Query 006970
Match_columns 623
No_of_seqs 144 out of 725
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 13:46:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006970.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006970hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ksi_A Copper amine oxidase; P 100.0 2E-171 6E-176 1438.2 68.8 597 21-619 2-642 (642)
2 3sxx_A Peroxisomal primary ami 100.0 1E-171 5E-176 1437.1 63.4 583 21-615 22-664 (692)
3 3loy_A Copper amine oxidase; T 100.0 5E-169 2E-173 1409.1 64.7 572 21-612 1-633 (633)
4 1w6g_A Phenylethylamine oxidas 100.0 2E-165 7E-170 1386.2 59.8 571 21-614 7-629 (646)
5 1spu_A Copper amine oxidase; o 100.0 1E-160 3E-165 1370.4 64.9 582 16-612 87-726 (727)
6 1w7c_A Lysyl oxidase; AMNE oxi 100.0 1E-147 4E-152 1255.0 54.1 563 18-611 15-692 (747)
7 1tu5_A Copper amine oxidase, l 100.0 8E-148 3E-152 1258.1 51.1 568 19-611 38-705 (746)
8 3hi7_A Amiloride-sensitive ami 100.0 2E-137 7E-142 1167.4 58.0 571 21-612 10-694 (731)
9 3pgb_A Putative uncharacterize 100.0 1E-137 4E-142 1170.3 55.3 570 18-611 62-736 (797)
10 2cs7_A Pneumococcal histidine 24.2 27 0.00094 27.0 1.3 26 15-40 28-54 (55)
11 2d0s_A Cytochrome C, cytochrom 22.2 53 0.0018 25.5 2.8 21 22-42 58-78 (79)
12 1cc5_A Cytochrome C5; electron 21.6 53 0.0018 26.3 2.7 17 26-42 67-83 (83)
No 1
>1ksi_A Copper amine oxidase; PEA seedling, oxidoreductase; HET: TPQ NAG; 2.20A {Pisum sativum} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1w2z_A*
Probab=100.00 E-value=1.7e-171 Score=1438.20 Aligned_cols=597 Identities=55% Similarity=1.004 Sum_probs=559.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCC--CCCeEEEEEEccCCChHHhhhhhccC-CCCCCcEEEEEEEeCCeEEEEEEECCC
Q 006970 21 RHPLDSLRPSEFTRVQTIVKTSYP--SNNLSFHYVGMDEPDKAVVYSWLSNS-KTKFPRRAIVIARHNHQTHEIIVDLSK 97 (623)
Q Consensus 21 ~HPldpLs~~Ei~~a~~il~~~~~--~~~~~f~~i~L~EP~K~~vl~~l~~~-~~~p~R~A~vv~~~~~~~~e~vV~L~~ 97 (623)
+|||||||++||++|++||+++.+ ...++|++|+|+||+|++|++||+.. +++|+|+|+|+++.+++++|++|+|++
T Consensus 2 ~HPldpLs~~Ei~~a~~iv~~~~~~~~~~~~F~~i~L~EP~K~~v~~~l~~~~~~~P~R~A~vv~~~~~~~~E~vV~L~~ 81 (642)
T 1ksi_A 2 QHPLDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKDHVLRYETHPTLVSIPRKIFVVAIINSQTHEILINLRI 81 (642)
T ss_dssp CSTTCCCCHHHHHHHHHHHHHHSCTTTCCEEEEEEEECCCCHHHHHHHHHCGGGCCCCCEEEEEEEETTEEEEEEEETTT
T ss_pred CCCCCCCCHHHHHHHHHHHHhcccCCCCceEEEEEECCCCCHHHHHHHHhhcCCCCCCcEEEEEEEeCCeEEEEEEECCC
Confidence 599999999999999999999875 35788999999999999999998533 357899999999999999999999999
Q ss_pred CeEEEEEeecCCCcCCCCHHHHHHHHHHHhcChHHHHHHHhcCCCCCceEEccccccccCCCCCeeEEEEEEEEeeCCCC
Q 006970 98 RSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGLNISDVVCSASTVGWYGEKKSKRVLKFPCFYTDQGTI 177 (623)
Q Consensus 98 ~~v~~~~~~~~~~~p~i~~~E~~~~e~~~~~~p~~~~a~~~~gid~~~v~~d~w~~G~~~~~~~rRl~~~~~~~r~~~~~ 177 (623)
+++++++..+..+||+++.+|+.++|+++++||.|+++|+++||++..|+||||++|+++..++||++|++||++ .+++
T Consensus 82 ~~v~~~~~~~~~g~p~~~~~E~~~~e~~~~~~p~~~~~~~~~gl~~~~v~~~pw~~g~~~~~~~~Rl~~~~~~~~-~~~~ 160 (642)
T 1ksi_A 82 RSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPPFIDSVKKRGLNLSEIVCSSFTMGWFGEEKNVRTVRLDCFMK-ESTV 160 (642)
T ss_dssp TEEEEEEECCSSCBCCCCHHHHHHHTTGGGGCHHHHHHHHHTTCCGGGEEEEEECCCCCSCSCCCCEEEEEEEEC-SSCS
T ss_pred CcEEEEEeccCCCcCCCCHHHHHHHHHHhhcCHHHHHHHHhcCCCccceEEecccccCCCCCCCcEEEEEEEEEe-cCCC
Confidence 999887666655699999999999999999999999999999999999999999999887655799999999999 6689
Q ss_pred CcccCcCCCeEEEEecCCcEEEEEeCCccccCCCCCCCCCCcCCCCCCCCCCCCCceeec-cCCeEEEeceEEEeeceEE
Q 006970 178 NMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVATSS-TRPGFKINGNTVKWANWVF 256 (623)
Q Consensus 178 n~Ya~Pi~gl~~~vD~~~~~vv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkP~~i~q-eG~sf~v~g~~V~W~~W~f 256 (623)
|+|+||||||+++||++++||++|+|.+.+++|+.++.+|+++...+++|+++||++|+| ||+||+|+|++|+||||+|
T Consensus 161 n~Ya~Pl~Gl~~vvD~~~~~V~~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkP~~i~QPeG~sF~V~G~~V~W~~W~f 240 (642)
T 1ksi_A 161 NIYVRPITGITIVADLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKF 240 (642)
T ss_dssp CGGGSEECSEEEEEETTTTEEEEEEECCCCCCCCCTTCCCCSTTCCSCCCCCCCCBEEECTTCCSCEEETTEEEETTEEE
T ss_pred cccccccCceEEEEECCCCEEEEEEccCCccCCCCCCCCccccccCCCCCCCCCCceecCCCCCCEEEeCcEEeeCCceE
Confidence 999999999999999999999999988878888777778998877667899999999999 9999999999999999999
Q ss_pred EEEecCCcceeEEeeEEecCCCCeEeEEEeeeceeeeeeccCCCCCC--------------------------C------
Q 006970 257 NVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEG--------------------------C------ 304 (623)
Q Consensus 257 ~~gf~~reGl~L~dv~~~d~~~~~~r~V~yr~Sl~Em~VpY~dp~~~--------------------------C------ 304 (623)
|||||+||||+||||+|+|.+.|++||||||+|||||+||||||+++ |
T Consensus 241 ~vgf~~reGlvL~dv~y~d~~~g~~r~V~YrlSl~Em~VPYgdP~~~~~~k~~fD~GeyG~G~~a~~L~~GcDCpg~i~Y 320 (642)
T 1ksi_A 241 HIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQF 320 (642)
T ss_dssp EEEEETTTEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEBCCCSTTTTTCEECHHHHHCTTTTBCCCCBTTTBCTTCEE
T ss_pred EEecCCCcccEEEEEEEecCCCCCceEEEEEeeeeeEEEeCCCCCcccccceeeeccccCccccccccccCCCCCCCCEE
Confidence 99999999999999999998888999999999999999999999987 4
Q ss_pred -------CCCccEEecceEEEeeecCCCceeeeeecCCCCe-eeecccceEEEEEEEEEeeccceEEEEEEccCccEEEE
Q 006970 305 -------QDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGH-VREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMG 376 (623)
Q Consensus 305 -------~~G~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~-v~~~r~~~~LVvr~i~TVgNYdYi~~w~F~qDGtIe~~ 376 (623)
.+|+|++++|||||||+| +||||||+++++++. ++.+|++++||||+|+|||||||||+|+|||||+||+|
T Consensus 321 ~D~~~~~~~G~p~~~~naiCihE~d-~gilwkH~~~r~~~~~~~~v~r~r~LVvr~i~TV~NYdYif~w~F~qdG~Ie~e 399 (642)
T 1ksi_A 321 IDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIPNESIEESRTEVNLIVRTIVTVGNADNVIDWEFKASGSIKPS 399 (642)
T ss_dssp EEEEEECTTCCEEEEEEEEEEEEEE-EEEEEEEEECCSTTCCEEEEEEEEEEEEEEEEEETTEEEEEEEEECTTSCEEEE
T ss_pred eeeEEecCCCCEEEcCCEEEEEecc-CCcceeeccccCCCceeeeeeeccEEEEEEEEeecccceEEEEEEecCceEEEE
Confidence 789999999999999999 999999999998753 34455566999999999999999999999999999999
Q ss_pred EEEeeeeeeeeecccccCccccCCccceecCCccccccceeEEeeeeccCCCCCCceEEEEEEEecCCCCCCCcceeEEE
Q 006970 377 VGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSYWTV 456 (623)
Q Consensus 377 v~aTG~l~t~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~~p~~~~~~~ 456 (623)
|+|||||+|+++.+...++.++.+|||+|+|+++|++|||+|+|||||||||.+|||+++|+++++.+.++||++++|++
T Consensus 400 v~aTGil~t~~~~~~~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~~~~~~~~~~~~np~~~~~~~ 479 (642)
T 1ksi_A 400 IALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTT 479 (642)
T ss_dssp EEEEECCCEEECSCCSGGGCCSCCSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEEEECCSSCSSCSEEEEE
T ss_pred EEEEEEEEecccccccccccccCCCcceecCCcccccceEEEEEeeccCCCCCCCeEEEEeeEecCCCCCCCCCcceEEE
Confidence 99999999988765443322357899999999999999999999999999999999999999999987679999999999
Q ss_pred EEEeecchhhhhhcCCCCCcEEEEeCCCCCCCCCCceeEEEccCCcccCCCCCCChhccccccceeeeEEeecCCCCCCC
Q 006970 457 EKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYS 536 (623)
Q Consensus 457 ~~~~l~tE~~a~~~~~~~~r~w~i~N~~~~N~~G~p~gYkl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~a 536 (623)
++++++||+||+++++..+|+|+|+|++++|++|+|+||||+|+++++++++++|+.++||+||+|+||||||+++|+||
T Consensus 480 ~~t~~~tE~ea~~~~~~~~r~~~i~N~~~~N~~G~p~gYkl~p~~~~~~l~~~~s~~~~Ra~fa~~~lwVT~y~d~E~~a 559 (642)
T 1ksi_A 480 ETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWA 559 (642)
T ss_dssp EEEECCBGGGGCBCTTSSCEEEEEEEEEEECTTSCEEEEEEECCSCCCCCSCTTSHHHHHTGGGGCSEEEEECCTTCCCT
T ss_pred EEEEccchhhhhhccCCCceEEEEEcCCCcCCCCCeeeEEEccCCcccccCCCcchhhhhhhccccceEEecCCCCccCC
Confidence 99999999999999998899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCccCCCCCCChhccccCCCceeeCCeEEEEEeccccCCCCCCCCcccceeeeeEEEecCCCCCCCCCCCCCCCCCCC
Q 006970 537 GGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKVIPPKHVQR 616 (623)
Q Consensus 537 sg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P~nFFd~nP~ldvp~~~~~~~ 616 (623)
+|+|+||+++++|+.+|+++||+|+|+|||+|||||+||+||+|||||||++++||+|||+|||++||+||+|++.+++.
T Consensus 560 ~g~y~~qs~~~~gl~~~~~~~~~i~~~DiV~W~t~G~~H~Pr~ED~PvMp~~~~~f~L~P~nFF~~nP~ldvp~~~~~~~ 639 (642)
T 1ksi_A 560 GGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSPRDVAW 639 (642)
T ss_dssp TCSCCBTCCSSSSHHHHGGGCCBCSSBCEEEEEEEEEEECCCGGGSSSCCCEEEECEEEESSCSSSCTTTTCCCCCBCCC
T ss_pred CCCCccCCCCCCChhhhhhCCCccccCCcEEEEecccccCCChhhCCCCccceEEEEEEeCCCCCCCCCccCCCCccCCC
Confidence 99999999998999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 006970 617 PNY 619 (623)
Q Consensus 617 ~~~ 619 (623)
|+|
T Consensus 640 ~~~ 642 (642)
T 1ksi_A 640 PGC 642 (642)
T ss_dssp CCC
T ss_pred CCC
Confidence 988
No 2
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A*
Probab=100.00 E-value=1.5e-171 Score=1437.10 Aligned_cols=583 Identities=27% Similarity=0.464 Sum_probs=544.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCCCeEEEEEEccCCChHHhhhhhccCCCCCCcEEEEEEEe--CCeEEEEEEECCCC
Q 006970 21 RHPLDSLRPSEFTRVQTIVKTSYPSNNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARH--NHQTHEIIVDLSKR 98 (623)
Q Consensus 21 ~HPldpLs~~Ei~~a~~il~~~~~~~~~~f~~i~L~EP~K~~vl~~l~~~~~~p~R~A~vv~~~--~~~~~e~vV~L~~~ 98 (623)
+|||||||++||++|++||+++.++..++|++|+|.||+|++|++|+++..++|+|+|+|+++. +++++|++|||+++
T Consensus 22 ~HPLDpLs~~Ei~~a~~iv~~~~~~~~~~F~~i~L~EP~K~~v~~~~~~~~~~p~R~a~v~~~~~~~~~~~e~vVdl~~~ 101 (692)
T 3sxx_A 22 AHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASL 101 (692)
T ss_dssp SSTTSCCCHHHHHHHHHHHHHHTTTSCEEEEEEEEECCCHHHHHHHHHSCCCCCCCEEEEEEEETTCSSEEEEEEETTTT
T ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCCCcEEEEEECCCCCHHHHHHHHhcCCCCCCeEEEEEEEECCCCCEEEEEEECCCC
Confidence 5999999999999999999998777889999999999999999999988555789999999998 68899999999999
Q ss_pred eEEEEEeecCCCcCCCCHHHHHHHHHHHhcChHHHHHHHhcCC---CCCceEEccccccccCC-CCCeeEEEEEEEEeeC
Q 006970 99 SIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGL---NISDVVCSASTVGWYGE-KKSKRVLKFPCFYTDQ 174 (623)
Q Consensus 99 ~v~~~~~~~~~~~p~i~~~E~~~~e~~~~~~p~~~~a~~~~gi---d~~~v~~d~w~~G~~~~-~~~rRl~~~~~~~r~~ 174 (623)
+|++|+.+++ +||+++.||+.+||++|++||+|+++|++||| +++.|+||||++||++. +.+|||+|++||+|..
T Consensus 102 ~v~~~~~~~~-~~p~~~~ee~~~~e~~~~~~p~~~~a~~~rgl~~~~~~~V~~dpw~~G~~~~~~~~~Rl~~~~~y~r~~ 180 (692)
T 3sxx_A 102 SVIETRALET-VQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSD 180 (692)
T ss_dssp EEEEEEEETT-CCCCCCHHHHHTHHHHHHHCHHHHHHHHHTTCCGGGGGGEEEEEEECCCCTTTTTSSCEEEEEEEECSS
T ss_pred eEEEEEECCC-CcCCcCHHHHHHHHHHHHhCHHHHHHHHHcCCCccccceEEEccccccccCCCCCCceEEEEEEEEecC
Confidence 9999999985 68999999999999999999999999999999 56779999999999876 3479999999999966
Q ss_pred CCCCcccCcCCCeEEEEecCCcEEEEEeCCcc-ccCCCCCCCCCCcCCCC--CCCCC-CCCCceeec-cCCeEEEeceEE
Q 006970 175 GTINMFLRPIEGITIVVDIEEMKVTEYNDREV-APIPKPEPTEYRLSKLK--PPFGP-RLNSVATSS-TRPGFKINGNTV 249 (623)
Q Consensus 175 ~~~n~Ya~Pi~gl~~~vD~~~~~vv~i~d~~~-~~~p~~~~~~y~~~~~~--~~~r~-~lkP~~i~q-eG~sf~v~g~~V 249 (623)
+++|+|||||| |+++||++++||++|++... .|+|+.+..+|+++++. +++|+ |+||++|+| ||+||+|+||+|
T Consensus 181 ~~~N~Ya~Pl~-~~~vvD~~~~~vi~id~~~~~~p~~~~~~~~Y~p~~~~~~~~~r~~d~kP~~i~QPeG~sF~v~g~~V 259 (692)
T 3sxx_A 181 EDDSQYSHPLD-FCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVM 259 (692)
T ss_dssp TTSCGGGCBCS-CEEEEETTTTEEEEEECCSSCCCCCCSCCCCCSHHHHHHHHSSCCCCCCCCEEECTTCCSCEEETTEE
T ss_pred CCCCcccccce-eEEEEECCCCEEEEEecCCCCCCCCCCCCCCCChHHccccCCCCCCCCCCceecCCCCCcEEEcCCeE
Confidence 68999999999 99999999999999998765 56777777899987654 46899 999999999 999999999999
Q ss_pred EeeceEEEEEecCCcceeEEeeEEecCCCCeEeEEEeeeceeeeeeccCCCCCC--------------------------
Q 006970 250 KWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEG-------------------------- 303 (623)
Q Consensus 250 ~W~~W~f~~gf~~reGl~L~dv~~~d~~~~~~r~V~yr~Sl~Em~VpY~dp~~~-------------------------- 303 (623)
+||||+||||||+||||+||||+|+| .|+.||||||+|||||+||||||+++
T Consensus 260 ~W~~W~F~vgf~~reGlvL~dV~y~~--~g~~R~V~YrlSl~Em~VPYgdp~~p~~~k~afD~GeyG~G~~an~L~lGcD 337 (692)
T 3sxx_A 260 EWSNFKFHIGFNYREGIVLSDVSYND--HGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCD 337 (692)
T ss_dssp EETTEEEEEEEETTTEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEBCCCSTTGGGCEECHHHHTCTTTTBCCCTTTTT
T ss_pred EecCcEEEEecCCCCceEEEEEEEcC--CCcceeeeeeeehheeEEecCCCCchhhhheeeeccccCCCccccccccCCC
Confidence 99999999999999999999999999 78999999999999999999999987
Q ss_pred C-------------CCCccEEecceEEEeeecCCCceeeeeecCCC--Ce-eeecccceEEEEEEEEEeeccceEEEEEE
Q 006970 304 C-------------QDGTPVKTPNAVCIFERHAGDVMWRHTEAEMP--GH-VREVRPEVSLVVRMVATVGNYDYIIDWEF 367 (623)
Q Consensus 304 C-------------~~G~p~~~~naiCi~E~d~~g~l~kH~~~~~~--~~-v~~~r~~~~LVvr~i~TVgNYdYi~~w~F 367 (623)
| .+|+|++++|||||||+| .|+||||++++++ .. ++|+| +||||+|+|||||||||+|+|
T Consensus 338 Cpg~i~YlD~~~~~~~G~p~~~~NaICihE~d-~Gil~kHt~~r~~~~~~~v~r~r---~LVvr~i~TVgNYDYif~w~F 413 (692)
T 3sxx_A 338 CKGVIHYLDAHFSDRAGDPITVKNAVCIHEED-DGLLFKHSDFRDNFATSLVTRAT---KLVVSQIFTAANYEYCLYWVF 413 (692)
T ss_dssp SCSSCEEEEEEEECTTSCEEEEEEEEEEEEEE-EEEEEEEECGGGTTCSEEEEEEE---EEEEEEEEEETTEEEEEEEEE
T ss_pred CCCCcEEeeeEEecCCCCEEEecceEEEeecc-CCceEEeeeccCCCceeeEEecc---EEEEEEeeeccceeEEEEEEE
Confidence 5 789999999999999999 5599999999877 55 66666 999999999999999999999
Q ss_pred ccCccEEEEEEEeeeeeeeeecccccCccccCCccceecCCccccccceeEEeeeeccCCCCCCceEEEEEEEecCCC--
Q 006970 368 KPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTN-- 445 (623)
Q Consensus 368 ~qDGtIe~~v~aTG~l~t~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~-- 445 (623)
||||+||+||+|||||+|.+.. .++ .+.+|||+|+|+++|++|||+|+|||||||||.+|||+++|+++++.+.
T Consensus 414 ~qdG~Ie~ev~aTGil~t~~~~---~~~-~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~ 489 (692)
T 3sxx_A 414 MQDGAIRLDIRLTGILNTYILG---DDE-EAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGS 489 (692)
T ss_dssp CTTSCEEEEEEEEECCCCEECC---TTC-CCTTTEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEECSSCTTB
T ss_pred ecCCeEEEEEEEEEEEEeeeeC---CCc-ccCCCcceecCCccccceeEEEEEEeccccCCCCceEEEEEeEEccCCCCC
Confidence 9999999999999999987542 121 1478999999999999999999999999999999999999999998763
Q ss_pred CCCCcceeEEEEEEeecchhhhhhcCCC-CCcEEEEeCCCCCCCC-CCceeEEEccCCcccCCCCCCChhccccccceee
Q 006970 446 VNTPRKSYWTVEKETAKTEFEARLNLDT-KPMEFALVNPSKKTKI-GHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYN 523 (623)
Q Consensus 446 ~~~p~~~~~~~~~~~l~tE~~a~~~~~~-~~r~w~i~N~~~~N~~-G~p~gYkl~p~~~~~~~~~~~s~~~~ra~fa~~~ 523 (623)
+.||++++|++++++++||++|++++++ ++|+|+|+|++++|++ |+|+||||+|++++++|+.++|+..+||+||+|+
T Consensus 490 ~~np~g~~~~~~~t~~~tE~ea~~~~~~~~~R~~~i~N~~~~N~~sG~pvgYkL~p~~~~~ll~~~~s~~~~ra~fa~~~ 569 (692)
T 3sxx_A 490 PENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHS 569 (692)
T ss_dssp TTBTTSCCEEEEEEECCBHHHHCBCCCGGGTCEEEEECTTCCCTTTCSCCEEEEECCCCCCCCSCTTSHHHHHCGGGGSS
T ss_pred CCCCCcceeEEEEEEccchhhhhhccCCCCCcEEEEeCCCCcCCCCCccceEEEecCCCCcccCCCCchhhhhchhcccc
Confidence 3799999999999999999999999999 9999999999999999 9999999999999999999999999999999999
Q ss_pred eEEeecCCCCCCCCCcCccCCCCC--CChhccc-cCCCceeeCCeEEEEEeccccCCCCCCCCcccceeeeeEEEecCCC
Q 006970 524 VWVTPYKKSEKYSGGNYVDQSHGD--DTLLQWT-DGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFF 600 (623)
Q Consensus 524 lwVT~y~~~E~~asg~y~~q~~~~--~~l~~~~-~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P~nFF 600 (623)
||||||+|+|+||||+|+||+.++ .||++|+ ++||+|+|||||+|||||+||+||+|||||||++++||+|||+|||
T Consensus 570 lwVT~y~d~E~~aag~y~nQs~g~p~~gl~~w~~~~~e~I~n~DiV~W~t~G~~HiPr~ED~PvMP~~~~gf~LrP~nFF 649 (692)
T 3sxx_A 570 VNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFF 649 (692)
T ss_dssp EEEEECCTTCCCTTCSSCTTCCSCSSCHHHHHHTTSCSBCSSBCEEEEEEEEEEECCCGGGSSSCCCEEEEEEEEEESSS
T ss_pred eEEecCCCCccCCCCCCccCCCCCCCCChHHHhhcCCceeecCceEEEEecCcccCCchhcCCCCcceEEEEEEECCCcC
Confidence 999999999999999999999887 6899999 8999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCC
Q 006970 601 EYNPVLKVIPPKHVQ 615 (623)
Q Consensus 601 d~nP~ldvp~~~~~~ 615 (623)
++||+||||++.+..
T Consensus 650 d~NPaldvp~~~~~~ 664 (692)
T 3sxx_A 650 TENPGLDIQPSYAMT 664 (692)
T ss_dssp SSCTTTTSCCSEEEC
T ss_pred CCCCcccCCCccccc
Confidence 999999999985543
No 3
>3loy_A Copper amine oxidase; TPQ, oxidoreductase; HET: TPQ TLA; 2.00A {Pichia angusta}
Probab=100.00 E-value=5.3e-169 Score=1409.11 Aligned_cols=572 Identities=24% Similarity=0.416 Sum_probs=532.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCC-CCeEEEEEEccCCChHHhhhhhccC-----CCCCCcEEEEEEEeCCeEEEEEEE
Q 006970 21 RHPLDSLRPSEFTRVQTIVKTSYPS-NNLSFHYVGMDEPDKAVVYSWLSNS-----KTKFPRRAIVIARHNHQTHEIIVD 94 (623)
Q Consensus 21 ~HPldpLs~~Ei~~a~~il~~~~~~-~~~~f~~i~L~EP~K~~vl~~l~~~-----~~~p~R~A~vv~~~~~~~~e~vV~ 94 (623)
.|||||||++||++|++||+++.++ .+++|.+|+|.||+|++|++||+++ .++|+|+|+|+++.+++++|++||
T Consensus 1 ~HPLdpLs~~Ei~~a~~iv~~~~~~~~~~~F~~i~L~EP~K~~v~~~l~~~~~g~~~~~p~R~a~v~~~~~~~~~e~vVd 80 (633)
T 3loy_A 1 VHPYDPISDAELQLTSQLIKDATKGPERPHFIQIDRLDPPKKDMIRYLEAERTGKPLPHISRMTYVYYYIGLDFYKALVN 80 (633)
T ss_dssp CCTTCCCCHHHHHHHHHHHHHHCCSSSCEEEEEEEECCCCHHHHHHHHHHHHHTCCCCCCCCEEEEEEEETTEEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHhhccCCCCcEEEEEECCCCCHHHHHHHHhhhhcCCCCCCCCcEEEEEEEeCCCEEEEEEE
Confidence 5999999999999999999998765 7899999999999999999998642 146789999988778899999999
Q ss_pred CCCCeEEEEEeecCCCcCCCCHHHHHHHHHHHhcChHHHHHHHhcCC-CCCceEEccccccccCCCCCeeEEEEEEEEee
Q 006970 95 LSKRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGL-NISDVVCSASTVGWYGEKKSKRVLKFPCFYTD 173 (623)
Q Consensus 95 L~~~~v~~~~~~~~~~~p~i~~~E~~~~e~~~~~~p~~~~a~~~~gi-d~~~v~~d~w~~G~~~~~~~rRl~~~~~~~r~ 173 (623)
|++++|++++.+++++||+++.||+.+||++|++||+|+++|++||| +++.|+||||++|+++ +++|||+||+||+|.
T Consensus 81 l~~~~v~~~~~~~~~~~p~~~~~e~~~~e~~~~~~p~~~~a~~~~gl~~~~~V~~dpw~~G~d~-~~~~Rl~q~~~y~r~ 159 (633)
T 3loy_A 81 VSYGHIITNQKQPKGVIGPLIAEDIQEIEELATTHPIVKAEIEKLKLPPHVRVVCDPWMNGTDS-KEDRMLIQCYMYLAS 159 (633)
T ss_dssp TTTTEEEEEEECCTTCCCCCCHHHHHHHHHHHTTSHHHHHHHHTTCCCTTEEEEEEEEECCCSS-CCCSCEEEEEEEEEE
T ss_pred CCCCeEEEEEecCCCccCCCCHHHHHHHHHHHHhCHHHHHHHHHcCCCCCceEEEeccccccCC-CCCcEEEEEEEEEec
Confidence 99999999999998789999999999999999999999999999999 6789999999999865 568999999999996
Q ss_pred --CCCCCcccCcCCCeEEEEecCCcEEEEEeCC--cc----c---cCCCCCCCCCCcCCCCCCCCCCCCCceeec-cCCe
Q 006970 174 --QGTINMFLRPIEGITIVVDIEEMKVTEYNDR--EV----A---PIPKPEPTEYRLSKLKPPFGPRLNSVATSS-TRPG 241 (623)
Q Consensus 174 --~~~~n~Ya~Pi~gl~~~vD~~~~~vv~i~d~--~~----~---~~p~~~~~~y~~~~~~~~~r~~lkP~~i~q-eG~s 241 (623)
++++|+|||||+ |+++||++++||++|++. +. . |+++.+..+|+++.+.+ +|+++||++|+| ||+|
T Consensus 160 ~~~~~~N~Ya~Pl~-~~~vvD~~~~~vi~id~~~~g~~~~~~~~~p~~~~~~~~Y~p~~~~~-~r~d~kp~~i~QPeG~s 237 (633)
T 3loy_A 160 AAHPESNHYSLPLK-FSPVFECLTKKFVRMDYLPGGADETVTETQAWDEFPFVEYHPDLNGE-TIVPLKPLIVQQPEGPS 237 (633)
T ss_dssp TTCTTCCGGGSBCS-EEEEEETTTCCEEEEEECCCSSSSCCCSCCCCCCCCCCCCSTTTSCC-CCCCCCCCEEECTTCCS
T ss_pred CCCCCccccccccc-eEEEEECCCCEEEEEEecCcCcccccccccCCCCCCCCCcChhHccc-ccCCCCCcceeCCCCCC
Confidence 568999999998 889999999999999974 11 1 34445568999887654 899999999999 9999
Q ss_pred EEEeceEEEeeceEEEEEecCCcceeEEeeEEecCCCCeEeEEEeeeceeeeeeccCCCCCC------------------
Q 006970 242 FKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEG------------------ 303 (623)
Q Consensus 242 f~v~g~~V~W~~W~f~~gf~~reGl~L~dv~~~d~~~~~~r~V~yr~Sl~Em~VpY~dp~~~------------------ 303 (623)
|+|+|++|+||||+||||||+||||+||||+|+| |||+||+|||||+||||||+++
T Consensus 238 F~v~g~~V~W~~W~f~vgf~~reGlvL~dv~y~g------r~V~YrlSl~Em~VPYgdp~~p~~~k~afD~GeyG~G~~a 311 (633)
T 3loy_A 238 FNVDGHKISWQGWEFFVIPTVREGFAIYDIHFKG------RSVVYRLSLSEMTVPYGDPRAPFHRKQAFDLGDCGFGATG 311 (633)
T ss_dssp EEEETTEEEETTEEEEEEEETTTEEEEEEEEETT------EEEEEEEEEEEEEEEBCCCSTTGGGCEEEHHHHTCTTTTB
T ss_pred EEEcCCccccCCcEEEEecCCCcCcEEEeeEECC------EEEEEEEEeeeEEEeCCCCCChhhhheeecccccCccccc
Confidence 9999999999999999999999999999999998 9999999999999999999987
Q ss_pred --------C-------------CCCccEEecceEEEeeecCCCceeeeeecCCCCe-eeecccceEEEEEEEEEeeccce
Q 006970 304 --------C-------------QDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGH-VREVRPEVSLVVRMVATVGNYDY 361 (623)
Q Consensus 304 --------C-------------~~G~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~-v~~~r~~~~LVvr~i~TVgNYdY 361 (623)
| .+|+|++++|||||||+| .|++|||++++++.. ++|+| +||||+|+|||||||
T Consensus 312 ~~L~~GcDCpg~i~YlD~~~~~~~G~p~~~~naICihE~d-~Gi~~kHt~~r~~~~~v~r~r---~LVvr~i~TVgNYdY 387 (633)
T 3loy_A 312 NSLALGCDCLGVIKYMDCRRVNTNGDSVLIPNTVCLHEQD-GGLLYKHTNYRTNVPVIARRR---EFVVQTIATVANAEY 387 (633)
T ss_dssp CCSTTTTCSCSSEEEEEEEEECTTSCEEEEEEEEEEEEEE-EEEEEEEECTTTCCEEEEEEE---EEEEEEEEEETTEEE
T ss_pred cCCccCCCCCCCcEEeeeEEecCCCCEEEecceEEEEecc-CCceeeeccccCCceeEEEee---EEEEEEEeeccceeE
Confidence 5 789999999999999999 679999999998877 77777 999999999999999
Q ss_pred EEEEEEccCccEEEEEEEeeeeeeeeecccccCccccCCccceecCCccccccceeEEeeeeccCCCCCCceEEEEEEEe
Q 006970 362 IIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTR 441 (623)
Q Consensus 362 i~~w~F~qDGtIe~~v~aTG~l~t~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~ 441 (623)
||+|+|||||+||++|+|||||++.+.. ++++.+|||+|+|+++|++|||+|+|||||||||.+|||+++|++++
T Consensus 388 if~w~F~~dG~Ie~ev~aTGil~t~~~~-----~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~ 462 (633)
T 3loy_A 388 MLNIIFDQAGEIRIHVRATGILSTMPLD-----KDVTVPWGTNVGPRVMAAYHQHMLSFRIDPAVDGYENTVVFDDVIRM 462 (633)
T ss_dssp EEEEEEETTSCEEEEEEEEECCCCEECC-----TTCCCTTEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEEC
T ss_pred EEEEEEecCCeEEEEEEEEEEEeeeecC-----CcccCCCcceecCCccccceeEEEEEEecccccCCCCEEEEEeeeec
Confidence 9999999999999999999999986541 12357899999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceeEEEEEEeecchhhhhhcCCC-CCcEEEEeCCCCCCCC-CCceeEEEccCCcccCCCCCCChhcccccc
Q 006970 442 RNTNVNTPRKSYWTVEKETAKTEFEARLNLDT-KPMEFALVNPSKKTKI-GHPVGYRLLPGSIIGPMLMEDDYPQIRAGF 519 (623)
Q Consensus 442 ~~~~~~~p~~~~~~~~~~~l~tE~~a~~~~~~-~~r~w~i~N~~~~N~~-G~p~gYkl~p~~~~~~~~~~~s~~~~ra~f 519 (623)
+.....||++++|+++++.+++| |++++++ ++|+|+|+|++++|++ |+|+||||+|++++++|+.++|+.++||+|
T Consensus 463 ~~~~~~nP~g~~~~~~~t~l~~e--a~~~~~~~~~r~~~i~N~~~~N~~~G~p~gYkl~p~~~~~ll~~~~s~~~~Ra~f 540 (633)
T 3loy_A 463 EKNTKLNPYNVGFVTERTVVEKP--GYVEQSPFTNRSYKIINENKINPISKKPVAYKIMMPARQMLLADEDSYNNKRAQF 540 (633)
T ss_dssp CSSSSSSTTSCCEEEEEEECCSS--EEECCCGGGTCEEEEEEEEEECTTTCSEEEEEEECCCCCCCCSCSSSHHHHHCGG
T ss_pred CCCCCCCCCCcceEEEEEEeccc--cccccCCCCccEEEEECCCCcCCCCCccceEEEccCCCCcccCCCCchhhhccch
Confidence 87655899999999999999876 7899999 9999999999999995 999999999999999999999999999999
Q ss_pred ceeeeEEeecCCCCCCCCCcCccCCCCCCChhccccCCCceeeCCeEEEEEeccccCCCCCCCCcccceeeeeEEEecCC
Q 006970 520 TNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNF 599 (623)
Q Consensus 520 a~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P~nF 599 (623)
|+|+||||||+|+|+||||+|+||+.+++||++|+++||+|+|||||+|+|||+||+||+|||||||++++||+|||+||
T Consensus 541 a~~~lwVT~y~d~E~~aag~y~nQs~~~~gl~~w~~~~e~i~n~DiV~W~t~G~~HiPr~ED~PvMP~~~~~f~LrP~nF 620 (633)
T 3loy_A 541 ATQQVWVTKYRDNELYAAGEFTNQSQTDTGLGVWARRDENVRNDNPVVWATLGFTHIPRVEDFPVMPVEAHEIALVPFGF 620 (633)
T ss_dssp GGSSEEEEECCTTCCCTTCSCCTTCSSCCSHHHHTTCCCCCTTBCEEEEEEEEEEECCCGGGCSSEEEEEEEEEEEEESS
T ss_pred hhcceEEecCCCCccccCCCCccCCCCCCChHHHhcCCCccccCceEEEEecCcccCCCcccCCCCccceeeEEEEcCCc
Confidence 99999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCC
Q 006970 600 FEYNPVLKVIPPK 612 (623)
Q Consensus 600 Fd~nP~ldvp~~~ 612 (623)
|++||+|||||++
T Consensus 621 Fd~nP~ldvp~s~ 633 (633)
T 3loy_A 621 FDKNPALSVPQST 633 (633)
T ss_dssp SSSCGGGGSCCCC
T ss_pred CCCCccccCCCCC
Confidence 9999999999974
No 4
>1w6g_A Phenylethylamine oxidase; copper containing, metal-binding, oxidoreductase, TPQ, quinone, holoenzyme; HET: TPQ GOL; 1.55A {Arthrobacter globiformis} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1w6c_A* 1rjo_A* 2bt3_A* 2cfd_A* 2cfg_A* 2cfk_A* 2cfl_A* 2cfw_A* 2cg0_A* 2cg1_A* 1w4n_A* 1sih_A* 1sii_A* 1w5z_A* 3kii_A* 3kn4_A* 1iqy_A* 1avl_A* 1av4_A* 1iqx_A* ...
Probab=100.00 E-value=2.1e-165 Score=1386.18 Aligned_cols=571 Identities=26% Similarity=0.467 Sum_probs=531.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCC-CCCeEEEEEEccCCChHHhhhhhccCCCCCCcEEEEEEEe--CCeEEEEEEECCC
Q 006970 21 RHPLDSLRPSEFTRVQTIVKTSYP-SNNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARH--NHQTHEIIVDLSK 97 (623)
Q Consensus 21 ~HPldpLs~~Ei~~a~~il~~~~~-~~~~~f~~i~L~EP~K~~vl~~l~~~~~~p~R~A~vv~~~--~~~~~e~vV~L~~ 97 (623)
+|||||||++||++|++||+++.+ ..+++|++|+|+||+|++ ++++|+|+|+|+++. +++++|++|+|++
T Consensus 7 ~HPldpLs~~Ei~~a~~iv~~~~~~~~~~~F~~i~L~eP~K~~-------g~~~P~R~A~vv~~~~~~~~~~E~vV~L~~ 79 (646)
T 1w6g_A 7 ASPFRLASAGEISEVQGILRTAGLLGPEKRIAYLGVLDPARGA-------GSEAEDRRFRVFIHDVSGARPQEVTVSVTN 79 (646)
T ss_dssp CCTTCCCCHHHHHHHHHHHHHTTCCCTTEEEEEEEECCCCSCC-------SSSCCCCEEEEEEEETTSCCCEEEEEETTT
T ss_pred CCCCCCCCHHHHHHHHHHHHhcccCCCCcEEEEEEccCCchhh-------CCCCCCeEEEEEEEECCCCcEEEEEEECCC
Confidence 799999999999999999999876 678999999999999999 234689999999988 5789999999999
Q ss_pred CeEEE---EEeecCCCcCCCCHHHHHHHHHHHhcChHHHHHHHhcCC-CCCceEEccccccccCC--CCCeeEEEEEEEE
Q 006970 98 RSIVS---DKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGL-NISDVVCSASTVGWYGE--KKSKRVLKFPCFY 171 (623)
Q Consensus 98 ~~v~~---~~~~~~~~~p~i~~~E~~~~e~~~~~~p~~~~a~~~~gi-d~~~v~~d~w~~G~~~~--~~~rRl~~~~~~~ 171 (623)
++|++ ++.++ ++||+++.+|+.++|++|+++|+|+++|+++|| +++.|+| ||++||+++ +.+||++|++||+
T Consensus 80 ~~v~~~~~~~~~~-~~~~~~~~~E~~~~e~~~~~~p~~~~~i~~~gl~~~~~v~~-pw~~g~~~~~~~~~~Rl~~~~~~~ 157 (646)
T 1w6g_A 80 GTVISAVELDTAA-TGELPVLEEEFEVVEQLLATDERWLKALAARNLDVSKVRVA-PLSAGVFEYAEERGRRILRGLAFV 157 (646)
T ss_dssp TEEEEEEECCHHH-HCBCCCCHHHHHHHHHHHTTCHHHHHHHHHTTCCGGGEEEE-EEECCCCSCGGGTTSCEEEEEEEE
T ss_pred CeEEecccceeCC-CccCCCCHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCeeEE-eecccccCCccCCCcEEEEEEEEE
Confidence 99998 77777 469999999999999999999999999999999 5677999 999998766 2479999999999
Q ss_pred eeCCCCCcccCcCCCeEEEEecCCcEEEEEeCCccccCCCCCCCCCCcCCCCCCCCCCCCCceeec-cCCeEEEe-ceEE
Q 006970 172 TDQGTINMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVATSS-TRPGFKIN-GNTV 249 (623)
Q Consensus 172 r~~~~~n~Ya~Pi~gl~~~vD~~~~~vv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkP~~i~q-eG~sf~v~-g~~V 249 (623)
|..+++|+|+|||+||+++||++++||++|++.+.++.|. +..+|.++.+.+++|+++||++|+| ||+||+|+ |++|
T Consensus 158 r~~~~~n~Ya~Pl~gl~~vvD~~~~~Vi~v~~~~~~~~p~-~~~~y~~~~~~~~~r~~lkP~~i~QPeGpsF~V~~G~~V 236 (646)
T 1w6g_A 158 QDFPEDSAWAHPVDGLVAYVDVVSKEVTRVIDTGVFPVPA-EHGNYTDPELTGPLRTTQKPISITQPEGPSFTVTGGNHI 236 (646)
T ss_dssp CSSTTCCGGGSBCTTEEEEEETTTTEEEEEEECCCCCCCC-SCCCTTCHHHHCSCCCCCCCCCCCCTTCCSCEEETTTEE
T ss_pred ecCCCCCccccccCceEEEEECCCCEEEEEEeCCccCCCC-CCCccchhhcCCCcCCCCCCceecCCCCCceEEeCCCEE
Confidence 9666889999999999999999999999999887666664 4569988765556899999999999 99999999 9999
Q ss_pred EeeceEEEEEecCCcceeEEeeEEecCCCCeEeEEEeeeceeeeeeccCCCCCC--------------------------
Q 006970 250 KWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEG-------------------------- 303 (623)
Q Consensus 250 ~W~~W~f~~gf~~reGl~L~dv~~~d~~~~~~r~V~yr~Sl~Em~VpY~dp~~~-------------------------- 303 (623)
+||||+||||||+||||+||||+|+| .|+.||||||+|||||+||||||+++
T Consensus 237 ~W~~W~F~vgfn~ReGlvL~dV~y~~--~g~~R~V~YrlSlsEm~VPYgdp~p~~~~k~afD~GeyG~G~~an~L~lGcD 314 (646)
T 1w6g_A 237 EWEKWSLDVGFDVREGVVLHNIAFRD--GDRLRPIINRASIAEMVVPYGDPSPIRSWQNYFDTGEYLVGQYANSLELGCD 314 (646)
T ss_dssp EETTEEEEEEEETTTEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEBCCCCTTTTTCEEECCCCCCGGGGBCCCCBTTT
T ss_pred EeCCCEEEEecCCCcceEEEEEEEcC--CCCceEEEEEeeeeEEEEeCCCCCchhhcceeeeccCcCCcccccccccCCC
Confidence 99999999999999999999999999 67899999999999999999999987
Q ss_pred C-------------CCCccEEecceEEEeeecCCCceeeeeecCCCCe-eeecccceEEEEEEEEEeeccceEEEEEEcc
Q 006970 304 C-------------QDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGH-VREVRPEVSLVVRMVATVGNYDYIIDWEFKP 369 (623)
Q Consensus 304 C-------------~~G~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~-v~~~r~~~~LVvr~i~TVgNYdYi~~w~F~q 369 (623)
| .+|+|++++|||||||+|+ ||||||++++++.. ++|+| +||||+|+|||||||||+|+|||
T Consensus 315 Cpg~i~Y~D~~~~~~~G~p~~~~naICihE~d~-GilwkH~~~r~~~~~v~r~r---~LVvr~i~Tv~NYdYi~~w~F~~ 390 (646)
T 1w6g_A 315 CLGDITYLSPVISDAFGNPREIRNGICMHEEDW-GILAKHSDLWSGINYTRRNR---RMVISFFTTIGNADYGFYWYLYL 390 (646)
T ss_dssp BCSSCEEECCEEECTTSCEEECTTCEEEEEEEE-EEEEEEECTTTCCEEEEEEE---EEEEEEEEEETTEEEEEEEEEET
T ss_pred CCCCCEEEeEEEEcCCCCEEEcCCEEEEeeccC-CcceeeecccCCceeeeccc---EEEEEEEeeccccceEEEEEEec
Confidence 4 7899999999999999995 59999999998766 66666 99999999999999999999999
Q ss_pred CccEEEEEEEeeeeeeeeecccccCccccCCccceecCCccccccceeEEeeeeccCCCCCCceEEEEEEEecCCCCCCC
Q 006970 370 SGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTP 449 (623)
Q Consensus 370 DGtIe~~v~aTG~l~t~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~~p 449 (623)
||+||++|+|||||+|+++.. ++.+|||+|+|+++|++|||+|+|||||||||.+|||+++|+++++.+ +.||
T Consensus 391 dG~Ie~ev~aTGil~t~~~~~------~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~-~~np 463 (646)
T 1w6g_A 391 DGTIEFEAKATGVVFTSAFPE------GGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVEEEDVVRQTMG-PGNE 463 (646)
T ss_dssp TSCEEEEEEEEECCCCEECCT------TCCSSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEECCSB-TTBT
T ss_pred CCeEEEEEEEEEEEeeeecCC------ccCCCcceecCCcccccceEEEEEeecccccCCCCEEEEEeeEeccCC-CCCC
Confidence 999999999999999876422 257899999999999999999999999999999999999999999875 5899
Q ss_pred cceeEEEEEEeecchhhhhhcCCC-CCcEEEEeCCCCCCCCCCceeEEEccCCcccCCCCCCChhccccccceeeeEEee
Q 006970 450 RKSYWTVEKETAKTEFEARLNLDT-KPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTP 528 (623)
Q Consensus 450 ~~~~~~~~~~~l~tE~~a~~~~~~-~~r~w~i~N~~~~N~~G~p~gYkl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~ 528 (623)
++++|+++++++++|+||+++++. ++|+|+|+|++++|++|+|+||||+|++++.++++++|+..+||+|++|+|||||
T Consensus 464 ~~~~~~~~~t~~~tE~ea~~~~~~~~~r~~~i~N~~~~N~~G~p~gYkl~~~~~~~~l~~~~s~~~~ra~fa~~~lwVT~ 543 (646)
T 1w6g_A 464 RGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIARRAAFATKDLWVTR 543 (646)
T ss_dssp TSCCEEEEEEEECBGGGCEECCCGGGTCEEEEEEEEEECTTSCEEEEEEEECCCCCCCSCTTSHHHHHTGGGGSSEEEEE
T ss_pred CCceeEEEEEEccchhhhhhccCCCCCcEEEEeCCCCcCCCCCeeeEEEccCCcccccCCCCccccccccccccceEEec
Confidence 999999999999999999999999 8999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcCccCCCCCCChhccccCCCceeeCCeEEEEEeccccCCCCCCCCcccceeeeeEEEecCCCCCCCCCCC
Q 006970 529 YKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKV 608 (623)
Q Consensus 529 y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P~nFFd~nP~ldv 608 (623)
|+|+|+||+|+|+||+.++++|++|+++||+|+|+|||+|||||+||+||+|||||||++++||+|||+|||++||+||+
T Consensus 544 y~d~E~~aag~y~nQs~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~PvMP~~~~~f~L~P~nFF~~nP~ldv 623 (646)
T 1w6g_A 544 YADDERYPTGDFVNQHSGGAGLPSYIAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGFFDRSPVLDV 623 (646)
T ss_dssp CCTTCCCTTCSCCBTCCSSSSHHHHHTTCCBCTTBCEEEEEEEEEEECCCGGGSSSEEEEEEEEEEEESSCSSSCTTTTC
T ss_pred cCCCccccCCCCcccCCCCCChhHHhhCCCCcccCceEEEEeCccccCCCccccCCCCCceEEEEEEecCcCCCCCCccC
Confidence 99999999999999999989999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 006970 609 IPPKHV 614 (623)
Q Consensus 609 p~~~~~ 614 (623)
|++.++
T Consensus 624 p~~~~~ 629 (646)
T 1w6g_A 624 PANPSQ 629 (646)
T ss_dssp CCC---
T ss_pred CCcccc
Confidence 999876
No 5
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A*
Probab=100.00 E-value=1e-160 Score=1370.43 Aligned_cols=582 Identities=32% Similarity=0.583 Sum_probs=530.2
Q ss_pred cCCCC-CCCCCCCCHHHHHHHHHHHHhcCC-CCCeEEEEEEccCCChHHhhhhhccCC-CCCCcEEEEEEEeCCeEEEEE
Q 006970 16 ISSSK-RHPLDSLRPSEFTRVQTIVKTSYP-SNNLSFHYVGMDEPDKAVVYSWLSNSK-TKFPRRAIVIARHNHQTHEII 92 (623)
Q Consensus 16 ~~~~~-~HPldpLs~~Ei~~a~~il~~~~~-~~~~~f~~i~L~EP~K~~vl~~l~~~~-~~p~R~A~vv~~~~~~~~e~v 92 (623)
++++. +|||||||++||++|+++|+++.. .++++|.+|+|+||+|++||+|+..+. ++|+|+|+|+++.+++++|++
T Consensus 87 ~~~~~~~HPLdpLs~~Ei~~a~~il~~~~~~~~~~~F~~i~L~eP~K~~vl~~~~~~~~~~p~R~A~vv~~~~~~~~e~v 166 (727)
T 1spu_A 87 FQVEKRPHPLNALTADEIKQAVEIVKASADFKPNTRFTEISLLPPDKEAVWAFALENKPVDQPRKADVIMLDGKHIIEAV 166 (727)
T ss_dssp EECCSSCCTTCCCCHHHHHHHHHHHHTSTTCCTTCEEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEEETTEEEEEE
T ss_pred EeecccCCCCCcCCHHHHHHHHHHHHhcccCCCCcEEEEEEecCCCHHHHHhHHhcCCCCCCCeEEEEEEEeCCeEEEEE
Confidence 44445 899999999999999999998864 578899999999999999999965443 468999999999999999999
Q ss_pred EECCCCeEEEEEeecCCCcCCCCHHHHHHHHHHHhcChHHHHHHHhcCC-CCCceEEccccccccCC-C---CCeeEEEE
Q 006970 93 VDLSKRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGL-NISDVVCSASTVGWYGE-K---KSKRVLKF 167 (623)
Q Consensus 93 V~L~~~~v~~~~~~~~~~~p~i~~~E~~~~e~~~~~~p~~~~a~~~~gi-d~~~v~~d~w~~G~~~~-~---~~rRl~~~ 167 (623)
|+|+.+++++++.++ ++||+++.+|+.++|++|+++|.|+++|+++|| ++..|+||||++|+++. . ++||++|+
T Consensus 167 V~l~~~~v~~~~~~~-~~~~~~~~~e~~~~e~~~~~~p~~~~~~~~~gl~~~~~v~~dpw~~g~~~~~~~~~~~~R~~~~ 245 (727)
T 1spu_A 167 VDLQNNKLLSWQPIK-DAHGMVLLDDFASVQNIINNSEEFAAAVKKRGITDAKKVITTPLTVGYFDGKDGLKQDARLLKV 245 (727)
T ss_dssp EETTTTEEEEEEEET-TCCCCCCHHHHHHHHHHHHHCHHHHHHHHHTTCSCTTSEEEEEECCCCCTTTTCCCSSSCEEEE
T ss_pred EeCCCCceEEEEeCC-CcCCCCCHHHHHHHHHHHHhCHHHHHHHHHhCCCccceEEEccccccccCCCCCCCCCcEEEEE
Confidence 999999999998888 469999999999999999999999999999999 79999999999998763 2 36999999
Q ss_pred EEEEeeCCCCCcccCcCCCeEEEEecCCcEEEEEeCCccccCCCCCCCCCCcCCCCCCCCCCCCCceeec-cCCeEEEec
Q 006970 168 PCFYTDQGTINMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVATSS-TRPGFKING 246 (623)
Q Consensus 168 ~~~~r~~~~~n~Ya~Pi~gl~~~vD~~~~~vv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkP~~i~q-eG~sf~v~g 246 (623)
+||+. .+++|+|+|||+||+++||++++||++|++.+.+++|... .+|.++. ++|+++||++|+| ||+||+|+|
T Consensus 246 ~~~~~-~~~~n~Ya~Pl~g~~~vvD~~~~~V~~i~~~~~~~~p~~~-~~y~~~~---~~r~~lkP~~i~QPeG~sF~v~g 320 (727)
T 1spu_A 246 ISYLD-VGDGNYWAHPIENLVAVVDLEQKKIVKIEEGPVVPVPMTA-RPFDGRD---RVAPAVKPMQIIEPEGKNYTITG 320 (727)
T ss_dssp EEEEC-CSSSCGGGSBCTTEEEEEETTTTEEEEEEECCCCCCCCSC-CCSSSTT---EECCCCCCCEEECTTCCSEEEET
T ss_pred EEEEE-CCCCCccccCccceEEEEecccCEEEEEEcCCccccCCCC-CCccccc---cccCCCCCccccCCCCCCEEECC
Confidence 99986 6679999999999999999999999999988776666543 5788764 4699999999999 999999999
Q ss_pred eEEEeeceEEEEEecCCcceeEEeeEEecCCCCeEeEEEeeeceeeeeeccCCCCCC-----------------------
Q 006970 247 NTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEG----------------------- 303 (623)
Q Consensus 247 ~~V~W~~W~f~~gf~~reGl~L~dv~~~d~~~~~~r~V~yr~Sl~Em~VpY~dp~~~----------------------- 303 (623)
++|+||||+||||||+||||+||||+|+| .|+.||||||+|||||+||||||+++
T Consensus 321 ~~V~W~~W~F~vgf~~reGlvL~dV~y~~--~g~~r~V~YrlSl~Em~VPYgdp~~~~~~k~~fD~GeyG~G~~a~~L~l 398 (727)
T 1spu_A 321 DMIHWRNWDFHLSMNSRVGPMISTVTYND--NGTKRKVMYEGSLGGMIVPYGDPDIGWYFKAYLDSGDYGMGTLTSPIAR 398 (727)
T ss_dssp TEEEETTEEEEEEEETTTEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEBCCCSTTTTTCEECHHHHHCTTTTBCCCCT
T ss_pred CccccCCcEEEEecCCCCceEEEEEEEcC--CCceEEEEEEeEeeEEEEeCCCCCCchhcceeeeccCcCCccccccccc
Confidence 99999999999999999999999999999 67899999999999999999999987
Q ss_pred ---C-------------CCCccEEecceEEEeeecCCCceeeeeecCCCCeeeecccceEEEEEEEEEeeccceEEEEEE
Q 006970 304 ---C-------------QDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEF 367 (623)
Q Consensus 304 ---C-------------~~G~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~v~~~r~~~~LVvr~i~TVgNYdYi~~w~F 367 (623)
| .+|+|++++|||||||+|+ ||||||++++....++++| +||||+|+|||||||||+|+|
T Consensus 399 GcDCpg~i~Y~D~~~~~~~G~p~~~~naiCi~E~d~-G~l~kH~~~~~~~~~~r~r---~LVv~~i~Tv~NYdYi~~w~F 474 (727)
T 1spu_A 399 GKDAPSNAVLLNETIADYTGVPMEIPRAIAVFERYA-GPEYKHQEMGQPNVSTERR---ELVVRWISTVGNYDYIFDWIF 474 (727)
T ss_dssp TTTSCTTCEEEEEEEECTTSCEEEEEEEEEEEEEEE-EEEEEECCTTSCCEEEEEE---EEEEEEEEEETTEEEEEEEEE
T ss_pred CCCCCCCCEEeeeEEEcCCCCEEEeCCeEEEecccC-CcceeeeccCCCceeeece---EEEEEEEEeecccceEEEEEE
Confidence 5 7899999999999999995 6999999998543355555 999999999999999999999
Q ss_pred ccCccEEEEEEEeeeeeeeeecccccCcc---ccCCccceecCCccccccceeEEeeeeccCCCCCCceEEEEEEEecCC
Q 006970 368 KPSGSIKMGVGLSGVLEVKPVEYTYVDQI---KEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNT 444 (623)
Q Consensus 368 ~qDGtIe~~v~aTG~l~t~~~~~~~~~~~---~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~ 444 (623)
||||+||++|+|||||+|+++.+....+. ++.+|||+|+|+++|++|||+|+|||||||||.+|||+++|+++++.+
T Consensus 475 ~~dG~I~~ev~aTGil~~~~~~~t~~~~~~~~~~~~yGt~v~~~~~a~~HqH~f~~RlD~dVdG~~Nsv~~~d~~~~~~~ 554 (727)
T 1spu_A 475 HENGTIGIDAGATGIEAVKGVKAKTMHDETAKDDTRYGTLIDHNIVGTTHQHIYNFRLDLDVDGENNSLVAMDPVVKPNT 554 (727)
T ss_dssp ETTSCEEEEEEEEECCCEEECSCSSTTSTTHHHHTTTEEEEETTEEEECEEEEEEEEEEECTTSSEEEEEEEEEEEEECC
T ss_pred ecCceEEEEEEEEEEEEeccccccccccccccccCCCcceecCCcccccceeEEEEeecccccCCCCeEEEEeeEEccCC
Confidence 99999999999999999876432111111 236899999999999999999999999999999999999999998865
Q ss_pred CCCCCcceeEEEEEEeecchhhhhhcCCC-CCcEEEEeCCCCCCCCCCceeEEEcc--CCc----ccCCCCCCChhcccc
Q 006970 445 NVNTPRKSYWTVEKETAKTEFEARLNLDT-KPMEFALVNPSKKTKIGHPVGYRLLP--GSI----IGPMLMEDDYPQIRA 517 (623)
Q Consensus 445 ~~~~p~~~~~~~~~~~l~tE~~a~~~~~~-~~r~w~i~N~~~~N~~G~p~gYkl~p--~~~----~~~~~~~~s~~~~ra 517 (623)
+.||++++|++++++++||++|++++++ ++|+ |+|++++|++|+|+||||+| +.+ +++++.++|+.++||
T Consensus 555 -~~np~~~~~~~~~t~~~tE~~a~~~~~~~~~r~--i~n~~~~N~~G~p~gYkl~~~~~~~~~~~~~~l~~~~s~~~~ra 631 (727)
T 1spu_A 555 -AGGPRTSTMQVNQYNIGNEQDAAQKFDPGTIRL--LSNPNKENRMGNPVSYQIIPYAGGTHPVAKGAQFAPDEWIYHRL 631 (727)
T ss_dssp -SCSSCSEEEEEEEEEECBHHHHSBCCCTTSEEE--EEEEEEECTTSCEEEEEEEEEEEESSCBCCSCSSCTTCHHHHHC
T ss_pred -CCCCCCceeEEEEEEccchhhhhhccCCCCcEE--EeCCCCcCCCCCeeeEEEecCCCCccccccccccCCcchhhhhh
Confidence 3699999999999999999999999999 7887 99999999999999999999 333 568899999999999
Q ss_pred ccceeeeEEeecCCCCCCCCCcCccCCCCCCChhccccCCCceeeCCeEEEEEeccccCCCCCCCCcccceeeeeEEEec
Q 006970 518 GFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPT 597 (623)
Q Consensus 518 ~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P~ 597 (623)
+||+|+||||||+|+|+||+|+|++|+++++||++|+++||+|+|+|||+|||||+||+||+|||||||++++||+|||+
T Consensus 632 ~fa~~~lwVT~y~d~E~~a~g~y~~q~~~~~gl~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P~ 711 (727)
T 1spu_A 632 SFMDKQLWVTRYHPGERFPEGKYPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHVARAEEWPIMPTEWVHTLLKPW 711 (727)
T ss_dssp GGGGCSEEEEECCTTCCCTTCSCCTTCSSCCSHHHHHTTCCBCSSEEEEEEEEEEEEECCCGGGSSSEEEEEEEEEEEEE
T ss_pred cccccceEEeccCCcccCCCCCCccCCCCCCCHHHHhhCCCccccCCcEEEEecccccCCChhhCCCCcccEEEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCC
Q 006970 598 NFFEYNPVLKVIPPK 612 (623)
Q Consensus 598 nFFd~nP~ldvp~~~ 612 (623)
|||++||+||+||+.
T Consensus 712 nFFd~nPaldvp~~~ 726 (727)
T 1spu_A 712 NFFDETPTLGALKKD 726 (727)
T ss_dssp SSSSSCTTSCCBC--
T ss_pred CCCCCCCCcCCCCCC
Confidence 999999999999874
No 6
>1w7c_A Lysyl oxidase; AMNE oxidase, copper, oxidoreductase, quinoprotein, topaquinone enzyme, TPQ; HET: BMA NAG TPQ IMD; 1.23A {Pichia pastoris} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1rky_A* 1n9e_A*
Probab=100.00 E-value=1.2e-147 Score=1254.98 Aligned_cols=563 Identities=18% Similarity=0.281 Sum_probs=492.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcC-CC-------CCeEEEEEEccCCChHHhhhhhccCCCCCCcEEEEEEEeC----
Q 006970 18 SSKRHPLDSLRPSEFTRVQTIVKTSY-PS-------NNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHN---- 85 (623)
Q Consensus 18 ~~~~HPldpLs~~Ei~~a~~il~~~~-~~-------~~~~f~~i~L~EP~K~~vl~~l~~~~~~p~R~A~vv~~~~---- 85 (623)
+.++|||||||++||++|+++|+++. +. .++.|++|+|+||+|++||+||++++++|+|+|+|+++++
T Consensus 15 ~~~~~p~~~Ls~~E~~aV~~~L~~~l~l~~~~~~~~~dN~i~~VeL~~P~K~~vL~~Ld~~g~~P~R~A~vv~~~~~~~~ 94 (747)
T 1w7c_A 15 APKTNIWTSLAKEEVQEVLDLLHSTYNITEVTKADFFSNYVLWIETLKPNKTEALTYLDEDGDLPPRNARTVVYFGEGEE 94 (747)
T ss_dssp CSSCCTTCCCCHHHHHHHHHHHHHHSCCCCGGGCCTTSEEEEEEEEECCCHHHHHHHHHSCCCCCCCEEEEEEEECSSSS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhccCCCccccCccccceEEEEECcCCCHHHHHhHhhCCCCCCCceEEEEEEeCCCCC
Confidence 45589999999999999999999883 22 4669999999999999999999998878899999999875
Q ss_pred CeEEEEEEE-CCCCeEEEEEeec---CC---CcC----CCCHHHHHHHHHHHhcChHHHHHH------HhcC-CCCCceE
Q 006970 86 HQTHEIIVD-LSKRSIVSDKVYT---GH---GFP----LLTLEEQHAGAALVLAYEPFKASV------KKRG-LNISDVV 147 (623)
Q Consensus 86 ~~~~e~vV~-L~~~~v~~~~~~~---~~---~~p----~i~~~E~~~~e~~~~~~p~~~~a~------~~~g-id~~~v~ 147 (623)
+.++|++|+ |+.+++++++.++ +. .+| +++.+|+.+++++|+ .+++++ +++| +....
T Consensus 95 ~~~~E~vV~PL~~~~v~~~~~~~~~~~~g~~~~p~~~r~~~~~E~~~~e~~~~---~~~~~~~~~~l~~~~g~~~~~~-- 169 (747)
T 1w7c_A 95 GYFEELKVGPLPVSDETTIEPLSFYNTNGKSKLPFEVGHLDRIKSAAKSSFLN---KNLNTTIMRDVLEGLIGVPYED-- 169 (747)
T ss_dssp CEEEEEEEESSSCCTTCEEEECCTTCTTCCSEEEGGGCCCCHHHHHHHHHHHH---HHHTSHHHHHHHHHHHSSCGGG--
T ss_pred CceEEEEEcCCCCCcEEEEEeccccCCCCcccCCcccCCCCHHHHHHHHHHHH---HHHHHHhhccchhhcCCcccce--
Confidence 567899999 9999997777763 33 468 899999999999998 666666 6688 74443
Q ss_pred Ecccccccc--CCCCCeeEEEEEEEEeeCCCCCcccCcCCCeEEEEecC-----CcEEEEEeCCc---------------
Q 006970 148 CSASTVGWY--GEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDIE-----EMKVTEYNDRE--------------- 205 (623)
Q Consensus 148 ~d~w~~G~~--~~~~~rRl~~~~~~~r~~~~~n~Ya~Pi~gl~~~vD~~-----~~~vv~i~d~~--------------- 205 (623)
|++|++|.. +..++||++|++||....+ +|+|+||| ||+++||++ +|||++|++.+
T Consensus 170 l~~w~~~~~~~~~~~g~R~~~~~~~r~~~~-~n~Y~~Pl-g~~~~vD~~~~D~~~~~V~~v~~~g~~~~s~~el~~~~~~ 247 (747)
T 1w7c_A 170 MGCHSAAPQLHDPATGATVDYGTCNINTEN-DAENLVPT-GFFFKFDMTGRDVSQWKMLEYIYNNKVYTSAEELYEAMQK 247 (747)
T ss_dssp EEEEECSSCEECTTTCCEEEEEEEEECCSS-SCGGGCEE-EEEEEEECCSSCGGGCEEEEEEETTEEESSHHHHHHHHHS
T ss_pred eeeecccCCcCCCCCCceEEEEEEEEecCC-CCccccce-eeEEEEeCCCCCcccCEEEEEEECCcccCchhhhhhhhcc
Confidence 888987743 3335799999999754334 89999999 799999997 59999996553
Q ss_pred --cc---cCCCCCCCCC---CcCCCC-C--CCCCCCCCceeec-cCCeEEEeceE--EEeeceEEEEEecCCcceeEEee
Q 006970 206 --VA---PIPKPEPTEY---RLSKLK-P--PFGPRLNSVATSS-TRPGFKINGNT--VKWANWVFNVGFDARVGTIISTA 271 (623)
Q Consensus 206 --~~---~~p~~~~~~y---~~~~~~-~--~~r~~lkP~~i~q-eG~sf~v~g~~--V~W~~W~f~~gf~~reGl~L~dv 271 (623)
.+ ++|. .+| .++... + +.|+++||++|+| ||+||+|+|+. |+||||+||||||+||||+||||
T Consensus 248 ~g~v~~~~~p~---~~~~~~~~~~~~~g~~~~r~~lkp~~i~QPeG~sF~v~g~~~yV~W~~W~f~vgf~~reGlvL~dv 324 (747)
T 1w7c_A 248 DDFVTLPKIDV---DNLDWTVIQRNDSAPVRHLDDRKSPRLVEPEGRRWAYDGDEEYFSWMDWGFYTSWSRDTGISFYDI 324 (747)
T ss_dssp TTCCCCCCCCT---TCCGGGCCSCCTTSCCCTTTTSCCCCCCCTTCCCCEEETTTTEEEETTEEEEEEEETTTEEEEEEE
T ss_pred cCcccccccCC---CCCcccchhhcccCCCCcccCCCCCcccCCCCCCEEEeCCccceeccCCeEEEecCCCCceEEEee
Confidence 11 2331 232 222322 2 4689999999999 99999999999 99999999999999999999999
Q ss_pred EEecCCCCeEeEEEeeeceeeeeeccCCCCCC------------------------C------------CCCccEEecce
Q 006970 272 SIYDINMHKYRRVLYRGFISELFIPYQDPSEG------------------------C------------QDGTPVKTPNA 315 (623)
Q Consensus 272 ~~~d~~~~~~r~V~yr~Sl~Em~VpY~dp~~~------------------------C------------~~G~p~~~~na 315 (623)
+|+| |||+||+|||||+||||||++. | .+|+|++++||
T Consensus 325 ~y~g------r~V~YrlSl~Em~VPYgdp~p~~~~~~~~D~gyG~G~a~~L~~GcDCpg~i~Y~D~~~~~~G~p~~~~na 398 (747)
T 1w7c_A 325 TFKG------ERIVYELSLQELIAEYGSDDPFNQHTFYSDISYGVGNRFSLVPGYDCPSTAGYFTTDTFEYDEFYNRTLS 398 (747)
T ss_dssp EETT------EEEEEEEEEEEEEEEECCSSTTGGGCEEEHHHHCSSSSCCCCBTTTBCTTCEEEEEEEEETTEEEEEEEE
T ss_pred eECC------EEEEEEEEeeeEEeccCCCCchhheeeeeccccCcccccccccCCCCCCCCEEeeeEEecCCCeEEcCce
Confidence 9987 9999999999999999999764 5 57899999999
Q ss_pred EEEeeecCCCceeeeeecCCCCe-eeecccceEEEEEEEEEeeccceEEEEEEccCccEEEEEEEeeeeeeeeecccccC
Q 006970 316 VCIFERHAGDVMWRHTEAEMPGH-VREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVD 394 (623)
Q Consensus 316 iCi~E~d~~g~l~kH~~~~~~~~-v~~~r~~~~LVvr~i~TVgNYdYi~~w~F~qDGtIe~~v~aTG~l~t~~~~~~~~~ 394 (623)
|||||+|+|.|||||+++ +.. ++|+| +||||+|+|||||||||+|+|||||+||++|+|||||++... . .+
T Consensus 399 iCihE~d~G~pl~kH~~~--~~~~v~r~r---~LVvr~i~TVgNYdYif~w~F~qdG~Ie~ev~aTGil~t~~~--~-~~ 470 (747)
T 1w7c_A 399 YCVFENQEDYSLLRHTGA--SYSAITQNP---TLNVRFISTIGNADYNFLYKFFLDGTLEVSVRAAGYIQAGYW--N-PE 470 (747)
T ss_dssp EEEEEEECSSCSEEEEET--TEEEEECCE---EEEEEEEECCCC-CEEEEEEECTTSCEEEEEEECBCCCCEEC--C-TT
T ss_pred EEEEEEeCCeeeEEeccC--CcceeeeCc---eEEEEEEEeccccceEEEEEEecCCeEEEEEEeeEEEecccc--C-CC
Confidence 999999966679999998 333 55555 999999999999999999999999999999999999997543 2 22
Q ss_pred ccccCCccceecCCccccccceeEEeeeeccCCCCCCceEEEEEEEecCCCCCCCcce-----eEEEEEEeecchhhhhh
Q 006970 395 QIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKS-----YWTVEKETAKTEFEARL 469 (623)
Q Consensus 395 ~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~~p~~~-----~~~~~~~~l~tE~~a~~ 469 (623)
++.+|||+|+|+++|++|||+|+|||||||||.+|||+++|+++++.+ ||+++ +|++++++++||++|++
T Consensus 471 --~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~---np~~~~~~~~~~~~~~t~~~tE~~a~~ 545 (747)
T 1w7c_A 471 --TSAPYGLKIHDVLSGSFHDHVLNYKVDLDVGGTKNRASQYVMKDVDVE---YPWAPGTVYNTKQIAREVFENEDFNGI 545 (747)
T ss_dssp --TCGGGCCEEETTEECCCEEEEEEEEEEECTTSSEEEEEEEEEEEEEEE---CTTSTTCEEEEEEEEEEECCBCCTTCB
T ss_pred --CcCCCcceecCCcccCccceEEEEEeccccCCCCCEEEEEeeEEcccC---CCCCcccccceeEEEEEEccchhhhhh
Confidence 247899999999999999999999999999999999999999998864 77777 89999999999999999
Q ss_pred cCC-C-CCcEEEEeCCCCCCCCCCceeEEEccCCc-ccCCCCCCChhccccccceeeeEEeecCCCCCCCCCcCccCCCC
Q 006970 470 NLD-T-KPMEFALVNPSKKTKIGHPVGYRLLPGSI-IGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHG 546 (623)
Q Consensus 470 ~~~-~-~~r~w~i~N~~~~N~~G~p~gYkl~p~~~-~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~ 546 (623)
+++ . ++|+| |+|++++|++|+|+||||+|+++ ++++++++|...+||+||+|+||||||+++|+||||.|++|+.+
T Consensus 546 ~~~~~~~~r~~-ivN~~~~N~~G~p~gYkl~p~~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~ynq~~~~ 624 (747)
T 1w7c_A 546 NWPENGQGILL-IESAEETNSFGNPRAYNIMPGGGGVHRIVKNSRSGPETQNWARSNLFLTKHKDTELRSSTALNTNALY 624 (747)
T ss_dssp CCCGGGCEEEE-EEEEEEECTTSCEEEEEEEECTTCCCCSCSSCTTCSSSCGGGGSSEEEEECCTTCCCSCCTTCTTCSS
T ss_pred cCCCCCCceEE-EeCCCccCCCCCcceEEEecCCCCcccccCCCchhhhcchhccCcEEEecCCCCccCCCCCccccCCC
Confidence 999 5 79999 99999999999999999999999 99999999999999999999999999999999999999766666
Q ss_pred CC--ChhccccCCCceeeCCeEEEEEeccccCCCCCCCCcc--cceeeeeEEEecCCCCCCCCCCCCCC
Q 006970 547 DD--TLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVM--PTVSCGFELRPTNFFEYNPVLKVIPP 611 (623)
Q Consensus 547 ~~--~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvm--p~~~~~f~L~P~nFFd~nP~ldvp~~ 611 (623)
++ +|++|+ +||+|+|+|||+|||||+||+||+|||||| |++++||+|||+|||++||+||+|++
T Consensus 625 ~~~~~~~~~~-~~e~I~n~DiVlW~t~G~~HiPr~ED~PvM~tP~~~~gf~LrP~nFF~~nP~ldvp~~ 692 (747)
T 1w7c_A 625 DPPVNFNAFL-DDESLDGEDIVAWVNLGLHHLPNSNDLPNTIFSTAHASFMLTPFNYFDSENSRDTTQQ 692 (747)
T ss_dssp SCSCCGGGGC-SCCBCTTEEEEEEEEEEEEECCCGGGSSCBCSSSSEEEEEEEEESSSSSCTTTTCSSE
T ss_pred CCCcchhhhh-CCCccccCceEEEEecccccCCChhhcCCcCCCcceEEEEEEeCCcCCCCCCccCCCc
Confidence 65 488999 999999999999999999999999999999 77999999999999999999999987
No 7
>1tu5_A Copper amine oxidase, liver isozyme; oxidoreductase, quinoenzyme, TPQ; HET: TPQ NAG NDG; 2.37A {Bos taurus} PDB: 2pnc_A* 3ala_A* 2y73_A* 1pu4_A* 1us1_A* 2y74_A* 2c10_A* 2c11_A*
Probab=100.00 E-value=7.6e-148 Score=1258.15 Aligned_cols=568 Identities=22% Similarity=0.313 Sum_probs=475.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcC---CC-------CCeEEEEEEccCCChHHhhhhhccCCCCCCcEEEEEEEeC---
Q 006970 19 SKRHPLDSLRPSEFTRVQTIVKTSY---PS-------NNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHN--- 85 (623)
Q Consensus 19 ~~~HPldpLs~~Ei~~a~~il~~~~---~~-------~~~~f~~i~L~EP~K~~vl~~l~~~~~~p~R~A~vv~~~~--- 85 (623)
.++|||||||++||++|+++|+++. +. .++.|++|+|+||+|++||+||++++++|+|+|+|+++++
T Consensus 38 ~~~~~~~~Ls~~E~~~V~~~L~~~~~l~L~~~~~a~~~dn~i~~IeL~~P~K~~vL~~Ld~~~~~P~R~A~vv~~~~~~~ 117 (746)
T 1tu5_A 38 DQSQLFADLSREELTTVMSFLTQQLGPDLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGGQP 117 (746)
T ss_dssp ---CCSSCCCHHHHHHHHHHHHHHHCSSCBCTTTCCTTSEEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEECSSS
T ss_pred CCCCcCCCCCHHHHHHHHHHHhccCccCccccccCCccccEEEEEECCCCCHHHhhhhhcCCCCCCCccEEEEEEeCCCC
Confidence 4479999999999999999999875 21 3588999999999999999999988778999999999885
Q ss_pred -CeEEEEEEE-CCCCeEEEEEeec--CCCcC----CCCHHHHHHHHHHHhcChHHHHHHHhcCC-CCCc--eEEcccccc
Q 006970 86 -HQTHEIIVD-LSKRSIVSDKVYT--GHGFP----LLTLEEQHAGAALVLAYEPFKASVKKRGL-NISD--VVCSASTVG 154 (623)
Q Consensus 86 -~~~~e~vV~-L~~~~v~~~~~~~--~~~~p----~i~~~E~~~~e~~~~~~p~~~~a~~~~gi-d~~~--v~~d~w~~G 154 (623)
+.++|++|+ |+.+++++....+ ++.+| +++.+|+.++|++|+++|.+++++.++|+ ++.. ++|++|..|
T Consensus 118 ~~~v~E~vV~PL~~~~~~~~~~~~~~~~~~p~~~r~i~~~E~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~ 197 (746)
T 1tu5_A 118 QPNVTELVVGPLPQPSYMRDVTVERHGGPLPYYRRPVLLREYLDIDQMIFNRELPQAAGVLHHCCSYKQGGQKLLTMNSA 197 (746)
T ss_dssp SCEEEEEEEESSSSCCEEEECHHHHHSSCEEGGGSCCCHHHHHHHHHHHHHTTGGGGHHHHHHHHCTTTTCCCEEEECCS
T ss_pred CCceEEEEecCCCCCcEEEEcccCCCCCcCCcccCCCCHHHHHHHHHHHHHCHHHHHHHHHhcCCCcccCCEEEeCcccc
Confidence 457899999 9999875443113 34578 99999999999999999999999998776 3222 778999666
Q ss_pred ccCCCCCeeEEEEEEEEeeCCCCCcccCcCCCeEEEEecC-----CcEEEEEeCCcc-----------------ccCCCC
Q 006970 155 WYGEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDIE-----EMKVTEYNDREV-----------------APIPKP 212 (623)
Q Consensus 155 ~~~~~~~rRl~~~~~~~r~~~~~n~Ya~Pi~gl~~~vD~~-----~~~vv~i~d~~~-----------------~~~p~~ 212 (623)
..+..+++|++|++||....+ +|+|+||| ||+++||++ +|||++|++.+. .++|..
T Consensus 198 p~~~~~g~R~~~~~~~r~~~~-~n~Y~~Pl-g~~~~vD~~~~D~~~~~V~~i~y~g~~~~s~~el~~~~~~g~~~~~~~p 275 (746)
T 1tu5_A 198 PRGVQSGDRSTWFGIYYNITK-GGPYLHPV-GLELLVDHKALDPADWTVQKVFFQGRYYENLAQLEEQFEAGQVNVVVIP 275 (746)
T ss_dssp SCSSSTTCCEEEEEEEECCSS-SCGGGSEE-EEEEEEECCSSSGGGCEEEEEEETTEEESSHHHHHHHHHTTCCCCCCCC
T ss_pred CCcCCCCcEEEEEEEEEecCC-CCccccce-eeEEEEeCCCCCcccCEEEEEEECCCccCchhhhhcccccCCcccccCc
Confidence 443335699999999755333 89999999 799999997 699999985531 011211
Q ss_pred CCCCCCcCC--CCCC-CCCCCCCceeec-cCCeEEEeceEEEeeceEEEEEecCCcceeEEeeEEecCCCCeEeEEEeee
Q 006970 213 EPTEYRLSK--LKPP-FGPRLNSVATSS-TRPGFKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRG 288 (623)
Q Consensus 213 ~~~~y~~~~--~~~~-~r~~lkP~~i~q-eG~sf~v~g~~V~W~~W~f~~gf~~reGl~L~dv~~~d~~~~~~r~V~yr~ 288 (623)
.+|.+.. .... .|+++ |++|+| ||+||+|+|+.|+||||+||||||+||||+||||+|++ |||+||+
T Consensus 276 --~~~~~~~~~~~~~~~r~~~-p~~i~QPeG~sF~v~g~~V~W~~W~f~vgf~~reGlvL~dv~y~g------r~V~Yrl 346 (746)
T 1tu5_A 276 --DDGTGGFWSLKSQVPPGPT-PPLQFHPQGPRFSVQGNRVASSLWTFSFGLGAFSGPRVFDVRFQG------ERLAYEI 346 (746)
T ss_dssp --C-----------------------------CEEEETTEEEESSEEEEEEEETTTEEEEEEEEETT------EEEEEEE
T ss_pred --cccCcccccccccccCCCC-CcceeCCCCCCEEecCCcccCCCcEEEEecCCCCceEEEeeEECC------eeEEEEE
Confidence 1244433 2222 35565 999999 99999999999999999999999999999999999987 9999999
Q ss_pred ceeeeeeccCCCCCC-------------------------C-------------CCCccEEecceEEEeeecCCCceeee
Q 006970 289 FISELFIPYQDPSEG-------------------------C-------------QDGTPVKTPNAVCIFERHAGDVMWRH 330 (623)
Q Consensus 289 Sl~Em~VpY~dp~~~-------------------------C-------------~~G~p~~~~naiCi~E~d~~g~l~kH 330 (623)
|||||+||||||++. | .+|+|++++|||||||+|+|.+||||
T Consensus 347 Sl~Em~VPYgdp~p~~~~~~~~D~~yG~G~~a~~L~~GcDCpg~i~Y~D~~~~~~~G~p~~~~naiCihE~d~G~~lwkH 426 (746)
T 1tu5_A 347 SLQEAGAVYGGNTPAAMLTRYMDSGFGMGYFATPLIRGVDCPYLATYMDWHFVVESQTPKTLHDAFCVFEQNKGLPLRRH 426 (746)
T ss_dssp EEEEEEEEECCSSHHHHHCEEEGGGTCTTTTBCCCCBTTTBCTTSEEEEEEEEESSSSCEEEEEEEEEEEEEEEEEEEEC
T ss_pred EeeeEEeecCCCCchhhcceeeccccCcccccccCccCCCCCCCCEEEeeEEecCCCCEEEcCCeEEEEEeeCCeeeeee
Confidence 999999999999653 4 78999999999999999965569999
Q ss_pred eecCCC-Ce-eeecccceEEEEEEEEEeeccceEEEEEEccCccEEEEEEEeeeeeeeeecccccCccccCCccceecCC
Q 006970 331 TEAEMP-GH-VREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADN 408 (623)
Q Consensus 331 ~~~~~~-~~-v~~~r~~~~LVvr~i~TVgNYdYi~~w~F~qDGtIe~~v~aTG~l~t~~~~~~~~~~~~~~~yGt~V~~~ 408 (623)
++.++. .. ++|+| +||||+|+|||||||||+|+|||||+||++|+|||||+|... . .+ +.+|||+|+|+
T Consensus 427 ~~~~~~~~~~v~r~r---~LVvr~i~TVgNYdYi~~w~F~qdG~Ie~ev~aTGil~t~~~--~-~~---~~~yGt~V~~~ 497 (746)
T 1tu5_A 427 HSDFLSHYFGGVAQT---VLVFRSVSTMLNADYVWDMVFYPNGAIEVKLHATGYISSAFL--F-GA---ARRYGNQVGEH 497 (746)
T ss_dssp CCSTTCCCCCEEEEE---EEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCCEEC--C-TT---GGGGEEEEETT
T ss_pred cccccCCceeeeccc---EEEEEEEEeecccceEEEEEEecCCcEEEEEEecceEeeeec--C-CC---CCCCcceecCC
Confidence 994332 23 55555 999999999999999999999999999999999999997542 2 11 47899999999
Q ss_pred ccccccceeEEeeeeccCCCCCCceEEEEEEEecCCCCCCCccee-----EEEEEEeecchhhhhhcCCC-CCcEEEEeC
Q 006970 409 SIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSY-----WTVEKETAKTEFEARLNLDT-KPMEFALVN 482 (623)
Q Consensus 409 ~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~~p~~~~-----~~~~~~~l~tE~~a~~~~~~-~~r~w~i~N 482 (623)
++|++|||+|+|||||||||.+|||+++|+++++.+ ||++++ |++++++++||++|+++++. ++|+| |+|
T Consensus 498 v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~---np~~~~~~~~~~~~~~t~~~tE~~a~~~~~~~~~r~~-ivn 573 (746)
T 1tu5_A 498 TLGPVHTHSAHYKVDLDVGGLENWVWAEDMAFVPTA---IPWSPEHQIQRLQVTRKQLETEEQAAFPLGGASPRYL-YLA 573 (746)
T ss_dssp EEEECEEEEEEEEEEECTTSSEEEEEEEEEEEEEEE---ETTEEEEEEEEEEEEEEECCBGGGGEEETTSCCCSEE-EEE
T ss_pred ccccccceEEEEEecccccCCCCEEEEEeeEEcccC---CCCCcccccceeEEEEEEeeehhhhccccCCCCceEE-EeC
Confidence 999999999999999999999999999999998864 888888 89999999999999999999 89999 999
Q ss_pred CCCCCCCCCceeEEEccCCcccCCCCCCChhccccccceeeeEEeecCCCCCCCCCcCccCCCCCC--ChhccccCCCce
Q 006970 483 PSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDD--TLLQWTDGNREI 560 (623)
Q Consensus 483 ~~~~N~~G~p~gYkl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~--~l~~~~~~~e~i 560 (623)
++++|++|+|+||||+|+++++++++++|...+||+||+|+||||||+++|+||||.|++|+++++ +|.+|+ +||+|
T Consensus 574 ~~~~N~~G~p~gYkl~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~ynq~~~~~~~~~~~~~~-~~e~I 652 (746)
T 1tu5_A 574 SKQSNKWGHPRGYRIQTVSFAGGPMPQNSPMERAFSWGRYQLAITQRKETEPSSSSVFNQNDPWTPTVDFSDFI-NNETI 652 (746)
T ss_dssp EEEECTTSCEEEEEEEEECBCCCCCCTTSTTGGGGGGGGEEEEEEECCTTCCCSSCTTTTTCTTSCSCCGGGGC-SCCBC
T ss_pred CCCcCCCCCcceEEECcCCcccccCCCcchhhccccccccceEEeccCCCcccCCccccccCCCCCCccHhhhc-CCCCc
Confidence 999999999999999999999999999999999999999999999999999999999977777665 478999 99999
Q ss_pred eeCCeEEEEEeccccCCCCCCCCcc--cceeeeeEEEecCCCCCCCCCCCCCC
Q 006970 561 ENTDIVLWYTMGIHHAPCQEDFPVM--PTVSCGFELRPTNFFEYNPVLKVIPP 611 (623)
Q Consensus 561 ~~~DiV~W~t~G~~H~Pr~ED~Pvm--p~~~~~f~L~P~nFFd~nP~ldvp~~ 611 (623)
+|+|||+|||||+||+||+|||||| |++++||+|||+|||++||+||+|++
T Consensus 653 ~n~DiV~W~t~G~~HiPr~ED~PvM~tp~~~~gf~LrP~nFF~~nP~ld~p~~ 705 (746)
T 1tu5_A 653 AGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDQEPSMDSADS 705 (746)
T ss_dssp SSEEEEEEEEEEEEECCCGGGSSCBCCCSCCEEEEEEEESSSSSSCCCC----
T ss_pred cCCceEEEEecccccCCChhccCccCCCccEEEEEEEeCCCCCCCCcccCCCc
Confidence 9999999999999999999999999 88999999999999999999999998
No 8
>3hi7_A Amiloride-sensitive amine oxidase; oxidoreductase, copper amine oxidase, topaquinone, TPQ, DIAM oxidase, DAO, human, glycoprotein, heparin-binding; HET: TPQ NAG BMA; 1.80A {Homo sapiens} PDB: 3hig_A* 3hii_A* 3k5t_A* 3mph_A*
Probab=100.00 E-value=2e-137 Score=1167.44 Aligned_cols=571 Identities=25% Similarity=0.344 Sum_probs=476.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcC-C--C-------CCeEEEEEEccCCChHHhhhhhccCCCCCCcEEEEEEEeCCe---
Q 006970 21 RHPLDSLRPSEFTRVQTIVKTSY-P--S-------NNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHNHQ--- 87 (623)
Q Consensus 21 ~HPldpLs~~Ei~~a~~il~~~~-~--~-------~~~~f~~i~L~EP~K~~vl~~l~~~~~~p~R~A~vv~~~~~~--- 87 (623)
+-+|++||++|+++|+++|.++. + . .++++.+|+|+.|+|++||+|||+++++|+|+|+|++++|++
T Consensus 10 ~~vf~dLs~~E~~~V~~~L~~~~~l~Lt~~~~a~~~dN~i~~iEl~~P~K~~vL~~LD~~~~~P~R~A~vvi~fG~~~~P 89 (731)
T 3hi7_A 10 AGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYHVLRFLDKGERHPVREARAVIFFGDQEHP 89 (731)
T ss_dssp GGGGCCCCHHHHHHHHHHHHTCGGGCBCCTTSSCSSSEEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEEECSSSSC
T ss_pred CCccccCCHHHHHHHHHHHhcCCCCCCcccccCCccCCeEEEEEecCCCchhhhhhhcCCCCCCCcceEEEEEcCCCCCC
Confidence 56799999999999999999873 2 1 689999999999999999999999988999999999999655
Q ss_pred -EEEEEE-ECCCCeEEEEEeecCCCc------CCCCHHHHHHHHHHHhcC-hHHHHHHH-hcCC--CCCceEEccc----
Q 006970 88 -THEIIV-DLSKRSIVSDKVYTGHGF------PLLTLEEQHAGAALVLAY-EPFKASVK-KRGL--NISDVVCSAS---- 151 (623)
Q Consensus 88 -~~e~vV-~L~~~~v~~~~~~~~~~~------p~i~~~E~~~~e~~~~~~-p~~~~a~~-~~gi--d~~~v~~d~w---- 151 (623)
..|++| +|+.++.++... ++.+. .+++..|+.++.+++.+- ..+.+.+. -.|. +.+.-.|+.+
T Consensus 90 ~v~Ey~VGPLP~p~~~~~l~-~~~~~~~p~~~R~~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~cL~~~~~~ 168 (731)
T 3hi7_A 90 NVTEFAVGPLPGPCYMRALS-PRPGYQSSWASRPISTAEYALLYHTLQEATKPLHQFFLNTTGFSFQDCHDRCLAFTDVA 168 (731)
T ss_dssp EEEEEEEECSSSCCEEEEES-CCTTCCCHHHHSCCCHHHHHHHHHHHHHHTGGGHHHHHHHHSCBSSSCSSSBEEEEECS
T ss_pred eeEEEEEcCCCCCCeeeecc-cCCCCcCCcccCCCcHHHHHHHHHHHHHHHhHHHHHHHHHhCceecCCCCCEEeeecCC
Confidence 569999 699998877655 44333 347777888777775432 22222222 1333 3333234333
Q ss_pred cccccCCCCCeeEEEEEEEEeeCCCCCcccCcCCCeEEEEecCC-----cEEEEEe-----------------CCcc--c
Q 006970 152 TVGWYGEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDIEE-----MKVTEYN-----------------DREV--A 207 (623)
Q Consensus 152 ~~G~~~~~~~rRl~~~~~~~r~~~~~n~Ya~Pi~gl~~~vD~~~-----~~vv~i~-----------------d~~~--~ 207 (623)
+.| +.+ ++||+| +.|+| . .+++|.||+ ||+++||+.+ |+|.+|- ++.. +
T Consensus 169 P~~-~~s-g~r~~W--~~~~~-~-~~g~~l~P~-gl~~~vDh~~~Dps~W~v~~v~Yng~~y~s~eel~~~y~~g~~~~~ 241 (731)
T 3hi7_A 169 PRG-VAS-GQRRSW--LIIQR-Y-VEGYFLHPT-GLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGEVDVV 241 (731)
T ss_dssp SCS-SST-TCCEEE--EEEEE-C-STTGGGCEE-EEEEEEECCSSSGGGCEEEEEEETTEECSSHHHHHHHHHTTCCCCC
T ss_pred CCc-cCC-CCEEEe--hheec-c-CCCceeecc-ceEEEEecCCCChHHcEEEEEEECCEecCCHHHHHHHHhCCCeeEe
Confidence 234 222 567776 67777 3 457899999 8999999997 7888874 2222 1
Q ss_pred c--CCCCCCC---------CCCcCCCCC--CCCCCCCCceeec-cCCeEEEeceEEEeeceEEEEEecCCcceeEEeeEE
Q 006970 208 P--IPKPEPT---------EYRLSKLKP--PFGPRLNSVATSS-TRPGFKINGNTVKWANWVFNVGFDARVGTIISTASI 273 (623)
Q Consensus 208 ~--~p~~~~~---------~y~~~~~~~--~~r~~lkP~~i~q-eG~sf~v~g~~V~W~~W~f~~gf~~reGl~L~dv~~ 273 (623)
. .|..++. .|..-..++ ..++++||++|+| ||+||+|+|++|+||||+||||||+||||+||||+|
T Consensus 242 ~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~~~~~kp~~i~QPeG~sF~V~g~~V~W~~W~F~vgfn~reGlvL~dV~y 321 (731)
T 3hi7_A 242 VLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEGNAVLYGGWSFAFRLRSSSGLQVLNVHF 321 (731)
T ss_dssp CCCCCC----------CCCCTTSCCCCSCCSBCCCSCCCEEECTTCCSSEEETTEEEEBTEEEEEEEETTTEEEEEEEEE
T ss_pred ccCCCCCcccccccccccccccccccCCCCCCCCCCCCcceeCCCCCCEEEeCCEEEecCcEEEEecCCCCCcEEEeEEE
Confidence 1 1212110 122112233 3478999999999 999999999999999999999999999999999999
Q ss_pred ecCCCCeEeEEEeeeceeeeeeccCCCCCC-------------------------C-------------CCCccEEecce
Q 006970 274 YDINMHKYRRVLYRGFISELFIPYQDPSEG-------------------------C-------------QDGTPVKTPNA 315 (623)
Q Consensus 274 ~d~~~~~~r~V~yr~Sl~Em~VpY~dp~~~-------------------------C-------------~~G~p~~~~na 315 (623)
+| |||+||+|||||+||||||+++ | .+|+|++++||
T Consensus 322 ~g------r~v~YrlSlsEm~VpYgdp~p~~~~k~~fD~GyG~G~~an~L~lGcDCpg~i~YlD~~~~~~~G~p~~~~na 395 (731)
T 3hi7_A 322 GG------ERIAYEVSVQEAVALYGGHTPAGMQTKYLDVGWGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPRA 395 (731)
T ss_dssp TT------EEEEEEEEEEEEEEEECCSSHHHHHCEEEGGGGTGGGCCCCCCBTTTBCTTSEEEEEEEEESCSSCEEEEEE
T ss_pred CC------eeEEEEeeeeeeEEccCCCCCccccceeeecCcCccccccccccCCCCCCCCEEEeeEEecCCCCEEecCCE
Confidence 98 9999999999999999999875 4 68999999999
Q ss_pred EEEeeecCCCceeeeee--cCCCCeeeecccceEEEEEEEEEeeccceEEEEEEccCccEEEEEEEeeeeeeeeeccccc
Q 006970 316 VCIFERHAGDVMWRHTE--AEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYV 393 (623)
Q Consensus 316 iCi~E~d~~g~l~kH~~--~~~~~~v~~~r~~~~LVvr~i~TVgNYdYi~~w~F~qDGtIe~~v~aTG~l~t~~~~~~~~ 393 (623)
|||||+|+|.++|||++ ++++..++.++++++||||+|+|||||||||+|+|||||+||+||+|||||++... . .
T Consensus 396 ICihE~d~Gi~~~kHtd~~~r~~~~~~~~~r~r~LVvr~I~TVgNYDYif~w~F~qdGsIe~eVraTGilst~~~--~-~ 472 (731)
T 3hi7_A 396 LCLFEMPTGVPLRRHFNSNFKGGFNFYAGLKGQVLVLRTTSTVYNADYIWDFIFYPNGVMEAKMHATGYVHATFY--T-P 472 (731)
T ss_dssp EEEEEEECSSCSEEEEEECSSSSEEEEEEECCEEEEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEECCCEEEC--C-G
T ss_pred EEEEEeeCCeeEEEecccccCCccceeecccccEEEEEEeeecccccEEEEEEEecCCeEEEEEEEEEEEeeccc--C-C
Confidence 99999997767999986 44432234456677999999999999999999999999999999999999997643 1 1
Q ss_pred CccccCCccceecCCccccccceeEEeeeeccCCCCCCceEEEEEEEecCCCCCCCcc--eeEEEEEEeecchhhhhhcC
Q 006970 394 DQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRK--SYWTVEKETAKTEFEARLNL 471 (623)
Q Consensus 394 ~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~~p~~--~~~~~~~~~l~tE~~a~~~~ 471 (623)
+ +.+|||+|+|+++|++|||+|+|||||||||.+|||+++|+++++.+.+++|.. +++++++++++||++|++++
T Consensus 473 ~---~~~yGt~V~p~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~~~~nP~~~~~~~~~~~~~~t~l~tE~ea~~~~ 549 (731)
T 3hi7_A 473 E---GLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYSWERQAAFRF 549 (731)
T ss_dssp G---GGGSEEEEETTEEEECEEEEEEEEEEECTTSSEEEEEEEEEEEEEEECTTCTTSEEEEEEEEEEEECBGGGGCBCT
T ss_pred C---CCCCcceecCCcccccceeEEEEEeccccCCCCCEEEEEeceecCCCCCCCCCccceeEEEEEEEccchhhhhhcc
Confidence 2 368999999999999999999999999999999999999999998766777764 66899999999999999999
Q ss_pred CC-CCcEEEEeCCCCCCCCCCceeEEEccCCcccCCCCCCChhccccccceeeeEEeecCCCCCCCCCcCccCCCCCC--
Q 006970 472 DT-KPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDD-- 548 (623)
Q Consensus 472 ~~-~~r~w~i~N~~~~N~~G~p~gYkl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~-- 548 (623)
+. ++|+|+|+|+ ++|++|+|+||||+|++.+..++.++|...+||+||+|+||||||+|+|+||||+|++|+++++
T Consensus 550 ~~~~~R~~~i~N~-~~N~~G~pvgYkl~p~~~~~~~l~~~s~~~rra~fa~~~lwVT~y~d~E~~aag~y~~~s~~~~~~ 628 (731)
T 3hi7_A 550 KRKLPKYLLFTSP-QENPWGHKRSYRLQIHSMADQVLPPGWQEEQAITWARYPLAVTKYRESELCSSSIYHQNDPWDPPV 628 (731)
T ss_dssp TSCCCSEEEEEEE-EECTTSCEEEEEEEEECCCCCCSCTTSGGGGGGGGGGCSEEEEECCGGGSCSCCTTTTTCSSSCSC
T ss_pred CCCCceEEEEeCC-CcCCCCCceeEEEccCCccccccCCcchhhhhchhcccceEEecCCCCccCCCccccccCCCCCCC
Confidence 99 9999999999 8999999999999999887777779999999999999999999999999999999999988764
Q ss_pred ChhccccCCCceeeCCeEEEEEeccccCCCCCCCCcc--cceeeeeEEEecCCCCCCCCCCCCCCC
Q 006970 549 TLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVM--PTVSCGFELRPTNFFEYNPVLKVIPPK 612 (623)
Q Consensus 549 ~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvm--p~~~~~f~L~P~nFFd~nP~ldvp~~~ 612 (623)
||++|+++||+|+|||||+|||||+||+||+|||||| |++++||+|||+|||++||+||++++.
T Consensus 629 gl~~w~~~~e~I~n~DiV~W~t~G~~HiPr~ED~PvMptp~e~~~f~LrP~nFFd~nPalds~~~v 694 (731)
T 3hi7_A 629 VFEQFLHNNENIENEDLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLASRDTV 694 (731)
T ss_dssp CTTHHHHTCCBCSSEEEEEEEEEEEEECCCGGGSSCBCSTTCEEEEEEEEESSSSSCGGGGCTTCE
T ss_pred CHHHHhhCCCceecCceEEEEecccccCCChhhcCccccccceeEEEEEccCCCCCCccccCcceE
Confidence 7999999999999999999999999999999999999 558999999999999999999999763
No 9
>3pgb_A Putative uncharacterized protein; oxidoreductase, copper amine oxidase, CAO, topaquinone, TPQ; HET: TPQ NAG BMA MAN; 2.45A {Emericella nidulans}
Probab=100.00 E-value=1.3e-137 Score=1170.27 Aligned_cols=570 Identities=21% Similarity=0.298 Sum_probs=467.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcC-C--C-------CCeEEEEEEccCCChHHhhhhhccCCCCCCcEEEEEEEeCCe
Q 006970 18 SSKRHPLDSLRPSEFTRVQTIVKTSY-P--S-------NNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHNHQ 87 (623)
Q Consensus 18 ~~~~HPldpLs~~Ei~~a~~il~~~~-~--~-------~~~~f~~i~L~EP~K~~vl~~l~~~~~~p~R~A~vv~~~~~~ 87 (623)
+-++.+|++||++|+++|+++|.++. + . .++++.+|+|+.|+|++||+|||+++++|+|+|+|++++|++
T Consensus 62 ap~~~vfadLs~~E~~aV~~~L~~~~~l~Lt~~~~a~~~dN~i~~iEl~~P~K~~vL~~LD~~~~~P~R~A~vvi~fG~~ 141 (797)
T 3pgb_A 62 APKENVWYGLTDDETADVAKWLFGRPELNLTTTENAGEWDNTIALIELHRPNKSEAIPYLDGSGPAPTRHAHVRLNNRAT 141 (797)
T ss_dssp CSSCCSSSCCCHHHHHHHHHHHHTCTTTCCCCTTTCCSSSEEEEEEEEECCCHHHHHHHHHC---CCCCEEEEEEEECSS
T ss_pred CCCCCcccccCHHHHHHHHHHHhcCCCCCCcccccCCccCCeEEEEEeeCCCHHHHHHhhcCCCCCCCeeEEEEEEcCCC
Confidence 33489999999999999999999984 2 1 689999999999999999999999988999999999999654
Q ss_pred ----EEEEEE-ECCCC--eEEEEEeec---CC-C-----cCCCCHHHHHHHHHHHhcChHHHHHHHh---cCCCCCceEE
Q 006970 88 ----THEIIV-DLSKR--SIVSDKVYT---GH-G-----FPLLTLEEQHAGAALVLAYEPFKASVKK---RGLNISDVVC 148 (623)
Q Consensus 88 ----~~e~vV-~L~~~--~v~~~~~~~---~~-~-----~p~i~~~E~~~~e~~~~~~p~~~~a~~~---~gid~~~v~~ 148 (623)
..|++| +|+.+ +.++....+ +. + ..+++..|...+.++++.-......+-. .|.+.+.+.+
T Consensus 142 ~~P~v~Ey~VGPLP~p~~t~~~~l~~~y~~~~~g~~~~~~r~~~~~e~~~l~~~~~~~~~~~~~l~~~t~~~~~~~~L~~ 221 (797)
T 3pgb_A 142 TDPYFADILVGPLPVSNATTWEPLEFPYTRKTQGQVRNVEPDGETVYSEWLFKISASIADITLDLWNGTALGLENDTLDI 221 (797)
T ss_dssp SSCEEEEEEEESSSCSTTCEEEECCTTCSSCSTTEEECSCCCTTHHHHTTHHHHHHHTHHHHHHHHSCCCSSSTTCCEEE
T ss_pred CCCceEEEEEcCCCCCCcceeEEccccccCCCCCCCCcccCcchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCeEee
Confidence 569999 69977 677765442 11 1 1235677777777776554433333321 2222223332
Q ss_pred -ccccccccCCCCCeeEEEEEEEEeeCCC--CCcccCcCCCeEEEEecCC-----cEEEEEeC-----------------
Q 006970 149 -SASTVGWYGEKKSKRVLKFPCFYTDQGT--INMFLRPIEGITIVVDIEE-----MKVTEYND----------------- 203 (623)
Q Consensus 149 -d~w~~G~~~~~~~rRl~~~~~~~r~~~~--~n~Ya~Pi~gl~~~vD~~~-----~~vv~i~d----------------- 203 (623)
+.-+.| +.+ ++|+.| ++|+|.-++ +++|.||+ ||+++||+.+ |+|.+|-.
T Consensus 222 ~~~~P~g-~~s-g~r~~W--~~~~~~~~g~~d~~~lhP~-gl~~lvDh~~~Dps~W~v~~v~Yng~~y~s~eel~~~y~~ 296 (797)
T 3pgb_A 222 WGIDPLW-QDD-GRIIRW--DMFWNMADDEFDSETLLPL-GLYLKSDVTGRDPSQWKLLGWMYNDIFYETTEEFRKAYWS 296 (797)
T ss_dssp EECSSCB-CST-TCCEEE--EEEEECCCTTCCCGGGCEE-EEEEEEECCSSCGGGCEEEEEEETTEEESSHHHHHHHHTS
T ss_pred eccCCCC-cCC-CCEEEe--eeeeccCCCccccceeecc-ceEEEEecCCCChhHcEEEEEEECCEecCCHHHHHHHHhC
Confidence 111234 222 345544 777773222 56999999 8999999996 78888742
Q ss_pred CccccCCCCCCCCCCcCCCCC--CCCCCCCCceeec-cCCeEEEe--ceEEEeeceEEEEEecCCcceeEEeeEEecCCC
Q 006970 204 REVAPIPKPEPTEYRLSKLKP--PFGPRLNSVATSS-TRPGFKIN--GNTVKWANWVFNVGFDARVGTIISTASIYDINM 278 (623)
Q Consensus 204 ~~~~~~p~~~~~~y~~~~~~~--~~r~~lkP~~i~q-eG~sf~v~--g~~V~W~~W~f~~gf~~reGl~L~dv~~~d~~~ 278 (623)
+....+.+.....|.....++ +.|+++||++|+| ||+||+|+ |++|+||||+||||||+||||+||||+|+|
T Consensus 297 g~~~~~~~~~~g~ws~~~~~g~~~~~~~lkP~~i~QPeGpsF~V~g~g~~V~W~~W~F~vgfn~ReGlvL~dV~y~g--- 373 (797)
T 3pgb_A 297 PGFVKLKPNVDGAWAHTEQRGPVPPQDRKQPPVMIAPDGARYSVDAERKYVTWMDFSFYIAFNRDTGLSLFDIKYKG--- 373 (797)
T ss_dssp TTCCCCCCCCCCGGGCCSCCSCCCTTTTSCCCCCCCTTCCCSEEETTTTEEEETTEEEEEEEETTTEEEEEEEEETT---
T ss_pred CCeeecCCCCCCcccccccCCCCCCcCCCCCceeeCCCCCCEEEecCCCEEEeCCcEEEEecCCCCceEEEccccCC---
Confidence 222222222223443222222 4578999999999 99999997 799999999999999999999999999998
Q ss_pred CeEeEEEeeeceeeeeeccCCCCCC-------------------------C------------CCCccEEecceEEEeee
Q 006970 279 HKYRRVLYRGFISELFIPYQDPSEG-------------------------C------------QDGTPVKTPNAVCIFER 321 (623)
Q Consensus 279 ~~~r~V~yr~Sl~Em~VpY~dp~~~-------------------------C------------~~G~p~~~~naiCi~E~ 321 (623)
|||+||+|||||+||||||+|. | ..|++++++|||||||+
T Consensus 374 ---r~V~YrlSlsEm~VPYg~~~P~~~~~af~D~eyG~G~~an~L~lGcDCpg~i~YlD~~~~~~~~p~~~~NaICihE~ 450 (797)
T 3pgb_A 374 ---QRVLYELGLQEALAHYAANDPVQSSVAYLDSYYGFGPYAFELLKGYDCPSYASYLNTSFYKDEETHTHVDSLCLFEF 450 (797)
T ss_dssp ---EEEEEEEEEEEEEEEECCSSHHHHHCEEEGGGTCSGGGCCCCCBTTTBCTTCEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred ---eeEEEEeEeeeeEEeCCCCChhhhcceeeecccCCccccccCccCCCCCCCCEEeeeEEecCCCceEeccEEEEEEe
Confidence 9999999999999999998753 4 45789999999999999
Q ss_pred cCCCceeeeeecCCCCe-eeecccceEEEEEEEEEeeccceEEEEEEccCccEEEEEEEeeeeeeeeecccccCccccCC
Q 006970 322 HAGDVMWRHTEAEMPGH-VREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQ 400 (623)
Q Consensus 322 d~~g~l~kH~~~~~~~~-v~~~r~~~~LVvr~i~TVgNYdYi~~w~F~qDGtIe~~v~aTG~l~t~~~~~~~~~~~~~~~ 400 (623)
|+|.|||||++.. .. ++|+| +||||+|+|||||||||+|+|||||+||+||+|||||++.. + . + +.+
T Consensus 451 D~G~~lwKHt~~~--~~~v~r~r---~LVvr~I~TVgNYDYif~w~F~qdGsIe~eVraTGiLst~~--~-~-~---~~~ 518 (797)
T 3pgb_A 451 DADYPMARHSTSE--FVSVTKNV---YFTLRSVSTIGNADYMFSYNFHMDGTIGVEVRASGYIQSAY--Y-A-N---NQD 518 (797)
T ss_dssp ECSSCSEEEECSS--EEEEECCE---EEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCCEE--C-T-T---CGG
T ss_pred eCCceeEEeccCC--cceEEecc---EEEEEEEeeeccccEEEEEEEecCCeEEEEEEEEEEEEecc--c-C-C---CCC
Confidence 9777899999952 33 45555 99999999999999999999999999999999999999752 2 1 1 478
Q ss_pred ccceecCCccccccceeEEeeeeccCCCCCCceEEEEEEEecCCCCCC--CcceeEEEEEEeecchhhhhhcCCC-CCcE
Q 006970 401 HGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNT--PRKSYWTVEKETAKTEFEARLNLDT-KPME 477 (623)
Q Consensus 401 yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~~--p~~~~~~~~~~~l~tE~~a~~~~~~-~~r~ 477 (623)
|||+|+|+++|++|||+|+|||||||||.+|||+++|+++++.+.+++ +++++|++++++++||+||+++++. ++|.
T Consensus 519 yGt~V~p~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~~~~~p~~p~~~~n~~~~~~t~l~tE~eA~~~~~~~~~r~ 598 (797)
T 3pgb_A 519 FGYQIHDSLSGSMHDHVLNFKADFDILGPNNTIELVSVVPVTKQFSWSGNKTRNTMQLGRSFIHSEDEARLNWGFNGQTQ 598 (797)
T ss_dssp GCCEEETTEECCCEEEEEEEEEEECTTSSEEEEEEEEEEEEEEECTTTTTCEEEEEEEEEEECCBGGGCEECCCGGGCEE
T ss_pred ccceecCCccccccceEEEEeeccCCCCCCCeEEEEeeEEccCCCCCCCCcccceeEEEEEEccchhhhhhhcCCCCCce
Confidence 999999999999999999999999999999999999999998765654 4589999999999999999999999 9999
Q ss_pred EEEeCCCCCCCCCCceeEEEccCCcccCCCCCCC-hhccccccceeeeEEeecCCCCCCCCCcCccCCCCCCC--hhccc
Q 006970 478 FALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDD-YPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDT--LLQWT 554 (623)
Q Consensus 478 w~i~N~~~~N~~G~p~gYkl~p~~~~~~~~~~~s-~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~~--l~~~~ 554 (623)
|+|+|++++|++|+|+||||+|++++.+|+.++| ..++||+||+|+||||||+|+|+||||+|++|++++++ +.+|+
T Consensus 599 ~~ivN~~~~N~~G~pvgYkL~p~~~~~~L~~~~s~~~~rra~fa~~~lwVT~y~d~E~~aaG~y~~qs~~~~~v~~~~~~ 678 (797)
T 3pgb_A 599 LHVVNQDKPNKFGEPRGYRILPSAGTAHLTVLNSSNLVHAAHWAEYDVQVTRQHDFEPTSAHPYNSQDIHNPPVDFSTFF 678 (797)
T ss_dssp EEEEEEEEECTTSCEEEEEEECSSCCCCCCCSSCTTTTTTTGGGGCSEEEEECCTTCCCSCCTTGGGCTTSCSCCGGGGC
T ss_pred EEEeCCCCcCCCCCeeeEEEccCCCCccccCCCchhhhhhchhhhCceEEecCCCCccCCCCCCcccCCCCCccchhhhc
Confidence 9999999999999999999999987777765554 68899999999999999999999999999999998753 57788
Q ss_pred cCCCceeeCCeEEEEEeccccCCCCCCCCc--ccceeeeeEEEecCCCCCCCCCCCCCC
Q 006970 555 DGNREIENTDIVLWYTMGIHHAPCQEDFPV--MPTVSCGFELRPTNFFEYNPVLKVIPP 611 (623)
Q Consensus 555 ~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pv--mp~~~~~f~L~P~nFFd~nP~ldvp~~ 611 (623)
+||+|+|||||+|||||+||+||+||||| ||++++||+|||+|||++||+||+|++
T Consensus 679 -~nesI~neDiVlW~t~G~~HiPr~ED~Pvt~MP~e~~gf~LrP~nFFd~NPald~~~~ 736 (797)
T 3pgb_A 679 -NGESLNQTDLVVWLNLGMHHVPHTGDLPNTVFTTAHSGVAFTPLNYLPGDPSRETVNM 736 (797)
T ss_dssp -SCCBCSSEEEEEEEEEEEEECCCGGGSSCBCTTTSEEEEEEEEESCSSSCGGGGCSCE
T ss_pred -CCCccccCceEEEEecccccCCChhhCCCccCCcceeEEEEEcCCCCCCCccccCccc
Confidence 99999999999999999999999999999 999999999999999999999999975
No 10
>2cs7_A Pneumococcal histidine triad A protein; PHTA, pneumococcal histidine triad protein, structural genomics, unknown function; 1.20A {Streptococcus pneumoniae} SCOP: d.9.2.1
Probab=24.16 E-value=27 Score=27.03 Aligned_cols=26 Identities=19% Similarity=0.323 Sum_probs=20.2
Q ss_pred ccCCCC-CCCCCCCCHHHHHHHHHHHH
Q 006970 15 PISSSK-RHPLDSLRPSEFTRVQTIVK 40 (623)
Q Consensus 15 ~~~~~~-~HPldpLs~~Ei~~a~~il~ 40 (623)
||--.. -=|-++||+.|+++|.++|.
T Consensus 28 ~HGdH~HyIpk~~Ls~~el~~A~~yl~ 54 (55)
T 2cs7_A 28 PHGDHYHYIPKNELSASELAAAEAFLS 54 (55)
T ss_dssp EETTEEEEEEGGGSCHHHHHHHHHHHH
T ss_pred ecCCeEEEeEhHHCCHHHHHHHHHHhc
Confidence 444444 34889999999999999875
No 11
>2d0s_A Cytochrome C, cytochrome C552; heme protein, electron transport; HET: HEC; 2.20A {Hydrogenophilus thermoluteolus}
Probab=22.20 E-value=53 Score=25.50 Aligned_cols=21 Identities=14% Similarity=0.216 Sum_probs=17.8
Q ss_pred CCCCCCCHHHHHHHHHHHHhc
Q 006970 22 HPLDSLRPSEFTRVQTIVKTS 42 (623)
Q Consensus 22 HPldpLs~~Ei~~a~~il~~~ 42 (623)
-|+..||.+||++++++|+..
T Consensus 58 p~~~~Ls~~ei~~l~~yl~~l 78 (79)
T 2d0s_A 58 PPHPQVAEADIEKIVRWVLTL 78 (79)
T ss_dssp CCCTTSCHHHHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHHHHhC
Confidence 356799999999999999863
No 12
>1cc5_A Cytochrome C5; electron transport (heme protein); HET: HEM; 2.50A {Azotobacter vinelandii} SCOP: a.3.1.1
Probab=21.62 E-value=53 Score=26.33 Aligned_cols=17 Identities=6% Similarity=-0.052 Sum_probs=15.1
Q ss_pred CCCHHHHHHHHHHHHhc
Q 006970 26 SLRPSEFTRVQTIVKTS 42 (623)
Q Consensus 26 pLs~~Ei~~a~~il~~~ 42 (623)
.||.+||++++++|+.+
T Consensus 67 ~Lsd~ei~~v~~yi~~~ 83 (83)
T 1cc5_A 67 DCSDDELKAAIGKMSGL 83 (83)
T ss_dssp SCCHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHhC
Confidence 49999999999999863
Done!