.+..+|+..|||-..+. +- |+.-+-=.+.+|.++++..+...+...|.+.|.. +..-
T Consensus 161 nv~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s~~d 240 (433)
T 3eol_A 161 DAFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTSDID 240 (433)
T ss_dssp HHHHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCS
T ss_pred HHHHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCccccccccCcc
Confidence 455556666667999999988775 32 3321112478999999988877777667653322 2210
Q ss_pred ----------CC---------CCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEee
Q 006969 228 ----------AG---------RSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHC 288 (623)
Q Consensus 228 ----------a~---------r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~ 288 (623)
+. +...+..++=+++..+ |||.|.+ .+ |.-.++++.++.+.++..+|. ..+..-+
T Consensus 241 ~rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~-e~-~~~~~eei~~f~~~v~~~~P~---~~L~~~~ 314 (433)
T 3eol_A 241 ERDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWM-ET-SKPDLAQARRFAEAVHKAHPG---KLLAYNC 314 (433)
T ss_dssp TTTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEE-CC-SSCCHHHHHHHHHHHHHHSTT---CCEEEEC
T ss_pred cccccceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEE-eC-CCCCHHHHHHHHHHhcccCCC---cccccCC
Confidence 11 1346666666666666 9999987 11 456899999999999988874 2344322
Q ss_pred cCCcch----H---HHH-HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHH
Q 006969 289 QNDLGL----S---TAN-TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMV 360 (623)
Q Consensus 289 HND~Gl----A---vAN-slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v 360 (623)
--.+.. . +.+ .-.--+.|+.++-.++.+ =|+-|.++.+++..+...| ....++ |.+ -.+-
T Consensus 315 sPsfnw~~~~~~~~~~~f~~eLa~lGv~~v~~~~a~--~raa~~A~~~~a~~i~~~G------~~ayve---~Q~-~e~~ 382 (433)
T 3eol_A 315 SPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAG--FHQLNYGMFELARGYKDRQ------MAAYSE---LQQ-AEFA 382 (433)
T ss_dssp CSSSCHHHHSCHHHHHHHHHHHHHHTEEEEEETTHH--HHHHHHHHHHHHHHHHHHT------HHHHHH---HHH-HHHH
T ss_pred CCCCcccccCChhHHhHHHHHHHHcCCeEEEeCcHH--HHHHHHHHHHHHHHHHHcC------CHHHHH---HHH-Hhhh
Confidence 212221 0 111 123335798888655554 4788888999888887643 222121 111 1223
Q ss_pred HHHhCCCCCCCCcccCcchhhccc
Q 006969 361 EEYTGLHVQPHKAIVGANAFAHES 384 (623)
Q Consensus 361 ~~~~g~~i~~~~pivG~~aF~h~s 384 (623)
.+..|+..-.|+-.+|.+-|-.-+
T Consensus 383 ~~~~g~~~~~hq~~~g~~y~d~~~ 406 (433)
T 3eol_A 383 AEADGYTATKHQREVGTGYFDAVS 406 (433)
T ss_dssp HGGGTCCCC--------CHHHHHH
T ss_pred hhccCceeeecccccccchHHHHH
Confidence 457899888899999998875544
No 255
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=82.09 E-value=13 Score=38.07 Aligned_cols=108 Identities=16% Similarity=0.119 Sum_probs=66.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcc--------c----ccCH-H
Q 006969 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV--------G----ITMP-T 263 (623)
Q Consensus 197 ~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTv--------G----~~~P-~ 263 (623)
.|.+|++..+...++- .... |..+.+.++ -+++.+.+.++.++++||..|.|-|.+ | .+.| +
T Consensus 62 vt~~em~~~~~~I~~~---~~~P-viaD~d~Gy-g~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~ 136 (295)
T 1s2w_A 62 ASWTQVVEVLEFMSDA---SDVP-ILLDADTGY-GNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIE 136 (295)
T ss_dssp --CHHHHHHHHHHHHT---CSSC-EEEECCSSC-SSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHH
T ss_pred CCHHHHHHHHHHHHhc---CCCC-EEecCCCCC-CCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHH
Confidence 4666666655544432 3344 788886664 467889999999999999999999997 3 2344 4
Q ss_pred HHHHHHHHHHHhCCCCcceeEEEeecCC-----cchHHHHHHHHHHhCCCEE
Q 006969 264 EFGKLIADIKANTPGIENVVISTHCQND-----LGLSTANTIAGACAGARQV 310 (623)
Q Consensus 264 ~v~~li~~l~~~~~~~~~v~i~~H~HND-----~GlAvANslaAv~aGA~~V 310 (623)
++.+.|+.+++.-.+. +..|-.-+-.. +--++.-+.+..+|||+.|
T Consensus 137 e~~~rI~Aa~~a~~~~-~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i 187 (295)
T 1s2w_A 137 EFALKIKACKDSQTDP-DFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAI 187 (295)
T ss_dssp HHHHHHHHHHHHCSST-TCEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHhcccC-CcEEEEeehHHhccccHHHHHHHHHHHHHcCCCEE
Confidence 5667777777653221 23333333222 1235556667777777765
No 256
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=82.08 E-value=43 Score=33.37 Aligned_cols=166 Identities=16% Similarity=0.171 Sum_probs=91.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
..+.+.-++.++.+.+.|-|+|.+|.......+.|.++++...+... . + +| |+.= -.+.+-++.|+++. .|
T Consensus 21 ~~~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~-~---~-~p-isID-T~~~~v~~aAl~a~--~G 91 (262)
T 1f6y_A 21 ERDPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEV-S---N-LT-LCLD-STNIKAIEAGLKKC--KN 91 (262)
T ss_dssp HTCHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTT-C---C-SE-EEEE-CSCHHHHHHHHHHC--SS
T ss_pred cCCHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHh-C---C-Ce-EEEe-CCCHHHHHHHHhhC--CC
Confidence 36889999999999999999999996322222334444444433221 0 1 12 2222 23556667777653 25
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccC--CCCC----CHHHHHHHHHHHHHcCCc-
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRS----DRKFLYEILGEVIKVGAT- 249 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ed--a~r~----d~e~l~~~~~~~~~aGa~- 249 (623)
.+.| .++|- . + +...++...++++|+. |...+.+ +... .++++.+.++.+.++|..
T Consensus 92 a~iI---Ndvs~--------~--~---d~~~~~~~~~a~~~~~-vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~ 154 (262)
T 1f6y_A 92 RAMI---NSTNA--------E--R---EKVEKLFPLAVEHGAA-LIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPM 154 (262)
T ss_dssp CEEE---EEECS--------C--H---HHHHHHHHHHHHTTCE-EEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCG
T ss_pred CCEE---EECCC--------C--c---ccHHHHHHHHHHhCCc-EEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCc
Confidence 5444 44442 1 1 2233556677888885 5554432 2222 247788888889999985
Q ss_pred -EEee-c--CcccccC--HHHHHHHHHHHHHhC-CCCcceeEEEeecCC
Q 006969 250 -TLNI-P--DTVGITM--PTEFGKLIADIKANT-PGIENVVISTHCQND 291 (623)
Q Consensus 250 -~I~l-~--DTvG~~~--P~~v~~li~~l~~~~-~~~~~v~i~~H~HND 291 (623)
.|.| | .+.|... ..++-+.++.+++.+ |+ .|+.+=.+|-
T Consensus 155 ~~IilDPg~g~~g~~~~~~~~~l~~l~~l~~~~~pg---~pvl~G~Srk 200 (262)
T 1f6y_A 155 EDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPA---PKTVLGLSNV 200 (262)
T ss_dssp GGEEEECCCCCTTTCTTHHHHHHHHHHHHHTCCSSC---CEEEEEGGGG
T ss_pred ccEEEeCCCCcCCCChHHHHHHHHHHHHHHHHhCCC---CCEEEeecCC
Confidence 3443 1 1123322 235555666677655 54 4565545553
No 257
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=81.93 E-value=67 Score=35.43 Aligned_cols=166 Identities=16% Similarity=0.223 Sum_probs=105.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
.+|.+++.++.+.-.+.|||+|=+-|.. +++|...+|.+.+..+........-...|+-.. +.+.++.--+.+..
T Consensus 212 ~lTekD~~D~l~fa~~~~vD~ialSFVr-~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE--~~~av~NldeIi~~-- 286 (526)
T 4drs_A 212 IIGDKDRHDIVDFALKYNLDFIALSFVQ-NGADVQLCRQIISENTQYSNGIPSSIKIISKIE--NLEGVINFDSICSE-- 286 (526)
T ss_dssp SSCHHHHHHHHHTTTTTTCSEEEETTCC-SHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEEC--SHHHHHTHHHHHHH--
T ss_pred cccchhHHHHHHHHHHhccCeeeecccC-chhhHHHHHHHHHhhCcccccccccceeeeehh--ccHHHHHHHHHHhh--
Confidence 4677888888888889999999998874 678888888877643211000000012232222 33333321111221
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------cccCCCCCCHHHHHHHHHHHHHcCCcE
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGATT 250 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~~eda~r~d~e~l~~~~~~~~~aGa~~ 250 (623)
.+. +.++=-|+=++ ...|++-..-++.++.|+..|.. |.+ +.....+-....+.+++.++.+ |+|.
T Consensus 287 sDg--IMVARGDLgvE----ip~e~vp~~QK~II~~c~~~gKP-VI~ATQmLeSMi~np~PTRAEvsDVAnAV~D-GaDa 358 (526)
T 4drs_A 287 SDG--IMVARGDLGME----IPPEKIFVAQKCMISKCNVAGKP-VVTATQMLESMIKSNRPTRAEMTDVANAVLD-GSDC 358 (526)
T ss_dssp SSE--EEEECTTHHHH----SCGGGHHHHHHHHHHHHHHHTCC-EEEESCTTGGGGSSSSCCHHHHHHHHHHHHH-TCSE
T ss_pred ccE--EEEECCccccc----CCHHHHHHHHHHHHHHHHHcCCe-EEEhhhhhHHHhhCCCCCCchHHHHHHHHHh-CCce
Confidence 233 44555554443 35566666667899999999986 655 2224556677888888888765 9999
Q ss_pred Eeec-CcccccCHHHHHHHHHHHHHh
Q 006969 251 LNIP-DTVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 251 I~l~-DTvG~~~P~~v~~li~~l~~~ 275 (623)
|.|. -|.=.-.|.+.-+.+..+.+.
T Consensus 359 vMLSgETA~G~yPveaV~~m~~I~~~ 384 (526)
T 4drs_A 359 VMLSGETANGAFPFDAVNVMSRVCAQ 384 (526)
T ss_dssp EEESHHHHSCSCHHHHHHHHHHHHHH
T ss_pred EEEcchhhcccCHHHHHHHHHHHHHH
Confidence 9997 677778998887777766554
No 258
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=81.82 E-value=11 Score=39.69 Aligned_cols=80 Identities=8% Similarity=0.025 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHcCCcEEee-------------------cCcccccCH---HHHHHHHHHHHHhCCCCcceeEEE-----
Q 006969 234 KFLYEILGEVIKVGATTLNI-------------------PDTVGITMP---TEFGKLIADIKANTPGIENVVIST----- 286 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l-------------------~DTvG~~~P---~~v~~li~~l~~~~~~~~~v~i~~----- 286 (623)
+.+.+.++.+.++|.|.|-| .|-.|.... ..+.++|+.+|+.++. + +|++
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~--~-~v~vrls~~ 237 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSA--D-RIGIRVSPI 237 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCG--G-GEEEEECCS
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCC--C-cEEEEEccc
Confidence 45567777888999998887 144555433 3467789999999863 2 4555
Q ss_pred eecCCc---chHH----HHHHHHHHhCCCEEEeccCC
Q 006969 287 HCQNDL---GLST----ANTIAGACAGARQVEVTING 316 (623)
Q Consensus 287 H~HND~---GlAv----ANslaAv~aGA~~Vd~Tv~G 316 (623)
..+++. +... .-+...-++|++.|+.+..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~ 274 (364)
T 1vyr_A 238 GTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETD 274 (364)
T ss_dssp SCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCB
T ss_pred cccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCc
Confidence 223321 2233 23445567899999987643
No 259
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=81.39 E-value=10 Score=36.77 Aligned_cols=106 Identities=10% Similarity=0.040 Sum_probs=72.3
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHH
Q 006969 163 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGE 242 (623)
Q Consensus 163 ~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~ 242 (623)
.+++.+++.++.+|.+.|.++.. |. ....+.+ .+.+..+.+++.|++.+.+++.. ....+++.+.++.
T Consensus 30 ~~~~~~l~~~~~~G~~~vEl~~~----~~--~~~~~~~----~~~~~~~~l~~~gl~i~~~~~~~--~~~~~~~~~~i~~ 97 (257)
T 3lmz_A 30 FDLDTTLKTLERLDIHYLCIKDF----HL--PLNSTDE----QIRAFHDKCAAHKVTGYAVGPIY--MKSEEEIDRAFDY 97 (257)
T ss_dssp SCHHHHHHHHHHTTCCEEEECTT----TS--CTTCCHH----HHHHHHHHHHHTTCEEEEEEEEE--ECSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCEEEEecc----cC--CCCCCHH----HHHHHHHHHHHcCCeEEEEeccc--cCCHHHHHHHHHH
Confidence 47788888888899999998754 11 1233432 34566677888998643343321 1568899999999
Q ss_pred HHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecC
Q 006969 243 VIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQN 290 (623)
Q Consensus 243 ~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HN 290 (623)
+.+.|+..|.+. .| .+.+.++.....+. ++.|.+|.|+
T Consensus 98 A~~lGa~~v~~~--p~---~~~l~~l~~~a~~~-----gv~l~lEn~~ 135 (257)
T 3lmz_A 98 AKRVGVKLIVGV--PN---YELLPYVDKKVKEY-----DFHYAIHLHG 135 (257)
T ss_dssp HHHHTCSEEEEE--EC---GGGHHHHHHHHHHH-----TCEEEEECCC
T ss_pred HHHhCCCEEEec--CC---HHHHHHHHHHHHHc-----CCEEEEecCC
Confidence 999999998874 12 35566666666543 3679999996
No 260
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=81.36 E-value=5.5 Score=40.28 Aligned_cols=148 Identities=14% Similarity=0.134 Sum_probs=74.5
Q ss_pred HHHHHHHHhcCCCCEEEEEecCCH------------HHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccC-CCCC
Q 006969 165 IKTAWEAVKYAKRPRIHTFIATSG------------IHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED-AGRS 231 (623)
Q Consensus 165 I~~a~eal~~a~~~~v~i~~~~Sd------------~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ed-a~r~ 231 (623)
++++++.....|.+.|.+...... ...+ ...+...+.+.++.++|++.|+. +.+-+.. ..-.
T Consensus 113 ~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~ 187 (340)
T 2zds_A 113 IKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIE----RGYQDFADRWNPILDVFDAEGVR-FAHEVHPSEIAY 187 (340)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHH----HHHHHHHHHHHHHHHHHHHHTCE-EEEECCTTSSCC
T ss_pred HHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchH----HHHHHHHHHHHHHHHHHHHcCCE-EEEEcCCCcccC
Confidence 344555555668888877543210 0011 11234556667778889999974 5553322 1234
Q ss_pred CHHHHHHHHHHHHHcC-CcEEee-cCcccccCH-HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCC-
Q 006969 232 DRKFLYEILGEVIKVG-ATTLNI-PDTVGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGA- 307 (623)
Q Consensus 232 d~e~l~~~~~~~~~aG-a~~I~l-~DTvG~~~P-~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA- 307 (623)
+++.+.++++.+ + ...+.+ -||.=...- ....+.++.+.. -...+|.+|..+--. ...|.
T Consensus 188 ~~~~~~~ll~~v---~~~~~vg~~~D~~H~~~~g~d~~~~l~~~~~-------~i~~vHl~D~~~~~~------~~~g~~ 251 (340)
T 2zds_A 188 DYWTTHRALEAV---GHRPAFGLNFDPSHFVWQDLDPVGFLWDFRD-------RIYHVDCKEARKRLD------GRNGRL 251 (340)
T ss_dssp SHHHHHHHHHHT---TTCTTEEEEECCHHHHHTTCCHHHHHHHTGG-------GEEEEEECEEEECCC------SSSCTT
T ss_pred CHHHHHHHHHhc---CCCCCeeEEEchhhHHHhCCCHHHHHHHHHh-------hEEEEEeccCccccc------cccccc
Confidence 667776666654 4 222333 366322111 112233333322 246889988642100 00010
Q ss_pred ----------CEEEeccCCccCccCcccHHHHHHHHHhcc
Q 006969 308 ----------RQVEVTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 308 ----------~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
+.-.-. -+|+ |..+..+++..|+..+
T Consensus 252 ~~~~~~~~~~r~~~~~--~~G~--G~id~~~i~~~L~~~g 287 (340)
T 2zds_A 252 GSHLPWGDPRRGWDFV--SAGH--GDVPWEDVFRMLRSID 287 (340)
T ss_dssp CTTCCTTCTTSSEEEE--CTTS--SCCCHHHHHHHHHHTT
T ss_pred cccCCcccccccceec--CCCC--CccCHHHHHHHHHhcC
Confidence 100111 2343 8899999999999765
No 261
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=81.24 E-value=9.4 Score=38.91 Aligned_cols=150 Identities=14% Similarity=0.065 Sum_probs=86.0
Q ss_pred HHHHHhHcCCCEEEEec----------CCCChhH----HHHHHHHHHHhccccccCCCccceEEe----ecccchhhHHH
Q 006969 106 IARQLAKLGVDIIEAGF----------PAASKED----FEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKT 167 (623)
Q Consensus 106 Ia~~L~~~Gvd~IEvGf----------P~~s~~d----~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~ 167 (623)
-++.++++||+.|=+|. |...+-. .+.++.|++... .|.++. |+ ....+-+
T Consensus 33 sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~---------~PviaD~d~Gyg--~~~~~~~ 101 (287)
T 3b8i_A 33 SARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVAR---------LPVIADADHGYG--NALNVMR 101 (287)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCS---------SCEEEECTTCSS--SHHHHHH
T ss_pred HHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCC---------CCEEEECCCCCC--CHHHHHH
Confidence 36777889999998862 3322221 345555554321 133332 33 4455555
Q ss_pred HHHHHhcCCCCEEEEEecCCH---HHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHH
Q 006969 168 AWEAVKYAKRPRIHTFIATSG---IHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVI 244 (623)
Q Consensus 168 a~eal~~a~~~~v~i~~~~Sd---~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~ 244 (623)
....+..+|+..|+|-....+ -|...+ =.+.+|..+.++.+++....-|+ .|.--. |+.....+.+++=+++..
T Consensus 102 ~v~~l~~aGa~gv~iED~~~pKrcgh~~gk-l~~~~e~~~~I~aa~~a~~~~~~-~i~aRt-daa~~gl~~ai~Ra~ay~ 178 (287)
T 3b8i_A 102 TVVELERAGIAALTIEDTLLPAQFGRKSTD-LICVEEGVGKIRAALEARVDPAL-TIIART-NAELIDVDAVIQRTLAYQ 178 (287)
T ss_dssp HHHHHHHHTCSEEEEECBCCSCCTTTCTTC-BCCHHHHHHHHHHHHHHCCSTTS-EEEEEE-ETTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEEcCCCCccccCCCCCC-ccCHHHHHHHHHHHHHcCCCCCc-EEEEec-hhhhcCHHHHHHHHHHHH
Confidence 554455579999999877653 133223 24666766665555544332222 122211 333345688888899999
Q ss_pred HcCCcEEeecCcccccCHHHHHHHHHHH
Q 006969 245 KVGATTLNIPDTVGITMPTEFGKLIADI 272 (623)
Q Consensus 245 ~aGa~~I~l~DTvG~~~P~~v~~li~~l 272 (623)
++|||.|.+. |.-.++++.++.+.+
T Consensus 179 eAGAd~i~~e---~~~~~~~~~~i~~~~ 203 (287)
T 3b8i_A 179 EAGADGICLV---GVRDFAHLEAIAEHL 203 (287)
T ss_dssp HTTCSEEEEE---CCCSHHHHHHHHTTC
T ss_pred HcCCCEEEec---CCCCHHHHHHHHHhC
Confidence 9999999997 444456665555443
No 262
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=80.97 E-value=52 Score=33.56 Aligned_cols=77 Identities=13% Similarity=0.113 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCccc----------------ccCH---HHHHHHHHHHHHhCCCCcceeEEEeecCC
Q 006969 231 SDRKFLYEILGEVIKVGATTLNIPDTVG----------------ITMP---TEFGKLIADIKANTPGIENVVISTHCQND 291 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~aGa~~I~l~DTvG----------------~~~P---~~v~~li~~l~~~~~~~~~v~i~~H~HND 291 (623)
.+.+.+.++++.+.++|+|.|.+..|.. +.-| ...-++++.+++.+++ +++|..=.-=.
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~--~ipVi~~GGI~ 299 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNG--RLPIIGVGGID 299 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTT--SSCEEEESSCC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCC--CCCEEEECCCC
Confidence 4567788999999999999999886631 1111 1123667777776642 24444322222
Q ss_pred cchHHHHHHHHHHhCCCEEEe
Q 006969 292 LGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 292 ~GlAvANslaAv~aGA~~Vd~ 312 (623)
. -.-+..++.+||+.|..
T Consensus 300 ~---~~da~~~l~~GAd~V~i 317 (336)
T 1f76_A 300 S---VIAAREKIAAGASLVQI 317 (336)
T ss_dssp S---HHHHHHHHHHTCSEEEE
T ss_pred C---HHHHHHHHHCCCCEEEe
Confidence 2 23455666778888743
No 263
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=80.72 E-value=21 Score=42.47 Aligned_cols=140 Identities=16% Similarity=0.146 Sum_probs=79.1
Q ss_pred cchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCeEE--EcccCCCCCCHHHH
Q 006969 160 CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVE--FSPEDAGRSDRKFL 236 (623)
Q Consensus 160 ~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~~V~--f~~eda~r~d~e~l 236 (623)
.+.++...+.+.+..+|++.|.+-++..-......+|.+..+..+.+.+.++.+++. ++. |. +.+ +. +.+
T Consensus 645 ~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~P-v~vK~~~-~~-----~~~ 717 (1025)
T 1gte_A 645 YNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP-FFAKLTP-NV-----TDI 717 (1025)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSC-EEEEECS-CS-----SCH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCc-eEEEeCC-Ch-----HHH
Confidence 356777777777777899988776542211112233333323345555666666655 444 33 344 22 236
Q ss_pred HHHHHHHHHcCCcEEeecCcc-------------------------cccCHHH---HHHHHHHHHHhCCCCcceeEEEee
Q 006969 237 YEILGEVIKVGATTLNIPDTV-------------------------GITMPTE---FGKLIADIKANTPGIENVVISTHC 288 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~DTv-------------------------G~~~P~~---v~~li~~l~~~~~~~~~v~i~~H~ 288 (623)
.++++.+.++|++.|.+..|. |+.-|.. ..+++..+++.+++ ++|..=.
T Consensus 718 ~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~---ipvi~~G 794 (1025)
T 1gte_A 718 VSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPG---FPILATG 794 (1025)
T ss_dssp HHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTT---CCEEEES
T ss_pred HHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCC---CCEEEec
Confidence 788889999999999984322 2222221 13678888887753 4555433
Q ss_pred cCCcchHHHHHHHHHHhCCCEEEe
Q 006969 289 QNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 289 HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
-=..+ ..+..++.+||+.|..
T Consensus 795 GI~s~---~da~~~l~~Ga~~v~v 815 (1025)
T 1gte_A 795 GIDSA---ESGLQFLHSGASVLQV 815 (1025)
T ss_dssp SCCSH---HHHHHHHHTTCSEEEE
T ss_pred CcCCH---HHHHHHHHcCCCEEEE
Confidence 33333 3445566689988755
No 264
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=80.69 E-value=13 Score=35.87 Aligned_cols=72 Identities=13% Similarity=0.193 Sum_probs=49.9
Q ss_pred HHHHHHHHcCCcEEeecCcccccCH--HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccC
Q 006969 238 EILGEVIKVGATTLNIPDTVGITMP--TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 315 (623)
Q Consensus 238 ~~~~~~~~aGa~~I~l~DTvG~~~P--~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~ 315 (623)
+.++.+.++||+.|.+-=.. ...| ..+.++++.+++.+|+ .++.+-+|+ ...+..+.++|++.|..++.
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~-~~~~~~~~~~~~i~~i~~~~~~---~~v~~~~~t-----~~ea~~a~~~Gad~i~~~v~ 162 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCTK-RDRHDGLDIASFIRQVKEKYPN---QLLMADIST-----FDEGLVAHQAGIDFVGTTLS 162 (234)
T ss_dssp HHHHHHHTTTCSEEEEECCS-SCCTTCCCHHHHHHHHHHHCTT---CEEEEECSS-----HHHHHHHHHTTCSEEECTTT
T ss_pred HHHHHHHHcCCCEEEEcccc-cCCCCCccHHHHHHHHHHhCCC---CeEEEeCCC-----HHHHHHHHHcCCCEEeeecc
Confidence 34566788999998763221 1123 2467899999998864 456666665 33478899999999976777
Q ss_pred Ccc
Q 006969 316 GIG 318 (623)
Q Consensus 316 GlG 318 (623)
|+.
T Consensus 163 g~~ 165 (234)
T 1yxy_A 163 GYT 165 (234)
T ss_dssp TSS
T ss_pred ccC
Confidence 763
No 265
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=80.65 E-value=50 Score=36.62 Aligned_cols=158 Identities=19% Similarity=0.218 Sum_probs=100.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
.+|..++..| +...+.|+|+|=+-|.. +++|...++.+.+..+.. ..+.+.| . +.+.++..-+.+..
T Consensus 239 alTekD~~dl-~f~~~~~vD~ia~SfVr-~a~Dv~~~r~~L~~~g~~----i~IIAKI---E--~~eav~nldeIl~~-- 305 (550)
T 3gr4_A 239 AVSEKDIQDL-KFGVEQDVDMVFASFIR-KASDVHEVRKVLGEKGKN----IKIISKI---E--NHEGVRRFDEILEA-- 305 (550)
T ss_dssp SSCHHHHHHH-HHHHHTTCSEEEETTCC-SHHHHHHHHHHHTTTTTT----SEEEEEE---C--SHHHHHTHHHHHHH--
T ss_pred CCCHHHHHHH-HHHHHcCCCEEEecCCC-CHHHHHHHHHHHHhcCCC----ceEEEEe---C--CHHHHHHHHHHHHh--
Confidence 3567887777 46678899999998874 677777777765432211 0112222 1 33444332122221
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------cccCCCCCCHHHHHHHHHHHHHcCCcE
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGATT 250 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~~eda~r~d~e~l~~~~~~~~~aGa~~ 250 (623)
.+. ++++-.|+=++ +..+++...-+.+++.|+.+|+. |.+ |.....+-....+.+++.++.+ |+|.
T Consensus 306 sDg--ImVaRGDLgve----i~~e~vp~~Qk~iI~~c~~agkp-Vi~ATQMLeSMi~~p~PTRAEvsDVanAvld-G~Da 377 (550)
T 3gr4_A 306 SDG--IMVARGDLGIE----IPAEKVFLAQKMMIGRCNRAGKP-VICATQMLESMIKKPRPTRAEGSDVANAVLD-GADC 377 (550)
T ss_dssp SSE--EEEEHHHHHHH----SCGGGHHHHHHHHHHHHHHHTCC-EEEESSTTGGGGTCSSCCHHHHHHHHHHHHH-TCSE
T ss_pred CCE--EEEccchhccc----CCHHHHHHHHHHHHHHHHHhCCC-EEEEehhhHHhhcCCCccHHHHHHHHHHHHc-CCcE
Confidence 343 45565565443 23466777778899999999986 554 2334556677888888888765 9999
Q ss_pred Eeec-CcccccCHHHHHHHHHHHHHh
Q 006969 251 LNIP-DTVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 251 I~l~-DTvG~~~P~~v~~li~~l~~~ 275 (623)
|.|. .|.-...|.+.-+.+..+.+.
T Consensus 378 vMLSgETA~G~yPveaV~~M~~I~~~ 403 (550)
T 3gr4_A 378 IMLSGETAKGDYPLEAVRMQHLIARE 403 (550)
T ss_dssp EEESHHHHTCSCHHHHHHHHHHHHHH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHHH
Confidence 9995 677788998877777666543
No 266
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=80.43 E-value=34 Score=34.97 Aligned_cols=195 Identities=15% Similarity=0.143 Sum_probs=113.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEe-----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAG-----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWE 170 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvG-----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e 170 (623)
.+..+.-.++++.|.+.||+-|=+. ++.-+.+|. +.++...+... +.+|.|.+.+....+-|+.+-.
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~-------grvpViaGvg~~t~~ai~la~~ 101 (316)
T 3e96_A 29 SIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVH-------GRALVVAGIGYATSTAIELGNA 101 (316)
T ss_dssp CBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEEECSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC-------CCCcEEEEeCcCHHHHHHHHHH
Confidence 4788888999999999999988763 455566665 55565566543 3357888877533333444422
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcE
Q 006969 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATT 250 (623)
Q Consensus 171 al~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~ 250 (623)
...+|++.+-+..|-. .+.|.+++++-..+..+.. ++..+-|+. +...+++.+.+++ + -...
T Consensus 102 -A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a~---~lPiilYn~--g~~l~~~~~~~La----~-~pnI 163 (316)
T 3e96_A 102 -AKAAGADAVMIHMPIH-------PYVTAGGVYAYFRDIIEAL---DFPSLVYFK--DPEISDRVLVDLA----P-LQNL 163 (316)
T ss_dssp -HHHHTCSEEEECCCCC-------SCCCHHHHHHHHHHHHHHH---TSCEEEEEC--CTTSCTHHHHHHT----T-CTTE
T ss_pred -HHhcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHhC---CCCEEEEeC--CCCCCHHHHHHHH----c-CCCE
Confidence 3446899887665542 2457777777666555544 455455653 3455666555543 3 3479
Q ss_pred EeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHHHHH
Q 006969 251 LNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVV 330 (623)
Q Consensus 251 I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv 330 (623)
+.+.||.|- ..++.+++ +..++. +...-+-..++. .....+..|++. .+.| .+|.-.+.++
T Consensus 164 vgiKdssgd--~~~~~~~~----~~~~~~-~f~~v~~G~d~~-----~~~~~l~~G~~G---~is~----~an~~P~~~~ 224 (316)
T 3e96_A 164 VGVKYAIND--LPRFAKVV----RSIPEE-HQIAWICGTAEK-----WAPFFWHAGAKG---FTSG----LVNLLPQKAV 224 (316)
T ss_dssp EEEEECCCC--HHHHHHHH----TTSCGG-GCCEEEETTCTT-----THHHHHHHTCCE---EEES----GGGTCHHHHH
T ss_pred EEEEeCCCC--HHHHHHHH----HhcCCC-CceEEEeCChHH-----HHHHHHHCCCCE---EEec----hhhhhHHHHH
Confidence 999999873 34444443 333320 111012233332 112345778864 3443 4577777766
Q ss_pred HHHHh
Q 006969 331 MAFKC 335 (623)
Q Consensus 331 ~~L~~ 335 (623)
...+.
T Consensus 225 ~l~~a 229 (316)
T 3e96_A 225 EMLEA 229 (316)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55553
No 267
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=80.39 E-value=77 Score=35.19 Aligned_cols=209 Identities=13% Similarity=0.060 Sum_probs=122.7
Q ss_pred CCCHHHHHHHH----HHHhHcCCCEEEEe-cCCCChhHHHHHHHHHHHhccccccCCCccceEEeeccc------chhhH
Q 006969 97 TLTSKEKLDIA----RQLAKLGVDIIEAG-FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC------NERDI 165 (623)
Q Consensus 97 ~~t~e~Kl~Ia----~~L~~~Gvd~IEvG-fP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~------~~~dI 165 (623)
.++.++-.++. +.|.+.|||.|=+- +| +..|...+-...+.... + .|.++.++-. .=..+
T Consensus 118 ~~~~~e~~~~~~~qi~~l~~~gvD~l~~ET~~--~~~Ea~aa~~a~~~~~~------~-~Pv~vS~t~~~~g~~~~G~~~ 188 (566)
T 1q7z_A 118 STLFEEFYENFRETVEIMVEEGVDGIIFETFS--DILELKAAVLAAREVSR------D-VFLIAHMTFDEKGRSLTGTDP 188 (566)
T ss_dssp SBCHHHHHHHHHHHHHHHHHTTCSEEEEEEEC--CHHHHHHHHHHHHHHCS------S-SCEEEEECCCTTSCCTTSCCH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCCEEEEeccC--CHHHHHHHHHHHHHhCC------C-CcEEEEEEEcCCCeeCCCCcH
Confidence 35666655544 56678999987664 44 34454444333332100 1 2555555421 11247
Q ss_pred HHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCeEEEccc-------C---CCCCCHH
Q 006969 166 KTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVEFSPE-------D---AGRSDRK 234 (623)
Q Consensus 166 ~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~~V~f~~e-------d---a~r~d~e 234 (623)
+.++..+...+...|.+-.++.+-|+. ..++.++.. .. .+.+.|- + .+..+|+
T Consensus 189 ~~~~~~l~~~~~~avG~NC~~gp~~~~---------------~~l~~l~~~~~~-p~~vyPNaG~p~~~~~~~~~~~~p~ 252 (566)
T 1q7z_A 189 ANFAITFDELDIDALGINCSLGPEEIL---------------PIFQELSQYTDK-FLVVEPNAGKPIVENGKTVYPLKPH 252 (566)
T ss_dssp HHHHHHHHTSSCSEEEEESSSCHHHHH---------------HHHHHHHHTCCS-EEEEECCSSSCEEETTEEECCCCHH
T ss_pred HHHHHHhhccCCCEEEEeCCCCHHHHH---------------HHHHHHHhcCCC-EEEEEcCCCCCcccCCccccCCCHH
Confidence 778888888888888887776665543 233333332 22 2333221 1 1235789
Q ss_pred HHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCc-----ce--------------eEEE--ee-----
Q 006969 235 FLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIE-----NV--------------VIST--HC----- 288 (623)
Q Consensus 235 ~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~-----~v--------------~i~~--H~----- 288 (623)
++.+.++.+.+.|+..|.=| =..+|+.++.+-+.++..-|... .+ .++- ..
T Consensus 253 ~~a~~~~~~~~~G~~iiGGC---CGTtP~hI~aia~~~~~~~p~~~~~~~~~~~~s~~~~~~~~~~~iiGer~N~Tg~ds 329 (566)
T 1q7z_A 253 DFAVHIDSYYELGVNIFGGC---CGTTPEHVKLFRKVLGNRKPLQRKKKRIFAVSSPSKLVTFDHFVVIGERINPAGRKK 329 (566)
T ss_dssp HHHTTHHHHHHTTCSEECCC---TTCCHHHHHHHHHHHCSCCCCCCCCCCCCEEECSSCEEESSSCEEEEEEECCTTCHH
T ss_pred HHHHHHHHHHHcCCcEEccc---cCCCHHHHHHHHHHhcCCCCCCcccCccceecCCceeeccccceEEEEEecCCCChh
Confidence 89999999999998877533 13699999999888865432210 01 1121 11
Q ss_pred ------cCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 289 ------QNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 289 ------HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
++|.--+++-+..-++.||+.||... |......-..++.++..+.
T Consensus 330 f~~~~~~~~~~~a~~~A~~~v~~GAdiIDIgp-g~~~v~~~ee~~rvv~~i~ 380 (566)
T 1q7z_A 330 LWAEMQKGNEEIVIKEAKTQVEKGAEVLDVNF-GIESQIDVRYVEKIVQTLP 380 (566)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHTTCSEEEEEC-SSGGGSCHHHHHHHHHHHH
T ss_pred HHHHhhcCCHHHHHHHHHHHHHCCCCEEEECC-CCCCCCHHHHHHHHHHHHH
Confidence 34566788888999999999999983 3333333344555555554
No 268
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=80.18 E-value=3.8 Score=40.11 Aligned_cols=202 Identities=13% Similarity=0.051 Sum_probs=103.5
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCC----ChhHHHHHHHHHHHhccccccCCCccc-eEEe---eccc------chh
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAA----SKEDFEAVRTIAKEVGNAVDAESGYVP-VICG---LSRC------NER 163 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~----s~~d~e~v~~i~~~~~~~~~~~~~l~~-~i~~---~~r~------~~~ 163 (623)
++.++.+ +.+.++|++.||+..+.. .+.+.+.++.+.+.. ++.. .+.. |... ..+
T Consensus 16 ~~~~~~l---~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~--------gl~~~~~~~~~~~~~~~~~~~~~~~ 84 (281)
T 3u0h_A 16 TSLVLYL---DLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRR--------GLVLANLGLPLNLYDSEPVFLRELS 84 (281)
T ss_dssp CCHHHHH---HHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTT--------TCEECCEECCSCTTSCHHHHHHHHH
T ss_pred CCHHHHH---HHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHc--------CCceEEecccccccCCCHHHHHHHH
Confidence 5666554 556678999999975321 122344455444432 2211 1111 1110 012
Q ss_pred hHHHHHHHHhcCCCCEEEEEe-cCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccC---------CCCCCH
Q 006969 164 DIKTAWEAVKYAKRPRIHTFI-ATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED---------AGRSDR 233 (623)
Q Consensus 164 dI~~a~eal~~a~~~~v~i~~-~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ed---------a~r~d~ 233 (623)
.++++++..+..|.+.|.+.. +..+...+ ...+...+.+.++.++|++.|+. +.+-+.. ..-.++
T Consensus 85 ~~~~~i~~A~~lG~~~v~~~~~p~~~~~~~----~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~~~~~~~~~~~~~~~~ 159 (281)
T 3u0h_A 85 LLPDRARLCARLGARSVTAFLWPSMDEEPV----RYISQLARRIRQVAVELLPLGMR-VGLEYVGPHHLRHRRYPFVQSL 159 (281)
T ss_dssp THHHHHHHHHHTTCCEEEEECCSEESSCHH----HHHHHHHHHHHHHHHHHGGGTCE-EEEECCCCGGGCCSSEECCCSH
T ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCcch----hhHHHHHHHHHHHHHHHHHcCCE-EEEEeccccccccccccccCCH
Confidence 334556666667999887532 21110000 12345667777888889999984 5553322 123467
Q ss_pred HHHHHHHHHHHHcCCcEEeec-CcccccC-HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEE
Q 006969 234 KFLYEILGEVIKVGATTLNIP-DTVGITM-PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 311 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l~-DTvG~~~-P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd 311 (623)
+.+.++++.+ +...+.++ ||.=... .....+++ +.+. +-...+|++|..+.. .+. .+
T Consensus 160 ~~~~~l~~~v---~~~~vg~~~D~~h~~~~g~~~~~~~----~~~~---~~i~~vHl~D~~~~~---------~~~--~~ 218 (281)
T 3u0h_A 160 ADLKTFWEAI---GAPNVGALVDSYHWYTAGEHEDDLA----QLPP---EKVVYVHINDTRDAP---------EDA--HD 218 (281)
T ss_dssp HHHHHHHHHH---CCTTEEEEEEHHHHHHTTCCHHHHH----TSCG---GGEEEEEECBCSSCT---------TTC--CT
T ss_pred HHHHHHHHHc---CCCCeeEEeehhHHHHcCCCHHHHH----hcCc---ccEEEEEecCCCCCc---------ccc--hh
Confidence 7777777655 43333332 5432211 01112222 2232 235689999977632 010 00
Q ss_pred eccCCccCccCcccHHHHHHHHHhccc
Q 006969 312 VTINGIGERAGNASLEEVVMAFKCRGE 338 (623)
Q Consensus 312 ~Tv~GlGERaGNa~lEevv~~L~~~~~ 338 (623)
..-.-+|+ |..+..+++..|+..|.
T Consensus 219 ~~~~~~G~--G~id~~~~~~~L~~~gy 243 (281)
T 3u0h_A 219 GKRLLPGD--GRIPLVPFLRGLYLAGY 243 (281)
T ss_dssp TSCBCTTS--SSSCHHHHHHHHHHHTC
T ss_pred ccCcCCCC--cCcCHHHHHHHHHHcCC
Confidence 01122444 89999999999998653
No 269
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=80.06 E-value=25 Score=35.91 Aligned_cols=200 Identities=15% Similarity=0.151 Sum_probs=104.5
Q ss_pred EEeCC----CcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEee
Q 006969 82 VFDTT----LRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL 157 (623)
Q Consensus 82 I~DtT----LRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~ 157 (623)
.+.+| ++||.+. .+.+.-++.++.+.+.|-|+|.+|.......+.+.++++...+.. +.+... +| |+.
T Consensus 18 riNvTg~~sf~~~~~~----~~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~-~~~~~~-vp-isI- 89 (300)
T 3k13_A 18 RCNVAGSRKFLRLVNE----KKYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMS-EPEIAR-VP-VMI- 89 (300)
T ss_dssp EEETTTCHHHHHHHHT----TCHHHHHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHT-CHHHHT-SC-EEE-
T ss_pred eccCCCCHHHHHHHhc----CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHH-hhhcCC-Ce-EEE-
Confidence 55777 6676654 478999999999999999999999632211122223333222110 000000 12 211
Q ss_pred cccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccC--CCCCCH--
Q 006969 158 SRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDR-- 233 (623)
Q Consensus 158 ~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ed--a~r~d~-- 233 (623)
--.+.+-++.++++. +|.+.|. ++|- ...++.++ +++..++++|.. |...+.| +...+.
T Consensus 90 DT~~~~V~eaaL~~~--~Ga~iIN---dIs~--------~~~d~~~~---~~~~l~a~~ga~-vV~mh~d~~G~p~t~~~ 152 (300)
T 3k13_A 90 DSSKWEVIEAGLKCL--QGKSIVN---SISL--------KEGEEVFL---EHARIIKQYGAA-TVVMAFDEKGQADTAAR 152 (300)
T ss_dssp ECSCHHHHHHHHHHC--SSCCEEE---EECS--------TTCHHHHH---HHHHHHHHHTCE-EEEESEETTEECCSHHH
T ss_pred eCCCHHHHHHHHHhc--CCCCEEE---eCCc--------ccCChhHH---HHHHHHHHhCCe-EEEEeeCCCCCCCCHHH
Confidence 123556667776642 3666554 4431 11123333 566777788885 5443332 222233
Q ss_pred --HHHHHHHHHH-HHcCC--cEEee-cC--cccccCHH------HHHHHHHHHHHhCCCCcceeEEEeecCC-cchH---
Q 006969 234 --KFLYEILGEV-IKVGA--TTLNI-PD--TVGITMPT------EFGKLIADIKANTPGIENVVISTHCQND-LGLS--- 295 (623)
Q Consensus 234 --e~l~~~~~~~-~~aGa--~~I~l-~D--TvG~~~P~------~v~~li~~l~~~~~~~~~v~i~~H~HND-~GlA--- 295 (623)
++..++.+.+ .++|. +.|.| |= ++|..... ++-+-++.+++.+|+ +|+.+=..|- +|+-
T Consensus 153 ~~~i~~r~~~~~~~~~Gi~~~~IilDPgig~~gk~~~~~~~~~~~~l~~l~~lk~~lPg---~pvl~G~SnkSfglp~~~ 229 (300)
T 3k13_A 153 KIEVCERAYRLLVDKVGFNPHDIIFDPNVLAVATGIEEHNNYAVDFIEATGWIRKNLPG---AHVSGGVSNLSFSFRGNN 229 (300)
T ss_dssp HHHHHHHHHHHHHHHTCCCGGGEEEECCCCCCSSSCGGGTTHHHHHHHHHHHHHHHSTT---CEECCBGGGGGGGGTTCH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHEEEeCCCCccCCChHHhhHHHHHHHHHHHHHHHhCCC---CCEEEEECcccccCCCCc
Confidence 3444455554 67898 34443 21 23433322 455666777777875 4454444442 4441
Q ss_pred ----HHHH---HHHHHhCCCE
Q 006969 296 ----TANT---IAGACAGARQ 309 (623)
Q Consensus 296 ----vANs---laAv~aGA~~ 309 (623)
..|+ ..|+++|.+.
T Consensus 230 ~~R~~~n~~fl~~ai~~Gld~ 250 (300)
T 3k13_A 230 YIREAMHAVFLYHAIQQGMDM 250 (300)
T ss_dssp HHHHHHHHHHHHHHHHTTCCE
T ss_pred chhHHHHHHHHHHHHHcCCCE
Confidence 2233 3678889876
No 270
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=79.97 E-value=20 Score=35.12 Aligned_cols=156 Identities=13% Similarity=0.142 Sum_probs=89.7
Q ss_pred eEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCC----ChhH--HHHHHHHHHHhccccccCCCccce
Q 006969 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAA----SKED--FEAVRTIAKEVGNAVDAESGYVPV 153 (623)
Q Consensus 80 v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~----s~~d--~e~v~~i~~~~~~~~~~~~~l~~~ 153 (623)
|++.-++ |. |.-..+++.|+.=++. .+.|-|.|++-.+.. ...+ .+.++.+.+..+. ...+.
T Consensus 51 v~v~tvi---gF--P~G~~~~~~k~~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~------~~lKv 118 (226)
T 1vcv_A 51 VKLCVVA---DF--PFGALPTASRIALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGG------RVVKV 118 (226)
T ss_dssp SEEEEEE---ST--TTCCSCHHHHHHHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT------SEEEE
T ss_pred CeEEEEe---CC--CCCCCchHHHHHHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcC------CCceE
Confidence 6665553 43 2233689999999999 999999999975421 1111 2444555554321 12345
Q ss_pred EEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC
Q 006969 154 ICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHK----LRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (623)
Q Consensus 154 i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~----l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~ 229 (623)
|.-.+-...+.|..+.+...++|.+-|.....-++.--+.. -|-|.+. ++.+++.++ +.|.. +-+-+--+-
T Consensus 119 IlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~d-v~lm~~~i~---~~g~~-v~vKaaGGi 193 (226)
T 1vcv_A 119 ITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPER-AAAIARYIK---EKGYR-LGVKMAGGI 193 (226)
T ss_dssp ECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHH-HHHHHHHHH---HHTCC-CEEEEESSC
T ss_pred EEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHH-HHHHHHHHH---HhCCC-ceEEEeCCC
Confidence 65555556777888777777789998766422221000111 2345544 344454444 33432 344332233
Q ss_pred CCCHHHHHHHHHHHHHcCCc----EEeec
Q 006969 230 RSDRKFLYEILGEVIKVGAT----TLNIP 254 (623)
Q Consensus 230 r~d~e~l~~~~~~~~~aGa~----~I~l~ 254 (623)
|+ .+.++++++.+ ++|++ ||.-.
T Consensus 194 rt-~~~al~~i~a~-~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 194 RT-REQAKAIVDAI-GWGEDPARVRLGTS 220 (226)
T ss_dssp CS-HHHHHHHHHHH-CSCSCTTTEEEEES
T ss_pred CC-HHHHHHHHHHH-HCCCCcCCceEecC
Confidence 44 78888888887 68999 77653
No 271
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=79.93 E-value=29 Score=35.01 Aligned_cols=143 Identities=10% Similarity=-0.011 Sum_probs=79.1
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEec--CC-CC-----hhH-HHHHHHHHHHhccccccCCCccceEEeecccchhhHH
Q 006969 96 ATLTSKEKLDIARQLAKLGVDIIEAGF--PA-AS-----KED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIK 166 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~Gvd~IEvGf--P~-~s-----~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~ 166 (623)
...+.++.++-++.|.+.|++.|-+.. +. .. +.+ .+.++.+.+. . ++ ..+. +.-+++..+.
T Consensus 31 r~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~-----~---gi-~~ir-~~~~~p~~l~ 100 (304)
T 2qgq_A 31 RSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSL-----N---GE-FWIR-VMYLHPDHLT 100 (304)
T ss_dssp CBCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTS-----S---SS-CEEE-ECCCCGGGCC
T ss_pred eeeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhc-----C---CC-cEEE-EeeeecccCC
Confidence 346889999999999999999876531 11 11 112 2344444331 0 11 1221 1223444442
Q ss_pred -HHHHHHhcCC--CCEEEEEecCCHHHHHHHhCC--CHHHHHHHHHHHHHHHHH--cCCCeEEEcccCCC-CCCHHHHHH
Q 006969 167 -TAWEAVKYAK--RPRIHTFIATSGIHMEHKLRK--TKQQVVEIARSMVKFARS--LGCDDVEFSPEDAG-RSDRKFLYE 238 (623)
Q Consensus 167 -~a~eal~~a~--~~~v~i~~~~Sd~h~~~~l~~--t~ee~l~~~~~~v~~ak~--~G~~~V~f~~eda~-r~d~e~l~~ 238 (623)
..++.++.+| .+.+++-+-+.+-.+.+.+++ +.+ .+.+.++.+++ .|+. +..+..-+. .-+.+.+.+
T Consensus 101 ~e~l~~l~~~g~~~~~l~i~lqs~s~~vl~~m~r~~t~e----~~~~~i~~l~~~~~gi~-i~~~~IvG~PgEt~ed~~~ 175 (304)
T 2qgq_A 101 EEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSE----ELKKMLSSIRERFPDAV-LRTSIIVGFPGETEEDFEE 175 (304)
T ss_dssp HHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTTCCSCHH----HHHHHHHHHHHHCTTCE-EEEEEEECCTTCCHHHHHH
T ss_pred HHHHHHHHhCCCCccEEEEecccCCHHHHHHhCCCCCHH----HHHHHHHHHHhhCCCCE-EEEEEEEeCCCCCHHHHHH
Confidence 2356677778 788988665433344445654 444 45556777777 4653 332222121 345577778
Q ss_pred HHHHHHHcCCcEEee
Q 006969 239 ILGEVIKVGATTLNI 253 (623)
Q Consensus 239 ~~~~~~~aGa~~I~l 253 (623)
.++.+.+.+.+.+.+
T Consensus 176 t~~~l~~l~~~~v~~ 190 (304)
T 2qgq_A 176 LKQFVEEIQFDKLGA 190 (304)
T ss_dssp HHHHHHHHCCSEEEE
T ss_pred HHHHHHHcCCCEEEE
Confidence 888888888776543
No 272
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=79.78 E-value=9.4 Score=40.07 Aligned_cols=119 Identities=12% Similarity=0.098 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
+..++.++-+++++.|.+.|++.||-.+| +.+++..+++.+...- |.+.+=.-....+++..++.
T Consensus 198 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~~~~~~~~l~~~~~i---------PI~~de~i~~~~~~~~~i~~--- 262 (384)
T 2pgw_A 198 NEGWSVHDAINMCRKLEKYDIEFIEQPTV---SWSIPAMAHVREKVGI---------PIVADQAAFTLYDVYEICRQ--- 262 (384)
T ss_dssp TTCCCHHHHHHHHHHHGGGCCSEEECCSC---TTCHHHHHHHHHHCSS---------CEEESTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEeCCCC---hhhHHHHHHHHhhCCC---------CEEEeCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHH
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGE 242 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~ 242 (623)
...+.|.+ +..+--.+..+.+++++|+++|+. +..+....+.......+.++..
T Consensus 263 ~~~d~v~i-------------k~~~~GGit~~~~i~~~A~~~g~~-~~~~~~~es~i~~aa~~hlaaa 316 (384)
T 2pgw_A 263 RAADMICI-------------GPREIGGIQPMMKAAAVAEAAGLK-ICIHSSFTTGITTCAEHHIGLA 316 (384)
T ss_dssp TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHTTCC-EEECCCSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEE-------------cchhhCCHHHHHHHHHHHHHCCCe-EeeccCcCCHHHHHHHHHHHHh
No 273
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=79.71 E-value=7.6 Score=39.39 Aligned_cols=99 Identities=8% Similarity=-0.040 Sum_probs=64.6
Q ss_pred hcCCCCEEEEEecCCHHHHHHHh------CCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHc
Q 006969 173 KYAKRPRIHTFIATSGIHMEHKL------RKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKV 246 (623)
Q Consensus 173 ~~a~~~~v~i~~~~Sd~h~~~~l------~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~a 246 (623)
..+|++.|- ...|- -+ ..+ ..|.+|++..++..++-++. ..|..+.+.++..+++.+.+.+.++.++
T Consensus 46 e~aG~d~il--vGdSl-~~-~~lG~~dt~~vtldem~~h~~aV~r~~~~---~~vvaD~pfgsY~s~~~a~~~a~rl~ka 118 (275)
T 3vav_A 46 DRANVDVQL--IGDSL-GN-VLQGQTTTLPVTLDDIAYHTACVARAQPR---ALIVADLPFGTYGTPADAFASAVKLMRA 118 (275)
T ss_dssp HHTTCSEEE--ECTTH-HH-HTTCCSSSTTCCHHHHHHHHHHHHHTCCS---SEEEEECCTTSCSSHHHHHHHHHHHHHT
T ss_pred HHcCCCEEE--ECcHH-HH-HHcCCCCCCccCHHHHHHHHHHHHhcCCC---CCEEEecCCCCCCCHHHHHHHHHHHHHc
Confidence 346888872 22232 12 233 45778777765554442211 1367777665348999999999999999
Q ss_pred CCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeec
Q 006969 247 GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQ 289 (623)
Q Consensus 247 Ga~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~H 289 (623)
||+.|.|-|.. +..+.|+.|++. .+++--|.=
T Consensus 119 Ga~aVklEdg~------~~~~~i~~l~~~-----GIpv~gHlg 150 (275)
T 3vav_A 119 GAQMVKFEGGE------WLAETVRFLVER-----AVPVCAHVG 150 (275)
T ss_dssp TCSEEEEECCG------GGHHHHHHHHHT-----TCCEEEEEE
T ss_pred CCCEEEECCch------hHHHHHHHHHHC-----CCCEEEecC
Confidence 99999999974 456777777764 245666753
No 274
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=79.43 E-value=57 Score=33.07 Aligned_cols=193 Identities=14% Similarity=0.101 Sum_probs=115.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEe-----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAG-----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvG-----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (623)
.+..+.-.++++.|.+.|++-|=+. ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+-
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-------grvpViaGvg~~~t~~ai~la~ 100 (303)
T 2wkj_A 28 ALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAK-------GKIKLIAHVGCVSTAESQQLAA 100 (303)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TTSEEEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHHH
Confidence 3788888899999999999999873 465666665 55555555542 2357888887655444 44443
Q ss_pred HHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHcC
Q 006969 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~aG 247 (623)
. ...+|++.+-+..|-. .+.|.+++++-..+..+.. + ++..+-|+ |. .+...+++.+.+++ + -
T Consensus 101 ~-A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a~-~-~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 165 (303)
T 2wkj_A 101 S-AKRYGFDAVSAVTPFY-------YPFSFEEHCDHYRAIIDSA-D-GLPMVVYNIPALSGVKLTLDQINTLV----T-L 165 (303)
T ss_dssp H-HHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHHH-T-TCCEEEEECHHHHCCCCCHHHHHHHH----T-S
T ss_pred H-HHhCCCCEEEecCCCC-------CCCCHHHHHHHHHHHHHhC-C-CCCEEEEeCccccCCCCCHHHHHHHh----c-C
Confidence 2 3445899887765532 3457777776666554433 2 25545554 42 23346777776665 3 2
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccHH
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
...+.+.||.|- ..++.++++. .++ .. -+-..++ ..+.++..|++.+ +.| .+|+..+
T Consensus 166 pnIvgiK~s~gd--~~~~~~~~~~----~~~---f~-v~~G~d~------~~~~~l~~G~~G~---is~----~an~~P~ 222 (303)
T 2wkj_A 166 PGVGALXQTSGD--LYQMEQIRRE----HPD---LV-LYNGYDN------IFASGLLAGADGG---IGS----TYNIMGW 222 (303)
T ss_dssp TTEEEEEECCCC--HHHHHHHHHH----CTT---CE-EEECCGG------GHHHHHHHTCCEE---EET----THHHHHH
T ss_pred CCEEEEeCCCCC--HHHHHHHHHh----CCC---eE-EEeCcHH------HHHHHHHCCCCEE---EeC----HHHhCHH
Confidence 679999999984 3455555442 232 11 1223332 2556677898754 333 3566666
Q ss_pred HHHHHHH
Q 006969 328 EVVMAFK 334 (623)
Q Consensus 328 evv~~L~ 334 (623)
.++...+
T Consensus 223 ~~~~l~~ 229 (303)
T 2wkj_A 223 RYQGIVK 229 (303)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6555444
No 275
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=79.41 E-value=32 Score=35.99 Aligned_cols=192 Identities=15% Similarity=0.049 Sum_probs=103.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCCh--------------hH-HHHHHHHHHHhccccccCCCccceEEeecccc
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASK--------------ED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRCN 161 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~--------------~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~ 161 (623)
..+.+.-..+++.-.+++-+.|=-.+|.... .. ...++.+++.. -+|+..=+=-+.
T Consensus 28 v~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~~g~~~~~~v~g~~~~a~~v~~~A~~~---------~VPVaLHlDHg~ 98 (349)
T 3elf_A 28 CTSSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKDMVTGAVALAEFTHVIAAKY---------PVNVALHTDHCP 98 (349)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHTTS---------SSCEEEEECCCC
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhcCcchhhhhhhhHHHHHHHHHHHHHHC---------CCCEEEECCCCC
Confidence 3578889999999999999866433332110 00 12223333211 145544444444
Q ss_pred hhh--------HHHHHHHHhc---CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------c
Q 006969 162 ERD--------IKTAWEAVKY---AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------S 224 (623)
Q Consensus 162 ~~d--------I~~a~eal~~---a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~ 224 (623)
..+ ++...++++. +|...|-+ . .| ..+.|||++..++.+++|+..|+. |+- +
T Consensus 99 ~~~ld~~~~~~l~~~~~~i~~~i~~GFtSVMi-D-gS--------~lp~eENi~~Tk~vv~~ah~~gvs-VEaElG~iGG 167 (349)
T 3elf_A 99 KDKLDSYVRPLLAISAQRVSKGGNPLFQSHMW-D-GS--------AVPIDENLAIAQELLKAAAAAKII-LEIEIGVVGG 167 (349)
T ss_dssp GGGGGGTHHHHHHHHHHHHHTTCCCSCSEEEE-C-CT--------TSCHHHHHHHHHHHHHHHHHTTCE-EEEEESCCBC
T ss_pred CcccchhhhhhHHHHHHHHHHHhhcCCCEEEe-c-CC--------CCCHHHHHHHHHHHHHHHHHcCCe-EEEEeecccc
Confidence 322 2233444443 35666543 2 22 237899999999999999999974 542 2
Q ss_pred ccC--------CCCCCHHHHHHHHHHHH--HcCCcEEeec--Cccccc-------CHHHHHHHHHHHHHhCC---CCcce
Q 006969 225 PED--------AGRSDRKFLYEILGEVI--KVGATTLNIP--DTVGIT-------MPTEFGKLIADIKANTP---GIENV 282 (623)
Q Consensus 225 ~ed--------a~r~d~e~l~~~~~~~~--~aGa~~I~l~--DTvG~~-------~P~~v~~li~~l~~~~~---~~~~v 282 (623)
-|| ...|+|+.+.+++++.- ..|+|.+-++ -.=|.. .|+.+.++=+.+.+.++ ...++
T Consensus 168 ~Edgv~~~~~~~~yT~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~~~~~~~~~~v 247 (349)
T 3elf_A 168 EEDGVANEINEKLYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPF 247 (349)
T ss_dssp -------------CCCHHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHHHTCCTTCCCC
T ss_pred ccCCcccccccccCCCHHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhhcCCccccCCC
Confidence 222 24689999988887652 2347765553 222322 34444444444433332 11136
Q ss_pred eEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 283 VISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 283 ~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
||-+|.= .|.....-..|+..|+.-|
T Consensus 248 pLVlHGg--SG~p~e~i~~ai~~GV~Ki 273 (349)
T 3elf_A 248 DFVFHGG--SGSLKSEIEEALRYGVVKM 273 (349)
T ss_dssp CEEECCC--TTCCHHHHHHHHHTTEEEE
T ss_pred cEEEeCC--CCCCHHHHHHHHHcCCEEE
Confidence 7887753 4555556666666665544
No 276
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=79.36 E-value=15 Score=35.60 Aligned_cols=114 Identities=11% Similarity=0.051 Sum_probs=71.8
Q ss_pred hhhHHHHHHHHhcCCCCEEEEEecCC--HHHHHH--HhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHH
Q 006969 162 ERDIKTAWEAVKYAKRPRIHTFIATS--GIHMEH--KLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLY 237 (623)
Q Consensus 162 ~~dI~~a~eal~~a~~~~v~i~~~~S--d~h~~~--~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~ 237 (623)
..+++.+++.++.+|.+.|-++.... .-|..+ ....+.+ .+.+..+.+++.|++.+.+++. . ....+.+.
T Consensus 21 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gl~i~~~~~~-~-~~~~~~~~ 94 (262)
T 3p6l_A 21 LFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQ----TQKEIKELAASKGIKIVGTGVY-V-AEKSSDWE 94 (262)
T ss_dssp TSCHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHH----HHHHHHHHHHHTTCEEEEEEEE-C-CSSTTHHH
T ss_pred CCCHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHH----HHHHHHHHHHHcCCeEEEEecc-C-CccHHHHH
Confidence 34677888888889999998875321 000000 1123332 3445667788899864344432 1 13456788
Q ss_pred HHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCC
Q 006969 238 EILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQND 291 (623)
Q Consensus 238 ~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND 291 (623)
+.++.+.+.|+..|.+.- | ++.+.++.....+. ++.|.+|.|+.
T Consensus 95 ~~i~~A~~lGa~~v~~~~--~---~~~~~~l~~~a~~~-----gv~l~~En~~~ 138 (262)
T 3p6l_A 95 KMFKFAKAMDLEFITCEP--A---LSDWDLVEKLSKQY-----NIKISVHNHPQ 138 (262)
T ss_dssp HHHHHHHHTTCSEEEECC--C---GGGHHHHHHHHHHH-----TCEEEEECCSS
T ss_pred HHHHHHHHcCCCEEEecC--C---HHHHHHHHHHHHHh-----CCEEEEEeCCC
Confidence 999999999999999862 2 45566666655543 36789999853
No 277
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=79.23 E-value=22 Score=36.12 Aligned_cols=103 Identities=17% Similarity=0.114 Sum_probs=67.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecCcccccCH---H---HHHHHHHHHHHhCCCCc-ceeEEEeecCCcchHHHHHHH
Q 006969 229 GRSDRKFLYEILGEVIKVGATTLNIPDTVGITMP---T---EFGKLIADIKANTPGIE-NVVISTHCQNDLGLSTANTIA 301 (623)
Q Consensus 229 ~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P---~---~v~~li~~l~~~~~~~~-~v~i~~H~HND~GlAvANsla 301 (623)
+..+.+--..-++.+++.||+.|-+.=-.|.+.- . .+.+-|+.+++..++.. +++|+.-.=+|.-.=..-+..
T Consensus 101 G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L~d~e~i~~A~~i 180 (281)
T 2a4a_A 101 GTDSMEKVLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGELKTEDLIIKTTLA 180 (281)
T ss_dssp CCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHHCSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHHHH
Confidence 3456665556667788889999887777775543 3 56666777776554311 234554444555433456788
Q ss_pred HHHhCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 302 GACAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 302 Av~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
|+++||+.|-++- |.+ +|++.+|++-...+
T Consensus 181 a~eaGADfVKTST-Gf~--~~gAT~edv~lm~~ 210 (281)
T 2a4a_A 181 VLNGNADFIKTST-GKV--QINATPSSVEYIIK 210 (281)
T ss_dssp HHTTTCSEEECCC-SCS--SCCCCHHHHHHHHH
T ss_pred HHHhCCCEEEeCC-CCC--CCCCCHHHHHHHHH
Confidence 9999999999885 222 47899988765544
No 278
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=79.22 E-value=13 Score=37.20 Aligned_cols=141 Identities=19% Similarity=0.104 Sum_probs=95.7
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc---cCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP---EDAGRSDRKFLYEILGEVIKVGATTLNI 253 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~---eda~r~d~e~l~~~~~~~~~aGa~~I~l 253 (623)
++.+.+-..+|-++- + +.+++-++.++++|+. |.++- |.+... ..+.++++.+.+.|-+.|-|
T Consensus 39 ID~lKfg~Gt~~l~~--------~---~~l~eki~l~~~~gV~-v~~GGTl~E~~~~q--g~~~~yl~~~k~lGf~~iEi 104 (251)
T 1qwg_A 39 IDFVKFGWGTSAVID--------R---DVVKEKINYYKDWGIK-VYPGGTLFEYAYSK--GKFDEFLNECEKLGFEAVEI 104 (251)
T ss_dssp CSEEEECTTGGGGSC--------H---HHHHHHHHHHHTTTCE-EEECHHHHHHHHHT--TCHHHHHHHHHHHTCCEEEE
T ss_pred cceEEecCceeeecC--------H---HHHHHHHHHHHHcCCe-EECCcHHHHHHHHc--CcHHHHHHHHHHcCCCEEEE
Confidence 456666555554322 2 2355888999999974 65532 211111 14556677777889999999
Q ss_pred cCcccccCHHHHHHHHHHHHHh-CCCCcceeEEEeec-------CCcchHHHHHHHHHHhCCCEE--Ee----ccCCccC
Q 006969 254 PDTVGITMPTEFGKLIADIKAN-TPGIENVVISTHCQ-------NDLGLSTANTIAGACAGARQV--EV----TINGIGE 319 (623)
Q Consensus 254 ~DTvG~~~P~~v~~li~~l~~~-~~~~~~v~i~~H~H-------ND~GlAvANslaAv~aGA~~V--d~----Tv~GlGE 319 (623)
.|-.--+.+++-.++|+.+++. + .+..++.-- -+...-+......++|||+.| ++ +..||=+
T Consensus 105 S~G~i~l~~~~~~~~I~~~~~~G~----~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEarEsG~~iGi~~ 180 (251)
T 1qwg_A 105 SDGSSDISLEERNNAIKRAKDNGF----MVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGRESGKGKGLFD 180 (251)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHTTC----EEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECCTTTCCSSTTBC
T ss_pred CCCcccCCHHHHHHHHHHHHHCCC----EEeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEeeecccCCcccCC
Confidence 9999999999999999999987 4 233343322 244666778889999999996 33 2237778
Q ss_pred ccCcccHHHHHHHHHh
Q 006969 320 RAGNASLEEVVMAFKC 335 (623)
Q Consensus 320 RaGNa~lEevv~~L~~ 335 (623)
..||.....+-..+..
T Consensus 181 ~~g~~r~d~v~~i~~~ 196 (251)
T 1qwg_A 181 KEGKVKENELDVLAKN 196 (251)
T ss_dssp TTSCBCHHHHHHHHTT
T ss_pred CCCCCcHHHHHHHHHh
Confidence 9999998776554443
No 279
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=79.14 E-value=17 Score=38.46 Aligned_cols=131 Identities=10% Similarity=0.031 Sum_probs=82.1
Q ss_pred HHHHHh-cCCCCEEEEEecC--------CHH--HH-HHHhCC-CHHHHHHHHHHHHHHHHHc-CCC--eEEEcccCC---
Q 006969 168 AWEAVK-YAKRPRIHTFIAT--------SGI--HM-EHKLRK-TKQQVVEIARSMVKFARSL-GCD--DVEFSPEDA--- 228 (623)
Q Consensus 168 a~eal~-~a~~~~v~i~~~~--------Sd~--h~-~~~l~~-t~ee~l~~~~~~v~~ak~~-G~~--~V~f~~eda--- 228 (623)
+.+..+ .+|.+.|.|-.+. |+. ++ ...+|- +.+.-.+.+.+.|+.+|+. |-+ .|.+++.+.
T Consensus 179 AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~~ 258 (379)
T 3aty_A 179 GAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHG 258 (379)
T ss_dssp HHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGG
T ss_pred HHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECccccccc
Confidence 334456 7899999887653 222 11 234555 7777777778888877764 321 255677531
Q ss_pred --CCCCHHHHHHHHHHHHHcCCcEEeecCcc--cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 006969 229 --GRSDRKFLYEILGEVIKVGATTLNIPDTV--GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (623)
Q Consensus 229 --~r~d~e~l~~~~~~~~~aGa~~I~l~DTv--G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 304 (623)
...+.+...++++.+.++|++.|.+.-.. +-..|. + ++.+++.++ +||..=.- . -...+..+++
T Consensus 259 ~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~---~-~~~ir~~~~----iPvi~~G~--i--t~~~a~~~l~ 326 (379)
T 3aty_A 259 MIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGD---V-VAWVRGSYS----GVKISNLR--Y--DFEEADQQIR 326 (379)
T ss_dssp CCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCC---H-HHHHHTTCC----SCEEEESS--C--CHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccH---H-HHHHHHHCC----CcEEEECC--C--CHHHHHHHHH
Confidence 34567888899999999999999886521 011233 4 777888774 34433221 2 2566778888
Q ss_pred hC-CCEE
Q 006969 305 AG-ARQV 310 (623)
Q Consensus 305 aG-A~~V 310 (623)
.| ||.|
T Consensus 327 ~g~aD~V 333 (379)
T 3aty_A 327 EGKVDAV 333 (379)
T ss_dssp TTSCSEE
T ss_pred cCCCeEE
Confidence 87 7766
No 280
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=79.08 E-value=26 Score=35.70 Aligned_cols=172 Identities=17% Similarity=0.176 Sum_probs=92.2
Q ss_pred HHHHhHcCCCEEEEec----CCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchh-------hHH---HHHHHH
Q 006969 107 ARQLAKLGVDIIEAGF----PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNER-------DIK---TAWEAV 172 (623)
Q Consensus 107 a~~L~~~Gvd~IEvGf----P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~-------dI~---~a~eal 172 (623)
+....+.|.|.||+-. ++..|. ...++.+.+... +| +..+.|.+.. +++ .-++..
T Consensus 52 a~~A~~gGAdRIELc~~l~~GGlTPS-~g~i~~a~~~~~---------ip-V~vMIRPRgGdF~Ys~~E~~~M~~dI~~~ 120 (287)
T 3iwp_A 52 AVNAERGGADRIELCSGLSEGGTTPS-MGVLQVVKQSVQ---------IP-VFVMIRPRGGDFLYSDREIEVMKADIRLA 120 (287)
T ss_dssp HHHHHHHTCSEEEECBCGGGTCBCCC-HHHHHHHHTTCC---------SC-EEEECCSSSSCSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEECCCCCCCCCCCC-HHHHHHHHHhcC---------CC-eEEEEecCCCCcccCHHHHHHHHHHHHHH
Confidence 4455788999999952 222222 335555544321 12 4455666543 121 123344
Q ss_pred hcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc-CCCCCCHHHHHHHHHHHHHcCCcEE
Q 006969 173 KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-DAGRSDRKFLYEILGEVIKVGATTL 251 (623)
Q Consensus 173 ~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e-da~r~d~e~l~~~~~~~~~aGa~~I 251 (623)
+.+|++.|.+=.=+.|- ..+ ++.+++.++.++. +. |.|... |.. .|+. +.++.+++.|.++|
T Consensus 121 ~~~GAdGvVfG~L~~dg------~iD----~~~~~~Li~~a~~--l~-vTFHRAFD~~-~d~~---~Ale~Li~lGvdrI 183 (287)
T 3iwp_A 121 KLYGADGLVFGALTEDG------HID----KELCMSLMAICRP--LP-VTFHRAFDMV-HDPM---AALETLLTLGFERV 183 (287)
T ss_dssp HHTTCSEEEECCBCTTS------CBC----HHHHHHHHHHHTT--SC-EEECGGGGGC-SCHH---HHHHHHHHHTCSEE
T ss_pred HHcCCCEEEEeeeCCCC------CcC----HHHHHHHHHHcCC--Cc-EEEECchhcc-CCHH---HHHHHHHHcCCCEE
Confidence 55699988764423331 112 2345566666654 33 778553 433 2443 55677788899999
Q ss_pred eecCcccccC-HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH-hCCCEEEeccC
Q 006969 252 NIPDTVGITM-PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQVEVTIN 315 (623)
Q Consensus 252 ~l~DTvG~~~-P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~-aGA~~Vd~Tv~ 315 (623)
-. .|... ..+=-++++.+.+...+ +++|-. .-|.-..|.-.-++ +|++.+|.|..
T Consensus 184 LT---SG~~~~a~~Gl~~Lk~Lv~~a~~--rI~Ima----GGGV~~~Ni~~l~~~tG~~~~H~S~~ 240 (287)
T 3iwp_A 184 LT---SGCDSSALEGLPLIKRLIEQAKG--RIVVMP----GGGITDRNLQRILEGSGATEFHCSAR 240 (287)
T ss_dssp EE---CTTSSSTTTTHHHHHHHHHHHTT--SSEEEE----CTTCCTTTHHHHHHHHCCSEEEECCE
T ss_pred EC---CCCCCChHHhHHHHHHHHHHhCC--CCEEEE----CCCcCHHHHHHHHHhhCCCEEeECcC
Confidence 85 44321 12222334444443332 244443 35555667766565 89999999864
No 281
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=78.98 E-value=14 Score=38.57 Aligned_cols=157 Identities=9% Similarity=0.082 Sum_probs=95.4
Q ss_pred chhhHHHH-HHHH---hcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHH-HcCCC-eEEEcccCCCCCCHH
Q 006969 161 NERDIKTA-WEAV---KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFAR-SLGCD-DVEFSPEDAGRSDRK 234 (623)
Q Consensus 161 ~~~dI~~a-~eal---~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak-~~G~~-~V~f~~eda~r~d~e 234 (623)
.++|+.+. ++.+ ..-|+..+-++. ++ +....-|.+.+++++.+.+.++.++ +.|+. .+.+++. -..+++
T Consensus 75 ~~e~~~~~~~~~l~~~~~dgV~y~Eir~--~P-~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~--R~~~~~ 149 (343)
T 3rys_A 75 TEQDFTDMTRAYLERAAAGGVRHAEIMM--DP-QAHTSRGVALETCVNGVANALATSEEDFGVSTLLIAAFL--RDMSED 149 (343)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEEEEEE--CH-HHHHTTTCCHHHHHHHHHHHHTTHHHHHSCEEEEEEEEE--TTSCHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEEe--cH-HHhccCCCCHHHHHHHHHHHHHHHhhcCceeEEEEEEeC--CCCCHH
Confidence 45565432 3332 223544444433 34 2223457899999999999888775 45753 2334553 234677
Q ss_pred HHHHHHHHHHHc--CCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH-hCCCEEE
Q 006969 235 FLYEILGEVIKV--GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQVE 311 (623)
Q Consensus 235 ~l~~~~~~~~~a--Ga~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~-aGA~~Vd 311 (623)
...+.++.+.+. ++..|.|+=.-....|..+.+.++..++. ++++.+|+.-..+ ..+...|+. .|+++|+
T Consensus 150 ~a~~~l~~a~~~~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~-----gl~~~~HagE~~~--~~~i~~al~~lg~~rIg 222 (343)
T 3rys_A 150 SALEVLDQLLAMHAPIAGIGLDSAEVGNPPSKFERLYQRAAEA-----GLRRIAHAGEEGP--ASYITEALDVLHVERID 222 (343)
T ss_dssp HHHHHHHHHHHTTCCCCEEEEESCCTTCCGGGGHHHHHHHHHT-----TCEEEEEESSSSC--HHHHHHHHHTSCCSEEE
T ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCHHHHHHHHHHHHHC-----CCeEEEeeCCCCC--HHHHHHHHhcCCcceee
Confidence 788888877765 34555554222345778888888887764 2678999987654 457778897 8999873
Q ss_pred eccCCccCccCcccHHHHHHHHHhc
Q 006969 312 VTINGIGERAGNASLEEVVMAFKCR 336 (623)
Q Consensus 312 ~Tv~GlGERaGNa~lEevv~~L~~~ 336 (623)
-|-+... + ++++..|..+
T Consensus 223 -----Hgv~l~~-d-~~l~~~l~~~ 240 (343)
T 3rys_A 223 -----HGIRCME-D-TDVVQRLVAE 240 (343)
T ss_dssp -----ECGGGGG-C-HHHHHHHHHH
T ss_pred -----eeeeecC-C-hHHHHHHHhc
Confidence 3332221 0 3456666654
No 282
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=78.97 E-value=8.9 Score=40.32 Aligned_cols=125 Identities=14% Similarity=0.102 Sum_probs=79.4
Q ss_pred HhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC--eEEEcccCCC----C-CCH
Q 006969 172 VKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD--DVEFSPEDAG----R-SDR 233 (623)
Q Consensus 172 l~~a~~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~--~V~f~~eda~----r-~d~ 233 (623)
.+.+|.+.|.|-.+- |+. ++...+|-|.+.-.+.+.+.|+.+|+. |.+ .|.+++.+.. . .+.
T Consensus 162 a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~ 241 (362)
T 4ab4_A 162 AKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRA 241 (362)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHH
T ss_pred HHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcH
Confidence 456899999987764 332 333456667777777777777777764 321 3567875421 1 225
Q ss_pred HHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-CCEE
Q 006969 234 KFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQV 310 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A~~V 310 (623)
+...++++.+.++|++.|.+.... .-| ++++.+++.++. ||-.=. |.-...+..+++.| ||.|
T Consensus 242 ~~~~~la~~l~~~Gvd~i~v~~~~--~~~----~~~~~ik~~~~i----Pvi~~G----git~e~a~~~l~~g~aD~V 305 (362)
T 4ab4_A 242 ETFTYVARELGKRGIAFICSRERE--ADD----SIGPLIKEAFGG----PYIVNE----RFDKASANAALASGKADAV 305 (362)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCC--CTT----CCHHHHHHHHCS----CEEEES----SCCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCCC--CCH----HHHHHHHHHCCC----CEEEeC----CCCHHHHHHHHHcCCccEE
Confidence 678899999999999999886532 112 466777777642 332211 12356677888887 7765
No 283
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=78.91 E-value=10 Score=38.35 Aligned_cols=99 Identities=16% Similarity=0.148 Sum_probs=78.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHh
Q 006969 229 GRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA 305 (623)
Q Consensus 229 ~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~a 305 (623)
+..|.+-+.++++.+++.|++.|.++-|+|= ++++|-.++++.+.+...+ +..+ -.+|+.--++..+..|-++
T Consensus 14 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~G-vg~~~t~~ai~la~~A~~~ 89 (286)
T 2r91_A 14 GRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQ-VASLNADEAIALAKYAESR 89 (286)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEE-CCCSSHHHHHHHHHHHHHT
T ss_pred CccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEe-eCCCCHHHHHHHHHHHHhc
Confidence 4689999999999999999999999999985 7899999999999998764 3433 4688889999999999999
Q ss_pred CCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 306 GARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 306 GA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
||+.+=..---+-.. .+-++++..++
T Consensus 90 Gadavlv~~P~y~~~---~s~~~l~~~f~ 115 (286)
T 2r91_A 90 GAEAVASLPPYYFPR---LSERQIAKYFR 115 (286)
T ss_dssp TCSEEEECCSCSSTT---CCHHHHHHHHH
T ss_pred CCCEEEEcCCcCCCC---CCHHHHHHHHH
Confidence 999987765443210 24556655544
No 284
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=78.89 E-value=7.4 Score=39.42 Aligned_cols=100 Identities=10% Similarity=0.009 Sum_probs=78.5
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 006969 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (623)
Q Consensus 228 a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 304 (623)
.+..|.+-+.++++.+++.|++.|.++-|+|= ++++|-.++++.+.+...+ +..+ -.+|+.--++..+..|-+
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g---ViaG-vg~~~t~~ai~la~~A~~ 89 (288)
T 2nuw_A 14 QGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK---LIFQ-VGSLNLNDVMELVKFSNE 89 (288)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC---EEEE-CCCSCHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---eEEe-eCCCCHHHHHHHHHHHHh
Confidence 35789999999999999999999999999985 6899999999999987754 3333 467888889999999999
Q ss_pred hCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 305 AGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 305 aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
+||+.+=..---+-.+ .+-++++..++
T Consensus 90 ~Gadavlv~~P~y~~~---~s~~~l~~~f~ 116 (288)
T 2nuw_A 90 MDILGVSSHSPYYFPR---LPEKFLAKYYE 116 (288)
T ss_dssp SCCSEEEECCCCSSCS---CCHHHHHHHHH
T ss_pred cCCCEEEEcCCcCCCC---CCHHHHHHHHH
Confidence 9999987655443221 24455555444
No 285
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=78.63 E-value=29 Score=34.15 Aligned_cols=104 Identities=16% Similarity=0.161 Sum_probs=66.4
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCc-ceeEEEeec---CCcchHHHHHHHH
Q 006969 230 RSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIE-NVVISTHCQ---NDLGLSTANTIAG 302 (623)
Q Consensus 230 r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~-~v~i~~H~H---ND~GlAvANslaA 302 (623)
..+.+--..-++.+++.||+.|-+.=-+|. ..-..+.+-|..+++..++.. +++|+...- .+.-.=..-+..|
T Consensus 76 ~~~~~~K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~eei~~a~~ia 155 (231)
T 3ndo_A 76 KHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPLLADVCRVA 155 (231)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHHHHHHHHHH
Confidence 344555555667788899999988877787 355667778888887764321 344443222 0222223455788
Q ss_pred HHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 303 ACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 303 v~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
.++||+.|-+|- |.+. .|++.+|++-...+.
T Consensus 156 ~~aGADfVKTST-Gf~~-~~gAt~edv~lm~~~ 186 (231)
T 3ndo_A 156 RDAGADFVKTST-GFHP-SGGASVQAVEIMART 186 (231)
T ss_dssp HHTTCSEEECCC-SCCT-TCSCCHHHHHHHHHH
T ss_pred HHHCcCEEEcCC-CCCC-CCCCCHHHHHHHHHH
Confidence 899999998875 3321 467888887655443
No 286
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=78.57 E-value=11 Score=38.96 Aligned_cols=137 Identities=16% Similarity=0.181 Sum_probs=81.1
Q ss_pred HHHHHHHHHh-HcCCCEEEEec----CCC---ChhH-HHHHHHHHHHhccccccCCCccceEEee--c--ccchhhHHHH
Q 006969 102 EKLDIARQLA-KLGVDIIEAGF----PAA---SKED-FEAVRTIAKEVGNAVDAESGYVPVICGL--S--RCNERDIKTA 168 (623)
Q Consensus 102 ~Kl~Ia~~L~-~~Gvd~IEvGf----P~~---s~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~--~--r~~~~dI~~a 168 (623)
+-.++++.+. +.|.|+|.+|. |.+ ++++ .+.++.+.+... +| |+.- + -.+.+-++++
T Consensus 81 ~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~---------vP-lsIDg~~~~T~~~eV~eaA 150 (323)
T 4djd_D 81 EPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVG---------VP-LVVVGCGDVEKDHEVLEAV 150 (323)
T ss_dssp CHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCC---------SC-EEEECCSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCC---------ce-EEEECCCCCCCCHHHHHHH
Confidence 4788888888 99999999985 432 2223 355566555421 12 2222 1 1133445666
Q ss_pred HHHHhcCCC-CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE-cccCCCCCCHHHHHHHHHHHHHc
Q 006969 169 WEAVKYAKR-PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRSDRKFLYEILGEVIKV 246 (623)
Q Consensus 169 ~eal~~a~~-~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f-~~eda~r~d~e~l~~~~~~~~~a 246 (623)
+++. ++. +.|. +.+. + +..++...++++|.. |.. .+ .|.+++.++.+.+.++
T Consensus 151 leag--ag~~~lIN---sv~~------------~---~~~~m~~laa~~g~~-vVlmh~-----~d~~~~~~l~~~a~~~ 204 (323)
T 4djd_D 151 AEAA--AGENLLLG---NAEQ------------E---NYKSLTAACMVHKHN-IIARSP-----LDINICKQLNILINEM 204 (323)
T ss_dssp HHHT--TTSCCEEE---EEBT------------T---BCHHHHHHHHHHTCE-EEEECS-----SCHHHHHHHHHHHHTT
T ss_pred HHhc--CCCCCeEE---ECCc------------c---cHHHHHHHHHHhCCe-EEEEcc-----chHHHHHHHHHHHHHc
Confidence 6662 221 2333 3332 0 112456677788875 444 44 2578999999999999
Q ss_pred CC--cEEeecCccc-c-cCHHHHHHHHHHHHH
Q 006969 247 GA--TTLNIPDTVG-I-TMPTEFGKLIADIKA 274 (623)
Q Consensus 247 Ga--~~I~l~DTvG-~-~~P~~v~~li~~l~~ 274 (623)
|. +.|.|==.+| . ...++-.++++.++.
T Consensus 205 GI~~e~IIlDPg~g~fgk~~e~~l~~l~~ir~ 236 (323)
T 4djd_D 205 NLPLDHIVIDPSIGGLGYGIEYSFSIMERIRL 236 (323)
T ss_dssp TCCGGGEEEECCCCCTTTTHHHHHHHHHHHHH
T ss_pred CCCHHHEEEeCCCccccCCHHHHHHHHHHHHH
Confidence 98 5666522233 1 367788888888876
No 287
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=78.47 E-value=39 Score=33.03 Aligned_cols=211 Identities=13% Similarity=0.047 Sum_probs=106.4
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecc--------cchhhHH
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR--------CNERDIK 166 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r--------~~~~dI~ 166 (623)
+..++.++.++.+ .++|++.||+..+. + +.+.++.+.+.. ++......+.. ...+.++
T Consensus 28 ~~~~~~~~~l~~~---~~~G~~~vEl~~~~--~-~~~~~~~~l~~~--------gl~~~~~~~~~~~~~~~~~~~~~~~~ 93 (301)
T 3cny_A 28 GKDNNLQQLLSDI---VVAGFQGTEVGGFF--P-GPEKLNYELKLR--------NLEIAGQWFSSYIIRDGIEKASEAFE 93 (301)
T ss_dssp TTTCCHHHHHHHH---HHHTCCEECCCTTC--C-CHHHHHHHHHHT--------TCEECEEEEEECHHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHH---HHhCCCEEEecCCC--C-CHHHHHHHHHHC--------CCeEEEEeccCCCChhhHHHHHHHHH
Confidence 3457777766655 56699999997432 3 555566655543 22111111110 0123345
Q ss_pred HHHHHHhcCCCCEEEEEecCCHH--HHHHHh----CC----CHHHHHHHHHHHHHHHHHcCCCeEEEcccC-CCCCCHHH
Q 006969 167 TAWEAVKYAKRPRIHTFIATSGI--HMEHKL----RK----TKQQVVEIARSMVKFARSLGCDDVEFSPED-AGRSDRKF 235 (623)
Q Consensus 167 ~a~eal~~a~~~~v~i~~~~Sd~--h~~~~l----~~----t~ee~l~~~~~~v~~ak~~G~~~V~f~~ed-a~r~d~e~ 235 (623)
++++.....|.+.|.+....... .....+ +. ..+...+.+.++.++|++.|+. +.+-+.. ..-.+++.
T Consensus 94 ~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~lE~~~~~~~~~~~~ 172 (301)
T 3cny_A 94 KHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLK-VAYHHHMGTGIQTKEE 172 (301)
T ss_dssp HHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCE-EEEECCTTSSSCSHHH
T ss_pred HHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCE-EEEecCCCcccCCHHH
Confidence 66666677799988765310000 000000 00 1245566777888889999974 5553322 22346676
Q ss_pred HHHHHHHHHHcCCcEEeec-CcccccCHH-HHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH-------HHHHhC
Q 006969 236 LYEILGEVIKVGATTLNIP-DTVGITMPT-EFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI-------AGACAG 306 (623)
Q Consensus 236 l~~~~~~~~~aGa~~I~l~-DTvG~~~P~-~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl-------aAv~aG 306 (623)
+.++++. .+...+.++ ||.=...-. ...+.++.+.. -...+|.||..+-...+.. .+...+
T Consensus 173 ~~~l~~~---~~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~-------~i~~vHl~D~~~~~~~~~~~~~~~~~~~~~~~ 242 (301)
T 3cny_A 173 TDRLMAN---TDPKLVGLLYDTGHIAVSDGDYMALLNAHID-------RVVHVHFKDVRRSKEEECRAKGLTFQGSFLNG 242 (301)
T ss_dssp HHHHHHT---SCTTTCEEEEEHHHHHHHHSCSHHHHHHHGG-------GEEEEEECEECHHHHHHHHHHTCCHHHHHHTT
T ss_pred HHHHHHh---CCccceeEEechHHHHHcCCCHHHHHHHHHh-------heeEEEeecCCcchhhhhhhcccchhhHhhcC
Confidence 6666654 343323322 553221110 12223333332 2468899987654221110 001111
Q ss_pred CCEEEeccCCccCccCcccHHHHHHHHHhccc
Q 006969 307 ARQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (623)
Q Consensus 307 A~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~ 338 (623)
.+ .-+|+ |..+..+++..|+..+.
T Consensus 243 -~~-----~~~G~--G~id~~~i~~~L~~~gy 266 (301)
T 3cny_A 243 -MF-----TVPGD--GDLDFKPVYDKLIANNY 266 (301)
T ss_dssp -CE-----ECTTT--SSCCCHHHHHHHHHTTC
T ss_pred -cc-----ccCCC--CCccHHHHHHHHHhcCC
Confidence 11 12344 88999999999997653
No 288
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=78.43 E-value=32 Score=33.45 Aligned_cols=123 Identities=14% Similarity=0.079 Sum_probs=65.0
Q ss_pred hHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCe--EEE-ccc--CCCCCC------
Q 006969 164 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD--VEF-SPE--DAGRSD------ 232 (623)
Q Consensus 164 dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~--V~f-~~e--da~r~d------ 232 (623)
+++..++.++..|.+.|.++.... +.-..-..+. +.+.+..+.++++|++. +.. .+. +-...+
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~~--~~~~~~~~~~----~~~~~~~~~l~~~gl~~~~~~~h~~~~~~~~~~~~~~r~~ 86 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHNA--RSWSAKLPSD----EAATKFKREMKKHGIDWENAFCHSGYLINLASPKDDIWQK 86 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCCC--SSSCCCCCCH----HHHHHHHHHHHHHTCCGGGEEEECCTTCCTTCSSHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCc--ccccccCCCH----HHHHHHHHHHHHcCCCcceeEEecccccccCCCCHHHHHH
Confidence 455556666677999998864211 0000001122 23445566778888862 222 232 111223
Q ss_pred -HHHHHHHHHHHHHcCCcEEeecCc--ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCc
Q 006969 233 -RKFLYEILGEVIKVGATTLNIPDT--VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDL 292 (623)
Q Consensus 233 -~e~l~~~~~~~~~aGa~~I~l~DT--vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~ 292 (623)
.+++.+.++.+.+.|+..|.+.-. .+......+..+++.+++......++.|.+|.|+..
T Consensus 87 ~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~~ 149 (287)
T 2x7v_A 87 SVELLKKEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQK 149 (287)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCCC
Confidence 257778888888999998877311 111122334445555544322212578999999743
No 289
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=78.35 E-value=33 Score=37.43 Aligned_cols=132 Identities=14% Similarity=0.089 Sum_probs=76.7
Q ss_pred HHHHHHHHHHhHcCCCEEEEecCC-CChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCCE
Q 006969 101 KEKLDIARQLAKLGVDIIEAGFPA-ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPR 179 (623)
Q Consensus 101 e~Kl~Ia~~L~~~Gvd~IEvGfP~-~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~ 179 (623)
++-.+.++.|.++|+|.|++.... .++.-.+.++.+.+..++ .+.+.+.. ...++.+.+.++ |++.
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~--------~~Vi~g~v-~t~e~a~~l~~a----GaD~ 296 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPH--------LEIIGGNV-ATAEGARALIEA----GVSA 296 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTT--------CCEEEEEE-CSHHHHHHHHHH----TCSE
T ss_pred cchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCC--------ceEEEccc-CcHHHHHHHHHh----CCCE
Confidence 344677889999999999998642 233345788888775422 13444322 244555555554 8998
Q ss_pred EEEE-ecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 006969 180 IHTF-IATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 254 (623)
Q Consensus 180 v~i~-~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~ 254 (623)
|.+- .+.+...-+...+.... .+..+.+.++.+++.++. |.- +++=.+++.+.+. ..+||+.+.+.
T Consensus 297 I~Vg~g~Gs~~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iP-VIa---~GGI~~~~di~ka----la~GAd~V~iG 363 (496)
T 4fxs_A 297 VKVGIGPGSICTTRIVTGVGVP-QITAIADAAGVANEYGIP-VIA---DGGIRFSGDISKA----IAAGASCVMVG 363 (496)
T ss_dssp EEECSSCCTTBCHHHHHCCCCC-HHHHHHHHHHHHGGGTCC-EEE---ESCCCSHHHHHHH----HHTTCSEEEES
T ss_pred EEECCCCCcCcccccccCCCcc-HHHHHHHHHHHhccCCCe-EEE---eCCCCCHHHHHHH----HHcCCCeEEec
Confidence 8763 22222111122222111 245566777777777765 432 4556666666544 35799988765
No 290
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=78.23 E-value=33 Score=36.90 Aligned_cols=200 Identities=17% Similarity=0.112 Sum_probs=122.8
Q ss_pred hHHHHHHHHhcCCCCEEEEEecCCH----HHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC----------
Q 006969 164 DIKTAWEAVKYAKRPRIHTFIATSG----IHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG---------- 229 (623)
Q Consensus 164 dI~~a~eal~~a~~~~v~i~~~~Sd----~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~---------- 229 (623)
.+-+.++.+..+|+..|||-..+.. -|+..+-=.+.+|.++++..+...++..|.+.|...=-|+-
T Consensus 168 ~v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~~d 247 (439)
T 3i4e_A 168 NAFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITSDID 247 (439)
T ss_dssp HHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCC
T ss_pred HHHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCcccccccccccc
Confidence 4545555566679999999877642 13221112478999999988877777777653322111220
Q ss_pred -------------------CCCHHHHHHHHHHHHHcCCcEEee-cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeec
Q 006969 230 -------------------RSDRKFLYEILGEVIKVGATTLNI-PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQ 289 (623)
Q Consensus 230 -------------------r~d~e~l~~~~~~~~~aGa~~I~l-~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~H 289 (623)
+...+..++=+++..+ |||.|.+ + |.-.++++.++.+.++..+|. ..+.+-+-
T Consensus 248 ~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~---~~~~~eei~~f~~~v~~~~P~---~~l~~~~s 320 (439)
T 3i4e_A 248 DNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCET---GKPDLEYAKKFAEAIHKQFPG---KLLSYNCS 320 (439)
T ss_dssp TTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECC---SSCCHHHHHHHHHHHHHHSTT---CEEEEECC
T ss_pred cccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecC---CCCCHHHHHHHHHHhcccCCc---eEEeeCCC
Confidence 2346666666666666 9999987 3 457899999999999988874 23433222
Q ss_pred CCcc----hH---HHH-HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHH
Q 006969 290 NDLG----LS---TAN-TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVE 361 (623)
Q Consensus 290 ND~G----lA---vAN-slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~ 361 (623)
-.+. +. +++ .-.--+.|+.++=.++.| =|+-|.++.+++..+...| ... ... ..--.+-.
T Consensus 321 Psfnw~~~~~~~~~~~f~~eL~~lGv~~v~~~la~--~raa~~A~~~~a~~i~~~G------m~a---yve-~Q~~e~~~ 388 (439)
T 3i4e_A 321 PSFNWKKNLDDATIAKFQKELGAMGYKFQFITLAG--FHALNYSMFNLAHGYARTQ------MSA---FVE-LQQAEFAA 388 (439)
T ss_dssp SSSCHHHHSCHHHHHTHHHHHHHHTCCEEEETTHH--HHHHHHHHHHHHHHHHHHT------HHH---HHH-HHHHHHHH
T ss_pred CCCcCcccCCHHHHHHHHHHHHHcCCeEEEeChHH--HHHHHHHHHHHHHHHHHhC------CHH---HHH-HHHHhhhh
Confidence 1121 11 111 123335799999766655 4788888999888887643 111 111 11112224
Q ss_pred HHhCCCCCCCCcccCcchhhc
Q 006969 362 EYTGLHVQPHKAIVGANAFAH 382 (623)
Q Consensus 362 ~~~g~~i~~~~pivG~~aF~h 382 (623)
+-.|+..-.|+-.+|.+-|-.
T Consensus 389 ~~~g~~~~~hq~~~G~~y~d~ 409 (439)
T 3i4e_A 389 ADKGFTAVKHQREVGTGYFDA 409 (439)
T ss_dssp TTTTCCTTSHHHHTTHHHHHH
T ss_pred hhcCcceeecccccccchHHH
Confidence 567888888888888877644
No 291
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=78.21 E-value=7 Score=40.24 Aligned_cols=71 Identities=15% Similarity=0.193 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCcc-----------cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHH
Q 006969 231 SDRKFLYEILGEVIKVGATTLNIPDTV-----------GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 299 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~aGa~~I~l~DTv-----------G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANs 299 (623)
.+++.+.+.++...+.|++.|.+.-+- -..+|+++.++++..++. ++++.+|+|.+.+ .
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~-----g~~v~~H~~~~~~-----i 233 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMA-----GIKVAAHAHGASG-----I 233 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHT-----TCEEEEEECSHHH-----H
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHC-----CCEEEEEeCCHHH-----H
Confidence 345666667777777777766665432 247889999999998874 2679999988753 4
Q ss_pred HHHHHhCCCEEE
Q 006969 300 IAGACAGARQVE 311 (623)
Q Consensus 300 laAv~aGA~~Vd 311 (623)
..++++|++.|+
T Consensus 234 ~~~~~~g~~~i~ 245 (403)
T 3gnh_A 234 REAVRAGVDTIE 245 (403)
T ss_dssp HHHHHTTCSEEE
T ss_pred HHHHHhCCCEEe
Confidence 567788998764
No 292
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=77.98 E-value=7.3 Score=40.86 Aligned_cols=90 Identities=17% Similarity=0.240 Sum_probs=68.7
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCC
Q 006969 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGA 307 (623)
Q Consensus 228 a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA 307 (623)
....|.+-.++-++++.++|++.|.++ +-. .+-.+.+..+++..+ +||..-.|-|.-+|++ |+++|+
T Consensus 40 t~T~D~~atv~Qi~~l~~aG~diVRva----vp~-~~~a~al~~I~~~~~----vPlvaDiHf~~~lal~----a~e~G~ 106 (366)
T 3noy_A 40 TKTHDVEATLNQIKRLYEAGCEIVRVA----VPH-KEDVEALEEIVKKSP----MPVIADIHFAPSYAFL----SMEKGV 106 (366)
T ss_dssp SCTTCHHHHHHHHHHHHHTTCCEEEEE----CCS-HHHHHHHHHHHHHCS----SCEEEECCSCHHHHHH----HHHTTC
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeC----CCC-hHHHHHHHHHHhcCC----CCEEEeCCCCHHHHHH----HHHhCC
Confidence 334688889999999999999998872 222 345788999999874 7899989999888766 899999
Q ss_pred CEEEeccCCccCccCcc----cHHHHHHHHHhcc
Q 006969 308 RQVEVTINGIGERAGNA----SLEEVVMAFKCRG 337 (623)
Q Consensus 308 ~~Vd~Tv~GlGERaGNa----~lEevv~~L~~~~ 337 (623)
+. ..||. ||. ..++|+...+.++
T Consensus 107 dk--lRINP-----GNig~~~~~~~vv~~ak~~~ 133 (366)
T 3noy_A 107 HG--IRINP-----GNIGKEEIVREIVEEAKRRG 133 (366)
T ss_dssp SE--EEECH-----HHHSCHHHHHHHHHHHHHHT
T ss_pred Ce--EEECC-----cccCchhHHHHHHHHHHHcC
Confidence 98 56664 666 3567777777654
No 293
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=77.96 E-value=13 Score=38.43 Aligned_cols=205 Identities=14% Similarity=0.014 Sum_probs=115.6
Q ss_pred HHHHhHcCCCEEEEec----------CCCCh----hHHHHHHHHHHHhccccccCCCccceEEe----ecccchhhHHHH
Q 006969 107 ARQLAKLGVDIIEAGF----------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKTA 168 (623)
Q Consensus 107 a~~L~~~Gvd~IEvGf----------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~a 168 (623)
++.++++|||.|=+|. |...+ +-.+.++.|++..++ .|.+.. |+ ....+-+.
T Consensus 52 A~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~--------~PviaD~d~Gyg--~~~~v~~t 121 (318)
T 1zlp_A 52 AAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPN--------LCVVVDGDTGGG--GPLNVQRF 121 (318)
T ss_dssp HHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSS--------SEEEEECTTCSS--SHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccC--------CCEEEeCCCCCC--CHHHHHHH
Confidence 6777889999998863 32222 224566667664322 133332 33 44455555
Q ss_pred HHHHhcCCCCEEEEEecCCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC-CCCHHHHHHHHHHHH
Q 006969 169 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVI 244 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~Sd~---h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~-r~d~e~l~~~~~~~~ 244 (623)
...+..+|+..|+|-...++- |+.-+-=.+.++..++++.+++....-++. |.--. |+. ....+.+++=+++..
T Consensus 122 v~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~-I~ARt-da~a~~gl~~ai~Ra~Ay~ 199 (318)
T 1zlp_A 122 IRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFF-LVART-DARAPHGLEEGIRRANLYK 199 (318)
T ss_dssp HHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCE-EEEEE-CTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcE-EEEee-HHhhhcCHHHHHHHHHHHH
Confidence 555556899999998776421 111000035677777777666655443331 22111 111 112356777788889
Q ss_pred HcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcch-HHHHHHHHHHhCCCEEEeccCCccCccCc
Q 006969 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAGACAGARQVEVTINGIGERAGN 323 (623)
Q Consensus 245 ~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl-AvANslaAv~aGA~~Vd~Tv~GlGERaGN 323 (623)
++|||.|.+. |.-.++++.++.+. ++ +|+-+-+-. +|. ..-..-.--+.|+++|-....++ |+-+
T Consensus 200 eAGAd~i~~e---~~~~~e~~~~i~~~----l~----~P~lan~~~-~g~~~~~~~~eL~~lGv~~v~~~~~~~--raa~ 265 (318)
T 1zlp_A 200 EAGADATFVE---APANVDELKEVSAK----TK----GLRIANMIE-GGKTPLHTPEEFKEMGFHLIAHSLTAV--YATA 265 (318)
T ss_dssp HTTCSEEEEC---CCCSHHHHHHHHHH----SC----SEEEEEECT-TSSSCCCCHHHHHHHTCCEEEECSHHH--HHHH
T ss_pred HcCCCEEEEc---CCCCHHHHHHHHHh----cC----CCEEEEecc-CCCCCCCCHHHHHHcCCeEEEEchHHH--HHHH
Confidence 9999999986 33455666555554 43 345332221 110 01113355567999986555443 7788
Q ss_pred ccHHHHHHHHHhcc
Q 006969 324 ASLEEVVMAFKCRG 337 (623)
Q Consensus 324 a~lEevv~~L~~~~ 337 (623)
..+++++..|...|
T Consensus 266 ~a~~~~~~~l~~~g 279 (318)
T 1zlp_A 266 RALVNIMKILKEKG 279 (318)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcC
Confidence 88888888887755
No 294
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=77.94 E-value=7.6 Score=39.47 Aligned_cols=100 Identities=17% Similarity=0.085 Sum_probs=78.7
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 006969 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (623)
Q Consensus 228 a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~ 304 (623)
.+..|.+-+.++++.+++.|++.|.++-|+|= ++++|-.++++.+.+...+ +..+ -.+|+.--++..+..|-+
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g---viaG-vg~~~t~~ai~la~~A~~ 89 (293)
T 1w3i_A 14 DNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK---IIFQ-VGGLNLDDAIRLAKLSKD 89 (293)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC---EEEE-CCCSCHHHHHHHHHHGGG
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC---EEEe-cCCCCHHHHHHHHHHHHh
Confidence 35789999999999999999999999999885 6899999999999988754 3333 468888889999999999
Q ss_pred hCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 305 AGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 305 aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
+||+.+=..---+-.+ .+-++++..++
T Consensus 90 ~Gadavlv~~P~y~~~---~s~~~l~~~f~ 116 (293)
T 1w3i_A 90 FDIVGIASYAPYYYPR---MSEKHLVKYFK 116 (293)
T ss_dssp SCCSEEEEECCCSCSS---CCHHHHHHHHH
T ss_pred cCCCEEEEcCCCCCCC---CCHHHHHHHHH
Confidence 9999987655443221 24455555444
No 295
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=77.93 E-value=9.2 Score=40.08 Aligned_cols=131 Identities=11% Similarity=0.048 Sum_probs=83.7
Q ss_pred HhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC---eEEEcccCCCC---CCHH
Q 006969 172 VKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD---DVEFSPEDAGR---SDRK 234 (623)
Q Consensus 172 l~~a~~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~---~V~f~~eda~r---~d~e 234 (623)
.+.+|.+.|.|-.+- |+. ++...+|-|.+.-.+.+.+.|+.+|+. |-+ .|.+++.|... .+.+
T Consensus 167 a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~ 246 (363)
T 3l5l_A 167 ARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLE 246 (363)
T ss_dssp HHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHH
T ss_pred HHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHH
Confidence 455799998887653 221 233456667887788888889888876 322 24567754321 4567
Q ss_pred HHHHHHHHHHHcCCcEEeecCcc--cc----cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcch-HHHHHHHHHHhC-
Q 006969 235 FLYEILGEVIKVGATTLNIPDTV--GI----TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAGACAG- 306 (623)
Q Consensus 235 ~l~~~~~~~~~aGa~~I~l~DTv--G~----~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl-AvANslaAv~aG- 306 (623)
...++++.+.++|++.|.+.... .. ..|....++++.+++.+. +||..= -|. -...+..+++.|
T Consensus 247 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~----iPVi~~----GgI~s~e~a~~~l~~G~ 318 (363)
T 3l5l_A 247 ESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAK----LPVTSA----WGFGTPQLAEAALQANQ 318 (363)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT----CCEEEC----SSTTSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcC----CcEEEe----CCCCCHHHHHHHHHCCC
Confidence 88899999999999999887521 11 113223456777777763 344431 122 256777889998
Q ss_pred CCEE
Q 006969 307 ARQV 310 (623)
Q Consensus 307 A~~V 310 (623)
|+.|
T Consensus 319 aD~V 322 (363)
T 3l5l_A 319 LDLV 322 (363)
T ss_dssp CSEE
T ss_pred ccEE
Confidence 8876
No 296
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=77.89 E-value=25 Score=35.87 Aligned_cols=19 Identities=11% Similarity=0.029 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHcCCcEE
Q 006969 233 RKFLYEILGEVIKVGATTL 251 (623)
Q Consensus 233 ~e~l~~~~~~~~~aGa~~I 251 (623)
.+..+++++.+.++|||.+
T Consensus 89 t~~ai~la~~A~~~Gadav 107 (309)
T 3fkr_A 89 TQVCAARSLRAQQLGAAMV 107 (309)
T ss_dssp HHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHcCCCEE
Confidence 3344444444444444443
No 297
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=77.89 E-value=21 Score=36.98 Aligned_cols=34 Identities=21% Similarity=0.146 Sum_probs=18.5
Q ss_pred CCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE
Q 006969 186 TSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF 223 (623)
Q Consensus 186 ~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f 223 (623)
.-|-+......++.++.++.+.. +-+.|++.+++
T Consensus 16 lRDG~Q~~~~~~~~e~k~~i~~~----L~~~Gvd~IEv 49 (345)
T 1nvm_A 16 LRDGSHAIRHQYTLDDVRAIARA----LDKAKVDSIEV 49 (345)
T ss_dssp TTHHHHHTTTCCCHHHHHHHHHH----HHHHTCSEEEC
T ss_pred CCcccCCCCCCCCHHHHHHHHHH----HHHcCCCEEEE
Confidence 34444444455676665554433 33457776776
No 298
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=77.88 E-value=16 Score=36.78 Aligned_cols=137 Identities=16% Similarity=0.175 Sum_probs=80.1
Q ss_pred HHHHHHhHcCCCEEEEec---------CCCCh----hHHHHHHHHHHHhccccccCCCccceEEeecc--c-chhh-HHH
Q 006969 105 DIARQLAKLGVDIIEAGF---------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICGLSR--C-NERD-IKT 167 (623)
Q Consensus 105 ~Ia~~L~~~Gvd~IEvGf---------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r--~-~~~d-I~~ 167 (623)
.-|+.++++|||.|=+|. |...+ +....++.+++-.... +.++.+.- . +.++ ++.
T Consensus 28 ~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~--------~vvaD~pfgsy~~~~~a~~~ 99 (264)
T 1m3u_A 28 SFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNC--------LLLADLPFMAYATPEQAFEN 99 (264)
T ss_dssp HHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTS--------EEEEECCTTSSSSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCC--------cEEEECCCCCcCCHHHHHHH
Confidence 347888999999999983 32222 2234556666543221 22333222 1 2222 333
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE----EcccC---------CCCCC--
Q 006969 168 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE----FSPED---------AGRSD-- 232 (623)
Q Consensus 168 a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~----f~~ed---------a~r~d-- 232 (623)
+.+.++ +|+..|++-.. +.+.+.|+.+.+.|+. |+ +.|.+ -+|++
T Consensus 100 a~rl~k-aGa~aVklEgg------------------~e~~~~I~al~~agip-V~gHiGLtPq~v~~~ggf~v~grt~~~ 159 (264)
T 1m3u_A 100 AATVMR-AGANMVKIEGG------------------EWLVETVQMLTERAVP-VCGHLGLTPQSVNIFGGYKVQGRGDEA 159 (264)
T ss_dssp HHHHHH-TTCSEEECCCS------------------GGGHHHHHHHHHTTCC-EEEEEESCGGGHHHHTSSCCCCCSHHH
T ss_pred HHHHHH-cCCCEEEECCc------------------HHHHHHHHHHHHCCCC-eEeeecCCceeecccCCeEEEeCCHHH
Confidence 334455 89999987554 1234567777888876 54 22221 23554
Q ss_pred HHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCC
Q 006969 233 RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP 277 (623)
Q Consensus 233 ~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~ 277 (623)
.+.+++=++++.++||+.|.+.= .|. ++.+.+.+.++
T Consensus 160 a~~~i~rA~a~~eAGA~~ivlE~-----vp~---~~a~~it~~l~ 196 (264)
T 1m3u_A 160 GDQLLSDALALEAAGAQLLVLEC-----VPV---ELAKRITEALA 196 (264)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEES-----CCH---HHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHCCCcEEEEec-----CCH---HHHHHHHHhCC
Confidence 36777888889999999999853 354 34556666664
No 299
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=77.66 E-value=3.8 Score=42.49 Aligned_cols=71 Identities=15% Similarity=0.229 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHH----HHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC
Q 006969 234 KFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLI----ADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG 306 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li----~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG 306 (623)
+++.+.+++.+++||+.|.+.|+.|. +.|+.+.+++ +.+.+.+. ++++ +|+.-+.+.-+ -.-.+.|
T Consensus 190 ~~~~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~---~~~i-ih~~g~~~~~l---~~~~~~g 262 (348)
T 4ay7_A 190 EASIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVN---SVTV-LHICGNVNPIL---SDMADCG 262 (348)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSS---SEEE-EECCSCCHHHH---HHHHTSC
T ss_pred HHHHHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhcc---CCcE-EEecCCcHHHH---HHHHHhc
Confidence 45566677788899999999999875 8999988865 44444554 3443 67764433211 1223568
Q ss_pred CCEEE
Q 006969 307 ARQVE 311 (623)
Q Consensus 307 A~~Vd 311 (623)
++.+.
T Consensus 263 ~d~i~ 267 (348)
T 4ay7_A 263 FEGLS 267 (348)
T ss_dssp CSEEE
T ss_pred ccccc
Confidence 88764
No 300
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=77.58 E-value=17 Score=38.25 Aligned_cols=68 Identities=21% Similarity=0.130 Sum_probs=49.5
Q ss_pred HHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 236 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 236 l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
..+.++.++++|++.|.| ||... .|..+.+.|+.+++.+|+ +++.... ..-..-+..++++||+.|.+
T Consensus 109 ~~~~~~~lieaGvd~I~i-dta~G-~~~~~~~~I~~ik~~~p~---v~Vi~G~----v~t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLI-DSSHG-HSEGVLQRIRETRAAYPH---LEIIGGN----VATAEGARALIEAGVSAVKV 176 (366)
T ss_dssp CHHHHHHHHHTTCSEEEE-ECSCT-TSHHHHHHHHHHHHHCTT---CEEEEEE----ECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhCCCCEEEE-eCCCC-CCHHHHHHHHHHHHhcCC---CceEeee----eCCHHHHHHHHHcCCCEEEE
Confidence 346678888999998876 45433 466788899999999875 4554421 12355678899999999997
No 301
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=77.56 E-value=6.9 Score=41.05 Aligned_cols=96 Identities=16% Similarity=0.178 Sum_probs=67.1
Q ss_pred HHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEee--cCcccccCHHHHHH--HHHHHHHhCCCCcceeE
Q 006969 209 MVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI--PDTVGITMPTEFGK--LIADIKANTPGIENVVI 284 (623)
Q Consensus 209 ~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l--~DTvG~~~P~~v~~--li~~l~~~~~~~~~v~i 284 (623)
.++++.+.|.. |..+- +-++.+.+...++.+.+.|.+ |.| | |.++-+|.+-.. .|..|++.+|+ ++|
T Consensus 127 LL~~va~~gKP-viLst---Gmstl~Ei~~Ave~i~~~g~~-viLlhC-~s~YPt~~~~~nL~aI~~Lk~~fp~---lpV 197 (350)
T 3g8r_A 127 LLERIARSDKP-VVAST---AGARREDIDKVVSFMLHRGKD-LTIMHC-VAEYPTPDDHLHLARIKTLRQQYAG---VRI 197 (350)
T ss_dssp HHHHHHTSCSC-EEEEC---TTCCHHHHHHHHHHHHTTTCC-EEEEEC-CCCSSCCGGGCCTTHHHHHHHHCTT---SEE
T ss_pred HHHHHHhhCCc-EEEEC---CCCCHHHHHHHHHHHHHcCCC-EEEEec-CCCCCCCcccCCHHHHHHHHHHCCC---CCE
Confidence 55666667876 77764 235888888888888888875 566 6 456766655444 47889999974 678
Q ss_pred EEeecCCcchHHHHHHHHHHhCCCEEEecc
Q 006969 285 STHCQNDLGLSTANTIAGACAGARQVEVTI 314 (623)
Q Consensus 285 ~~H~HND~GlAvANslaAv~aGA~~Vd~Tv 314 (623)
++=-|-.-+ ..+-+++|+.+||+.|+.=+
T Consensus 198 G~SdHt~g~-~~~~~~AAvAlGA~vIEkH~ 226 (350)
T 3g8r_A 198 GYSTHEDPD-LMEPIMLAVAQGATVFEKHV 226 (350)
T ss_dssp EEEECCCSS-CCHHHHHHHHTTCCEEEEEB
T ss_pred EcCCCCCCC-ccHHHHHHHHcCCCEEEEec
Confidence 887776522 23456899999999986633
No 302
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=77.43 E-value=28 Score=34.05 Aligned_cols=202 Identities=9% Similarity=-0.007 Sum_probs=109.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChh-HHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 175 (623)
.|-.+-...+-+.+.+.|++.+-.......++ +.+.++.+... .++ + |.... .........++.+...
T Consensus 17 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~---~vd---g----iIi~~-~~~~~~~~~~~~~~~~ 85 (305)
T 3g1w_A 17 DYWKRCLKGFEDAAQALNVTVEYRGAAQYDIQEQITVLEQAIAK---NPA---G----IAISA-IDPVELTDTINKAVDA 85 (305)
T ss_dssp THHHHHHHHHHHHHHHHTCEEEEEECSSSCHHHHHHHHHHHHHH---CCS---E----EEECC-SSTTTTHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHh---CCC---E----EEEcC-CCHHHHHHHHHHHHHC
Confidence 45566667788888899998776443333333 34556665543 111 1 21111 1223334445555667
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 253 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~--G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l 253 (623)
+++.|.+-....+.......+.+. .+....+++++.+. |...|.|-.........+.+.-+.+++.+.|.+.-..
T Consensus 86 ~iPvV~~~~~~~~~~~~~~V~~d~---~~~g~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~R~~gf~~~l~~~~~~~~~~ 162 (305)
T 3g1w_A 86 GIPIVLFDSGAPDSHAHSFLGTNN---YNAGMNAAYKMAELLDGEGEVAVITLPNQLNHQERTTGFKETLEAEFPAIEVI 162 (305)
T ss_dssp TCCEEEESSCCTTSCCSCEEECCH---HHHHHHHHHHHHHHTTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred CCcEEEECCCCCCCceeEEECcCH---HHHHHHHHHHHHHHhCCCcEEEEEeCCCcccHHHHHHHHHHHHHhhCCCCEEE
Confidence 899876643322100001122333 34566777888888 8766655221222233355555666777777643211
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCcc
Q 006969 254 PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (623)
Q Consensus 254 ~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlG 318 (623)
.--.|...+....+.+..+.+..|+ +-.+=|.||.. |+.-..+.-++|.+ =|.+|.|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~~~~~----~~ai~~~~d~~-a~g~~~al~~~g~~-~di~vig~d 221 (305)
T 3g1w_A 163 AVEDGRGDSLHSRRVAHQLLEDYPN----LAGIFATEANG-GVGVGDAVRLESRA-GEIQIISFD 221 (305)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHCTT----EEEEEESSHHH-HHHHHHHHHHTTCT-TTSEEEEES
T ss_pred EEecCCCCHHHHHHHHHHHHHhCCC----ceEEEECCCcc-hhhHHHHHHhcCCC-CCeEEEEeC
Confidence 1123445788888888777766664 23555777643 34444445567876 456787765
No 303
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=77.25 E-value=55 Score=35.30 Aligned_cols=157 Identities=15% Similarity=0.114 Sum_probs=86.6
Q ss_pred CCEEEEecCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHH
Q 006969 115 VDIIEAGFPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEH 193 (623)
Q Consensus 115 vd~IEvGfP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~ 193 (623)
+|.|-+++-...|+.+ ..++.+.+... +| ++.. .+.+-++.++++..+ +.+.| .+.+.
T Consensus 128 aD~I~l~~~~~dpe~~~~~Vk~V~e~~d---------vP-lsID--~dp~vleaale~~~d-~~pLI---ns~t~----- 186 (445)
T 2h9a_A 128 VNLVALKGSSQDAATFAKAVATAREVTD---------LP-FILI--GTPEQLAAALETEGA-NNPLL---YAATA----- 186 (445)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHHCC---------SC-EEEE--SCHHHHHHHHHHHGG-GCCEE---EEECT-----
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHhcC---------CC-EEEE--CCHHHHHHHHHhcCC-CCCEE---EECCH-----
Confidence 9999999944445443 33444444321 13 2222 677888888887542 22333 33332
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHH
Q 006969 194 KLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIK 273 (623)
Q Consensus 194 ~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~ 273 (623)
+ +..++...+++.|.. |...+. +.+.+.++.+.+.++|.+.|.| |..... -.+..+-+..+|
T Consensus 187 -------e---n~~~~~~la~~y~~~-vV~~~~-----~l~~l~~lv~~a~~~Gi~~IiL-DP~~~~-~~~sl~~~~~IR 248 (445)
T 2h9a_A 187 -------D---NYEQMVELAKKYNVP-LTVSAK-----GLDALAELVQKITALGYKNLIL-DPQPEN-ISEGLFYQTQIR 248 (445)
T ss_dssp -------T---THHHHHHHHHHHTCC-EEEECS-----SHHHHHHHHHHHHHTTCCCEEE-ECCCSS-HHHHHHHHHHHH
T ss_pred -------H---HHHHHHHHHHHhCCe-EEEEcC-----CHHHHHHHHHHHHHCCCCcEEE-cCCchh-HHHHHHHHHHHH
Confidence 1 234566777888886 444332 6889999999999999987765 544322 223333455555
Q ss_pred HhC---CCCc-ce-eEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 274 ANT---PGIE-NV-VISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 274 ~~~---~~~~-~v-~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
+.. +... .. .|+.-+.-|--+...-+..+++.||+.|
T Consensus 249 ~~al~~~d~~lg~P~i~~vs~~d~~~ea~lA~~~~~~GasIl 290 (445)
T 2h9a_A 249 RLAIKKLFRPFGYPTIAFALDENPYQAVMEASVYIAKYAGII 290 (445)
T ss_dssp HHHHHSCCGGGCSCBEEECCCSSHHHHHHHHHHHHHTTCSEE
T ss_pred HhhhcCCCcccCCCeeecCCchhHHHHHHHHHHHHHcCCeEE
Confidence 431 1100 01 2333333232255555555577788776
No 304
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=77.20 E-value=43 Score=32.92 Aligned_cols=198 Identities=11% Similarity=0.029 Sum_probs=100.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCC-CChh-HHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcC
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPA-ASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~-~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 175 (623)
|-.+-...+-+.+.+.|++.+-. .+. .++. +.+.++.+... .++ .|.... .....+...++.+...
T Consensus 14 ~~~~~~~gi~~~~~~~g~~~~~~-~~~~~~~~~~~~~i~~l~~~---~vd-------giIi~~-~~~~~~~~~~~~~~~~ 81 (313)
T 2h3h_A 14 YWSQVEQGVKAAGKALGVDTKFF-VPQKEDINAQLQMLESFIAE---GVN-------GIAIAP-SDPTAVIPTIKKALEM 81 (313)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEE-CCSSSCHHHHHHHHHHHHHT---TCS-------EEEECC-SSTTTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCEEEEE-CCCCCCHHHHHHHHHHHHHc---CCC-------EEEEeC-CChHHHHHHHHHHHHC
Confidence 44455666777788899875433 332 2332 23455555432 111 122111 1223333344445556
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEE-cccCCCCCCHHHHHHHHHHHHHcCCcEEe
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGATTLN 252 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~--G~~~V~f-~~eda~r~d~e~l~~~~~~~~~aGa~~I~ 252 (623)
+++.|.+-....+.......+.+. .+....+++++.+. |...|.| ..........+.+.-+.+++.+.|...+.
T Consensus 82 ~iPvV~~~~~~~~~~~~~~V~~d~---~~~g~~a~~~L~~~~~G~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~ 158 (313)
T 2h3h_A 82 GIPVVTLDTDSPDSGRYVYIGTDN---YQAGYTAGLIMKELLGGKGKVVIGTGSLTAMNSLQRIQGFKDAIKDSEIEIVD 158 (313)
T ss_dssp TCCEEEESSCCTTSCCSCEEECCH---HHHHHHHHHHHHHHHTSCSEEEEEESCSSCHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCeEEEeCCCCCCcceeEEECcCH---HHHHHHHHHHHHHHcCCCCEEEEEECCCCCccHHHHHHHHHHHhcCCCCEEEE
Confidence 888876533221100000122332 34455677777776 7766655 22112222234555556666667765443
Q ss_pred ecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCcc
Q 006969 253 IPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (623)
Q Consensus 253 l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlG 318 (623)
.. .+-..+....+.+..+.+..|+.+ .+=|.||. +|+.-..+.-++|.. =|.+|.|++
T Consensus 159 ~~--~~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d~-~a~g~~~al~~~G~p-~dv~vvg~d 216 (313)
T 2h3h_A 159 IL--NDEEDGARAVSLAEAALNAHPDLD----AFFGVYAY-NGPAQALVVKNAGKV-GKVKIVCFD 216 (313)
T ss_dssp EE--ECSSCHHHHHHHHHHHHHHCTTCC----EEEECSTT-HHHHHHHHHHHTTCT-TTSEEEEEC
T ss_pred ee--cCCCCHHHHHHHHHHHHHHCcCce----EEEEcCCC-ccHHHHHHHHHcCCC-CCeEEEEeC
Confidence 21 234567777788877776666432 44577775 555544444567731 156777765
No 305
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=77.07 E-value=18 Score=37.18 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=67.0
Q ss_pred CCCHHHHHHHHHHHhHcCCC--EEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecc-cchhhHHHHHHHHh
Q 006969 97 TLTSKEKLDIARQLAKLGVD--IIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVK 173 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd--~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~ 173 (623)
.++.++-+++++.|.+.|++ .||=-+| +.|++..+++.+... +| |++=.+ ....+++..++.
T Consensus 192 ~~~~~~a~~~~~~l~~~~i~~~~iE~P~~---~~~~~~~~~l~~~~~---------ip-ia~dE~~~~~~~~~~~i~~-- 256 (345)
T 2zad_A 192 GYTQKEAVEFARAVYQKGIDIAVYEQPVR---REDIEGLKFVRFHSP---------FP-VAADESARTKFDVMRLVKE-- 256 (345)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCSEEECCSC---TTCHHHHHHHHHHSS---------SC-EEESTTCCSHHHHHHHHHH--
T ss_pred CCCHHHHHHHHHHHHhcCCCeeeeeCCCC---cccHHHHHHHHHhCC---------CC-EEEeCCcCCHHHHHHHHHh--
Confidence 46899999999999999999 9996554 467788888877532 13 222222 245666666554
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 006969 174 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (623)
Q Consensus 174 ~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ 225 (623)
...+.|.+ +..+ .-+..+.+.++.|+++|+. +..+.
T Consensus 257 -~~~d~v~i-------------k~~~-GGit~~~~i~~~A~~~g~~-~~~~~ 292 (345)
T 2zad_A 257 -EAVDYVNI-------------KLMK-SGISDALAIVEIAESSGLK-LMIGC 292 (345)
T ss_dssp -TCCSEEEE-------------CHHH-HHHHHHHHHHHHHHTTTCE-EEECC
T ss_pred -CCCCEEEE-------------eccc-ccHHHHHHHHHHHHHcCCe-EEEec
Confidence 24555543 2234 5577888999999999985 66654
No 306
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=76.83 E-value=35 Score=34.34 Aligned_cols=121 Identities=21% Similarity=0.206 Sum_probs=75.6
Q ss_pred HHHHHHHHHHcCCCe-EEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeec----Ccc---------------cccCHHHH
Q 006969 206 ARSMVKFARSLGCDD-VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP----DTV---------------GITMPTEF 265 (623)
Q Consensus 206 ~~~~v~~ak~~G~~~-V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~----DTv---------------G~~~P~~v 265 (623)
+.+..+.+|+.|... |-|- -++.-+++...++++++.++|||.|-|. |-+ ...+...+
T Consensus 7 i~~~f~~~~~~~~~ali~yi--~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~ 84 (271)
T 3nav_A 7 YQALFQRLSAAQQGAFVPFV--TIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDIC 84 (271)
T ss_dssp HHHHHHHHHHTTBCEEEEEE--ETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEE--eCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHH
Confidence 445666677776542 3332 3556778999999999999999966543 111 22455577
Q ss_pred HHHHHHHHHhCCCCcceeEEEeecCC--cchHHHH-HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcc
Q 006969 266 GKLIADIKANTPGIENVVISTHCQND--LGLSTAN-TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 266 ~~li~~l~~~~~~~~~v~i~~H~HND--~GlAvAN-slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
-++++.+|+..+. +||.+-..-+ +..++.+ ...+.++|++.+=.-=..+.| .+++...++..+
T Consensus 85 ~~~v~~~r~~~~~---~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee------~~~~~~~~~~~g 150 (271)
T 3nav_A 85 FELIAQIRARNPE---TPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNE------SQPFVAAAEKFG 150 (271)
T ss_dssp HHHHHHHHHHCTT---SCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGG------CHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCC---CCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHH------HHHHHHHHHHcC
Confidence 7899999987543 5676655433 3344454 457789999997554444433 344555555543
No 307
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=76.68 E-value=15 Score=41.42 Aligned_cols=134 Identities=15% Similarity=0.118 Sum_probs=84.6
Q ss_pred HHHHhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC---eEEEcccCC--CCCC
Q 006969 169 WEAVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD---DVEFSPEDA--GRSD 232 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~---~V~f~~eda--~r~d 232 (623)
.+..+.+|.+.|.+-.+. |+. ++...+|-+.+.-.+.+.+.++.+|+. |-+ .|.+++.|. ...+
T Consensus 147 A~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~ 226 (671)
T 1ps9_A 147 AQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGT 226 (671)
T ss_dssp HHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCC
T ss_pred HHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCC
Confidence 333466899998886653 121 222345667777777888888887775 322 245677553 2457
Q ss_pred HHHHHHHHHHHHHcCCcEEeec----Cc----ccccCH-HHHHHHHHHHHHhCCCCcceeEEEeecCCcch-HHHHHHHH
Q 006969 233 RKFLYEILGEVIKVGATTLNIP----DT----VGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAG 302 (623)
Q Consensus 233 ~e~l~~~~~~~~~aGa~~I~l~----DT----vG~~~P-~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl-AvANslaA 302 (623)
++...++++.+.++|++.|.+. +. .....| ....++++.+++.+. +||..= -|. -..++..+
T Consensus 227 ~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----iPvi~~----Ggi~~~~~a~~~ 298 (671)
T 1ps9_A 227 FAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVS----LPLVTT----NRINDPQVADDI 298 (671)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCS----SCEEEC----SSCCSHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcC----ceEEEe----CCCCCHHHHHHH
Confidence 7888899999999999999873 11 011112 223467788887763 455432 232 35677888
Q ss_pred HHhC-CCEE
Q 006969 303 ACAG-ARQV 310 (623)
Q Consensus 303 v~aG-A~~V 310 (623)
++.| ||.|
T Consensus 299 l~~g~aD~V 307 (671)
T 1ps9_A 299 LSRGDADMV 307 (671)
T ss_dssp HHTTSCSEE
T ss_pred HHcCCCCEE
Confidence 9998 8877
No 308
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=76.31 E-value=99 Score=34.21 Aligned_cols=39 Identities=26% Similarity=0.361 Sum_probs=31.2
Q ss_pred eEEEeCCC---cccCCCCCCCC-CHHHHHHHHHHHhHcC-----CCEEEEec
Q 006969 80 VRVFDTTL---RDGEQSPGATL-TSKEKLDIARQLAKLG-----VDIIEAGF 122 (623)
Q Consensus 80 v~I~DtTL---RDG~Q~~g~~~-t~e~Kl~Ia~~L~~~G-----vd~IEvGf 122 (623)
+-|+-+|. =||.+ .+ +.+..++.++.+.+.| .|+|.+|.
T Consensus 228 MGIlNvTPDSFsDGG~----~~~~~~~al~~a~~mv~~G~~~~~AdIIDIGg 275 (545)
T 2bmb_A 228 MAIFNATPDSFSDGGE----HFADIESQLNDIIKLCKDALYLHESVIIDVGG 275 (545)
T ss_dssp EEEEECSCSSTTTTTT----TTTCHHHHHHHHHHHHHHHHTTCSCEEEEEEC
T ss_pred EEEEeCCCCCCcCCCc----CcCCHHHHHHHHHHHHHcCCCCCCceEEEECC
Confidence 34777765 45543 35 8999999999999999 99999995
No 309
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=76.24 E-value=8.4 Score=38.49 Aligned_cols=166 Identities=14% Similarity=0.127 Sum_probs=78.9
Q ss_pred HHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcC-CCCEEEEEec
Q 006969 107 ARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA-KRPRIHTFIA 185 (623)
Q Consensus 107 a~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a-~~~~v~i~~~ 185 (623)
.+.|++.|.|.||+|.|.+.+... .++.+.+.+.. +. . .+.|+..+ ..+.++..+..+..+.+ +.+.|.+.+.
T Consensus 29 ~~~l~~~Gad~ielg~pr~~~~g~-~~~~~~~~l~~-~~-~-~~~pn~~~--~~~~~~~~~f~~~a~~agg~~~i~l~i~ 102 (264)
T 1xm3_A 29 KEAVAVSESDILTFAVRRMNIFEA-SQPNFLEQLDL-SK-Y-TLLPNTAG--ASTAEEAVRIARLAKASGLCDMIKVEVI 102 (264)
T ss_dssp HHHHHHHTCSEEEEETTSSTTC--------CTTCCG-GG-S-EEEEECTT--CSSHHHHHHHHHHHHHTTCCSSEEECCB
T ss_pred HHHHHHcCCeEEEEcccccccCCC-CHHHHHHHHHh-cC-C-eEcCCccc--cCCHHHHHHHHHHHHHcCCCCeEEEeec
Confidence 468899999999999996643111 11222221111 00 0 11233321 12233221222323333 3445554332
Q ss_pred CCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc---CCCeEE-EcccCCCCCCHHHHHHHHHHHHHcCCcEEee-cCccc--
Q 006969 186 TSGIHMEHKLRKTKQQVVEIARSMVKFARSL---GCDDVE-FSPEDAGRSDRKFLYEILGEVIKVGATTLNI-PDTVG-- 258 (623)
Q Consensus 186 ~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~---G~~~V~-f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l-~DTvG-- 258 (623)
... ... ++...+.++.++++ |+. +. ++. .+++ .++++.++|++.|.. .-..|
T Consensus 103 ~d~-------~~~----~~e~~~~~~~a~~~~~~g~~-vi~~~~-----~~~~----~a~~~~~~gad~v~~~~~~~Gt~ 161 (264)
T 1xm3_A 103 GCS-------RSL----LPDPVETLKASEQLLEEGFI-VLPYTS-----DDVV----LARKLEELGVHAIMPGASPIGSG 161 (264)
T ss_dssp CCT-------TTC----CBCHHHHHHHHHHHHHTTCC-EEEEEC-----SCHH----HHHHHHHHTCSCBEECSSSTTCC
T ss_pred CCC-------ccc----ccchHHHHHHHHHHHCCCeE-EEEEcC-----CCHH----HHHHHHHhCCCEEEECCcccCCC
Confidence 211 011 12233455666666 886 44 332 1233 356667788887622 11122
Q ss_pred --ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEEE
Q 006969 259 --ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVE 311 (623)
Q Consensus 259 --~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~Vd 311 (623)
...| +.++.+++.. + +|+.+- .|.. -.++..++++||+.|-
T Consensus 162 ~~~~~~----~~l~~i~~~~-~---iPviv~----gGI~t~eda~~~~~~GAdgVi 205 (264)
T 1xm3_A 162 QGILNP----LNLSFIIEQA-K---VPVIVD----AGIGSPKDAAYAMELGADGVL 205 (264)
T ss_dssp CCCSCH----HHHHHHHHHC-S---SCBEEE----SCCCSHHHHHHHHHTTCSEEE
T ss_pred CCCCCH----HHHHHHHhcC-C---CCEEEE----eCCCCHHHHHHHHHcCCCEEE
Confidence 2233 3666666653 2 334332 4665 5678888999999874
No 310
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=76.21 E-value=7.5 Score=40.12 Aligned_cols=78 Identities=23% Similarity=0.247 Sum_probs=49.3
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeecC--cccccCH----HHHHHHH---HHHHHhCCCCcceeEEEeecCCcchHH
Q 006969 227 DAGRS-DRKFLYEILGEVIKVGATTLNIPD--TVGITMP----TEFGKLI---ADIKANTPGIENVVISTHCQNDLGLST 296 (623)
Q Consensus 227 da~r~-d~e~l~~~~~~~~~aGa~~I~l~D--TvG~~~P----~~v~~li---~~l~~~~~~~~~v~i~~H~HND~GlAv 296 (623)
|+++. +++.+++.++..++.||+.|-+.= |--.+.| +|+.+++ +.|++.. +++|++=+=+ -
T Consensus 25 dgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~----~vpiSIDT~~-----~ 95 (314)
T 2vef_A 25 DGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES----DVLISIDTWK-----S 95 (314)
T ss_dssp -----CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC----CCEEEEECSC-----H
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC----CceEEEeCCC-----H
Confidence 66665 789999999999999999987642 2111111 5666554 4466654 3788885544 3
Q ss_pred HHHHHHHHhCCCEEEec
Q 006969 297 ANTIAGACAGARQVEVT 313 (623)
Q Consensus 297 ANslaAv~aGA~~Vd~T 313 (623)
.-+.+|+++||+.|+--
T Consensus 96 ~Va~aAl~aGa~iINDV 112 (314)
T 2vef_A 96 QVAEAALAAGADLVNDI 112 (314)
T ss_dssp HHHHHHHHTTCCEEEET
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 45578999999999643
No 311
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=76.11 E-value=5.4 Score=39.76 Aligned_cols=161 Identities=15% Similarity=0.121 Sum_probs=0.0
Q ss_pred HHHHHHhHcCCCEEEE----ec--CCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHHHHHhcCCC
Q 006969 105 DIARQLAKLGVDIIEA----GF--PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAWEAVKYAKR 177 (623)
Q Consensus 105 ~Ia~~L~~~Gvd~IEv----Gf--P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~eal~~a~~ 177 (623)
+-++.|.++|+|++.+ |. |.-+-. .+.++.|++..++. +--+-+.-.++.+ ++.+.++ |+
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G-~~~v~~lr~~~p~~--------~ldvHLmv~~p~~~i~~~~~a----GA 110 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFG-PMVLKALRDYGITA--------GMDVHLMVKPVDALIESFAKA----GA 110 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCC-HHHHHHHHHHTCCS--------CEEEEEECSSCHHHHHHHHHH----TC
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcC-HHHHHHHHHhCCCC--------eEEEEEeeCCHHHHHHHHHHc----CC
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC-eEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEee---
Q 006969 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD-DVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI--- 253 (623)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~-~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l--- 253 (623)
+.|++-. |..+.+.+.++.+|++|++ -|.++|. ++.+.+.+++. .+|.|.+
T Consensus 111 d~itvH~----------------Ea~~~~~~~i~~ir~~G~k~Gvalnp~----Tp~e~l~~~l~-----~vD~VlvMsV 165 (246)
T 3inp_A 111 TSIVFHP----------------EASEHIDRSLQLIKSFGIQAGLALNPA----TGIDCLKYVES-----NIDRVLIMSV 165 (246)
T ss_dssp SEEEECG----------------GGCSCHHHHHHHHHTTTSEEEEEECTT----CCSGGGTTTGG-----GCSEEEEECS
T ss_pred CEEEEcc----------------ccchhHHHHHHHHHHcCCeEEEEecCC----CCHHHHHHHHh-----cCCEEEEeee
Q ss_pred -cCcccccCHHHHHHHHHHHHHhCCCCcc----eeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 254 -PDTVGITMPTEFGKLIADIKANTPGIEN----VVISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 254 -~DTvG~~~P~~v~~li~~l~~~~~~~~~----v~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
|..-|-..-.+.-+.|+.+|+..+ + ++|.+ |-|....|.-.++++||+.+
T Consensus 166 ~PGfgGQ~fi~~~l~KI~~lr~~~~---~~~~~~~I~V----DGGI~~~ti~~~~~aGAD~~ 220 (246)
T 3inp_A 166 NPGFGGQKFIPAMLDKAKEISKWIS---STDRDILLEI----DGGVNPYNIAEIAVCGVNAF 220 (246)
T ss_dssp CTTC--CCCCTTHHHHHHHHHHHHH---HHTSCCEEEE----ESSCCTTTHHHHHTTTCCEE
T ss_pred cCCCCCcccchHHHHHHHHHHHHHH---hcCCCeeEEE----ECCcCHHHHHHHHHcCCCEE
No 312
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=76.03 E-value=25 Score=35.41 Aligned_cols=96 Identities=10% Similarity=-0.034 Sum_probs=51.6
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcC
Q 006969 168 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 168 a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aG 247 (623)
-++.+...|++.|-+..++.+.+ ..|.+|-.+.++.+++.+. | |..+ .+..+.+...+.++.+.++|
T Consensus 24 lv~~li~~Gv~gl~v~GttGE~~-----~Ls~~Er~~v~~~~~~~~~--g---vi~G---vg~~~t~~ai~la~~A~~~G 90 (286)
T 2r91_A 24 HVKNITSKGVDVVFVAGTTGLGP-----ALSLQEKMELTDAATSAAR--R---VIVQ---VASLNADEAIALAKYAESRG 90 (286)
T ss_dssp HHHHHHHTTCCEEEETSTTTTGG-----GSCHHHHHHHHHHHHHHCS--S---EEEE---CCCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhC--C---EEEe---eCCCCHHHHHHHHHHHHhcC
Confidence 34444455666666666666532 2466665555444444432 2 3332 23345566667777777777
Q ss_pred CcEEeecCc-ccc-cCHHHHHHHHHHHHHhC
Q 006969 248 ATTLNIPDT-VGI-TMPTEFGKLIADIKANT 276 (623)
Q Consensus 248 a~~I~l~DT-vG~-~~P~~v~~li~~l~~~~ 276 (623)
||.+.+.=- .-- .+++++.+.++.+.+..
T Consensus 91 adavlv~~P~y~~~~s~~~l~~~f~~va~a~ 121 (286)
T 2r91_A 91 AEAVASLPPYYFPRLSERQIAKYFRDLCSAV 121 (286)
T ss_dssp CSEEEECCSCSSTTCCHHHHHHHHHHHHHHC
T ss_pred CCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 776544311 111 35566666666666655
No 313
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=75.97 E-value=11 Score=39.86 Aligned_cols=134 Identities=9% Similarity=0.007 Sum_probs=78.4
Q ss_pred HHHHhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CC-C-eEEEcccCC-----CC
Q 006969 169 WEAVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GC-D-DVEFSPEDA-----GR 230 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~-~-~V~f~~eda-----~r 230 (623)
.+..+.+|.+.|.|-.+. |+. ++...+|-+.+.-.+.+.+.|+.+|+. |. . .|.+++.+. ..
T Consensus 173 A~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~ 252 (376)
T 1icp_A 173 ARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDT 252 (376)
T ss_dssp HHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCS
T ss_pred HHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCC
Confidence 334466899999887653 221 222345666777777777777777764 31 1 255677532 23
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCcc-cccCHH-HHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-C
Q 006969 231 SDRKFLYEILGEVIKVGATTLNIPDTV-GITMPT-EFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-A 307 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~aGa~~I~l~DTv-G~~~P~-~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A 307 (623)
.+.+...++++.+.++|++.|.+..-. ....|. ...++++.+++.++ +||..=. +. -...+..+++.| |
T Consensus 253 ~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~----iPvi~~G--~i--~~~~a~~~l~~g~a 324 (376)
T 1icp_A 253 NPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYK----GTFIVAG--GY--DREDGNRALIEDRA 324 (376)
T ss_dssp CHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCC----SCEEEES--SC--CHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcC----CCEEEeC--CC--CHHHHHHHHHCCCC
Confidence 456778899999999999999885310 001121 11235667777764 3443222 12 135667777777 7
Q ss_pred CEE
Q 006969 308 RQV 310 (623)
Q Consensus 308 ~~V 310 (623)
|.|
T Consensus 325 D~V 327 (376)
T 1icp_A 325 DLV 327 (376)
T ss_dssp SEE
T ss_pred cEE
Confidence 766
No 314
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=75.75 E-value=25 Score=36.70 Aligned_cols=98 Identities=17% Similarity=0.295 Sum_probs=64.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeeccc-c-hhhHHHHHHHHhc
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-N-ERDIKTAWEAVKY 174 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~-~~dI~~a~eal~~ 174 (623)
.++.++-+++++.|.+.|++.||-.+| +.+++..+++++... +| |++=.+. . ..+++..++.
T Consensus 210 ~~~~~~a~~~~~~l~~~~i~~iE~P~~---~~~~~~~~~l~~~~~---------iP-Ia~dE~~~~~~~~~~~~i~~--- 273 (382)
T 1rvk_A 210 WYSRTDALALGRGLEKLGFDWIEEPMD---EQSLSSYKWLSDNLD---------IP-VVGPESAAGKHWHRAEWIKA--- 273 (382)
T ss_dssp TCCHHHHHHHHHHHHTTTCSEEECCSC---TTCHHHHHHHHHHCS---------SC-EEECSSCSSHHHHHHHHHHT---
T ss_pred CCCHHHHHHHHHHHHhcCCCEEeCCCC---hhhHHHHHHHHhhCC---------CC-EEEeCCccCcHHHHHHHHHc---
Confidence 468999999999999999999998654 456788888877532 13 2222222 3 5666665543
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~ 224 (623)
..++.|.+ +.+ +. --+..+.++++.|+++|+. +..+
T Consensus 274 ~~~d~v~i--k~~------~~-----GGit~~~~i~~~A~~~g~~-~~~~ 309 (382)
T 1rvk_A 274 GACDILRT--GVN------DV-----GGITPALKTMHLAEAFGME-CEVH 309 (382)
T ss_dssp TCCSEEEE--CHH------HH-----TSHHHHHHHHHHHHHTTCC-EEEC
T ss_pred CCCCEEee--Cch------hc-----CCHHHHHHHHHHHHHcCCe-Eeec
Confidence 34566554 110 11 1256677889999999986 6555
No 315
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=75.68 E-value=15 Score=38.52 Aligned_cols=119 Identities=18% Similarity=0.193 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
+..++.++-+++++.|.++|+++||=-+| +.|++..+++++..+- |...+=.-....|++..++.
T Consensus 202 n~~~~~~~A~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~i~~--- 266 (383)
T 3i4k_A 202 NARWDRRTALHYLPILAEAGVELFEQPTP---ADDLETLREITRRTNV---------SVMADESVWTPAEALAVVKA--- 266 (383)
T ss_dssp TTCSCHHHHHHHHHHHHHTTCCEEESCSC---TTCHHHHHHHHHHHCC---------EEEESTTCSSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEECCCC---hhhHHHHHHHHhhCCC---------CEEecCccCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHH
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGE 242 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~ 242 (623)
..++.|.+ +.++---+..+.+.+..|+++|+. +..+....+.......+.++.+
T Consensus 267 ~~~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~~~~~es~i~~aa~~hlaaa 320 (383)
T 3i4k_A 267 QAADVIAL-------------KTTKHGGLLESKKIAAIAEAGGLA-CHGATSLEGPIGTAASLQFAAS 320 (383)
T ss_dssp TCCSEEEE-------------CTTTTTSHHHHHHHHHHHHHTTCE-EEECCSCCCHHHHHHHHHHHHH
T ss_pred CCCCEEEE-------------cccccCCHHHHHHHHHHHHHcCCe-EEeCCCCccHHHHHHHHHHHHc
No 316
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=75.67 E-value=10 Score=39.84 Aligned_cols=126 Identities=13% Similarity=0.089 Sum_probs=78.5
Q ss_pred HHhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC--eEEEcccCC----CC-CC
Q 006969 171 AVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD--DVEFSPEDA----GR-SD 232 (623)
Q Consensus 171 al~~a~~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~--~V~f~~eda----~r-~d 232 (623)
..+.+|.+.|.|-.+- |+. ++...+|-|.+.-.+.+.+.|+.+|+. |.+ .|.+++.+. .. .+
T Consensus 169 ~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~ 248 (361)
T 3gka_A 169 NARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDP 248 (361)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCH
T ss_pred HHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCCc
Confidence 3466899999987764 232 233345667776667777777777654 321 356687532 11 22
Q ss_pred HHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-CCEE
Q 006969 233 RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQV 310 (623)
Q Consensus 233 ~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A~~V 310 (623)
.+...++++.+.++|++.|.+.... ..| ++++.+++.++. ||-.=. |.-...+..+++.| ||.|
T Consensus 249 ~~~~~~la~~l~~~Gvd~i~v~~~~--~~~----~~~~~ik~~~~i----Pvi~~G----git~e~a~~~l~~G~aD~V 313 (361)
T 3gka_A 249 AATFGHVARELGRRRIAFLFARESF--GGD----AIGQQLKAAFGG----PFIVNE----NFTLDSAQAALDAGQADAV 313 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCC--STT----CCHHHHHHHHCS----CEEEES----SCCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCC--CCH----HHHHHHHHHcCC----CEEEeC----CCCHHHHHHHHHcCCccEE
Confidence 5677899999999999999886532 222 466777777642 332211 12356677888887 7765
No 317
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=75.66 E-value=36 Score=35.69 Aligned_cols=139 Identities=15% Similarity=0.047 Sum_probs=79.1
Q ss_pred hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-----CCC-eEEEcccCCCCCCHHH
Q 006969 162 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-----GCD-DVEFSPEDAGRSDRKF 235 (623)
Q Consensus 162 ~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~-----G~~-~V~f~~eda~r~d~e~ 235 (623)
.+|.-.+++.+.. ..+.|.+-++.-...-.. +-.+ .+.+..+.+.++.+++. .+. .|-..| ..+.+.
T Consensus 163 ~~dy~~~~~~~~~-~ad~ielNisCPn~~G~~-~l~~-~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p----~~~~~~ 235 (367)
T 3zwt_A 163 AEDYAEGVRVLGP-LADYLVVNVSSPNTAGLR-SLQG-KAELRRLLTKVLQERDGLRRVHRPAVLVKIAP----DLTSQD 235 (367)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEECCCTTSTTGG-GGGS-HHHHHHHHHHHHHHHHTSCGGGCCEEEEEECS----CCCHHH
T ss_pred HHHHHHHHHHHhh-hCCEEEEECCCCCCCCcc-ccCC-HHHHHHHHHHHHHHHhhccccCCceEEEEeCC----CCCHHH
Confidence 4555555555533 357776655432211000 1112 34455555555555432 222 123355 245578
Q ss_pred HHHHHHHHHHcCCcEEeecCcc---------------cccC----HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH
Q 006969 236 LYEILGEVIKVGATTLNIPDTV---------------GITM----PTEFGKLIADIKANTPGIENVVISTHCQNDLGLST 296 (623)
Q Consensus 236 l~~~~~~~~~aGa~~I~l~DTv---------------G~~~----P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv 296 (623)
+.++++.+.++|+|.|.+-.|. |.+. +....++|+.+++.+++ +++|..=.-=.. .
T Consensus 236 ~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~--~ipvI~~GGI~s---~ 310 (367)
T 3zwt_A 236 KEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQG--RVPIIGVGGVSS---G 310 (367)
T ss_dssp HHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTT--CSCEEEESSCCS---H
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCC--CceEEEECCCCC---H
Confidence 8999999999999999988775 2221 12234788999998863 345543222111 3
Q ss_pred HHHHHHHHhCCCEEEe
Q 006969 297 ANTIAGACAGARQVEV 312 (623)
Q Consensus 297 ANslaAv~aGA~~Vd~ 312 (623)
.-++.++++||+.|..
T Consensus 311 ~da~~~l~~GAd~V~v 326 (367)
T 3zwt_A 311 QDALEKIRAGASLVQL 326 (367)
T ss_dssp HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 5677888899998865
No 318
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=75.65 E-value=95 Score=33.64 Aligned_cols=197 Identities=13% Similarity=0.133 Sum_probs=121.2
Q ss_pred CCCHHHHHHHHH-HHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcC
Q 006969 97 TLTSKEKLDIAR-QLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (623)
Q Consensus 97 ~~t~e~Kl~Ia~-~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 175 (623)
.+|.+|+..|.. ...+.|+|+|=+-|.. +++|...++.+.+..+..+ .+.+.| . +.+.++.. +.+..+
T Consensus 178 ~lTekD~~dl~~~~~~~~~vD~Ia~SfVr-~a~Dv~~~r~~l~~~g~~~----~iiaKI---E--~~eav~nl-deIl~~ 246 (461)
T 3qtg_A 178 TPAEEDVEALKAISPIRDNIDYVAISLAK-SCKDVDSVRSLLTELGFQS----QVAVKI---E--TKGAVNNL-EELVQC 246 (461)
T ss_dssp SSCHHHHHHHHHHGGGGGGCCEEEECSCC-SHHHHHHHHHHHHHTTCCC----EEEEEE---C--SHHHHHTH-HHHHHT
T ss_pred CCCHHHHHHHHHHHHhhcCCCEEEecCCC-CHHHHHHHHHHHHhcCCCc----eEEEEE---C--CHHHHHhH-HHHHHh
Confidence 467888877752 6678899999998874 6788888887766533210 112222 1 34444432 222222
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------cccCCCCCCHHHHHHHHHHHHHcCCc
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGAT 249 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~~eda~r~d~e~l~~~~~~~~~aGa~ 249 (623)
.+. ++++-.|+=+ -+..+++...-+..++.|+.+|+. |.+ |.....+-....+.+++.++.+ |+|
T Consensus 247 -sDg--ImVaRGDLgv----ei~~e~v~~~Qk~ii~~~~~~gkp-vi~ATQMLeSMi~~p~PTRAEvsDVanAV~d-GaD 317 (461)
T 3qtg_A 247 -SDY--VVVARGDLGL----HYGLDALPIVQRRIVHTSLKYGKP-IAVATQLLDSMQSSPIPTRAEINDVFTTASM-GVD 317 (461)
T ss_dssp -CSE--EEEEHHHHTT----TSCTTTHHHHHHHHHHHHHHTTCC-EEEESSSSGGGGTCSSCCHHHHHHHHHHHHT-TCS
T ss_pred -ccc--EEEccccccc----cCCHHHHHHHHHHHHHHHHHhCCC-EEEeccchHhhccCCCccHHHHHHHHHHHHh-CCc
Confidence 344 3444444322 234567777888999999999986 554 2334556677888888887764 999
Q ss_pred EEeec-CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH--HHHHHHHHHhCCCEEEeccCC
Q 006969 250 TLNIP-DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS--TANTIAGACAGARQVEVTING 316 (623)
Q Consensus 250 ~I~l~-DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA--vANslaAv~aGA~~Vd~Tv~G 316 (623)
.+.|. .|.-.-.|.+.-+.+..+.+..-... . .++...+..-+ .|....|-..+|..|-.|--|
T Consensus 318 avMLSgETA~G~yPveaV~~m~~I~~~aE~~~--~-~~~~~~~~~~aia~aa~~~a~~~~a~Iv~~T~SG 384 (461)
T 3qtg_A 318 SLWLTNETASGKYPLAAVSWLSRILMNVEYQI--P-QSPLLQNSRDRFAKGLVELAQDLGANILVFSMSG 384 (461)
T ss_dssp EEEECHHHHTSSCHHHHHHHHHHHHHTCCCCC--C-CCCCCCSHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred EEEEcccccCCCCHHHHHHHHHHHHHHHHhhh--h-hccCCCCHHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 99997 68888899998888888887653210 0 01222222223 333445666788755555554
No 319
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=75.51 E-value=13 Score=38.89 Aligned_cols=99 Identities=17% Similarity=0.114 Sum_probs=64.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecc-cchhhHHHHHHHHhcC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYA 175 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~~a 175 (623)
.++.++-+++++.|.+.|++.||-.+| +.|++..+++++... +|.+ +=.+ ....+++..++. .
T Consensus 201 ~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------iPI~-~dE~~~~~~~~~~~i~~---~ 264 (371)
T 2ovl_A 201 KWTVDGAIRAARALAPFDLHWIEEPTI---PDDLVGNARIVRESG---------HTIA-GGENLHTLYDFHNAVRA---G 264 (371)
T ss_dssp CSCHHHHHHHHHHHGGGCCSEEECCSC---TTCHHHHHHHHHHHC---------SCEE-ECTTCCSHHHHHHHHHH---T
T ss_pred CCCHHHHHHHHHHHHhcCCCEEECCCC---cccHHHHHHHHhhCC---------CCEE-eCCCCCCHHHHHHHHHc---C
Confidence 468999999999999999999997654 456778888877542 1322 2222 245666666554 3
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ 225 (623)
.++.|.+ .. .+---+..+.++++.|+++|+. +....
T Consensus 265 ~~d~v~i--k~-----------~~~GGi~~~~~i~~~A~~~gi~-~~~h~ 300 (371)
T 2ovl_A 265 SLTLPEP--DV-----------SNIGGYTTFRKVAALAEANNML-LTSHG 300 (371)
T ss_dssp CCSEECC--CT-----------TTTTSHHHHHHHHHHHHHTTCC-EEECS
T ss_pred CCCEEee--Cc-----------cccCCHHHHHHHHHHHHHcCCe-Ecccc
Confidence 4555432 11 1112255677889999999986 55543
No 320
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=75.49 E-value=1.1e+02 Score=34.31 Aligned_cols=158 Identities=20% Similarity=0.235 Sum_probs=101.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
.+|.+|+..|. .-.+.|+|+|=+-|.. +++|...+|.+.+..+.. ..|.+-. -+.+.++.. +.+..+
T Consensus 190 ~ltekD~~dl~-f~~~~~vD~Ia~SFVr-~a~Dv~~~r~~l~~~~~~--------i~IiaKI-E~~eav~nl-deIl~~- 256 (606)
T 3t05_A 190 GITEKDAEDIR-FGIKENVDFIAASFVR-RPSDVLEIREILEEQKAN--------ISVFPKI-ENQEGIDNI-EEILEV- 256 (606)
T ss_dssp SSCHHHHHHHH-HHHHTTCSEEEETTCC-SHHHHHHHHHHHHHTTCC--------CEEEECC-CSHHHHHTH-HHHHHH-
T ss_pred CCChhHHHHHH-HHHHcCCCEEEECCCC-CHHHHHHHHHHHHhcCCC--------CeEEEEe-CCHHHHHhH-HHHHHh-
Confidence 36788888774 5567999999998874 678887788776653221 1121111 133333321 222111
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------cccCCCCCCHHHHHHHHHHHHHcCCcE
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGATT 250 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~~eda~r~d~e~l~~~~~~~~~aGa~~ 250 (623)
.+. ++++-.|+=++ +..+++...-+.+++.|+.+|+. |.+ |.....+-....+.+++.++.+ |+|.
T Consensus 257 sDG--ImVARGDLgve----i~~e~vp~~Qk~ii~~~~~~gkp-vi~ATQMLeSMi~~p~PTRAEvsDVanAv~d-GaDa 328 (606)
T 3t05_A 257 SDG--LMVARGDMGVE----IPPEKVPMVQKDLIRQCNKLGKP-VITATQMLDSMQRNPRATRAEASDVANAIYD-GTDA 328 (606)
T ss_dssp CSC--EEEEHHHHHHH----SCGGGHHHHHHHHHHHHHHHTCC-EEEESSSSGGGTTCSSCCHHHHHHHHHHHHH-TCSE
T ss_pred CCE--EEEccccccCc----CCHHHHHHHHHHHHHHHHHcCCC-eEEehHHHHHhhcCCCccHHHHHHHHHHHHc-CCCE
Confidence 333 44555554433 34567777778999999999986 655 2334556677888888888765 9999
Q ss_pred Eeec-CcccccCHHHHHHHHHHHHHh
Q 006969 251 LNIP-DTVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 251 I~l~-DTvG~~~P~~v~~li~~l~~~ 275 (623)
|.|. .|.-...|.+.-+.+..+.+.
T Consensus 329 vMLSgETA~G~yPveaV~~m~~I~~~ 354 (606)
T 3t05_A 329 VMLSGETAAGLYPEEAVKTMRNIAVS 354 (606)
T ss_dssp EEECHHHHSCSCSHHHHHHHHHHHHH
T ss_pred EEecccccCCCCHHHHHHHHHHHHHH
Confidence 9997 677778888877776665543
No 321
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=75.33 E-value=5.9 Score=40.62 Aligned_cols=205 Identities=13% Similarity=0.074 Sum_probs=119.2
Q ss_pred HHHHhHcCCCEEEEec----------CCCCh---h-HHHHHHHHHHHhccccccCCCccceEE----eecccchhhHHHH
Q 006969 107 ARQLAKLGVDIIEAGF----------PAASK---E-DFEAVRTIAKEVGNAVDAESGYVPVIC----GLSRCNERDIKTA 168 (623)
Q Consensus 107 a~~L~~~Gvd~IEvGf----------P~~s~---~-d~e~v~~i~~~~~~~~~~~~~l~~~i~----~~~r~~~~dI~~a 168 (623)
++.++++|||.|=+|. |...+ + -...++.|++.... |.++ |++ ....+.+.
T Consensus 35 A~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~---------PviaD~d~Gyg--~~~~v~~~ 103 (298)
T 3eoo_A 35 AKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNL---------PLLVDIDTGWG--GAFNIART 103 (298)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCS---------CEEEECTTCSS--SHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCC---------eEEEECCCCCC--CHHHHHHH
Confidence 5667889999998862 33222 1 24566666664321 3332 233 45556666
Q ss_pred HHHHhcCCCCEEEEEecCCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC-CCCHHHHHHHHHHHH
Q 006969 169 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVI 244 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~Sd~---h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~-r~d~e~l~~~~~~~~ 244 (623)
.+.+..+|+..|+|-..+++- |+..+-=.+.+|..++++.+++..+ |.+.+...=.|+. ....+..++=+++..
T Consensus 104 v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~--~~~~~I~ARTDa~~~~gldeai~Ra~ay~ 181 (298)
T 3eoo_A 104 IRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDART--DETFVIMARTDAAAAEGIDAAIERAIAYV 181 (298)
T ss_dssp HHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCS--STTSEEEEEECTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhcc--CCCeEEEEeehhhhhcCHHHHHHHHHhhH
Confidence 666667899999998877641 1110001367888888776655433 3332222111221 112455666677788
Q ss_pred HcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcc
Q 006969 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNA 324 (623)
Q Consensus 245 ~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa 324 (623)
++|||.|.+. |..+++++.++.+.+. .| +.+-+-..+...+ -+.-.--+.|+++|-..... =|+-+.
T Consensus 182 ~AGAD~if~~---~~~~~ee~~~~~~~~~--~P----l~~n~~~~g~tp~--~~~~eL~~lGv~~v~~~~~~--~raa~~ 248 (298)
T 3eoo_A 182 EAGADMIFPE---AMKTLDDYRRFKEAVK--VP----ILANLTEFGSTPL--FTLDELKGANVDIALYCCGA--YRAMNK 248 (298)
T ss_dssp HTTCSEEEEC---CCCSHHHHHHHHHHHC--SC----BEEECCTTSSSCC--CCHHHHHHTTCCEEEECSHH--HHHHHH
T ss_pred hcCCCEEEeC---CCCCHHHHHHHHHHcC--CC----eEEEeccCCCCCC--CCHHHHHHcCCeEEEEchHH--HHHHHH
Confidence 9999999886 3457898888888774 33 2222211221111 12445556799998544333 478888
Q ss_pred cHHHHHHHHHhcc
Q 006969 325 SLEEVVMAFKCRG 337 (623)
Q Consensus 325 ~lEevv~~L~~~~ 337 (623)
.+++++..|...|
T Consensus 249 a~~~~~~~i~~~g 261 (298)
T 3eoo_A 249 AALNFYETVRRDG 261 (298)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcC
Confidence 8888888887755
No 322
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=75.31 E-value=6.7 Score=40.13 Aligned_cols=81 Identities=28% Similarity=0.312 Sum_probs=52.3
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeecC--cc-c---ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHH
Q 006969 227 DAGRS-DRKFLYEILGEVIKVGATTLNIPD--TV-G---ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 299 (623)
Q Consensus 227 da~r~-d~e~l~~~~~~~~~aGa~~I~l~D--Tv-G---~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANs 299 (623)
|+++. +++.+++.++..++.||+.|-+.= |- | +...+|+.+++..++..... +++|++=+=+ -.-+
T Consensus 38 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~--~vpiSIDT~~-----~~Va 110 (294)
T 2y5s_A 38 DGGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL--NVPLSIDTYK-----PAVM 110 (294)
T ss_dssp ------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG--CSCEEEECCC-----HHHH
T ss_pred CCCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC--CCeEEEECCC-----HHHH
Confidence 56654 788999999999999999987752 21 2 33357777777666553211 4678885443 3445
Q ss_pred HHHHHhCCCEEEecc
Q 006969 300 IAGACAGARQVEVTI 314 (623)
Q Consensus 300 laAv~aGA~~Vd~Tv 314 (623)
.+|+++||+.|+---
T Consensus 111 ~aAl~aGa~iINdVs 125 (294)
T 2y5s_A 111 RAALAAGADLINDIW 125 (294)
T ss_dssp HHHHHHTCSEEEETT
T ss_pred HHHHHcCCCEEEECC
Confidence 688889999996543
No 323
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=75.22 E-value=25 Score=35.71 Aligned_cols=107 Identities=14% Similarity=0.108 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHcCCC--eEEEcccCCCCCCHHHHH-HHHHHHHH--cCCcEEeecCcccccCHHHHHHHHHHHHH
Q 006969 200 QQVVEIARSMVKFARSLGCD--DVEFSPEDAGRSDRKFLY-EILGEVIK--VGATTLNIPDTVGITMPTEFGKLIADIKA 274 (623)
Q Consensus 200 ee~l~~~~~~v~~ak~~G~~--~V~f~~eda~r~d~e~l~-~~~~~~~~--aGa~~I~l~DTvG~~~P~~v~~li~~l~~ 274 (623)
+..++.+.+.++.|..+|.. .+.|.|-... .+.+..+ .+++.+.+ .-..+|.|--|.|..+++++.++++.+.
T Consensus 138 e~Si~~l~~~l~~a~~lG~~~a~~v~HpG~~~-~~~e~~~~r~~e~l~~~~~a~~~l~lEn~~~~~t~~el~~l~~~~~- 215 (301)
T 2j6v_A 138 ERSLAELRYSARLLSLLGAEDGVLVLHLGGAY-GEKGKALRRFVENLRGEEEVLRYLALENDERLWNVEEVLKAAEALG- 215 (301)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCEEEEECCCCT-TCHHHHHHHHHHHHTTCHHHHHHEEEECCSSSCCHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEECCCcCC-CCHHHHHHHHHHHHhHHHhhcceEEEEeCCCCCCHHHHHHHHhcCC-
Confidence 45567777888888888854 5666653211 1233222 22232222 0012788888888888888888888773
Q ss_pred hCCCCcceeEEEeecCCc--chHHHHHHHHHHh---CCCEEEec
Q 006969 275 NTPGIENVVISTHCQNDL--GLSTANTIAGACA---GARQVEVT 313 (623)
Q Consensus 275 ~~~~~~~v~i~~H~HND~--GlAvANslaAv~a---GA~~Vd~T 313 (623)
++ +.|.+|.|+-- +..+.+.+..+.. ....|+.+
T Consensus 216 -vg----vclDtH~~~~g~~~~~~~~~~~~~~~~~~~~~hiHls 254 (301)
T 2j6v_A 216 -VP----VVVDTLHHALNPGRLPLEEALRLAFPTWRGRPKVHLA 254 (301)
T ss_dssp -CC----EEEEHHHHHHSCTTCCHHHHHHHHGGGCSSCCEEEEC
T ss_pred -CE----EEEeHHHHhcCCCCCChHHHHHHHHHHHhhCCEEEEC
Confidence 43 77888666543 3445555555533 23566664
No 324
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=75.18 E-value=31 Score=33.56 Aligned_cols=100 Identities=16% Similarity=0.178 Sum_probs=65.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCccccc---CHHHHHHHHHHHHHhCCCCc-ceeEEEeecCCcchHHHHHHHHHHhC
Q 006969 231 SDRKFLYEILGEVIKVGATTLNIPDTVGIT---MPTEFGKLIADIKANTPGIE-NVVISTHCQNDLGLSTANTIAGACAG 306 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~---~P~~v~~li~~l~~~~~~~~-~v~i~~H~HND~GlAvANslaAv~aG 306 (623)
.+.+-...-++.+++.||+.|-+.=-.|.. .-.++.+-+..+++..++.. ++.|+.-..++-- =.--+..|+++|
T Consensus 68 ~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~-i~~a~~ia~eaG 146 (220)
T 1ub3_A 68 QEKEVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEE-IARLAEAAIRGG 146 (220)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHH-HHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHH-HHHHHHHHHHhC
Confidence 455666666788889999998887677754 45667777778877654311 2344443344332 233567789999
Q ss_pred CCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 307 ARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 307 A~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
|+.|-++- |.+ +|++.+|++-...+
T Consensus 147 ADfVKTsT-Gf~--~~gat~~dv~~m~~ 171 (220)
T 1ub3_A 147 ADFLKTST-GFG--PRGASLEDVALLVR 171 (220)
T ss_dssp CSEEECCC-SSS--SCCCCHHHHHHHHH
T ss_pred CCEEEeCC-CCC--CCCCCHHHHHHHHH
Confidence 99999885 222 47788887654444
No 325
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=75.17 E-value=15 Score=38.08 Aligned_cols=67 Identities=19% Similarity=0.281 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEcc--cCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHH
Q 006969 197 KTKQQVVEIARSMVKFARSLGCDDVEFSP--EDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIA 270 (623)
Q Consensus 197 ~t~ee~l~~~~~~v~~ak~~G~~~V~f~~--eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~ 270 (623)
++.+|+++.+ +.+++.|+..|.|.. .+....+.+++.++++.+.+.|.. +.+ |.|.++++.+..+.+
T Consensus 99 ~s~eei~~~~----~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~-i~~--t~G~l~~e~l~~L~~ 167 (369)
T 1r30_A 99 MEVEQVLESA----RKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLE-ACM--TLGTLSESQAQRLAN 167 (369)
T ss_dssp CCHHHHHHHH----HHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSE-EEE--ECSSCCHHHHHHHHH
T ss_pred CCHHHHHHHH----HHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCe-EEE--ecCCCCHHHHHHHHH
Confidence 5777766644 445567877677632 112346789999999999988875 343 899988876655543
No 326
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=74.91 E-value=7.5 Score=41.91 Aligned_cols=84 Identities=10% Similarity=0.118 Sum_probs=59.5
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC-CCCHHHHHHHHHHHHHc
Q 006969 168 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVIKV 246 (623)
Q Consensus 168 a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~-r~d~e~l~~~~~~~~~a 246 (623)
-++.++.+|+.+|++-+-+.+-...+.+++.. ..+.+.++++.+++.|+..|.++...+- .-+.+.+.+.++.+.+.
T Consensus 155 ~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~--~~~~~~~ai~~~r~~G~~~v~~dlI~GlPget~e~~~~tl~~~~~l 232 (457)
T 1olt_A 155 VLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQ--DEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232 (457)
T ss_dssp HHHHHHHTTCCEEEEEEECCCHHHHHHHTCCC--CHHHHHHHHHHHHHTTCCSCEEEEEESCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeeccCCHHHHHHhCCCC--CHHHHHHHHHHHHHcCCCcEEEEEEcCCCCCCHHHHHHHHHHHHhc
Confidence 35667788999999977666556666777642 2466778899999999852433332221 34678888999999999
Q ss_pred CCcEEee
Q 006969 247 GATTLNI 253 (623)
Q Consensus 247 Ga~~I~l 253 (623)
|++.|.+
T Consensus 233 ~~~~i~~ 239 (457)
T 1olt_A 233 NPDRLSV 239 (457)
T ss_dssp CCSEEEE
T ss_pred CcCEEEe
Confidence 9988765
No 327
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=74.54 E-value=7.9 Score=39.03 Aligned_cols=78 Identities=14% Similarity=0.139 Sum_probs=53.3
Q ss_pred CHHHHHHHHHHHHH-cCCcEEee--c--------CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH
Q 006969 232 DRKFLYEILGEVIK-VGATTLNI--P--------DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 300 (623)
Q Consensus 232 d~e~l~~~~~~~~~-aGa~~I~l--~--------DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl 300 (623)
+++.+.+.++.+.+ +|+|.|.| . |+.| ..|..+.++++.+++.+. ++|.+..--+..-...-+.
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g-~~~~~~~eii~~v~~~~~----~pv~vk~~~~~~~~~~~a~ 183 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFG-TDPEVAAALVKACKAVSK----VPLYVKLSPNVTDIVPIAK 183 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGG-GCHHHHHHHHHHHHHHCS----SCEEEEECSCSSCSHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhc-CCHHHHHHHHHHHHHhcC----CCEEEEECCChHHHHHHHH
Confidence 56777788888877 88886644 2 3333 268888999999999863 4677655433322233356
Q ss_pred HHHHhCCCEEEecc
Q 006969 301 AGACAGARQVEVTI 314 (623)
Q Consensus 301 aAv~aGA~~Vd~Tv 314 (623)
.+.++|++.|.++=
T Consensus 184 ~l~~~G~d~i~v~~ 197 (311)
T 1ep3_A 184 AVEAAGADGLTMIN 197 (311)
T ss_dssp HHHHTTCSEEEECC
T ss_pred HHHHcCCCEEEEeC
Confidence 77889999998853
No 328
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=74.45 E-value=25 Score=35.38 Aligned_cols=196 Identities=11% Similarity=0.074 Sum_probs=105.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChh-HHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 175 (623)
.|-.+-...+-+.+.+.|++.+-. ....+++ +.+.++.+... .++ |+ |. +..... +..++.+...
T Consensus 81 ~~~~~~~~gi~~~a~~~g~~~~~~-~~~~~~~~~~~~i~~l~~~---~vd---Gi---Ii-~~~~~~---~~~~~~l~~~ 146 (344)
T 3kjx_A 81 MVFPEVLTGINQVLEDTELQPVVG-VTDYLPEKEEKVLYEMLSW---RPS---GV---II-AGLEHS---EAARAMLDAA 146 (344)
T ss_dssp SSHHHHHHHHHHHHTSSSSEEEEE-ECTTCHHHHHHHHHHHHTT---CCS---EE---EE-ECSCCC---HHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEE-eCCCCHHHHHHHHHHHHhC---CCC---EE---EE-ECCCCC---HHHHHHHHhC
Confidence 455666777888889999987543 3333333 33455544432 111 21 21 211111 1234445567
Q ss_pred CCCEEEEEec-CCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE-cccC-CCCCCHHHHHHHHHHHHHcCCcE--
Q 006969 176 KRPRIHTFIA-TSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPED-AGRSDRKFLYEILGEVIKVGATT-- 250 (623)
Q Consensus 176 ~~~~v~i~~~-~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f-~~ed-a~r~d~e~l~~~~~~~~~aGa~~-- 250 (623)
++|.|.+... ..+.. .....+ +.+....+++++.++|.+.+.| +... ......+.+.-+.+++.+.|...
T Consensus 147 ~iPvV~i~~~~~~~~~--~~V~~D---~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~ 221 (344)
T 3kjx_A 147 GIPVVEIMDSDGKPVD--AMVGIS---HRRAGREMAQAILKAGYRRIGFMGTKMPLDYRARKRFEGFTEVLGKNGVEIED 221 (344)
T ss_dssp SSCEEEEEECSSCCSS--EEEEEC---HHHHHHHHHHHHHHHTCCSCCEEESSTTTCHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred CCCEEEEeCCCCCCCC--CEEEEC---cHHHHHHHHHHHHHCCCCeEEEEecCcccCccHHHHHHHHHHHHHHcCCCCCh
Confidence 8998876321 11100 012223 3455667788888888875544 2211 12233456666777888888542
Q ss_pred EeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE-EEeccCCcc
Q 006969 251 LNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ-VEVTINGIG 318 (623)
Q Consensus 251 I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~-Vd~Tv~GlG 318 (623)
..+. .|-..++.-++.+..+.+..|..+ .+=|.|| .+|+.-..++-++|.+. =|.+|.|++
T Consensus 222 ~~~~--~~~~~~~~~~~~~~~ll~~~~~~~----ai~~~nd-~~A~g~~~al~~~g~~vP~disvvg~D 283 (344)
T 3kjx_A 222 REFY--SGGSALAKGREMTQAMLERSPDLD----FLYYSND-MIAAGGLLYLLEQGIDIPGQIGLAGFN 283 (344)
T ss_dssp EEEC--SSCCCHHHHHHHHHHHHHHSTTCC----EEEESSH-HHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred heEE--eCCCCHHHHHHHHHHHHhcCCCCC----EEEECCH-HHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 1221 244566777777777666655432 4447776 45555555666788653 266777776
No 329
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=74.42 E-value=33 Score=34.80 Aligned_cols=64 Identities=19% Similarity=0.296 Sum_probs=27.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHH
Q 006969 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGK 267 (623)
Q Consensus 197 ~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~ 267 (623)
++.+++++.+ +.+++.|...|.|..-.....+.+++.++++.+.+.|. .|. =|.|..+++.+..
T Consensus 84 ls~eei~~~i----~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~-~i~--~s~g~l~~e~l~~ 147 (348)
T 3iix_A 84 MTPEEIVERA----RLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKMGV-AVT--LSLGEWPREYYEK 147 (348)
T ss_dssp CCHHHHHHHH----HHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTTSC-EEE--EECCCCCHHHHHH
T ss_pred CCHHHHHHHH----HHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhcCc-eEE--EecCCCCHHHHHH
Confidence 4555544433 33444555545442110011233566666666655532 122 2445555544333
No 330
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=74.23 E-value=38 Score=34.19 Aligned_cols=137 Identities=16% Similarity=0.173 Sum_probs=80.3
Q ss_pred HHHHHHhHcCCCEEEEec---------CCCCh----hHHHHHHHHHHHhccccccCCCccceEEeecc---cchhhH-HH
Q 006969 105 DIARQLAKLGVDIIEAGF---------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICGLSR---CNERDI-KT 167 (623)
Q Consensus 105 ~Ia~~L~~~Gvd~IEvGf---------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r---~~~~dI-~~ 167 (623)
.-|+.++++|||.|=+|. |...+ +....++.+++-.++ .|.++.+-- ...+++ +.
T Consensus 40 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~--------~~vvaD~pfgsY~s~~~a~~~ 111 (275)
T 3vav_A 40 SFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPR--------ALIVADLPFGTYGTPADAFAS 111 (275)
T ss_dssp HHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCS--------SEEEEECCTTSCSSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCC--------CCEEEecCCCCCCCHHHHHHH
Confidence 357888999999998873 33222 223445666653321 133333221 244443 33
Q ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE----Eccc-----C----CCCCC--
Q 006969 168 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE----FSPE-----D----AGRSD-- 232 (623)
Q Consensus 168 a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~----f~~e-----d----a~r~d-- 232 (623)
+.+.++ +|+..|++-...+ ..+.|+.+.+.|++ |+ +.|. . -+|++
T Consensus 112 a~rl~k-aGa~aVklEdg~~------------------~~~~i~~l~~~GIp-v~gHlgltPq~~~~~gg~~vqgrt~~~ 171 (275)
T 3vav_A 112 AVKLMR-AGAQMVKFEGGEW------------------LAETVRFLVERAVP-VCAHVGLTPQSVHAFGGFKVQGKTEAG 171 (275)
T ss_dssp HHHHHH-TTCSEEEEECCGG------------------GHHHHHHHHHTTCC-EEEEEESCGGGHHHHC---CCCCSHHH
T ss_pred HHHHHH-cCCCEEEECCchh------------------HHHHHHHHHHCCCC-EEEecCCCceEEeccCCeEEEcCCHHH
Confidence 444444 5999999876532 23566777788987 43 1221 1 23553
Q ss_pred HHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCC
Q 006969 233 RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP 277 (623)
Q Consensus 233 ~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~ 277 (623)
.+.+++=++++.++||+.|.+. +.|.+ +++.+.+.++
T Consensus 172 a~~~i~rA~a~~eAGA~~ivlE-----~vp~~---~a~~It~~l~ 208 (275)
T 3vav_A 172 AAQLLRDARAVEEAGAQLIVLE-----AVPTL---VAAEVTRELS 208 (275)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEE-----SCCHH---HHHHHHHHCS
T ss_pred HHHHHHHHHHHHHcCCCEEEec-----CCCHH---HHHHHHHhCC
Confidence 3677777888899999999986 34554 4555555553
No 331
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=73.99 E-value=44 Score=31.79 Aligned_cols=168 Identities=14% Similarity=0.072 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
..+.++-+++++.+.. .++.+++|.+---..-.+.++.|.+..++. +.+.-+-... .-....+.+..+|
T Consensus 12 ~~~~~~~~~~~~~~~~-~v~~~kv~~~~f~~~G~~~i~~l~~~~p~~--------~v~lD~kl~d--ip~t~~~~~~~~G 80 (216)
T 1q6o_A 12 NQTMDSAYETTRLIAE-EVDIIEVGTILCVGEGVRAVRDLKALYPHK--------IVLADAKIAD--AGKILSRMCFEAN 80 (216)
T ss_dssp CSSHHHHHHHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHHHCTTS--------EEEEEEEECS--CHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhcc-cCCEEEECHHHHHHhCHHHHHHHHHhCCCC--------eEEEEEEecc--cHHHHHHHHHhCC
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc-CCCCCCHHHHHHHHHHHHHcCCcEEee--
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-DAGRSDRKFLYEILGEVIKVGATTLNI-- 253 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e-da~r~d~e~l~~~~~~~~~aGa~~I~l-- 253 (623)
++.|.+-....+ +++.++++++++.|.. +....- -.+ ..-.+.+.+.|.+.+.+
T Consensus 81 ad~itvh~~~g~---------------~~l~~~~~~~~~~g~~-~~~~ll~~~t-------~~~~~~l~~~~~~~~vl~~ 137 (216)
T 1q6o_A 81 ADWVTVICCADI---------------NTAKGALDVAKEFNGD-VQIELTGYWT-------WEQAQQWRDAGIGQVVYHR 137 (216)
T ss_dssp CSEEEEETTSCH---------------HHHHHHHHHHHHTTCE-EEEEECSCCC-------HHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEeccCCH---------------HHHHHHHHHHHHcCCC-ceeeeeeCCC-------hhhHHHHHhcCcHHHHHHH
Q ss_pred ------cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 254 ------PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 254 ------~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
+-..| .|+++..+-+.+...+| |.+ +-|....|.-.++++||+.|
T Consensus 138 a~~~~~~G~~g--~~~~i~~lr~~~~~~~~------i~v----~GGI~~~~~~~~~~aGad~i 188 (216)
T 1q6o_A 138 SRDAQAAGVAW--GEADITAIKRLSDMGFK------VTV----TGGLALEDLPLFKGIPIHVF 188 (216)
T ss_dssp CHHHHHTTCCC--CHHHHHHHHHHHHTTCE------EEE----ESSCCGGGGGGGTTSCCSEE
T ss_pred HHHHHhcCCCC--CHHHHHHHHHhcCCCCc------EEE----ECCcChhhHHHHHHcCCCEE
No 332
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=73.85 E-value=59 Score=32.46 Aligned_cols=103 Identities=18% Similarity=0.112 Sum_probs=64.0
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeecCccccc---CHHHHHHHHHHHHHhCC--CC-cceeEEEeecCCcchHHHHHHHHH
Q 006969 230 RSDRKFLYEILGEVIKVGATTLNIPDTVGIT---MPTEFGKLIADIKANTP--GI-ENVVISTHCQNDLGLSTANTIAGA 303 (623)
Q Consensus 230 r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~---~P~~v~~li~~l~~~~~--~~-~~v~i~~H~HND~GlAvANslaAv 303 (623)
..+.+--..-++.+++.||+.|-+.=-.|.+ .-..+.+-|+.+++..+ +. -+++|+.-.=+|.-.=..-+..|+
T Consensus 81 ~~~~~~Kv~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~ 160 (260)
T 1p1x_A 81 NDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISI 160 (260)
T ss_dssp CSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHH
Confidence 4555555555667777888887766666633 34556666666665432 11 134555544455543345677899
Q ss_pred HhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 304 CAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 304 ~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
++||+.|-+|- |.+ +|++.+|.+....+.
T Consensus 161 eaGADfVKTST-Gf~--~~gAt~e~v~lm~~~ 189 (260)
T 1p1x_A 161 KAGADFIKTST-GKV--AVNATPESARIMMEV 189 (260)
T ss_dssp HTTCSEEECCC-SCS--SCCCCHHHHHHHHHH
T ss_pred HhCCCEEEeCC-CCC--CCCCCHHHHHHHHHH
Confidence 99999999885 222 488999977655544
No 333
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=73.62 E-value=10 Score=39.63 Aligned_cols=69 Identities=16% Similarity=0.221 Sum_probs=49.3
Q ss_pred HHHHHHHHc--CCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccC
Q 006969 238 EILGEVIKV--GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 315 (623)
Q Consensus 238 ~~~~~~~~a--Ga~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~ 315 (623)
+.++.+.+. |++.+.+-=+.| .|..+.+.|+++++.+|+ ++|.+.. .+....+..|+++||+.|.++..
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g--~~~~~~~~i~~lr~~~~~---~~vi~g~----v~t~e~A~~a~~aGaD~I~v~~g 191 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANG--YSEHFVEFVKDVRKRFPQ---HTIMAGN----VVTGEMVEELILSGADIIKVGIG 191 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCT--TBHHHHHHHHHHHHHCTT---SEEEEEE----ECSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHhccCCCCEEEEEecCC--CcHHHHHHHHHHHHhcCC---CeEEEEe----CCCHHHHHHHHHhCCCEEEECCC
Confidence 445566665 888776532334 466788899999999864 5666542 44567888999999999999743
No 334
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=73.53 E-value=48 Score=33.62 Aligned_cols=148 Identities=14% Similarity=0.128 Sum_probs=88.6
Q ss_pred HHHHhHcCCCEEEEecCCCCh-----------------hHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHH
Q 006969 107 ARQLAKLGVDIIEAGFPAASK-----------------EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAW 169 (623)
Q Consensus 107 a~~L~~~Gvd~IEvGfP~~s~-----------------~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~ 169 (623)
.+.|.++|+.-+ +=||..+- ++.+.++...+. ++....|++ +.++.....
T Consensus 114 Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~---------gL~Ti~~v~---~~eeA~amA 180 (286)
T 2p10_A 114 LRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKL---------DLLTTPYVF---SPEDAVAMA 180 (286)
T ss_dssp HHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHT---------TCEECCEEC---SHHHHHHHH
T ss_pred HHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHC---------CCeEEEecC---CHHHHHHHH
Confidence 399999999999 88983321 123444443332 344444443 345554444
Q ss_pred HHHhcCCCCEEEEEecCCH-HHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCC
Q 006969 170 EAVKYAKRPRIHTFIATSG-IHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGA 248 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd-~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa 248 (623)
+ +|.+.|.+-.+... --+=..-..|.++..+.+.+.++.+++..-+ |.+-+.-+.=++++.+..+++. -.|+
T Consensus 181 ~----agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpd-vivLc~gGpIstpeDv~~~l~~--t~G~ 253 (286)
T 2p10_A 181 K----AGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDD-IIILSHGGPIANPEDARFILDS--CQGC 253 (286)
T ss_dssp H----HTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSC-CEEEEESTTCCSHHHHHHHHHH--CTTC
T ss_pred H----cCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCC-cEEEecCCCCCCHHHHHHHHhc--CCCc
Confidence 4 38888877665211 0111233468888888888999999888654 4332212345778877666543 1288
Q ss_pred cEEeecCcccccCHHH-HHHHHHHHHH
Q 006969 249 TTLNIPDTVGITMPTE-FGKLIADIKA 274 (623)
Q Consensus 249 ~~I~l~DTvG~~~P~~-v~~li~~l~~ 274 (623)
+-+..+-++-.+.|++ +.++++.++.
T Consensus 254 ~G~~gASsier~p~e~ai~~~~~~fk~ 280 (286)
T 2p10_A 254 HGFYGASSMERLPAEEAIRSQTLAFKA 280 (286)
T ss_dssp CEEEESHHHHHHHHHHHHHHHHHHHHT
T ss_pred cEEEeehhhhcCCHHHHHHHHHHHHHh
Confidence 9999888888777654 5667777765
No 335
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=73.47 E-value=26 Score=36.84 Aligned_cols=80 Identities=9% Similarity=-0.067 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHcCCcEEee-------------------cCcccccCHH---HHHHHHHHHHHhCCCCcceeEEEeecCC
Q 006969 234 KFLYEILGEVIKVGATTLNI-------------------PDTVGITMPT---EFGKLIADIKANTPGIENVVISTHCQND 291 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l-------------------~DTvG~~~P~---~v~~li~~l~~~~~~~~~v~i~~H~HND 291 (623)
+.+.+.++.+.++|.|.|-| .|-.|...-. .+.++|+.+|+.++.. .+.+-+..++.
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~v~vrls~~~~ 244 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE-RVGIRLTPFLE 244 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-cEEEEeccccc
Confidence 45567777788999998877 2555655433 3667889999988631 23333333321
Q ss_pred c-----ch----HHHHHHHHHHhCCCEEEecc
Q 006969 292 L-----GL----STANTIAGACAGARQVEVTI 314 (623)
Q Consensus 292 ~-----Gl----AvANslaAv~aGA~~Vd~Tv 314 (623)
+ |. ++.-+...-++|++.|+++-
T Consensus 245 ~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~ 276 (377)
T 2r14_A 245 LFGLTDDEPEAMAFYLAGELDRRGLAYLHFNE 276 (377)
T ss_dssp CTTCCCSCHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 1 22 23334455578999999865
No 336
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=73.41 E-value=69 Score=33.39 Aligned_cols=190 Identities=11% Similarity=0.028 Sum_probs=101.0
Q ss_pred HHHHHHHhHcCCCEEEEec--CC--C---------------------ChhHHHHHHHHHHHhccccccCCCccceEEeec
Q 006969 104 LDIARQLAKLGVDIIEAGF--PA--A---------------------SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS 158 (623)
Q Consensus 104 l~Ia~~L~~~Gvd~IEvGf--P~--~---------------------s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~ 158 (623)
.+..+.|..+|+-.||+|. |. . ++.-..+++++.+. ... . . .|.+..+.
T Consensus 61 ~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~~-~~~-~---~-~pvivsI~ 134 (354)
T 4ef8_A 61 TEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYAAEQ-HDY-G---K-KPLFLSMS 134 (354)
T ss_dssp HHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHHHHT-CCT-T---T-CCEEEEEC
T ss_pred HHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCHHHHHHHHHHH-hhc-C---C-CcEEEEec
Confidence 3557888999999999983 11 0 11112344455432 111 0 1 24443332
Q ss_pred ccchhhHHHHHHHHh---cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-eEEEcccCCCCCCH
Q 006969 159 RCNERDIKTAWEAVK---YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDAGRSDR 233 (623)
Q Consensus 159 r~~~~dI~~a~eal~---~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~-~V~f~~eda~r~d~ 233 (623)
=.+.+|...+++.+. ..+.+.|.+-++.--..-...|..+++. +.+.++.+++. .+. .|-..| + .|.
T Consensus 135 G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~----~~~il~av~~~~~~PV~vKi~p-~---~d~ 206 (354)
T 4ef8_A 135 GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDA----MRQCLTAVSEVYPHSFGVKMPP-Y---FDF 206 (354)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHH----HHHHHHHHHHHCCSCEEEEECC-C---CSH
T ss_pred cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHH----HHHHHHHHHHhhCCCeEEEecC-C---CCH
Confidence 235677666655554 3467777776553221101112223333 33444444443 233 233466 2 356
Q ss_pred HHHHHHHHHHHHcC-CcEEeecCccc---------------------ccCH----HHHHHHHHHHHHhCCCCcceeEEEe
Q 006969 234 KFLYEILGEVIKVG-ATTLNIPDTVG---------------------ITMP----TEFGKLIADIKANTPGIENVVISTH 287 (623)
Q Consensus 234 e~l~~~~~~~~~aG-a~~I~l~DTvG---------------------~~~P----~~v~~li~~l~~~~~~~~~v~i~~H 287 (623)
+.+.++++.+.++| ++.|.+-.|.| .+.. ..-.++|..+++..+. ++|..=
T Consensus 207 ~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~---ipII~~ 283 (354)
T 4ef8_A 207 AHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPG---KLIFGC 283 (354)
T ss_dssp HHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTT---SEEEEE
T ss_pred HHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCC---CCEEEE
Confidence 77888888888998 99988755442 1111 2345678888887653 455432
Q ss_pred ecCCcchHHHHHHHHHHhCCCEEEec
Q 006969 288 CQNDLGLSTANTIAGACAGARQVEVT 313 (623)
Q Consensus 288 ~HND~GlAvANslaAv~aGA~~Vd~T 313 (623)
.==.. ...++.++.+||+.|...
T Consensus 284 GGI~s---~~da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 284 GGVYT---GEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp SCCCS---HHHHHHHHHHTEEEEEEC
T ss_pred CCcCC---HHHHHHHHHcCCCEEEEh
Confidence 21111 346677788999888653
No 337
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=73.12 E-value=51 Score=31.88 Aligned_cols=81 Identities=14% Similarity=0.012 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHHHhCCC
Q 006969 233 RKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGACAGAR 308 (623)
Q Consensus 233 ~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~-HND~GlAvANslaAv~aGA~ 308 (623)
.+....-++.+.+.|++.|-+.=-.|. ..+..+.+.++.+++..++. -+.+.+.. --+..-...-+..+.++||+
T Consensus 69 ~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~pv-~vKvi~e~~~l~~~~~~~~a~~a~eaGad 147 (225)
T 1mzh_A 69 TSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSA-VHKVIVETPYLNEEEIKKAVEICIEAGAD 147 (225)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTTS-EEEEECCGGGCCHHHHHHHHHHHHHHTCS
T ss_pred hhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcCc-eEEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 343444457788999998875333344 25677888899999877522 12232221 11222244557788899999
Q ss_pred EEEecc
Q 006969 309 QVEVTI 314 (623)
Q Consensus 309 ~Vd~Tv 314 (623)
.|.++-
T Consensus 148 ~I~tst 153 (225)
T 1mzh_A 148 FIKTST 153 (225)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 996554
No 338
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=73.07 E-value=81 Score=33.03 Aligned_cols=164 Identities=16% Similarity=0.072 Sum_probs=91.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccce-EEeecccchhhHHHHHHHHhcCC
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPV-ICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~-i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
.+.++-.+-++.+.+.|++.|-+=.......|.+.++.+.+.++..+ ... +=+-.+...++..+..+.+...+
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v~avR~a~g~~~------~l~~vDan~~~~~~~A~~~~~~l~~~~ 214 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLYVGKNLDADEEFLSRVKEEFGSRV------RIKSYDFSHLLNWKDAHRAIKRLTKYD 214 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHHGGGC------EEEEEECTTCSCHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeCCCHHHHHHHHHHHHHHcCCCC------cEEEecCCCCcCHHHHHHHHHHHHhcC
Confidence 36777788888888999999987433222457788888888765421 112 22223334455444556666667
Q ss_pred C--CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcC-CcEEee
Q 006969 177 R--PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG-ATTLNI 253 (623)
Q Consensus 177 ~--~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aG-a~~I~l 253 (623)
+ ..|.=.++..+ ++ .+.+..+..++. | |.+-.+++.+.+++ +.| ++.|+
T Consensus 215 i~~~~iEqP~~~~d--------------~~---~~~~l~~~~~iP-I-----dE~~~~~~~~~~~~----~~~~~d~v~- 266 (391)
T 3gd6_A 215 LGLEMIESPAPRND--------------FD---GLYQLRLKTDYP-I-----SEHVWSFKQQQEMI----KKDAIDIFN- 266 (391)
T ss_dssp SSCCEEECCSCTTC--------------HH---HHHHHHHHCSSC-E-----EEECCCHHHHHHHH----HHTCCSEEE-
T ss_pred CCcceecCCCChhh--------------HH---HHHHHHHHcCCC-c-----CCCCCCHHHHHHHH----HcCCCCEEE-
Confidence 6 55542222111 11 222233344554 4 44456665554443 445 55554
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH
Q 006969 254 PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 300 (623)
Q Consensus 254 ~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl 300 (623)
.|..=+.-+.+..++....+++ ++++.+||-...++++|-++
T Consensus 267 ~k~~~~GGit~~~~ia~~A~~~-----gi~~~~~~~~es~i~~aa~~ 308 (391)
T 3gd6_A 267 ISPVFIGGLTSAKKAAYAAEVA-----SKDVVLGTTQELSVGTAAMA 308 (391)
T ss_dssp ECHHHHTSHHHHHHHHHHHHHT-----TCEEEECCCCCCHHHHHHHH
T ss_pred ECchhcCCHHHHHHHHHHHHHc-----CCEEEecCCCccHHHHHHHH
Confidence 4555555566666666666654 25677776556666665544
No 339
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=72.88 E-value=35 Score=37.15 Aligned_cols=132 Identities=17% Similarity=0.089 Sum_probs=75.0
Q ss_pred HHHHHHHHHHhHcCCCEEEEecCC-CChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCCE
Q 006969 101 KEKLDIARQLAKLGVDIIEAGFPA-ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPR 179 (623)
Q Consensus 101 e~Kl~Ia~~L~~~Gvd~IEvGfP~-~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~ 179 (623)
++-.+.++.|.++|+|.|++.... .++.-.+.++.+.+..++ .+.+.+.. ...++.+.+. .+|++.
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~--------~~Vi~g~v-~t~e~a~~l~----~aGaD~ 294 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPD--------VQVIGGNI-ATAEAAKALA----EAGADA 294 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTT--------SEEEEEEE-CSHHHHHHHH----HTTCSE
T ss_pred cchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCC--------ceEEEeee-CcHHHHHHHH----HcCCCE
Confidence 345677889999999999997532 233445788888775421 14444432 2344444443 359998
Q ss_pred EEEEe-cCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 006969 180 IHTFI-ATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 254 (623)
Q Consensus 180 v~i~~-~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~ 254 (623)
|.+-. +.|..--+...+.... .+..+.+.++.+++.++. |.- +++=.+++.+.+.+ ++||+.+.+.
T Consensus 295 I~vg~g~Gs~~~t~~~~g~g~p-~~~~l~~v~~~~~~~~iP-VIa---~GGI~~~~di~kal----~~GAd~V~vG 361 (490)
T 4avf_A 295 VKVGIGPGSICTTRIVAGVGVP-QISAIANVAAALEGTGVP-LIA---DGGIRFSGDLAKAM----VAGAYCVMMG 361 (490)
T ss_dssp EEECSSCSTTCHHHHHTCBCCC-HHHHHHHHHHHHTTTTCC-EEE---ESCCCSHHHHHHHH----HHTCSEEEEC
T ss_pred EEECCCCCcCCCccccCCCCcc-HHHHHHHHHHHhccCCCc-EEE---eCCCCCHHHHHHHH----HcCCCeeeec
Confidence 87621 2221111122232211 245556666777666765 432 45556666665543 4699888764
No 340
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=72.87 E-value=73 Score=31.10 Aligned_cols=204 Identities=10% Similarity=0.033 Sum_probs=118.4
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEec---CCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhh------HH---
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGF---PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD------IK--- 166 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGf---P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d------I~--- 166 (623)
+.++-+.-++.+.+.|.|.||.=. ... +.+.+..+...+.... +-.|.|.. .|...++ -+
T Consensus 15 ~~~e~~~~~~~~~~~~~D~vElRvD~l~~~---~~~~v~~~~~~lr~~~----~~~PiI~T-~R~~~eGG~~~~~~~~~~ 86 (238)
T 1sfl_A 15 SIEETLIQKINHRIDAIDVLELRIDQFENV---TVDQVAEMITKLKVMQ----DSFKLLVT-YRTKLQGGYGQFTNDSYL 86 (238)
T ss_dssp ---CHHHHHHHHTTTTCSEEEEECTTSTTC---CHHHHHHHHHHHC-------CCSEEEEE-CCBGGGTSCBCCCHHHHH
T ss_pred CHHHHHHHHHHhhhcCCCEEEEEecccccC---CHHHHHHHHHHHHHhc----cCCCEEEE-eeccccCCCCCCCHHHHH
Confidence 445666667778889999999942 211 2344443333332211 11254543 3443321 11
Q ss_pred HHHHHHhcC-CCCEEEEEecC--CHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCC-HHHHHHHHHH
Q 006969 167 TAWEAVKYA-KRPRIHTFIAT--SGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSD-RKFLYEILGE 242 (623)
Q Consensus 167 ~a~eal~~a-~~~~v~i~~~~--Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d-~e~l~~~~~~ 242 (623)
..++.+... +.+.|.+-... .+ +.+.+.++.+++.|.+ |..|--|...+. .+.+.+.++.
T Consensus 87 ~ll~~~~~~~~~d~iDvEl~~~~~~---------------~~~~~l~~~~~~~~~k-vI~S~Hdf~~tp~~~el~~~~~~ 150 (238)
T 1sfl_A 87 NLISDLANINGIDMIDIEWQADIDI---------------EKHQRIITHLQQYNKE-VIISHHNFESTPPLDELQFIFFK 150 (238)
T ss_dssp HHHHHGGGCTTCCEEEEECCTTSCH---------------HHHHHHHHHHHHTTCE-EEEEEEESSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEEccCCCCh---------------HHHHHHHHHHHhcCCE-EEEEecCCCCCcCHHHHHHHHHH
Confidence 123333333 57788775543 22 2334677888888875 666555544443 5788899999
Q ss_pred HHHcCCcEEeecCcccccCHHHHHHHHHHHHHh--CCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCc
Q 006969 243 VIKVGATTLNIPDTVGITMPTEFGKLIADIKAN--TPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGER 320 (623)
Q Consensus 243 ~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~--~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGER 320 (623)
+.+.|||.+-|+=+. ..+.++.++.....+. .+ +.|+-. =|--.+|.-.=+.+-..|--...+++.. ...
T Consensus 151 ~~~~gaDivKia~~a--~~~~D~l~ll~~~~~~~~~~---~~P~I~--~~MG~~G~~SRi~~~~~GS~~tf~~l~~-~sA 222 (238)
T 1sfl_A 151 MQKFNPEYVKLAVMP--HNKNDVLNLLQAMSTFSDTM---DCKVVG--ISMSKLGLISRTAQGVFGGALTYGCIGE-PQA 222 (238)
T ss_dssp HHTTCCSEEEEEECC--SSHHHHHHHHHHHHHHHHHC---SSEEEE--EECTGGGHHHHHTGGGGTBCEEEEBSSC-CSS
T ss_pred HHHcCCCEEEEEecC--CCHHHHHHHHHHHHHHhhcC---CCCEEE--EECCCCchHHHHHHHHhCCCeeecCCCC-CCC
Confidence 999999999987553 3466777776654432 12 234433 2333345556666667788888888743 557
Q ss_pred cCcccHHHHHHHHH
Q 006969 321 AGNASLEEVVMAFK 334 (623)
Q Consensus 321 aGNa~lEevv~~L~ 334 (623)
.|..+++++...|+
T Consensus 223 PGQl~~~el~~~l~ 236 (238)
T 1sfl_A 223 PGQIDVTDLKAQVT 236 (238)
T ss_dssp TTCCBHHHHHHHHT
T ss_pred CCCCCHHHHHHHHH
Confidence 89999999876664
No 341
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=72.59 E-value=77 Score=31.31 Aligned_cols=200 Identities=14% Similarity=0.089 Sum_probs=93.8
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCCCChh-HHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
|-......+-+.+.+.|++.+-.+.....+. ..+.++.+... .+. .|.. .......+...++.++..+
T Consensus 17 ~~~~~~~g~~~~~~~~g~~~~~~~~~~~d~~~q~~~i~~li~~---~vd-------giii-~~~~~~~~~~~~~~a~~~g 85 (316)
T 1tjy_A 17 FFTSGGNGAQEAGKALGIDVTYDGPTEPSVSGQVQLVNNFVNQ---GYD-------AIIV-SAVSPDGLCPALKRAMQRG 85 (316)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEECCCSSCCHHHHHHHHHHHHHT---TCS-------EEEE-CCSSSSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCCEEEEECCCCCCHHHHHHHHHHHHHc---CCC-------EEEE-eCCCHHHHHHHHHHHHHCc
Confidence 4445566677778889986653321122222 23455555442 111 1111 1112222233444445568
Q ss_pred CCEEEEEecCCHHHHHHHh-CCCHHHHHHHHHHHHHHHHH---cCCCeEEE-cccCCCCCCHHHHHHHHHHHHHcCCcEE
Q 006969 177 RPRIHTFIATSGIHMEHKL-RKTKQQVVEIARSMVKFARS---LGCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGATTL 251 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l-~~t~ee~l~~~~~~v~~ak~---~G~~~V~f-~~eda~r~d~e~l~~~~~~~~~aGa~~I 251 (623)
++.|.+--.........-. ..+..+ ....+++++.+ .|...+.| ..........++..-+.+.+.+.+...-
T Consensus 86 ipvV~~d~~~~~~~~~~~v~~~D~~~---~g~~~~~~L~~~~~~g~~~i~~i~g~~~~~~~~~r~~g~~~~l~~~~~~~~ 162 (316)
T 1tjy_A 86 VKILTWDSDTKPECRSYYINQGTPKQ---LGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQEHPGWE 162 (316)
T ss_dssp CEEEEESSCCCGGGCSEEEESCCHHH---HHHHHHHHHHHHHCSSSEEEEEEESCSSCHHHHHHHHHHHHHHHHHCTTEE
T ss_pred CEEEEecCCCCCCCceEEEecCCHHH---HHHHHHHHHHHHcCCCCCEEEEEEcCCCChhHHHHHHHHHHHHHhhCCCcE
Confidence 8877653222211000012 344443 34445555555 45544544 3211111223444444555555543321
Q ss_pred eecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCcc
Q 006969 252 NIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (623)
Q Consensus 252 ~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlG 318 (623)
.+....+-..+....+.+..+.+..|.++ .+-|.|| ++|.+-..+.-++| + =|.+|.|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~----aI~~~nD-~~A~g~~~al~~~G-~-~dv~VvG~D 222 (316)
T 1tjy_A 163 IVTTQFGYNDATKSLQTAEGIIKAYPDLD----AIIAPDA-NALPAAAQAAENLK-R-NNLAIVGFS 222 (316)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHCSSCC----EEEECST-THHHHHHHHHHHTT-C-CSCEEEEBC
T ss_pred EEEeccCCCCHHHHHHHHHHHHHhCCCCC----EEEECCC-ccHHHHHHHHHHcC-C-CCEEEEEeC
Confidence 11122345577777787777776666432 5557776 34544333444568 5 456787765
No 342
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=72.52 E-value=36 Score=33.23 Aligned_cols=259 Identities=8% Similarity=-0.027 Sum_probs=123.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCC-CCh-hHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPA-ASK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~-~s~-~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
.|-.+-...+-+.+.+.|++.+-..... .++ ++.+.++.+... .++ + .|. .......++..++.+..
T Consensus 16 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~---~vd---g---iii--~~~~~~~~~~~~~~~~~ 84 (297)
T 3rot_A 16 PYWTSLFQGAKKAAEELKVDLQILAPPGANDVPKQVQFIESALAT---YPS---G---IAT--TIPSDTAFSKSLQRANK 84 (297)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHT---CCS---E---EEE--CCCCSSTTHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHc---CCC---E---EEE--eCCCHHHHHHHHHHHHH
Confidence 3455666777788888999876553221 123 234555555542 111 1 111 11122333334444445
Q ss_pred CCCCEEEEEecCCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHcC--CCeEEE-cccCCCCCCHHHHHHHHHHHHHcCC
Q 006969 175 AKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLG--CDDVEF-SPEDAGRSDRKFLYEILGEVIKVGA 248 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~---h~~~~l~~t~ee~l~~~~~~v~~ak~~G--~~~V~f-~~eda~r~d~e~l~~~~~~~~~aGa 248 (623)
.|++.|.+-....+. ......+.+ +.+....+++++.+.| ...+.| ..........+.+.-+.+++.+.|.
T Consensus 85 ~giPvV~~~~~~~~~~~~~~~~~V~~D---~~~~g~~a~~~l~~~g~~~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~g~ 161 (297)
T 3rot_A 85 LNIPVIAVDTRPKDKTKNPYLVFLGSD---NLLAGKKLGEKALELTPSAKRALVLNPQPGHIGLEKRAYGIKTILQDKGI 161 (297)
T ss_dssp HTCCEEEESCCCSCTTTSCCSCEEECC---HHHHHHHHHHHHHHHCTTCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEcCCCccccccCcceEEccC---hHHHHHHHHHHHHHhcCCCceEEEEeCCCCcHHHHHHHHHHHHHHHhcCC
Confidence 588887654332210 000011222 3455667888888888 665554 2222233334566667777888888
Q ss_pred cEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCc-chHHHHHHHHHHhCCCE--EEeccCCccCccCccc
Q 006969 249 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDL-GLSTANTIAGACAGARQ--VEVTINGIGERAGNAS 325 (623)
Q Consensus 249 ~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~-GlAvANslaAv~aGA~~--Vd~Tv~GlGERaGNa~ 325 (623)
..+.+. +...+....+.+..+.+..|+++ .+=|.||. .+++..++. ++|-+. =|.+|.|++. .+
T Consensus 162 ~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d~~A~g~~~al~--~~g~~vP~~dv~vig~D~----~~ 228 (297)
T 3rot_A 162 FFEELD---VGTDPNQVQSRVKSYFKIHPETN----IIFCLTSQALDPLGQMLL--HPDRYDFNYQPQVYSFDK----TP 228 (297)
T ss_dssp EEEEEE---CCSCHHHHHHHHHHHHHHCTTCC----EEEESSHHHHHHHHHHHH--SHHHHTCCCCCEEEEECC----CH
T ss_pred eEEEee---cCCChHHHHHHHHHHHHhCCCCC----EEEEcCCcchHHHHHHHH--hcCCccCCCceEEEEeCC----CH
Confidence 766543 34567888888888766666543 44577764 355555543 345321 1566777642 22
Q ss_pred HHHHHHHHHhcccccccccccCCChhHHHH-HHH-HHHHHhCCCCCCCCcccCcchhhcccccccc
Q 006969 326 LEEVVMAFKCRGEHILGGLYTGINTRHIVM-ASK-MVEEYTGLHVQPHKAIVGANAFAHESGIHQD 389 (623)
Q Consensus 326 lEevv~~L~~~~~~~~~G~~t~idl~~L~~-~s~-~v~~~~g~~i~~~~pivG~~aF~h~sGiH~d 389 (623)
. .+..+.. +. .+ ..-..+...+-. +.+ ++..+.|..++. .-.+|-..+.++|-=|.+
T Consensus 229 ~--~~~~i~~-~~-~l--ttv~~~~~~~g~~av~~l~~~i~g~~~~~-~i~~~~~~~~~~~~~~~~ 287 (297)
T 3rot_A 229 N--TVSLIHK-KL-VN--YVMDQQPFLMGYLSITQLVLMNRYQLNPV-NINTAMAENLYFQSHHHH 287 (297)
T ss_dssp H--HHHHHHT-TS-CC--EEECCCHHHHHHHHHHHHHHHHHHCCCCC-CEECCC------------
T ss_pred H--HHHHHHc-CC-ce--EEEecChHHHHHHHHHHHHHHHhCCCCCc-ccccCceEEecchhcccc
Confidence 2 2223332 10 00 012344444432 223 334445555544 445788888887755443
No 343
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=72.50 E-value=27 Score=34.23 Aligned_cols=122 Identities=11% Similarity=0.093 Sum_probs=71.5
Q ss_pred HHHHHHHhHcCCCEEEEec----CCCCh-hHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCC
Q 006969 104 LDIARQLAKLGVDIIEAGF----PAASK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (623)
Q Consensus 104 l~Ia~~L~~~Gvd~IEvGf----P~~s~-~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~ 178 (623)
.+.++.|...|+|.|=.+- ....+ .|....++|.+..+ +|.+. -.+...++++..|.+
T Consensus 56 ~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~~---------iPv~~--------~~~A~~~al~~~g~~ 118 (240)
T 3ixl_A 56 VDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREATG---------LPCTT--------MSTAVLNGLRALGVR 118 (240)
T ss_dssp HHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHS---------SCEEE--------HHHHHHHHHHHTTCS
T ss_pred HHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhccC---------CCEEC--------HHHHHHHHHHHhCCC
Confidence 4448889899999998852 11222 24456667766432 24331 123344556666889
Q ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc------CCCCCCHHHHHHHHHH-H-HHcCCcE
Q 006969 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE------DAGRSDRKFLYEILGE-V-IKVGATT 250 (623)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e------da~r~d~e~l~~~~~~-~-~~aGa~~ 250 (623)
+|.+..+-.. +......++.++.|++.+..... +.++.+++.+.++++. + .+.|++.
T Consensus 119 rvglltpy~~---------------~~~~~~~~~l~~~Giev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ada 183 (240)
T 3ixl_A 119 RVALATAYID---------------DVNERLAAFLAEESLVPTGCRSLGITGVEAMARVDTATLVDLCVRAFEAAPDSDG 183 (240)
T ss_dssp EEEEEESSCH---------------HHHHHHHHHHHHTTCEEEEEEECCCCCHHHHHTCCHHHHHHHHHHHHHTSTTCSE
T ss_pred EEEEEeCChH---------------HHHHHHHHHHHHCCCEEeccccCCCCCcchhhcCCHHHHHHHHHHHhhcCCCCCE
Confidence 9999876321 11223457777889863333221 1335567777777777 5 4557787
Q ss_pred EeecCcc
Q 006969 251 LNIPDTV 257 (623)
Q Consensus 251 I~l~DTv 257 (623)
|.|.-|.
T Consensus 184 ivL~CT~ 190 (240)
T 3ixl_A 184 ILLSSGG 190 (240)
T ss_dssp EEEECTT
T ss_pred EEEeCCC
Confidence 7777554
No 344
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=72.39 E-value=36 Score=32.72 Aligned_cols=198 Identities=12% Similarity=0.035 Sum_probs=101.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChh-HHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 175 (623)
.|-.+-...+-+.+.+.|++.+-... ...++ +.+.++.+.. ..++ | |.... ...+.+...++.++..
T Consensus 14 ~f~~~~~~gi~~~~~~~g~~~~~~~~-~~~~~~~~~~i~~l~~---~~vd---g----iIi~~-~~~~~~~~~~~~~~~~ 81 (271)
T 2dri_A 14 PFFVSLKDGAQKEADKLGYNLVVLDS-QNNPAKELANVQDLTV---RGTK---I----LLINP-TDSDAVGNAVKMANQA 81 (271)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEEEC-TTCHHHHHHHHHHHTT---TTEE---E----EEECC-SSTTTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEeCC-CCCHHHHHHHHHHHHH---cCCC---E----EEEeC-CChHHHHHHHHHHHHC
Confidence 35556667777888899987765432 22222 2233433322 1111 1 21111 2223332334445556
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEE-cccCCCCCCHHHHHHHHHHHHHcCCcEEe
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGATTLN 252 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~--G~~~V~f-~~eda~r~d~e~l~~~~~~~~~aGa~~I~ 252 (623)
++|.|.+-....+.......+.+ +.+....+++++.++ |...+.| +.........+...-+.+++.+.|.....
T Consensus 82 ~iPvV~i~~~~~~~~~~~~V~~D---~~~~g~~a~~~L~~~g~g~~~I~~i~g~~~~~~~~~R~~Gf~~al~~~g~~~~~ 158 (271)
T 2dri_A 82 NIPVITLDRQATKGEVVSHIASD---NVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAHKFNVLA 158 (271)
T ss_dssp TCCEEEESSCCSSSCCSEEEEEC---HHHHHHHHHHHHHHHHCTTCEEEEEECCTTCHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCcEEEecCCCCCCceeEEEecC---hHHHHHHHHHHHHHHcCCCCeEEEEECCCCCccHhHHHHHHHHHHhcCCCEEEE
Confidence 88887653222110000012233 234556677777777 3345554 32122223345566666777778875433
Q ss_pred ecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCcc
Q 006969 253 IPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (623)
Q Consensus 253 l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlG 318 (623)
. -.|-..+..-++.+..+.+..|.+ =.+=|.||. +|++-..++-++|-+ |.+|.|++
T Consensus 159 ~--~~~~~~~~~~~~~~~~ll~~~~~~----~ai~~~nD~-~A~g~~~al~~~g~~--dv~vvGfD 215 (271)
T 2dri_A 159 S--QPADFDRIKGLNVMQNLLTAHPDV----QAVFAQNDE-MALGALRALQTAGKS--DVMVVGFD 215 (271)
T ss_dssp E--EECTTCHHHHHHHHHHHHHHCTTC----CEEEESSHH-HHHHHHHHHHHHTCC--SCEEEEEE
T ss_pred e--cCCCCCHHHHHHHHHHHHHhCCCc----cEEEECCCc-HHHHHHHHHHHcCCC--CcEEEEec
Confidence 2 134456777777777766655543 266688875 444444444556764 78888876
No 345
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=72.29 E-value=19 Score=36.75 Aligned_cols=206 Identities=16% Similarity=0.121 Sum_probs=114.7
Q ss_pred HHHHhHcCCCEEEEec----------CCCCh----hHHHHHHHHHHHhccccccCCCccceEEe----ecccchhhHHHH
Q 006969 107 ARQLAKLGVDIIEAGF----------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKTA 168 (623)
Q Consensus 107 a~~L~~~Gvd~IEvGf----------P~~s~----~d~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~a 168 (623)
++.++++|||.|=+|. |...+ +-...++.|++.... |.++- |+. ....+-+.
T Consensus 30 A~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~---------PviaD~d~Gyg~-~~~~~~~~ 99 (295)
T 1xg4_A 30 ALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSL---------PLLVDADIGFGS-SAFNVART 99 (295)
T ss_dssp HHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCS---------CEEEECTTCSSS-SHHHHHHH
T ss_pred HHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCC---------CEEecCCcccCC-CHHHHHHH
Confidence 6778889999998862 32222 123556666664321 33333 221 34445454
Q ss_pred HHHHhcCCCCEEEEEecCCHH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC-CCCHHHHHHHHHHHH
Q 006969 169 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVI 244 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~Sd~---h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~-r~d~e~l~~~~~~~~ 244 (623)
...+..+|+..|+|-...++- |+.-+-=.+.++..++++.+++....-++ .|.--. |+. ....+.+++-+++..
T Consensus 100 v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~-~i~aRt-da~~~~gl~~ai~ra~ay~ 177 (295)
T 1xg4_A 100 VKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDF-VIMART-DALAVEGLDAAIERAQAYV 177 (295)
T ss_dssp HHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTS-EEEEEE-CCHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCc-EEEEec-HHhhhcCHHHHHHHHHHHH
Confidence 444555799999998776421 11100003566776766665554442232 122111 111 123477888889999
Q ss_pred HcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcc
Q 006969 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNA 324 (623)
Q Consensus 245 ~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa 324 (623)
++|||.|.+. |.-.++++.++.+.+. .| +..-+-..+.... -+.-.--+.|+++|-....+ =|+-+.
T Consensus 178 eAGAd~i~~e---~~~~~~~~~~i~~~~~--iP----~~~N~~~~g~~p~--~~~~eL~~~G~~~v~~~~~~--~~aa~~ 244 (295)
T 1xg4_A 178 EAGAEMLFPE---AITELAMYRQFADAVQ--VP----ILANITEFGATPL--FTTDELRSAHVAMALYPLSA--FRAMNR 244 (295)
T ss_dssp HTTCSEEEET---TCCSHHHHHHHHHHHC--SC----BEEECCSSSSSCC--CCHHHHHHTTCSEEEESSHH--HHHHHH
T ss_pred HcCCCEEEEe---CCCCHHHHHHHHHHcC--CC----EEEEecccCCCCC--CCHHHHHHcCCCEEEEChHH--HHHHHH
Confidence 9999999986 3345677777766663 34 1111111111111 12345556799998554443 377888
Q ss_pred cHHHHHHHHHhcc
Q 006969 325 SLEEVVMAFKCRG 337 (623)
Q Consensus 325 ~lEevv~~L~~~~ 337 (623)
.+++++..|...|
T Consensus 245 a~~~~~~~i~~~g 257 (295)
T 1xg4_A 245 AAEHVYNVLRQEG 257 (295)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhC
Confidence 8888888887765
No 346
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=72.21 E-value=11 Score=37.04 Aligned_cols=115 Identities=7% Similarity=-0.053 Sum_probs=69.0
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc-CC--CCCCH------
Q 006969 163 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-DA--GRSDR------ 233 (623)
Q Consensus 163 ~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e-da--~r~d~------ 233 (623)
.+++..++.++..|.+.|.++.... + ..+.+..+.++++|+....+++. +. ...++
T Consensus 38 ~~~~~~l~~~~~~G~~~vEl~~~~~------------~---~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~ 102 (287)
T 3kws_A 38 ESLNEKLDFMEKLGVVGFEPGGGGL------------A---GRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKEC 102 (287)
T ss_dssp SSHHHHHHHHHHTTCCEEECBSTTC------------G---GGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEecCCch------------H---HHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHH
Confidence 4677788888889999998876521 1 22445667778899863233331 11 12343
Q ss_pred -HHHHHHHHHHHHcCCcEEeecCcccc------cCHHHHHHHHHHHHHhCC--CCcceeEEEeecCCc
Q 006969 234 -KFLYEILGEVIKVGATTLNIPDTVGI------TMPTEFGKLIADIKANTP--GIENVVISTHCQNDL 292 (623)
Q Consensus 234 -e~l~~~~~~~~~aGa~~I~l~DTvG~------~~P~~v~~li~~l~~~~~--~~~~v~i~~H~HND~ 292 (623)
+.+.+.++.+.+.|+..|.+.-..|. ..+..+..+++.+++..+ ...++.|.+|.||..
T Consensus 103 ~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~ 170 (287)
T 3kws_A 103 MDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRK 170 (287)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcc
Confidence 57788888899999999987533222 233444444444433211 001367999999854
No 347
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=72.20 E-value=56 Score=34.91 Aligned_cols=140 Identities=14% Similarity=0.035 Sum_probs=77.5
Q ss_pred hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-----c-------------CCC--eE
Q 006969 162 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS-----L-------------GCD--DV 221 (623)
Q Consensus 162 ~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~-----~-------------G~~--~V 221 (623)
.+|...+++.+... .+.|.+-++.-..-- ..+..+. +.+..+.+.|+.+.+ . .+. .|
T Consensus 198 ~~Dy~~~a~~l~~~-ad~ieiNiScPNt~G-l~~lq~~-~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~V 274 (415)
T 3i65_A 198 VDDLKYCINKIGRY-ADYIAINVSSPNTPG-LRDNQEA-GKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFV 274 (415)
T ss_dssp HHHHHHHHHHHGGG-CSEEEEECCCCC---------CC-HHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEE
T ss_pred HHHHHHHHHHHHhh-CCEEEEECCCCCCCC-cccccCH-HHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEE
Confidence 36776677766543 666666654432211 0111222 334444444444321 1 122 23
Q ss_pred EEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccc-------------c-CH---HHHHHHHHHHHHhCCCCcceeE
Q 006969 222 EFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGI-------------T-MP---TEFGKLIADIKANTPGIENVVI 284 (623)
Q Consensus 222 ~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~-------------~-~P---~~v~~li~~l~~~~~~~~~v~i 284 (623)
-..| | .+.+.+.++++.+.++|+|.|.+.-|.+. + -| ...-++|+.+++.+++ ++||
T Consensus 275 Ki~p-d---~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~--~iPI 348 (415)
T 3i65_A 275 KLAP-D---LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNK--QIPI 348 (415)
T ss_dssp EECS-C---CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTT--CSCE
T ss_pred EecC-C---CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCC--CCCE
Confidence 4466 2 35567899999999999999999887642 1 11 2234778888888753 3455
Q ss_pred EEeecCCcchHHHHHHHHHHhCCCEEEec
Q 006969 285 STHCQNDLGLSTANTIAGACAGARQVEVT 313 (623)
Q Consensus 285 ~~H~HND~GlAvANslaAv~aGA~~Vd~T 313 (623)
..=.==.. -..++.++.+||+.|...
T Consensus 349 Ig~GGI~s---~eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 349 IASGGIFS---GLDALEKIEAGASVCQLY 374 (415)
T ss_dssp EECSSCCS---HHHHHHHHHHTEEEEEES
T ss_pred EEECCCCC---HHHHHHHHHcCCCEEEEc
Confidence 42211111 246778888999888654
No 348
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=72.07 E-value=57 Score=34.32 Aligned_cols=143 Identities=14% Similarity=0.044 Sum_probs=89.5
Q ss_pred chhhHHH-HHHHHhcCCCC-EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHH-HcCCCeEE--EcccCCCCCCHHH
Q 006969 161 NERDIKT-AWEAVKYAKRP-RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFAR-SLGCDDVE--FSPEDAGRSDRKF 235 (623)
Q Consensus 161 ~~~dI~~-a~eal~~a~~~-~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak-~~G~~~V~--f~~eda~r~d~e~ 235 (623)
.++|+.+ +++.+..+-.+ ++.+-+-.++.+....-|.+.+++++.+.+.++.++ +.|+. +. ++.. - ..+++.
T Consensus 90 t~ed~~r~a~e~~ed~a~dgV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~~~~gi~-~rlI~~~~-R-~~~~e~ 166 (380)
T 4gxw_A 90 RPDDLRRIAYEYLEDAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAARDFGIG-ARLIPSID-R-EQDPDE 166 (380)
T ss_dssp SHHHHHHHHHHHHHHHHTTTEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHCCE-EEEEEEEE-T-TSCHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHHHhcCCc-EEEEEeec-C-CCCHHH
Confidence 4566654 34444332222 333333445654444457899999999998888765 46764 43 3432 1 246788
Q ss_pred HHHHHHHHHHc---CCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH-hCCCEEE
Q 006969 236 LYEILGEVIKV---GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQVE 311 (623)
Q Consensus 236 l~~~~~~~~~a---Ga~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~-aGA~~Vd 311 (623)
..++++.+.+. |+-.|.|+=.=-...|..+.+.+...++. ++++-+|+=.. |....|...|++ .|+++|.
T Consensus 167 a~~~~~~a~~~~~~~VvG~dL~g~E~~~p~~~f~~~f~~ar~~-----Gl~~t~HAGE~-~~p~~~i~~al~~lga~RIg 240 (380)
T 4gxw_A 167 AVAIVDWMKANRADEVAGIGIDYRENDRPPELFWKAYRDARAA-----GFRTTAHAGEF-GMPWRNVETAVDLLHVDRVD 240 (380)
T ss_dssp HHHHHHHHHHTCCTTBCEEEEESCCTTCCGGGGHHHHHHHHHT-----TCEEEEEESCT-TCCHHHHHHHHHTSCCSEEE
T ss_pred HHHHHHHHHHhCCCCEEEEeecCCCCCCCHHHHHHHHHHHHHc-----CCCeeeecccc-CCchHHHHHHHHHcCCcccc
Confidence 88888887765 34455554222235678888999998875 26799999753 333457778886 6999995
Q ss_pred e
Q 006969 312 V 312 (623)
Q Consensus 312 ~ 312 (623)
=
T Consensus 241 H 241 (380)
T 4gxw_A 241 H 241 (380)
T ss_dssp E
T ss_pred c
Confidence 3
No 349
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=72.06 E-value=25 Score=35.29 Aligned_cols=127 Identities=8% Similarity=0.025 Sum_probs=71.1
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHH-HHHHHHHHHHHHHcCCCeEEEcccC-CC---C----CCH
Q 006969 163 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQV-VEIARSMVKFARSLGCDDVEFSPED-AG---R----SDR 233 (623)
Q Consensus 163 ~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~-l~~~~~~v~~ak~~G~~~V~f~~ed-a~---r----~d~ 233 (623)
.+++..++.++.+|.+.|-++....+ .....+..++.. -+.+.+..+.+++.|++.+.+.... .. . ...
T Consensus 36 ~~l~~~l~~aa~~G~~~VEl~~~~~~--~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~ 113 (305)
T 3obe_A 36 QDMPNGLNRLAKAGYTDLEIFGYRED--TGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKFD 113 (305)
T ss_dssp TTHHHHHHHHHHHTCCEEEECCBCTT--TCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCCCSCCCCCGGGHHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEecccccc--cccccCcCcccccccCHHHHHHHHHHCCCeEEEeeccccccccchhhHHHHH
Confidence 37788888888889999998753100 000012211100 0023455567788898633333211 11 1 114
Q ss_pred HHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCC--CCcceeEEEeecCC
Q 006969 234 KFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP--GIENVVISTHCQND 291 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~--~~~~v~i~~H~HND 291 (623)
+++.+.++.+.+.|+..|.++-.-....+..+..+++.+++..+ ...++.|.+|.|+.
T Consensus 114 ~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 173 (305)
T 3obe_A 114 EFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYHNHSN 173 (305)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEECCSG
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 67788888899999999998632222355666666655554321 01147899999985
No 350
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=71.68 E-value=50 Score=35.04 Aligned_cols=133 Identities=14% Similarity=0.082 Sum_probs=81.2
Q ss_pred HHHhcCCCCEEEEEecC--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC--eEEEcccCC-----CCC
Q 006969 170 EAVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD--DVEFSPEDA-----GRS 231 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~--------Sd~--h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~--~V~f~~eda-----~r~ 231 (623)
+..+.+|.+.|.|-.+- |+. ++...+|-+.+.-.+.+.+.|+.+|+. |-+ .|.+++.+. ...
T Consensus 178 ~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~ 257 (402)
T 2hsa_B 178 LNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSN 257 (402)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSC
T ss_pred HHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Confidence 33466899999887653 232 233456677777777777887777764 311 356677532 223
Q ss_pred CHHHHHHHHHHHHHcC------CcEEeecCcc--c-ccCH-------HHHHHHHHHHHHhCCCCcceeEEEeecCCcchH
Q 006969 232 DRKFLYEILGEVIKVG------ATTLNIPDTV--G-ITMP-------TEFGKLIADIKANTPGIENVVISTHCQNDLGLS 295 (623)
Q Consensus 232 d~e~l~~~~~~~~~aG------a~~I~l~DTv--G-~~~P-------~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA 295 (623)
+.+...++++.+.++| ++.|.+..-. + ...| ..-.++++.+++.++ +||..= .+. -
T Consensus 258 ~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~----iPvi~~--G~i--~ 329 (402)
T 2hsa_B 258 PLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQ----GTFICS--GGY--T 329 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCS----SCEEEE--SSC--C
T ss_pred CHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCC----CCEEEe--CCC--C
Confidence 4677889999999999 9988884210 0 0112 123467788888874 334322 122 2
Q ss_pred HHHHHHHHHhC-CCEE
Q 006969 296 TANTIAGACAG-ARQV 310 (623)
Q Consensus 296 vANslaAv~aG-A~~V 310 (623)
...+..+++.| ||.|
T Consensus 330 ~~~a~~~l~~g~aD~V 345 (402)
T 2hsa_B 330 RELGIEAVAQGDADLV 345 (402)
T ss_dssp HHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHCCCCcee
Confidence 35667778877 7766
No 351
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=71.68 E-value=71 Score=34.31 Aligned_cols=222 Identities=17% Similarity=0.131 Sum_probs=0.0
Q ss_pred HHHHHHHHHH--------------------hccccccCCCccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHH
Q 006969 130 FEAVRTIAKE--------------------VGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGI 189 (623)
Q Consensus 130 ~e~v~~i~~~--------------------~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~ 189 (623)
.+.+++|.+. ++...+-+.||. ....+.+.++.+..+|+..|||-..+...
T Consensus 119 ~~~v~~I~~a~~~~d~~~~~~~~~~~~d~~~PIiaD~DtGfG---------~~~nv~~tvk~~i~AGaaGi~IEDq~~~~ 189 (429)
T 1f8m_A 119 PQVVRRINNALQRADQIAKIEGDTSVENWLAPIVADGEAGFG---------GALNVYELQKALIAAGVAGSHWEDQLASE 189 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCSCSCSSCCEEEECTTTTS---------SHHHHHHHHHHHHHTTCSEEEEECBCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCccccCCCCEEEECCCCCC---------CcHHHHHHHHHHHHcCCEEEEEecCCCcc
Q ss_pred ----HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCC-----------------------------CCHHHH
Q 006969 190 ----HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGR-----------------------------SDRKFL 236 (623)
Q Consensus 190 ----h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r-----------------------------~d~e~l 236 (623)
|+.-+-=.+.+|.++++..+...+...|.+.|...=-|+-- ...+..
T Consensus 190 KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~li~s~~d~~d~~fl~g~~~~eg~y~~~~gld~A 269 (429)
T 1f8m_A 190 KKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSDVDERDQPFITGERTREGFYRTKNGIEPC 269 (429)
T ss_dssp CCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCCCSTTTGGGEEEEECTTSCEEECCSHHHH
T ss_pred ccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhccccccccccccccccCCCCcccccccccCHHHH
Q ss_pred HHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcc----------hHHHHHHHHHHhC
Q 006969 237 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLG----------LSTANTIAGACAG 306 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~G----------lAvANslaAv~aG 306 (623)
++=+++..+ |||.|.+. .|.-.++++.++.+.++..+|. .++..=+--.+- .-...-|+. .|
T Consensus 270 I~Ra~AYa~-gAD~if~e--~~~~~~eei~~f~~~v~~~~P~---~~La~n~sPsf~w~~~~~~~~~~~f~~eL~~--lG 341 (429)
T 1f8m_A 270 IARAKAYAP-FADLIWME--TGTPDLEAARQFSEAVKAEYPD---QMLAYNCSPSFNWKKHLDDATIAKFQKELAA--MG 341 (429)
T ss_dssp HHHHHHHGG-GCSEEEEC--CSSCCHHHHHHHHHHHHTTCTT---CEEEEECCTTSCHHHHCCHHHHHHHHHHHHH--HT
T ss_pred HHHHHHHHh-cCCEEEeC--CCCCCHHHHHHHHHHhcccCCC---ceeecCCCCCCCcccccchhhHhHHHHHHHH--cC
Q ss_pred CCEEEeccCCccCccCcccHHHHHHHHHhcccccccccccCCChhHHHHHHHHHHHHhCCCCCCCCcccCcchh
Q 006969 307 ARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAF 380 (623)
Q Consensus 307 A~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~~~~~G~~t~idl~~L~~~s~~v~~~~g~~i~~~~pivG~~aF 380 (623)
..++=.++.| =|+-+.++++++..+...|. ..... ..--++-.+-.|+..-.++..+|.+.|
T Consensus 342 ~~~v~~~l~~--~raa~~a~~~~a~~~~~~G~---------~ay~e-~Q~~e~~~~~~g~~~~~hq~~~G~~~~ 403 (429)
T 1f8m_A 342 FKFQFITLAG--FHALNYSMFDLAYGYAQNQM---------SAYVE-LQEREFAAEERGYTATKHQREVGAGYF 403 (429)
T ss_dssp EEEEEETTHH--HHHHHHHHHHHHHHHHHHTH---------HHHHH-HHHHHHHHGGGTCCTTSHHHHTTHHHH
T ss_pred CeEEEECcHH--HHHHHHHHHHHHHHHHHcCC---------hHHHH-HhHHHHhhhccCcchhhhhhhhccchH
No 352
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=71.61 E-value=12 Score=42.10 Aligned_cols=21 Identities=19% Similarity=0.216 Sum_probs=12.3
Q ss_pred eEeeeccccHHH--HHHHHHHcCCC
Q 006969 415 GIVLGKLSGRHA--LKDRLKELGYE 437 (623)
Q Consensus 415 ~i~lg~~SG~~~--i~~~l~~lG~~ 437 (623)
.++|| +|-++ ....|.+.|++
T Consensus 376 vvIIG--gG~AGl~aA~~l~~~g~~ 398 (671)
T 1ps9_A 376 LAVVG--AGPAGLAFAINAAARGHQ 398 (671)
T ss_dssp EEEEC--CSHHHHHHHHHHHTTTCE
T ss_pred EEEEC--CCHHHHHHHHHHHhCCCe
Confidence 47788 44443 34556667764
No 353
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=71.57 E-value=34 Score=35.05 Aligned_cols=160 Identities=19% Similarity=0.131 Sum_probs=87.9
Q ss_pred HHHHHHHhHcCC-CEEEEecCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCCEEE
Q 006969 104 LDIARQLAKLGV-DIIEAGFPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIH 181 (623)
Q Consensus 104 l~Ia~~L~~~Gv-d~IEvGfP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~ 181 (623)
.+++..+.++|. ..|..++ .++++. +.++.+.+.. +. -+...+..+ ..+.+..++.+..+|.+.|.
T Consensus 26 ~~la~av~~aG~lG~i~~~~--~~~~~~~~~i~~i~~~~-~~-----p~gvnl~~~----~~~~~~~~~~a~~~g~d~V~ 93 (332)
T 2z6i_A 26 GDLAGAVSKAGGLGIIGGGN--APKEVVKANIDKIKSLT-DK-----PFGVNIMLL----SPFVEDIVDLVIEEGVKVVT 93 (332)
T ss_dssp HHHHHHHHHHTSBEEEECTT--CCHHHHHHHHHHHHHHC-CS-----CEEEEECTT----STTHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHhCCCcEEeCCCC--CCHHHHHHHHHHHHHhc-CC-----CEEEEecCC----CCCHHHHHHHHHHCCCCEEE
Confidence 356777888885 7776654 455543 4455555432 11 111122111 22344444555557999988
Q ss_pred EEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecC--cccc
Q 006969 182 TFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPD--TVGI 259 (623)
Q Consensus 182 i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~D--TvG~ 259 (623)
+.... + . +.++.+++.|+. |.+.. .+++ .++.+.++|+|.|.+-. +-|.
T Consensus 94 ~~~g~-p-----------~-------~~i~~l~~~g~~-v~~~v-----~~~~----~a~~~~~~GaD~i~v~g~~~GG~ 144 (332)
T 2z6i_A 94 TGAGN-P-----------S-------KYMERFHEAGII-VIPVV-----PSVA----LAKRMEKIGADAVIAEGMEAGGH 144 (332)
T ss_dssp ECSSC-G-----------G-------GTHHHHHHTTCE-EEEEE-----SSHH----HHHHHHHTTCSCEEEECTTSSEE
T ss_pred ECCCC-h-----------H-------HHHHHHHHcCCe-EEEEe-----CCHH----HHHHHHHcCCCEEEEECCCCCCC
Confidence 75432 1 1 245556667764 54443 2333 45667789999998832 2222
Q ss_pred c-CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEEEec
Q 006969 260 T-MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEVT 313 (623)
Q Consensus 260 ~-~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlA-vANslaAv~aGA~~Vd~T 313 (623)
. .+. ..+++..+++.+. +|+-.= -|.. -.|..+++.+||+.|...
T Consensus 145 ~g~~~-~~~ll~~i~~~~~----iPViaa----GGI~~~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 145 IGKLT-TMTLVRQVATAIS----IPVIAA----GGIADGEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp CCSSC-HHHHHHHHHHHCS----SCEEEE----SSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCCcc-HHHHHHHHHHhcC----CCEEEE----CCCCCHHHHHHHHHcCCCEEEec
Confidence 1 122 2367788877652 344432 4444 467788888999998753
No 354
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=71.57 E-value=12 Score=35.70 Aligned_cols=69 Identities=17% Similarity=0.297 Sum_probs=45.6
Q ss_pred HHHHHHcCCcEEeecCcccccCH-HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCc
Q 006969 240 LGEVIKVGATTLNIPDTVGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI 317 (623)
Q Consensus 240 ~~~~~~aGa~~I~l~DTvG~~~P-~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~Gl 317 (623)
++.+.++|++.|.+- +.-...| ..+.++++.+++.+|+ .++.+-+|+ ...+..+.++|++.|-++..|.
T Consensus 81 i~~~~~~Gad~v~l~-~~~~~~p~~~~~~~i~~~~~~~~~---~~v~~~~~t-----~~e~~~~~~~G~d~i~~~~~g~ 150 (223)
T 1y0e_A 81 VDELIESQCEVIALD-ATLQQRPKETLDELVSYIRTHAPN---VEIMADIAT-----VEEAKNAARLGFDYIGTTLHGY 150 (223)
T ss_dssp HHHHHHHTCSEEEEE-CSCSCCSSSCHHHHHHHHHHHCTT---SEEEEECSS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHhCCCCEEEEe-eecccCcccCHHHHHHHHHHhCCC---ceEEecCCC-----HHHHHHHHHcCCCEEEeCCCcC
Confidence 344567788877663 2222234 4567889999998864 456666664 4456778999999997655544
No 355
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=71.57 E-value=16 Score=37.75 Aligned_cols=126 Identities=10% Similarity=0.088 Sum_probs=81.1
Q ss_pred HhCCCHHHHHHHHHHHHHHHHH-cCCC-eEEEcccCCCCCCHHHHHHHHHHHHHc--CCcEEeec-CcccccCHHHHHHH
Q 006969 194 KLRKTKQQVVEIARSMVKFARS-LGCD-DVEFSPEDAGRSDRKFLYEILGEVIKV--GATTLNIP-DTVGITMPTEFGKL 268 (623)
Q Consensus 194 ~l~~t~ee~l~~~~~~v~~ak~-~G~~-~V~f~~eda~r~d~e~l~~~~~~~~~a--Ga~~I~l~-DTvG~~~P~~v~~l 268 (623)
.-|.+.+++++.+.+.++.+++ .|+. .+.+++. -..+++...+.++.+.+. ++..|.|+ |- ....|..+.+.
T Consensus 106 ~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~--R~~~~~~a~~~~~~a~~~~~~vvG~dL~g~E-~~~~~~~~~~~ 182 (326)
T 3pao_A 106 DRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFL--RHLSEEQAQKTLDQALPFRDAFIAVGLDSSE-VGHPPSKFQRV 182 (326)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHCCEECCEEEEE--TTSCHHHHHHHHHHHGGGGGGCSEEEEESCC-TTCCGGGGHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHhhCceEEEEEEEeC--CCCCHHHHHHHHHHHhhccccceeeCCCCCC-CCCCHHHHHHH
Confidence 4578999999999999988764 5753 1334443 234677777777777654 45555553 33 24568888888
Q ss_pred HHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH-hCCCEEEeccCCccCccCcccHHHHHHHHHhc
Q 006969 269 IADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQVEVTINGIGERAGNASLEEVVMAFKCR 336 (623)
Q Consensus 269 i~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~-aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~ 336 (623)
++..++. ++++.+|+.-..+ ..+...|+. .|+++| |-|-+.-. + ++++..|..+
T Consensus 183 ~~~A~~~-----gl~~~~HagE~~~--~~~i~~al~~lg~~ri-----gHgv~l~~-d-~~l~~~l~~~ 237 (326)
T 3pao_A 183 FDRARSE-----GFLTVAHAGEEGP--PEYIWEALDLLKVERI-----DHGVRAFE-D-ERLMRRLIDE 237 (326)
T ss_dssp HHHHHHT-----TCEECEEESSSSC--HHHHHHHHHTTCCSSE-----EECGGGGG-C-HHHHHHHHHH
T ss_pred HHHHHHc-----CCceeeecCCCCC--HHHHHHHHhcCCCcee-----eeeeeecc-c-HHHHHHHHHc
Confidence 8888764 2678889887654 356678885 799876 33332221 0 3456666654
No 356
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=71.56 E-value=69 Score=30.23 Aligned_cols=164 Identities=13% Similarity=0.082 Sum_probs=94.1
Q ss_pred CC-CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeec----------ccchhhH
Q 006969 97 TL-TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS----------RCNERDI 165 (623)
Q Consensus 97 ~~-t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~----------r~~~~dI 165 (623)
+| ..+.-.++++.+.+.|.+.|++.. + +.++.+.+.... |.+..+. ....+.+
T Consensus 18 p~~~~~~~~~~a~~~~~~Ga~~i~~~~----~---~~i~~i~~~~~~---------pv~~~~~~~~~~~~~~i~~~~~~i 81 (223)
T 1y0e_A 18 PLHSSFIMSKMALAAYEGGAVGIRANT----K---EDILAIKETVDL---------PVIGIVKRDYDHSDVFITATSKEV 81 (223)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEES----H---HHHHHHHHHCCS---------CEEEECBCCCTTCCCCBSCSHHHH
T ss_pred CCCCCccHHHHHHHHHHCCCeeeccCC----H---HHHHHHHHhcCC---------CEEeeeccCCCccccccCCcHHHH
Confidence 44 457888999999999999999853 3 346666654321 2211110 0133456
Q ss_pred HHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEEcccCCCCCCHHHHHHHHHHH
Q 006969 166 KTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPEDAGRSDRKFLYEILGEV 243 (623)
Q Consensus 166 ~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~--G~~~V~f~~eda~r~d~e~l~~~~~~~ 243 (623)
+.++++ |.+.|++-.... .++.+ .+.+.++++++. |.. +..++ .+++. +..+
T Consensus 82 ~~~~~~----Gad~v~l~~~~~---------~~p~~---~~~~~i~~~~~~~~~~~-v~~~~-----~t~~e----~~~~ 135 (223)
T 1y0e_A 82 DELIES----QCEVIALDATLQ---------QRPKE---TLDELVSYIRTHAPNVE-IMADI-----ATVEE----AKNA 135 (223)
T ss_dssp HHHHHH----TCSEEEEECSCS---------CCSSS---CHHHHHHHHHHHCTTSE-EEEEC-----SSHHH----HHHH
T ss_pred HHHHhC----CCCEEEEeeecc---------cCccc---CHHHHHHHHHHhCCCce-EEecC-----CCHHH----HHHH
Confidence 666554 888887654321 00000 123566677776 653 54444 23443 3447
Q ss_pred HHcCCcEEeecC---c---cccc-CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcch-HHHHHHHHHHhCCCEEE
Q 006969 244 IKVGATTLNIPD---T---VGIT-MPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAGACAGARQVE 311 (623)
Q Consensus 244 ~~aGa~~I~l~D---T---vG~~-~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~Gl-AvANslaAv~aGA~~Vd 311 (623)
.++|++.|.+.- | .+.. .+. -.++++.+++.+. +|+.. +-|. -..|...++++||+.|-
T Consensus 136 ~~~G~d~i~~~~~g~t~~~~~~~~~~~-~~~~~~~~~~~~~----ipvia----~GGI~~~~~~~~~~~~Gad~v~ 202 (223)
T 1y0e_A 136 ARLGFDYIGTTLHGYTSYTQGQLLYQN-DFQFLKDVLQSVD----AKVIA----EGNVITPDMYKRVMDLGVHCSV 202 (223)
T ss_dssp HHTTCSEEECTTTTSSTTSTTCCTTHH-HHHHHHHHHHHCC----SEEEE----ESSCCSHHHHHHHHHTTCSEEE
T ss_pred HHcCCCEEEeCCCcCcCCCCCCCCCcc-cHHHHHHHHhhCC----CCEEE----ecCCCCHHHHHHHHHcCCCEEE
Confidence 789999886521 1 1111 222 2457777777652 45543 3566 57788888999998874
No 357
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=71.37 E-value=24 Score=35.65 Aligned_cols=95 Identities=8% Similarity=-0.068 Sum_probs=50.6
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCC
Q 006969 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGA 248 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa 248 (623)
++.+...|++.|-+..++.+.+ -.|.+|-.+.++.+++.+. | |..+ .+..+.+...+.++.+.++||
T Consensus 26 v~~li~~Gv~gl~v~GtTGE~~-----~Ls~eEr~~v~~~~~~~~~--g---ViaG---vg~~~t~~ai~la~~A~~~Ga 92 (288)
T 2nuw_A 26 AKNLLEKGIDAIFVNGTTGLGP-----ALSKDEKRQNLNALYDVTH--K---LIFQ---VGSLNLNDVMELVKFSNEMDI 92 (288)
T ss_dssp HHHHHHTTCCEEEETSTTTTGG-----GSCHHHHHHHHHHHTTTCS--C---EEEE---CCCSCHHHHHHHHHHHHTSCC
T ss_pred HHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhC--C---eEEe---eCCCCHHHHHHHHHHHHhcCC
Confidence 4444455666666666666532 2466665554444333321 1 3332 233455666777777777777
Q ss_pred cEEeecC-cccc-cCHHHHHHHHHHHHHhC
Q 006969 249 TTLNIPD-TVGI-TMPTEFGKLIADIKANT 276 (623)
Q Consensus 249 ~~I~l~D-TvG~-~~P~~v~~li~~l~~~~ 276 (623)
|.+.+.= -.-- .+++++.+.++.+.+..
T Consensus 93 davlv~~P~y~~~~s~~~l~~~f~~va~a~ 122 (288)
T 2nuw_A 93 LGVSSHSPYYFPRLPEKFLAKYYEEIARIS 122 (288)
T ss_dssp SEEEECCCCSSCSCCHHHHHHHHHHHHHHC
T ss_pred CEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 7654431 1111 35566666666666665
No 358
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=71.25 E-value=31 Score=36.27 Aligned_cols=117 Identities=16% Similarity=0.165 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
+..++.++-+++++.|.+.|++.||-.+| +.|++..+++.+...- |.+.+=.-....+++..++.
T Consensus 197 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~~~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~i~~--- 261 (397)
T 2qde_A 197 NGAWTYDQALTTIRALEKYNLSKIEQPLP---AWDLDGMARLRGKVAT---------PIYADESAQELHDLLAIINK--- 261 (397)
T ss_dssp TTCCCHHHHHHHHHHHGGGCCSCEECCSC---TTCHHHHHHHHTTCSS---------CEEESTTCCSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhCCCCEEECCCC---hhhHHHHHHHHhhCCC---------CEEEeCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHH--HHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHH
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQV--VEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGE 242 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~--l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~ 242 (623)
...+.|.+ +...+ +..+.++++.|+++|+. +..+....+.......+.++..
T Consensus 262 ~~~d~v~i---------------k~~~~GGit~~~~i~~~A~~~g~~-~~~~~~~es~ig~aa~~hlaa~ 315 (397)
T 2qde_A 262 GAADGLMI---------------KTQKAGGLLKAQRWLTLARLANLP-VICGCMVGSGLEASPAAHLLAA 315 (397)
T ss_dssp TCCSEEEE---------------CHHHHTSHHHHHHHHHHHHHHTCC-EEECCCSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEE---------------eccccCCHHHHHHHHHHHHHcCCe-EEEecCcccHHHHHHHHHHHHh
No 359
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=71.22 E-value=17 Score=36.58 Aligned_cols=137 Identities=16% Similarity=0.202 Sum_probs=82.6
Q ss_pred CCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecc-cchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHH
Q 006969 115 VDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEH 193 (623)
Q Consensus 115 vd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~ 193 (623)
+|.+-+|.... .+++.+++++.. + .|.+.--+. ...+++..|.+.+...|.+.+++.--.+..
T Consensus 95 vd~~~IgA~~~--rn~~ll~~~a~~-~---------~PV~lK~G~~~t~~e~~~Av~~i~~~GN~~i~L~~rG~~~---- 158 (267)
T 2nwr_A 95 ADIIQIPAFLC--RQTDLLLAAAKT-G---------RAVNVKKGQFLAPWDTKNVVEKLKFGGAKEIYLTERGTTF---- 158 (267)
T ss_dssp CSEEEECGGGT--TCHHHHHHHHTT-T---------SEEEEECCTTCCGGGGHHHHHHHHHTTCSSEEEEECCEEC----
T ss_pred CCEEEECcccc--cCHHHHHHHHcC-C---------CcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC----
Confidence 45555543221 234566766532 1 144444344 467889999998888888877776443311
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCC----------CCCCHHHHHHHHHHHHHcCCcEEe----------e
Q 006969 194 KLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA----------GRSDRKFLYEILGEVIKVGATTLN----------I 253 (623)
Q Consensus 194 ~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda----------~r~d~e~l~~~~~~~~~aGa~~I~----------l 253 (623)
.+.. +.++ ...+...|+.| .|.|+|--+ +.-.++++..++.+++..||+.+. +
T Consensus 159 ~y~~---~~~d--l~~i~~lk~~~--pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~mIE~H~~pd~al 231 (267)
T 2nwr_A 159 GYNN---LVVD--FRSLPIMKQWA--KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFMETHPEPEKAL 231 (267)
T ss_dssp SSSC---EECC--TTHHHHHTTTS--EEEEETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEEEEEEESCGGGCS
T ss_pred CCCc---cccC--HHHHHHHHHcC--CEEEcCCcccccCCCcCcCCCCchhHHHHHHHHHHHcCCCEEEEEecCCcccCC
Confidence 1110 0000 01233455666 487754322 233557888999999999997433 4
Q ss_pred cCcccccCHHHHHHHHHHHHH
Q 006969 254 PDTVGITMPTEFGKLIADIKA 274 (623)
Q Consensus 254 ~DTvG~~~P~~v~~li~~l~~ 274 (623)
+|-.=.+.|+++.++++.+++
T Consensus 232 ~Dg~qsl~p~~l~~l~~~i~~ 252 (267)
T 2nwr_A 232 SDASTQLPLSQLEGIIEAILE 252 (267)
T ss_dssp SCTTTCEEGGGHHHHHHHHHH
T ss_pred CccccCCCHHHHHHHHHHHHH
Confidence 588888999999999999875
No 360
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=71.18 E-value=9.9 Score=41.33 Aligned_cols=72 Identities=22% Similarity=0.223 Sum_probs=53.2
Q ss_pred HHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccC
Q 006969 236 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 315 (623)
Q Consensus 236 l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~ 315 (623)
..+.++.+.++|++.|.+.=+.| .|....+.++.+++.+|+ +++.+- .++-..-+..+.++|++.|.++..
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G--~~~~~~e~i~~i~~~~p~---~pvi~g----~~~t~e~a~~l~~~G~d~I~v~~~ 308 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHG--HSRRVIETLEMIKADYPD---LPVVAG----NVATPEGTEALIKAGADAVKVGVG 308 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC--SSHHHHHHHHHHHHHCTT---SCEEEE----EECSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHHHHhCCCEEEEEecCC--chHHHHHHHHHHHHHCCC---ceEEeC----CcCCHHHHHHHHHcCCCEEEEcCC
Confidence 34678888999999999843344 567788899999999874 455542 244456668889999999999654
Q ss_pred C
Q 006969 316 G 316 (623)
Q Consensus 316 G 316 (623)
|
T Consensus 309 ~ 309 (494)
T 1vrd_A 309 P 309 (494)
T ss_dssp C
T ss_pred C
Confidence 3
No 361
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=70.95 E-value=90 Score=31.32 Aligned_cols=192 Identities=15% Similarity=0.117 Sum_probs=116.4
Q ss_pred CCCHHHHHHHHHHHhH-cCCCEEEE-e----cCCCChhHH-HHHHHHHHHhccccccCCCccceEEeecccchhh-HHHH
Q 006969 97 TLTSKEKLDIARQLAK-LGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTA 168 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~-~Gvd~IEv-G----fP~~s~~d~-e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a 168 (623)
.+..+.-.++++.|.+ .|++-|=+ | ++.-+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+
T Consensus 20 ~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la 92 (293)
T 1f6k_A 20 TINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAK-------DQIALIAQVGSVNLKEAVELG 92 (293)
T ss_dssp CBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEECCCSCHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhC-------CCCeEEEecCCCCHHHHHHHH
Confidence 4788888899999999 99999877 3 466666665 55565555543 3457888887655444 4443
Q ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc-cc-CCCCCCHHHHHHHHHHHHHc
Q 006969 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS-PE-DAGRSDRKFLYEILGEVIKV 246 (623)
Q Consensus 169 ~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~-~e-da~r~d~e~l~~~~~~~~~a 246 (623)
-. ...+|++.+-+..|-. .+.+.++.++-..+..+.. ++..+-|+ |. .+...+++.+.+++ +
T Consensus 93 ~~-a~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~va~a~---~lPiilYn~P~~tg~~l~~~~~~~La----~- 156 (293)
T 1f6k_A 93 KY-ATELGYDCLSAVTPFY-------YKFSFPEIKHYYDTIIAET---GSNMIVYSIPFLTGVNMGIEQFGELY----K- 156 (293)
T ss_dssp HH-HHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHHH---CCCEEEEECHHHHCCCCCHHHHHHHH----T-
T ss_pred HH-HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHhC---CCCEEEEECccccCcCCCHHHHHHHh----c-
Confidence 22 3446999887766532 3456677666555554432 44545554 42 23356777776665 2
Q ss_pred CCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcccH
Q 006969 247 GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASL 326 (623)
Q Consensus 247 Ga~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa~l 326 (623)
-...+.+.||.|- ..++.++++. .++ .. -+-.+++ ..+.++..|++.+ +.| .+|...
T Consensus 157 ~pnIvgiK~s~gd--~~~~~~~~~~----~~~---f~-v~~G~d~------~~~~~l~~G~~G~---is~----~~n~~P 213 (293)
T 1f6k_A 157 NPKVLGVKFTAGD--FYLLERLKKA----YPN---HL-IWAGFDE------MMLPAASLGVDGA---IGS----TFNVNG 213 (293)
T ss_dssp STTEEEEEECSCC--HHHHHHHHHH----CTT---SE-EEECCGG------GHHHHHHTTCSEE---EES----THHHHH
T ss_pred CCCEEEEEECCCC--HHHHHHHHHh----CCC---eE-EEECcHH------HHHHHHHCCCcEE---EeC----HHHhhH
Confidence 2579999999885 3555555542 332 11 2223333 2566778898754 333 356766
Q ss_pred HHHHHHHH
Q 006969 327 EEVVMAFK 334 (623)
Q Consensus 327 Eevv~~L~ 334 (623)
+.++...+
T Consensus 214 ~~~~~l~~ 221 (293)
T 1f6k_A 214 VRARQIFE 221 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655444
No 362
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=70.92 E-value=26 Score=36.87 Aligned_cols=81 Identities=10% Similarity=-0.088 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHcCCcEEeec-------------------CcccccC---HHHHHHHHHHHHHhCCCCcceeEEEeecCC
Q 006969 234 KFLYEILGEVIKVGATTLNIP-------------------DTVGITM---PTEFGKLIADIKANTPGIENVVISTHCQND 291 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l~-------------------DTvG~~~---P~~v~~li~~l~~~~~~~~~v~i~~H~HND 291 (623)
+.+.+.++.+.++|.|.|-|- |-.|... +..+.++|+.+|+.++.. .+.+-++..+.
T Consensus 167 ~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~V~vrls~~~~ 245 (376)
T 1icp_A 167 NEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD-RVGIRISPFAH 245 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC-ceEEEeccccc
Confidence 455677778889999987762 4455543 334678899999988631 24444443322
Q ss_pred -----cch----HHHHHHHHHHhCCCEEEeccC
Q 006969 292 -----LGL----STANTIAGACAGARQVEVTIN 315 (623)
Q Consensus 292 -----~Gl----AvANslaAv~aGA~~Vd~Tv~ 315 (623)
.+. ++.-+-..-++|++.|+.+..
T Consensus 246 ~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~ 278 (376)
T 1icp_A 246 YNEAGDTNPTALGLYMVESLNKYDLAYCHVVEP 278 (376)
T ss_dssp TTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECC
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 122 333333444679999998753
No 363
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=70.70 E-value=19 Score=35.13 Aligned_cols=196 Identities=6% Similarity=-0.021 Sum_probs=104.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCC-Ch-hHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAA-SK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~-s~-~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
.|-.+-...+-+.+.+.|++.+=...... .+ .+.+.++.+...- ++ + |... ......+...++.+.
T Consensus 18 ~~~~~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---vd---g----iii~-~~~~~~~~~~~~~~~- 85 (304)
T 3o1i_D 18 SYWLSVNYGMVSEAEKQGVNLRVLEAGGYPNKSRQEQQLALCTQWG---AN---A----IILG-TVDPHAYEHNLKSWV- 85 (304)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEEECSSTTCHHHHHHHHHHHHHHT---CS---E----EEEC-CSSTTSSTTTHHHHT-
T ss_pred cHHHHHHHHHHHHHHHcCCeEEEEcCCCCCCHHHHHHHHHHHHHcC---CC---E----EEEe-CCChhHHHHHHHHHc-
Confidence 34456666777888889997665543321 22 3345666655431 11 1 1111 122222223344455
Q ss_pred CCCCEEEEEecCC-----HHHHHHHhCCCHHHHHHHHHHHHHHHHHcC-----CCeEEE-cccCCCCCCHHHHHHHHHHH
Q 006969 175 AKRPRIHTFIATS-----GIHMEHKLRKTKQQVVEIARSMVKFARSLG-----CDDVEF-SPEDAGRSDRKFLYEILGEV 243 (623)
Q Consensus 175 a~~~~v~i~~~~S-----d~h~~~~l~~t~ee~l~~~~~~v~~ak~~G-----~~~V~f-~~eda~r~d~e~l~~~~~~~ 243 (623)
.++|.|.+-.... +-......+.+ +.+....+++++.+.| ...|.| ..........+.+.-+.+++
T Consensus 86 ~~iPvV~~~~~~~~~~~~~~~~~~~V~~D---~~~~g~~a~~~l~~~g~~~~~~~~i~~i~~~~~~~~~~~R~~gf~~~l 162 (304)
T 3o1i_D 86 GNTPVFATVNQLDLDEEQSTLLKGEVGVD---WYWMGYEAGKYLAERHPKGSGKTNIALLLGPRTRGGTKPVTTGFYEAI 162 (304)
T ss_dssp TTSCEEECSSCCCCCTTTGGGEEEECCCC---HHHHHHHHHHHHHTTSBTTTCCEEEEEECCCC-----CHHHHHHHHTT
T ss_pred CCCCEEEecCCCcccccCCCceEEEEecC---HHHHHHHHHHHHHHhcccCCCCCEEEEEECCCCcchHHHHHHHHHHHH
Confidence 6889876532221 11111112333 3455667888888888 655555 22222223335555566666
Q ss_pred HHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCc
Q 006969 244 IKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI 317 (623)
Q Consensus 244 ~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~Gl 317 (623)
.+.|...... -.+-..+....+.+..+. ..|.++ . + |.|| .+|.+-.-+.-++|.+ =|.+|.|+
T Consensus 163 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~l-~~~~~~---a-i-~~~d-~~a~g~~~al~~~g~~-~di~vvg~ 226 (304)
T 3o1i_D 163 KNSDIHIVDS--FWADNDKELQRNLVQRVI-DMGNID---Y-I-VGSA-VAIEAAISELRSADKT-HDIGLVSV 226 (304)
T ss_dssp TTBTEEEEEC--CCCCSCHHHHHHHHHHHH-HHSCCS---E-E-EECH-HHHHHHHHHHTTTTCG-GGSEEBCS
T ss_pred hcCCCEEEEe--ecCCCcHHHHHHHHHHHH-cCCCCC---E-E-EecC-cchHHHHHHHHhcCCC-CCeEEEEe
Confidence 6667554432 255567888888877766 555432 3 4 5576 5666655666677876 46677776
No 364
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=70.69 E-value=1.2e+02 Score=32.80 Aligned_cols=158 Identities=18% Similarity=0.203 Sum_probs=93.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHh-ccccccCCCccceEEeecccchhhHHHHHHHHhcC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEV-GNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~-~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 175 (623)
.+|.+++..| +...+.|+|.|=+-|. .+++|.+.++.+.+.. +.. ..+.+.| . +.+.++..-+.+..
T Consensus 169 ~ltekD~~Di-~~~l~~gvD~I~lsfV-~saeDv~~~~~~l~~~~~~~----i~IiakI---E--t~eav~nldeI~~~- 236 (470)
T 1e0t_A 169 ALAEKDKQDL-IFGCEQGVDFVAASFI-RKRSDVIEIREHLKAHGGEN----IHIISKI---E--NQEGLNNFDEILEA- 236 (470)
T ss_dssp SSCHHHHHHH-HHHHHHTCSEEEESSC-CSHHHHHHHHHHHHTTTCTT----CEEEEEE---C--SHHHHHTHHHHHHH-
T ss_pred CCCcCCHHHH-HHHHHcCCCEEEECCC-CCHHHHHHHHHHHHHhcCCC----ceEEEEE---C--CHHHHHhHHHHHHH-
Confidence 4677888777 4555679999998776 4677777777665543 211 0112222 1 33444332222221
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------cccCCCCCCHHHHHHHHHHHHHcCCc
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGAT 249 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~~eda~r~d~e~l~~~~~~~~~aGa~ 249 (623)
.+ .++++-.|+=.+ +..+++......+++.|+.+|+. |.. |.....+-....+.+++.++.+ |+|
T Consensus 237 -sD--gImVargDLgve----ig~e~v~~~qk~ii~~araaGkp-vI~ATQMLeSMi~~p~PTRAEvsDVanAV~d-G~D 307 (470)
T 1e0t_A 237 -SD--GIMVARGDLGVE----IPVEEVIFAQKMMIEKCIRARKV-VITATMMLDSMIKNPRPTDAEAGDVANAILD-GTD 307 (470)
T ss_dssp -SS--EEEEEHHHHHHH----SCHHHHHHHHHHHHHHHHHHTCE-EEEECC---------CCCHHHHHHHHHHHHH-TCS
T ss_pred -CC--EEEECchHhhhh----cCHHHHHHHHHHHHHHHHHcCCC-EEEechhhHhhccCCCccHHHHhhhhHhhhc-Ccc
Confidence 34 466676675544 33577777778899999999975 543 2223445567788888888765 999
Q ss_pred EEeec-CcccccCHHHHHHHHHHHHHh
Q 006969 250 TLNIP-DTVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 250 ~I~l~-DTvG~~~P~~v~~li~~l~~~ 275 (623)
.+-|. .|.-...|.+.-+.+..+...
T Consensus 308 avMLSgETA~G~yPveaV~~m~~I~~~ 334 (470)
T 1e0t_A 308 AVMLSGESAKGKYPLEAVSIMATICER 334 (470)
T ss_dssp EEEECCC------CHHHHHHHHHHHHH
T ss_pred EEEecccccCCCCHHHHHHHHHHHHHH
Confidence 99995 677778898877777666554
No 365
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=70.57 E-value=9.5 Score=38.93 Aligned_cols=111 Identities=15% Similarity=0.197 Sum_probs=70.1
Q ss_pred ceEEeecc-cchhhHHHHHHHHhcCCC------CEEEEEecCCHHHHHHHhCCCHHH---HHHHHHHHHHHHHHcCCCeE
Q 006969 152 PVICGLSR-CNERDIKTAWEAVKYAKR------PRIHTFIATSGIHMEHKLRKTKQQ---VVEIARSMVKFARSLGCDDV 221 (623)
Q Consensus 152 ~~i~~~~r-~~~~dI~~a~eal~~a~~------~~v~i~~~~Sd~h~~~~l~~t~ee---~l~~~~~~v~~ak~~G~~~V 221 (623)
|++.--+. +..+|+..+++.+...|. +.|.+.--.+. ++. ++ .+. ++...|+.|+. |
T Consensus 133 PVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~------y~~--~~~~vdl~----~i~~lk~~~~p-V 199 (288)
T 3tml_A 133 PVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVS------FGY--NNLVSDMR----SLAIMRETNAP-V 199 (288)
T ss_dssp CEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEE------CSS--SCEECCHH----HHHHGGGGSSC-E
T ss_pred cEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCC------CCC--CcCcCCHH----HHHHHHhcCCc-E
Confidence 55554444 477899999988876665 54554422221 111 11 122 23334557776 7
Q ss_pred EEcccCC----------CCCCHHHHHHHHHHHHHcCCcEEe----------ecCcccccCHHHHHHHHHHHHHh
Q 006969 222 EFSPEDA----------GRSDRKFLYEILGEVIKVGATTLN----------IPDTVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 222 ~f~~eda----------~r~d~e~l~~~~~~~~~aGa~~I~----------l~DTvG~~~P~~v~~li~~l~~~ 275 (623)
.|++--+ +--.++++..++.+++.+||+.+. ++|--=.+.|+++.++++.+++.
T Consensus 200 ~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~H~~pd~al~D~~~sl~p~el~~lv~~ir~i 273 (288)
T 3tml_A 200 VFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFMETHPNPAEAKSDGPNAVPLNRMGALLETLVTL 273 (288)
T ss_dssp EEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCSEEEEEEESSGGGCSSCGGGCEEGGGHHHHHHHHHHH
T ss_pred EEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEeeccChhhcCCchhhcCCHHHHHHHHHHHHHH
Confidence 7744211 123457889999999999998333 47888889999999999998863
No 366
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=70.55 E-value=8.7 Score=38.86 Aligned_cols=117 Identities=16% Similarity=0.119 Sum_probs=72.6
Q ss_pred HHHHHHHHHHcCCCeEEEcc---cCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcce
Q 006969 206 ARSMVKFARSLGCDDVEFSP---EDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENV 282 (623)
Q Consensus 206 ~~~~v~~ak~~G~~~V~f~~---eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v 282 (623)
+++-|+.++++|+. |.++- |.+...+ .+.++++.+.+.|-+.|-|.|-.--+.+++-.++|+.+++.+. +
T Consensus 82 l~ekI~l~~~~gV~-v~~GGTlfE~~l~qg--~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~f~----V 154 (276)
T 1u83_A 82 LEEKISTLKEHDIT-FFFGGTLFEKYVSQK--KVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDEFL----V 154 (276)
T ss_dssp HHHHHHHHHHTTCE-EEECHHHHHHHHHTT--CHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTTSE----E
T ss_pred HHHHHHHHHHcCCe-EeCCcHHHHHHHHcC--cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhhcE----E
Confidence 56788999999974 65532 2111111 4556777788899999999999999999999999998887652 2
Q ss_pred eEEE-------eecCCcchHHHHHHHHHHhCCCEE--Ee---ccCCccCccCcccHHHH
Q 006969 283 VIST-------HCQNDLGLSTANTIAGACAGARQV--EV---TINGIGERAGNASLEEV 329 (623)
Q Consensus 283 ~i~~-------H~HND~GlAvANslaAv~aGA~~V--d~---Tv~GlGERaGNa~lEev 329 (623)
..++ ..=-+...-+......++|||+.| ++ .-.||=+..||.....+
T Consensus 155 l~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEaRESG~~Gi~~~~g~~r~d~v 213 (276)
T 1u83_A 155 LSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEARESGTGGICSSSGDVRFQIV 213 (276)
T ss_dssp EEECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC------------------CCH
T ss_pred eeeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEeeeccCCCCccCCCCCCcHHHH
Confidence 2221 333567788889999999999986 44 11377778888877655
No 367
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=70.31 E-value=31 Score=37.11 Aligned_cols=53 Identities=13% Similarity=0.179 Sum_probs=40.5
Q ss_pred EEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCccc------------ccCHHHHHHHHHHHHH
Q 006969 221 VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG------------ITMPTEFGKLIADIKA 274 (623)
Q Consensus 221 V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG------------~~~P~~v~~li~~l~~ 274 (623)
|..+.+.++- ++..+.+.++.++++|+-.|+|-|.++ ...++++.+.|+..+.
T Consensus 155 viaD~DtGyG-~~~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~ 219 (435)
T 3lg3_A 155 IVADAEAGFG-GVLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARL 219 (435)
T ss_dssp EEEECTTCSS-SHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHH
T ss_pred eEEECCCCCC-CcHHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHH
Confidence 7788865544 445688999999999999999999985 2345677777776664
No 368
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=70.23 E-value=85 Score=32.50 Aligned_cols=195 Identities=15% Similarity=0.147 Sum_probs=110.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-e----cCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhh-HHHHHH
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAWE 170 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEv-G----fP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~e 170 (623)
.+..+.-.++++.|.+.||+-|=+ | |+.-+.+|+..+-+. ... +.+|.|.+.+..+.++ |+.+-.
T Consensus 43 ~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~-------grvpViaGvg~~st~eai~la~~ 113 (344)
T 2hmc_A 43 TPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVK-------AGIPVIVGTGAVNTASAVAHAVH 113 (344)
T ss_dssp SBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHH-------TTCCEEEECCCSSHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhC-------CCCcEEEecCCCCHHHHHHHHHH
Confidence 478888899999999999998866 4 466666665333332 221 2357888887655443 444433
Q ss_pred HHhcCCCCEEEEEecCCHHHHHHHhC-CCHHHHHHHHHHHHHHHHHcCCCeEEEcccCC-CCCCHHHHHHHHHHHHHcCC
Q 006969 171 AVKYAKRPRIHTFIATSGIHMEHKLR-KTKQQVVEIARSMVKFARSLGCDDVEFSPEDA-GRSDRKFLYEILGEVIKVGA 248 (623)
Q Consensus 171 al~~a~~~~v~i~~~~Sd~h~~~~l~-~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda-~r~d~e~l~~~~~~~~~aGa 248 (623)
...+|++.+-+..|-. .+ .+.+++++-..+..+. .-++..+.|+.--. ...+++.+.+++ .+. .
T Consensus 114 -A~~~Gadavlv~~P~y-------~~~~s~~~l~~~f~~IA~a--a~~lPiilYn~P~tg~~l~~e~~~~L~---a~~-p 179 (344)
T 2hmc_A 114 -AQKVGAKGLMVIPRVL-------SRGSVIAAQKAHFKAILSA--APEIPAVIYNSPYYGFATRADLFFALR---AEH-K 179 (344)
T ss_dssp -HHHHTCSEEEECCCCS-------SSTTCHHHHHHHHHHHHHH--STTSCEEEEEBGGGTBCCCHHHHHHHH---HHC-T
T ss_pred -HHhcCCCEEEECCCcc-------CCCCCHHHHHHHHHHHHhh--CCCCcEEEEecCccCCCcCHHHHHHHH---hcC-C
Confidence 2445899887765532 23 4666666554444331 23455455643222 245777777662 233 5
Q ss_pred cEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHH-HhCCCEEEeccCCccCccCcccHH
Q 006969 249 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGA-CAGARQVEVTINGIGERAGNASLE 327 (623)
Q Consensus 249 ~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv-~aGA~~Vd~Tv~GlGERaGNa~lE 327 (623)
..+.+.||.| |..+.++ ..+++..++ +.. -+-..+++ .+.++ ..|++.+ +.| .+|...+
T Consensus 180 nIvGiKdssg---p~d~~~~-~~~~~~~~~--~f~-v~~G~D~~------~l~~l~~~Ga~G~---is~----~anv~P~ 239 (344)
T 2hmc_A 180 NLVGFKEFGG---PADMRYA-AENITSRDD--EVT-LMIGVDTA------VVHGFVNCGATGA---ITG----IGNVLPK 239 (344)
T ss_dssp TEEEEEECSC---HHHHHHH-HHHTSCSSS--SCE-EEECSGGG------HHHHHHHSCCCEE---EES----GGGTSHH
T ss_pred CEEEEEcCCC---CCCHHHH-HHHHHHcCC--CEE-EEECcHHH------HHHHHHHcCCCEE---EeC----HHHhhHH
Confidence 7999999998 3223322 223333332 122 12233332 44566 7887644 333 4567777
Q ss_pred HHHHHHH
Q 006969 328 EVVMAFK 334 (623)
Q Consensus 328 evv~~L~ 334 (623)
.++...+
T Consensus 240 ~~~~l~~ 246 (344)
T 2hmc_A 240 EVIHLCK 246 (344)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665554
No 369
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=70.18 E-value=31 Score=35.51 Aligned_cols=92 Identities=16% Similarity=0.111 Sum_probs=60.0
Q ss_pred HHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcC--CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEE
Q 006969 209 MVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG--ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVIST 286 (623)
Q Consensus 209 ~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aG--a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~ 286 (623)
.++.+++.|+. +..+. + .+++.+ +.++.+.++| ++.|.+ |+ +...|....+.|+++++.+++ .++.
T Consensus 86 ~i~~~~~~g~~-v~v~~--g--~~~~~~-~~a~~~~~~g~~~~~i~i-~~-~~G~~~~~~~~i~~lr~~~~~---~~vi- 153 (336)
T 1ypf_A 86 FIRDMQSRGLI-ASISV--G--VKEDEY-EFVQQLAAEHLTPEYITI-DI-AHGHSNAVINMIQHIKKHLPE---SFVI- 153 (336)
T ss_dssp HHHHHHHTTCC-CEEEE--C--CSHHHH-HHHHHHHHTTCCCSEEEE-EC-SSCCSHHHHHHHHHHHHHCTT---SEEE-
T ss_pred HHHHHHhcCCe-EEEeC--C--CCHHHH-HHHHHHHhcCCCCCEEEE-EC-CCCCcHHHHHHHHHHHHhCCC---CEEE-
Confidence 34556666753 33332 1 233433 5678888999 888765 22 122678888999999999874 2333
Q ss_pred eecCCcchHHHHHHHHHHhCCCEEEeccC
Q 006969 287 HCQNDLGLSTANTIAGACAGARQVEVTIN 315 (623)
Q Consensus 287 H~HND~GlAvANslaAv~aGA~~Vd~Tv~ 315 (623)
.. ..+....+..|+++||+.|.++-.
T Consensus 154 ~G---~v~s~e~A~~a~~aGad~Ivvs~h 179 (336)
T 1ypf_A 154 AG---NVGTPEAVRELENAGADATKVGIG 179 (336)
T ss_dssp EE---EECSHHHHHHHHHHTCSEEEECSS
T ss_pred EC---CcCCHHHHHHHHHcCCCEEEEecC
Confidence 21 234567889999999999998543
No 370
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=70.05 E-value=47 Score=34.68 Aligned_cols=67 Identities=12% Similarity=0.124 Sum_probs=47.5
Q ss_pred HHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 006969 237 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~T 313 (623)
.+.++.+.++|++.|.|- +. ...|..+.+.++.+++.++ +++.+..= ....-+..++++||+.|.++
T Consensus 107 ~e~a~~l~eaGad~I~ld-~a-~G~~~~~~~~i~~i~~~~~----~~Vivg~v----~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLD-SA-HGHSLNIIRTLKEIKSKMN----IDVIVGNV----VTEEATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHHHTTCSEEEEC-CS-CCSBHHHHHHHHHHHHHCC----CEEEEEEE----CSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCcCeEEEe-CC-CCCcHHHHHHHHHHHHhcC----CcEEEccC----CCHHHHHHHHHcCcCEEEEe
Confidence 567788889999988762 22 2357788899999999873 34544211 22455788899999999873
No 371
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=69.93 E-value=10 Score=40.11 Aligned_cols=68 Identities=24% Similarity=0.277 Sum_probs=50.3
Q ss_pred HHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEE-eecCCcchHHHHHHHHHHhCCCEEEecc
Q 006969 237 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVIST-HCQNDLGLSTANTIAGACAGARQVEVTI 314 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~-H~HND~GlAvANslaAv~aGA~~Vd~Tv 314 (623)
.+.++.+.++|++.|.| ++ +...|..+.++|+++++.+|+ ++|.+ ..++ ..-+..+.++||+.|.++.
T Consensus 155 ~~~a~~~~~~G~d~i~i-~~-~~g~~~~~~e~i~~ir~~~~~---~pviv~~v~~-----~~~a~~a~~~Gad~I~vg~ 223 (404)
T 1eep_A 155 IERVEELVKAHVDILVI-DS-AHGHSTRIIELIKKIKTKYPN---LDLIAGNIVT-----KEAALDLISVGADCLKVGI 223 (404)
T ss_dssp HHHHHHHHHTTCSEEEE-CC-SCCSSHHHHHHHHHHHHHCTT---CEEEEEEECS-----HHHHHHHHTTTCSEEEECS
T ss_pred HHHHHHHHHCCCCEEEE-eC-CCCChHHHHHHHHHHHHHCCC---CeEEEcCCCc-----HHHHHHHHhcCCCEEEECC
Confidence 45567788899999988 32 234678889999999999864 55665 3332 5667788899999999853
No 372
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=69.76 E-value=6.1 Score=40.47 Aligned_cols=80 Identities=21% Similarity=0.228 Sum_probs=45.6
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeecC--c----ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHH
Q 006969 227 DAGRS-DRKFLYEILGEVIKVGATTLNIPD--T----VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 299 (623)
Q Consensus 227 da~r~-d~e~l~~~~~~~~~aGa~~I~l~D--T----vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANs 299 (623)
|+++. +++.+++.++..++.||+.|-+.= | ......+|+.+++..++..... +++|++=+=+ -.-+
T Consensus 44 dgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~--~vpiSIDT~~-----~~Va 116 (294)
T 2dqw_A 44 DGGRYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL--GVPVSVDTRK-----PEVA 116 (294)
T ss_dssp ---------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT--CSCEEEECSC-----HHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC--CCeEEEECCC-----HHHH
Confidence 56654 678888999999999999987752 1 2233346666665555443211 3678885544 3445
Q ss_pred HHHHHhCCCEEEec
Q 006969 300 IAGACAGARQVEVT 313 (623)
Q Consensus 300 laAv~aGA~~Vd~T 313 (623)
.+|+++||+.|+-.
T Consensus 117 ~aAl~aGa~iINdV 130 (294)
T 2dqw_A 117 EEALKLGAHLLNDV 130 (294)
T ss_dssp HHHHHHTCSEEECS
T ss_pred HHHHHhCCCEEEEC
Confidence 68888999998643
No 373
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=69.48 E-value=26 Score=36.82 Aligned_cols=200 Identities=14% Similarity=0.078 Sum_probs=112.7
Q ss_pred ccCCCCC-C-CCCHHHHHHHHHHHhHcCCCEEEEecCCCCh---------hH-------HHHHHHHHHHhccccccCCCc
Q 006969 89 DGEQSPG-A-TLTSKEKLDIARQLAKLGVDIIEAGFPAASK---------ED-------FEAVRTIAKEVGNAVDAESGY 150 (623)
Q Consensus 89 DG~Q~~g-~-~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~---------~d-------~e~v~~i~~~~~~~~~~~~~l 150 (623)
.+.+.-+ + ..+.+.-..+++.-.+++-+.|=--+|.... .. ...++.+++...
T Consensus 29 ~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~ga~~~a~~v~~~A~~~~--------- 99 (357)
T 3qm3_A 29 AEGFAIPAVNVVGTDSINAVLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAYG--------- 99 (357)
T ss_dssp HHTCCEEEEECCSHHHHHHHHHHHHHHTSCEEEEECHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHT---------
T ss_pred HcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccCccchhhHHHHHHHHHHHHHHHHHHCC---------
Confidence 3444443 2 3578999999999999999866432322100 00 122445554321
Q ss_pred cceEEeecccch---hhHHHHHHHH-------hcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCe
Q 006969 151 VPVICGLSRCNE---RDIKTAWEAV-------KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD 220 (623)
Q Consensus 151 ~~~i~~~~r~~~---~dI~~a~eal-------~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~ 220 (623)
+|+..=+=-+.. +.++.++++. ..+|...|-+ . .| ..+.|||++..++.+++|+..|+.
T Consensus 100 VPVaLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~GFtSVMi-D-gS--------~lp~eENI~~Tk~vv~~ah~~gvs- 168 (357)
T 3qm3_A 100 VPVILHTDHAARKLLPWIDGLIEANAQYKKTHGQALFSSHML-D-LS--------EESLEENLSTCEVYLQKLDALGVA- 168 (357)
T ss_dssp CEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEC-C-CT--------TSCHHHHHHHHHHHHHHHHHHTCE-
T ss_pred CcEEEECCCCCccchHHHHHHHHHhHHHHhhhcCCCCCEEEE-e-CC--------CCCHHHHHHHHHHHHHHHHHcCCe-
Confidence 344433333333 3456665543 1246666543 2 22 237899999999999999999974
Q ss_pred EEE------cccC----------CCCCCHHHHHHHHHHHHHc-CCcEEeec--Ccccc-------cCHHHHHHHHHHHHH
Q 006969 221 VEF------SPED----------AGRSDRKFLYEILGEVIKV-GATTLNIP--DTVGI-------TMPTEFGKLIADIKA 274 (623)
Q Consensus 221 V~f------~~ed----------a~r~d~e~l~~~~~~~~~a-Ga~~I~l~--DTvG~-------~~P~~v~~li~~l~~ 274 (623)
|+- +-|| .-.|+|+.+.+++++.-.. |+|.+-++ -.=|. +.|+...++-+.+++
T Consensus 169 VEaELG~igG~Edgv~~~~~~~~~~yT~Peea~~Fv~~tg~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~ 248 (357)
T 3qm3_A 169 LEIELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFGNVHGVYKPGNVSLQPEILKNSQKFVKD 248 (357)
T ss_dssp EEEECCCCCC-----CCSSTTCTTTSCCHHHHHHHHHHHTTTCSCEEEECCSSCCCSSCCSSCCCCCTHHHHHHHHHHHH
T ss_pred EEEEeeeeccccCCccccccccccccCCHHHHHHHHHHhCCCCcccEEEEecCCccCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 542 2222 2358999999988765221 34554432 22122 235666666666666
Q ss_pred hC--CCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 275 NT--PGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 275 ~~--~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
.+ ++..++||-+|.= .|.....-..|+..|+.-|
T Consensus 249 ~~~~~~~~~vpLVlHGg--SG~p~e~i~~ai~~GV~Ki 284 (357)
T 3qm3_A 249 KFALNSDKPINFVFHGG--SGSELKDIKNAVSYGVIKM 284 (357)
T ss_dssp HTTCSCSCCSCEEECSC--TTCCHHHHHHHHHTTEEEE
T ss_pred HhccccCCCCcEEEeCC--CCCCHHHHHHHHHCCceEE
Confidence 54 2111377887754 4666666666666666554
No 374
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=69.43 E-value=19 Score=37.37 Aligned_cols=106 Identities=11% Similarity=0.099 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
+..++.++-+++++.|.+.|++.||=.+| +.|++..+++.+...- |.+.+=.-....+++..++.
T Consensus 196 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~~~~~~~~l~~~~~i---------pIa~dE~~~~~~~~~~~i~~--- 260 (370)
T 1nu5_A 196 NQGWDEQTASIWIPRLEEAGVELVEQPVP---RANFGALRRLTEQNGV---------AILADESLSSLSSAFELARD--- 260 (370)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCCEEECCSC---TTCHHHHHHHHHHCSS---------EEEESTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHHhcCcceEeCCCC---cccHHHHHHHHHhCCC---------CEEeCCCCCCHHHHHHHHHh---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~ 229 (623)
...+.|.+ +..+---+..+.+.++.|+++|+. +..+....+
T Consensus 261 ~~~d~v~i-------------k~~~~GGit~~~~i~~~A~~~g~~-~~~~~~~es 301 (370)
T 1nu5_A 261 HAVDAFSL-------------KLCNMGGIANTLKVAAVAEAAGIS-SYGGTMLDS 301 (370)
T ss_dssp TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHHTCE-EEECCSSCC
T ss_pred CCCCEEEE-------------chhhcCCHHHHHHHHHHHHHcCCc-EEecCCcch
No 375
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=69.33 E-value=27 Score=36.72 Aligned_cols=123 Identities=7% Similarity=0.042 Sum_probs=76.7
Q ss_pred CCCHHHHHHHHHHHHHHHHH-cCCCeE--EEcccCCCCCCHHHHHHHHHHHHHc---CCcEEeecCcccccCH---HHHH
Q 006969 196 RKTKQQVVEIARSMVKFARS-LGCDDV--EFSPEDAGRSDRKFLYEILGEVIKV---GATTLNIPDTVGITMP---TEFG 266 (623)
Q Consensus 196 ~~t~ee~l~~~~~~v~~ak~-~G~~~V--~f~~eda~r~d~e~l~~~~~~~~~a---Ga~~I~l~DTvG~~~P---~~v~ 266 (623)
+.+.+++++.+.+.++.++. .|+. + .+++. |.-++...++++.+.+. |+..|.|+=--....| ..+.
T Consensus 120 gl~~~~vv~~v~~~~~~a~~~~gi~-~~lI~~~~---R~~~~~a~e~~~la~~~~~~~vvG~dL~g~E~~~~~~~~~~f~ 195 (367)
T 3iar_A 120 DLTPDEVVALVGQGLQEGERDFGVK-ARSILCCM---RHQPNWSPKVVELCKKYQQQTVVAIDLAGDETIPGSSLLPGHV 195 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHCCE-EEEEEEEE---TTCGGGHHHHHHHHHHTTTTTEEEEEEESCTTSTTGGGCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCe-EEEEEEeC---CCCCHHHHHHHHHHHhhCCCCEEEEcCCCcccCCCcchHHHHH
Confidence 68999999999999888754 5764 4 34543 33233455666666654 4445555422223344 6788
Q ss_pred HHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH-hCCCEEEeccCCccCccCcccHHHHHHHHHhc
Q 006969 267 KLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQVEVTINGIGERAGNASLEEVVMAFKCR 336 (623)
Q Consensus 267 ~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~-aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~ 336 (623)
+.++..++. ++++.+|+.-..+. .+...|+. .|+++|+ -|-+... + ++++..|..+
T Consensus 196 ~~f~~A~~~-----gl~~~~HagE~~~~--~~i~~al~~lg~~RIg-----Hgv~l~~-d-~~l~~~l~~~ 252 (367)
T 3iar_A 196 QAYQEAVKS-----GIHRTVHAGEVGSA--EVVKEAVDILKTERLG-----HGYHTLE-D-QALYNRLRQE 252 (367)
T ss_dssp HHHHHHHHH-----TCEEEEEESSSSCH--HHHHHHHHTSCCSEEE-----ECGGGGG-C-HHHHHHHHHT
T ss_pred HHHHHHHHc-----CCeeEEecCCcCCh--HHHHHHHHccCCceee-----eeeeecC-C-HHHHHHHHhC
Confidence 888887764 36799999877653 46678885 7999863 3332221 1 3456666654
No 376
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=69.29 E-value=1e+02 Score=31.40 Aligned_cols=173 Identities=13% Similarity=0.037 Sum_probs=92.2
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccch-hhHHHHHHHHhcCCC
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNE-RDIKTAWEAVKYAKR 177 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~-~dI~~a~eal~~a~~ 177 (623)
+.++-+++++.+.. .++.+++|.|--...-.+.++.|.+..+. +.+..+-+... .-+..+.+.+...|+
T Consensus 35 ~~~eal~l~~~l~~-~v~~vKVG~~lf~~~G~~~V~~Lk~~~g~---------~IflDlKl~DIpnTv~~av~~~a~lGa 104 (303)
T 3ru6_A 35 TKEECLQLAKELKN-LDIWLKVGLRAYLRDGFKFIEELKKVDDF---------KIFLDLKFHDIPNTMADACEEVSKLGV 104 (303)
T ss_dssp SHHHHHHHHHHTTT-SSCEEEECHHHHHHHTHHHHHHHHHHCCC---------EEEEEEEECSCHHHHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHhCC-CccEEEeCHHHHHHhCHHHHHHHHHhhCC---------CEEEEeeeccCchhHHHHHHHHHhcCC
Confidence 66777888887754 48999999763211113567777664211 23444433221 112344555667799
Q ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC-eE-EEcccCCCC-----------CCHHHHHHHHHHHH
Q 006969 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD-DV-EFSPEDAGR-----------SDRKFLYEILGEVI 244 (623)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~-~V-~f~~eda~r-----------~d~e~l~~~~~~~~ 244 (623)
+.+.+.....+ +++..+++.+++.|.. .+ .+.. -.+. .-.+.+.++++.+.
T Consensus 105 D~vTVHa~~G~---------------~~m~aa~e~a~~~~~~~~llaVtv-LTS~s~~~l~~l~~~~~~e~V~~lA~~a~ 168 (303)
T 3ru6_A 105 DMINIHASAGK---------------IAIQEVMTRLSKFSKRPLVLAVSA-LTSFDEENFFSIYRQKIEEAVINFSKISY 168 (303)
T ss_dssp SEEEEEGGGCH---------------HHHHHHHHHHTTSSSCCEEEEECS-CTTCCHHHHHHHHSSCHHHHHHHHHHHHH
T ss_pred CEEEEeccCCH---------------HHHHHHHHHHHhcCCCceEEEEEE-ecCCCHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 98877554432 4455666667666531 12 1211 1111 11245567778888
Q ss_pred HcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeE--EEeecCCcchH----HHHHHHHHHhCCCEE
Q 006969 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVI--STHCQNDLGLS----TANTIAGACAGARQV 310 (623)
Q Consensus 245 ~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i--~~H~HND~GlA----vANslaAv~aGA~~V 310 (623)
++|++.+.- .|.++ ..+|+.++..- +.+ |+-.-. -.++ ++|.-.|+++||+.+
T Consensus 169 ~~G~dGvV~-------s~~E~----~~IR~~~~~~f-l~VTPGIr~qG-~~~~DQ~Rv~t~~~a~~aGAd~i 227 (303)
T 3ru6_A 169 ENGLDGMVC-------SVFES----KKIKEHTSSNF-LTLTPGIRPFG-ETNDDQKRVANLAMARENLSDYI 227 (303)
T ss_dssp HTTCSEEEC-------CTTTH----HHHHHHSCTTS-EEEECCCCTTC---------CCSHHHHHHTTCSEE
T ss_pred HcCCCEEEE-------CHHHH----HHHHHhCCCcc-EEECCCcCccc-CCcccccccCCHHHHHHcCCCEE
Confidence 899887532 56553 45566554310 111 222211 1111 346778899999986
No 377
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=69.24 E-value=18 Score=36.29 Aligned_cols=116 Identities=15% Similarity=0.072 Sum_probs=69.1
Q ss_pred hHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc--C---CCC--------
Q 006969 164 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--D---AGR-------- 230 (623)
Q Consensus 164 dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e--d---a~r-------- 230 (623)
+++..++.++.+|.+.|-++.-.. + .-...+. .+..+.+++.|++.+.+... + ...
T Consensus 30 ~~~~~l~~~a~~G~~~VEl~~~~~--~--~~~~~~~-------~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~ 98 (303)
T 3l23_A 30 DVAANLRKVKDMGYSKLELAGYGK--G--AIGGVPM-------MDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKY 98 (303)
T ss_dssp CHHHHHHHHHHTTCCEEEECCEET--T--EETTEEH-------HHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSC
T ss_pred CHHHHHHHHHHcCCCEEEeccccC--c--ccCCCCH-------HHHHHHHHHcCCeEEEEecccccccccCccccccccc
Confidence 788888888999999999874210 0 0012222 34456678899863333211 1 000
Q ss_pred ------CCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCC--CCccee--EEEeecC
Q 006969 231 ------SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP--GIENVV--ISTHCQN 290 (623)
Q Consensus 231 ------~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~--~~~~v~--i~~H~HN 290 (623)
...+++.+.++.+.+.|+..|.++-.-....+..+..+++.+++..+ ....+. |.+|.|+
T Consensus 99 ~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En~~ 168 (303)
T 3l23_A 99 SKEVTPKIMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHN 168 (303)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred chhhHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEccCc
Confidence 11467788888899999999988622112355666666555544211 011478 9999997
No 378
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=69.17 E-value=20 Score=36.20 Aligned_cols=83 Identities=17% Similarity=0.225 Sum_probs=52.5
Q ss_pred CCCC-CCHHHHHHHHHHHHHcCCcEEeec------CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHH
Q 006969 227 DAGR-SDRKFLYEILGEVIKVGATTLNIP------DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 299 (623)
Q Consensus 227 da~r-~d~e~l~~~~~~~~~aGa~~I~l~------DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANs 299 (623)
|+++ .+++.+++-++.+++.||+.|-+. ...-+..-+|+.+++..++.... .+++|++=. +--.| +
T Consensus 22 DGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~--~~v~iSIDT---~~~~V--a 94 (270)
T 4hb7_A 22 DGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG--FDVKISVDT---FRSEV--A 94 (270)
T ss_dssp -----CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT--SSSEEEEEC---SCHHH--H
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhc--CCCeEEEEC---CCHHH--H
Confidence 5665 467888888999999999998873 22223334667766655554322 158898854 44444 4
Q ss_pred HHHHHhCCCEEEeccCC
Q 006969 300 IAGACAGARQVEVTING 316 (623)
Q Consensus 300 laAv~aGA~~Vd~Tv~G 316 (623)
.+|+++||+.|+=--.|
T Consensus 95 ~~al~aGa~iINDVs~g 111 (270)
T 4hb7_A 95 EACLKLGVDMINDQWAG 111 (270)
T ss_dssp HHHHHHTCCEEEETTTT
T ss_pred HHHHHhccceecccccc
Confidence 68999999999654344
No 379
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=69.11 E-value=9.4 Score=40.25 Aligned_cols=103 Identities=8% Similarity=-0.013 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
+..++.++-+++++.|.++|++.||-.+| +.+++..+++.+...- |.+.+=.-....+++..++.
T Consensus 202 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~i~~--- 266 (391)
T 2qgy_A 202 AVPEDLDQTKSFLKEVSSFNPYWIEEPVD---GENISLLTEIKNTFNM---------KVVTGEKQSGLVHFRELISR--- 266 (391)
T ss_dssp CCCSCHHHHHHHHHHHGGGCCSEEECSSC---TTCHHHHHHHHHHCSS---------CEEECTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCeEeCCCC---hhhHHHHHHHHhhCCC---------CEEEcCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 226 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e 226 (623)
..++.|.+ +..+---+..+.++++.|+++|+. +..+..
T Consensus 267 ~~~d~v~i-------------k~~~~GGit~~~~i~~~A~~~gi~-~~~~~~ 304 (391)
T 2qgy_A 267 NAADIFNP-------------DISGMGGLIDIIEISNEASNNGIF-ISPHCW 304 (391)
T ss_dssp TCCSEECC-------------BTTTSSCHHHHHHHHHHHHHTTCE-ECCBCC
T ss_pred CCCCEEEE-------------CcchhCCHHHHHHHHHHHHHCCCE-EeccCC
No 380
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=69.04 E-value=24 Score=35.84 Aligned_cols=91 Identities=14% Similarity=0.087 Sum_probs=58.3
Q ss_pred HhcCCCCEEEEEecCCHHHHHHHh------CCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCC-CCHHHHHHHHHHHH
Q 006969 172 VKYAKRPRIHTFIATSGIHMEHKL------RKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGR-SDRKFLYEILGEVI 244 (623)
Q Consensus 172 l~~a~~~~v~i~~~~Sd~h~~~~l------~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r-~d~e~l~~~~~~~~ 244 (623)
+..+|++.|- +..|- -+ ..+ ..|.+|++..+...++-++ ...|..+.+.++. .+++...+.+.++.
T Consensus 50 ~e~aG~d~il--vGdSl-~~-~~lG~~dt~~vTldemi~h~~aV~r~~~---~~~vvaD~pfgsy~~s~~~a~~na~rl~ 122 (281)
T 1oy0_A 50 FDEAGIPVLL--VGDSA-AN-VVYGYDTTVPISIDELIPLVRGVVRGAP---HALVVADLPFGSYEAGPTAALAAATRFL 122 (281)
T ss_dssp HHTTTCCEEE--ECTTH-HH-HTTCCSSSSSCCGGGTHHHHHHHHHHCT---TSEEEEECCTTSSTTCHHHHHHHHHHHH
T ss_pred HHHcCCCEEE--ECHHH-HH-HHcCCCCCCCCCHHHHHHHHHHHHhcCC---CCeEEEECCCCcccCCHHHHHHHHHHHH
Confidence 3456888773 33332 22 233 3578888776665544432 2235566666444 47888888666666
Q ss_pred H-cCCcEEeecCcccccCHHHHHHHHHHHHHh
Q 006969 245 K-VGATTLNIPDTVGITMPTEFGKLIADIKAN 275 (623)
Q Consensus 245 ~-aGa~~I~l~DTvG~~~P~~v~~li~~l~~~ 275 (623)
+ +||+.|.|-|. .++.+.|+.+.+.
T Consensus 123 ~eaGa~aVklEdg------~e~~~~I~al~~a 148 (281)
T 1oy0_A 123 KDGGAHAVKLEGG------ERVAEQIACLTAA 148 (281)
T ss_dssp HTTCCSEEEEEBS------GGGHHHHHHHHHH
T ss_pred HHhCCeEEEECCc------HHHHHHHHHHHHC
Confidence 5 99999999997 3677788888775
No 381
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=68.99 E-value=27 Score=35.30 Aligned_cols=38 Identities=8% Similarity=0.067 Sum_probs=15.6
Q ss_pred HHHHHHHHcCCCeEEEcccCCCC-CCHHHHHHHHHHHHH
Q 006969 208 SMVKFARSLGCDDVEFSPEDAGR-SDRKFLYEILGEVIK 245 (623)
Q Consensus 208 ~~v~~ak~~G~~~V~f~~eda~r-~d~e~l~~~~~~~~~ 245 (623)
+.+++|++.|.+.+-..+-.-.+ .+.+-+.+.++++.+
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~ 120 (293)
T 1w3i_A 82 RLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCE 120 (293)
T ss_dssp HHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHh
Confidence 34444445554433222222233 344444444444443
No 382
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=68.94 E-value=26 Score=38.44 Aligned_cols=72 Identities=21% Similarity=0.269 Sum_probs=52.3
Q ss_pred HHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccC
Q 006969 236 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 315 (623)
Q Consensus 236 l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~ 315 (623)
..+.++++.++|++.|.+-.+.| .+..+.++|+++++.+|+ +++.+-.=. -..-+..++++||+.|.+
T Consensus 257 ~~era~aLveaGvd~I~Id~a~g--~~~~v~~~i~~i~~~~~~---~~vi~g~v~----t~e~a~~~~~aGad~i~v--- 324 (511)
T 3usb_A 257 AMTRIDALVKASVDAIVLDTAHG--HSQGVIDKVKEVRAKYPS---LNIIAGNVA----TAEATKALIEAGANVVKV--- 324 (511)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTT---SEEEEEEEC----SHHHHHHHHHHTCSEEEE---
T ss_pred hHHHHHHHHhhccceEEeccccc--chhhhhhHHHHHHHhCCC---ceEEeeeec----cHHHHHHHHHhCCCEEEE---
Confidence 35667888999999999876654 456788999999999975 344432211 235578899999999986
Q ss_pred CccC
Q 006969 316 GIGE 319 (623)
Q Consensus 316 GlGE 319 (623)
|+|.
T Consensus 325 g~g~ 328 (511)
T 3usb_A 325 GIGP 328 (511)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 5544
No 383
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=68.93 E-value=18 Score=38.18 Aligned_cols=115 Identities=12% Similarity=0.077 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
+..++.++-+++++.|.++|++.||=-+| +.|++..+++++..+- |...+=.-....|++..++.
T Consensus 199 N~~~~~~~A~~~~~~L~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~i~~--- 263 (393)
T 4dwd_A 199 NNGYSVGGAIRVGRALEDLGYSWFEEPVQ---HYHVGAMGEVAQRLDI---------TVSAGEQTYTLQALKDLILS--- 263 (393)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCSEEECCSC---TTCHHHHHHHHHHCSS---------EEEBCTTCCSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEECCCC---cccHHHHHHHHhhCCC---------CEEecCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHH
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEIL 240 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~ 240 (623)
+++.| +++.++---+..+.+++..|+.+|+. +..... .+.......+.++
T Consensus 264 -~~d~v-------------~~k~~~~GGit~~~~ia~~A~~~gi~-~~~h~~-~~~i~~aa~~hla 313 (393)
T 4dwd_A 264 -GVRMV-------------QPDIVKMGGITGMMQCAALAHAHGVE-FVPHQT-QPGVGHFANIHVL 313 (393)
T ss_dssp -TCCEE-------------CCCTTTTTHHHHHHHHHHHHHHHTCE-ECCCCC-CSSHHHHHHHHHH
T ss_pred -CCCEE-------------EeCccccCCHHHHHHHHHHHHHcCCE-EeecCC-CcHHHHHHHHHHH
No 384
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=68.93 E-value=16 Score=36.58 Aligned_cols=92 Identities=15% Similarity=0.104 Sum_probs=62.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeec-CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHh--CC
Q 006969 231 SDRKFLYEILGEVIKVGATTLNIP-DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA--GA 307 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~aGa~~I~l~-DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~a--GA 307 (623)
.+++.+.+.++..++.||+.|-+. .......++++.+++..+++.. ++||++=+=+ -.-..+|+++ |+
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~----~~pisIDT~~-----~~v~~aAl~a~~Ga 92 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVS----NLTLCLDSTN-----IKAIEAGLKKCKNR 92 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTC----CSEEEEECSC-----HHHHHHHHHHCSSC
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhC----CCeEEEeCCC-----HHHHHHHHhhCCCC
Confidence 367889999999999999998876 2233456788999999998753 3788885443 3445677888 99
Q ss_pred CEEEeccCCccCccCcccHHHHHHHHHhcc
Q 006969 308 RQVEVTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 308 ~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
+.|+-- +|. .-++++++......+
T Consensus 93 ~iINdv-s~~-----~d~~~~~~~~~a~~~ 116 (262)
T 1f6y_A 93 AMINST-NAE-----REKVEKLFPLAVEHG 116 (262)
T ss_dssp EEEEEE-CSC-----HHHHHHHHHHHHHTT
T ss_pred CEEEEC-CCC-----cccHHHHHHHHHHhC
Confidence 999632 232 234556666555544
No 385
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=68.83 E-value=1.2e+02 Score=31.78 Aligned_cols=127 Identities=16% Similarity=0.156 Sum_probs=70.5
Q ss_pred HHHHHHHhHcCCCEEEEec-CCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCCEEEE
Q 006969 104 LDIARQLAKLGVDIIEAGF-PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHT 182 (623)
Q Consensus 104 l~Ia~~L~~~Gvd~IEvGf-P~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i 182 (623)
.+.++.|.++|+|.|++-. ...++.-.+.++.+.+..++ .+.+.+.+ ...++.+.+.++ |++.|.+
T Consensus 110 ~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~--------v~Vi~G~v-~t~e~A~~a~~a----GAD~I~v 176 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPH--------LEIIGGNV-ATAEGARALIEA----GVSAVKV 176 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTT--------CEEEEEEE-CSHHHHHHHHHH----TCSEEEE
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCC--------CceEeeee-CCHHHHHHHHHc----CCCEEEE
Confidence 4557888999999999843 22334345677887775321 13344322 245566665555 8998877
Q ss_pred Ee-cCC--HHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 006969 183 FI-ATS--GIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 254 (623)
Q Consensus 183 ~~-~~S--d~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~ 254 (623)
.. +.+ ..+.....+.. .+..+.++.+.++..++. |.- +++=.+++.+.+ +..+||+.+.+.
T Consensus 177 G~gpGs~~~tr~~~g~g~p---~~~~l~~v~~~~~~~~iP-VIA---~GGI~~~~di~k----ala~GAd~V~vG 240 (366)
T 4fo4_A 177 GIGPGSICTTRIVTGVGVP---QITAIADAAGVANEYGIP-VIA---DGGIRFSGDISK----AIAAGASCVMVG 240 (366)
T ss_dssp CSSCSTTBCHHHHHCCCCC---HHHHHHHHHHHHGGGTCC-EEE---ESCCCSHHHHHH----HHHTTCSEEEES
T ss_pred ecCCCCCCCcccccCcccc---hHHHHHHHHHHHhhcCCe-EEE---eCCCCCHHHHHH----HHHcCCCEEEEC
Confidence 21 111 11221222332 234455555666666765 332 455556665443 446799888764
No 386
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=68.78 E-value=54 Score=32.33 Aligned_cols=209 Identities=12% Similarity=0.061 Sum_probs=103.6
Q ss_pred ceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEecCCC-----ChhHHHHHHHHHHHhccccccCCCccce
Q 006969 79 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAA-----SKEDFEAVRTIAKEVGNAVDAESGYVPV 153 (623)
Q Consensus 79 ~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~-----s~~d~e~v~~i~~~~~~~~~~~~~l~~~ 153 (623)
++-|.-.++++ .++.++.+ +.+.++|++.||+.++.. .+.+.+.++.+.+..+-. +..
T Consensus 24 klgi~~~~~~~-------~~~~~~~l---~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~-------i~~ 86 (296)
T 2g0w_A 24 PITISSYTLGT-------EVSFPKRV---KVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMK-------VTE 86 (296)
T ss_dssp CEEECGGGGTT-------TSCHHHHH---HHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCE-------EEE
T ss_pred CceeechhcCC-------CCCHHHHH---HHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCc-------eEe
Confidence 46676677765 25666655 445678999999975311 122344555555442211 111
Q ss_pred EEeeccc---c------hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 006969 154 ICGLSRC---N------ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (623)
Q Consensus 154 i~~~~r~---~------~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~ 224 (623)
+..+... . .+.++.+++..+..|.+.|.+ .+.. ..+.+...+.+.++.++| .|+. +.+-
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~-g~~~--------~~~~~~~~~~l~~l~~~a--~Gv~-l~lE 154 (296)
T 2g0w_A 87 VEYITQWGTAEDRTAEQQKKEQTTFHMARLFGVKHINC-GLLE--------KIPEEQIIVALGELCDRA--EELI-IGLE 154 (296)
T ss_dssp EECBCCCSSTTTCCHHHHHHHHHHHHHHHHHTCCEEEE-CCCS--------CCCHHHHHHHHHHHHHHH--TTSE-EEEE
T ss_pred ehhhhccccCChHHHHHHHHHHHHHHHHHHcCCCEEEE-cCCC--------CCCHHHHHHHHHHHHHHh--cCCE-EEEE
Confidence 2211111 1 112344555555558887765 2211 124667778888888888 7764 4443
Q ss_pred cc-CCCCCCHHHHHHHHHHHHHcCCcEEee-cCcccc----cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHH
Q 006969 225 PE-DAGRSDRKFLYEILGEVIKVGATTLNI-PDTVGI----TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTAN 298 (623)
Q Consensus 225 ~e-da~r~d~e~l~~~~~~~~~aGa~~I~l-~DTvG~----~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvAN 298 (623)
+. ...-.+++.+.++++.+ +-..+.+ .||.=. ..|.+ .+ +.+. +-...+|++|..+....-
T Consensus 155 ~~~~~~~~~~~~~~~l~~~v---~~~~vgl~~D~~H~~~~g~d~~~------~~-~~~~---~~i~~vHl~D~~~~~~~~ 221 (296)
T 2g0w_A 155 FMPYSGVADLQAAWRVAEAC---GRDNAQLICDTWHWARANQTAES------IK-NVPA---DRIVSIQLCDVHETPYKE 221 (296)
T ss_dssp CCTTSSSCSHHHHHHHHHHH---TCTTEEEEEEHHHHHHTTCCGGG------GT-TCCG---GGEEEEEECBCCSSCCSS
T ss_pred ecCCCCCCCHHHHHHHHHHh---CCCCeEEEEehhHhhccCCCHHH------HH-hcCh---hhEEEEEecCCCCCCchh
Confidence 22 12234667676766654 3222222 255211 12221 11 1122 234678888865321000
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhccc
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~ 338 (623)
+.. ..+.++ .. .|+ |..+...++..|+..+.
T Consensus 222 -~~~-~~~~~r---~~--pG~--G~id~~~i~~~L~~~gy 252 (296)
T 2g0w_A 222 -LRE-ESLHDR---LA--PGE--GYGDTVGFAKILKEHGV 252 (296)
T ss_dssp -HHH-HHHHBC---BC--TTS--SSSCHHHHHHHHHHHTC
T ss_pred -hhh-HHHhcC---CC--CCC--CCccHHHHHHHHHHcCC
Confidence 000 000011 12 344 88999999999987653
No 387
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=68.62 E-value=1.1e+02 Score=31.56 Aligned_cols=165 Identities=12% Similarity=0.058 Sum_probs=93.0
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCC
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~ 178 (623)
+.++-.+-++.+.+.|++.|-+=.......|.+.++.+.+.++..+ ...+=+-.+...++..+.++.+...++.
T Consensus 140 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~~g~~~------~l~vDaN~~~~~~~A~~~~~~l~~~~i~ 213 (368)
T 3q45_A 140 EPHKMAADAVQIKKNGFEIIKVKVGGSKELDVERIRMIREAAGDSI------TLRIDANQGWSVETAIETLTLLEPYNIQ 213 (368)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHHCSSS------EEEEECTTCBCHHHHHHHHHHHGGGCCS
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCHHHHHHHHHHHHHHhCCCC------eEEEECCCCCChHHHHHHHHHHhhcCCC
Confidence 6788888888888999998877432223567889999988775431 1122222223344443445566666766
Q ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcC-CcEEeecCcc
Q 006969 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG-ATTLNIPDTV 257 (623)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aG-a~~I~l~DTv 257 (623)
.|.=.++..+ ++ .+.+..+..++. |.. |.+-+++..+.++ ++.| ++.|+ +|..
T Consensus 214 ~iEqP~~~~~--------------~~---~~~~l~~~~~iP-Ia~---dE~~~~~~~~~~~----~~~~~~d~v~-~k~~ 267 (368)
T 3q45_A 214 HCEEPVSRNL--------------YT---ALPKIRQACRIP-IMA---DESCCNSFDAERL----IQIQACDSFN-LKLS 267 (368)
T ss_dssp CEECCBCGGG--------------GG---GHHHHHHTCSSC-EEE---STTCCSHHHHHHH----HHTTCCSEEE-ECTT
T ss_pred EEECCCChhH--------------HH---HHHHHHhhCCCC-EEE---cCCcCCHHHHHHH----HHcCCCCeEE-echh
Confidence 6553222211 11 122222334554 432 4555666655443 4455 55554 4555
Q ss_pred cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH
Q 006969 258 GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 300 (623)
Q Consensus 258 G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl 300 (623)
=+.-..+..++....+++ ++++.+||....+++++.++
T Consensus 268 ~~GGit~~~~i~~~A~~~-----gi~~~~~~~~es~i~~aa~~ 305 (368)
T 3q45_A 268 KSAGITNALNIIRLAEQA-----HMPVQVGGFLESRLGFTAAA 305 (368)
T ss_dssp TTTSHHHHHHHHHHHHHT-----TCCEEECCSSCCHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHc-----CCcEEecCccccHHHHHHHH
Confidence 555566667777766654 25688888877777776544
No 388
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=68.54 E-value=7.8 Score=36.60 Aligned_cols=69 Identities=14% Similarity=0.136 Sum_probs=49.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 231 SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
.+++.+.++++.+.+.|++.|.+.= .+|. ..+.++.+|+.+|. +..|++....+. .-+..|+++||+.|
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~----~~~~-~~~~i~~ir~~~~~--~~~ig~~~v~~~----~~~~~a~~~Gad~i 87 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITF----TVPD-ADTVIKELSFLKEK--GAIIGAGTVTSV----EQCRKAVESGAEFI 87 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEET----TSTT-HHHHHHHTHHHHHT--TCEEEEESCCSH----HHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeC----CChh-HHHHHHHHHHHCCC--CcEEEecccCCH----HHHHHHHHcCCCEE
Confidence 4678899999999999999986631 2343 34568888887752 367887552232 34688899999999
No 389
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=68.50 E-value=16 Score=38.12 Aligned_cols=102 Identities=14% Similarity=0.203 Sum_probs=64.6
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
+..++.++-+++++.|.++|++.||=-+| +.|++..+++++..+ +|...+=.-....|++..++.
T Consensus 192 N~~~~~~~A~~~~~~l~~~~i~~iEqP~~---~~~~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~~~~--- 256 (368)
T 3q45_A 192 NQGWSVETAIETLTLLEPYNIQHCEEPVS---RNLYTALPKIRQACR---------IPIMADESCCNSFDAERLIQI--- 256 (368)
T ss_dssp TTCBCHHHHHHHHHHHGGGCCSCEECCBC---GGGGGGHHHHHHTCS---------SCEEESTTCCSHHHHHHHHHT---
T ss_pred CCCCChHHHHHHHHHHhhcCCCEEECCCC---hhHHHHHHHHHhhCC---------CCEEEcCCcCCHHHHHHHHHc---
Confidence 34578999999999999999999997443 456777777776432 133222111245566655442
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ 225 (623)
...+.|.+ ..+ +---+..+.+.++.|+++|+. +..+.
T Consensus 257 ~~~d~v~~--k~~-----------~~GGit~~~~i~~~A~~~gi~-~~~~~ 293 (368)
T 3q45_A 257 QACDSFNL--KLS-----------KSAGITNALNIIRLAEQAHMP-VQVGG 293 (368)
T ss_dssp TCCSEEEE--CTT-----------TTTSHHHHHHHHHHHHHTTCC-EEECC
T ss_pred CCCCeEEe--chh-----------hcCCHHHHHHHHHHHHHcCCc-EEecC
Confidence 34566544 111 112255677889999999987 66654
No 390
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=68.50 E-value=23 Score=36.09 Aligned_cols=102 Identities=15% Similarity=0.129 Sum_probs=73.6
Q ss_pred HHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEe-ec-Ccccc-cCHHHHHHHHHHHHH--hCCCCcc
Q 006969 207 RSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLN-IP-DTVGI-TMPTEFGKLIADIKA--NTPGIEN 281 (623)
Q Consensus 207 ~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~-l~-DTvG~-~~P~~v~~li~~l~~--~~~~~~~ 281 (623)
+++.+.|++.|+-.-.|+. .+.+.+..+++++.+.+...|. +. .+..+ +-+..+..++..+.+ .. +
T Consensus 10 ~~ll~~A~~~~yAV~AfNv-----~n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~----~ 80 (288)
T 3q94_A 10 KEMLNKALEGKYAVGQFNM-----NNLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNI----T 80 (288)
T ss_dssp HHHHHHHHHHTCCEEEEEC-----CSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTC----C
T ss_pred HHHHHHHHHCCcEEEEEee-----CCHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCC----C
Confidence 5678889999886335665 5779999999999999876543 33 34445 344557788887776 43 3
Q ss_pred eeEEEeecCCcchHHHHHHHHHHhCCCE--EEeccCCccC
Q 006969 282 VVISTHCQNDLGLSTANTIAGACAGARQ--VEVTINGIGE 319 (623)
Q Consensus 282 v~i~~H~HND~GlAvANslaAv~aGA~~--Vd~Tv~GlGE 319 (623)
+|+.+|. |-|....-...|+++|.+- +|+|-..+-|
T Consensus 81 VPValHl--DHg~~~e~i~~ai~~GFtSVMiDgS~~p~ee 118 (288)
T 3q94_A 81 VPVAIHL--DHGSSFEKCKEAIDAGFTSVMIDASHHPFEE 118 (288)
T ss_dssp SCEEEEE--EEECSHHHHHHHHHHTCSEEEECCTTSCHHH
T ss_pred CcEEEEC--CCCCCHHHHHHHHHcCCCeEEEeCCCCCHHH
Confidence 7788765 4455677889999999986 6998876644
No 391
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=68.42 E-value=16 Score=37.97 Aligned_cols=119 Identities=12% Similarity=0.161 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
+..++.++-+++++.|.++|++.||=-+| +.|++..+++++..+- |...+=.-....|++..++.
T Consensus 191 n~~~~~~~a~~~~~~L~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~l~~--- 255 (354)
T 3jva_A 191 NQAWTPKDAVKAIQALADYQIELVEQPVK---RRDLEGLKYVTSQVNT---------TIMADESCFDAQDALELVKK--- 255 (354)
T ss_dssp TTCSCHHHHHHHHHHTTTSCEEEEECCSC---TTCHHHHHHHHHHCSS---------EEEESTTCCSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEECCCC---hhhHHHHHHHHHhCCC---------CEEEcCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccC-CCCCCHHHHHHHHHH
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED-AGRSDRKFLYEILGE 242 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ed-a~r~d~e~l~~~~~~ 242 (623)
...+.|.+ +.++---+..+.+.++.|+++|+. +..+... .+.......+.++.+
T Consensus 256 ~~~d~v~~-------------k~~~~GGit~~~~i~~~A~~~gi~-~~~~~~~~es~i~~~a~~hlaaa 310 (354)
T 3jva_A 256 GTVDVINI-------------KLMKCGGIHEALKINQICETAGIE-CMIGCMAEETTIGITAAAHLAAA 310 (354)
T ss_dssp TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHTTCE-EEECCCTTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEE-------------CchhcCCHHHHHHHHHHHHHcCCe-EEecCCCcccHHHHHHHHHHHhc
No 392
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=68.41 E-value=15 Score=36.18 Aligned_cols=191 Identities=18% Similarity=0.190 Sum_probs=99.6
Q ss_pred HHHHHHHHhHcCCCEEEEe----cCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCC
Q 006969 103 KLDIARQLAKLGVDIIEAG----FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (623)
Q Consensus 103 Kl~Ia~~L~~~Gvd~IEvG----fP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~ 178 (623)
=+++|+...+.|+|++=+= ...-.+..++.++.+++.+. .|.-.|=+-...++++..+++ |++
T Consensus 33 P~~~a~~~~~~gad~lhvvDld~a~~~~~~~~~~i~~i~~~~~---------~pl~vGGGIrs~e~~~~~l~~----Gad 99 (243)
T 4gj1_A 33 PLKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAKEVS---------VNLQVGGGIRSKEEVKALLDC----GVK 99 (243)
T ss_dssp HHHHHHHHHHHTCCEEEEEEHHHHHCGGGCCHHHHHHHHHHCC---------SEEEEESSCCCHHHHHHHHHT----TCS
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccccchhHHHHHHHHHHhcC---------CCeEeccccccHHHHHHHHHc----CCC
Confidence 4667888999999977652 11122345688888888642 133233333356777776664 999
Q ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc-----------cCCCCC-CHHHHHHHHHHHHHc
Q 006969 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-----------EDAGRS-DRKFLYEILGEVIKV 246 (623)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~-----------eda~r~-d~e~l~~~~~~~~~a 246 (623)
+|.+-...- ..+ +. +. +.++..|-..+..+. .+.++. ..-.+.++++.+.+.
T Consensus 100 kVii~t~a~---------~~p-~l---i~---e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~ 163 (243)
T 4gj1_A 100 RVVIGSMAI---------KDA-TL---CL---EILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNK 163 (243)
T ss_dssp EEEECTTTT---------TCH-HH---HH---HHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTT
T ss_pred EEEEccccc---------cCC-ch---HH---HHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhc
Confidence 986633221 111 22 22 223344533222111 011111 112256778888899
Q ss_pred CCcEEeec--CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccCccCcc
Q 006969 247 GATTLNIP--DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNA 324 (623)
Q Consensus 247 Ga~~I~l~--DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGERaGNa 324 (623)
|+..|.+- |..|.+.-..+ ++++.+.+.+++ +|+-.. -|.+--.=+..+..+++ +.+.|--=-.|..
T Consensus 164 g~~eil~t~Id~DGt~~G~d~-~l~~~l~~~~~~---ipvias----GGv~~~~Dl~~l~~~~~---gvivg~Al~~g~i 232 (243)
T 4gj1_A 164 GLKHILCTDISKDGTMQGVNV-RLYKLIHEIFPN---ICIQAS----GGVASLKDLENLKGICS---GVIVGKALLDGVF 232 (243)
T ss_dssp TCCEEEEEETTC-----CCCH-HHHHHHHHHCTT---SEEEEE----SCCCSHHHHHHTTTTCS---EEEECHHHHTTSS
T ss_pred CCcEEEeeeecccccccCCCH-HHHHHHHHhcCC---CCEEEE----cCCCCHHHHHHHHccCc---hhehHHHHHCCCC
Confidence 99988775 77888876655 477888887764 455443 23333344455555533 3344322234667
Q ss_pred cHHHHHHHH
Q 006969 325 SLEEVVMAF 333 (623)
Q Consensus 325 ~lEevv~~L 333 (623)
+++|++..|
T Consensus 233 ~l~ea~~~l 241 (243)
T 4gj1_A 233 SVEEGIRCL 241 (243)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHh
Confidence 777766544
No 393
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=68.35 E-value=89 Score=30.22 Aligned_cols=196 Identities=10% Similarity=0.043 Sum_probs=97.7
Q ss_pred CCHHHHHHHHHHHhHcCC-CEEEEecCCCCh-hHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcC
Q 006969 98 LTSKEKLDIARQLAKLGV-DIIEAGFPAASK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gv-d~IEvGfP~~s~-~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 175 (623)
|-..-...+-+.+.+.|+ +.+-.. ....+ .+.+.++.+... .+. + |.... ......+..++.++..
T Consensus 16 ~~~~~~~gi~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~---~vd---g----iii~~-~~~~~~~~~~~~~~~~ 83 (309)
T 2fvy_A 16 FMSVVRKAIEQDAKAAPDVQLLMND-SQNDQSKQNDQIDVLLAK---GVK---A----LAINL-VDPAAAGTVIEKARGQ 83 (309)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEEEE-CTTCHHHHHHHHHHHHHT---TCS---E----EEECC-SSGGGHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEec-CCCCHHHHHHHHHHHHHc---CCC---E----EEEeC-CCcchhHHHHHHHHHC
Confidence 445566677778888997 554332 22222 233455555432 111 1 21111 1222233445556667
Q ss_pred CCCEEEEEecCCHHHH-----HHHhCCCHHHHHHHHHHHHHHHHH------------cCCCeEEE-cccCCCCCCHHHHH
Q 006969 176 KRPRIHTFIATSGIHM-----EHKLRKTKQQVVEIARSMVKFARS------------LGCDDVEF-SPEDAGRSDRKFLY 237 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~-----~~~l~~t~ee~l~~~~~~v~~ak~------------~G~~~V~f-~~eda~r~d~e~l~ 237 (623)
+++.|.+-....+... ......+.. +....+++++.+ +|...|.| +.........+.+.
T Consensus 84 ~iPvV~~~~~~~~~~~~~~~~~~~V~~d~~---~~g~~~~~~L~~~~~~~~~~~~~g~g~~~i~~i~~~~~~~~~~~R~~ 160 (309)
T 2fvy_A 84 NVPVVFFNKEPSRKALDSYDKAYYVGTDSK---ESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEARTT 160 (309)
T ss_dssp TCCEEEESSCCCHHHHHTCTTEEEEECCHH---HHHHHHHHHHHHHHHHCGGGCTTCSSSEEEEEEECSTTCHHHHHHHH
T ss_pred CCcEEEecCCCCcccccccCccEEEecCHH---HHHHHHHHHHHHHHhhcccccccCCCceEEEEEEcCCCCccHHHHHH
Confidence 8888765433222100 001233433 334455566555 66544433 32212223345566
Q ss_pred HHHHHHHHcCCcE--EeecCcccccCHHHHHHHHHHHHHhCC--CCcceeEEEeecCCcchHHHHHHHHHHhCCCEE-Ee
Q 006969 238 EILGEVIKVGATT--LNIPDTVGITMPTEFGKLIADIKANTP--GIENVVISTHCQNDLGLSTANTIAGACAGARQV-EV 312 (623)
Q Consensus 238 ~~~~~~~~aGa~~--I~l~DTvG~~~P~~v~~li~~l~~~~~--~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V-d~ 312 (623)
-+.+++.+.|... ..+. .|-..+....+.++.+.+..| +. =.+-|.||. +|++-..++-++| - |.
T Consensus 161 gf~~~l~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~----~ai~~~~d~-~a~g~~~al~~~g---~~di 230 (309)
T 2fvy_A 161 YVIKELNDKGIKTEQLQLD--TAMWDTAQAKDKMDAWLSGPNANKI----EVVIANNDA-MAMGAVEALKAHN---KSSI 230 (309)
T ss_dssp HHHHHHHHTTCCEEEEEEE--ECTTCHHHHHHHHHHHHTSTTGGGC----CEEEESSHH-HHHHHHHHHHHTT---CTTS
T ss_pred HHHHHHHhcCCceEEEEEe--cCCCCHHHHHHHHHHHHHhCCCCCc----cEEEECCch-hHHHHHHHHHHcC---CCCc
Confidence 6677777888642 1111 233467777777777766543 22 255578764 5555444455667 3 56
Q ss_pred ccCCcc
Q 006969 313 TINGIG 318 (623)
Q Consensus 313 Tv~GlG 318 (623)
+|.|++
T Consensus 231 ~vig~d 236 (309)
T 2fvy_A 231 PVFGVD 236 (309)
T ss_dssp CEECSB
T ss_pred eEEecC
Confidence 788775
No 394
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=68.21 E-value=1.6e+02 Score=32.96 Aligned_cols=160 Identities=21% Similarity=0.268 Sum_probs=101.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
.+|..++..|- ...+.|+|.|=+-|.. +++|.+.++.+.+..+.. ...+.+.| . +.+.++. ++.+...
T Consensus 170 ~ltekD~~di~-~~l~~g~d~v~~sfV~-~a~dv~~~~~~l~~~~~~---~~~iiakI---E--~~eav~n-ldeIl~~- 237 (587)
T 2e28_A 170 GITEKDRADIL-FGIRQGIDFIAASFVR-RASDVLEIRELLEAHDAL---HIQIIAKI---E--NEEGVAN-IDEILEA- 237 (587)
T ss_dssp SCCHHHHHHHH-HHHHHTCSEEEESSCC-SHHHHHHHHHHHHHTTCT---TSEEEEEE---C--SHHHHHT-HHHHHHH-
T ss_pred CCCcccHHHHH-HHHHcCCCEEEECCCC-CHHHHHHHHHHHHHcCCC---CceEEEEE---C--CHHHHHh-HHHHHHh-
Confidence 46778887764 5567899999998864 677877777766543210 00111222 1 2333322 2222111
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------cccCCCCCCHHHHHHHHHHHHHcCCcE
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGATT 250 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~~eda~r~d~e~l~~~~~~~~~aGa~~ 250 (623)
.+. ++++-.|+-++ +..+++....++.++.|+++|+. |.+ |.....+-....+.+++.++.+ |+|.
T Consensus 238 ~Dg--ImVargDLgve----i~~~~v~~~qk~ii~~~~~~gkp-vi~ATQmLeSMi~~p~PTRAE~sDvanav~d-G~Da 309 (587)
T 2e28_A 238 ADG--LMVARGDLGVE----IPAEEVPLIQKLLIKKSNMLGKP-VITATQMLDSMQRNPRPTRAEASDVANAIFD-GTDA 309 (587)
T ss_dssp SSE--EEEEHHHHHHH----SCGGGHHHHHHHHHHHHHHHTCC-EEEESSSSGGGGTCSSCCHHHHHHHHHHHHH-TCSE
T ss_pred CCE--EEEcCchhhhh----cCHHHHHHHHHHHHHHHHHcCCC-eEEechhhHhhccCCCccHHHHhccchhhhh-Ccce
Confidence 244 55666665554 23477777778899999999986 655 2334456667888888888765 9999
Q ss_pred Eeec-CcccccCHHHHHHHHHHHHHhC
Q 006969 251 LNIP-DTVGITMPTEFGKLIADIKANT 276 (623)
Q Consensus 251 I~l~-DTvG~~~P~~v~~li~~l~~~~ 276 (623)
+.|. -|.-...|.+.-+.+..+....
T Consensus 310 vMLSgETA~G~yPveaV~~m~~I~~~~ 336 (587)
T 2e28_A 310 VMLSGETAAGQYPVEAVKTMHQIALRT 336 (587)
T ss_dssp EEESHHHHTCSCHHHHHHHHHHHHHHH
T ss_pred eeecccccCCCCHHHHHHHHHHHHHHH
Confidence 9995 6777789988877777665543
No 395
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=68.09 E-value=26 Score=36.65 Aligned_cols=79 Identities=8% Similarity=-0.021 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHcCCcEEee-------------------cCcccccC---HHHHHHHHHHHHHhCCCCcceeEEE--eec
Q 006969 234 KFLYEILGEVIKVGATTLNI-------------------PDTVGITM---PTEFGKLIADIKANTPGIENVVIST--HCQ 289 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l-------------------~DTvG~~~---P~~v~~li~~l~~~~~~~~~v~i~~--H~H 289 (623)
+.+.+.++.+.++|.|.|-| .|-.|... +..+.++|+.+|+.++. + +|++ .++
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~--~-pv~vris~~ 237 (365)
T 2gou_A 161 ADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGA--E-RVGVRLAPL 237 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCG--G-GEEEEECSS
T ss_pred HHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCC--C-cEEEEEccc
Confidence 45667777788999998887 23444442 33467889999988853 2 4555 333
Q ss_pred CC-----cch----HHHHHHHHHHhCCCEEEeccC
Q 006969 290 ND-----LGL----STANTIAGACAGARQVEVTIN 315 (623)
Q Consensus 290 ND-----~Gl----AvANslaAv~aGA~~Vd~Tv~ 315 (623)
+. -|. ++.-+....++|++.|+++-.
T Consensus 238 ~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~ 272 (365)
T 2gou_A 238 TTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEV 272 (365)
T ss_dssp CCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 21 122 233345566789999998754
No 396
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=67.95 E-value=64 Score=32.72 Aligned_cols=205 Identities=16% Similarity=0.044 Sum_probs=113.3
Q ss_pred HHHHhHcCCCEEEEec---------CCCChhH----HHHHHHHHHHhccccccCCCccceEEe----ecccchhhHHHHH
Q 006969 107 ARQLAKLGVDIIEAGF---------PAASKED----FEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKTAW 169 (623)
Q Consensus 107 a~~L~~~Gvd~IEvGf---------P~~s~~d----~e~v~~i~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~a~ 169 (623)
++.++++||+.|=+|. |...+-. ...++.|++... .|.++. |+ ....+-+..
T Consensus 28 A~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~---------~PviaD~d~Gyg--~~~~~~~~v 96 (290)
T 2hjp_A 28 AKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVS---------IPLIADIDTGFG--NAVNVHYVV 96 (290)
T ss_dssp HHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCS---------SCEEEECTTTTS--SHHHHHHHH
T ss_pred HHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCC---------CCEEEECCCCCC--CHHHHHHHH
Confidence 6777889999998872 3322222 344555554321 133332 22 344454444
Q ss_pred HHHhcCCCCEEEEEecCCHH---HHH--HHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC--CCCHHHHHHHHHH
Q 006969 170 EAVKYAKRPRIHTFIATSGI---HME--HKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG--RSDRKFLYEILGE 242 (623)
Q Consensus 170 eal~~a~~~~v~i~~~~Sd~---h~~--~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~--r~d~e~l~~~~~~ 242 (623)
..+..+|+..|+|-...++- |+. .+-=.+.++..+++..+++....-|+ .|.--. |+. ....+.+++=+++
T Consensus 97 ~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~-~i~aRt-da~~a~~g~~~ai~Ra~a 174 (290)
T 2hjp_A 97 PQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDF-VVIARV-EALIAGLGQQEAVRRGQA 174 (290)
T ss_dssp HHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTS-EEEEEE-CTTTTTCCHHHHHHHHHH
T ss_pred HHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCc-EEEEee-hHhhccccHHHHHHHHHH
Confidence 44555799999998776531 332 11113556666666655544333233 122211 221 2346888888899
Q ss_pred HHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-CCEEEeccCCccCcc
Q 006969 243 VIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQVEVTINGIGERA 321 (623)
Q Consensus 243 ~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A~~Vd~Tv~GlGERa 321 (623)
..++|||.|.+.=. .-.|+++.++.+.+... +|+-+-+-.-..+ ..-.--+.| +++|-..... -|+
T Consensus 175 y~eAGAd~i~~e~~--~~~~~~~~~i~~~~~~~------vP~i~n~~~~~~~---~~~eL~~lG~v~~v~~~~~~--~ra 241 (290)
T 2hjp_A 175 YEEAGADAILIHSR--QKTPDEILAFVKSWPGK------VPLVLVPTAYPQL---TEADIAALSKVGIVIYGNHA--IRA 241 (290)
T ss_dssp HHHTTCSEEEECCC--CSSSHHHHHHHHHCCCS------SCEEECGGGCTTS---CHHHHHTCTTEEEEEECSHH--HHH
T ss_pred HHHcCCcEEEeCCC--CCCHHHHHHHHHHcCCC------CCEEEeccCCCCC---CHHHHHhcCCeeEEEechHH--HHH
Confidence 99999999998531 34467776666555322 3454432211112 223444568 8887544443 377
Q ss_pred CcccHHHHHHHHHhcc
Q 006969 322 GNASLEEVVMAFKCRG 337 (623)
Q Consensus 322 GNa~lEevv~~L~~~~ 337 (623)
-+..+++++..|...|
T Consensus 242 a~~a~~~~~~~i~~~g 257 (290)
T 2hjp_A 242 AVGAVREVFARIRRDG 257 (290)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcC
Confidence 8888888888887755
No 397
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=67.71 E-value=75 Score=31.62 Aligned_cols=144 Identities=11% Similarity=0.102 Sum_probs=80.0
Q ss_pred eEEEeCCCcccCCCCCCCCCHHHH-------HHHHHHHhHcCCCEEEEec-----CCCChhHHHHHHHHHHHhc-ccccc
Q 006969 80 VRVFDTTLRDGEQSPGATLTSKEK-------LDIARQLAKLGVDIIEAGF-----PAASKEDFEAVRTIAKEVG-NAVDA 146 (623)
Q Consensus 80 v~I~DtTLRDG~Q~~g~~~t~e~K-------l~Ia~~L~~~Gvd~IEvGf-----P~~s~~d~e~v~~i~~~~~-~~~~~ 146 (623)
+.++-+.++.| ..+.++. .+.++.|.+.|+|.|=++- ......+...++.|.+... |. +
T Consensus 55 ~~~~~ar~~~~------~v~~~~l~~~~~~l~~aa~~L~~~g~d~IviaCnta~~~~G~~~~~~~~~~l~~~~~~~~-~- 126 (273)
T 2xed_A 55 FSFHSTRMRMH------TVSPEGLAAMNAQRERCVLEIADAAPEVILYACLVAVMVGGPGEHHRVESAVAEQLATGG-S- 126 (273)
T ss_dssp EEEEEEEECCC------BCSHHHHHHHHTTHHHHHHHHHTTCCSEEEECCHHHHHTTCTTHHHHHHHHHHHHHHHTT-C-
T ss_pred eEEEEeCCccC------CCCHHHHHHHHHHHHHHHHHHhhcCCCEEEECCChHHHhcccchhHHHHHHHHHHhhccC-C-
Confidence 66666667776 2334432 3467888899999998852 1111123344555555431 10 0
Q ss_pred CCCccceEEeecccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc
Q 006969 147 ESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 226 (623)
Q Consensus 147 ~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e 226 (623)
-+|.+. -.+...++++..|..+|.+..+... .......++.++.|++.+.....
T Consensus 127 ---~iPv~~--------~~~A~~~al~~~g~~rvgvltp~~~---------------~~~~~~~~~l~~~Gi~v~~~~~~ 180 (273)
T 2xed_A 127 ---QALVRS--------SAGALVEGLRALDAQRVALVTPYMR---------------PLAEKVVAYLEAEGFTISDWRAL 180 (273)
T ss_dssp ---CCEEEE--------HHHHHHHHHHHTTCCEEEEEECSCH---------------HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ---CCCEec--------HHHHHHHHHHHcCCCeEEEEcCChh---------------hhHHHHHHHHHHCCCEEeccccC
Confidence 023331 1233444555457789999865432 11123446666789863333221
Q ss_pred C------CCCCCHHHHHHHHHHHHHcCCcEEeec-Ccc
Q 006969 227 D------AGRSDRKFLYEILGEVIKVGATTLNIP-DTV 257 (623)
Q Consensus 227 d------a~r~d~e~l~~~~~~~~~aGa~~I~l~-DTv 257 (623)
+ .++.+++.+.++++.+.+.|++.|.|. -|.
T Consensus 181 ~~~~~~~~g~~~~~~l~~~~~~l~~~gadaIvLg~CT~ 218 (273)
T 2xed_A 181 EVADNTEVGCIPGEQVMAAARSLDLSEVDALVISCAVQ 218 (273)
T ss_dssp CCCBHHHHHTCCHHHHHHHHHHSCCTTCSEEEEESSSS
T ss_pred CCccchhhcccCHHHHHHHHHHHhhCCCCEEEEcCCCC
Confidence 1 225567778888888866789999987 443
No 398
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=67.36 E-value=14 Score=38.58 Aligned_cols=103 Identities=13% Similarity=0.087 Sum_probs=75.8
Q ss_pred cccC-CCCCCHHHHHHHHHHHHHcCCcEEeecCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEe-ecCCcchHHHH
Q 006969 224 SPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTAN 298 (623)
Q Consensus 224 ~~ed-a~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H-~HND~GlAvAN 298 (623)
.|.+ .+..|.+-+.++++.+++.|++.|.++=|+|= ++++|-.++++. .. .+ +++|-++ .+|+.--++..
T Consensus 36 TPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~--~g--rvpViaGvg~~st~eai~l 110 (344)
T 2hmc_A 36 TPCRQDRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-LV--KA--GIPVIVGTGAVNTASAVAH 110 (344)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-HH--HT--TCCEEEECCCSSHHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-Hh--CC--CCcEEEecCCCCHHHHHHH
Confidence 4543 35789999999999999999999999999885 688888888887 22 12 2344444 57888889999
Q ss_pred HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHH
Q 006969 299 TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (623)
Q Consensus 299 slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~ 334 (623)
+..|-++||+.+=..---+-.. .+-++++..++
T Consensus 111 a~~A~~~Gadavlv~~P~y~~~---~s~~~l~~~f~ 143 (344)
T 2hmc_A 111 AVHAQKVGAKGLMVIPRVLSRG---SVIAAQKAHFK 143 (344)
T ss_dssp HHHHHHHTCSEEEECCCCSSST---TCHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCccCCC---CCHHHHHHHHH
Confidence 9999999999987765544221 23456665544
No 399
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=67.30 E-value=14 Score=38.47 Aligned_cols=70 Identities=16% Similarity=0.229 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHHcCCcEEeecCccc-----------ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH
Q 006969 232 DRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 300 (623)
Q Consensus 232 d~e~l~~~~~~~~~aGa~~I~l~DTvG-----------~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl 300 (623)
.++.+.+.++...+.|++.|.+.-+-| ...|+++.++++..++. ++++.+|++.+. ...
T Consensus 173 ~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~-----g~~v~~H~~~~~-----~i~ 242 (426)
T 2r8c_A 173 GVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGR-----GTYVLAHAYTPA-----AIA 242 (426)
T ss_dssp SHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHT-----TCCEEEEECSHH-----HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHc-----CCEEEEEeCChH-----HHH
Confidence 455666666666666776665543322 56889999999998874 256999999543 356
Q ss_pred HHHHhCCCEEE
Q 006969 301 AGACAGARQVE 311 (623)
Q Consensus 301 aAv~aGA~~Vd 311 (623)
.++++|++.|+
T Consensus 243 ~al~~G~~~i~ 253 (426)
T 2r8c_A 243 RAVRCGVRTIE 253 (426)
T ss_dssp HHHHTTCSEEE
T ss_pred HHHHcCCCEEe
Confidence 78889998874
No 400
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=67.22 E-value=22 Score=36.49 Aligned_cols=119 Identities=13% Similarity=0.105 Sum_probs=80.7
Q ss_pred HHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEe-ec-CcccccCHHHHHHHHHHHHHhCCCCccee
Q 006969 206 ARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLN-IP-DTVGITMPTEFGKLIADIKANTPGIENVV 283 (623)
Q Consensus 206 ~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~-l~-DTvG~~~P~~v~~li~~l~~~~~~~~~v~ 283 (623)
.+++.+.|++.|+-.-.|+. .+.+.+..+++++.+.+...|. +. .+..++-..-+..++..+.+... ++|
T Consensus 5 ~~~ll~~A~~~~yAV~AfNv-----~n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~---~VP 76 (307)
T 3n9r_A 5 GNEILLKAHKEGYGVGAFNF-----VNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYP---HIP 76 (307)
T ss_dssp HHHHHHHHHHHTCCEEEEEC-----SSHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHST---TSC
T ss_pred HHHHHHHHHHcCceEEEEee-----CCHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHhcC---CCc
Confidence 45778899999986335665 5779999999999999876543 32 34445555667778877776633 367
Q ss_pred EEEeecCCcchHHHHHHHHHHhCCCE--EEeccCCccCccCcc-cHHHHHHHHHhcc
Q 006969 284 ISTHCQNDLGLSTANTIAGACAGARQ--VEVTINGIGERAGNA-SLEEVVMAFKCRG 337 (623)
Q Consensus 284 i~~H~HND~GlAvANslaAv~aGA~~--Vd~Tv~GlGERaGNa-~lEevv~~L~~~~ 337 (623)
+.+|. |-|.-..-...|+++|.+- +|+|-..+-| |. -+-+++...+.+|
T Consensus 77 ValHL--DHg~~~e~~~~ai~~GFtSVMiDgS~~p~ee---Ni~~Tk~vv~~ah~~g 128 (307)
T 3n9r_A 77 VALHL--DHGTTFESCEKAVKAGFTSVMIDASHHAFEE---NLELTSKVVKMAHNAG 128 (307)
T ss_dssp EEEEE--EEECSHHHHHHHHHHTCSEEEECCTTSCHHH---HHHHHHHHHHHHHHTT
T ss_pred EEEEC--CCCCCHHHHHHHHHhCCCcEEEECCCCCHHH---HHHHHHHHHHHHHHcC
Confidence 88765 4444578889999999986 6998886654 32 2334444444443
No 401
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=67.17 E-value=14 Score=40.23 Aligned_cols=67 Identities=19% Similarity=0.146 Sum_probs=48.8
Q ss_pred HHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 237 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
.+.++++.++|++.|.|-=+.| .+..+.++|+.+++.+|+ +++..- ......-+..++++||+.|.+
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g--~~~~~~~~v~~i~~~~p~---~~Vi~g----~v~t~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHG--HSKGVIERVRWVKQTFPD---VQVIGG----NIATAEAAKALAEAGADAVKV 297 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCC--SBHHHHHHHHHHHHHCTT---SEEEEE----EECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhhcccceEEecccCC--cchhHHHHHHHHHHHCCC---ceEEEe----eeCcHHHHHHHHHcCCCEEEE
Confidence 4667888899999988843333 456788999999999975 445441 112345678899999999986
No 402
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=67.12 E-value=31 Score=35.86 Aligned_cols=131 Identities=12% Similarity=0.056 Sum_probs=80.8
Q ss_pred HhcCCCCEEEEEec--------CCH--HHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC---eEEEcccCC--CCCCHHH
Q 006969 172 VKYAKRPRIHTFIA--------TSG--IHMEHKLRKTKQQVVEIARSMVKFARSL-GCD---DVEFSPEDA--GRSDRKF 235 (623)
Q Consensus 172 l~~a~~~~v~i~~~--------~Sd--~h~~~~l~~t~ee~l~~~~~~v~~ak~~-G~~---~V~f~~eda--~r~d~e~ 235 (623)
.+.+|.+.|.|-.+ .|+ .++...+|-|.+.-.+.+.+.|+.+|+. |-+ .|.+++.|. ...+.+.
T Consensus 152 a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~ 231 (343)
T 3kru_A 152 ANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDM 231 (343)
T ss_dssp HHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHH
T ss_pred ccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHH
Confidence 45579998887643 122 2333456667888888888899888876 322 256677532 2356788
Q ss_pred HHHHHHHHHHcCCcEEeecC--cccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-CCE
Q 006969 236 LYEILGEVIKVGATTLNIPD--TVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQ 309 (623)
Q Consensus 236 l~~~~~~~~~aGa~~I~l~D--TvG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aG-A~~ 309 (623)
..++++.+.++ ++.|.+.. +... ..|....++++.+++.++ +||..=.-- .-...+..+++.| ||.
T Consensus 232 ~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~----iPVi~~Ggi---~t~e~Ae~~l~~G~aD~ 303 (343)
T 3kru_A 232 MVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCN----IKTSAVGLI---TTQELAEEILSNERADL 303 (343)
T ss_dssp HHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT----CEEEEESSC---CCHHHHHHHHHTTSCSE
T ss_pred HHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcC----cccceeeee---eHHHHHHHHHhchhhHH
Confidence 89999999999 99998841 1110 123234466777887763 344432210 0134566778887 776
Q ss_pred E
Q 006969 310 V 310 (623)
Q Consensus 310 V 310 (623)
|
T Consensus 304 V 304 (343)
T 3kru_A 304 V 304 (343)
T ss_dssp E
T ss_pred H
Confidence 5
No 403
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=66.95 E-value=1.1e+02 Score=32.18 Aligned_cols=165 Identities=13% Similarity=0.105 Sum_probs=85.0
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCC
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~ 178 (623)
+.++..+.++.+.+.|++.+-+..+...+.|.+.++.+.+.++..+. ..+=+-.+...++..+.++.+...++.
T Consensus 188 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v~~vR~~~g~~~~------l~vDaN~~~~~~~A~~~~~~l~~~~l~ 261 (412)
T 4h1z_A 188 TRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEMEILRERLGPAVR------IACDMHWAHTASEAVALIKAMEPHGLW 261 (412)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHHCSSSE------EEEECCSCCCHHHHHHHHHHHGGGCEE
T ss_pred cHHHHHHHHHHHHhcCcceeccccccchhhHHHHHHHHHhccCCeEE------EEeccccCCCHHHHHHHHHhhcccccc
Confidence 57788888999999999999998665555677778888777654311 122222333344433344555544433
Q ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCccc
Q 006969 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG 258 (623)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG 258 (623)
.+-=.++..+ ++ ...+..+..++. |. . |.+-.++..+.+ +++.|+-.+..+|. +
T Consensus 262 ~iEqP~~~~d--------------~~---~~~~l~~~~~iP-Ia--~-dE~~~~~~~~~~----~i~~~a~div~~d~-~ 315 (412)
T 4h1z_A 262 FAEAPVRTED--------------ID---GLARVAASVSTA-IA--V-GEEWRTVHDMVP----RVARRALAIVQPEM-G 315 (412)
T ss_dssp EEECCSCTTC--------------HH---HHHHHHHHCSSE-EE--E-CTTCCSHHHHHH----HHHTTCCSEECCCH-H
T ss_pred eecCCCCccc--------------hH---HHHHHHhhcCCc-cc--c-CCcccchHhHHH----HHHcCCCCEEEecC-C
Confidence 3221122221 11 222333444443 33 2 444555554443 33455444444563 2
Q ss_pred ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH
Q 006969 259 ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 300 (623)
Q Consensus 259 ~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl 300 (623)
..=..+..++..... .. ++++..||-...|.++|.++
T Consensus 316 ~GGit~~~kia~~A~-~~----gi~v~~h~~~~~~i~~aa~l 352 (412)
T 4h1z_A 316 HKGITQFMRIGAYAH-VH----HIKVIPHATIGAGIFLAASL 352 (412)
T ss_dssp HHHHHHHHHHHHHHH-HT----TCEECCCCCSSCSHHHHHHH
T ss_pred CCChHHHHHHHHHHH-HC----CCcEEecCCcchHHHHHHHH
Confidence 222233444444333 33 25677776666666665544
No 404
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=66.88 E-value=8.1 Score=40.65 Aligned_cols=97 Identities=16% Similarity=0.173 Sum_probs=63.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeeccc-chhhHHHHHHHHhcC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWEAVKYA 175 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~eal~~a 175 (623)
.++.++-+++++.|.+.|++.||-.+| +.+++..+++.+... +| |++=.+. ..++++..++ ..
T Consensus 218 ~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------iP-I~~dE~~~~~~~~~~~i~---~~ 281 (388)
T 2nql_A 218 NQTPERALELIAEMQPFDPWFAEAPVW---TEDIAGLEKVSKNTD---------VP-IAVGEEWRTHWDMRARIE---RC 281 (388)
T ss_dssp CSCHHHHHHHHHHHGGGCCSCEECCSC---TTCHHHHHHHHTSCC---------SC-EEECTTCCSHHHHHHHHT---TS
T ss_pred CCCHHHHHHHHHHHhhcCCCEEECCCC---hhhHHHHHHHHhhCC---------CC-EEEeCCcCCHHHHHHHHH---cC
Confidence 468899999999999999999997554 456778888776431 23 3332222 3455555443 23
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~ 224 (623)
..+.|.+ +..+ --+..+.+++++|+++|+. +..+
T Consensus 282 ~~d~v~i-------------k~~~-GGit~~~~i~~~A~~~g~~-~~~h 315 (388)
T 2nql_A 282 RIAIVQP-------------EMGH-KGITNFIRIGALAAEHGID-VIPH 315 (388)
T ss_dssp CCSEECC-------------CHHH-HCHHHHHHHHHHHHHHTCE-ECCC
T ss_pred CCCEEEe-------------cCCC-CCHHHHHHHHHHHHHcCCe-EEee
Confidence 4555432 2223 4467778899999999985 4443
No 405
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=66.65 E-value=1.5e+02 Score=32.11 Aligned_cols=141 Identities=8% Similarity=-0.012 Sum_probs=81.2
Q ss_pred hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc--cc-CCCCC-CHHHHH
Q 006969 162 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS--PE-DAGRS-DRKFLY 237 (623)
Q Consensus 162 ~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~--~e-da~r~-d~e~l~ 237 (623)
.+|.-+.++.|..+|++.|-+..+.+=....+-++-+..|.++.+.+. . .+.....+. +. -+.+. ..+-..
T Consensus 29 ~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~---~--~~~~l~~l~R~~N~~G~~~~~ddv~~ 103 (464)
T 2nx9_A 29 IDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQA---M--PNTPLQMLLRGQNLLGYRHYADDVVD 103 (464)
T ss_dssp GGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHH---C--SSSCEEEEECGGGTTSSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHh---C--CCCeEEEEeccccccCcccccchhhH
Confidence 344333345667789999988665431111122355555555544431 1 123322232 21 12222 334456
Q ss_pred HHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeec----CCcchHHHHHHHHHHhCCCEEEe
Q 006969 238 EILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQ----NDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 238 ~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~H----ND~GlAvANslaAv~aGA~~Vd~ 312 (623)
..++.+.++|++.|.+.|..--. ..+.+.|+.+++.-. .+...+|+= .|....+.-+.++.++||+.|-.
T Consensus 104 ~~v~~a~~~Gvd~i~if~~~sd~--~ni~~~i~~ak~~G~---~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l 177 (464)
T 2nx9_A 104 TFVERAVKNGMDVFRVFDAMNDV--RNMQQALQAVKKMGA---HAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIAL 177 (464)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCT--HHHHHHHHHHHHTTC---EEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCCcCEEEEEEecCHH--HHHHHHHHHHHHCCC---EEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 77889999999999998865433 678888898887521 233344431 14555666777888999997643
No 406
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=66.50 E-value=1.2e+02 Score=31.03 Aligned_cols=196 Identities=16% Similarity=0.073 Sum_probs=116.1
Q ss_pred cccCCCCC--CCCCHHHHHHHHHHHhHcCCCEEEEecCCCC----hhHHHHHHHHHHHhccccccCCCccceEEeeccc-
Q 006969 88 RDGEQSPG--ATLTSKEKLDIARQLAKLGVDIIEAGFPAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC- 160 (623)
Q Consensus 88 RDG~Q~~g--~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~- 160 (623)
+.+.+.-+ ...+.+.-..+++.-.+++-+.|=--+|... ..-...++.+++.. -+|+..=+=-+
T Consensus 23 ~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~---------~VPVaLHlDHg~ 93 (306)
T 3pm6_A 23 RTHSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAA---------SVPITLHLDHAQ 93 (306)
T ss_dssp HHTTCCEEEEECSSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHC---------SSCEEEEEEEEC
T ss_pred HHCCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccHHHHHHHHHHHHHC---------CCCEEEEcCCCC
Confidence 44555543 2468899999999999999997744343211 11123444444431 13444333333
Q ss_pred chhhHHHHHHHH----hcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------cccC---
Q 006969 161 NERDIKTAWEAV----KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPED--- 227 (623)
Q Consensus 161 ~~~dI~~a~eal----~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f------~~ed--- 227 (623)
..+.+.+++++. ...|...|-+ . .| ..+.|||++..++.+++|+..|+. |+- +-||
T Consensus 94 ~~e~i~~ai~~~~~~~~~~GFtSVMi-D-gS--------~~p~eENi~~Tk~vv~~ah~~gvs-VEaElG~igG~Edgv~ 162 (306)
T 3pm6_A 94 DPEIIKRAADLSRSETHEPGFDSIMV-D-MS--------HFSKEENLRLTRELVAYCNARGIA-TEAEPGRIEGGEDGVQ 162 (306)
T ss_dssp CHHHHHHHHHTC------CCCSEEEE-C-CT--------TSCHHHHHHHHHHHHHHHHTTTCE-EEECSSBCCCCBTTBC
T ss_pred CHHHHHHHHHhhhhccCCCCCCEEEE-e-CC--------CCCHHHHHHHHHHHHHHHHHcCCe-EEEEeeeeccccCCcc
Confidence 344555555420 0016666543 2 22 246899999999999999999974 653 2232
Q ss_pred ------CCCCCHHHHHHHHHHHHHcCCcEEeec--CcccccC---HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH
Q 006969 228 ------AGRSDRKFLYEILGEVIKVGATTLNIP--DTVGITM---PTEFGKLIADIKANTPGIENVVISTHCQNDLGLST 296 (623)
Q Consensus 228 ------a~r~d~e~l~~~~~~~~~aGa~~I~l~--DTvG~~~---P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv 296 (623)
...|+|+...+++ +.|+|.+-++ -.=|... |.-=.++++.+++.++. ++||-+|. -.|...
T Consensus 163 ~~~~~~~~yT~Peea~~Fv----~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~--~vpLVlHG--gSG~p~ 234 (306)
T 3pm6_A 163 DTVDLEGVLTTPEESEEFV----ATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGE--RVGLVLHG--ADPFTK 234 (306)
T ss_dssp CCTTCCCBCCCHHHHHHHH----TTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTT--TSEEEECS--CTTCCH
T ss_pred ccccccccCCCHHHHHHHH----HcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCC--CCCEEeeC--CCCCCH
Confidence 2368999988876 3798855443 1112222 22223566677776631 36788765 456777
Q ss_pred HHHHHHHHhCCCEEE
Q 006969 297 ANTIAGACAGARQVE 311 (623)
Q Consensus 297 ANslaAv~aGA~~Vd 311 (623)
..-..|+..|+.-|+
T Consensus 235 e~i~~ai~~GV~KiN 249 (306)
T 3pm6_A 235 EIFEKCIERGVAKVN 249 (306)
T ss_dssp HHHHHHHHTTEEEEE
T ss_pred HHHHHHHHcCCeEEE
Confidence 778888888877663
No 407
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=66.26 E-value=23 Score=35.58 Aligned_cols=97 Identities=11% Similarity=-0.013 Sum_probs=64.8
Q ss_pred cCCCCEEEEEecCCHHHHHHHh------CCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcC
Q 006969 174 YAKRPRIHTFIATSGIHMEHKL------RKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 247 (623)
Q Consensus 174 ~a~~~~v~i~~~~Sd~h~~~~l------~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aG 247 (623)
.+|++.|-+ ..|- -+ ..+ ..|.+|++..+....+-++ ...|..+.+.++..+++...+.+.++.++|
T Consensus 35 ~aG~d~ilv--Gdsl-~~-~~lG~~dt~~vtldemi~h~~aV~r~~~---~~~vvaD~pfgsy~~~~~a~~~a~rl~kaG 107 (264)
T 1m3u_A 35 DEGLNVMLV--GDSL-GM-TVQGHDSTLPVTVADIAYHTAAVRRGAP---NCLLLADLPFMAYATPEQAFENAATVMRAG 107 (264)
T ss_dssp HHTCCEEEE--CTTH-HH-HTTCCSSSTTCCHHHHHHHHHHHHHHCT---TSEEEEECCTTSSSSHHHHHHHHHHHHHTT
T ss_pred HcCCCEEEE--CHHH-HH-HHcCCCCCCCcCHHHHHHHHHHHHhhCC---CCcEEEECCCCCcCCHHHHHHHHHHHHHcC
Confidence 358888754 3332 22 233 4578888776665544432 223556666655559999999999999999
Q ss_pred CcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEee
Q 006969 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHC 288 (623)
Q Consensus 248 a~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~ 288 (623)
|+.|.|-|. .++.+.|+.+.+. .+|+--|.
T Consensus 108 a~aVklEgg------~e~~~~I~al~~a-----gipV~gHi 137 (264)
T 1m3u_A 108 ANMVKIEGG------EWLVETVQMLTER-----AVPVCGHL 137 (264)
T ss_dssp CSEEECCCS------GGGHHHHHHHHHT-----TCCEEEEE
T ss_pred CCEEEECCc------HHHHHHHHHHHHC-----CCCeEeee
Confidence 999999997 3677888888764 24565554
No 408
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=66.26 E-value=23 Score=36.46 Aligned_cols=86 Identities=17% Similarity=0.148 Sum_probs=51.3
Q ss_pred HHHHHHHHHHcCCcEEeecCcccc-cCHHHHHHHH----HHHHHhCCCC---cceeEEEeecCCcchHHHHHHHHHHhCC
Q 006969 236 LYEILGEVIKVGATTLNIPDTVGI-TMPTEFGKLI----ADIKANTPGI---ENVVISTHCQNDLGLSTANTIAGACAGA 307 (623)
Q Consensus 236 l~~~~~~~~~aGa~~I~l~DTvG~-~~P~~v~~li----~~l~~~~~~~---~~v~i~~H~HND~GlAvANslaAv~aGA 307 (623)
+.+.+++.+++|++.|.+.|+.+. +.|..+.+++ +.+.+.+... .++++-.||.+. +.-+ . .-.+.|+
T Consensus 189 ~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~ii~~~~g~-~~~l-~--~l~~~g~ 264 (354)
T 3cyv_A 189 VTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGG-GQWL-E--AMAETGC 264 (354)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHSCSEETTEECCEEEECTTT-TTTH-H--HHHTTSC
T ss_pred HHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEECCCH-HHHH-H--HHHhcCC
Confidence 344556677899999999987654 5677776654 3344445321 036677777665 2111 1 2226799
Q ss_pred CEEEeccCCccCccCcccHHHHHHHH
Q 006969 308 RQVEVTINGIGERAGNASLEEVVMAF 333 (623)
Q Consensus 308 ~~Vd~Tv~GlGERaGNa~lEevv~~L 333 (623)
+.+..- . ..+++++...+
T Consensus 265 d~i~~d-----~---~~dl~~~~~~~ 282 (354)
T 3cyv_A 265 DALGLD-----W---TTDIADARRRV 282 (354)
T ss_dssp SEEECC-----T---TSCHHHHHHHH
T ss_pred CEEEeC-----C---CCCHHHHHHHh
Confidence 988742 1 26787765544
No 409
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=66.25 E-value=20 Score=37.42 Aligned_cols=103 Identities=12% Similarity=0.061 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
+..++.++-+++++.|.++|+ .||-.+| +++..+++.+...- |.+.+=.-...++++..++.
T Consensus 197 n~~~~~~~a~~~~~~l~~~~i-~iE~P~~-----~~~~~~~l~~~~~i---------PI~~de~i~~~~~~~~~i~~--- 258 (379)
T 2rdx_A 197 NQGWRVDNAIRLARATRDLDY-ILEQPCR-----SYEECQQVRRVADQ---------PMKLDECVTGLHMAQRIVAD--- 258 (379)
T ss_dssp TTCSCHHHHHHHHHHTTTSCC-EEECCSS-----SHHHHHHHHTTCCS---------CEEECTTCCSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhCCe-EEeCCcC-----CHHHHHHHHhhCCC---------CEEEeCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~ 229 (623)
..++.|.+ +..+---+..+.+.++.|+++|+. +..+....+
T Consensus 259 ~~~d~v~i-------------k~~~~GGit~~~~i~~~A~~~g~~-~~~~~~~es 299 (379)
T 2rdx_A 259 RGAEICCL-------------KISNLGGLSKARRTRDFLIDNRMP-VVAEDSWGG 299 (379)
T ss_dssp TCCSEEEE-------------ETTTTTSHHHHHHHHHHHHHTTCC-EEEECSBCS
T ss_pred CCCCEEEE-------------eccccCCHHHHHHHHHHHHHcCCe-EEEeeccCc
No 410
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=66.17 E-value=79 Score=32.08 Aligned_cols=178 Identities=12% Similarity=0.141 Sum_probs=90.4
Q ss_pred CHHHHHHHHHHHhHc----CCCEEE-Eec---CCCChhHH------HHHHHHHHHhccccccCCCccceEEeecccchhh
Q 006969 99 TSKEKLDIARQLAKL----GVDIIE-AGF---PAASKEDF------EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD 164 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~----Gvd~IE-vGf---P~~s~~d~------e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~d 164 (623)
+.++-+++|+.|.++ |+..|= .+| |+.++..| +-++.+.+..... |+ +.++- -....+
T Consensus 29 ~~~~~~e~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~-----Gl-p~~te--v~d~~~ 100 (288)
T 3tml_A 29 SEQMTIDTAGRLKEICEKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQL-----GL-PVLTD--VHSIDE 100 (288)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECBC--------------CHHHHHHHHHHHHHHH-----CC-CEEEE--CCSGGG
T ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc-----CC-eEEEE--eCCHHH
Confidence 789999999999876 887552 233 66666433 2333333322110 22 22221 124455
Q ss_pred HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHH
Q 006969 165 IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVI 244 (623)
Q Consensus 165 I~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~ 244 (623)
++...+. ++.+.| +..+. +. .+ .++++-+.|+. |.++--. -.+++.+...++.+.
T Consensus 101 v~~l~~~-----vd~lkI--gA~~~--------~n---~~----LLr~~a~~gkP-VilK~G~--~~t~~e~~~ave~i~ 155 (288)
T 3tml_A 101 IEQVASV-----VDVLQT--PAFLC--------RQ---TD----FIHACARSGKP-VNIKKGQ--FLAPHDMKNVIDKAR 155 (288)
T ss_dssp HHHHHHH-----CSEEEE--CGGGT--------TC---HH----HHHHHHTSSSC-EEEECCT--TCCTTHHHHHHHHHH
T ss_pred HHHHHHh-----CCEEEE--Ccccc--------cC---HH----HHHHHHccCCc-EEEeCCC--CCCHHHHHHHHHHHH
Confidence 6554332 455554 33221 11 11 34455567875 7774321 134445556666666
Q ss_pred HcCC------cEEeecCcccccCHH----HHHHHHHHHHHhCCCCcceeEEE-eecC-------------CcchHHHHHH
Q 006969 245 KVGA------TTLNIPDTVGITMPT----EFGKLIADIKANTPGIENVVIST-HCQN-------------DLGLSTANTI 300 (623)
Q Consensus 245 ~aGa------~~I~l~DTvG~~~P~----~v~~li~~l~~~~~~~~~v~i~~-H~HN-------------D~GlAvANsl 300 (623)
+.|. +.|.||.-.=...++ .+.. |..+++ + + +||.+ +.|- ++.+-..-++
T Consensus 156 ~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~~-i~~lk~-~-~---~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~ 229 (288)
T 3tml_A 156 DAAREAGLSEDRFMACERGVSFGYNNLVSDMRS-LAIMRE-T-N---APVVFDATHSVQLPGGQGTSSGGQREFVPVLAR 229 (288)
T ss_dssp HHHHTTTCCSCCEEEEECCEECSSSCEECCHHH-HHHGGG-G-S---SCEEEEHHHHTCCCC--------CTTHHHHHHH
T ss_pred HcCCCccCCCCcEEEEeCCCCCCCCcCcCCHHH-HHHHHh-c-C---CcEEEcCCcccccCCcccCCCCCchhhHHHHHH
Confidence 6775 667777532211122 2332 444665 4 2 56877 6774 2233367789
Q ss_pred HHHHhCCC--EEEeccC
Q 006969 301 AGACAGAR--QVEVTIN 315 (623)
Q Consensus 301 aAv~aGA~--~Vd~Tv~ 315 (623)
+|+.+||+ .|+.=..
T Consensus 230 AAvA~GadGl~iE~H~~ 246 (288)
T 3tml_A 230 AAVATGVAGLFMETHPN 246 (288)
T ss_dssp HHHHHCCSEEEEEEESS
T ss_pred HHHHcCCCEEEEeeccC
Confidence 99999999 7765443
No 411
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=66.14 E-value=15 Score=37.77 Aligned_cols=83 Identities=18% Similarity=0.213 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHcCCcEEeecCcccc-cCHHHHHHH--------HHHHHHhCCCCcceeEEEeecCCcchHHHHHHHH-H
Q 006969 234 KFLYEILGEVIKVGATTLNIPDTVGI-TMPTEFGKL--------IADIKANTPGIENVVISTHCQNDLGLSTANTIAG-A 303 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l~DTvG~-~~P~~v~~l--------i~~l~~~~~~~~~v~i~~H~HND~GlAvANslaA-v 303 (623)
+.+.+.+++.+++|++.|.+.|+.|. +.|..+.++ ++.+++. ++ +++-.||.++ .+-+.. .
T Consensus 179 ~~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g---~~~i~~~~g~-----~~~l~~l~ 249 (338)
T 2eja_A 179 ETVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDF-SD---TPVIYFFRGS-----SSFIDLAV 249 (338)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CC---CCEEEEESSH-----HHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhc-CC---CCEEEEcCCc-----HHHHHHHH
Confidence 34556667778899999999997655 678776654 4555554 43 5688888544 233333 3
Q ss_pred HhCCCEEEeccCCccCccCcccHHHHHHHH
Q 006969 304 CAGARQVEVTINGIGERAGNASLEEVVMAF 333 (623)
Q Consensus 304 ~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L 333 (623)
+.|++.+..-. ..+++++...+
T Consensus 250 ~~g~d~~~~d~--------~~dl~~~~~~~ 271 (338)
T 2eja_A 250 DYRADALSVDW--------SVDIPELFKIY 271 (338)
T ss_dssp TSCCSEEECCT--------TSCHHHHHHHC
T ss_pred HcCCCEEEeCC--------CCCHHHHHHhC
Confidence 56888775422 26787766554
No 412
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=66.02 E-value=42 Score=32.90 Aligned_cols=200 Identities=12% Similarity=0.045 Sum_probs=105.8
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcC
Q 006969 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 175 (623)
..|-.+-...|-+.+.+.|++.+-.-.......+.+.++.+... .++ | |..+. ....+ +..++.+..
T Consensus 27 ~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~---~vd---g----iI~~~-~~~~~-~~~~~~l~~- 93 (303)
T 3kke_A 27 NAVFADMFSGVQMAASGHSTDVLLGQIDAPPRGTQQLSRLVSEG---RVD---G----VLLQR-REDFD-DDMLAAVLE- 93 (303)
T ss_dssp STTHHHHHHHHHHHHHHTTCCEEEEECCSTTHHHHHHHHHHHSC---SSS---E----EEECC-CTTCC-HHHHHHHHT-
T ss_pred ChHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhC---CCc---E----EEEec-CCCCc-HHHHHHHhC-
Confidence 34667777888889999999887553332223334455554432 111 1 11111 11111 113455566
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE-cccCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGATTLNIP 254 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f-~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~ 254 (623)
++|.|.+-....+ .......+ +.+....+++++.++|...+.| +.........+.+.-+.+++.+.|...-...
T Consensus 94 ~iPvV~i~~~~~~--~~~~V~~D---~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~ 168 (303)
T 3kke_A 94 GVPAVTINSRVPG--RVGSVILD---DQKGGGIATEHLITLGHSRIAFISGTAIHDTAQRRKEGYLETLASAGLRSEAAW 168 (303)
T ss_dssp TSCEEEESCCCTT--CCCEEEEC---HHHHHHHHHHHHHHTTCCSEEEEESCSSCHHHHHHHHHHHHHHHHTTCCCCGGG
T ss_pred CCCEEEECCcCCC--CCCEEEEC---cHHHHHHHHHHHHHCCCCeEEEEeCCCcCccHHHHHHHHHHHHHHcCCCCCcce
Confidence 8888765433221 00112223 3455667888888899876655 2222223344666667777888886421000
Q ss_pred CcccccCHHHHHHHHHHH-----HHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE-EEeccCCcc
Q 006969 255 DTVGITMPTEFGKLIADI-----KANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ-VEVTINGIG 318 (623)
Q Consensus 255 DTvG~~~P~~v~~li~~l-----~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~-Vd~Tv~GlG 318 (623)
-..|-..++..++.+..+ .+..|..+ .+=|.||. +|+.-..+.-+.|.+. =|.+|.|++
T Consensus 169 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~----ai~~~nd~-~A~g~~~al~~~G~~vP~di~vig~D 233 (303)
T 3kke_A 169 VVDAGWEADAGSAALNTLYRGANLGKPDGPT----AVVVASVN-AAVGALSTALRLGLRVPEDLSIVGIN 233 (303)
T ss_dssp EEECCSSHHHHHHHHHHHHHHHCTTSTTSCS----EEEESSHH-HHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred EEecCCChHHHHHHHHHhcchhhhcCCCCCc----EEEECCHH-HHHHHHHHHHHcCCCCCCceEEEEEc
Confidence 012345667777777766 44444332 45577764 4444444555778652 256777765
No 413
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=65.98 E-value=95 Score=29.67 Aligned_cols=102 Identities=8% Similarity=0.060 Sum_probs=59.8
Q ss_pred hHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCC-----HHHHHH
Q 006969 164 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSD-----RKFLYE 238 (623)
Q Consensus 164 dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d-----~e~l~~ 238 (623)
+++...+.+...|+....+-.+.. ++...++.++.+.+.++.|+.+|.+.|.+.+....... .+.+.+
T Consensus 52 ~~~~~~~~~~~~gl~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~l~~ 124 (272)
T 2q02_A 52 NYNQVRNLAEKYGLEIVTINAVYP-------FNQLTEEVVKKTEGLLRDAQGVGARALVLCPLNDGTIVPPEVTVEAIKR 124 (272)
T ss_dssp CHHHHHHHHHHTTCEEEEEEEETT-------TTSCCHHHHHHHHHHHHHHHHHTCSEEEECCCCSSBCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCeEEechhhhc-------cCCcHHHHHHHHHHHHHHHHHhCCCEEEEccCCCchhHHHHHHHHHHHH
Confidence 444444556667776544422211 12223556788899999999999987776543211112 455666
Q ss_pred HHHHHHHcCCcEEeec-C---cccccCHHHHHHHHHHHH
Q 006969 239 ILGEVIKVGATTLNIP-D---TVGITMPTEFGKLIADIK 273 (623)
Q Consensus 239 ~~~~~~~aGa~~I~l~-D---TvG~~~P~~v~~li~~l~ 273 (623)
+++.+.+.|+. |.|- . +.-..++.++.++++.+.
T Consensus 125 l~~~a~~~gv~-l~~E~~~~~~~~~~~~~~~~~l~~~v~ 162 (272)
T 2q02_A 125 LSDLFARYDIQ-GLVEPLGFRVSSLRSAVWAQQLIREAG 162 (272)
T ss_dssp HHHHHHTTTCE-EEECCCCSTTCSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHcCCE-EEEEecCCCcccccCHHHHHHHHHHhC
Confidence 66777777875 3332 1 123457888888877764
No 414
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=65.93 E-value=32 Score=35.60 Aligned_cols=81 Identities=11% Similarity=0.131 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHcCCcEEeec-------------------CcccccCH---HHHHHHHHHHHHhCCCCcceeEEEeecCC-
Q 006969 235 FLYEILGEVIKVGATTLNIP-------------------DTVGITMP---TEFGKLIADIKANTPGIENVVISTHCQND- 291 (623)
Q Consensus 235 ~l~~~~~~~~~aGa~~I~l~-------------------DTvG~~~P---~~v~~li~~l~~~~~~~~~v~i~~H~HND- 291 (623)
.+.+.++.+.++|.|.|-|= |-.|...- .-+.++|+.+|+.++. +.+|++-..-+
T Consensus 153 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~--d~pV~vRls~~~ 230 (349)
T 3hgj_A 153 AFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPR--ELPLFVRVSATD 230 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCT--TSCEEEEEESCC
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcC--CceEEEEecccc
Confidence 34455566778898877663 44454332 3357889999999864 34555544321
Q ss_pred ---cch----HHHHHHHHHHhCCCEEEeccCCc
Q 006969 292 ---LGL----STANTIAGACAGARQVEVTINGI 317 (623)
Q Consensus 292 ---~Gl----AvANslaAv~aGA~~Vd~Tv~Gl 317 (623)
-|. .+.-+....++|++.|+.+..+.
T Consensus 231 ~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~ 263 (349)
T 3hgj_A 231 WGEGGWSLEDTLAFARRLKELGVDLLDCSSGGV 263 (349)
T ss_dssp CSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCc
Confidence 132 22333444567999999987544
No 415
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=65.86 E-value=28 Score=36.02 Aligned_cols=119 Identities=13% Similarity=0.208 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhH--cCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHH
Q 006969 95 GATLTSKEKLDIARQLAK--LGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAV 172 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~--~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal 172 (623)
+..++.++-+++++.|.+ +|++.||=.+| +.|++..+++.+...- |.+.+=.-....++...++.
T Consensus 193 n~~~~~~~a~~~~~~l~~~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------pIa~dE~~~~~~~~~~~i~~- 259 (366)
T 1tkk_A 193 NQGWRPKEAVTAIRKMEDAGLGIELVEQPVH---KDDLAGLKKVTDATDT---------PIMADESVFTPRQAFEVLQT- 259 (366)
T ss_dssp TTCSCHHHHHHHHHHHHHTTCCEEEEECCSC---TTCHHHHHHHHHHCSS---------CEEECTTCCSHHHHHHHHHH-
T ss_pred CCCCCHHHHHHHHHHHhhcCCCceEEECCCC---cccHHHHHHHHhhCCC---------CEEEcCCCCCHHHHHHHHHh-
Q ss_pred hcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHH
Q 006969 173 KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGE 242 (623)
Q Consensus 173 ~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~ 242 (623)
...+.|.+ +..+---+..+.++++.|+++|+. +..+....+.......+.++..
T Consensus 260 --~~~d~v~i-------------k~~~~GGit~~~~i~~~A~~~g~~-~~~~~~~es~i~~~a~~~laaa 313 (366)
T 1tkk_A 260 --RSADLINI-------------KLMKAGGISGAEKINAMAEACGVE-CMVGSMIETKLGITAAAHFAAS 313 (366)
T ss_dssp --TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHHTCC-EEECCSSCCHHHHHHHHHHHHH
T ss_pred --CCCCEEEe-------------ehhhhcCHHHHHHHHHHHHHcCCc-EEecCccccHHHHHHHHHHHHc
No 416
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=65.83 E-value=53 Score=32.17 Aligned_cols=136 Identities=15% Similarity=0.140 Sum_probs=85.5
Q ss_pred CcccCCCCCCCCCHHHHHHHH---HHHhHcCCCEEEEecCCC-ChhHHHHHHHHHHHhccccccCCCccceEEeecccc-
Q 006969 87 LRDGEQSPGATLTSKEKLDIA---RQLAKLGVDIIEAGFPAA-SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN- 161 (623)
Q Consensus 87 LRDG~Q~~g~~~t~e~Kl~Ia---~~L~~~Gvd~IEvGfP~~-s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~- 161 (623)
+|-| ++.++.+|...+. +.+.++|+|-|-+|+-.. ..-|.+.++++.+..+. + + +.|-|+-
T Consensus 63 PR~G----dF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~-------~-~--vTFHRAFD 128 (224)
T 2bdq_A 63 PRGG----NFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQG-------L-P--LVFHMAFD 128 (224)
T ss_dssp SSSS----CSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTT-------C-C--EEECGGGG
T ss_pred CCCC----CCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCC-------C-e--EEEECchh
Confidence 5655 4667876665554 467889999999998633 33478899988876432 1 1 2355543
Q ss_pred ---hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHH
Q 006969 162 ---ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYE 238 (623)
Q Consensus 162 ---~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~ 238 (623)
..|-..+++.|.+.|+++|-...... +.+.++.++.+++.++++... +++-| ++-..++.+.+
T Consensus 129 ~~~~~d~~~ale~L~~lGv~rILTSG~~~--------~~~a~~g~~~L~~Lv~~a~~r----i~Im~--GgGV~~~Ni~~ 194 (224)
T 2bdq_A 129 VIPKSDQKKSIDQLVALGFTRILLHGSSN--------GEPIIENIKHIKALVEYANNR----IEIMV--GGGVTAENYQY 194 (224)
T ss_dssp GSCTTTHHHHHHHHHHTTCCEEEECSCSS--------CCCGGGGHHHHHHHHHHHTTS----SEEEE--CSSCCTTTHHH
T ss_pred ccCCcCHHHHHHHHHHcCCCEEECCCCCC--------CCcHHHHHHHHHHHHHhhCCC----eEEEe--CCCCCHHHHHH
Confidence 26778889999999999986543221 123677888888998875432 33333 22333344444
Q ss_pred HHHHHHHcCCcEEee
Q 006969 239 ILGEVIKVGATTLNI 253 (623)
Q Consensus 239 ~~~~~~~aGa~~I~l 253 (623)
+++ +.|++.+=.
T Consensus 195 l~~---~tGv~e~H~ 206 (224)
T 2bdq_A 195 ICQ---ETGVKQAHG 206 (224)
T ss_dssp HHH---HHTCCEEEE
T ss_pred HHH---hhCCCEEcc
Confidence 433 458888775
No 417
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=65.69 E-value=28 Score=34.17 Aligned_cols=112 Identities=10% Similarity=-0.003 Sum_probs=65.9
Q ss_pred hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc-------c-CCCCCC-
Q 006969 162 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-------E-DAGRSD- 232 (623)
Q Consensus 162 ~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~-------e-da~r~d- 232 (623)
..+++..++.++..|.+.|.+...... ... +.+..+.+++.|++.+.+.+ . +....+
T Consensus 40 ~~~~~~~l~~~~~~G~~~vEl~~~~~~-------~~~-------~~~~~~~l~~~gl~~~~~~~~~p~~~~~~~l~~~d~ 105 (290)
T 2zvr_A 40 KGDLRKGMELAKRVGYQAVEIAVRDPS-------IVD-------WNEVKILSEELNLPICAIGTGQAYLADGLSLTHPND 105 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECSCGG-------GSC-------HHHHHHHHHHHTCCEEEEECTHHHHTTCCCTTCSSH
T ss_pred ccCHHHHHHHHHHhCCCEEEEcCCCcc-------hhh-------HHHHHHHHHHcCCeEEEEeccCccccCCCCCCCCCH
Confidence 346666677777779999988764211 111 23455677788987435544 1 122223
Q ss_pred ------HHHHHHHHHHHHHcCCcEEeecCcccc----cCHHHHHHHHHHHH---HhCCCCcceeEEEeecCC
Q 006969 233 ------RKFLYEILGEVIKVGATTLNIPDTVGI----TMPTEFGKLIADIK---ANTPGIENVVISTHCQND 291 (623)
Q Consensus 233 ------~e~l~~~~~~~~~aGa~~I~l~DTvG~----~~P~~v~~li~~l~---~~~~~~~~v~i~~H~HND 291 (623)
.+++.+.++.+.+.|+..|..+ ..|. .....+..+++.++ +.... +.|.+|.|++
T Consensus 106 ~~r~~~~~~~~~~i~~A~~lG~~~v~~~-~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~---v~l~lEn~~~ 173 (290)
T 2zvr_A 106 EIRKKAIERVVKHTEVAGMFGALVIIGL-VRGRREGRSYEETEELFIESMKRLLELTEH---AKFVIEPLNR 173 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEEESG-GGCCCTTSCHHHHHHHHHHHHHHHHHHCSS---CCEEECCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEec-CCCCCCCcCHHHHHHHHHHHHHHHHHHhcc---CEEEEEeCCC
Confidence 3678888888899999988733 1233 12333444444444 33322 6789888874
No 418
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=65.67 E-value=72 Score=31.40 Aligned_cols=115 Identities=8% Similarity=-0.045 Sum_probs=68.3
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc-cCCCCC------CHHH
Q 006969 163 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-EDAGRS------DRKF 235 (623)
Q Consensus 163 ~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~-eda~r~------d~e~ 235 (623)
.+++..++.++.+|.+.|.++.. +..-......+ +.+..+.+++.|++.+.+++ .+.... ..++
T Consensus 36 ~~~~~~l~~a~~~G~~~vEl~~~--~~~~~~~~~~~-------~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~ 106 (296)
T 2g0w_A 36 VSFPKRVKVAAENGFDGIGLRAE--NYVDALAAGLT-------DEDMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKK 106 (296)
T ss_dssp SCHHHHHHHHHHTTCSEEEEEHH--HHHHHHHTTCC-------HHHHHHHHHHTTCEEEEEECBCCCSSTTTCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEeCHH--HHHHHHhcCCc-------HHHHHHHHHHcCCceEeehhhhccccCChHHHHHHHH
Confidence 46777778888889999998753 11100001222 33455677889986333333 111011 1357
Q ss_pred HHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecC
Q 006969 236 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQN 290 (623)
Q Consensus 236 l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HN 290 (623)
+.+.++.+.+.|+..|.+.-. +......+.+.++.+.+... ++.|.+|.|+
T Consensus 107 ~~~~i~~A~~lGa~~v~~g~~-~~~~~~~~~~~l~~l~~~a~---Gv~l~lE~~~ 157 (296)
T 2g0w_A 107 EQTTFHMARLFGVKHINCGLL-EKIPEEQIIVALGELCDRAE---ELIIGLEFMP 157 (296)
T ss_dssp HHHHHHHHHHHTCCEEEECCC-SCCCHHHHHHHHHHHHHHHT---TSEEEEECCT
T ss_pred HHHHHHHHHHcCCCEEEEcCC-CCCCHHHHHHHHHHHHHHhc---CCEEEEEecC
Confidence 788889999999999987422 22223445555555554432 4789999986
No 419
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=65.54 E-value=19 Score=36.16 Aligned_cols=123 Identities=10% Similarity=-0.020 Sum_probs=68.4
Q ss_pred CceEEEeCCCcccCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEec-CC--CChhHHHHHHHHHHHhccccccCCCccceE
Q 006969 78 NYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF-PA--ASKEDFEAVRTIAKEVGNAVDAESGYVPVI 154 (623)
Q Consensus 78 ~~v~I~DtTLRDG~Q~~g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGf-P~--~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i 154 (623)
+++-|.=-|+||-.+. .+.++ .++.+.++|++.||+.. +. ..+.+.+.++.+.+..+-.+ ..+
T Consensus 13 ~~~g~~~~s~~~~~~~----~~~~~---~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v-------~~~ 78 (303)
T 3l23_A 13 KEIGLQIYSLSQELYK----GDVAA---NLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKI-------ISS 78 (303)
T ss_dssp CCCEEEGGGGGGGGGS----SCHHH---HHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEE-------EEE
T ss_pred CceEEEEEEchhhhcc----CCHHH---HHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeE-------EEE
Confidence 4566666788885432 35554 45566778999999964 11 12334556666655432211 111
Q ss_pred Ee-e-----c---------------ccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 006969 155 CG-L-----S---------------RCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFA 213 (623)
Q Consensus 155 ~~-~-----~---------------r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~a 213 (623)
.. + . ....+.++++++..+..|.+.|.+... ...... ...+...+.+.++.++|
T Consensus 79 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~-~~~~~~----~~~~~~~~~l~~l~~~a 153 (303)
T 3l23_A 79 HVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPMM-PTITTH----DEAKLVCDIFNQASDVI 153 (303)
T ss_dssp ECCCBCTTCSSTTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSEEEECSC-CCCCSH----HHHHHHHHHHHHHHHHH
T ss_pred ecccccccccCcccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEECCC-CCCCCH----HHHHHHHHHHHHHHHHH
Confidence 10 1 0 001234566777777789999877421 110000 01345667778888999
Q ss_pred HHcCCC
Q 006969 214 RSLGCD 219 (623)
Q Consensus 214 k~~G~~ 219 (623)
+++|+.
T Consensus 154 ~~~Gv~ 159 (303)
T 3l23_A 154 KAEGIA 159 (303)
T ss_dssp HHTTCT
T ss_pred HHCCCc
Confidence 999984
No 420
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=65.53 E-value=33 Score=36.86 Aligned_cols=54 Identities=15% Similarity=0.174 Sum_probs=38.6
Q ss_pred EEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccc------------cCHHHHHHHHHHHHHh
Q 006969 221 VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGI------------TMPTEFGKLIADIKAN 275 (623)
Q Consensus 221 V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~------------~~P~~v~~li~~l~~~ 275 (623)
|..+.+.+ .-++..+.+.++.++++||-.|+|-|.++. ...+++.+.|+..+..
T Consensus 148 IiaD~DtG-fG~~~nv~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A 213 (433)
T 3eol_A 148 IVADAEAG-FGDPLDAFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLA 213 (433)
T ss_dssp EEEECC----CCHHHHHHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHH
T ss_pred eEEECCCC-CCCcHHHHHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHH
Confidence 77888544 445557899999999999999999999862 3455666666666543
No 421
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=64.58 E-value=49 Score=31.90 Aligned_cols=201 Identities=12% Similarity=0.016 Sum_probs=102.9
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChh-HHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
..|-.+-...+-+.+.+.|++.+-. .....++ +.+.++.+... .++ | .|. +. ....+ ..++.+..
T Consensus 25 ~~~~~~~~~gi~~~a~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~---~vd---g---iIi-~~-~~~~~--~~~~~l~~ 90 (292)
T 3k4h_A 25 NPFFPEVIRGISSFAHVEGYALYMS-TGETEEEIFNGVVKMVQGR---QIG---G---IIL-LY-SREND--RIIQYLHE 90 (292)
T ss_dssp STHHHHHHHHHHHHHHHTTCEEEEC-CCCSHHHHHHHHHHHHHTT---CCC---E---EEE-SC-CBTTC--HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEE-eCCCCHHHHHHHHHHHHcC---CCC---E---EEE-eC-CCCCh--HHHHHHHH
Confidence 3456667777888899999865542 2211111 12333333321 111 1 121 11 11111 23444555
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE-cccCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGATTLNI 253 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f-~~eda~r~d~e~l~~~~~~~~~aGa~~I~l 253 (623)
.++|.|.+-....+.......+.+ +.+....+++++.++|.+.|.| +.........+.+.-+.+++.+.|......
T Consensus 91 ~~iPvV~~~~~~~~~~~~~~V~~D---~~~~g~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~ 167 (292)
T 3k4h_A 91 QNFPFVLIGKPYDRKDEITYVDND---NYTAAREVAEYLISLGHKQIAFIGGGSDLLVTRDRLAGMSDALKLADIVLPKE 167 (292)
T ss_dssp TTCCEEEESCCSSCTTTSCEEECC---HHHHHHHHHHHHHHTTCCCEEEEESCTTBHHHHHHHHHHHHHHHHTTCCCCGG
T ss_pred CCCCEEEECCCCCCCCCCCEEEEC---cHHHHHHHHHHHHHCCCceEEEEeCcccchhHHHHHHHHHHHHHHcCCCCChh
Confidence 689987664332221000112233 3455667788888889876655 322222233456666777788888642100
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE-EEeccCCcc
Q 006969 254 PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ-VEVTINGIG 318 (623)
Q Consensus 254 ~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~-Vd~Tv~GlG 318 (623)
.-..+-..+....+.+..+.+..|.++ .+-|.||. +|..-.-+.-++|.+. =|.+|.|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d~-~a~g~~~al~~~g~~vP~di~vig~d 228 (292)
T 3k4h_A 168 YILHFDFSRESGQQAVEELMGLQQPPT----AIMATDDL-IGLGVLSALSKKGFVVPKDVSIVSFN 228 (292)
T ss_dssp GEEECCSSHHHHHHHHHHHHTSSSCCS----EEEESSHH-HHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred eEEecCCCHHHHHHHHHHHHcCCCCCc----EEEEcChH-HHHHHHHHHHHhCCCCCCeEEEEEec
Confidence 001244567777888877776655432 44577763 4444444445678642 156677765
No 422
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=64.33 E-value=16 Score=37.83 Aligned_cols=98 Identities=17% Similarity=0.138 Sum_probs=63.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecc-cchhhHHHHHHHHhcC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYA 175 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~~a 175 (623)
.++.++-+++++.|.++|++.||-.+| +.|++..+++.+... +|.+ +=.+ ....+++..++. .
T Consensus 199 ~~~~~~a~~~~~~l~~~~i~~iE~P~~---~~~~~~~~~l~~~~~---------iPI~-~de~~~~~~~~~~~i~~---~ 262 (359)
T 1mdl_A 199 SLDVPAAIKRSQALQQEGVTWIEEPTL---QHDYEGHQRIQSKLN---------VPVQ-MGENWLGPEEMFKALSI---G 262 (359)
T ss_dssp CSCHHHHHHHHHHHHHHTCSCEECCSC---TTCHHHHHHHHHTCS---------SCEE-ECTTCCSHHHHHHHHHT---T
T ss_pred CCCHHHHHHHHHHHHHhCCCeEECCCC---hhhHHHHHHHHHhCC---------CCEE-eCCCCCCHHHHHHHHHc---C
Confidence 468899999999999999999997554 457788888877532 2322 2222 235566655443 3
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~ 224 (623)
..+.|.+ +. .+---+..+.+++++|+++|+. +..+
T Consensus 263 ~~d~v~i--k~-----------~~~GGi~~~~~i~~~A~~~g~~-~~~~ 297 (359)
T 1mdl_A 263 ACRLAMP--DA-----------MKIGGVTGWIRASALAQQFGIP-MSSH 297 (359)
T ss_dssp CCSEECC--BT-----------TTTTHHHHHHHHHHHHHHTTCC-BCCB
T ss_pred CCCEEee--cc-----------hhhCCHHHHHHHHHHHHHcCCe-Eeec
Confidence 4555433 11 1112356677899999999986 4443
No 423
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=64.27 E-value=1.1e+02 Score=30.19 Aligned_cols=120 Identities=15% Similarity=0.091 Sum_probs=63.9
Q ss_pred HHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEee--cCcc----c-------------ccCHHHHHHH
Q 006969 208 SMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI--PDTV----G-------------ITMPTEFGKL 268 (623)
Q Consensus 208 ~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l--~DTv----G-------------~~~P~~v~~l 268 (623)
+..+.+|+.|.+.+.-.. -.+..+.+...++++.+.++|+|.|-+ |=+- | .++...+.++
T Consensus 6 ~~f~~~~~~~~~~~i~~i-~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~ 84 (268)
T 1qop_A 6 NLFAQLNDRREGAFVPFV-TLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEM 84 (268)
T ss_dssp HHHHHHHHTTCCEEEEEE-ETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHhcCCceEEEEe-eCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHH
Confidence 344455555543221111 244456688899999999999997655 1110 1 1223445588
Q ss_pred HHHHHHhCCCCcceeEEEee-cCC-cchHHHH-HHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcc
Q 006969 269 IADIKANTPGIENVVISTHC-QND-LGLSTAN-TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 269 i~~l~~~~~~~~~v~i~~H~-HND-~GlAvAN-slaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
++.+|+..++ +|+.+=. -|. +-.++.. .-.+.++|++.|-.--..+ -.+++++..++.++
T Consensus 85 v~~ir~~~~~---~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~------e~~~~~~~~~~~~g 147 (268)
T 1qop_A 85 LAIIREKHPT---IPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPV------EESAPFRQAALRHN 147 (268)
T ss_dssp HHHHHHHCSS---SCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCG------GGCHHHHHHHHHTT
T ss_pred HHHHHhcCCC---CCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCH------HHHHHHHHHHHHcC
Confidence 9999988432 4543311 111 1112222 2357889999765543322 23455666666543
No 424
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=64.25 E-value=22 Score=37.07 Aligned_cols=105 Identities=18% Similarity=0.231 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
+..++.++-+++++.|.++|+++||=-+| +.|++..+++++..+- |...+=.-....|++..++.
T Consensus 193 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~i~~--- 257 (367)
T 3dg3_A 193 NRGWSAAESLRAMREMADLDLLFAEELCP---ADDVLSRRRLVGQLDM---------PFIADESVPTPADVTREVLG--- 257 (367)
T ss_dssp TTCSCHHHHHHHHHHTTTSCCSCEESCSC---TTSHHHHHHHHHHCSS---------CEEECTTCSSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEECCCC---cccHHHHHHHHHhCCC---------CEEecCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~ 229 (623)
...+.|.+ +.++- -+..+.+++..|+++|+. +..+....+
T Consensus 258 ~~~d~v~~-------------k~~~~-Git~~~~ia~~A~~~gi~-~~~~~~~es 297 (367)
T 3dg3_A 258 GSATAISI-------------KTART-GFTGSTRVHHLAEGLGLD-MVMGNQIDG 297 (367)
T ss_dssp TSCSEEEE-------------CHHHH-TTHHHHHHHHHHHHHTCE-EEECCSSCC
T ss_pred CCCCEEEe-------------ehhhh-hHHHHHHHHHHHHHcCCe-EEECCcCCc
No 425
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=63.85 E-value=29 Score=36.47 Aligned_cols=95 Identities=9% Similarity=0.060 Sum_probs=61.1
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeeccc-chhhHHHHHHHHhc
Q 006969 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWEAVKY 174 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~eal~~ 174 (623)
..++.++-+++++.|.++|++.||-.+| +.+++..+.+.+... +|. ++=.+. ...+++..++.
T Consensus 216 ~~~~~~~a~~~~~~l~~~~i~~iE~P~~---~~~~~~~~~l~~~~~---------iPI-a~dE~~~~~~~~~~~i~~--- 279 (393)
T 2og9_A 216 QQWDRPTAQRMCRIFEPFNLVWIEEPLD---AYDHEGHAALALQFD---------TPI-ATGEMLTSAAEHGDLIRH--- 279 (393)
T ss_dssp TCCCHHHHHHHHHHHGGGCCSCEECCSC---TTCHHHHHHHHHHCS---------SCE-EECTTCCSHHHHHHHHHT---
T ss_pred CCCCHHHHHHHHHHHHhhCCCEEECCCC---cccHHHHHHHHHhCC---------CCE-EeCCCcCCHHHHHHHHHC---
Confidence 3578999999999999999999997554 456778888877542 132 222222 44566655443
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD 219 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~ 219 (623)
..++.|.+ +. .+---+..+.++++.|+++|+.
T Consensus 280 ~~~d~v~i--k~-----------~~~GGit~~~~i~~~A~~~gi~ 311 (393)
T 2og9_A 280 RAADYLMP--DA-----------PRVGGITPFLKIASLAEHAGLM 311 (393)
T ss_dssp TCCSEECC--CH-----------HHHTSHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEee--Cc-----------cccCCHHHHHHHHHHHHHcCCE
Confidence 23455432 11 1111256677899999999985
No 426
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=63.84 E-value=1.2e+02 Score=30.02 Aligned_cols=224 Identities=14% Similarity=0.159 Sum_probs=128.7
Q ss_pred CceEEEeCCCcccCCCCCCC---CCHHHHHHHHHHHhHcCCCEEEEe---cCCCC-hhH-HHHHHHHHHHhccccccCCC
Q 006969 78 NYVRVFDTTLRDGEQSPGAT---LTSKEKLDIARQLAKLGVDIIEAG---FPAAS-KED-FEAVRTIAKEVGNAVDAESG 149 (623)
Q Consensus 78 ~~v~I~DtTLRDG~Q~~g~~---~t~e~Kl~Ia~~L~~~Gvd~IEvG---fP~~s-~~d-~e~v~~i~~~~~~~~~~~~~ 149 (623)
+.|.|-+.++..|.--.-++ =+.++-+..++.+.+.|.|.||.= |.... .++ .+.++.+.+..+.
T Consensus 6 ~~~~v~~~~~g~~~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~------- 78 (257)
T 2yr1_A 6 KAIKVRNIWIGGTEPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGE------- 78 (257)
T ss_dssp SCEEETTEEESSSSCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSS-------
T ss_pred ceEEEeeeeeCCCCcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccC-------
Confidence 34666666666665422122 245676777787788999999994 22111 111 1233344443211
Q ss_pred ccceEEeecccchh-----hH--H---HHHHHHhcCC-CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCC
Q 006969 150 YVPVICGLSRCNER-----DI--K---TAWEAVKYAK-RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGC 218 (623)
Q Consensus 150 l~~~i~~~~r~~~~-----dI--~---~a~eal~~a~-~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~ 218 (623)
.|.|..+ |...+ ++ + ..++.+...| .+.|.+-....+ .+.+.++.+++.|.
T Consensus 79 -~PiI~T~-Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~~----------------~~~~l~~~~~~~~~ 140 (257)
T 2yr1_A 79 -IPILFTI-RSEREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAYGE----------------RIADVRRMTEECSV 140 (257)
T ss_dssp -CCEEEEC-CCTTTTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGGGTT----------------HHHHHHHHHHHTTC
T ss_pred -CCEEEEE-eecccCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCCCh----------------hHHHHHHHHHhCCC
Confidence 2444433 33221 11 1 1122222235 778877554332 23356777888887
Q ss_pred CeEEEcccCCCCCC-HHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHh--CCCCcceeEEEeecCCcchH
Q 006969 219 DDVEFSPEDAGRSD-RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKAN--TPGIENVVISTHCQNDLGLS 295 (623)
Q Consensus 219 ~~V~f~~eda~r~d-~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~--~~~~~~v~i~~H~HND~GlA 295 (623)
+ |..|--|...+. .+.+.+.++.+.+.|||.+-|+=+. ..+.++.++.....+. .+. .|+-.=+= -.+|
T Consensus 141 k-vI~S~Hdf~~tP~~~el~~~~~~~~~~gaDivKia~~a--~s~~D~l~ll~~~~~~~~~~~---~P~I~~~M--G~~G 212 (257)
T 2yr1_A 141 W-LVVSRHYFDGTPRKETLLADMRQAERYGADIAKVAVMP--KSPEDVLVLLQATEEARRELA---IPLITMAM--GGLG 212 (257)
T ss_dssp E-EEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHCS---SCEEEEEC--TTTT
T ss_pred E-EEEEecCCCCCcCHHHHHHHHHHHHhcCCCEEEEEecc--CCHHHHHHHHHHHHHHhccCC---CCEEEEEC--CCCc
Confidence 4 666555544443 4788899999999999999987554 3467777777654432 121 34443222 2344
Q ss_pred HHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHh
Q 006969 296 TANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (623)
Q Consensus 296 vANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~ 335 (623)
.-.=+.+-..|--...+++. -....|..+++++...|+.
T Consensus 213 ~~SRi~~~~~GS~~Tf~~l~-~~sAPGQl~~~el~~~l~~ 251 (257)
T 2yr1_A 213 AITRLAGWLFGSAVTFAVGN-QSSAPGQIPIDDVRTVLSI 251 (257)
T ss_dssp HHHHHHGGGGTBCEEECBSS-SCSSTTCCBHHHHHHHHHH
T ss_pred chHHHHHHHhCCceEecCCC-CCCCCCCCCHHHHHHHHHH
Confidence 55666666778777777774 4447799999998877765
No 427
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=63.73 E-value=38 Score=34.80 Aligned_cols=78 Identities=10% Similarity=0.046 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHcCCcEEeec-------------------CcccccC---HHHHHHHHHHHHHhCCCCcceeEEEee---
Q 006969 234 KFLYEILGEVIKVGATTLNIP-------------------DTVGITM---PTEFGKLIADIKANTPGIENVVISTHC--- 288 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l~-------------------DTvG~~~---P~~v~~li~~l~~~~~~~~~v~i~~H~--- 288 (623)
+.+.+.++.+.++|.|.|-|- |-.|... +..+.++|+.+++.+ + .+|++-.
T Consensus 144 ~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~---~pv~vris~~ 219 (338)
T 1z41_A 144 QEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-D---GPLFVRVSAS 219 (338)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-C---SCEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-C---CcEEEEecCc
Confidence 455667777888999987652 3334433 445678899999987 2 3455442
Q ss_pred ---c--CCcchHHHHHHHHHHhCCCEEEeccC
Q 006969 289 ---Q--NDLGLSTANTIAGACAGARQVEVTIN 315 (623)
Q Consensus 289 ---H--ND~GlAvANslaAv~aGA~~Vd~Tv~ 315 (623)
| .+.-.++.-+....++|++.|+++-.
T Consensus 220 ~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~ 251 (338)
T 1z41_A 220 DYTDKGLDIADHIGFAKWMKEQGVDLIDCSSG 251 (338)
T ss_dssp CCSTTSCCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 1 12222334444556789999999753
No 428
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=63.70 E-value=1.1e+02 Score=29.74 Aligned_cols=124 Identities=8% Similarity=0.054 Sum_probs=71.6
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc--cc---CCCCCC-----
Q 006969 163 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS--PE---DAGRSD----- 232 (623)
Q Consensus 163 ~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~--~e---da~r~d----- 232 (623)
.+++..++.++.+|.+.|.+.......+.. .+..+.+ .+.+..+.+++.|++.+.++ .. +....+
T Consensus 30 ~~~~~~l~~~~~~G~~~iEl~~~~~~~~~~-~~~~~~~----~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~ 104 (295)
T 3cqj_A 30 ECWLERLQLAKTLGFDFVEMSVDETDERLS-RLDWSRE----QRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRA 104 (295)
T ss_dssp SCHHHHHHHHHHTTCSEEEEECCSSHHHHG-GGGCCHH----HHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHH
T ss_pred CCHHHHHHHHHhcCCCEEEEecCCcccccC-cccCCHH----HHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHH
Confidence 477778888888999999998665433321 1233432 34456677888898633332 11 112223
Q ss_pred --HHHHHHHHHHHHHcCCcEEeecCcc---cccCHHHHHHHHHHHHHhCC--CCcceeEEEeecCC
Q 006969 233 --RKFLYEILGEVIKVGATTLNIPDTV---GITMPTEFGKLIADIKANTP--GIENVVISTHCQND 291 (623)
Q Consensus 233 --~e~l~~~~~~~~~aGa~~I~l~DTv---G~~~P~~v~~li~~l~~~~~--~~~~v~i~~H~HND 291 (623)
.+++.+.++.+.+.|+..|.++-.. +.........+++.+++..+ ...++.|.+|.|+.
T Consensus 105 ~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 170 (295)
T 3cqj_A 105 QGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDY 170 (295)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCC
Confidence 3578888889999999999886110 11223344444444433211 00136789998863
No 429
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=63.63 E-value=28 Score=38.64 Aligned_cols=85 Identities=16% Similarity=0.162 Sum_probs=57.6
Q ss_pred CCCCC--CHHHHHHHHHHHHHcC-----CcEEeec--Cc----ccccCHHHHHHHHHHHHHh----CCCCcceeEEEeec
Q 006969 227 DAGRS--DRKFLYEILGEVIKVG-----ATTLNIP--DT----VGITMPTEFGKLIADIKAN----TPGIENVVISTHCQ 289 (623)
Q Consensus 227 da~r~--d~e~l~~~~~~~~~aG-----a~~I~l~--DT----vG~~~P~~v~~li~~l~~~----~~~~~~v~i~~H~H 289 (623)
|+++. +.+.+++.++..++.| |++|-+. -| ......+|+.+++..++.. .+...+++|++=
T Consensus 240 DGG~~~~~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISID-- 317 (545)
T 2bmb_A 240 DGGEHFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSID-- 317 (545)
T ss_dssp TTTTTTTCHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEEE--
T ss_pred CCCcCcCCHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEe--
Confidence 77776 7999999999999999 9998776 33 2234456777765544432 122225889984
Q ss_pred CCcchHHHHHHHHHHhCCCEEEeccCC
Q 006969 290 NDLGLSTANTIAGACAGARQVEVTING 316 (623)
Q Consensus 290 ND~GlAvANslaAv~aGA~~Vd~Tv~G 316 (623)
++--. -+.+|+++||+.|+---+|
T Consensus 318 -T~~a~--VaeaAl~aGadIINDVsg~ 341 (545)
T 2bmb_A 318 -TYRSN--VAKEAIKVGVDIINDISGG 341 (545)
T ss_dssp -CCCHH--HHHHHHHTTCCEEEETTTT
T ss_pred -CCcHH--HHHHHHHcCCCEEEeCCCC
Confidence 44443 4568999999999644333
No 430
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=63.53 E-value=11 Score=38.30 Aligned_cols=182 Identities=14% Similarity=0.099 Sum_probs=98.7
Q ss_pred CCHHHHHHHHHHHhHc----CCCEE-EEec---CCCChhH------HHHHHHHHHHhccccccCCCccceEEeecccchh
Q 006969 98 LTSKEKLDIARQLAKL----GVDII-EAGF---PAASKED------FEAVRTIAKEVGNAVDAESGYVPVICGLSRCNER 163 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~----Gvd~I-EvGf---P~~s~~d------~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~ 163 (623)
=+.++-+++|+.|.++ |+..+ =.+| |+.++.. .+-++.+.+..... |+ +.++- -....
T Consensus 31 e~~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~-----Gl-p~~Te--v~d~~ 102 (285)
T 3sz8_A 31 ESLDFTLDVCGEYVAVTRKLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARF-----GV-PVITD--VHEAE 102 (285)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHH-----CC-CEEEE--CCSGG
T ss_pred CCHHHHHHHHHHHHHHHHhheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhc-----CC-eEEEE--eCCHH
Confidence 3789999999999875 46543 3333 5666532 23344333322110 22 22221 12344
Q ss_pred hHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHH
Q 006969 164 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEV 243 (623)
Q Consensus 164 dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~ 243 (623)
.++... +. ++.+.| +..+. +. .+ .++++.+.|+. |.++- +.-.+++.+...++.+
T Consensus 103 ~v~~l~----~~-vd~lqI--gA~~~--------~n---~~----LLr~va~~gkP-VilK~--G~~~t~~ei~~ave~i 157 (285)
T 3sz8_A 103 QAAPVA----EI-ADVLQV--PAFLA--------RQ---TD----LVVAIAKAGKP-VNVKK--PQFMSPTQLKHVVSKC 157 (285)
T ss_dssp GHHHHH----TT-CSEEEE--CGGGT--------TC---HH----HHHHHHHTSSC-EEEEC--CTTSCGGGTHHHHHHH
T ss_pred HHHHHH----Hh-CCEEEE--Ccccc--------CC---HH----HHHHHHccCCc-EEEeC--CCCCCHHHHHHHHHHH
Confidence 554432 22 566554 33221 11 12 44444567875 77743 2124555666777788
Q ss_pred HHcCCcEEeecCccccc-CHHHH--HHHHHHHHHhCCCCcceeEEE-eecCC----------cc---hHHHHHHHHHHhC
Q 006969 244 IKVGATTLNIPDTVGIT-MPTEF--GKLIADIKANTPGIENVVIST-HCQND----------LG---LSTANTIAGACAG 306 (623)
Q Consensus 244 ~~aGa~~I~l~DTvG~~-~P~~v--~~li~~l~~~~~~~~~v~i~~-H~HND----------~G---lAvANslaAv~aG 306 (623)
.+.|-+.|.||.-.-.. .+..+ -.-|..+++.+++ +||++ ..|-- .| +-..-+++|+.+|
T Consensus 158 ~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~---~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~G 234 (285)
T 3sz8_A 158 GEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGG---CPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVG 234 (285)
T ss_dssp HHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTS---CCEEEETTTTCC---------------HHHHHHHHHHHC
T ss_pred HHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCC---CCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhC
Confidence 88898888887643322 11110 2245667887753 56887 67751 22 3367789999999
Q ss_pred CC--EEEeccC
Q 006969 307 AR--QVEVTIN 315 (623)
Q Consensus 307 A~--~Vd~Tv~ 315 (623)
|+ .|+.=..
T Consensus 235 A~gl~IE~H~~ 245 (285)
T 3sz8_A 235 IAGLFLEAHPD 245 (285)
T ss_dssp CSEEEEEEESC
T ss_pred CCEEEEEeccC
Confidence 99 6765444
No 431
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=63.33 E-value=12 Score=37.26 Aligned_cols=130 Identities=9% Similarity=0.007 Sum_probs=68.3
Q ss_pred hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHH
Q 006969 162 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILG 241 (623)
Q Consensus 162 ~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~ 241 (623)
..+.+..++++..+|.+.|.+-++-++. .+.+.+..++.+ ++.... +..++ .+..++++..++++
T Consensus 22 ~p~~~~~~~~l~~~Gad~ielg~pr~~~-----~g~~~~~~~~~l-------~~~~~~-~~pn~--~~~~~~~~~~~f~~ 86 (264)
T 1xm3_A 22 YPSFDIQKEAVAVSESDILTFAVRRMNI-----FEASQPNFLEQL-------DLSKYT-LLPNT--AGASTAEEAVRIAR 86 (264)
T ss_dssp SSCHHHHHHHHHHHTCSEEEEETTSSTT-----C-------CTTC-------CGGGSE-EEEEC--TTCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCeEEEEccccccc-----CCCCHHHHHHHH-------HhcCCe-EcCCc--cccCCHHHHHHHHH
Confidence 3455555566666789988776664431 144444444432 233332 22343 45678888778888
Q ss_pred HHHHcCCcEE----eecCcccccCHHHHHHHHHHHHHhCCCCcceeEE-EeecCCcchHHHHHHHHHHhCCCEEEeccCC
Q 006969 242 EVIKVGATTL----NIPDTVGITMPTEFGKLIADIKANTPGIENVVIS-THCQNDLGLSTANTIAGACAGARQVEVTING 316 (623)
Q Consensus 242 ~~~~aGa~~I----~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~-~H~HND~GlAvANslaAv~aGA~~Vd~Tv~G 316 (623)
.+.++|.+.+ .++|. ...+++..++++.+++.++. ++.+. +-+|+ . .-+..+.++|++.| .+..|
T Consensus 87 ~a~~agg~~~i~l~i~~d~--~~~~~e~~~~~~~a~~~~~~--g~~vi~~~~~~-~----~~a~~~~~~gad~v-~~~~~ 156 (264)
T 1xm3_A 87 LAKASGLCDMIKVEVIGCS--RSLLPDPVETLKASEQLLEE--GFIVLPYTSDD-V----VLARKLEELGVHAI-MPGAS 156 (264)
T ss_dssp HHHHTTCCSSEEECCBCCT--TTCCBCHHHHHHHHHHHHHT--TCCEEEEECSC-H----HHHHHHHHHTCSCB-EECSS
T ss_pred HHHHcCCCCeEEEeecCCC--cccccchHHHHHHHHHHHCC--CeEEEEEcCCC-H----HHHHHHHHhCCCEE-EECCc
Confidence 8888854433 34442 11134566777777765321 12234 33344 2 34567778899998 55444
No 432
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=63.28 E-value=76 Score=33.10 Aligned_cols=126 Identities=19% Similarity=0.236 Sum_probs=68.6
Q ss_pred HHHHHHHhHcCCCEEEEecCCCChhH-HHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCCEEEE
Q 006969 104 LDIARQLAKLGVDIIEAGFPAASKED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHT 182 (623)
Q Consensus 104 l~Ia~~L~~~Gvd~IEvGfP~~s~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v~i 182 (623)
.+.++.|.++|+|.|++..+.-.+.. .+.++.+.+..+ .+.+.+-. ...++.+.+.+ +|++.|.+
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~---------~~Vivg~v-~t~e~A~~l~~----aGaD~I~V 172 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMN---------IDVIVGNV-VTEEATKELIE----NGADGIKV 172 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCC---------CEEEEEEE-CSHHHHHHHHH----TTCSEEEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcC---------CcEEEccC-CCHHHHHHHHH----cCcCEEEE
Confidence 56788889999999999655433332 467777776531 13443322 24445544443 59998887
Q ss_pred EecCCHHHHHH-H--hCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 006969 183 FIATSGIHMEH-K--LRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 254 (623)
Q Consensus 183 ~~~~Sd~h~~~-~--l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~ 254 (623)
....-.++..+ . .+... +..+.++.+.++..++. |.- +++=.+++.+.+. ..+||+.+.+.
T Consensus 173 G~~~Gs~~~tr~~~g~g~p~---~~~i~~v~~~~~~~~iP-VIA---~GGI~~~~di~ka----la~GAd~V~vG 236 (361)
T 3khj_A 173 GIGPGSICTTRIVAGVGVPQ---ITAIEKCSSVASKFGIP-IIA---DGGIRYSGDIGKA----LAVGASSVMIG 236 (361)
T ss_dssp CSSCCTTCCHHHHTCBCCCH---HHHHHHHHHHHHHHTCC-EEE---ESCCCSHHHHHHH----HHHTCSEEEES
T ss_pred ecCCCcCCCcccccCCCCCc---HHHHHHHHHHHhhcCCe-EEE---ECCCCCHHHHHHH----HHcCCCEEEEC
Confidence 32111111111 1 22222 34445555556666665 332 4555566655443 45699988764
No 433
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=63.21 E-value=65 Score=33.56 Aligned_cols=144 Identities=12% Similarity=0.085 Sum_probs=70.2
Q ss_pred HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCC----HHHHHHHHHHHHHHHHHcC--CCeEEEcccC------CCCCC
Q 006969 165 IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKT----KQQVVEIARSMVKFARSLG--CDDVEFSPED------AGRSD 232 (623)
Q Consensus 165 I~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t----~ee~l~~~~~~v~~ak~~G--~~~V~f~~ed------a~r~d 232 (623)
++++++..+..|.+.|.+....... ......+ .+...+.+.++.++|++.| +. +.+-+.. ..-.+
T Consensus 118 ~~~~i~~A~~LGa~~vvv~~G~~g~--~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~-l~lE~~~~e~~~~~~~~t 194 (394)
T 1xla_A 118 VLHNIDLAAEMGAETFVMWGGREGS--EYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLR-IALEPKPNEPRGDIFLPT 194 (394)
T ss_dssp HHHHHHHHHHTTCSEEEECCTTCEE--SSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCE-EEECCCSSSSSSEESSCS
T ss_pred HHHHHHHHHHhCCCEEEECCCCCcc--ccccccCHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEEecCCCCCCccccCCC
Confidence 4556666667799988765432100 0000122 3455666777788888999 53 5443321 12246
Q ss_pred HHHHHHHHHHHHHcCCc-EEee-cCcccccC-HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE
Q 006969 233 RKFLYEILGEVIKVGAT-TLNI-PDTVGITM-PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 309 (623)
Q Consensus 233 ~e~l~~~~~~~~~aGa~-~I~l-~DTvG~~~-P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 309 (623)
++.+.++++. .+-. .+.+ .||.=... ...+.+.+..+.. .+ -...+|.+|..|. ..+
T Consensus 195 ~~~~~~li~~---v~~pn~vgl~lD~~H~~~~g~d~~~~i~~~~~-~~----rI~~vHl~D~~g~-----------~~d- 254 (394)
T 1xla_A 195 VGHGLAFIEQ---LEHGDIVGLNPETGHEQMAGLNFTHGIAQALW-AE----KLFHIDLNGQRGI-----------KYD- 254 (394)
T ss_dssp HHHHHHHHTT---CTTGGGEEECCBHHHHHTTTCCHHHHHHHHHH-TT----CBCCCEECBCCSS-----------SSC-
T ss_pred HHHHHHHHHH---hCCCCceEEEEecCcccccCCCHHHHHHHHhc-cC----ceeEEEecCCCCC-----------CCC-
Confidence 6777666654 3543 2333 37632111 1112223333221 11 2357888885331 000
Q ss_pred EEeccCCccCccCcc-cHHHHHHHHHhc
Q 006969 310 VEVTINGIGERAGNA-SLEEVVMAFKCR 336 (623)
Q Consensus 310 Vd~Tv~GlGERaGNa-~lEevv~~L~~~ 336 (623)
+-.. +| .|+. +...++..|+..
T Consensus 255 -~~~~--~G--~G~i~~~~~~~~~L~~~ 277 (394)
T 1xla_A 255 -QDLV--FG--HGDLTSAFFTVDLLENG 277 (394)
T ss_dssp -CCBC--TT--SSCHHHHHHHHHHHHHC
T ss_pred -CCCC--CC--CCcHHHHHHHHHHHHHh
Confidence 0011 33 3666 677788888776
No 434
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=63.09 E-value=1.5e+02 Score=30.93 Aligned_cols=164 Identities=14% Similarity=0.111 Sum_probs=92.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
..+.++-.+-++.+.+.|++.|.+=.......|.+.++.+.+.++..+ ...+-+-.....++..+.++.+...+
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~~~~~d~~~v~avR~a~g~d~------~l~vDan~~~~~~~A~~~~~~l~~~~ 222 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGRAPRKDAANLRAMRQRVGADV------EILVDANQSLGRHDALAMLRILDEAG 222 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHHCTTS------EEEEECTTCCCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCCCHHHHHHHHHHHHHHcCCCc------eEEEECCCCcCHHHHHHHHHHHHhcC
Confidence 457888889999999999999988432223457888898888765421 11222222233444444455666677
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHH-H-cCCCeEEEcccCCCCCCHHHHHHHHHHHHHcC-CcEEee
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFAR-S-LGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG-ATTLNI 253 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak-~-~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aG-a~~I~l 253 (623)
+..|.=.++..+ ++ ..+..+ + .++. |. . |.+-.+++.+. .+++.| +|.|+
T Consensus 223 i~~iEqP~~~~d--------------~~----~~~~l~~~~~~iP-Ia--~-dE~i~~~~~~~----~~i~~~~~d~v~- 275 (389)
T 3ozy_A 223 CYWFEEPLSIDD--------------IE----GHRILRAQGTPVR-IA--T-GENLYTRNAFN----DYIRNDAIDVLQ- 275 (389)
T ss_dssp CSEEESCSCTTC--------------HH----HHHHHHTTCCSSE-EE--E-CTTCCHHHHHH----HHHHTTCCSEEC-
T ss_pred CCEEECCCCccc--------------HH----HHHHHHhcCCCCC-EE--e-CCCCCCHHHHH----HHHHcCCCCEEE-
Confidence 777653332211 11 122233 2 3332 32 2 44445554443 344555 45554
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHH
Q 006969 254 PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 299 (623)
Q Consensus 254 ~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANs 299 (623)
.|..=+.-..+..++....+++ ++++..||. ..+++++-+
T Consensus 276 ik~~~~GGit~~~~ia~~A~~~-----gi~~~~h~~-~~~i~~aa~ 315 (389)
T 3ozy_A 276 ADASRAGGITEALAISASAASA-----HLAWNPHTF-NDIITVAAN 315 (389)
T ss_dssp CCTTTSSCHHHHHHHHHHHHHT-----TCEECCCCT-TSHHHHHHH
T ss_pred eCccccCCHHHHHHHHHHHHHc-----CCEEEecCC-CcHHHHHHH
Confidence 4666555667777777777664 256777764 355655544
No 435
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=63.06 E-value=12 Score=38.81 Aligned_cols=73 Identities=16% Similarity=0.097 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHcCCcEEeecCccc-ccCHHHHHHHH----HHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE
Q 006969 235 FLYEILGEVIKVGATTLNIPDTVG-ITMPTEFGKLI----ADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 309 (623)
Q Consensus 235 ~l~~~~~~~~~aGa~~I~l~DTvG-~~~P~~v~~li----~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 309 (623)
.+.+.+++.+++|++.|.+.|+.| .+.|..+.+++ +.+.+.++.. .+++-.||..+ +. ....+ .+.|++.
T Consensus 194 ~~~~~~~~~~~aGad~i~i~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~-g~~~i~~~~G~-~~-~l~~l--~~~g~d~ 268 (359)
T 2inf_A 194 MIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE-NVPLIMFGVGA-SH-LAGDW--HDLPLDV 268 (359)
T ss_dssp HHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGG-CSCEEEECTTC-GG-GHHHH--HTSSCSE
T ss_pred HHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHc-CCcEEEEcCCc-HH-HHHHH--HHhCCCE
Confidence 344556677789999999999766 45577766653 2222233211 25677888766 32 22222 2678887
Q ss_pred EEe
Q 006969 310 VEV 312 (623)
Q Consensus 310 Vd~ 312 (623)
+..
T Consensus 269 ~~~ 271 (359)
T 2inf_A 269 VGL 271 (359)
T ss_dssp EEC
T ss_pred EEe
Confidence 754
No 436
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=62.95 E-value=17 Score=39.35 Aligned_cols=79 Identities=20% Similarity=0.252 Sum_probs=53.1
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEeec-Ccc--c---ccCHHHHHHH---HHHHHHhCCCCc-ceeEEEeecCCcchHH
Q 006969 227 DAGRSDRKFLYEILGEVIKVGATTLNIP-DTV--G---ITMPTEFGKL---IADIKANTPGIE-NVVISTHCQNDLGLST 296 (623)
Q Consensus 227 da~r~d~e~l~~~~~~~~~aGa~~I~l~-DTv--G---~~~P~~v~~l---i~~l~~~~~~~~-~v~i~~H~HND~GlAv 296 (623)
|++ .+++.+++-++..++.||+.|-+. .+. | +...+|+.++ |+.+++..+... +++|++=.=+ -
T Consensus 206 Dgg-~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~---~-- 279 (442)
T 3mcm_A 206 DGN-FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRK---L-- 279 (442)
T ss_dssp CCS-SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCC---H--
T ss_pred CCC-CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCC---H--
Confidence 667 888999999999999999998876 111 1 2234567765 666776332211 3788885544 3
Q ss_pred HHHHHHHH--hCCCE-EE
Q 006969 297 ANTIAGAC--AGARQ-VE 311 (623)
Q Consensus 297 ANslaAv~--aGA~~-Vd 311 (623)
.-+.+|++ +||+. |+
T Consensus 280 ~VaeaAL~~~aGa~i~IN 297 (442)
T 3mcm_A 280 EVMQKILAKHHDIIWMIN 297 (442)
T ss_dssp HHHHHHHHHHGGGCCEEE
T ss_pred HHHHHHHhhCCCCCEEEE
Confidence 34467888 99998 74
No 437
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=62.85 E-value=29 Score=36.44 Aligned_cols=101 Identities=13% Similarity=0.090 Sum_probs=64.7
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcC
Q 006969 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 175 (623)
..++.++-+++++.|.++|+.+||=-+| +.|++..+++++... +|...+=.-....|+...++. .
T Consensus 203 ~~~~~~~A~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------ipIa~dE~~~~~~~~~~~~~~---~ 267 (382)
T 3dgb_A 203 QAWDEAVALRACRILGGNGIDLIEQPIS---RNNRAGMVRLNASSP---------APIMADESIECVEDAFNLARE---G 267 (382)
T ss_dssp TCBCHHHHHHHHHHHHTTTCCCEECCBC---TTCHHHHHHHHHHCS---------SCEEESTTCSSHHHHHHHHHH---T
T ss_pred CCCCHHHHHHHHHHHhhcCcCeeeCCCC---ccCHHHHHHHHHhCC---------CCEEeCCCcCCHHHHHHHHHc---C
Confidence 4578999999999999999999997544 456778888877532 132222111245666665553 2
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ 225 (623)
..+.|.+ .. ++---+..+.++++.|+++|+. +..+.
T Consensus 268 ~~d~v~~--k~-----------~~~GGit~~~~i~~~A~~~gi~-~~~~~ 303 (382)
T 3dgb_A 268 AASVFAL--KI-----------AKNGGPRATLRTAAIAEAAGIG-LYGGT 303 (382)
T ss_dssp CCSEEEE--CH-----------HHHTSHHHHHHHHHHHHHHTCE-EEECC
T ss_pred CCCEEEe--cc-----------cccCCHHHHHHHHHHHHHcCCe-EeecC
Confidence 4555543 11 1112256677889999999985 55543
No 438
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=62.85 E-value=11 Score=39.29 Aligned_cols=72 Identities=15% Similarity=0.134 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHcCCcEEeecCcccccCHHH---------HHHHHHHHH-HhCC----CCcceeEEEeecCCcchHHHHH
Q 006969 234 KFLYEILGEVIKVGATTLNIPDTVGITMPTE---------FGKLIADIK-ANTP----GIENVVISTHCQNDLGLSTANT 299 (623)
Q Consensus 234 e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~---------v~~li~~l~-~~~~----~~~~v~i~~H~HND~GlAvANs 299 (623)
+.+.+.+++.+++||+.|.+.|+.|...+.+ +.++++.++ +..| + +++.+||.++ +.-+-
T Consensus 197 ~~~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~---~p~i~~~~G~-~~~l~-- 270 (367)
T 1r3s_A 197 DALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAP---VPMIIFAKDG-HFALE-- 270 (367)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCC---CCEEEEETTC-GGGHH--
T ss_pred HHHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCC---CCeEEEcCCc-HHHHH--
Q ss_pred HHHHHhCCCEEEe
Q 006969 300 IAGACAGARQVEV 312 (623)
Q Consensus 300 laAv~aGA~~Vd~ 312 (623)
.-.+.|++.+..
T Consensus 271 -~l~~~g~d~i~~ 282 (367)
T 1r3s_A 271 -ELAQAGYEVVGL 282 (367)
T ss_dssp -HHTTSSCSEEEC
T ss_pred -HHHhcCCCEEEe
No 439
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=62.80 E-value=1.2e+02 Score=29.96 Aligned_cols=202 Identities=12% Similarity=0.044 Sum_probs=106.8
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcC
Q 006969 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 175 (623)
..|-.+-...+-+.+.+.|++.+-.........+.+.++.+... .++ | |..+.. ...+ +...+.+...
T Consensus 75 ~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~---~vd---g----iIi~~~-~~~~-~~~~~~~~~~ 142 (338)
T 3dbi_A 75 GIYFSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDL---RCD---A----IMIYPR-FLSV-DEIDDIIDAH 142 (338)
T ss_dssp TTHHHHHHHHHHHHHHHTTCEEEEEECTTSHHHHHHHHHHHHHT---TCS---E----EEECCS-SSCH-HHHHHHHHHC
T ss_pred ChhHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhC---CCC---E----EEEeCC-CCCh-HHHHHHHHcC
Confidence 34556777788888999999766553222222234556655542 111 2 211211 1111 2222334446
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE-cccCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGATTLNIP 254 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f-~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~ 254 (623)
++|.|.+-....+... .....+. .+....+++++.++|...+.| +.........+.+.-+.+++.+.|...-...
T Consensus 143 ~iPvV~~~~~~~~~~~-~~V~~D~---~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~ 218 (338)
T 3dbi_A 143 SQPIMVLNRRLRKNSS-HSVWCDH---KQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKL 218 (338)
T ss_dssp SSCEEEESSCCSSSGG-GEECBCH---HHHHHHHHHHHHHTTCCSEEEECCCTTCHHHHHHHHHHHHHHHHTTCCCCGGG
T ss_pred CCCEEEEcCCCCCCCC-CEEEECh---HHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHHHCCCCCCcce
Confidence 7887755322221111 1233433 355667788888899876665 3222222334566667777888885421100
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE-EEeccCCcc
Q 006969 255 DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ-VEVTINGIG 318 (623)
Q Consensus 255 DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~-Vd~Tv~GlG 318 (623)
-..|-..++.-++.+..+.+..+..+ .+=|.||. +|+.-..++-++|.+. =|.+|.|++
T Consensus 219 ~~~~~~~~~~~~~~~~~ll~~~~~~~----ai~~~nd~-~A~g~~~al~~~G~~vP~di~vvg~D 278 (338)
T 3dbi_A 219 IANGKWTPASGAEGVEMLLERGAKFS----ALVASNDD-MAIGAMKALHERGVAVPEQVSVIGFD 278 (338)
T ss_dssp EECCCSSHHHHHHHHHHHHHTTCCCS----EEEESSHH-HHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred EEeCCCCHHHHHHHHHHHHcCCCCCe----EEEECChH-HHHHHHHHHHHcCCCCCCCeEEEEEC
Confidence 01244567777788877776555432 45577763 4555445556678652 256677765
No 440
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=62.77 E-value=17 Score=37.85 Aligned_cols=98 Identities=18% Similarity=0.191 Sum_probs=62.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
.++.++ +++++.|.+.|+++||=.+| +.|++..+++.+..+ +|...+=.-....+++..++. ..
T Consensus 199 ~~~~~~-~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------ipIa~dE~~~~~~~~~~~i~~---~~ 262 (375)
T 1r0m_A 199 AYTLAD-AGRLRQLDEYDLTYIEQPLA---WDDLVDHAELARRIR---------TPLCLDESVASASDARKALAL---GA 262 (375)
T ss_dssp CCCGGG-HHHHHTTGGGCCSCEECCSC---TTCSHHHHHHHHHCS---------SCEEESTTCCSHHHHHHHHHH---TS
T ss_pred CCCHHH-HHHHHHHHhCCCcEEECCCC---cccHHHHHHHHHhCC---------CCEEecCccCCHHHHHHHHHh---CC
Confidence 467888 99999999999999997554 456777777877532 132222111245677666554 24
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~ 224 (623)
.+.|.+ ..+ + ---+..+.++++.|+++|+. +..+
T Consensus 263 ~d~v~i--k~~---------~--~GGit~~~~i~~~A~~~g~~-~~~~ 296 (375)
T 1r0m_A 263 GGVINL--KVA---------R--VGGHAESRRVHDVAQSFGAP-VWCG 296 (375)
T ss_dssp CSEEEE--CTT---------T--TTSHHHHHHHHHHHHHTTCC-EEEC
T ss_pred CCEEEE--Ccc---------h--hcCHHHHHHHHHHHHHcCCc-EEec
Confidence 566554 111 1 12255677889999999987 4343
No 441
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=62.57 E-value=29 Score=34.02 Aligned_cols=115 Identities=14% Similarity=0.163 Sum_probs=66.0
Q ss_pred hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccc-------C-------
Q 006969 162 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-------D------- 227 (623)
Q Consensus 162 ~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~e-------d------- 227 (623)
..+++.+++.++.+|.+.|.++..-. + ..+. +.+.+..+.+++.|++.+.+++- +
T Consensus 20 ~~~l~~~l~~~~~~G~~~vEl~~~~~--~-----~~~~----~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~ 88 (290)
T 3tva_A 20 DAGLGVHLEVAQDLKVPTVQVHAPHP--H-----TRTR----EHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTART 88 (290)
T ss_dssp SSSSSBCHHHHHHTTCSEEEEECCCG--G-----GCSH----HHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCEEEecCCCC--C-----cCCH----HHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccc
Confidence 45565666667778999999876421 1 1232 23456667888899863333220 0
Q ss_pred -CC------CCCHHHHHHHHHHHHHcCCcEEeecCccccc---CHHHHHHHHHHHHHhCC--CCcceeEEEeec
Q 006969 228 -AG------RSDRKFLYEILGEVIKVGATTLNIPDTVGIT---MPTEFGKLIADIKANTP--GIENVVISTHCQ 289 (623)
Q Consensus 228 -a~------r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~---~P~~v~~li~~l~~~~~--~~~~v~i~~H~H 289 (623)
++ +...+++.+.++.+.+.|+..|.+. .|.. .+..+..+++.+++..+ ...++.|.+|.|
T Consensus 89 ~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~--~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 160 (290)
T 3tva_A 89 VGLVPLETRASRVAEMKEISDFASWVGCPAIGLH--IGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETG 160 (290)
T ss_dssp SSSCSTTTHHHHHHHHHHHHHHHHHHTCSEEEEC--CCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEc--CCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 00 0123678888888999999998873 1211 33444444444433211 011477888887
No 442
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=62.43 E-value=54 Score=33.87 Aligned_cols=78 Identities=12% Similarity=0.029 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHcCCcEEeec-------------------CcccccCH---HHHHHHHHHHHHhCCCCcceeEEEeec---
Q 006969 235 FLYEILGEVIKVGATTLNIP-------------------DTVGITMP---TEFGKLIADIKANTPGIENVVISTHCQ--- 289 (623)
Q Consensus 235 ~l~~~~~~~~~aGa~~I~l~-------------------DTvG~~~P---~~v~~li~~l~~~~~~~~~v~i~~H~H--- 289 (623)
...+.++.+.++|.|.|-|- |-.|...- .-+.++|+.+|+.+ + .+|++-..
T Consensus 145 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~---~pv~vRls~~~ 220 (340)
T 3gr7_A 145 AFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-D---GPLFVRISASD 220 (340)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-C---SCEEEEEESCC
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-C---CceEEEecccc
Confidence 34455566778899877662 44465433 33578889999987 2 33444333
Q ss_pred -----CCcchHHHHHHHHHHhCCCEEEeccCC
Q 006969 290 -----NDLGLSTANTIAGACAGARQVEVTING 316 (623)
Q Consensus 290 -----ND~GlAvANslaAv~aGA~~Vd~Tv~G 316 (623)
++.--.+.-+....++|++.|+++-.+
T Consensus 221 ~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~ 252 (340)
T 3gr7_A 221 YHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGA 252 (340)
T ss_dssp CSTTSCCGGGHHHHHHHHHHTTCCEEEEECCC
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 123344445555567899999998644
No 443
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=62.16 E-value=71 Score=34.91 Aligned_cols=131 Identities=17% Similarity=0.138 Sum_probs=73.0
Q ss_pred HHHHHHHHHhHcCCCEEEEecCCC-ChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCCEE
Q 006969 102 EKLDIARQLAKLGVDIIEAGFPAA-SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRI 180 (623)
Q Consensus 102 ~Kl~Ia~~L~~~Gvd~IEvGfP~~-s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v 180 (623)
+-.+.++.|.+.|+|.|++....- +..-.+.++.+.+..++ .+.+.+-. ...++.+.+.++ |++.|
T Consensus 256 d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~--------~~vi~g~v-~t~e~a~~~~~a----Gad~i 322 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPS--------LNIIAGNV-ATAEATKALIEA----GANVV 322 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTT--------SEEEEEEE-CSHHHHHHHHHH----TCSEE
T ss_pred chHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCC--------ceEEeeee-ccHHHHHHHHHh----CCCEE
Confidence 446678899999999999975422 23335778888775422 13333221 244555555554 88888
Q ss_pred EEEecCCHHHHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 006969 181 HTFIATSGIHMEH-KLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 254 (623)
Q Consensus 181 ~i~~~~Sd~h~~~-~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~ 254 (623)
.+-...-.++..+ .-+.... .+..+.++.+.+++.++. |.. +++-.+++.+.+. ..+||+.+.+.
T Consensus 323 ~vg~g~gsi~~~~~~~g~g~p-~~~~l~~v~~~~~~~~iP-VIa---~GGI~~~~di~ka----la~GA~~V~vG 388 (511)
T 3usb_A 323 KVGIGPGSICTTRVVAGVGVP-QLTAVYDCATEARKHGIP-VIA---DGGIKYSGDMVKA----LAAGAHVVMLG 388 (511)
T ss_dssp EECSSCSTTCCHHHHHCCCCC-HHHHHHHHHHHHHTTTCC-EEE---ESCCCSHHHHHHH----HHTTCSEEEES
T ss_pred EECCCCccccccccccCCCCC-cHHHHHHHHHHHHhCCCc-EEE---eCCCCCHHHHHHH----HHhCchhheec
Confidence 7521111111111 1222211 244555666777777775 443 4555666655443 45799888764
No 444
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=62.09 E-value=28 Score=37.62 Aligned_cols=136 Identities=18% Similarity=0.259 Sum_probs=84.5
Q ss_pred CCCHHHHHHHHHH-HhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEe--ecccchhhHHHHHHHHh
Q 006969 97 TLTSKEKLDIARQ-LAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG--LSRCNERDIKTAWEAVK 173 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~-L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~--~~r~~~~dI~~a~eal~ 173 (623)
.+|.+|-+++++. +++.++-.||=+++ ++||+..+.+.+.++.. ++ |++ +...+.++++.+++.
T Consensus 280 ~~t~~Elid~y~~lle~ypIv~IEDPl~---~dD~eg~a~Lt~~lg~~-------iq-IvGDDl~vTn~~~i~~~Ie~-- 346 (452)
T 3otr_A 280 HLTGEKLKEVYEGWLKKYPIISVEDPFD---QDDFASFSAFTKDVGEK-------TQ-VIGDDILVTNILRIEKALKD-- 346 (452)
T ss_dssp EECHHHHHHHHHHHHHHSCEEEEECCSC---TTCHHHHHHHHHHHTTT-------SE-EEESTTTTTCHHHHHHHHHH--
T ss_pred cccHHHHHHHHHHHHhhhCceEEecCCC---hhhHHHHHHHHHhhCCC-------eE-EEeCccccCCHHHHHHHHhc--
Confidence 5899999999976 57899999998775 56888888888876422 12 233 333467888887764
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 006969 174 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 253 (623)
Q Consensus 174 ~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l 253 (623)
--.+.|.+ +.+ +.| .+-.+.++++.|+++|+. +.++. ..+.++-.++.+ .++..++.-|-.
T Consensus 347 -~a~n~IlI--Kvn------QIG-----gITEalka~~lA~~~G~~-vmvsh-rSGETeD~~iAd---LaVgl~~gqIKt 407 (452)
T 3otr_A 347 -KACNCLLL--KVN------QIG-----SVTEAIEACLLAQKSGWG-VQVSH-RSGETEDSFIAD---LVVGLRCGQIKS 407 (452)
T ss_dssp -TCCSEEEE--CHH------HHC-----CHHHHHHHHHHHHHTTCE-EEEEC-CSSCCSCCHHHH---HHHHTTCCEEEC
T ss_pred -CCCCEEEe--ecc------ccc-----cHHHHHHHHHHHHHcCCe-EEEeC-CCCCCchhHHHH---HHHHcCCCcccc
Confidence 12344432 221 112 245567789999999985 66655 233455456544 455667767763
Q ss_pred cCcccccCHHHHHH
Q 006969 254 PDTVGITMPTEFGK 267 (623)
Q Consensus 254 ~DTvG~~~P~~v~~ 267 (623)
. +.+.-+++.+
T Consensus 408 G---ap~rsER~aK 418 (452)
T 3otr_A 408 G---SPCRSERLCK 418 (452)
T ss_dssp C---CSCSHHHHHH
T ss_pred C---CCcchhHHHH
Confidence 2 2233455544
No 445
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=62.04 E-value=1.1e+02 Score=30.35 Aligned_cols=202 Identities=11% Similarity=0.033 Sum_probs=104.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCCh-hHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~-~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 175 (623)
.|-.+-...+-+.+.+.|++.+-... ..++ .+.+.++.+...-+ .++ .|.... ....+....++.+...
T Consensus 18 ~~~~~~~~gi~~~a~~~g~~l~~~~~-~~~~~~~~~~i~~l~~~~~-~vd-------giIi~~-~~~~~~~~~~~~~~~~ 87 (332)
T 2rjo_A 18 PYYTAFNKGAQSFAKSVGLPYVPLTT-EGSSEKGIADIRALLQKTG-GNL-------VLNVDP-NDSADARVIVEACSKA 87 (332)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEC-TTCHHHHHHHHHHHHHHTT-TCE-------EEEECC-SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEecC-CCCHHHHHHHHHHHHHCCC-CCC-------EEEEeC-CCHHHHHHHHHHHHHC
Confidence 34456666777788889998765432 2223 23455665554310 011 122211 2223333334444445
Q ss_pred CCCEEEEEecCCHH-------HHHHHhCCCHHHHHHHHHHHHHHHHH--cCCCeEEE-cccCCCCCCHHHHHHHHHHHHH
Q 006969 176 KRPRIHTFIATSGI-------HMEHKLRKTKQQVVEIARSMVKFARS--LGCDDVEF-SPEDAGRSDRKFLYEILGEVIK 245 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~-------h~~~~l~~t~ee~l~~~~~~v~~ak~--~G~~~V~f-~~eda~r~d~e~l~~~~~~~~~ 245 (623)
+++.|.+-....+. ........+. .+....+++++.+ .|...|.| ..........+.+.-+.+++.+
T Consensus 88 ~iPvV~~~~~~~~~~~~~~~~~~~~~V~~D~---~~~g~~a~~~L~~~~~G~~~I~~i~g~~~~~~~~~R~~Gf~~al~~ 164 (332)
T 2rjo_A 88 GAYVTTIWNKPKDLHPWDYNPNYVAHLSYDG---VAYGEETATQLFKSMGGKGGVVALGGIFSNVPAIERKAGLDAALKK 164 (332)
T ss_dssp TCEEEEESCCCTTCCGGGGTTTEEEEEECCH---HHHHHHHHHHHHHHTTTCEEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCeEEEECCCCCcccchhcccceeEEEccCh---HHHHHHHHHHHHHHcCCCCeEEEEECCCCCccHHHHHHHHHHHHHh
Confidence 78876553322110 0001123333 3455667788777 68765655 3221222234555566677777
Q ss_pred c-CCcEEeecCcccccCHHHHHHHHHHHHHh-CCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccC
Q 006969 246 V-GATTLNIPDTVGITMPTEFGKLIADIKAN-TPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGE 319 (623)
Q Consensus 246 a-Ga~~I~l~DTvG~~~P~~v~~li~~l~~~-~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGE 319 (623)
. |.....+ -.+-..+....+.+..+.+. .|. +=.+=|.||. +|+.-..++-++|-+ =|.+|.|++.
T Consensus 165 ~pgi~~~~~--~~~~~~~~~~~~~~~~ll~~~~~~----~~aI~~~nd~-~A~g~~~al~~~G~~-~di~vvg~D~ 232 (332)
T 2rjo_A 165 FPGIQLLDF--QVADWNSQKAFPIMQAWMTRFNSK----IKGVWAANDD-MALGAIEALRAEGLA-GQIPVTGMDG 232 (332)
T ss_dssp CTTEEEEEE--EECTTCHHHHHHHHHHHHHHHGGG----EEEEEESSHH-HHHHHHHHHHHTTCB-TTBCEECSBC
T ss_pred CCCcEEEee--ccCCCCHHHHHHHHHHHHHhcCCC----eeEEEECCCc-hHHHHHHHHHHcCCC-CCCEEEeecC
Confidence 7 7543322 12334666667777666554 443 2355688874 666655555667876 5678888753
No 446
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=62.02 E-value=18 Score=37.54 Aligned_cols=97 Identities=16% Similarity=0.177 Sum_probs=61.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecc-cchhhHHHHHHHHhcC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYA 175 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~~a 175 (623)
.++.++ +++++.|.+.|++.||=-+| +.+++..+++.+..+ +|. ++=.+ ....+++..++. .
T Consensus 193 ~~~~~~-~~~~~~l~~~~i~~iE~P~~---~~~~~~~~~l~~~~~---------ipI-a~dE~~~~~~~~~~~i~~---~ 255 (368)
T 1sjd_A 193 AYTLGD-APQLARLDPFGLLLIEQPLE---EEDVLGHAELARRIQ---------TPI-CLDESIVSARAAADAIKL---G 255 (368)
T ss_dssp CCCGGG-HHHHHTTGGGCCSEEECCSC---TTCHHHHHHHHTTCS---------SCE-EESTTCCSHHHHHHHHHT---T
T ss_pred CCCHHH-HHHHHHHHhcCCCeEeCCCC---hhhHHHHHHHHHhCC---------CCE-EECCCcCCHHHHHHHHHc---C
Confidence 468889 99999999999999996544 456777777776431 132 22222 245566655543 3
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~ 224 (623)
..+.|.+ +.+ + ---+..+.++++.|+++|+. +..+
T Consensus 256 ~~d~v~i--k~~---------~--~GGit~~~~i~~~A~~~g~~-~~~~ 290 (368)
T 1sjd_A 256 AVQIVNI--KPG---------R--VGGYLEARRVHDVCAAHGIP-VWCG 290 (368)
T ss_dssp CCSEEEE--CTT---------T--TTSHHHHHHHHHHHHHTTCC-EEEC
T ss_pred CCCEEEe--ccc---------c--cCCHHHHHHHHHHHHHcCCc-EEeC
Confidence 4566554 211 1 12255677889999999987 4343
No 447
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=61.74 E-value=21 Score=34.91 Aligned_cols=68 Identities=15% Similarity=0.128 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 231 SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
.+++...++++++.+.|++.|-+.=+ +|. -.+.|+.+++.+|+ ..|+.-.=-| ...+..|+++||+.|
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~----t~~-a~~~I~~l~~~~p~---~~IGAGTVlt----~~~a~~ai~AGA~fi 89 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLR----TEA-GLAAISAIKKAVPE---AIVGAGTVCT----ADDFQKAIDAGAQFI 89 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETT----STT-HHHHHHHHHHHCTT---SEEEEECCCS----HHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC----Ccc-HHHHHHHHHHHCCC---CeEeeccccC----HHHHHHHHHcCCCEE
Confidence 45688999999999999999988422 343 45788899999985 6788754433 667789999999998
No 448
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=61.58 E-value=72 Score=33.08 Aligned_cols=142 Identities=13% Similarity=0.143 Sum_probs=71.6
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEec----CCC-C----hhHHHHHHHHHHHhccccccCCCccceEEe------------e
Q 006969 99 TSKEKLDIARQLAKLGVDIIEAGF----PAA-S----KEDFEAVRTIAKEVGNAVDAESGYVPVICG------------L 157 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gvd~IEvGf----P~~-s----~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~------------~ 157 (623)
+.+++++.+ .++|++.||+.. |.. . +.+.+.++.+.+..+-.+ ..+.. +
T Consensus 34 ~~~e~l~~a---a~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i-------~~~~~~~~~~p~~~~g~l 103 (386)
T 1muw_A 34 DPVETVQRL---AELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTV-------PMATTNLFTHPVFKDGGF 103 (386)
T ss_dssp CHHHHHHHH---HHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBC-------CEEECCCSSSGGGTTCST
T ss_pred CHHHHHHHH---HHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeE-------EEEecccccccccccCCC
Confidence 466665555 456999999975 432 1 234555665555433221 11211 1
Q ss_pred cccch-------hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCH----HHHHHHHHHHHHHHHHcC--CCeEEEc
Q 006969 158 SRCNE-------RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTK----QQVVEIARSMVKFARSLG--CDDVEFS 224 (623)
Q Consensus 158 ~r~~~-------~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~----ee~l~~~~~~v~~ak~~G--~~~V~f~ 224 (623)
+...+ +.++++++..+..|.+.|.+....... .+....+. +...+.+.++.++|++.| +. +.+-
T Consensus 104 ~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~~g~~~~--~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~-l~lE 180 (386)
T 1muw_A 104 TANDRDVRRYALRKTIRNIDLAVELGAKTYVAWGGREGA--ESGAAKDVRVALDRMKEAFDLLGEYVTSQGYDIR-FAIE 180 (386)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEE--SSTTSCCHHHHHHHHHHHHHHHHHHHHHHTCCCE-EEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCcc--cccccCCHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEEe
Confidence 21111 234455555556688888764332100 00001233 445666677788889999 53 5443
Q ss_pred ccCC------CCCCHHHHHHHHHHHHHcCCc-EEe-ecCc
Q 006969 225 PEDA------GRSDRKFLYEILGEVIKVGAT-TLN-IPDT 256 (623)
Q Consensus 225 ~eda------~r~d~e~l~~~~~~~~~aGa~-~I~-l~DT 256 (623)
+... .-.+++.+.++++. .+-. .+. ..||
T Consensus 181 ~~~~e~~~~~~~~t~~~~~~li~~---v~~pn~vgl~lD~ 217 (386)
T 1muw_A 181 PKPNEPRGDILLPTVGHALAFIER---LERPELYGVNPEV 217 (386)
T ss_dssp CCSSSSSSEESSCSHHHHHHHHTT---SSSGGGEEECCBH
T ss_pred eCCCCCcccccCCCHHHHHHHHHH---hCCccceEEEeec
Confidence 3211 22467777776653 3543 233 3477
No 449
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=61.57 E-value=13 Score=39.80 Aligned_cols=144 Identities=10% Similarity=0.036 Sum_probs=83.3
Q ss_pred HhcCCCCEEEEEecC--------CH--HHHHHHhCCCH-HHHHHHHHHHHHHHHHc-----CCC---eEEEcccCCC---
Q 006969 172 VKYAKRPRIHTFIAT--------SG--IHMEHKLRKTK-QQVVEIARSMVKFARSL-----GCD---DVEFSPEDAG--- 229 (623)
Q Consensus 172 l~~a~~~~v~i~~~~--------Sd--~h~~~~l~~t~-ee~l~~~~~~v~~ak~~-----G~~---~V~f~~eda~--- 229 (623)
.+.+|.+.|.|-.+- |+ .++...+|-|. +.-.+.+.+.|+.+|+. |.+ .|.+++++..
T Consensus 179 A~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~ 258 (419)
T 3l5a_A 179 AIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSD 258 (419)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTE
T ss_pred HHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCC
Confidence 456899999987764 33 23334466666 66666666676666653 322 2566886422
Q ss_pred -CCCHHHHHHHHHHHHH-cCCcEEeecCccc----cc---CHH-HHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHH
Q 006969 230 -RSDRKFLYEILGEVIK-VGATTLNIPDTVG----IT---MPT-EFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 299 (623)
Q Consensus 230 -r~d~e~l~~~~~~~~~-aGa~~I~l~DTvG----~~---~P~-~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANs 299 (623)
-.+.+...++++.+.+ +|++.|.+..... +. .|. .-..+++.+++.+++ ++||..=.-- .-...+
T Consensus 259 ~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~--~iPVI~~GgI---~t~e~A 333 (419)
T 3l5a_A 259 LGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAG--RIPLIASGGI---NSPESA 333 (419)
T ss_dssp EEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTT--SSCEEECSSC---CSHHHH
T ss_pred CCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCC--CCeEEEECCC---CCHHHH
Confidence 2357888899999999 9999999876432 11 111 112466677776642 2444432210 124455
Q ss_pred HHHHHhCCCEEEeccCCccCc-cCcccH
Q 006969 300 IAGACAGARQVEVTINGIGER-AGNASL 326 (623)
Q Consensus 300 laAv~aGA~~Vd~Tv~GlGER-aGNa~l 326 (623)
..+++. ||.| ++|.. -.|+.+
T Consensus 334 e~~L~~-aDlV-----aiGR~~IanPdl 355 (419)
T 3l5a_A 334 LDALQH-ADMV-----GMSSPFVTEPDF 355 (419)
T ss_dssp HHHGGG-CSEE-----EESTHHHHCTTH
T ss_pred HHHHHh-CCcH-----HHHHHHHHCcHH
Confidence 667776 6654 55542 145544
No 450
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=61.53 E-value=20 Score=34.98 Aligned_cols=86 Identities=14% Similarity=0.090 Sum_probs=59.4
Q ss_pred HHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEe
Q 006969 208 SMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTH 287 (623)
Q Consensus 208 ~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H 287 (623)
+..+..++.++- ..+-. .+++.+.++++++.+.|++.|-+... +|. ..+.++.+++.+|+ +.++..
T Consensus 18 ~~~~~l~~~~ii-~V~r~-----~~~~~~~~~~~al~~gGv~~iel~~k----~~~-~~~~i~~l~~~~~~---~~igag 83 (225)
T 1mxs_A 18 RIDAICEKARIL-PVITI-----AREEDILPLADALAAGGIRTLEVTLR----SQH-GLKAIQVLREQRPE---LCVGAG 83 (225)
T ss_dssp HHHHHHHHHSEE-EEECC-----SCGGGHHHHHHHHHHTTCCEEEEESS----STH-HHHHHHHHHHHCTT---SEEEEE
T ss_pred HHHHHHHHCCEE-EEEeC-----CCHHHHHHHHHHHHHCCCCEEEEecC----Ccc-HHHHHHHHHHhCcc---cEEeeC
Confidence 344556667652 22222 35567889999999999999998754 343 45678888888874 556554
Q ss_pred ecCCcchHHHHHHHHHHhCCCEEE
Q 006969 288 CQNDLGLSTANTIAGACAGARQVE 311 (623)
Q Consensus 288 ~HND~GlAvANslaAv~aGA~~Vd 311 (623)
. . +=.-....|+++||+.|+
T Consensus 84 t---v-l~~d~~~~A~~aGAd~v~ 103 (225)
T 1mxs_A 84 T---V-LDRSMFAAVEAAGAQFVV 103 (225)
T ss_dssp C---C-CSHHHHHHHHHHTCSSEE
T ss_pred e---E-eeHHHHHHHHHCCCCEEE
Confidence 3 2 223677899999999997
No 451
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=61.42 E-value=1.3e+02 Score=29.56 Aligned_cols=112 Identities=13% Similarity=0.066 Sum_probs=0.0
Q ss_pred ccchhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhC---------CCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC
Q 006969 159 RCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLR---------KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (623)
Q Consensus 159 r~~~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~---------~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~ 229 (623)
+....++...++.+..+|+..|.+ +.=+ ++.++.++.+.++.+.+++.|.. +.++-.
T Consensus 39 ~~~~~~~~~~~~~al~~Gv~~vql----------R~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~-liInd~--- 104 (243)
T 3o63_A 39 RRERGDLAQFAEAALAGGVDIIQL----------RDKGSPGELRFGPLQARDELAACEILADAAHRYGAL-FAVNDR--- 104 (243)
T ss_dssp CTTTCCHHHHHHHHHHTTCSEEEE----------CCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCE-EEEESC---
T ss_pred CcccchHHHHHHHHHHCCCCEEEE----------ccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCE-EEEeCH---
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE
Q 006969 230 RSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 309 (623)
Q Consensus 230 r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 309 (623)
.+.+.++|||.|-|...--- +..+|+.++. +..|++=||+ ..-+..|.+.||++
T Consensus 105 ----------~~lA~~~gAdGVHLg~~dl~---------~~~~r~~~~~--~~~iG~S~ht-----~~Ea~~A~~~GaDy 158 (243)
T 3o63_A 105 ----------ADIARAAGADVLHLGQRDLP---------VNVARQILAP--DTLIGRSTHD-----PDQVAAAAAGDADY 158 (243)
T ss_dssp ----------HHHHHHHTCSEEEECTTSSC---------HHHHHHHSCT--TCEEEEEECS-----HHHHHHHHHSSCSE
T ss_pred ----------HHHHHHhCCCEEEecCCcCC---------HHHHHHhhCC--CCEEEEeCCC-----HHHHHHHhhCCCCE
Q ss_pred E
Q 006969 310 V 310 (623)
Q Consensus 310 V 310 (623)
|
T Consensus 159 I 159 (243)
T 3o63_A 159 F 159 (243)
T ss_dssp E
T ss_pred E
No 452
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=61.29 E-value=38 Score=34.37 Aligned_cols=102 Identities=16% Similarity=0.109 Sum_probs=73.1
Q ss_pred HHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCc-EEeecC-cccccCHHHHHHHHHHHHHhCCCCcceeE
Q 006969 207 RSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGAT-TLNIPD-TVGITMPTEFGKLIADIKANTPGIENVVI 284 (623)
Q Consensus 207 ~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~-~I~l~D-TvG~~~P~~v~~li~~l~~~~~~~~~v~i 284 (623)
+++.+.|++.|+-.-.|+. .+.+.+..+++++.+.+.. +|.+.- +..++-...+..++..+.++.+ +|+
T Consensus 7 ~~ll~~A~~~~yAv~AfNv-----~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~----VPV 77 (286)
T 1gvf_A 7 KYLLQDAQANGYAVPAFNI-----HNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYN----MPL 77 (286)
T ss_dssp HHHHHHHHHHTCCEEEEEC-----CSHHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTT----SCB
T ss_pred HHHHHHHHHCCCEEEEEee-----CCHHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCC----CcE
Confidence 4678889999886335665 5779999999999999865 444432 2334445778888888887763 677
Q ss_pred EEeecCCcchHHHHHHHHHHhCCCE--EEeccCCccC
Q 006969 285 STHCQNDLGLSTANTIAGACAGARQ--VEVTINGIGE 319 (623)
Q Consensus 285 ~~H~HND~GlAvANslaAv~aGA~~--Vd~Tv~GlGE 319 (623)
.+|. |-|....-...|+++|.+- +|+|-..+-|
T Consensus 78 alHl--DHg~~~e~i~~ai~~GFtSVMiDgS~lp~ee 112 (286)
T 1gvf_A 78 ALHL--DHHESLDDIRRKVHAGVRSAMIDGSHFPFAE 112 (286)
T ss_dssp EEEE--EEECCHHHHHHHHHTTCCEEEECCTTSCHHH
T ss_pred EEEc--CCCCCHHHHHHHHHcCCCeEEECCCCCCHHH
Confidence 7665 4444578889999999976 6888665533
No 453
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=61.28 E-value=1.2e+02 Score=29.73 Aligned_cols=123 Identities=12% Similarity=0.137 Sum_probs=66.4
Q ss_pred hHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE-ccc--CCCCCC--------
Q 006969 164 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPE--DAGRSD-------- 232 (623)
Q Consensus 164 dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f-~~e--da~r~d-------- 232 (623)
+++.+++.++..|.+.|.++........ ....+ + +.+.+..+.++++|+..+.. .|. +-...+
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~--~~~~~-~---~~~~~~~~~l~~~gl~~~~~h~~~~~nl~s~d~~~~r~~~ 92 (303)
T 3aal_A 19 MLLAASEEAASYGANTFMIYTGAPQNTK--RKSIE-E---LNIEAGRQHMQAHGIEEIVVHAPYIINIGNTTNLDTFSLG 92 (303)
T ss_dssp THHHHHHHHHHTTCSEEEEESSCTTCCC--CCCSG-G---GCHHHHHHHHHHTTCCEEEEECCTTCCTTCSSCHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEcCCCCCccC--CCCCC-H---HHHHHHHHHHHHcCCceEEEeccccccCCCCCcHHHHHHH
Confidence 5667777777789998888643211000 00011 1 12334556677788743333 331 111123
Q ss_pred HHHHHHHHHHHHHcCCcEEeec-Ccc-cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCc
Q 006969 233 RKFLYEILGEVIKVGATTLNIP-DTV-GITMPTEFGKLIADIKANTPGIENVVISTHCQNDL 292 (623)
Q Consensus 233 ~e~l~~~~~~~~~aGa~~I~l~-DTv-G~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~ 292 (623)
.+++.+.++.+.+.|+..|.+. -.. +......+..+++.+++......++.|.++.|++.
T Consensus 93 ~~~~~~~i~~A~~lGa~~vv~h~g~~~~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn~~~~ 154 (303)
T 3aal_A 93 VDFLRAEIERTEAIGAKQLVLHPGAHVGAGVEAGLRQIIRGLNEVLTREQNVQIALETMAGK 154 (303)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCEECTTSCHHHHHHHHHHHHHHHCCSSCSCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 4567777788888899888762 111 11223445566666666543223578888888743
No 454
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=61.14 E-value=71 Score=32.87 Aligned_cols=59 Identities=7% Similarity=0.094 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcC--C-cEEeecCcccccCHH
Q 006969 204 EIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG--A-TTLNIPDTVGITMPT 263 (623)
Q Consensus 204 ~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aG--a-~~I~l~DTvG~~~P~ 263 (623)
+.+.+.++.+.+.|.+.|.++= ..+...|..+.++++++.+.= . -.+-.=||.|.++..
T Consensus 169 ~~~~~~~~~~~~~Ga~~i~l~D-T~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN 230 (337)
T 3ble_A 169 DYVKSLVEHLSKEHIERIFLPD-TLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVAN 230 (337)
T ss_dssp HHHHHHHHHHHTSCCSEEEEEC-TTCCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEec-CCCCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHH
Confidence 4445566667777876554432 255677787778777776542 1 123344788876554
No 455
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=61.06 E-value=29 Score=33.49 Aligned_cols=183 Identities=16% Similarity=0.142 Sum_probs=92.1
Q ss_pred HHHHHHHHHHhHcCCCEEEEecCC----CChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 101 KEKLDIARQLAKLGVDIIEAGFPA----ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 101 e~Kl~Ia~~L~~~Gvd~IEvGfP~----~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
.+-+++++.+.+.|++.|++--+. .....++.++.++ ... .|.+.+=.-...++++.+++ +|
T Consensus 30 ~~~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~-~~~---------ipvi~~Ggi~~~~~~~~~~~----~G 95 (241)
T 1qo2_A 30 KDPVELVEKLIEEGFTLIHVVDLSNAIENSGENLPVLEKLS-EFA---------EHIQIGGGIRSLDYAEKLRK----LG 95 (241)
T ss_dssp SCHHHHHHHHHHTTCCCEEEEEHHHHHHCCCTTHHHHHHGG-GGG---------GGEEEESSCCSHHHHHHHHH----TT
T ss_pred cCHHHHHHHHHHcCCCEEEEecccccccCCchhHHHHHHHH-hcC---------CcEEEECCCCCHHHHHHHHH----CC
Confidence 356889999999999999984221 1223456666665 321 24333222224566766655 48
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE--ccc------CC----CCCCHHHHHHHHHHHH
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF--SPE------DA----GRSDRKFLYEILGEVI 244 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f--~~e------da----~r~d~e~l~~~~~~~~ 244 (623)
++.|++-.. . ++.- +.++.++..| ..+.+ ++- .+ +..+ ..++++.+.
T Consensus 96 ad~V~lg~~--~--------------l~~p-~~~~~~~~~g-~~i~~~~d~~~~~v~~~g~~~~~~~~---~~e~~~~~~ 154 (241)
T 1qo2_A 96 YRRQIVSSK--V--------------LEDP-SFLKSLREID-VEPVFSLDTRGGRVAFKGWLAEEEID---PVSLLKRLK 154 (241)
T ss_dssp CCEEEECHH--H--------------HHCT-THHHHHHTTT-CEEEEEEEEETTEECCTTCSSCSCCC---HHHHHHHHH
T ss_pred CCEEEECch--H--------------hhCh-HHHHHHHHcC-CcEEEEEEecCCEEEECCceecCCCC---HHHHHHHHH
Confidence 888865221 1 1100 1122224455 33322 220 11 1123 345566777
Q ss_pred HcCCcEEeecCc--ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH-HHHHHHHHh-----C-CCEEEeccC
Q 006969 245 KVGATTLNIPDT--VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST-ANTIAGACA-----G-ARQVEVTIN 315 (623)
Q Consensus 245 ~aGa~~I~l~DT--vG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv-ANslaAv~a-----G-A~~Vd~Tv~ 315 (623)
++|++.|.+-++ .|...... .++++.+++.++ +|+-.= .|... .+.....+. | |+.| +.
T Consensus 155 ~~G~~~i~~t~~~~~g~~~g~~-~~~i~~l~~~~~----iPvia~----GGI~~~~d~~~~~~~~~~~~G~adgv---~v 222 (241)
T 1qo2_A 155 EYGLEEIVHTEIEKDGTLQEHD-FSLTKKIAIEAE----VKVLAA----GGISSENSLKTAQKVHTETNGLLKGV---IV 222 (241)
T ss_dssp TTTCCEEEEEETTHHHHTCCCC-HHHHHHHHHHHT----CEEEEE----SSCCSHHHHHHHHHHHHHTTTSEEEE---EE
T ss_pred hCCCCEEEEEeecccccCCcCC-HHHHHHHHHhcC----CcEEEE----CCCCCHHHHHHHHhcccccCCeEeEE---Ee
Confidence 899999988663 24322111 355666666542 334321 45553 566666666 7 6543 43
Q ss_pred CccCccCcccHHHHH
Q 006969 316 GIGERAGNASLEEVV 330 (623)
Q Consensus 316 GlGERaGNa~lEevv 330 (623)
|=+==.|..+++++.
T Consensus 223 gsal~~~~~~~~~~~ 237 (241)
T 1qo2_A 223 GRAFLEGILTVEVMK 237 (241)
T ss_dssp CHHHHTTSSCHHHHH
T ss_pred eHHHHcCCCCHHHHH
Confidence 322222444555544
No 456
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=61.03 E-value=13 Score=35.99 Aligned_cols=69 Identities=14% Similarity=0.084 Sum_probs=47.1
Q ss_pred HHHHHHHHHHcCCcEEeecCcccccCHH-HHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 236 LYEILGEVIKVGATTLNIPDTVGITMPT-EFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 236 l~~~~~~~~~aGa~~I~l~DTvG~~~P~-~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
..++++.+.++|++.|.+-|-.|...|. .. ++++.+++.+. +|+.+|.--.. ......++++||+.|..
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~----ipv~v~ggi~~---~~~~~~~l~~Gad~V~l 102 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLD----VQVELSGGIRD---DESLAAALATGCARVNV 102 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCS----SEEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcC----CcEEEECCCCC---HHHHHHHHHcCCCEEEE
Confidence 3467778888999999998755543332 13 88888988763 67777643321 23467778899998854
No 457
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=60.76 E-value=26 Score=35.20 Aligned_cols=28 Identities=29% Similarity=0.446 Sum_probs=15.8
Q ss_pred HHHHHHHHcCCC--CCHHHHHHHHHHHHHH
Q 006969 426 ALKDRLKELGYE--LNDEQLGTIFWHFKAV 453 (623)
Q Consensus 426 ~i~~~l~~lG~~--l~~~~~~~~~~~iK~l 453 (623)
.+...|+++|++ ++-+.+.++.+.+.++
T Consensus 252 ~lv~~l~~~g~~~~id~~~l~~~~~~~~~~ 281 (295)
T 1ydn_A 252 AVVEMLHEMGFETGLDLDRLRSAGLFTQAL 281 (295)
T ss_dssp HHHHHHHHTTCBCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCcCHHHHHHHHHHHHHH
Confidence 455566667765 4555555555555443
No 458
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=60.71 E-value=54 Score=31.66 Aligned_cols=198 Identities=8% Similarity=-0.012 Sum_probs=100.9
Q ss_pred CCCHHHHHHHHHHHhHc-CCCEEEE--ecCCCChhH-HHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHH
Q 006969 97 TLTSKEKLDIARQLAKL-GVDIIEA--GFPAASKED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAV 172 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~-Gvd~IEv--GfP~~s~~d-~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal 172 (623)
.|-.+-...+-+.+.+. |.+.+=. .+....++. .+.++.+... .++ .|..+ .......+..++.+
T Consensus 22 ~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~---~vd-------giii~-~~~~~~~~~~~~~~ 90 (304)
T 3gbv_A 22 EYWTDVQKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEE---QPD-------GVMFA-PTVPQYTKGFTDAL 90 (304)
T ss_dssp SHHHHHHHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTT---CCS-------EEEEC-CSSGGGTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhc---CCC-------EEEEC-CCChHHHHHHHHHH
Confidence 35566666777778877 7664433 233333332 3445544432 111 12111 12222333444445
Q ss_pred hcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCC--CeEEE-cc----cCCCCCCHHHHHHHHHHHHH
Q 006969 173 KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGC--DDVEF-SP----EDAGRSDRKFLYEILGEVIK 245 (623)
Q Consensus 173 ~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~--~~V~f-~~----eda~r~d~e~l~~~~~~~~~ 245 (623)
...+++.|.+-....+.........+ +.+....+++++.+.|. ..|.| .. ........+.+.-+.+++.+
T Consensus 91 ~~~~iPvV~~~~~~~~~~~~~~V~~D---~~~~g~~a~~~l~~~g~~~~~i~~i~~~~~g~~~~~~~~~R~~gf~~~l~~ 167 (304)
T 3gbv_A 91 NELGIPYIYIDSQIKDAPPLAFFGQN---SHQSGYFAARMLMLLAVNDREIVIFRKIHEGVIGSNQQESREIGFRQYMQE 167 (304)
T ss_dssp HHHTCCEEEESSCCTTSCCSEEEECC---HHHHHHHHHHHHHHHSTTCSEEEEEEEEBTTBCCCHHHHHHHHHHHHHHHH
T ss_pred HHCCCeEEEEeCCCCCCCceEEEecC---hHHHHHHHHHHHHHHhCCCCeEEEEEecccCCccchhHHHHHHHHHHHHHh
Confidence 55588887654332211000112233 34456677888888876 65654 21 11222334666667777888
Q ss_pred cCCc--EEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCcc
Q 006969 246 VGAT--TLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (623)
Q Consensus 246 aGa~--~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlG 318 (623)
.|.+ .+.+. .+...+....+.+..+.+..|+.+ .+=|.||..+++. .+.-+.|- =|.+|.|++
T Consensus 168 ~g~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d~a~g~~--~al~~~g~--~di~vig~d 232 (304)
T 3gbv_A 168 HHPACNILELN--LHADLNIEDSRMLDDFFREHPDVK----HGITFNSKVYIIG--EYLQQRRK--SDFSLIGYD 232 (304)
T ss_dssp HCTTSEEEEEE--EESSCSSCHHHHHHHHHHHCTTCC----EEEESSSCTHHHH--HHHHHTTC--CSCEEEEES
T ss_pred hCCCcEEEEee--ecCCCHHHHHHHHHHHHHhCCCeE----EEEEcCcchHHHH--HHHHHcCC--CCcEEEEeC
Confidence 8754 22221 223345555666666666555432 5568888744433 34446676 367777765
No 459
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=60.60 E-value=24 Score=37.52 Aligned_cols=97 Identities=8% Similarity=-0.012 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
+..++.++-+++++.|.++|++.||--+| +.|++..+++++...- |.+.+=.-....+++..++.
T Consensus 238 N~~~~~~~Ai~~~~~Le~~~i~~iEeP~~---~~d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~li~~--- 302 (412)
T 3stp_A 238 YMGWNLDYAKRMLPKLAPYEPRWLEEPVI---ADDVAGYAELNAMNIV---------PISGGEHEFSVIGCAELINR--- 302 (412)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEECCSC---TTCHHHHHHHHHTCSS---------CEEECTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEECCCC---cccHHHHHHHHhCCCC---------CEEeCCCCCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD 219 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~ 219 (623)
..++.| +++.++---+..+.+++..|+++|+.
T Consensus 303 ~a~D~v-------------~ik~~~~GGit~a~kia~~A~a~gi~ 334 (412)
T 3stp_A 303 KAVSVL-------------QYDTNRVGGITAAQKINAIAEAAQIP 334 (412)
T ss_dssp TCCSEE-------------CCCHHHHTHHHHHHHHHHHHHHHTCC
T ss_pred CCCCEE-------------ecChhhcCCHHHHHHHHHHHHHcCCE
No 460
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=60.22 E-value=27 Score=34.41 Aligned_cols=87 Identities=14% Similarity=0.115 Sum_probs=60.8
Q ss_pred HHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEe
Q 006969 208 SMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTH 287 (623)
Q Consensus 208 ~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H 287 (623)
+..+..++.++-. .+-. .+++...++++++.+.|++.|-+.-+ +|. -.+.|+.+++.+|+ +.++.-
T Consensus 26 ~~~~~l~~~~vv~-Vir~-----~~~~~a~~~a~al~~gGi~~iEvt~~----t~~-a~e~I~~l~~~~~~---~~iGaG 91 (232)
T 4e38_A 26 TINNQLKALKVIP-VIAI-----DNAEDIIPLGKVLAENGLPAAEITFR----SDA-AVEAIRLLRQAQPE---MLIGAG 91 (232)
T ss_dssp HHHHHHHHHCEEE-EECC-----SSGGGHHHHHHHHHHTTCCEEEEETT----STT-HHHHHHHHHHHCTT---CEEEEE
T ss_pred HHHHHHHhCCEEE-EEEc-----CCHHHHHHHHHHHHHCCCCEEEEeCC----CCC-HHHHHHHHHHhCCC---CEEeEC
Confidence 3455666666522 2222 34578999999999999999998544 343 35788889998874 567754
Q ss_pred ecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 288 CQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 288 ~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
. . +-..-+..|+++||+.|..
T Consensus 92 T---V-lt~~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 92 T---I-LNGEQALAAKEAGATFVVS 112 (232)
T ss_dssp C---C-CSHHHHHHHHHHTCSEEEC
T ss_pred C---c-CCHHHHHHHHHcCCCEEEe
Confidence 3 1 2366778999999999963
No 461
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=60.06 E-value=41 Score=34.83 Aligned_cols=79 Identities=18% Similarity=0.090 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeec----------Cccccc---CHHHHHHHHHHHHHhCCCCcceeEEE--ee-cCCcc-
Q 006969 231 SDRKFLYEILGEVIKVGATTLNIP----------DTVGIT---MPTEFGKLIADIKANTPGIENVVIST--HC-QNDLG- 293 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~aGa~~I~l~----------DTvG~~---~P~~v~~li~~l~~~~~~~~~v~i~~--H~-HND~G- 293 (623)
.+++.+.+.++.+.++|+|.|.|- |-.|.. .|..+.++|+.+++.+. +||.+ .. -++..
T Consensus 67 ~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~----~PV~vKiR~g~~~~~~ 142 (350)
T 3b0p_A 67 SDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVR----VPVTVKMRLGLEGKET 142 (350)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCS----SCEEEEEESCBTTCCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhC----CceEEEEecCcCcccc
Confidence 357778888888888888876553 444544 58889999999998773 45555 21 22221
Q ss_pred --hHHHHHHHHHHhCCCEEEec
Q 006969 294 --LSTANTIAGACAGARQVEVT 313 (623)
Q Consensus 294 --lAvANslaAv~aGA~~Vd~T 313 (623)
-.+.-+..+.++|++.|.++
T Consensus 143 ~~~~~~~a~~l~~aG~d~I~V~ 164 (350)
T 3b0p_A 143 YRGLAQSVEAMAEAGVKVFVVH 164 (350)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEe
Confidence 23445567778999999875
No 462
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=59.94 E-value=22 Score=36.65 Aligned_cols=70 Identities=20% Similarity=0.236 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHHHcCCcEEeecCccc-----------ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH
Q 006969 232 DRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 300 (623)
Q Consensus 232 d~e~l~~~~~~~~~aGa~~I~l~DTvG-----------~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANsl 300 (623)
.++.+.+.++...+.|++.|.+.-+-| ...|+++.++++..++. ++++.+|++.+. ...
T Consensus 170 ~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~-----g~~v~~H~~~~~-----~i~ 239 (423)
T 3feq_A 170 GVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAA-----NTYVMAHAYTGR-----AIA 239 (423)
T ss_dssp SHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHT-----TCCEEEEEEEHH-----HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHC-----CCeEEEEeCChH-----HHH
Confidence 456666777777777776665543211 56788999999998875 256899998542 356
Q ss_pred HHHHhCCCEEE
Q 006969 301 AGACAGARQVE 311 (623)
Q Consensus 301 aAv~aGA~~Vd 311 (623)
.++++|++.|+
T Consensus 240 ~~l~~g~~~i~ 250 (423)
T 3feq_A 240 RAVRCGVRTIE 250 (423)
T ss_dssp HHHHHTCCEEE
T ss_pred HHHHcCCCEEe
Confidence 67788998874
No 463
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=59.89 E-value=20 Score=37.19 Aligned_cols=98 Identities=16% Similarity=0.190 Sum_probs=61.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~ 176 (623)
.++.++ +++++.|.+.|+++||=-+| +.|++..+++.+..+ +|...+=.-....+++..++. ..
T Consensus 192 ~~~~~~-~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------ipIa~dE~~~~~~~~~~~i~~---~~ 255 (369)
T 2zc8_A 192 AYSLAN-LAQLKRLDELRLDYIEQPLA---YDDLLDHAKLQRELS---------TPICLDESLTGAEKARKAIEL---GA 255 (369)
T ss_dssp CCCGGG-HHHHHGGGGGCCSCEECCSC---TTCSHHHHHHHHHCS---------SCEEESTTCCSHHHHHHHHHH---TC
T ss_pred CCCHHH-HHHHHHHHhCCCcEEECCCC---cccHHHHHHHHhhCC---------CCEEEcCccCCHHHHHHHHHh---CC
Confidence 467888 99999999999999996544 456777777777532 132222111245677766654 23
Q ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 006969 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (623)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~ 224 (623)
.+.|.+ ..+ +. --+..+.++++.|+++|+. +..+
T Consensus 256 ~d~v~i--k~~------~~-----GGit~~~~i~~~A~~~g~~-~~~~ 289 (369)
T 2zc8_A 256 GRVFNV--KPA------RL-----GGHGESLRVHALAESAGIP-LWMG 289 (369)
T ss_dssp CSEEEE--CHH------HH-----TSHHHHHHHHHHHHHTTCC-EEEC
T ss_pred CCEEEE--chh------hh-----CCHHHHHHHHHHHHHcCCc-EEec
Confidence 555544 110 11 1256677899999999987 4343
No 464
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=59.68 E-value=28 Score=35.46 Aligned_cols=52 Identities=17% Similarity=0.223 Sum_probs=35.2
Q ss_pred CCCcccCCCCCC-----CCC-HHHHHHHHHHHhHcCCCEEEEecCCCChhHH-HHHHHH
Q 006969 85 TTLRDGEQSPGA-----TLT-SKEKLDIARQLAKLGVDIIEAGFPAASKEDF-EAVRTI 136 (623)
Q Consensus 85 tTLRDG~Q~~g~-----~~t-~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~-e~v~~i 136 (623)
.||.+|.+.|-+ .++ .++-.++++...++|++.|....-.-+++.. ++++..
T Consensus 43 ~TLn~G~~ip~lGlGt~~~~d~~e~~~~v~~Al~~Gi~~~DTA~~YgnE~~vG~~l~~~ 101 (314)
T 3b3d_A 43 ATLHNGVEMPWFGLGVFQVEEGSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREG 101 (314)
T ss_dssp EECTTSCEEESBCEECCSCCCSHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHH
T ss_pred EECCCcCcccceeEECCCCCCHHHHHHHHHHHHHcCCCEEECccccCChHHHHHHHHHH
Confidence 589999987733 333 4677888888889999999997543343322 444443
No 465
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=59.65 E-value=94 Score=33.50 Aligned_cols=129 Identities=16% Similarity=0.203 Sum_probs=70.8
Q ss_pred HHHHHHHHHhHcCCCEEEEecC-CCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCCEE
Q 006969 102 EKLDIARQLAKLGVDIIEAGFP-AASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRI 180 (623)
Q Consensus 102 ~Kl~Ia~~L~~~Gvd~IEvGfP-~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v 180 (623)
+-.+.++.|.++|+|.|++.+- +..+..++.++.+.+..++ .|.+.++.. ..++.+.+. .+|++.|
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~--------~pvi~g~~~-t~e~a~~l~----~~G~d~I 303 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPD--------LPVVAGNVA-TPEGTEALI----KAGADAV 303 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTT--------SCEEEEEEC-SHHHHHHHH----HTTCSEE
T ss_pred hHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCC--------ceEEeCCcC-CHHHHHHHH----HcCCCEE
Confidence 3456788899999999999653 2234467888888876421 245555442 345554443 4599998
Q ss_pred EEEecCC---HHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeec
Q 006969 181 HTFIATS---GIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 254 (623)
Q Consensus 181 ~i~~~~S---d~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~ 254 (623)
.+....- ........+...- ..+.++.+.+++.++. |.. +++=.+++.+.+. ..+||+.+.+.
T Consensus 304 ~v~~~~G~~~~~~~~~~~g~p~~---~~l~~v~~~~~~~~ip-via---~GGI~~~~di~ka----la~GAd~V~iG 369 (494)
T 1vrd_A 304 KVGVGPGSICTTRVVAGVGVPQL---TAVMECSEVARKYDVP-IIA---DGGIRYSGDIVKA----LAAGAESVMVG 369 (494)
T ss_dssp EECSSCSTTCHHHHHHCCCCCHH---HHHHHHHHHHHTTTCC-EEE---ESCCCSHHHHHHH----HHTTCSEEEES
T ss_pred EEcCCCCccccccccCCCCccHH---HHHHHHHHHHhhcCCC-EEE---ECCcCCHHHHHHH----HHcCCCEEEEC
Confidence 8733211 0011111223332 3333444444544554 433 3455566655443 35798877754
No 466
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=59.60 E-value=46 Score=35.67 Aligned_cols=112 Identities=17% Similarity=0.216 Sum_probs=64.7
Q ss_pred HHHHHHhHcCCCEEEEecCCCChh------------H-HHHHHHHHHHhccccccCCCc-cceEEeecccchhhHHHHHH
Q 006969 105 DIARQLAKLGVDIIEAGFPAASKE------------D-FEAVRTIAKEVGNAVDAESGY-VPVICGLSRCNERDIKTAWE 170 (623)
Q Consensus 105 ~Ia~~L~~~Gvd~IEvGfP~~s~~------------d-~e~v~~i~~~~~~~~~~~~~l-~~~i~~~~r~~~~dI~~a~e 170 (623)
+.++.|.++|++.|++|.=+.+++ + .+.++.+.+. +-. .+ .-.|.|+---+.+++...++
T Consensus 154 e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~-G~~-----~v~~dlI~GlPget~e~~~~tl~ 227 (457)
T 1olt_A 154 DVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREI-GFT-----STNIDLIYGLPKQTPESFAFTLK 227 (457)
T ss_dssp HHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHT-TCC-----SCEEEEEESCTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHc-CCC-----cEEEEEEcCCCCCCHHHHHHHHH
Confidence 345667778888888885322222 2 2344444432 110 01 12355664456778887777
Q ss_pred HHhcCCCCEEEEEecC----CHHHHHH--HhC-CCHHHHHHHHHHHHHHHHHcCCCeEE
Q 006969 171 AVKYAKRPRIHTFIAT----SGIHMEH--KLR-KTKQQVVEIARSMVKFARSLGCDDVE 222 (623)
Q Consensus 171 al~~a~~~~v~i~~~~----Sd~h~~~--~l~-~t~ee~l~~~~~~v~~ak~~G~~~V~ 222 (623)
.+...+.+.|.+|.-+ ...+.+. ... -+.++.+++...+.+.+.+.|+..++
T Consensus 228 ~~~~l~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy~~ye 286 (457)
T 1olt_A 228 RVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIG 286 (457)
T ss_dssp HHHHHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHhcCcCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 7777788888887322 2211110 111 25677888888888888888875433
No 467
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=59.55 E-value=37 Score=35.70 Aligned_cols=95 Identities=11% Similarity=0.138 Sum_probs=61.2
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecc-cchhhHHHHHHHHhc
Q 006969 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKY 174 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~~ 174 (623)
..++.++-+++++.|.+.|++.||-.+| +.|++..+++.+... +|. ++=.+ ....+++..++.
T Consensus 229 ~~~~~~~ai~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------iPI-a~dE~~~~~~~~~~~i~~--- 292 (398)
T 2pp0_A 229 QQWDRETAIRMGRKMEQFNLIWIEEPLD---AYDIEGHAQLAAALD---------TPI-ATGEMLTSFREHEQLILG--- 292 (398)
T ss_dssp TCSCHHHHHHHHHHHGGGTCSCEECCSC---TTCHHHHHHHHHHCS---------SCE-EECTTCCSHHHHHHHHHT---
T ss_pred CCCCHHHHHHHHHHHHHcCCceeeCCCC---hhhHHHHHHHHhhCC---------CCE-EecCCcCCHHHHHHHHHc---
Confidence 3468999999999999999999997654 456778888877542 132 22222 245566655543
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD 219 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~ 219 (623)
...+.|.+ +. .+---+..+.++++.|+++|+.
T Consensus 293 ~~~d~v~i--k~-----------~~~GGite~~~i~~~A~~~gi~ 324 (398)
T 2pp0_A 293 NASDFVQP--DA-----------PRVGGISPFLKIMDLAAKHGRK 324 (398)
T ss_dssp TCCSEECC--CH-----------HHHTSHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEe--Cc-----------cccCCHHHHHHHHHHHHHcCCe
Confidence 23455432 11 1111256677899999999985
No 468
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=59.54 E-value=34 Score=32.62 Aligned_cols=70 Identities=17% Similarity=0.112 Sum_probs=37.5
Q ss_pred HHHHHHHHHHcCCcEEeecCccccc-CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 236 LYEILGEVIKVGATTLNIPDTVGIT-MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 236 l~~~~~~~~~aGa~~I~l~DTvG~~-~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
..++++.+.++|++.|.+.|..+.. ......++++.+++.+. +|+.+|.--. -...+..++++||+.|..
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~----ipvi~~g~i~---~~~~~~~~~~~Gad~V~i 105 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVS----IPVLVGGGVR---SLEDATTLFRAGADKVSV 105 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCS----SCEEEESSCC---SHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcC----CCEEEECCCC---CHHHHHHHHHcCCCEEEE
Confidence 4456666667777766666554432 11234456666666652 4455443111 123345666677777764
No 469
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=59.51 E-value=43 Score=35.41 Aligned_cols=100 Identities=13% Similarity=0.200 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
+..++.++-+++++.|.++|+..||=-.| |++..+++++..+- |...+=.-....|++..++.
T Consensus 220 N~~w~~~~A~~~~~~l~~~~i~~iEqP~~-----d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~i~~--- 282 (398)
T 4dye_A 220 NAAWSVPDSVRAGIALEELDLEYLEDPCV-----GIEGMAQVKAKVRI---------PLCTNMCVVRFEDFAPAMRL--- 282 (398)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEECCSS-----HHHHHHHHHHHCCS---------CEEESSSCCSGGGHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHhhcCCCEEcCCCC-----CHHHHHHHHhhCCC---------CEEeCCcCCCHHHHHHHHHh---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ 225 (623)
..++.|.+ +.++---+..+.+++..|+++|+. +....
T Consensus 283 ~a~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~h~ 319 (398)
T 4dye_A 283 NAVDVIHG-------------DVYKWGGIAATKALAAHCETFGLG-MNLHS 319 (398)
T ss_dssp TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHHTCE-EEECC
T ss_pred CCCCEEEe-------------CccccCCHHHHHHHHHHHHHcCCe-EEEcC
No 470
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=59.41 E-value=61 Score=30.76 Aligned_cols=201 Identities=9% Similarity=0.039 Sum_probs=104.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCC-CCh-hHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPA-ASK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~-~s~-~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
.|-.+-...+-+.+.+.|++.+=..... .++ .+.+.++.+...- .++ + |.... .........++.+..
T Consensus 13 ~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~--~vd---g----ii~~~-~~~~~~~~~~~~~~~ 82 (276)
T 3ksm_A 13 AYWRQVYLGAQKAADEAGVTLLHRSTKDDGDIAGQIQILSYHLSQA--PPD---A----LILAP-NSAEDLTPSVAQYRA 82 (276)
T ss_dssp THHHHHHHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHHS--CCS---E----EEECC-SSTTTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEECCCCCCCHHHHHHHHHHHHHhC--CCC---E----EEEeC-CCHHHHHHHHHHHHH
Confidence 4556667778888889998755432111 222 2345666665531 011 1 21111 112223334455556
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc----CCCeEEEc-ccCCCCCCHHHHHHHHHHHHHc-CC
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL----GCDDVEFS-PEDAGRSDRKFLYEILGEVIKV-GA 248 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~----G~~~V~f~-~eda~r~d~e~l~~~~~~~~~a-Ga 248 (623)
.+++.|.+-....+.........+ +.+....+++++.+. |...+.|- .........+.+.-+.+++.+. |.
T Consensus 83 ~~ipvV~~~~~~~~~~~~~~V~~d---~~~~g~~~~~~l~~~~~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~ 159 (276)
T 3ksm_A 83 RNIPVLVVDSDLAGDAHQGLVATD---NYAAGQLAARALLATLDLSKERNIALLRLRAGNASTDQREQGFLDVLRKHDKI 159 (276)
T ss_dssp TTCCEEEESSCCSSSCSSEEEECC---HHHHHHHHHHHHHHHSCTTSCEEEEECBCCTTCHHHHHHHHHHHHHHTTCTTE
T ss_pred CCCcEEEEecCCCCCCcceEEccC---HHHHHHHHHHHHHHhcCcCCCceEEEEEcCCCchhHHHHHHHHHHHHHhCCCc
Confidence 688887663322210000012233 335566778888887 87666652 2112223335555566666666 65
Q ss_pred cEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCcc
Q 006969 249 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (623)
Q Consensus 249 ~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlG 318 (623)
....+. .+-..+....+.+..+.+..|+.+ .+-|.||. +|..-..+.-++|. -=|.+|.|++
T Consensus 160 ~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d~-~a~g~~~al~~~g~-p~di~vig~d 221 (276)
T 3ksm_A 160 RIIAAP--YAGDDRGAARSEMLRLLKETPTID----GLFTPNES-TTIGALVAIRQSGM-SKQFGFIGFD 221 (276)
T ss_dssp EEEECC--BCCSSHHHHHHHHHHHHHHCSCCC----EEECCSHH-HHHHHHHHHHHTTC-TTSSEEEEES
T ss_pred EEEEEe--cCCCcHHHHHHHHHHHHHhCCCce----EEEECCch-hhhHHHHHHHHcCC-CCCeEEEEeC
Confidence 544322 344577777787777777666532 55577763 44444444456674 1256677765
No 471
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=59.32 E-value=24 Score=37.65 Aligned_cols=100 Identities=18% Similarity=0.201 Sum_probs=63.5
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcC
Q 006969 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 175 (623)
..++.++-+++++.|.++|++.||--.| +.+++..+++++... +|.+.+=.-....+++..++. .
T Consensus 235 ~~~~~~~A~~~~~~L~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~i~~---g 299 (424)
T 3v3w_A 235 HRLTPIEAARLGKALEPYHLFWMEDAVP---AENQESFKLIRQHTT---------TPLAVGEVFNSIHDCRELIQN---Q 299 (424)
T ss_dssp TCCCHHHHHHHHHHHGGGCCSEEECCSC---CSSTTHHHHHHHHCC---------SCEEECTTCCSGGGTHHHHHT---T
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEECCCC---hHhHHHHHHHHhhCC---------CCEEEccCcCCHHHHHHHHHc---C
Confidence 4579999999999999999999997554 345666777776532 233322111245667666553 2
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~ 224 (623)
.++.|.+ +.++---+..+.+++..|+++|+. +...
T Consensus 300 a~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~h 334 (424)
T 3v3w_A 300 WIDYIRT-------------TIVHAGGISQMRRIADFASLFHVR-TGFH 334 (424)
T ss_dssp CCSEECC-------------CTTTTTHHHHHHHHHHHHHTTTCE-EEEC
T ss_pred CCCeEee-------------cchhcCCHHHHHHHHHHHHHcCCE-EEec
Confidence 3455432 112223466677889999999985 5543
No 472
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=59.31 E-value=25 Score=37.76 Aligned_cols=147 Identities=18% Similarity=0.214 Sum_probs=86.9
Q ss_pred ccCCCC-CCCCCHHHHHHHHHH-HhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEe--ecccchhh
Q 006969 89 DGEQSP-GATLTSKEKLDIARQ-LAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG--LSRCNERD 164 (623)
Q Consensus 89 DG~Q~~-g~~~t~e~Kl~Ia~~-L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~--~~r~~~~d 164 (623)
+|.+.. +..++.++-+++++. |.+.++..||=.+| ++|++..+.+.+.++..+ .+++ +...+..+
T Consensus 253 ~g~Y~l~~~~~t~~eai~~~~~ll~~y~i~~IEdPl~---~dD~eg~~~L~~~~~~pI--------~ivGDel~vt~~~~ 321 (428)
T 3tqp_A 253 NGRYDFENNQLTSEEMIDRLTEWTKKYPVISIEDGLS---ENDWAGWKLLTERLENKV--------QLVGDDIFVTNPDI 321 (428)
T ss_dssp TTEECCSSSCBCHHHHHHHHHHHHHHSCEEEEECCSC---TTCHHHHHHHHHHHTTTS--------EEEESTTTTTCHHH
T ss_pred CCceeccccccCHHHHHHHHHHHHhhcccceEeCCCC---cccHHHHHHHHHhcCCCc--------ceeccccccCCHHH
Confidence 444333 346899999999997 89999999998765 567888888887653211 1222 12236677
Q ss_pred HHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHH
Q 006969 165 IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVI 244 (623)
Q Consensus 165 I~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~ 244 (623)
+...++. ...+.|.+ ..+ +.| -+-.+.++++.|+.+|+. +..+.. .+.++..++ +..++
T Consensus 322 ~~~~i~~---~a~d~i~i--Kv~------~iG-----GiTealkia~lA~~~G~~-~~v~H~-sGEted~~i---adLaV 380 (428)
T 3tqp_A 322 LEKGIKK---NIANAILV--KLN------QIG-----TLTETLATVGLAKSNKYG-VIISHR-SGETEDTTI---ADLAV 380 (428)
T ss_dssp HHHHHHT---TCCSEEEE--CHH------HHC-----CHHHHHHHHHHHHHTTCE-EEEECC-SBCCSCCHH---HHHHH
T ss_pred HHHHHHh---CCCCEEEe--ccc------ccC-----CHHHHHHHHHHHHHcCCe-EEEeCC-CCCchHHHH---HHHHH
Confidence 7776653 23445443 111 111 255677889999999985 445442 223433444 34455
Q ss_pred HcCCcEEeecCcccccCHHHHHHHHH
Q 006969 245 KVGATTLNIPDTVGITMPTEFGKLIA 270 (623)
Q Consensus 245 ~aGa~~I~l~DTvG~~~P~~v~~li~ 270 (623)
..++.-|. |-+.+.-+++.++=+
T Consensus 381 a~~~~~ik---~G~p~r~er~akyn~ 403 (428)
T 3tqp_A 381 ATDARQIK---TGSLCRSDRVAKYNR 403 (428)
T ss_dssp HTTCEEEE---CCCSSSHHHHHHHHH
T ss_pred HcCCCccc---CCCCcchhHHHHHhH
Confidence 66776555 333344455554433
No 473
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=59.18 E-value=96 Score=32.81 Aligned_cols=130 Identities=18% Similarity=0.156 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHH-cCCCeEEEcccCCCCCCHHHHHHHHHHHHHc-CCcEEeecCccc-ccCHHHH-HHHHHHHHHhCCC
Q 006969 203 VEIARSMVKFARS-LGCDDVEFSPEDAGRSDRKFLYEILGEVIKV-GATTLNIPDTVG-ITMPTEF-GKLIADIKANTPG 278 (623)
Q Consensus 203 l~~~~~~v~~ak~-~G~~~V~f~~eda~r~d~e~l~~~~~~~~~a-Ga~~I~l~DTvG-~~~P~~v-~~li~~l~~~~~~ 278 (623)
.+.+.+.++++++ .|+..|.|+.-+-.-...+.+.++++.+.+. +...|.+ -|.| +..|..+ .++++.|++.
T Consensus 147 ~eei~~~i~~i~~~~gi~~V~ltGGEPll~~d~~L~~il~~l~~~~~v~~i~i-~Tng~~~~p~~it~e~l~~L~~~--- 222 (416)
T 2a5h_A 147 MERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRI-GSRTPVVLPQRITPELVNMLKKY--- 222 (416)
T ss_dssp HHHHHHHHHHHHTCTTCCEEEEEESCTTSSCHHHHHHHHHHHHTSTTCCEEEE-ECSHHHHCGGGCCHHHHHHHGGG---
T ss_pred HHHHHHHHHHHHhcCCCcEEEEECCCCCCCCHHHHHHHHHHHHhcCCccEEEE-EecccccccccCCHHHHHHHHhc---
Q ss_pred CcceeEEEeecCCcch---HHHHHHHHHHhCCCEEEeccCCccCccCcccHHHHHHHHHhcc
Q 006969 279 IENVVISTHCQNDLGL---STANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRG 337 (623)
Q Consensus 279 ~~~v~i~~H~HND~Gl---AvANslaAv~aGA~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~ 337 (623)
..+.|++|+-+...+ ...+...+.++|....-.++.=-|-----..+++++..|...+
T Consensus 223 -~~v~Isl~~~~~~ei~~~v~~ai~~L~~aGi~v~i~~vll~GvNd~~e~l~~l~~~l~~lg 283 (416)
T 2a5h_A 223 -HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQSVLLRGVNDCVHVMKELVNKLVKIR 283 (416)
T ss_dssp -CSEEEEECCCSGGGCCHHHHHHHHHHHHTTCCEEEEEECCTTTTCSHHHHHHHHHHHHHTT
T ss_pred -CcEEEEEecCCHHHHhHHHHHHHHHHHHcCCEEEEEEEEECCCCCCHHHHHHHHHHHHHcC
No 474
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=59.12 E-value=13 Score=36.03 Aligned_cols=69 Identities=16% Similarity=0.084 Sum_probs=47.0
Q ss_pred HHHHHHHHHHcCCcEEeecCcccccCHH-HHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 236 LYEILGEVIKVGATTLNIPDTVGITMPT-EFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 236 l~~~~~~~~~aGa~~I~l~DTvG~~~P~-~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
..++++.+.++|++.|.+.|-.|...+. .. ++++.+++.+. +|+.+|.--.. ......++++||+.|..
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~----ipv~v~ggI~~---~~~~~~~l~~Gad~V~l 103 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAMD----IKVELSGGIRD---DDTLAAALATGCTRVNL 103 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHCS----SEEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhcC----CcEEEECCcCC---HHHHHHHHHcCCCEEEE
Confidence 3466788888999999998755543221 12 88889988763 67877753322 23467788899998853
No 475
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=59.12 E-value=1.4e+02 Score=29.25 Aligned_cols=69 Identities=12% Similarity=-0.000 Sum_probs=38.8
Q ss_pred CCHHHHHHHHHHHHHc-CCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE
Q 006969 231 SDRKFLYEILGEVIKV-GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 309 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~a-Ga~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~ 309 (623)
.+++.+..+++...+. |-..|++- ..|... ..++|+.+++..++. .+.+++-.++ ..-+...++ ||+.
T Consensus 146 ~~~e~~~~~a~~g~~~l~~~~Vyl~-~~G~~~---~~~~i~~i~~~~~~~-Pv~vGgGI~s-----~e~a~~~~~-gAd~ 214 (234)
T 2f6u_A 146 IDKELAASYALVGEKLFNLPIIYIE-YSGTYG---NPELVAEVKKVLDKA-RLFYGGGIDS-----REKAREMLR-YADT 214 (234)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEE-CTTSCC---CHHHHHHHHHHCSSS-EEEEESCCCS-----HHHHHHHHH-HSSE
T ss_pred CCHHHHHHHHHhhhhhcCCCEEEEe-CCCCcc---hHHHHHHHHHhCCCC-CEEEEecCCC-----HHHHHHHHh-CCCE
Confidence 3667676666665532 43556654 466522 567888888876322 2556654444 122233344 8888
Q ss_pred E
Q 006969 310 V 310 (623)
Q Consensus 310 V 310 (623)
|
T Consensus 215 V 215 (234)
T 2f6u_A 215 I 215 (234)
T ss_dssp E
T ss_pred E
Confidence 6
No 476
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=59.10 E-value=51 Score=33.19 Aligned_cols=126 Identities=14% Similarity=0.119 Sum_probs=82.4
Q ss_pred HHHHHHHHhHcCCCEEEEecCCCChh--HHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCCEE
Q 006969 103 KLDIARQLAKLGVDIIEAGFPAASKE--DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRI 180 (623)
Q Consensus 103 Kl~Ia~~L~~~Gvd~IEvGfP~~s~~--d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~v 180 (623)
-++.+....++|-|-|=+ .|.-... ..+.++.|.+.+... .++-+. +.++-++.+++. +.+.|
T Consensus 55 pv~aA~~ae~aGAdGITv-HlReDrRHI~d~Dv~~L~~~i~t~--------lNlEma--~t~emi~ial~~----kP~~v 119 (278)
T 3gk0_A 55 PVRAALAAEDAGADAITL-HLREDRRHIVDADVRTLRPRVKTR--------MNLECA--VTPEMLDIACEI----RPHDA 119 (278)
T ss_dssp HHHHHHHHHHTTCSEEEE-ECCTTCSSSCHHHHHHHHHHCSSC--------EEEEEC--SSHHHHHHHHHH----CCSEE
T ss_pred HHHHHHHHHHcCCCEEEe-ccCCCcccCCHHHHHHHHHHcCCC--------EEeecC--CCHHHHHHHHHc----CCCEE
Confidence 467777778999999999 6653221 023355555543211 233332 366777877775 44555
Q ss_pred EEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 006969 181 HTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 253 (623)
Q Consensus 181 ~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l 253 (623)
.++|...-.+...-|++.....+.+.+.|+..++.|+. |..-. | .|+ +.++++.+.||++|-|
T Consensus 120 -tLVPEkreE~TTegGlDv~~~~~~L~~~i~~L~~~GIr-VSLFI-D---pd~----~qI~aA~~~GAd~IEL 182 (278)
T 3gk0_A 120 -CLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVR-VSLFI-D---PDE----AQIRAAHETGAPVIEL 182 (278)
T ss_dssp -EECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCE-EEEEE-C---SCH----HHHHHHHHHTCSEEEE
T ss_pred -EECCCCCCCcCCCcchhhhccHHHHHHHHHHHHHCCCE-EEEEe-C---CCH----HHHHHHHHhCcCEEEE
Confidence 45677766665566777767788899999999999985 54422 1 233 4567788899999988
No 477
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=59.07 E-value=56 Score=31.68 Aligned_cols=118 Identities=10% Similarity=0.062 Sum_probs=68.6
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc--cc--CCCCCCH-----
Q 006969 163 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS--PE--DAGRSDR----- 233 (623)
Q Consensus 163 ~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~--~e--da~r~d~----- 233 (623)
.+++..++.++..|.+.|.+...... ..+ + ..+.+..+.+++.|++.+.+. +. +....++
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~~~-------~~~-~---~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~ 85 (290)
T 2qul_A 17 VDFPATAKRIAGLGFDLMEISLGEFH-------NLS-D---AKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDA 85 (290)
T ss_dssp CCHHHHHHHHHHTTCSEEEEESTTGG-------GSC-H---HHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHH
T ss_pred ccHHHHHHHHHHhCCCEEEEecCCcc-------ccc-h---hhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHH
Confidence 46777777778889999988754211 111 1 234566677888998633322 11 2222233
Q ss_pred --HHHHHHHHHHHHcCCcEEeecC-c-ccc-------cCHHHHHHHHHHHHHhCCC--CcceeEEEeecCC
Q 006969 234 --KFLYEILGEVIKVGATTLNIPD-T-VGI-------TMPTEFGKLIADIKANTPG--IENVVISTHCQND 291 (623)
Q Consensus 234 --e~l~~~~~~~~~aGa~~I~l~D-T-vG~-------~~P~~v~~li~~l~~~~~~--~~~v~i~~H~HND 291 (623)
+++.+.++.+.+.|+..|..+= + .|. .....+..+++.+++..+- ..++.|.+|.|+.
T Consensus 86 ~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~ 156 (290)
T 2qul_A 86 GTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVNR 156 (290)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECCCT
T ss_pred HHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCcc
Confidence 6788888999999999887531 1 132 3344455555555432110 0137799999985
No 478
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=59.04 E-value=30 Score=36.62 Aligned_cols=96 Identities=14% Similarity=0.089 Sum_probs=61.4
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeeccc-chhhHHHHHHHHhc
Q 006969 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NERDIKTAWEAVKY 174 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~-~~~dI~~a~eal~~ 174 (623)
..++.++-+++++.|.++|++.||. |. .+++..+++++... +|.+ +=.++ ...+++..++ .
T Consensus 222 ~~~~~~~A~~~~~~L~~~~i~~iE~--P~---~d~~~~~~l~~~~~---------iPIa-~dE~~~~~~~~~~~i~---~ 283 (409)
T 3go2_A 222 FNAKPEGYLKILRELADFDLFWVEI--DS---YSPQGLAYVRNHSP---------HPIS-SCETLFGIREFKPFFD---A 283 (409)
T ss_dssp TCSCHHHHHHHHHHTTTSCCSEEEC--CC---SCHHHHHHHHHTCS---------SCEE-ECTTCCHHHHHHHHHH---T
T ss_pred CCCCHHHHHHHHHHHhhcCCeEEEe--Cc---CCHHHHHHHHhhCC---------CCEE-eCCCcCCHHHHHHHHH---h
Confidence 3578999999999999999999995 53 36677777776532 2333 22222 3445554443 2
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~ 224 (623)
..++.|.+ +.++ --+..+.+++..|+++|+. +..+
T Consensus 284 ~~~d~v~~-------------k~~~-GGit~~~~ia~~A~~~gi~-~~~h 318 (409)
T 3go2_A 284 NAVDVAIV-------------DTIW-NGVWQSMKIAAFADAHDIN-VAPH 318 (409)
T ss_dssp TCCSEEEE-------------CHHH-HCHHHHHHHHHHHHHTTCE-EEEC
T ss_pred CCCCEEEe-------------CCCC-CCHHHHHHHHHHHHHcCCE-Eeec
Confidence 34566543 1122 3356677889999999985 5443
No 479
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=58.95 E-value=38 Score=36.97 Aligned_cols=69 Identities=22% Similarity=0.183 Sum_probs=48.9
Q ss_pred HHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecc
Q 006969 237 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTI 314 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv 314 (623)
.+.++++.++|++.|.|-=+.| .+..+.++|+.+++.+|+ ++|.+- ......-+..++++||+.|.+..
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g--~~~~~~~~i~~ir~~~p~---~~Vi~g----~v~t~e~a~~l~~aGaD~I~Vg~ 301 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHG--HSEGVLQRIRETRAAYPH---LEIIGG----NVATAEGARALIEAGVSAVKVGI 301 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTT---CCEEEE----EECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHhccCceEEeccccc--cchHHHHHHHHHHHHCCC---ceEEEc----ccCcHHHHHHHHHhCCCEEEECC
Confidence 4667788899999888743333 446788999999999975 455441 12234556888999999998543
No 480
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=58.75 E-value=19 Score=37.92 Aligned_cols=94 Identities=10% Similarity=0.041 Sum_probs=60.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecc-cchhhHHHHHHHHhcC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYA 175 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~eal~~a 175 (623)
.++.++-+++++.|.+.|++.||=-+| +.|++..+++.+... +|. ++=.+ ....+++..++. .
T Consensus 220 ~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------iPI-a~dE~~~~~~~~~~~i~~---~ 283 (392)
T 1tzz_A 220 RFNLETGIAYAKMLRDYPLFWYEEVGD---PLDYALQAALAEFYP---------GPM-ATGENLFSHQDARNLLRY---G 283 (392)
T ss_dssp CCCHHHHHHHHHHHTTSCCSEEECCSC---TTCHHHHHHHTTTCC---------SCE-EECTTCCSHHHHHHHHHH---S
T ss_pred CCCHHHHHHHHHHHHHcCCCeecCCCC---hhhHHHHHHHHhhCC---------CCE-EECCCCCCHHHHHHHHHc---C
Confidence 478999999999999999999997554 456777877766421 232 22222 245666666554 2
Q ss_pred ----CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC
Q 006969 176 ----KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD 219 (623)
Q Consensus 176 ----~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~ 219 (623)
..+.|.+ .. .+---+..+.++++.|+++|+.
T Consensus 284 ~~~~~~d~v~i--k~-----------~~~GGit~~~~i~~~A~~~gi~ 318 (392)
T 1tzz_A 284 GMRPDRDWLQF--DC-----------ALSYGLCEYQRTLEVLKTHGWS 318 (392)
T ss_dssp CCCTTTCEECC--CT-----------TTTTCHHHHHHHHHHHHHTTCC
T ss_pred CCccCCcEEEE--Cc-----------cccCCHHHHHHHHHHHHHCCCC
Confidence 2455432 11 1112255677889999999974
No 481
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=58.50 E-value=54 Score=30.69 Aligned_cols=91 Identities=14% Similarity=0.042 Sum_probs=54.5
Q ss_pred HHHHHHHHc--CCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEE
Q 006969 208 SMVKFARSL--GCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVIS 285 (623)
Q Consensus 208 ~~v~~ak~~--G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~ 285 (623)
+.++.+|+. +. .+.+++... ..+++ +++.+.++|++.|.+.+..+ ++.+.++++.+++. + +.+.
T Consensus 42 ~~i~~ir~~~~~~-~i~~~~~~~--~~~~~---~~~~~~~~Gad~v~v~~~~~---~~~~~~~~~~~~~~--g---~~~~ 107 (211)
T 3f4w_A 42 NAIKAIKEKYPHK-EVLADAKIM--DGGHF---ESQLLFDAGADYVTVLGVTD---VLTIQSCIRAAKEA--G---KQVV 107 (211)
T ss_dssp HHHHHHHHHCTTS-EEEEEEEEC--SCHHH---HHHHHHHTTCSEEEEETTSC---HHHHHHHHHHHHHH--T---CEEE
T ss_pred HHHHHHHHhCCCC-EEEEEEEec--cchHH---HHHHHHhcCCCEEEEeCCCC---hhHHHHHHHHHHHc--C---CeEE
Confidence 456666665 33 244444211 12232 47788899999999988753 46667888888875 2 2333
Q ss_pred EeecCCcchHHHHHHHHHHhCCCEEEec
Q 006969 286 THCQNDLGLSTANTIAGACAGARQVEVT 313 (623)
Q Consensus 286 ~H~HND~GlAvANslaAv~aGA~~Vd~T 313 (623)
+-+++- ..-..-+..+.++|++.|-+.
T Consensus 108 v~~~~~-~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 108 VDMICV-DDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp EECTTC-SSHHHHHHHHHHHTCCEEEEE
T ss_pred EEecCC-CCHHHHHHHHHHcCCCEEEEc
Confidence 322221 122345678889999998543
No 482
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=58.41 E-value=77 Score=31.77 Aligned_cols=66 Identities=26% Similarity=0.183 Sum_probs=48.8
Q ss_pred HHHHHHHhHcCCCEEEE-ecCCCCh---hHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcCCCCE
Q 006969 104 LDIARQLAKLGVDIIEA-GFPAASK---EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPR 179 (623)
Q Consensus 104 l~Ia~~L~~~Gvd~IEv-GfP~~s~---~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a~~~~ 179 (623)
..+++.|.++|.+.++. |.|.-+. .+++.++.+.+... +|.|+.=+-..++|...+++. |.+.
T Consensus 146 ~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~---------vPVI~eGGI~TPsDAa~AmeL----GAdg 212 (265)
T 1wv2_A 146 PIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAK---------VPVLVDAGVGTASDAAIAMEL----GCEA 212 (265)
T ss_dssp HHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCS---------SCBEEESCCCSHHHHHHHHHH----TCSE
T ss_pred HHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCC---------CCEEEeCCCCCHHHHHHHHHc----CCCE
Confidence 67788888888888887 6653222 46889999888532 367776666788999999997 8887
Q ss_pred EEE
Q 006969 180 IHT 182 (623)
Q Consensus 180 v~i 182 (623)
|-+
T Consensus 213 VlV 215 (265)
T 1wv2_A 213 VLM 215 (265)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 483
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=58.39 E-value=34 Score=40.75 Aligned_cols=79 Identities=15% Similarity=0.180 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHHcCCcEEee----cCc-----ccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHH
Q 006969 231 SDRKFLYEILGEVIKVGATTLNI----PDT-----VGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTAN 298 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~aGa~~I~l----~DT-----vG~---~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvAN 298 (623)
.+++.+.+.++.+.++|+|.|.| |-+ .|. ..|..+.++++++++.+. +||.+=.--|.--...-
T Consensus 645 ~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~----~Pv~vK~~~~~~~~~~~ 720 (1025)
T 1gte_A 645 YNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQ----IPFFAKLTPNVTDIVSI 720 (1025)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCS----SCEEEEECSCSSCHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhC----CceEEEeCCChHHHHHH
Confidence 56788889999999999998877 332 222 468889999999999873 45666444444445566
Q ss_pred HHHHHHhCCCEEEec
Q 006969 299 TIAGACAGARQVEVT 313 (623)
Q Consensus 299 slaAv~aGA~~Vd~T 313 (623)
+..+.++|++.|..+
T Consensus 721 a~~~~~~G~d~i~v~ 735 (1025)
T 1gte_A 721 ARAAKEGGADGVTAT 735 (1025)
T ss_dssp HHHHHHHTCSEEEEC
T ss_pred HHHHHHcCCCEEEEe
Confidence 788899999999983
No 484
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=58.31 E-value=24 Score=37.39 Aligned_cols=105 Identities=9% Similarity=0.026 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
+..++.++ +++++.|.++|+.+||=-+| +.|++..+++++...- |...+=.-....|++..++.
T Consensus 213 N~~w~~~~-~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~~~~--- 276 (400)
T 3mwc_A 213 NSSFELDQ-WETFKAMDAAKCLFHEQPLH---YEALLDLKELGERIET---------PICLDESLISSRVAEFVAKL--- 276 (400)
T ss_dssp TTCCCGGG-HHHHHHHGGGCCSCEESCSC---TTCHHHHHHHHHHSSS---------CEEESTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHH-HHHHHHHHhcCCCEEeCCCC---hhhHHHHHHHHhhCCC---------CEEEeCCcCCHHHHHHHHhc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCC
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~ 229 (623)
...+.|.+ +.++---+..+.++++.|+++|+. +..+....+
T Consensus 277 ~~~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~~~~~es 317 (400)
T 3mwc_A 277 GISNIWNI-------------KIQRVGGLLEAIKIYKIATDNGIK-LWGGTMPES 317 (400)
T ss_dssp TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHTTCE-EEECCSCCC
T ss_pred CCCCEEEE-------------cchhhCCHHHHHHHHHHHHHcCCE-EEecCCCCC
No 485
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=58.28 E-value=41 Score=31.82 Aligned_cols=164 Identities=15% Similarity=0.228 Sum_probs=87.3
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEecCC---CChhHHHHHHHHHHHhccccccCCCccceEEeecccc-hhhHHHHHHHHh
Q 006969 98 LTSKEKLDIARQLAKLGVDIIEAGFPA---ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-ERDIKTAWEAVK 173 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~---~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~-~~dI~~a~eal~ 173 (623)
.+.++-+++++.+.. -+..+++|.+- .++ +.++.|.+..+. +.+.-+-+.. ....+..++...
T Consensus 9 ~~l~~~~~~~~~~~~-~~~~~kv~~~~f~~~G~---~~i~~lr~~~~~---------~v~~D~kl~DI~~t~~~~v~~~~ 75 (208)
T 2czd_A 9 YEGERAIKIAKSVKD-YISMIKVNWPLILGSGV---DIIRRLKEETGV---------EIIADLKLADIPNTNRLIARKVF 75 (208)
T ss_dssp CSHHHHHHHHHHHGG-GCSEEEEEHHHHHHHCT---THHHHHHHHHCC---------EEEEEEEECSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhcc-cccEEEecHHHHHhhCH---HHHHHHHHcCCC---------EEEEEeeeCchHHHHHHHHHHHH
Confidence 356777777777643 37789998432 122 356666654211 1222222210 122234444555
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCC-----HHHHHHHHHHHHHcCC
Q 006969 174 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSD-----RKFLYEILGEVIKVGA 248 (623)
Q Consensus 174 ~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d-----~e~l~~~~~~~~~aGa 248 (623)
.+|.+.|.+...... ++++.+++.| -|.+.+. .+-.+ .+.+..++..+.+.|+
T Consensus 76 ~~Gad~vtvh~~~g~-------------------~~i~~~~~~~--gv~vl~~-t~~~~~~~~~~~~v~~~~~~a~~~G~ 133 (208)
T 2czd_A 76 GAGADYVIVHTFVGR-------------------DSVMAVKELG--EIIMVVE-MSHPGALEFINPLTDRFIEVANEIEP 133 (208)
T ss_dssp HTTCSEEEEESTTCH-------------------HHHHHHHTTS--EEEEECC-CCSGGGGTTTGGGHHHHHHHHHHHCC
T ss_pred hcCCCEEEEeccCCH-------------------HHHHHHHHhC--CcEEEEe-cCCcchhhHHHHHHHHHHHHHHHhCC
Confidence 679998776544331 1244555554 2555553 22111 4556777888889999
Q ss_pred cEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH--HHHHHHHHhCCCEEE
Q 006969 249 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST--ANTIAGACAGARQVE 311 (623)
Q Consensus 249 ~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAv--ANslaAv~aGA~~Vd 311 (623)
+.+.+.-| .|+++.+ +++..+. +..+ + |-|... +|...++++||+.+=
T Consensus 134 ~G~~~~~~----~~~~i~~----lr~~~~~--~~~i-v----~gGI~~~g~~~~~~~~aGad~vv 183 (208)
T 2czd_A 134 FGVIAPGT----RPERIGY----IRDRLKE--GIKI-L----APGIGAQGGKAKDAVKAGADYII 183 (208)
T ss_dssp SEEECCCS----STHHHHH----HHHHSCT--TCEE-E----ECCCCSSTTHHHHHHHHTCSEEE
T ss_pred cEEEECCC----ChHHHHH----HHHhCCC--CeEE-E----ECCCCCCCCCHHHHHHcCCCEEE
Confidence 98866544 4666644 4544442 1122 2 122222 267788899998764
No 486
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=58.10 E-value=65 Score=33.74 Aligned_cols=29 Identities=17% Similarity=0.100 Sum_probs=16.1
Q ss_pred HHHHHHHHHHcCCC----------CCHHHHHHHHHHHHH
Q 006969 424 RHALKDRLKELGYE----------LNDEQLGTIFWHFKA 452 (623)
Q Consensus 424 ~~~i~~~l~~lG~~----------l~~~~~~~~~~~iK~ 452 (623)
-..+|+.|+.+|+. +++++.+++-+.+++
T Consensus 296 p~~vK~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~ 334 (360)
T 4dpp_A 296 PIGINTALAQLGVSRPVFRLPYVPLPLSKRLEFVKLVKE 334 (360)
T ss_dssp THHHHHHHHHHTSSCSEEETTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 34677777777753 445555555444444
No 487
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=58.06 E-value=18 Score=37.96 Aligned_cols=117 Identities=16% Similarity=0.156 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhc
Q 006969 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (623)
Q Consensus 95 g~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~ 174 (623)
+..++.++-+++++.|.++|++.||=-+| +.|++..+++++..+- |...+=.-....|+...++.
T Consensus 199 n~~~~~~~A~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------pIa~dE~~~~~~~~~~~i~~--- 263 (377)
T 3my9_A 199 NQALTPFGAMKILRDVDAFRPTFIEQPVP---RRHLDAMAGFAAALDT---------PILADESCFDAVDLMEVVRR--- 263 (377)
T ss_dssp TTCCCTTTHHHHHHHHHTTCCSCEECCSC---TTCHHHHHHHHHHCSS---------CEEESTTCSSHHHHHHHHHH---
T ss_pred CCCcCHHHHHHHHHHHhhcCCCEEECCCC---ccCHHHHHHHHHhCCC---------CEEECCccCCHHHHHHHHHc---
Q ss_pred CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHH
Q 006969 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEIL 240 (623)
Q Consensus 175 a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~ 240 (623)
...+.|.+ +.++---+..+.+++..|+++|+. +..+....+.......+.++
T Consensus 264 ~~~d~v~~-------------k~~~~GGit~~~~i~~~a~~~gi~-~~~~~~~es~i~~aa~~hla 315 (377)
T 3my9_A 264 QAADAISV-------------KIMKCGGLMKAQSLMAIADTAGLP-GYGGTLWEGGIALAAGTQLI 315 (377)
T ss_dssp TCCSEEEC-------------CHHHHTSHHHHHHHHHHHHHHTCC-EECCEECCSHHHHHHHHHHH
T ss_pred CCCCEEEe-------------cccccCCHHHHHHHHHHHHHcCCe-EecCCCCCcHHHHHHHHHHH
No 488
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=57.84 E-value=66 Score=33.08 Aligned_cols=74 Identities=19% Similarity=0.153 Sum_probs=50.7
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeecC--cc-c-------ccCHHHHH---HHHHHHHHhCCCCcceeEEEeecCCcchHH
Q 006969 230 RSDRKFLYEILGEVIKVGATTLNIPD--TV-G-------ITMPTEFG---KLIADIKANTPGIENVVISTHCQNDLGLST 296 (623)
Q Consensus 230 r~d~e~l~~~~~~~~~aGa~~I~l~D--Tv-G-------~~~P~~v~---~li~~l~~~~~~~~~v~i~~H~HND~GlAv 296 (623)
..+++.+++.++..++.||+.|-+.= |. | +...+|+. .+|+.+++.+ +++|++=.=+ -
T Consensus 45 ~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~----~vpISIDT~~-----~ 115 (314)
T 3tr9_A 45 HLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF----PQLISVDTSR-----P 115 (314)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC----CSEEEEECSC-----H
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC----CCeEEEeCCC-----H
Confidence 35789999999999999999887762 32 1 11235544 4556666664 3788885544 3
Q ss_pred HHHHHHHHhCCCEEEe
Q 006969 297 ANTIAGACAGARQVEV 312 (623)
Q Consensus 297 ANslaAv~aGA~~Vd~ 312 (623)
.-+.+|+++||+.|+-
T Consensus 116 ~Va~aAl~aGa~iIND 131 (314)
T 3tr9_A 116 RVMREAVNTGADMIND 131 (314)
T ss_dssp HHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 4457889999999965
No 489
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=57.82 E-value=38 Score=34.36 Aligned_cols=61 Identities=16% Similarity=0.244 Sum_probs=49.7
Q ss_pred EEEcccCCCCCCHHHHHHHHHHHHHcCCcEEeecCccccc-CHHHHHHHHHHHHHhCCCCcceeEEEeec
Q 006969 221 VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGIT-MPTEFGKLIADIKANTPGIENVVISTHCQ 289 (623)
Q Consensus 221 V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l~DTvG~~-~P~~v~~li~~l~~~~~~~~~v~i~~H~H 289 (623)
+-++|. +..++.+.+.++.+.+.|.|.|-+. |.|+. ..+.+.++++.+|+.++ +|+-+|+=
T Consensus 43 ~liDPd---K~~~~~~~~~~~~~~~sGtDai~VG-S~~vt~~~~~~~~~v~~ik~~~~----lPvil~fP 104 (286)
T 3vk5_A 43 HIIDPF---KVPVTEAVEKAAELTRLGFAAVLLA-STDYESFESHMEPYVAAVKAATP----LPVVLHFP 104 (286)
T ss_dssp EEECTT---TSCHHHHHHHHHHHHHTTCSCEEEE-CSCCSSHHHHHHHHHHHHHHHCS----SCEEEECC
T ss_pred EEECCC---CCCcHHHHHHHHHHHhcCCCEEEEc-cCCCCcchHHHHHHHHHHHHhCC----CCEEEECC
Confidence 445663 6788888899999999999999999 99873 27889999999999773 66777665
No 490
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=57.75 E-value=92 Score=29.90 Aligned_cols=198 Identities=11% Similarity=-0.006 Sum_probs=98.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEecCCCChh-HHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcC
Q 006969 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (623)
Q Consensus 97 ~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 175 (623)
.|-.+-...+-+.+.+.|++.+-. .....++ +.+.++.+... .++ .|..+. .........++.+...
T Consensus 15 ~~~~~~~~gi~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~---~vd-------giI~~~-~~~~~~~~~~~~~~~~ 82 (290)
T 2fn9_A 15 PWFVVLAETAKQRAEQLGYEATIF-DSQNDTAKESAHFDAIIAA---GYD-------AIIFNP-TDADGSIANVKRAKEA 82 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEE-ECTTCHHHHHHHHHHHHHT---TCS-------EEEECC-SCTTTTHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEe-CCCCCHHHHHHHHHHHHHc---CCC-------EEEEec-CChHHHHHHHHHHHHC
Confidence 344566667777888999876543 2222332 23455555442 111 122221 1222332334445556
Q ss_pred CCCEEEEEecCCHHHHHHH-hCCCHHHHHHHHHHHHHHHHHc------CCCe--EEE-cccCCCCCCHHHHHHHHHHHHH
Q 006969 176 KRPRIHTFIATSGIHMEHK-LRKTKQQVVEIARSMVKFARSL------GCDD--VEF-SPEDAGRSDRKFLYEILGEVIK 245 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~-l~~t~ee~l~~~~~~v~~ak~~------G~~~--V~f-~~eda~r~d~e~l~~~~~~~~~ 245 (623)
++|.|.+-....+...... .+.+. .+....+++++.+. |.+. +.| ..........+.+.-+.+++.+
T Consensus 83 ~iPvV~~~~~~~~~~~~~~~V~~D~---~~~~~~~~~~L~~~~g~~~~G~r~i~i~~l~g~~~~~~~~~R~~gf~~~l~~ 159 (290)
T 2fn9_A 83 GIPVFCVDRGINARGLAVAQIYSDN---YYGGVLAGEYFVKFLKEKYPDAKEIPYAELLGILSAQPTWDRSNGFHSVVDQ 159 (290)
T ss_dssp TCCEEEESSCCSCSSSSSEEEEECH---HHHHHHHHHHHHHHHHHHCSSCSCEEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCeEEEEecCCCCCCceEEEEeCCH---HHHHHHHHHHHHHHhcccCCcccceeEEEEEcCCCCchHHHHHHHHHHHHHh
Confidence 8887765322211000001 22333 34455666777766 7665 433 3211222223455555666666
Q ss_pred c-CCcEEeecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCcc
Q 006969 246 V-GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (623)
Q Consensus 246 a-Ga~~I~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlG 318 (623)
. |.+.+.+ ..+-..+....+.+..+.+..|+.+ .+=|.||. +|.+-..++-+.|-+ |.+|.|++
T Consensus 160 ~~g~~~~~~--~~~~~~~~~~~~~~~~ll~~~~~~~----ai~~~~d~-~a~g~~~al~~~g~~--dv~vig~d 224 (290)
T 2fn9_A 160 YPEFKMVAQ--QSAEFDRDTAYKVTEQILQAHPEIK----AIWCGNDA-MALGAMKACEAAGRT--DIYIFGFD 224 (290)
T ss_dssp STTEEEEEE--EECTTCHHHHHHHHHHHHHHCTTCC----EEEESSHH-HHHHHHHHHHHTTCT--TCEEECCB
T ss_pred CCCCEEEEe--ccCCCCHHHHHHHHHHHHHhCCCCc----EEEECCch-HHHHHHHHHHHCCCC--CeEEEEeC
Confidence 6 6543322 1233466767777777666555432 34477765 455444455567762 57788765
No 491
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=57.72 E-value=90 Score=31.79 Aligned_cols=140 Identities=16% Similarity=0.149 Sum_probs=80.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeec-CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH--hCC
Q 006969 231 SDRKFLYEILGEVIKVGATTLNIP-DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC--AGA 307 (623)
Q Consensus 231 ~d~e~l~~~~~~~~~aGa~~I~l~-DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~--aGA 307 (623)
.+++.+++.++..++.||+.|-++ +......++++.+++..++.. +...++||++=.=+ -.-..+|++ +|+
T Consensus 34 ~~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~~-~~~~~vpisIDT~~-----~~V~eaaL~~~~Ga 107 (300)
T 3k13_A 34 KKYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSE-PEIARVPVMIDSSK-----WEVIEAGLKCLQGK 107 (300)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTC-HHHHTSCEEEECSC-----HHHHHHHHHHCSSC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHh-hhcCCCeEEEeCCC-----HHHHHHHHHhcCCC
Confidence 367888999999999999988775 444445567888888888631 00013678876643 334467788 799
Q ss_pred CEEEeccCCccCccCcccHHHHHHHHHhcccc-cccccc---cCCChhHHHHHHHHHHHH--hCCCCCCCCcccCcchh
Q 006969 308 RQVEVTINGIGERAGNASLEEVVMAFKCRGEH-ILGGLY---TGINTRHIVMASKMVEEY--TGLHVQPHKAIVGANAF 380 (623)
Q Consensus 308 ~~Vd~Tv~GlGERaGNa~lEevv~~L~~~~~~-~~~G~~---t~idl~~L~~~s~~v~~~--~g~~i~~~~pivG~~aF 380 (623)
..|+.--.+- |-..+++++......+-. .++-.+ ..-+.+.-.++++.+.+. ...-+++..=|+-..++
T Consensus 108 ~iINdIs~~~----~d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t~~~~~~i~~r~~~~~~~~~Gi~~~~IilDPgig 182 (300)
T 3k13_A 108 SIVNSISLKE----GEEVFLEHARIIKQYGAATVVMAFDEKGQADTAARKIEVCERAYRLLVDKVGFNPHDIIFDPNVL 182 (300)
T ss_dssp CEEEEECSTT----CHHHHHHHHHHHHHHTCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTCCCGGGEEEECCCC
T ss_pred CEEEeCCccc----CChhHHHHHHHHHHhCCeEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCC
Confidence 9886543332 234455666655554321 111110 112344445566555555 33445565555555553
No 492
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=57.64 E-value=1.1e+02 Score=30.43 Aligned_cols=166 Identities=16% Similarity=0.165 Sum_probs=89.0
Q ss_pred CHHHHHHHHHHHhHcCC-CEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHH----HHHHHHh
Q 006969 99 TSKEKLDIARQLAKLGV-DIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIK----TAWEAVK 173 (623)
Q Consensus 99 t~e~Kl~Ia~~L~~~Gv-d~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~----~a~eal~ 173 (623)
+.++-+++++.|.. .+ +.+++|.+---..-.+.++.|.+. +. +.+..+-+ .||. .+.+.+.
T Consensus 15 ~~~~al~l~~~l~~-~v~~~~KvG~~l~~~~G~~~v~~Lk~~-g~---------~VflDlK~---~DIpnTv~~a~~~~~ 80 (259)
T 3tfx_A 15 NEEQLNKILSKLGD-PHDVFVKVGMELFYNAGIDVIKKLTQQ-GY---------KIFLDLKM---HDIPNTVYNGAKALA 80 (259)
T ss_dssp CHHHHHHHHHTTCC-GGGCEEEECHHHHHHHCHHHHHHHHHT-TC---------EEEEEEEE---CSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCc-ccceEEEeCHHHHHhcCHHHHHHHHHC-CC---------cEEEEecc---cccchHHHHHHHHHH
Confidence 67778888877753 36 899999764222224577777663 11 34554443 3544 4456667
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc---CC---CeEEE----ccc------C-CCCCC-HHH
Q 006969 174 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL---GC---DDVEF----SPE------D-AGRSD-RKF 235 (623)
Q Consensus 174 ~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~---G~---~~V~f----~~e------d-a~r~d-~e~ 235 (623)
..|++.+.+...... +++..+++.+++. |. ..+.+ ++. + ....+ .+.
T Consensus 81 ~~gad~vTVh~~~G~---------------~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~~e~ 145 (259)
T 3tfx_A 81 KLGITFTTVHALGGS---------------QMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPMAEQ 145 (259)
T ss_dssp TTTCSEEEEEGGGCH---------------HHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBSSCHHHH
T ss_pred hcCCCEEEEcCCCCH---------------HHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhCCCCCHHHH
Confidence 778998877554332 3334444554432 31 11222 110 0 01112 356
Q ss_pred HHHHHHHHHHcCCcEEeecCcccccCHHHHHHHHHHHHHh----CCCCcceeEEEeecCCcchH------HHHHHHHHHh
Q 006969 236 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKAN----TPGIENVVISTHCQNDLGLS------TANTIAGACA 305 (623)
Q Consensus 236 l~~~~~~~~~aGa~~I~l~DTvG~~~P~~v~~li~~l~~~----~~~~~~v~i~~H~HND~GlA------vANslaAv~a 305 (623)
+.++++.+.++|++.+.- .|.++..+=+.+... .|++ -. .|-+ +++.-.|+++
T Consensus 146 v~~~A~~a~~~G~dGvV~-------s~~e~~~ir~~~~~~f~~vtPGI-------r~---~g~~~gDQ~Rv~T~~~a~~a 208 (259)
T 3tfx_A 146 VLSLAKMAKHSGADGVIC-------SPLEVKKLHENIGDDFLYVTPGI-------RP---AGNAKDDQSRVATPKMAKEW 208 (259)
T ss_dssp HHHHHHHHHHTTCCEEEC-------CGGGHHHHHHHHCSSSEEEECCC-------CC---C-----------CHHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEE-------CHHHHHHHHhhcCCccEEEcCCc-------CC---CCCCcCCccccCCHHHHHHc
Confidence 778888888999887653 377764432222111 2332 22 1211 3457788999
Q ss_pred CCCEE
Q 006969 306 GARQV 310 (623)
Q Consensus 306 GA~~V 310 (623)
||+.+
T Consensus 209 Gad~i 213 (259)
T 3tfx_A 209 GSSAI 213 (259)
T ss_dssp TCSEE
T ss_pred CCCEE
Confidence 99986
No 493
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=57.62 E-value=52 Score=34.52 Aligned_cols=99 Identities=14% Similarity=0.165 Sum_probs=65.3
Q ss_pred CCCCHHHHHHHHHHHhHcCC--CEEEEecCCCChhHHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHh
Q 006969 96 ATLTSKEKLDIARQLAKLGV--DIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVK 173 (623)
Q Consensus 96 ~~~t~e~Kl~Ia~~L~~~Gv--d~IEvGfP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~ 173 (623)
..++.++-+++++.|.++|+ ..||=-+| +.|++..+++++..+- |. +=.-....+++..++.
T Consensus 196 ~~~~~~~A~~~~~~l~~~~i~~~~iEqP~~---~~d~~~~~~l~~~~~i---------PI--dE~~~~~~~~~~~~~~-- 259 (391)
T 3gd6_A 196 HLLNWKDAHRAIKRLTKYDLGLEMIESPAP---RNDFDGLYQLRLKTDY---------PI--SEHVWSFKQQQEMIKK-- 259 (391)
T ss_dssp TCSCHHHHHHHHHHHTTCCSSCCEEECCSC---TTCHHHHHHHHHHCSS---------CE--EEECCCHHHHHHHHHH--
T ss_pred CCcCHHHHHHHHHHHHhcCCCcceecCCCC---hhhHHHHHHHHHHcCC---------Cc--CCCCCCHHHHHHHHHc--
Confidence 44689999999999999999 99996443 4567888888876422 22 3222356677766654
Q ss_pred cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 006969 174 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (623)
Q Consensus 174 ~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~ 225 (623)
..++.|.+ .. ++---+..+.++++.|+++|+. +..+.
T Consensus 260 -~~~d~v~~--k~-----------~~~GGit~~~~ia~~A~~~gi~-~~~~~ 296 (391)
T 3gd6_A 260 -DAIDIFNI--SP-----------VFIGGLTSAKKAAYAAEVASKD-VVLGT 296 (391)
T ss_dssp -TCCSEEEE--CH-----------HHHTSHHHHHHHHHHHHHTTCE-EEECC
T ss_pred -CCCCEEEE--Cc-----------hhcCCHHHHHHHHHHHHHcCCE-EEecC
Confidence 24566543 11 1111256677889999999985 55543
No 494
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=57.60 E-value=43 Score=38.38 Aligned_cols=115 Identities=13% Similarity=0.088 Sum_probs=75.7
Q ss_pred hhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCC-CHHHHHHHHHHHHHHHHHcCCCeE-EEcccCCCCCCHHH---H
Q 006969 162 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRK-TKQQVVEIARSMVKFARSLGCDDV-EFSPEDAGRSDRKF---L 236 (623)
Q Consensus 162 ~~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~-t~ee~l~~~~~~v~~ak~~G~~~V-~f~~eda~r~d~e~---l 236 (623)
.+++.+-++.+...+...+|+...-.+.|....++. -++...+.+++.++||++.|++.| +++|...-..+.+. +
T Consensus 143 ~~~ik~~id~ma~~KlN~~h~hl~Ddp~~~~~~wr~~yP~lt~~ei~elv~yA~~rgI~vvpeI~Pg~~~~~~~~~~~~l 222 (716)
T 2cho_A 143 HQARLSQLKFYGKNKMNTYIYGPKDDPYHSAPNWRLPYPDKEAAQLQELVAVANENEVDFVWAIHPGQDIKWNKEDRDLL 222 (716)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCTTCTTTSTTGGGSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTTCCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeeccCcccccccccccCChhhHHHHHHHHHHHHHcCCEEEEeecccccCCCCHHHHHHH
Confidence 577888888888889999998776554444212221 223356789999999999998632 45665333433333 4
Q ss_pred HHHHHHHHHcCCcEEeec--Cccccc-CHHHHHHHHHHHHHhC
Q 006969 237 YEILGEVIKVGATTLNIP--DTVGIT-MPTEFGKLIADIKANT 276 (623)
Q Consensus 237 ~~~~~~~~~aGa~~I~l~--DTvG~~-~P~~v~~li~~l~~~~ 276 (623)
+..+..+.+.|++.+.+. |+.|.. .+....+++..+.+++
T Consensus 223 ~~k~~~l~~lG~r~~~i~~Dd~~~~g~~~~~~~~ll~~~~~~~ 265 (716)
T 2cho_A 223 LAKFEKMYQLGVRSFAVFFDDISGEGTNPQKQAELLNYIDEKF 265 (716)
T ss_dssp HHHHHHHHHTTCCEEEEECCSCCSGGGCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCeeEEecccCCCCCcchHHHHHHHHHHHHHH
Confidence 445556678999876554 666543 4555788898888774
No 495
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=57.51 E-value=34 Score=33.13 Aligned_cols=70 Identities=11% Similarity=0.045 Sum_probs=47.0
Q ss_pred HHHHHHHHHHcCCcEEeecCcccccC-HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 006969 236 LYEILGEVIKVGATTLNIPDTVGITM-PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (623)
Q Consensus 236 l~~~~~~~~~aGa~~I~l~DTvG~~~-P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~ 312 (623)
..++++.+.++|++.|.+.|-.+... .....++++.+++.++ +||.+|.--.. ......++++||+.|..
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~----ipvi~~ggI~~---~~~~~~~~~~Gad~V~l 102 (253)
T 1thf_D 32 PVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQID----IPFTVGGGIHD---FETASELILRGADKVSI 102 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCC----SCEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCC----CCEEEeCCCCC---HHHHHHHHHcCCCEEEE
Confidence 34667888899999999888765532 2234567788887652 56777643321 24577778889998843
No 496
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=57.44 E-value=67 Score=31.70 Aligned_cols=113 Identities=16% Similarity=0.193 Sum_probs=65.2
Q ss_pred HHHHHHHHHhHcCCCEEEEe-cCCCChhHHHHHHHHHHHhccccccCCCccceEEe-ecccchhhHHHHHHHHhcCCCCE
Q 006969 102 EKLDIARQLAKLGVDIIEAG-FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-LSRCNERDIKTAWEAVKYAKRPR 179 (623)
Q Consensus 102 ~Kl~Ia~~L~~~Gvd~IEvG-fP~~s~~d~e~v~~i~~~~~~~~~~~~~l~~~i~~-~~r~~~~dI~~a~eal~~a~~~~ 179 (623)
+-.++++...+.|.+.|-+= -+.......+.++.+.+.+. .|.++. |.+ +..+++.+.+ +|++.
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v~---------lPvl~kdfI~-d~~qi~~a~~----~GAD~ 131 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAVD---------LPLLRKDFVV-DPFMLEEARA----FGASA 131 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHCC---------SCEEEESCCC-SHHHHHHHHH----TTCSE
T ss_pred CHHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhcC---------CCEEECCcCC-CHHHHHHHHH----cCCCE
Confidence 45789999999999999882 12211122344555555431 133322 221 3335555544 49999
Q ss_pred EEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcccCCCCCCHHHHHHHHHHHHHcCCcEEee
Q 006969 180 IHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 253 (623)
Q Consensus 180 v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~V~f~~eda~r~d~e~l~~~~~~~~~aGa~~I~l 253 (623)
|++....- + +.+.+.+++++++|++ +.+.. .+++.+ +.+.++|++.|.+
T Consensus 132 VlL~~~~l-------------~--~~l~~l~~~a~~lGl~-~lvev-----~~~~E~----~~a~~~gad~IGv 180 (254)
T 1vc4_A 132 ALLIVALL-------------G--ELTGAYLEEARRLGLE-ALVEV-----HTEREL----EIALEAGAEVLGI 180 (254)
T ss_dssp EEEEHHHH-------------G--GGHHHHHHHHHHHTCE-EEEEE-----CSHHHH----HHHHHHTCSEEEE
T ss_pred EEECccch-------------H--HHHHHHHHHHHHCCCe-EEEEE-----CCHHHH----HHHHHcCCCEEEE
Confidence 99865421 1 3466788888999985 33322 233333 3566778887655
No 497
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=57.20 E-value=90 Score=31.94 Aligned_cols=36 Identities=22% Similarity=0.214 Sum_probs=22.1
Q ss_pred HHHHHHhHcCCCEEEEecC---CCChhHH-----HHHHHHHHHh
Q 006969 105 DIARQLAKLGVDIIEAGFP---AASKEDF-----EAVRTIAKEV 140 (623)
Q Consensus 105 ~Ia~~L~~~Gvd~IEvGfP---~~s~~d~-----e~v~~i~~~~ 140 (623)
++++.+.++|++.|.+.-+ .-||+++ ...+++.+.+
T Consensus 197 ~~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i 240 (353)
T 1j93_A 197 KYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSV 240 (353)
T ss_dssp HHHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHH
Confidence 3455666899999998643 2467764 3344555543
No 498
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=57.20 E-value=73 Score=30.75 Aligned_cols=124 Identities=8% Similarity=0.014 Sum_probs=64.7
Q ss_pred hhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCe--EE-EcccC--CCCCC-----
Q 006969 163 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD--VE-FSPED--AGRSD----- 232 (623)
Q Consensus 163 ~dI~~a~eal~~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~G~~~--V~-f~~ed--a~r~d----- 232 (623)
.+++.+++.++..|.+.|.++.... +.......+. +.+.+..+.++++|++. +. ..+.. ....+
T Consensus 12 ~~l~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~~~----~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~ 85 (285)
T 1qtw_A 12 GGLANAAIRAAEIDATAFALFTKNQ--RQWRAAPLTT----QTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALE 85 (285)
T ss_dssp TCHHHHHHHHHHTTCSEEECCSSCS--SCSSCCCCCH----HHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEeeCCCC--CcCcCCCCCH----HHHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHH
Confidence 4577777777778999988853211 0000001222 23445556778888861 11 12211 11123
Q ss_pred --HHHHHHHHHHHHHcCCcEEeecCc--ccccCHH-HHHHHHHHHHHhCCCCcceeEEEeecCCc
Q 006969 233 --RKFLYEILGEVIKVGATTLNIPDT--VGITMPT-EFGKLIADIKANTPGIENVVISTHCQNDL 292 (623)
Q Consensus 233 --~e~l~~~~~~~~~aGa~~I~l~DT--vG~~~P~-~v~~li~~l~~~~~~~~~v~i~~H~HND~ 292 (623)
.+++.+.++.+.+.|+..|.+.-. .+...++ .+..+++.+++......++.|.++.|+..
T Consensus 86 ~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv~l~lEn~~~~ 150 (285)
T 1qtw_A 86 KSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQ 150 (285)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEecCCCC
Confidence 256777888888999998877311 1111232 33444444443221111477888888753
No 499
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=57.18 E-value=80 Score=31.24 Aligned_cols=199 Identities=15% Similarity=0.108 Sum_probs=95.3
Q ss_pred CCHHHHHHHHHHHhHc-CCCEEEEecCCCChh-HHHHHHHHHHHhccccccCCCccceEEeecccchhhHHHHHHHHhcC
Q 006969 98 LTSKEKLDIARQLAKL-GVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (623)
Q Consensus 98 ~t~e~Kl~Ia~~L~~~-Gvd~IEvGfP~~s~~-d~e~v~~i~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~eal~~a 175 (623)
|-.+-...+-+.+.+. |++.+-.. ...++. +.+.++.+... .++ .|..+. .....+...++.+...
T Consensus 19 ~~~~~~~gi~~~a~~~~g~~l~i~~-~~~~~~~~~~~i~~l~~~---~vd-------giIi~~-~~~~~~~~~~~~~~~~ 86 (325)
T 2x7x_A 19 WRHKMNDEILREAMFYNGVSVEIRS-AGDDNSKQAEDVHYFMDE---GVD-------LLIISA-NEAAPMTPIVEEAYQK 86 (325)
T ss_dssp HHHHHHHHHHHHHTTSSSCEEEEEE-CTTCHHHHHHHHHHHHHT---TCS-------EEEECC-SSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeC-CCCCHHHHHHHHHHHHHc---CCC-------EEEEeC-CCHHHHHHHHHHHHHC
Confidence 3344455566777787 88765332 222332 33455555432 111 122221 2222333344545556
Q ss_pred CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEE-cccCCCCCCHHHHHHHHHHHHHc-CCcEE
Q 006969 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEF-SPEDAGRSDRKFLYEILGEVIKV-GATTL 251 (623)
Q Consensus 176 ~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak~~--G~~~V~f-~~eda~r~d~e~l~~~~~~~~~a-Ga~~I 251 (623)
++|.|.+-....+.......+.+. .+....+++++.+. |...|.| ..........+.+.-+.+++.+. |....
T Consensus 87 ~iPvV~~~~~~~~~~~~~~V~~D~---~~~g~~a~~~L~~~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~pg~~~~ 163 (325)
T 2x7x_A 87 GIPVILVDRKILSDKYTAYIGADN---YEIGRSVGNYIASSLKGKGNIVELTGLSGSTPAMERHQGFMAAISKFPDIKLI 163 (325)
T ss_dssp TCCEEEESSCCSSSCSSEEEEECH---HHHHHHHHHHHHHHTTTEEEEEEEESCTTSHHHHHHHHHHHHHHHTCTEEEEE
T ss_pred CCeEEEeCCCCCCcceeEEEecCH---HHHHHHHHHHHHHHcCCCceEEEEECCCCCccHHHHHHHHHHHHHhCCCCEEE
Confidence 888776532221100000122232 34455677777775 7655654 22112222234555556666666 65432
Q ss_pred eecCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccCCccC
Q 006969 252 NIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGE 319 (623)
Q Consensus 252 ~l~DTvG~~~P~~v~~li~~l~~~~~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~Vd~Tv~GlGE 319 (623)
.+. .+-..+....+.+..+.+..|..+ .+=|.||. +|++-..+.-+.|.- =|.+|.|++.
T Consensus 164 ~~~--~~~~~~~~~~~~~~~ll~~~~~~~----aI~~~nd~-~A~g~~~al~~~Gip-~dv~vig~D~ 223 (325)
T 2x7x_A 164 DKA--DAAWERGPAEIEMDSMLRRHPKID----AVYAHNDR-IAPGAYQAAKMAGRE-KEMIFVGIDA 223 (325)
T ss_dssp EEE--ECTTSHHHHHHHHHHHHHHCSCCC----EEEESSTT-HHHHHHHHHHHTTCT-TSSEEEEEEC
T ss_pred eee--cCCCCHHHHHHHHHHHHHhCCCCC----EEEECCCc-hHHHHHHHHHHcCCC-CCeEEEEECC
Confidence 211 233456666777777666555432 33377775 444444444566731 1567777654
No 500
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=57.15 E-value=1.9e+02 Score=30.21 Aligned_cols=198 Identities=16% Similarity=0.147 Sum_probs=110.4
Q ss_pred cccCCCCC--CCCCHHHHHHHHHHHhHcCCCEEEEecCCC-------C-hh-------------HHHHHHHHHHHhcccc
Q 006969 88 RDGEQSPG--ATLTSKEKLDIARQLAKLGVDIIEAGFPAA-------S-KE-------------DFEAVRTIAKEVGNAV 144 (623)
Q Consensus 88 RDG~Q~~g--~~~t~e~Kl~Ia~~L~~~Gvd~IEvGfP~~-------s-~~-------------d~e~v~~i~~~~~~~~ 144 (623)
+.+.+.-+ ...+.+.-..+++.-.+++-+.|=-.+|.. . +. -...++.+++...
T Consensus 25 ~~~~yAVpAfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~~~~i~ga~~~~~~v~~~A~~~~--- 101 (358)
T 1dos_A 25 KENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYG--- 101 (358)
T ss_dssp HHTTCCEEEEECCSHHHHHHHHHHHHHHTCCEEEEECHHHHHHHHCTTSCCCSTTHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred HHCCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHHHHhcCCCccccchhhhHHHhHHHHHHHHHHHHHHCC---
Confidence 34444433 245789999999999999998764323210 0 00 0233444444321
Q ss_pred ccCCCccceEEeecccch---hhHHHHHHHHh-------cCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 006969 145 DAESGYVPVICGLSRCNE---RDIKTAWEAVK-------YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFAR 214 (623)
Q Consensus 145 ~~~~~l~~~i~~~~r~~~---~dI~~a~eal~-------~a~~~~v~i~~~~Sd~h~~~~l~~t~ee~l~~~~~~v~~ak 214 (623)
+|++.=+=-+.. +.++.++++.. ..|...|.+ . .| ..+.|||++..++.+++|+
T Consensus 102 ------VPVaLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~gFtSVMi-D-gS--------~~p~eENI~~Tkevv~~ah 165 (358)
T 1dos_A 102 ------VPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMI-D-LS--------EESLQENIEICSKYLERMS 165 (358)
T ss_dssp ------CEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEE-C-CT--------TSCHHHHHHHHHHHHHHHH
T ss_pred ------CCEEEECCCCCCccHHHHHHHHHHHHHHHHhcccCCCceEee-c-CC--------CCCHHHHHHHHHHHHHHHH
Confidence 354444334433 55777776641 134666533 3 23 3578999999999999999
Q ss_pred HcCCCeEEE------cccCC----------CCCCHHHHHHHHHHHHHcCCc-EEeecCcccc-----------cCHHHHH
Q 006969 215 SLGCDDVEF------SPEDA----------GRSDRKFLYEILGEVIKVGAT-TLNIPDTVGI-----------TMPTEFG 266 (623)
Q Consensus 215 ~~G~~~V~f------~~eda----------~r~d~e~l~~~~~~~~~aGa~-~I~l~DTvG~-----------~~P~~v~ 266 (623)
..|+. |+- +-||. -.|+|+.+.+++++.- |+| ...|+=++|. +.|+.+.
T Consensus 166 ~~gvs-VEaELG~vGG~EDgv~~~~~~~~~~yT~Peea~~fv~~tt--gvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~ 242 (358)
T 1dos_A 166 KIGMT-LEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELS--KISPRFTIAASFGNVHGVYKAGNVVLTPTILR 242 (358)
T ss_dssp HTTCE-EEEECCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHHH--TTCSCEEEECCSSCCCSSCCCSCCCCCTHHHH
T ss_pred HcCCE-EEEEeccccCcCCCccccccccccccCCHHHHHHHHHHhc--CCChhceEEEecccccCccCCCCCCcCHHHHH
Confidence 99974 543 22332 2489999999887643 444 2223323332 2334444
Q ss_pred HHHHHHHHhC--CCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 006969 267 KLIADIKANT--PGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (623)
Q Consensus 267 ~li~~l~~~~--~~~~~v~i~~H~HND~GlAvANslaAv~aGA~~V 310 (623)
++=+.+++.+ |.. ++||-+|.= .|.....-..|+..|+.-|
T Consensus 243 ~i~~~i~~~~g~~~~-~vpLVlHGg--SG~~~e~i~~ai~~GV~Ki 285 (358)
T 1dos_A 243 DSQEYVSKKHNLPHN-SLNFVFHGG--SGSTAQEIKDSVSYGVVKM 285 (358)
T ss_dssp HHHHHHHHHHTCCTT-CSCEEECSC--TTCCHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHhCCCCC-CCcEEEeCC--CCCCHHHHHHHHHCCCeEE
Confidence 4444444432 221 377888763 3555555555555555444
Done!