Query 006971
Match_columns 623
No_of_seqs 340 out of 1015
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 13:47:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006971.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006971hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 100.0 2.8E-31 9.6E-36 268.0 6.8 233 28-325 18-256 (256)
2 3i3n_A Kelch-like protein 11; 100.0 1.6E-30 5.6E-35 265.8 8.5 238 28-330 19-268 (279)
3 3htm_A Speckle-type POZ protei 99.9 1.1E-22 3.7E-27 192.2 10.6 132 24-172 17-149 (172)
4 4eoz_A Speckle-type POZ protei 99.9 3.4E-23 1.2E-27 190.4 4.8 132 24-172 8-140 (145)
5 2if5_A Zinc finger and BTB dom 99.9 8E-22 2.8E-26 176.8 10.4 107 29-143 13-120 (120)
6 2vkp_A BTB/POZ domain-containi 99.9 4.6E-22 1.6E-26 175.0 8.6 103 35-146 2-109 (109)
7 3b84_A Zinc finger and BTB dom 99.9 4E-22 1.4E-26 179.3 7.9 106 29-145 12-117 (119)
8 2vpk_A Myoneurin; transcriptio 99.9 8.5E-22 2.9E-26 175.8 9.7 105 29-144 10-116 (116)
9 1buo_A POZ domain, protein (pr 99.9 1.3E-21 4.5E-26 176.3 10.3 106 28-145 15-120 (121)
10 1r29_A B-cell lymphoma 6 prote 99.9 1.4E-21 4.7E-26 177.2 10.4 108 28-144 16-125 (127)
11 2yy9_A Zinc finger and BTB dom 99.8 6.4E-22 2.2E-26 182.1 6.7 109 28-147 12-120 (135)
12 2z8h_A Transcription regulator 99.8 2E-21 6.8E-26 179.1 8.7 114 25-147 20-134 (138)
13 2ppi_A Gigaxonin; BTB domain, 99.8 1.9E-21 6.5E-26 181.2 7.7 108 28-143 34-144 (144)
14 2q81_A MIZ-1 protein; BTB/POZ 99.8 1.8E-21 6.3E-26 175.0 7.1 103 29-143 15-117 (119)
15 3ga1_A Nucleus accumbens-assoc 99.8 1.2E-21 4.2E-26 178.4 5.5 107 28-145 20-127 (129)
16 3ohu_A Transcription regulator 99.8 1.3E-21 4.3E-26 176.9 4.5 106 28-142 19-125 (125)
17 2ihc_A Transcription regulator 99.8 2E-21 6.9E-26 176.0 4.2 110 25-143 13-123 (124)
18 3m5b_A Zinc finger and BTB dom 99.8 6.4E-21 2.2E-25 172.5 6.0 95 35-145 24-118 (119)
19 3hqi_A Speckle-type POZ protei 99.8 3.4E-20 1.2E-24 191.9 10.0 136 28-180 161-300 (312)
20 3fkc_A Transcriptional regulat 99.8 3.9E-19 1.3E-23 159.6 9.4 94 28-127 18-112 (116)
21 2ast_A S-phase kinase-associat 99.4 1.4E-13 4.7E-18 130.6 7.9 95 44-147 3-127 (159)
22 4ajy_C Transcription elongatio 99.2 1.8E-11 6.1E-16 106.9 7.7 79 44-125 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.1 8.3E-11 2.8E-15 109.5 7.9 91 44-146 4-121 (141)
24 2p1m_A SKP1-like protein 1A; F 98.9 1.4E-10 4.8E-15 110.2 0.9 92 44-146 6-125 (160)
25 1hv2_A Elongin C, ELC1; protei 98.4 5.3E-07 1.8E-11 79.1 6.6 80 43-125 5-99 (99)
26 3v7d_A Suppressor of kinetocho 98.3 9.1E-07 3.1E-11 84.8 8.2 95 43-146 8-133 (169)
27 2fnj_C Transcription elongatio 98.3 5.4E-07 1.8E-11 78.5 5.3 79 44-125 3-96 (96)
28 1vcb_B Protein (elongin C); tu 97.8 2.2E-05 7.4E-10 70.4 5.0 80 43-125 18-112 (112)
29 3drz_A BTB/POZ domain-containi 97.7 7.9E-05 2.7E-09 65.9 8.2 93 43-144 7-106 (107)
30 2eqx_A Kelch repeat and BTB do 97.5 3.2E-05 1.1E-09 67.9 2.3 88 157-289 10-99 (105)
31 3drx_A BTB/POZ domain-containi 96.4 0.005 1.7E-07 60.5 7.0 94 43-145 13-113 (202)
32 3kvt_A Potassium channel prote 95.2 0.0067 2.3E-07 54.4 1.9 82 44-128 7-92 (115)
33 1t1d_A Protein (potassium chan 93.9 0.05 1.7E-06 47.5 4.3 82 44-128 3-89 (100)
34 1s1g_A Potassium voltage-gated 93.7 0.049 1.7E-06 49.4 4.2 81 42-128 13-99 (124)
35 1nn7_A Potassium channel KV4.2 92.3 0.043 1.5E-06 48.2 1.5 85 44-139 2-92 (105)
36 2nz0_B Potassium voltage-gated 92.0 0.056 1.9E-06 50.1 2.0 82 41-128 34-121 (140)
37 1pd7_B MAD1; PAH2, SIN3, eukar 68.5 1.3 4.6E-05 29.2 0.5 17 111-127 3-19 (26)
38 2r9r_B Paddle chimera voltage 58.9 8.2 0.00028 42.5 4.9 84 42-128 52-140 (514)
39 2yy0_A C-MYC-binding protein; 49.0 15 0.00053 28.2 3.6 29 527-555 20-48 (53)
40 1vjh_A BET V I allergen family 44.8 14 0.00049 32.6 3.3 33 403-446 90-122 (122)
41 2eqx_A Kelch repeat and BTB do 41.2 20 0.0007 30.5 3.6 37 104-146 4-40 (105)
42 1deb_A APC protein, adenomatou 36.4 15 0.00051 28.1 1.6 28 528-555 12-39 (54)
43 2yy0_A C-MYC-binding protein; 34.6 31 0.0011 26.5 3.3 24 532-555 18-41 (53)
44 3b0b_C CENP-X, centromere prot 26.0 57 0.002 27.2 3.7 43 349-404 6-48 (81)
45 3htm_A Speckle-type POZ protei 23.7 47 0.0016 29.8 3.1 46 92-146 119-164 (172)
46 3fs7_A Parvalbumin, thymic; ca 23.5 2.4E+02 0.0081 22.6 7.3 59 406-468 21-82 (109)
47 2l5g_B Putative uncharacterize 23.2 84 0.0029 23.1 3.6 28 529-556 12-39 (42)
48 4dra_E Centromere protein X; D 20.7 61 0.0021 27.3 2.9 43 349-404 10-52 (84)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.97 E-value=2.8e-31 Score=268.02 Aligned_cols=233 Identities=12% Similarity=0.142 Sum_probs=174.1
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCC-C--CCCCceEEeCCCCCCHHHHHHHHHHhcCC
Q 006971 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-S--EADLSVIEIPDVPGGAEAFELAAKFCYGI 104 (623)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~-~--e~~~~~I~L~~~PGgae~Felv~~FcY~~ 104 (623)
..++...++.++.+|||+|.|||+.|++||.+|+++|+||++||++. . ++...+|.|++++ +++|+.+++|+|||
T Consensus 18 l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt~ 95 (256)
T 3hve_A 18 LLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSG 95 (256)
T ss_dssp HHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccCC
Confidence 45666789999999999999999999999999999999999999976 3 5666789999995 99999999999999
Q ss_pred CccCCchhHhhHHHhhhhhccccccccchHHHHHHHHHHHhhhhchhhHHHHHhhhhcHHHHHHHhchhhHHHHHHHHHH
Q 006971 105 NFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVALTSLTGAVTVLHKSQGLLPIAEKVKLVGQCIDAIAYIA 184 (623)
Q Consensus 105 ~i~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~sw~~sl~~L~~C~~l~~~Ae~~~iv~rCidsLa~kA 184 (623)
++.|+.+||..|+.||++|||++ |++.|+.||.+.+. ..||..++.+|+.|++ +.|..++
T Consensus 96 ~~~i~~~~v~~ll~~A~~l~i~~------l~~~c~~~L~~~l~---------~~n~~~i~~~A~~~~~-----~~L~~~~ 155 (256)
T 3hve_A 96 QIRLNEDTIQDVVQAADLLLLTD------LKTLCCEFLEGCIA---------AENCIGIRDFALHYCL-----HHVHYLA 155 (256)
T ss_dssp CCCCC-CCHHHHHHHHHHHTCHH------HHHHHHHHHHHTCC---------SSTTHHHHHHHHHTTC-----HHHHHHH
T ss_pred CCcccHhHHHHHHHHHHHHChHH------HHHHHHHHHHhhCC---------HhhHHHHHHHHHHcCc-----HHHHHHH
Confidence 99999999999999999999999 99999999999874 5699999999999985 4444433
Q ss_pred hhc--ccCCCCCCCCCCCCCcCCCCCCCCCCCccchhhhhhcCChHHHHHHHHHHHhcCCCchhHHHHHHHHHHhhcccc
Q 006971 185 CKE--NQFSGSGRAESGTDNAISDMVSHPKTIVDWWAEDLTVLRIDVFQRVLIAMMARGFKQYALGPVLMLYAQKSLRGL 262 (623)
Q Consensus 185 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~dWW~EDl~~Ls~d~f~rVI~am~~~g~~~e~I~~aL~~Yak~~l~~~ 262 (623)
... .+|. .-+-.++|..|+.+.+..++....-...+|+.|+++++.|+++..+.+
T Consensus 156 ~~~i~~~f~-----------------------~v~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~~R 212 (256)
T 3hve_A 156 TEYLETHFR-----------------------DVSSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTEIR 212 (256)
T ss_dssp HHHHHHHHH-----------------------HHTTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC--CCS
T ss_pred HHHHHHHHH-----------------------HHhCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCHHHH
Confidence 221 1111 002258999999998777777654444479999999999998876644
Q ss_pred cccCCCCCCCCcchhHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhhhcCC-HHhHHHHHH
Q 006971 263 EVFGKGRKKIEPHQEHEKRVVLETIVSLLPRERNAMSVSFLSVLLRAAIYLETT-VACRLDLEK 325 (623)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~r~LLEtIv~lLP~~k~~vs~~fL~~LLr~a~~l~aS-~~Cr~~LEk 325 (623)
. .+...|++.|+ + +.+|+.||...++...++..+ +.|+..|++
T Consensus 213 ~--------------~~~~~ll~~VR--f----~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~~ 256 (256)
T 3hve_A 213 K--------------VHMKDVMSALW--V----SGLDSSYLREQMLNEPLVREIVKECSNIPLS 256 (256)
T ss_dssp T--------------TTHHHHHHHHH--H----HTTCC-CHHHHHHTSTTHHHHHCC-------
T ss_pred H--------------HHHHHHHHhCC--C----CCCCHHHHHHHHhcChHHHhhHHHHHHHhhC
Confidence 2 46678999999 4 468999999999999999988 689998875
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.96 E-value=1.6e-30 Score=265.83 Aligned_cols=238 Identities=16% Similarity=0.194 Sum_probs=189.6
Q ss_pred HHhhHHHHhhcCCCeeEEEEEC---CEEEeeccccccccChHHHHhhcCC-CCCCCceEEeC------CCCCCHHHHHHH
Q 006971 28 MKRTSEWIFSQEIPSDVTVHVG---GTSFSLHKFPLVSKCGYIRKLVSVS-SEADLSVIEIP------DVPGGAEAFELA 97 (623)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~I~V~---~~~F~lHK~vLas~S~Yfr~lf~~~-~e~~~~~I~L~------~~PGgae~Felv 97 (623)
..++.+.+|.+|.+|||+|.|| |+.|++||.+|+++|+||++||++. +|+...+|+|+ ++ ++++|+.+
T Consensus 19 ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v--~~~~f~~l 96 (279)
T 3i3n_A 19 LSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGP--EPDTVEAV 96 (279)
T ss_dssp HHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCS--CHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCC--CHHHHHHH
Confidence 4455778999999999999998 9999999999999999999999987 67777899998 66 49999999
Q ss_pred HHHhcCCCccCCchhHhhHHHhhhhhccccccccchHHHHHHHHHHHhhhhchhhHHHHHhhhhcHHHHHHHhchhhHHH
Q 006971 98 AKFCYGINFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVALTSLTGAVTVLHKSQGLLPIAEKVKLVGQCI 177 (623)
Q Consensus 98 ~~FcY~~~i~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~sw~~sl~~L~~C~~l~~~Ae~~~iv~rCi 177 (623)
++|+|||++.|+.+||..|+.||++|||++ |++.|+.||.+.+. ..||..++.+|+.|++
T Consensus 97 l~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~~c~~~L~~~l~---------~~n~~~i~~~A~~~~~----- 156 (279)
T 3i3n_A 97 IEYMYTGRIRVSTGSVHEVLELADRFLLIR------LKEFCGEFLKKKLH---------LSNCVAIHSLAHMYTL----- 156 (279)
T ss_dssp HHHHHHSEEEEETTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHCC---------TTTHHHHHHHHHHTTC-----
T ss_pred HHhhCcCCcccCHHHHHHHHHHHHHHCcHH------HHHHHHHHHHHcCC---------cchHHHHHHHHHHcCc-----
Confidence 999999999999999999999999999999 99999999999874 5699999999999985
Q ss_pred HHHHHHHhhc--ccCCCCCCCCCCCCCcCCCCCCCCCCCccchhhhhhcCChHHHHHHHHHHHhcCCCchhHHHHHHHHH
Q 006971 178 DAIAYIACKE--NQFSGSGRAESGTDNAISDMVSHPKTIVDWWAEDLTVLRIDVFQRVLIAMMARGFKQYALGPVLMLYA 255 (623)
Q Consensus 178 dsLa~kA~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~dWW~EDl~~Ls~d~f~rVI~am~~~g~~~e~I~~aL~~Ya 255 (623)
+.|..++... .+|. .-+-.++|..|+.+.+..++....-...+|+.|+++++.|+
T Consensus 157 ~~L~~~~~~~i~~~f~-----------------------~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~ 213 (279)
T 3i3n_A 157 SQLALKAADMIRRNFH-----------------------KVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWV 213 (279)
T ss_dssp HHHHHHHHHHHHHTHH-----------------------HHTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-----------------------HHhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHH
Confidence 4444433221 1111 01235789999999766666554333337999999999999
Q ss_pred HhhcccccccCCCCCCCCcchhHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhhhcCCHHhHHHHHHHHHhc
Q 006971 256 QKSLRGLEVFGKGRKKIEPHQEHEKRVVLETIVSLLPRERNAMSVSFLSVLLRAAIYLETTVACRLDLEKRMALQ 330 (623)
Q Consensus 256 k~~l~~~~~~~~~~~~~~~~~~~~~r~LLEtIv~lLP~~k~~vs~~fL~~LLr~a~~l~aS~~Cr~~LEkrIg~q 330 (623)
++..+.+. .....|++.|+ + +.+|+.||..+++...++..++.|+..|.+..--+
T Consensus 214 ~~~~~~r~--------------~~~~~ll~~VR--f----~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~ 268 (279)
T 3i3n_A 214 QRNAEERE--------------RYFEELFKLLR--L----SQMKPTYLTRHVKPERLVANNEVCVKLVADAVERH 268 (279)
T ss_dssp HTTHHHHT--------------TTHHHHHTTSC--G----GGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHH
T ss_pred HcCHHHHH--------------HHHHHHHHhcC--C----CCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhc
Confidence 98766432 45677888888 5 47999999999999999999999999888765433
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.88 E-value=1.1e-22 Score=192.21 Aligned_cols=132 Identities=17% Similarity=0.168 Sum_probs=120.1
Q ss_pred chHHHHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCC-CCCCCceEEeCCCCCCHHHHHHHHHHhc
Q 006971 24 LSTAMKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-SEADLSVIEIPDVPGGAEAFELAAKFCY 102 (623)
Q Consensus 24 ~~~~~~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~-~e~~~~~I~L~~~PGgae~Felv~~FcY 102 (623)
|.+........++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .|+....|.|++++ +++|+.+++|+|
T Consensus 17 p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~~Y 94 (172)
T 3htm_A 17 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIY 94 (172)
T ss_dssp CCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHHHh
Confidence 334445566788899999999999999999999999999999999999986 67777899999995 999999999999
Q ss_pred CCCccCCchhHhhHHHhhhhhccccccccchHHHHHHHHHHHhhhhchhhHHHHHhhhhcHHHHHHHhch
Q 006971 103 GINFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVALTSLTGAVTVLHKSQGLLPIAEKVKL 172 (623)
Q Consensus 103 ~~~i~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~sw~~sl~~L~~C~~l~~~Ae~~~i 172 (623)
|+++.++.+|+..|+.+|++|+|++ |++.|+.||.+.+. ..||..++.+|+.|++
T Consensus 95 t~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l~---------~~n~~~~~~~A~~~~~ 149 (172)
T 3htm_A 95 TGKAPNLDKMADDLLAAADKYALER------LKVMCEDALCSNLS---------VENAAEILILADLHSA 149 (172)
T ss_dssp HSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHHHHHHTCC---------TTTHHHHHHHHHHTTC
T ss_pred CCCCCCcHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhCC---------HHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999 99999999999873 5699999999999985
No 4
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.87 E-value=3.4e-23 Score=190.37 Aligned_cols=132 Identities=17% Similarity=0.171 Sum_probs=99.8
Q ss_pred chHHHHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCC-CCCCCceEEeCCCCCCHHHHHHHHHHhc
Q 006971 24 LSTAMKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-SEADLSVIEIPDVPGGAEAFELAAKFCY 102 (623)
Q Consensus 24 ~~~~~~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~-~e~~~~~I~L~~~PGgae~Felv~~FcY 102 (623)
|.+........++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .++....|.|++++ +++|+.+++|+|
T Consensus 8 p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~~~~~l~~~Y 85 (145)
T 4eoz_A 8 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIY 85 (145)
T ss_dssp CCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSC--HHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCC--HHHHHHHHHhhc
Confidence 333345566788889999999999999999999999999999999999986 45556789999995 999999999999
Q ss_pred CCCccCCchhHhhHHHhhhhhccccccccchHHHHHHHHHHHhhhhchhhHHHHHhhhhcHHHHHHHhch
Q 006971 103 GINFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVALTSLTGAVTVLHKSQGLLPIAEKVKL 172 (623)
Q Consensus 103 ~~~i~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~sw~~sl~~L~~C~~l~~~Ae~~~i 172 (623)
||++.++.+|+..|+.+|++|+|++ |++.|+.||.+.+ ...||..++.+|+.|++
T Consensus 86 ~~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l---------~~~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 86 TGKAPNLDKMADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSA 140 (145)
T ss_dssp HSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHCC-------------------------------
T ss_pred cCccCCcHHHHHHHHHHHHHhCHHH------HHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCH
Confidence 9999999999999999999999999 9999999999887 46799999999999975
No 5
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.86 E-value=8e-22 Score=176.78 Aligned_cols=107 Identities=25% Similarity=0.317 Sum_probs=96.8
Q ss_pred HhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCC-CCCCCceEEeCCCCCCHHHHHHHHHHhcCCCcc
Q 006971 29 KRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-SEADLSVIEIPDVPGGAEAFELAAKFCYGINFE 107 (623)
Q Consensus 29 ~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~-~e~~~~~I~L~~~PGgae~Felv~~FcY~~~i~ 107 (623)
.+....++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .|+....|.|++++ +++|+.+++|+|||++.
T Consensus 13 ~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt~~~~ 90 (120)
T 2if5_A 13 LSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYTATLT 90 (120)
T ss_dssp HHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcCCCCc
Confidence 3455678899999999999999999999999999999999999986 56667789999995 99999999999999999
Q ss_pred CCchhHhhHHHhhhhhccccccccchHHHHHHHHHH
Q 006971 108 INTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLN 143 (623)
Q Consensus 108 It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 143 (623)
++.+|+..|+.||++|+|++ |++.|++||+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~------L~~~C~~~L~ 120 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPA------VSHVCADLLD 120 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHH------HHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHH------HHHHHHHHhC
Confidence 99999999999999999999 9999999984
No 6
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.86 E-value=4.6e-22 Score=175.00 Aligned_cols=103 Identities=23% Similarity=0.358 Sum_probs=93.0
Q ss_pred HhhcCCCeeEEEEECC----EEEeeccccccccChHHHHhhcCC-CCCCCceEEeCCCCCCHHHHHHHHHHhcCCCccCC
Q 006971 35 IFSQEIPSDVTVHVGG----TSFSLHKFPLVSKCGYIRKLVSVS-SEADLSVIEIPDVPGGAEAFELAAKFCYGINFEIN 109 (623)
Q Consensus 35 ~r~~~~~~DV~I~V~~----~~F~lHK~vLas~S~Yfr~lf~~~-~e~~~~~I~L~~~PGgae~Felv~~FcY~~~i~It 109 (623)
++.++.+|||+|.|+| +.|++||.+|+++|+||++||.+. .|+. ..|.|++++ +++|+.+++|+||+++.++
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~--~~~f~~~l~~iYt~~~~~~ 78 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVE--PAAFLILLKYMYSDEIDLE 78 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSC--HHHHHHHHHHHHHCCCCCC
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCC--HHHHHHHHHHHcCCCccCC
Confidence 5678999999999998 999999999999999999999986 5555 789999995 9999999999999999999
Q ss_pred chhHhhHHHhhhhhccccccccchHHHHHHHHHHHhh
Q 006971 110 TENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVA 146 (623)
Q Consensus 110 ~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 146 (623)
.+||..|+.+|++|+|++ |++.|+.||.+.+
T Consensus 79 ~~~~~~ll~~A~~~~~~~------L~~~c~~~l~~~l 109 (109)
T 2vkp_A 79 ADTVLATLYAAKKYIVPA------LAKACVNFLETSL 109 (109)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHhhC
Confidence 999999999999999999 9999999998753
No 7
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.86 E-value=4e-22 Score=179.33 Aligned_cols=106 Identities=21% Similarity=0.211 Sum_probs=96.2
Q ss_pred HhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEEeCCCCCCHHHHHHHHHHhcCCCccC
Q 006971 29 KRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGINFEI 108 (623)
Q Consensus 29 ~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~~e~~~~~I~L~~~PGgae~Felv~~FcY~~~i~I 108 (623)
.++...++.++.+|||+|.|||+.|++||.+|+++|+||++||.+.. ...|.|++++ +++|+.+++|+|||++.+
T Consensus 12 ~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~~--~~~f~~ll~~iYtg~~~~ 86 (119)
T 3b84_A 12 LQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS---GGSVVLPAGF--AEIFGLLLDFFYTGHLAL 86 (119)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT---CCCEEECGGG--HHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC---CCeEEeCCCC--HHHHHHHHHHHcCCCCcc
Confidence 34566789999999999999999999999999999999999998754 4579999996 999999999999999999
Q ss_pred CchhHhhHHHhhhhhccccccccchHHHHHHHHHHHh
Q 006971 109 NTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEV 145 (623)
Q Consensus 109 t~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~ 145 (623)
+.+||..|+.||++|+|++ |++.|++||.+.
T Consensus 87 ~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~ 117 (119)
T 3b84_A 87 TSGNRDQVLLAARELRVPE------AVELCQSFKPKT 117 (119)
T ss_dssp CTTTHHHHHHHHHHTTCHH------HHHHHHHCC---
T ss_pred CHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHc
Confidence 9999999999999999999 999999999764
No 8
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.86 E-value=8.5e-22 Score=175.84 Aligned_cols=105 Identities=19% Similarity=0.291 Sum_probs=95.8
Q ss_pred HhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEEeC--CCCCCHHHHHHHHHHhcCCCc
Q 006971 29 KRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIP--DVPGGAEAFELAAKFCYGINF 106 (623)
Q Consensus 29 ~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~~e~~~~~I~L~--~~PGgae~Felv~~FcY~~~i 106 (623)
.++...++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ....|.|+ +++ +++|+.+++|+|||++
T Consensus 10 ~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~---~~~~i~l~~~~~~--~~~f~~ll~~~Yt~~~ 84 (116)
T 2vpk_A 10 LERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST---SENNVFLDQSQVK--ADGFQKLLEFIYTGTL 84 (116)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC---CCSCEECCTTTCC--HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC---CCCeEEeecCCCC--HHHHHHHHHHHcCCCc
Confidence 3556788999999999999999999999999999999999999976 24568887 885 9999999999999999
Q ss_pred cCCchhHhhHHHhhhhhccccccccchHHHHHHHHHHH
Q 006971 107 EINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNE 144 (623)
Q Consensus 107 ~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 144 (623)
.++.+||..|+.||++|||++ |++.|++||.+
T Consensus 85 ~~~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (116)
T 2vpk_A 85 NLDSWNVKEIHQAADYLKVEE------VVTKCKIKMED 116 (116)
T ss_dssp CCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHC-
T ss_pred ccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHhC
Confidence 999999999999999999999 99999999853
No 9
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.85 E-value=1.3e-21 Score=176.26 Aligned_cols=106 Identities=16% Similarity=0.221 Sum_probs=98.1
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEEeCCCCCCHHHHHHHHHHhcCCCcc
Q 006971 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGINFE 107 (623)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~~e~~~~~I~L~~~PGgae~Felv~~FcY~~~i~ 107 (623)
..+....++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ..+|.|++++ +++|+.+++|+|||++.
T Consensus 15 l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~ 88 (121)
T 1buo_A 15 LLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN----SQHYTLDFLS--PKTFQQILEYAYTATLQ 88 (121)
T ss_dssp HHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC----CcEEEeCCCC--HHHHHHHHHhhcCCCcC
Confidence 34556678899999999999999999999999999999999999864 3579999996 99999999999999999
Q ss_pred CCchhHhhHHHhhhhhccccccccchHHHHHHHHHHHh
Q 006971 108 INTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEV 145 (623)
Q Consensus 108 It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~ 145 (623)
++.+|+..|+.||++|+|++ |++.|++||.+.
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~~ 120 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEY------LEEQCLKMLETI 120 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHH------HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHh
Confidence 99999999999999999999 999999999875
No 10
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.85 E-value=1.4e-21 Score=177.16 Aligned_cols=108 Identities=23% Similarity=0.436 Sum_probs=99.9
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCC-CCCCCceEEe-CCCCCCHHHHHHHHHHhcCCC
Q 006971 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-SEADLSVIEI-PDVPGGAEAFELAAKFCYGIN 105 (623)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~-~e~~~~~I~L-~~~PGgae~Felv~~FcY~~~ 105 (623)
..+....++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .| ....|.| ++++ +++|+.+++|+|||+
T Consensus 16 l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~--~~~f~~ll~~~Ytg~ 92 (127)
T 1r29_A 16 VLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEIN--PEGFNILLDFMYTSR 92 (127)
T ss_dssp HHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSC--HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCC--HHHHHHHHHHHcCCC
Confidence 34556678899999999999999999999999999999999999987 45 6678999 8995 999999999999999
Q ss_pred ccCCchhHhhHHHhhhhhccccccccchHHHHHHHHHHH
Q 006971 106 FEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNE 144 (623)
Q Consensus 106 i~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 144 (623)
+.++.+||..|+.||++|+|++ |++.|+.||.+
T Consensus 93 ~~~~~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~ 125 (127)
T 1r29_A 93 LNLREGNIMAVMATAMYLQMEH------VVDTCRKFIKA 125 (127)
T ss_dssp CCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHT
T ss_pred cCcCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHh
Confidence 9999999999999999999999 99999999975
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.85 E-value=6.4e-22 Score=182.14 Aligned_cols=109 Identities=18% Similarity=0.227 Sum_probs=95.6
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEEeCCCCCCHHHHHHHHHHhcCCCcc
Q 006971 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGINFE 107 (623)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~~e~~~~~I~L~~~PGgae~Felv~~FcY~~~i~ 107 (623)
..+....++.++.+|||+|.|+|+.|++||.+|+++|+||++||.... ...|.|++++ +++|+.+++|+||+++.
T Consensus 12 l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~---~~~i~l~~~~--~~~f~~lL~fiYtg~~~ 86 (135)
T 2yy9_A 12 VLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT---GGSVVLPAGF--AEIFGLLLDFFYTGHLA 86 (135)
T ss_dssp HHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-------CCEEECGGG--HHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC---CCeEEeCCCC--HHHHHHHHHHHhCCCCC
Confidence 345567899999999999999999999999999999999999998754 4579999996 99999999999999999
Q ss_pred CCchhHhhHHHhhhhhccccccccchHHHHHHHHHHHhhh
Q 006971 108 INTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVAL 147 (623)
Q Consensus 108 It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~ 147 (623)
|+.+||..|+.||++|||++ |++.|++||.+.+.
T Consensus 87 i~~~~v~~ll~~A~~l~i~~------L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 87 LTSGNRDQVLLAAKELRVPE------AVELCQSFQPQTSV 120 (135)
T ss_dssp CCTTTHHHHHHHHHHTTCHH------HHHHHHHCCC----
T ss_pred CCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhcc
Confidence 99999999999999999999 99999999988763
No 12
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.84 E-value=2e-21 Score=179.13 Aligned_cols=114 Identities=22% Similarity=0.320 Sum_probs=101.8
Q ss_pred hHHHHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEEeC-CCCCCHHHHHHHHHHhcC
Q 006971 25 STAMKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIP-DVPGGAEAFELAAKFCYG 103 (623)
Q Consensus 25 ~~~~~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~~e~~~~~I~L~-~~PGgae~Felv~~FcY~ 103 (623)
.....+....++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+.... ...|.|+ +++ +++|+.+++|+||
T Consensus 20 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~v~--~~~~~~lL~~~Yt 96 (138)
T 2z8h_A 20 STNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA-ELTVTLPEEVT--VKGFEPLIQFAYT 96 (138)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT-TEEEECCTTSC--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC-CceEEeCCCCC--HHHHHHHHHHhcC
Confidence 34455667789999999999999999999999999999999999999986321 3478884 885 9999999999999
Q ss_pred CCccCCchhHhhHHHhhhhhccccccccchHHHHHHHHHHHhhh
Q 006971 104 INFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVAL 147 (623)
Q Consensus 104 ~~i~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~ 147 (623)
|++.|+.+||..|+.||++|||++ |++.|++||.+.+.
T Consensus 97 g~~~i~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 97 AKLILSKDNVDEVCRCVEFLSVHN------IEESCFQFLKFKFL 134 (138)
T ss_dssp SCCCCCTTTHHHHHHHHHHHTCGG------GHHHHHHHTTCCCS
T ss_pred CCcccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHhcc
Confidence 999999999999999999999999 99999999988764
No 13
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.84 E-value=1.9e-21 Score=181.18 Aligned_cols=108 Identities=15% Similarity=0.238 Sum_probs=95.3
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCC-C--CCCCceEEeCCCCCCHHHHHHHHHHhcCC
Q 006971 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-S--EADLSVIEIPDVPGGAEAFELAAKFCYGI 104 (623)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~-~--e~~~~~I~L~~~PGgae~Felv~~FcY~~ 104 (623)
..+....++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. . ++....|.|++++ +++|+.+++|+|||
T Consensus 34 l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg 111 (144)
T 2ppi_A 34 LLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSG 111 (144)
T ss_dssp HHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCC
Confidence 34556678999999999999999999999999999999999999875 2 3566789999996 99999999999999
Q ss_pred CccCCchhHhhHHHhhhhhccccccccchHHHHHHHHHH
Q 006971 105 NFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLN 143 (623)
Q Consensus 105 ~i~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 143 (623)
++.++.+||..|+.||++|+|++ |++.|++||.
T Consensus 112 ~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~~L~ 144 (144)
T 2ppi_A 112 QIRLNEDTIQDVVQAADLLLLTD------LKTLCCEFLE 144 (144)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHH------HHHHHHTTC-
T ss_pred CCCCCHHHHHHHHHHHHHhCcHH------HHHHHHHHhC
Confidence 99999999999999999999999 9999999974
No 14
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.84 E-value=1.8e-21 Score=175.00 Aligned_cols=103 Identities=21% Similarity=0.292 Sum_probs=94.6
Q ss_pred HhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEEeCCCCCCHHHHHHHHHHhcCCCccC
Q 006971 29 KRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGINFEI 108 (623)
Q Consensus 29 ~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~~e~~~~~I~L~~~PGgae~Felv~~FcY~~~i~I 108 (623)
.+..+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||++. ...|.|++++ +++|+.+++|+|||++.+
T Consensus 15 ~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~i 88 (119)
T 2q81_A 15 LEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ----KDVVHLDISN--AAGLGQVLEFMYTAKLSL 88 (119)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC----CSGGGGGGCC--HHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHHHcCCCCcc
Confidence 3455688999999999999999999999999999999999999863 3467888885 999999999999999999
Q ss_pred CchhHhhHHHhhhhhccccccccchHHHHHHHHHH
Q 006971 109 NTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLN 143 (623)
Q Consensus 109 t~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 143 (623)
+.+||..|+.||++|||++ |++.|++||.
T Consensus 89 ~~~~~~~ll~~A~~l~i~~------L~~~C~~~l~ 117 (119)
T 2q81_A 89 SPENVDDVLAVATFLQMQD------IITACHALKS 117 (119)
T ss_dssp CTTTHHHHHHHHHHTTCHH------HHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCHH------HHHHHHHHHh
Confidence 9999999999999999999 9999999985
No 15
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.83 E-value=1.2e-21 Score=178.38 Aligned_cols=107 Identities=25% Similarity=0.425 Sum_probs=91.6
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEEeC-CCCCCHHHHHHHHHHhcCCCc
Q 006971 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIP-DVPGGAEAFELAAKFCYGINF 106 (623)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~~e~~~~~I~L~-~~PGgae~Felv~~FcY~~~i 106 (623)
..+....++.++.+|||+|.|+|+.|++||.+|+++|+||++||... ....|.|+ +++ +++|+.+++|+|||++
T Consensus 20 l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~---~~~~i~l~~~~~--~~~f~~ll~~iYtg~~ 94 (129)
T 3ga1_A 20 ILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS---RSAVVELPAAVQ--PQSFQQILSFCYTGRL 94 (129)
T ss_dssp HHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC---CCSEEECCTTCC--HHHHHHHHHHHHHSEE
T ss_pred HHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC---CCCEEEECCCCC--HHHHHHHHHHHhCCcc
Confidence 34556678889999999999999999999999999999999999876 44689996 895 9999999999999999
Q ss_pred cCCchhHhhHHHhhhhhccccccccchHHHHHHHHHHHh
Q 006971 107 EINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEV 145 (623)
Q Consensus 107 ~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~ 145 (623)
.++.+||..|+.||++|||++ |++.|++||.+.
T Consensus 95 ~i~~~~~~~ll~~A~~~~i~~------l~~~C~~~L~~~ 127 (129)
T 3ga1_A 95 SMNVGDQDLLMYTAGFLQIQE------IMEKGTEFFLKV 127 (129)
T ss_dssp ECCTTTHHHHHHHHHHTTBTT------SSCC--------
T ss_pred ccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHh
Confidence 999999999999999999999 999999999875
No 16
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.83 E-value=1.3e-21 Score=176.94 Aligned_cols=106 Identities=23% Similarity=0.313 Sum_probs=96.2
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEEeCC-CCCCHHHHHHHHHHhcCCCc
Q 006971 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPD-VPGGAEAFELAAKFCYGINF 106 (623)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~~e~~~~~I~L~~-~PGgae~Felv~~FcY~~~i 106 (623)
..++...++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+.... ...|.|++ ++ +++|+.+++|+|||++
T Consensus 19 l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~~~--~~~f~~~l~~iYtg~~ 95 (125)
T 3ohu_A 19 ILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN-DLVVSLPEEVT--ARGFGPLLQFAYTAKL 95 (125)
T ss_dssp HHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS-SCEEECCTTCC--HHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC-CcEEEeCCCCC--HHHHHHHHHhHcCCce
Confidence 45566788999999999999999999999999999999999999986322 56799988 85 9999999999999999
Q ss_pred cCCchhHhhHHHhhhhhccccccccchHHHHHHHHH
Q 006971 107 EINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYL 142 (623)
Q Consensus 107 ~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL 142 (623)
.++.+||..|+.||++|+|++ |++.|++||
T Consensus 96 ~~~~~~v~~ll~~A~~l~i~~------L~~~C~~~L 125 (125)
T 3ohu_A 96 LLSRENIREVIRCAEFLRMHN------LEDSCFSFL 125 (125)
T ss_dssp EECTTTHHHHHHHHHHHTBSS------CTTSSCCCC
T ss_pred EECHHHHHHHHHHHHHhCCHH------HHHHHHHhC
Confidence 999999999999999999999 889998875
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.82 E-value=2e-21 Score=175.95 Aligned_cols=110 Identities=21% Similarity=0.312 Sum_probs=96.9
Q ss_pred hHHHHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEEe-CCCCCCHHHHHHHHHHhcC
Q 006971 25 STAMKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEI-PDVPGGAEAFELAAKFCYG 103 (623)
Q Consensus 25 ~~~~~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~~e~~~~~I~L-~~~PGgae~Felv~~FcY~ 103 (623)
.....+....++.++.+|||+|.|+|+.|++||.+|+++|+||++||++... +...|.| .+++ +++|+.+++|+||
T Consensus 13 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~-e~~~i~l~~~v~--~~~f~~lL~~iYt 89 (124)
T 2ihc_A 13 STNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQAD-GELNITLPEEVT--VKGFEPLIQFAYT 89 (124)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC----CEEEECCTTSC--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCC-CCceEeecCCcC--HHHHHHHHHHhcC
Confidence 3345566778999999999999999999999999999999999999998632 1257888 4885 9999999999999
Q ss_pred CCccCCchhHhhHHHhhhhhccccccccchHHHHHHHHHH
Q 006971 104 INFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLN 143 (623)
Q Consensus 104 ~~i~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 143 (623)
|++.++.+||..|+.||++|||++ |++.|++||.
T Consensus 90 g~~~i~~~~v~~ll~~A~~~~~~~------L~~~C~~~l~ 123 (124)
T 2ihc_A 90 AKLILSKENVDEVCKCVEFLSVHN------IEESCFQFLK 123 (124)
T ss_dssp SEEEEETTTHHHHHHHHHHHTBSS------CCGGGGGTC-
T ss_pred CCcccCHHHHHHHHHHHHHHCCHH------HHHHHHHHHh
Confidence 999999999999999999999999 9999999875
No 18
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.82 E-value=6.4e-21 Score=172.54 Aligned_cols=95 Identities=16% Similarity=0.165 Sum_probs=86.3
Q ss_pred HhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEEeCCCCCCHHHHHHHHHHhcCCCccCCchhHh
Q 006971 35 IFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGINFEINTENVA 114 (623)
Q Consensus 35 ~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~~e~~~~~I~L~~~PGgae~Felv~~FcY~~~i~It~~NV~ 114 (623)
.|.++.+|||+|.|+|+.|++||.+|+++|+||++ ....|+|++++ +++|+.+++|+|||++.|+.+||.
T Consensus 24 ~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--------~~~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~ 93 (119)
T 3m5b_A 24 ARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR--------RGQWALGEGIS--PSTFAQLLNFVYGESVELQPGELR 93 (119)
T ss_dssp HHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC--------CEEEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHH
T ss_pred HHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc--------CCCEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHH
Confidence 36789999999999999999999999999999985 23578999995 999999999999999999999999
Q ss_pred hHHHhhhhhccccccccchHHHHHHHHHHHh
Q 006971 115 GLRCVAEYLEMTEDYAVGNLVGRAEAYLNEV 145 (623)
Q Consensus 115 ~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~ 145 (623)
.|+.||++|||+. |++.|++++.+.
T Consensus 94 ~ll~aA~~l~i~~------l~~~C~~~~~~~ 118 (119)
T 3m5b_A 94 PLQEAARALGVQS------LEEACWRARGDR 118 (119)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHHC---
T ss_pred HHHHHHHHhCCHH------HHHHHHHHHhhc
Confidence 9999999999999 999999998753
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.81 E-value=3.4e-20 Score=191.92 Aligned_cols=136 Identities=19% Similarity=0.195 Sum_probs=117.8
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCC-CCCCCceEEeCCCCCCHHHHHHHHHHhcCCCc
Q 006971 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-SEADLSVIEIPDVPGGAEAFELAAKFCYGINF 106 (623)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~-~e~~~~~I~L~~~PGgae~Felv~~FcY~~~i 106 (623)
..+....++.++.+|||+|.|+|++|++||.+|+++|+||++||.+. .|+...+|+|++++ +++|+.+++|+||+++
T Consensus 161 l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt~~~ 238 (312)
T 3hqi_A 161 LADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKA 238 (312)
T ss_dssp HHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcCCCC
Confidence 44556678889999999999999999999999999999999999986 67777899999995 9999999999999999
Q ss_pred cCCchhHhhHHHhhhhhccccccccchHHHHHHHHHHHhhhhchhhHHHHHhhhhcHHHHHHHhch---hhHHHHHH
Q 006971 107 EINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVALTSLTGAVTVLHKSQGLLPIAEKVKL---VGQCIDAI 180 (623)
Q Consensus 107 ~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~sw~~sl~~L~~C~~l~~~Ae~~~i---v~rCidsL 180 (623)
.++.+|+..|+.||++|+|+. |+..|+.||.+.+. ..||..++.+|+.|++ .++|++-|
T Consensus 239 ~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~~~---------~~n~~~~l~~A~~~~~~~L~~~~~~~i 300 (312)
T 3hqi_A 239 PNLDKMADDLLAAADKYALER------LKVMCEDALCSNLS---------VENAAEILILADLHSADQLKTQAVDFI 300 (312)
T ss_dssp TTHHHHHHHHHHHHHHTTCHH------HHHHHHHHHHTTCC---------TTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHhCHHH------HHHHHHHHHHccCC---------HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999999999999999999 99999999998763 5699999999999964 34444443
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.78 E-value=3.9e-19 Score=159.58 Aligned_cols=94 Identities=22% Similarity=0.264 Sum_probs=86.8
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEEeCCCCCCHHHHHHHHHHhcCCCc-
Q 006971 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGINF- 106 (623)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~~e~~~~~I~L~~~PGgae~Felv~~FcY~~~i- 106 (623)
..+....++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ...|+|++++ +++|+.+++|+|||++
T Consensus 18 l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~----~~~i~l~~~~--~~~f~~~l~~~Ytg~~~ 91 (116)
T 3fkc_A 18 LLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA----GQVVELSFIR--AEIFAEILNYIYSSKIV 91 (116)
T ss_dssp HHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHhhcCCCcC
Confidence 34556678899999999999999999999999999999999999875 3589999996 9999999999999999
Q ss_pred cCCchhHhhHHHhhhhhcccc
Q 006971 107 EINTENVAGLRCVAEYLEMTE 127 (623)
Q Consensus 107 ~It~~NV~~L~cAA~~LqMte 127 (623)
.++.+||..|+.||++|||+.
T Consensus 92 ~~~~~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 92 RVRSDLLDELIKSGQLLGVKF 112 (116)
T ss_dssp SCCHHHHHHHHHHHHHHTCHH
T ss_pred CCCHHHHHHHHHHHHHhCccc
Confidence 799999999999999999987
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.43 E-value=1.4e-13 Score=130.63 Aligned_cols=95 Identities=15% Similarity=0.281 Sum_probs=83.0
Q ss_pred EEEEE-CCEEEeeccccccccChHHHHhhcC-C-C-CCCCceEEeCCCCCCHHHHHHHHHHhcCCC--------------
Q 006971 44 VTVHV-GGTSFSLHKFPLVSKCGYIRKLVSV-S-S-EADLSVIEIPDVPGGAEAFELAAKFCYGIN-------------- 105 (623)
Q Consensus 44 V~I~V-~~~~F~lHK~vLas~S~Yfr~lf~~-~-~-e~~~~~I~L~~~PGgae~Felv~~FcY~~~-------------- 105 (623)
|+|.. +|+.|.+||.+ |++|+||+.||.. + . |+....|.|++|+ +.+++.|++|||..+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~ 79 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEK 79 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHHTTTCCC----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCccccccccc
Confidence 77765 79999999999 9999999999987 3 3 5556689999996 899999999999887
Q ss_pred ------------ccCCchhHhhHHHhhhhhccccccccchHHHHHHHHHHHhhh
Q 006971 106 ------------FEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVAL 147 (623)
Q Consensus 106 ------------i~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~ 147 (623)
+.|+.+|+..|+.||.||+|.. |++.|+.|+..++.
T Consensus 80 ~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~------Lld~~c~~va~~i~ 127 (159)
T 2ast_A 80 RTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIK 127 (159)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHS
T ss_pred chhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 8999999999999999999999 99999999999873
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.22 E-value=1.8e-11 Score=106.90 Aligned_cols=79 Identities=16% Similarity=0.298 Sum_probs=66.1
Q ss_pred EEEEE-CCEEEeeccccccccChHHHHhhcCC---CCCCCceEEeCCCCCCHHHHHHHHHHhc-----C---CCcc---C
Q 006971 44 VTVHV-GGTSFSLHKFPLVSKCGYIRKLVSVS---SEADLSVIEIPDVPGGAEAFELAAKFCY-----G---INFE---I 108 (623)
Q Consensus 44 V~I~V-~~~~F~lHK~vLas~S~Yfr~lf~~~---~e~~~~~I~L~~~PGgae~Felv~~FcY-----~---~~i~---I 108 (623)
|+|.- +|+.|.+||.+ |+.|+||++||+.. .|+....|.|++|+ +.+++.+++||| + +.+. |
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 45554 68999999999 99999999999973 45556789999996 899999999999 5 6777 9
Q ss_pred CchhHhhHHHhhhhhcc
Q 006971 109 NTENVAGLRCVAEYLEM 125 (623)
Q Consensus 109 t~~NV~~L~cAA~~LqM 125 (623)
+++|+..|+.||+||+.
T Consensus 81 ~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 81 APEIALELLMAANFLDC 97 (97)
T ss_dssp CGGGHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhhhCC
Confidence 99999999999999983
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.12 E-value=8.3e-11 Score=109.52 Aligned_cols=91 Identities=13% Similarity=0.284 Sum_probs=81.8
Q ss_pred EEEEE-CCEEEeeccccccccChHHHHhhcCCCCCCCceEEeCCCCCCHHHHHHHHHHhcCCC-----------------
Q 006971 44 VTVHV-GGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGIN----------------- 105 (623)
Q Consensus 44 V~I~V-~~~~F~lHK~vLas~S~Yfr~lf~~~~e~~~~~I~L~~~PGgae~Felv~~FcY~~~----------------- 105 (623)
|+|.. +|+.|.+|+.+ |..|+||+.||.... ...|.|++|+ +.+++.|++|||..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 77 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG---MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTD 77 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC---CSSEECTTCC--HHHHHHHHHHHHHHTTCC--------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC---CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccchh
Confidence 67776 68999999998 899999999998642 3479999996 799999999999754
Q ss_pred ---------ccCCchhHhhHHHhhhhhccccccccchHHHHHHHHHHHhh
Q 006971 106 ---------FEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVA 146 (623)
Q Consensus 106 ---------i~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 146 (623)
+.++.+++..|+.||.||+|.. |++.|+.|+...+
T Consensus 78 ~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~i 121 (141)
T 1fs1_B 78 DIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMI 121 (141)
T ss_dssp ---HHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHH
Confidence 7899999999999999999999 9999999999987
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.93 E-value=1.4e-10 Score=110.19 Aligned_cols=92 Identities=15% Similarity=0.280 Sum_probs=51.7
Q ss_pred EEEEE-CCEEEeeccccccccChHHHHhhcCCCCCCCceEEeCCCCCCHHHHHHHHHHhcCCC-----------------
Q 006971 44 VTVHV-GGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGIN----------------- 105 (623)
Q Consensus 44 V~I~V-~~~~F~lHK~vLas~S~Yfr~lf~~~~e~~~~~I~L~~~PGgae~Felv~~FcY~~~----------------- 105 (623)
|+|.. +|+.|.+|+.+ |..|+||+.||.... ....|.|++|+ +.+++.|++|||..+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 80 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC--VDNGVPLPNVT--SKILAKVIEYCKRHVEAAASKAEAVEGAATSD 80 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC--------------CCTTSC--HHHHHHHHHC----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC--CCCceeCCcCc--HHHHHHHHHHHHHcccCCCccccccccccccc
Confidence 66664 79999999998 899999999998752 23478999996 799999999999865
Q ss_pred ----------ccCCchhHhhHHHhhhhhccccccccchHHHHHHHHHHHhh
Q 006971 106 ----------FEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVA 146 (623)
Q Consensus 106 ----------i~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 146 (623)
+.++..++..|+.||.||+|.. |++.|+.|+...+
T Consensus 81 ~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~i 125 (160)
T 2p1m_A 81 DDLKAWDADFMKIDQATLFELILAANYLNIKN------LLDLTCQTVADMI 125 (160)
T ss_dssp --------------------CHHHHHHTTCHH------HHHHHHHHHHHTT
T ss_pred chhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHH
Confidence 5789999999999999999999 9999999999987
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.36 E-value=5.3e-07 Score=79.06 Aligned_cols=80 Identities=19% Similarity=0.209 Sum_probs=67.2
Q ss_pred eEEEEE-CCEEEeeccccccccChHHHHhhcCCCCCCCceEEeCCCCCCHHHHHHHHHHhcCCC--------------cc
Q 006971 43 DVTVHV-GGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGIN--------------FE 107 (623)
Q Consensus 43 DV~I~V-~~~~F~lHK~vLas~S~Yfr~lf~~~~e~~~~~I~L~~~PGgae~Felv~~FcY~~~--------------i~ 107 (623)
-|+|.- +|+.|.+|+.+ |..|++|+.|+..+.+.....|.|++|+ +.+++.|++|||.-+ ..
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~e~~~~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~ 81 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRESKGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPEFE 81 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTTCTTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhcccccCCCceecCCcC--HHHHHHHHHHHHHhcccCCCccccccCCCcc
Confidence 367776 79999999997 8999999999987433444689999996 799999999999522 46
Q ss_pred CCchhHhhHHHhhhhhcc
Q 006971 108 INTENVAGLRCVAEYLEM 125 (623)
Q Consensus 108 It~~NV~~L~cAA~~LqM 125 (623)
+..+++..|+.||.||++
T Consensus 82 vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 82 IPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHhCc
Confidence 888999999999999985
No 26
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.33 E-value=9.1e-07 Score=84.76 Aligned_cols=95 Identities=15% Similarity=0.281 Sum_probs=77.9
Q ss_pred eEEEEE-CCEEEeeccccccccChHHHHhhcCCCC-----CCCceEEeCCCCCCHHHHHHHHHHhcCCC-----------
Q 006971 43 DVTVHV-GGTSFSLHKFPLVSKCGYIRKLVSVSSE-----ADLSVIEIPDVPGGAEAFELAAKFCYGIN----------- 105 (623)
Q Consensus 43 DV~I~V-~~~~F~lHK~vLas~S~Yfr~lf~~~~e-----~~~~~I~L~~~PGgae~Felv~~FcY~~~----------- 105 (623)
-|+|+- +|+.|.+++.+ |..|++++.|+..... .....|.|++|+ +.+++.|+.|||--+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCccccccc
Confidence 466665 58999999997 7889999999986421 223679999996 799999999998422
Q ss_pred --------------ccCCchhHhhHHHhhhhhccccccccchHHHHHHHHHHHhh
Q 006971 106 --------------FEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVA 146 (623)
Q Consensus 106 --------------i~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 146 (623)
+.+....+..|+.||.||+|.. |++.||.++...+
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~------Lldl~c~~vA~~i 133 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP------LLDAGCKVVAEMI 133 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 4677889999999999999999 9999999998876
No 27
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.30 E-value=5.4e-07 Score=78.53 Aligned_cols=79 Identities=18% Similarity=0.292 Sum_probs=64.4
Q ss_pred EEEEE-CCEEEeeccccccccChHHHHhhcCC---CCCCCceEEeCCCCCCHHHHHHHHHHhcCCC-----------ccC
Q 006971 44 VTVHV-GGTSFSLHKFPLVSKCGYIRKLVSVS---SEADLSVIEIPDVPGGAEAFELAAKFCYGIN-----------FEI 108 (623)
Q Consensus 44 V~I~V-~~~~F~lHK~vLas~S~Yfr~lf~~~---~e~~~~~I~L~~~PGgae~Felv~~FcY~~~-----------i~I 108 (623)
|+|.- +|+.|.+|+.+ |..|++|+.|+... .|.....|.|++|+ +.+++.|++|||.-+ ..+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~v 79 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 79 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCccc
Confidence 56665 79999999997 89999999999863 34445689999996 799999999998522 478
Q ss_pred CchhHhhHHHhhhhhcc
Q 006971 109 NTENVAGLRCVAEYLEM 125 (623)
Q Consensus 109 t~~NV~~L~cAA~~LqM 125 (623)
..+.+..|+.||.||++
T Consensus 80 d~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 80 APEIALELLMAANFLDC 96 (96)
T ss_dssp CTTTHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 88999999999999985
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.75 E-value=2.2e-05 Score=70.38 Aligned_cols=80 Identities=18% Similarity=0.273 Sum_probs=63.7
Q ss_pred eEEEE-ECCEEEeeccccccccChHHHHhhcCC---CCCCCceEEeCCCCCCHHHHHHHHHHhcCCC-----------cc
Q 006971 43 DVTVH-VGGTSFSLHKFPLVSKCGYIRKLVSVS---SEADLSVIEIPDVPGGAEAFELAAKFCYGIN-----------FE 107 (623)
Q Consensus 43 DV~I~-V~~~~F~lHK~vLas~S~Yfr~lf~~~---~e~~~~~I~L~~~PGgae~Felv~~FcY~~~-----------i~ 107 (623)
-|+|. -+|..|.+++. .|..|+.++.|+... .|.....|.|++|+ +.+++.|++|||--+ ..
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w~ 94 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 94 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCCC
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCcc
Confidence 36666 47999999999 578999999999864 23334589999996 799999999998421 47
Q ss_pred CCchhHhhHHHhhhhhcc
Q 006971 108 INTENVAGLRCVAEYLEM 125 (623)
Q Consensus 108 It~~NV~~L~cAA~~LqM 125 (623)
+...++..|+.||.||++
T Consensus 95 vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 95 IAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 888999999999999985
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.73 E-value=7.9e-05 Score=65.90 Aligned_cols=93 Identities=20% Similarity=0.281 Sum_probs=73.8
Q ss_pred eEEEEECCEEEeeccccccccC-hHHHHhhcCCC-----CCCCceEEeCCCCCCHHHHHHHHHHhcCCCccCCch-hHhh
Q 006971 43 DVTVHVGGTSFSLHKFPLVSKC-GYIRKLVSVSS-----EADLSVIEIPDVPGGAEAFELAAKFCYGINFEINTE-NVAG 115 (623)
Q Consensus 43 DV~I~V~~~~F~lHK~vLas~S-~Yfr~lf~~~~-----e~~~~~I~L~~~PGgae~Felv~~FcY~~~i~It~~-NV~~ 115 (623)
=|+|.|||+.|...+..|.... .+|.+||.... .....++-| |- .|+.|+.|++|..+|++.+..+ .+..
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DR--dp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DR--DPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CS--CHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cC--ChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 4789999999999999999875 57899997641 112335555 34 5899999999999999987543 4578
Q ss_pred HHHhhhhhccccccccchHHHHHHHHHHH
Q 006971 116 LRCVAEYLEMTEDYAVGNLVGRAEAYLNE 144 (623)
Q Consensus 116 L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 144 (623)
++..|+|+++++ |++.|++-+.+
T Consensus 84 l~~Ea~fy~l~~------L~~~l~~~i~~ 106 (107)
T 3drz_A 84 VLEEAEFYNITS------LIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHTCHH------HHHHHHHHHHH
T ss_pred HHHHHHHCCCHH------HHHHHHHHHhc
Confidence 999999999999 99999876653
No 30
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.50 E-value=3.2e-05 Score=67.90 Aligned_cols=88 Identities=6% Similarity=-0.057 Sum_probs=65.3
Q ss_pred HhhhhcHHHHHHHhchhhHHHHHHHHHHhhc--ccCCCCCCCCCCCCCcCCCCCCCCCCCccchhhhhhcCChHHHHHHH
Q 006971 157 LHKSQGLLPIAEKVKLVGQCIDAIAYIACKE--NQFSGSGRAESGTDNAISDMVSHPKTIVDWWAEDLTVLRIDVFQRVL 234 (623)
Q Consensus 157 L~~C~~l~~~Ae~~~iv~rCidsLa~kA~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~dWW~EDl~~Ls~d~f~rVI 234 (623)
..||.+++.+|+.|++ ..|..+|... .+|. .-...+||..|+.+.+..+|
T Consensus 10 ~~NCl~i~~~A~~~~~-----~~L~~~a~~fi~~nF~-----------------------~v~~~~eFl~L~~~~L~~lL 61 (105)
T 2eqx_A 10 VGNCLQVMWLADRHSD-----PELYTAAKHCAKTHLA-----------------------QLQNTEEFLHLPHRLLTDII 61 (105)
T ss_dssp TTTHHHHHHHHHHTTC-----HHHHHHHHHHHHHTCH-----------------------HHHTSHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-----HHHHHHHHHHHHHHHH-----------------------HHHhcccHhhCCHHHHHHHH
Confidence 5699999999999987 6777666442 2221 01236899999999877777
Q ss_pred HHHHhcCCCchhHHHHHHHHHHhhcccccccCCCCCCCCcchhHHHHHHHHHHHH
Q 006971 235 IAMMARGFKQYALGPVLMLYAQKSLRGLEVFGKGRKKIEPHQEHEKRVVLETIVS 289 (623)
Q Consensus 235 ~am~~~g~~~e~I~~aL~~Yak~~l~~~~~~~~~~~~~~~~~~~~~r~LLEtIv~ 289 (623)
+. ...+|+.|++|++.|++++...+ ..+...|+++|+.
T Consensus 62 ~s---dv~~E~~vf~av~~Wv~~d~~~R--------------~~~~~~Ll~~VR~ 99 (105)
T 2eqx_A 62 SD---GVPCSQNPTEAIEAWINFNKEER--------------EAFAESLRTSLKE 99 (105)
T ss_dssp HT---CEETTSCHHHHHHHHHHTTHHHH--------------HHHHHHHHHHCCE
T ss_pred cC---CCCCHHHHHHHHHHHHHcCHHHH--------------HHHHHHHHHHHHH
Confidence 76 34488999999999999887644 2567788888763
No 31
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.41 E-value=0.005 Score=60.49 Aligned_cols=94 Identities=19% Similarity=0.258 Sum_probs=74.0
Q ss_pred eEEEEECCEEEeeccccccccC-hHHHHhhcCCCC-----CCCceEEeCCCCCCHHHHHHHHHHhcCCCccCCch-hHhh
Q 006971 43 DVTVHVGGTSFSLHKFPLVSKC-GYIRKLVSVSSE-----ADLSVIEIPDVPGGAEAFELAAKFCYGINFEINTE-NVAG 115 (623)
Q Consensus 43 DV~I~V~~~~F~lHK~vLas~S-~Yfr~lf~~~~e-----~~~~~I~L~~~PGgae~Felv~~FcY~~~i~It~~-NV~~ 115 (623)
=|+|.|||..|...+..|.... .+|.+||....+ ....++-|. - .|..|+.|++|.-+|++.+..+ .+..
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFID-R--DP~~F~~ILnyLRtG~L~lP~~~~~~~ 89 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLID-R--DPTYFGPVLNYLRHGKLVINKDLAEEG 89 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEEC-S--CSTTHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEec-C--ChHHHHHHHHHhcCCccCCCCCCCHHH
Confidence 4678999999999999998765 488999975411 123355553 2 4799999999999999987543 4577
Q ss_pred HHHhhhhhccccccccchHHHHHHHHHHHh
Q 006971 116 LRCVAEYLEMTEDYAVGNLVGRAEAYLNEV 145 (623)
Q Consensus 116 L~cAA~~LqMte~~~~~NL~~~ce~FL~~~ 145 (623)
++.-|+|+++++ |++.|++-+.+.
T Consensus 90 l~eEA~FygL~~------Lv~~l~~~i~er 113 (202)
T 3drx_A 90 VLEEAEFYNITS------LIKLVKDKIRER 113 (202)
T ss_dssp HHHHHHHTTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHCCcHH------HHHHHHHHHHHH
Confidence 999999999999 999999988754
No 32
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=95.17 E-value=0.0067 Score=54.39 Aligned_cols=82 Identities=13% Similarity=0.098 Sum_probs=63.0
Q ss_pred EEEEECCEEEeeccccccccCh-HHHHhhcCCC--CCCCceEEeCCCCCCHHHHHHHHHHhcCCCccCCch-hHhhHHHh
Q 006971 44 VTVHVGGTSFSLHKFPLVSKCG-YIRKLVSVSS--EADLSVIEIPDVPGGAEAFELAAKFCYGINFEINTE-NVAGLRCV 119 (623)
Q Consensus 44 V~I~V~~~~F~lHK~vLas~S~-Yfr~lf~~~~--e~~~~~I~L~~~PGgae~Felv~~FcY~~~i~It~~-NV~~L~cA 119 (623)
|+|.|||..|...+..|...-+ .|.+||.... +....++-|. = .|..|..|++|.-+|++.+..+ .+..++.-
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiD-R--dp~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFD-R--HPGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEEC-S--CTTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEe-c--ChHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 7899999999999998887633 4667776431 2233456553 2 4689999999999999987653 57899999
Q ss_pred hhhhccccc
Q 006971 120 AEYLEMTED 128 (623)
Q Consensus 120 A~~LqMte~ 128 (623)
|+|+++++.
T Consensus 84 a~fy~i~~~ 92 (115)
T 3kvt_A 84 LEFWGLDSN 92 (115)
T ss_dssp HHHHTCCGG
T ss_pred HHHhCCChH
Confidence 999999984
No 33
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=93.87 E-value=0.05 Score=47.53 Aligned_cols=82 Identities=11% Similarity=0.063 Sum_probs=58.6
Q ss_pred EEEEECCEEEeeccccccccC-hHHHHhhcCC--CCCCCceEEeCCCCCCHHHHHHHHHHhcC-CCccCCch-hHhhHHH
Q 006971 44 VTVHVGGTSFSLHKFPLVSKC-GYIRKLVSVS--SEADLSVIEIPDVPGGAEAFELAAKFCYG-INFEINTE-NVAGLRC 118 (623)
Q Consensus 44 V~I~V~~~~F~lHK~vLas~S-~Yfr~lf~~~--~e~~~~~I~L~~~PGgae~Felv~~FcY~-~~i~It~~-NV~~L~c 118 (623)
|+|.|||..|...+..|...- ..+.+|+... -+....++-|. = .|+.|+.|++|.-+ |++.+..+ .+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiD-R--dp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFD-R--NRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEEC-S--CSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEEc-C--ChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 789999999999988886542 1334444321 11233456653 2 46899999999998 89876443 5788999
Q ss_pred hhhhhccccc
Q 006971 119 VAEYLEMTED 128 (623)
Q Consensus 119 AA~~LqMte~ 128 (623)
-|+|+++++.
T Consensus 80 Ea~fy~i~~~ 89 (100)
T 1t1d_A 80 EIKFYELGEN 89 (100)
T ss_dssp HHHHTTCCHH
T ss_pred HHHHcCCCHH
Confidence 9999999983
No 34
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=93.74 E-value=0.049 Score=49.42 Aligned_cols=81 Identities=11% Similarity=0.107 Sum_probs=58.4
Q ss_pred eeEEEEECCEEEeeccccccccChHHHHhhcCC-----CCCCCceEEeCCCCCCHHHHHHHHHHhcCCCccCCch-hHhh
Q 006971 42 SDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-----SEADLSVIEIPDVPGGAEAFELAAKFCYGINFEINTE-NVAG 115 (623)
Q Consensus 42 ~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~-----~e~~~~~I~L~~~PGgae~Felv~~FcY~~~i~It~~-NV~~ 115 (623)
.=|+|.|||..|..-+..|...-+- |+..+ ......++-|. -.|+.|+.|++|.-+|++.+..+ .+..
T Consensus 13 ~~V~LNVGG~~F~t~~~TL~~~p~S---~L~~~~~~~~~~~~~g~~FiD---Rdp~~F~~ILnflR~G~l~~p~~~~~~~ 86 (124)
T 1s1g_A 13 ELIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFFD---RDPEVFRCVLNFYRTGKLHYPRYECISA 86 (124)
T ss_dssp CEEEEEETTEEEEEEHHHHTTSTTS---STTSSGGGGTBCSSSCSEEEC---SCHHHHHHHHHHHHHSCBCCCTTSCHHH
T ss_pred CEEEEEeCCEEEEEeHHHHhcCCCc---eecccCCcccccCCCCcEEEc---CChHHHHHHHHHHhcCCCCCCCCcCHHH
Confidence 3478999999999988877654321 22221 11223355553 25899999999999999987543 5789
Q ss_pred HHHhhhhhccccc
Q 006971 116 LRCVAEYLEMTED 128 (623)
Q Consensus 116 L~cAA~~LqMte~ 128 (623)
|+.-|+|+++++.
T Consensus 87 l~~Ea~fy~i~~l 99 (124)
T 1s1g_A 87 YDDELAFYGILPE 99 (124)
T ss_dssp HHHHHHHTTCCGG
T ss_pred HHHHHHHcCCChH
Confidence 9999999999983
No 35
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=92.29 E-value=0.043 Score=48.23 Aligned_cols=85 Identities=12% Similarity=0.181 Sum_probs=60.4
Q ss_pred EEEEECCEEEeeccccccccChHHHHhhcCC-C----CCCCceEEeCCCCCCHHHHHHHHHHhcCCCccCCch-hHhhHH
Q 006971 44 VTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-S----EADLSVIEIPDVPGGAEAFELAAKFCYGINFEINTE-NVAGLR 117 (623)
Q Consensus 44 V~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~-~----e~~~~~I~L~~~PGgae~Felv~~FcY~~~i~It~~-NV~~L~ 117 (623)
|+|.|||..|...+..|...-+ .|+... + .....++-|.- .|+.|+.|++|.-+|++.+..+ .+..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~FiDR---dp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFFDR---DPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEECS---CTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEEeC---CcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 7899999999999887765432 123221 1 11234555532 4799999999999999887543 578999
Q ss_pred HhhhhhccccccccchHHHHHH
Q 006971 118 CVAEYLEMTEDYAVGNLVGRAE 139 (623)
Q Consensus 118 cAA~~LqMte~~~~~NL~~~ce 139 (623)
.-|+|+++++. +++.||
T Consensus 76 ~Ea~fy~i~~l-----~~~~cc 92 (105)
T 1nn7_A 76 EELAFFGLIPE-----IIGDCC 92 (105)
T ss_dssp HHHHHHTCCSC-----CBCHHH
T ss_pred HHHHHcCCCHH-----HHHHHH
Confidence 99999999984 345554
No 36
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=92.04 E-value=0.056 Score=50.07 Aligned_cols=82 Identities=11% Similarity=0.123 Sum_probs=59.3
Q ss_pred CeeEEEEECCEEEeeccccccccChHHHHhhcCC-C----CCCCceEEeCCCCCCHHHHHHHHHHhcCCCccCCch-hHh
Q 006971 41 PSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-S----EADLSVIEIPDVPGGAEAFELAAKFCYGINFEINTE-NVA 114 (623)
Q Consensus 41 ~~DV~I~V~~~~F~lHK~vLas~S~Yfr~lf~~~-~----e~~~~~I~L~~~PGgae~Felv~~FcY~~~i~It~~-NV~ 114 (623)
..=|+|.|||..|...+..|...-+ .|+... + .....++-|. -.++.|+.|++|.-+|++.+..+ .+.
T Consensus 34 ~~~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFiD---Rdp~~F~~ILnflR~G~l~~p~~~~~~ 107 (140)
T 2nz0_B 34 DELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFFD---RDPEVFRCVLNFYRTGKLHYPRYECIS 107 (140)
T ss_dssp CCEEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEEC---SCHHHHHHHHHHHHHSSBCCCTTSCHH
T ss_pred CCEEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEEe---CCcHHHHHHHHHHhcCCcCCCCCcCHH
Confidence 3458899999999998887765432 133221 1 1223455553 25899999999999999987543 578
Q ss_pred hHHHhhhhhccccc
Q 006971 115 GLRCVAEYLEMTED 128 (623)
Q Consensus 115 ~L~cAA~~LqMte~ 128 (623)
.++.-|+|+++++.
T Consensus 108 ~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 108 AYDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHHTCCGG
T ss_pred HHHHHHHHcCCChH
Confidence 99999999999983
No 37
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=68.48 E-value=1.3 Score=29.24 Aligned_cols=17 Identities=41% Similarity=0.438 Sum_probs=14.4
Q ss_pred hhHhhHHHhhhhhcccc
Q 006971 111 ENVAGLRCVAEYLEMTE 127 (623)
Q Consensus 111 ~NV~~L~cAA~~LqMte 127 (623)
.||+.|+.||+||+=-|
T Consensus 3 ~nvq~LLeAAeyLErrE 19 (26)
T 1pd7_B 3 MNIQMLLEAADYLERRE 19 (26)
T ss_dssp CSTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 59999999999998443
No 38
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=58.88 E-value=8.2 Score=42.51 Aligned_cols=84 Identities=8% Similarity=0.046 Sum_probs=57.3
Q ss_pred eeEEEEECCEEEeeccccccccCh-HHHHhhcCC--CCCCCceEEeCCCCCCHHHHHHHHHHhcC-CCccCCch-hHhhH
Q 006971 42 SDVTVHVGGTSFSLHKFPLVSKCG-YIRKLVSVS--SEADLSVIEIPDVPGGAEAFELAAKFCYG-INFEINTE-NVAGL 116 (623)
Q Consensus 42 ~DV~I~V~~~~F~lHK~vLas~S~-Yfr~lf~~~--~e~~~~~I~L~~~PGgae~Felv~~FcY~-~~i~It~~-NV~~L 116 (623)
-=|+|.|||..|...+.-|...-+ .+-+|+... -+....++-+. -.|+.|+.+++|..+ |++.+..+ .+..+
T Consensus 52 ~~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~D---R~~~~F~~IL~~~r~~g~l~~p~~~~~~~~ 128 (514)
T 2r9r_B 52 ERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFD---RNRPSFDAILYYYQSGGRLRRPVNVPLDIF 128 (514)
T ss_dssp CEEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEEC---SCHHHHHHHHHHHHHTSCCCCCTTSCHHHH
T ss_pred CEEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEEc---CChHHHHHHHHHHhcCCccccCCcccHHHH
Confidence 357889999999998877754321 111222211 12233456552 258999999999998 99886443 46778
Q ss_pred HHhhhhhccccc
Q 006971 117 RCVAEYLEMTED 128 (623)
Q Consensus 117 ~cAA~~LqMte~ 128 (623)
..-|+|.++.+.
T Consensus 129 ~~E~~f~~i~~~ 140 (514)
T 2r9r_B 129 SEEIRFYELGEE 140 (514)
T ss_dssp HHHHHHTTCCHH
T ss_pred HHHHHhcCCCHH
Confidence 999999999984
No 39
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=48.98 E-value=15 Score=28.24 Aligned_cols=29 Identities=21% Similarity=0.240 Sum_probs=22.5
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHHHHhhh
Q 006971 527 ELSSLRRENEDLKIELLKMKMKLKEIEKS 555 (623)
Q Consensus 527 ~~~~~~ren~~Lk~el~~m~~rv~eLek~ 555 (623)
++..+.+||++||..++.++.++.||.+.
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~ 48 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKAK 48 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888888888888888887764
No 40
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=44.83 E-value=14 Score=32.55 Aligned_cols=33 Identities=9% Similarity=0.022 Sum_probs=23.9
Q ss_pred hhcCCCCCChHHHHHHHHhcCCCccccchhHHHHHHHHHHhCCC
Q 006971 403 EIATDRNLSVAKFISLAELIPEQSRITEDGMYRAIDIYLKAHPT 446 (623)
Q Consensus 403 EiA~D~nL~~~kF~~Lae~lP~~aR~~~DgLYrAIDiYLk~Hp~ 446 (623)
|...|.+.+|.++...+ .++++|||-||-+||.
T Consensus 90 e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 90 EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 34556677777776554 6899999999999983
No 41
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.19 E-value=20 Score=30.52 Aligned_cols=37 Identities=14% Similarity=0.006 Sum_probs=33.1
Q ss_pred CCccCCchhHhhHHHhhhhhccccccccchHHHHHHHHHHHhh
Q 006971 104 INFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVA 146 (623)
Q Consensus 104 ~~i~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 146 (623)
+.=.|+++|...++..|+.++.++ |.++|..|+.+..
T Consensus 4 ~~~~L~~~NCl~i~~~A~~~~~~~------L~~~a~~fi~~nF 40 (105)
T 2eqx_A 4 GSSGVQVGNCLQVMWLADRHSDPE------LYTAAKHCAKTHL 40 (105)
T ss_dssp CCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC
T ss_pred hhccCCHHHHHHHHHHHHHcCCHH------HHHHHHHHHHHHH
Confidence 345689999999999999999999 9999999998875
No 42
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=36.44 E-value=15 Score=28.12 Aligned_cols=28 Identities=29% Similarity=0.433 Sum_probs=25.2
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhh
Q 006971 528 LSSLRRENEDLKIELLKMKMKLKEIEKS 555 (623)
Q Consensus 528 ~~~~~ren~~Lk~el~~m~~rv~eLek~ 555 (623)
+..++.||-.||.|++.=...++.||.|
T Consensus 12 Ve~Lk~ENshLrrEL~dNS~~lskLE~e 39 (54)
T 1deb_A 12 VEALKMENSNLRQELEDNSNHLTKLETE 39 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHhhHHHHHHHHhh
Confidence 3467899999999999999999999999
No 43
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=34.62 E-value=31 Score=26.52 Aligned_cols=24 Identities=38% Similarity=0.422 Sum_probs=21.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhh
Q 006971 532 RRENEDLKIELLKMKMKLKEIEKS 555 (623)
Q Consensus 532 ~ren~~Lk~el~~m~~rv~eLek~ 555 (623)
.-|.+.||.|++.+|.|+.+|.++
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~~ 41 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVEE 41 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999987
No 44
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=25.97 E-value=57 Score=27.21 Aligned_cols=43 Identities=16% Similarity=0.168 Sum_probs=32.9
Q ss_pred CcccchhHHHHHHHHHHccccCCCCcccCCCCCCCCCCchhHHHHHHHHHHHhhhh
Q 006971 349 DTLFDVDTVHRILMNYLDYQVDGNRLSFSGDNEYVSSPLSDMERVGKLMENYLAEI 404 (623)
Q Consensus 349 ~~lyDvd~V~ril~~Fl~~~~~~~~~~~~~~~~~~~~~~~~l~~VakLvD~YLaEi 404 (623)
+..++.+++.||+..+...+.. .-+..++.-||+++|-|..|.
T Consensus 6 ~~~~~~~lI~ril~~~f~~~kt-------------rI~~dAl~l~aeyl~iFV~EA 48 (81)
T 3b0b_C 6 EGGFRKETVERLLRLHFRDGRT-------------RVNGDALLLMAELLKVFVREA 48 (81)
T ss_dssp -CCCCHHHHHHHHHHHCCSTTC-------------EECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhccCcc-------------cccHHHHHHHHHHHHHHHHHH
Confidence 4568999999999987654321 224568999999999999884
No 45
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=23.66 E-value=47 Score=29.83 Aligned_cols=46 Identities=17% Similarity=0.164 Sum_probs=36.2
Q ss_pred HHHHHHHHHhcCCCccCCchhHhhHHHhhhhhccccccccchHHHHHHHHHHHhh
Q 006971 92 EAFELAAKFCYGINFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVA 146 (623)
Q Consensus 92 e~Felv~~FcY~~~i~It~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 146 (623)
+..+.+.+|+- -.++++|+..++..|+..+.++ |.+.|..|+.+++
T Consensus 119 ~l~~~c~~~l~---~~l~~~n~~~~~~~A~~~~~~~------L~~~~~~~i~~~~ 164 (172)
T 3htm_A 119 RLKVMCEDALC---SNLSVENAAEILILADLHSADQ------LKTQAVDFINYHA 164 (172)
T ss_dssp HHHHHHHHHHH---HTCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHH---HhCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 34444445543 2478899999999999999998 9999999998864
No 46
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=23.55 E-value=2.4e+02 Score=22.62 Aligned_cols=59 Identities=14% Similarity=0.169 Sum_probs=43.9
Q ss_pred CCCCCChHHHHHHHHhcCCCccccchhHHHHHHHHHHhCCC-CCHHHHhhhhcccc--cccCCHHH
Q 006971 406 TDRNLSVAKFISLAELIPEQSRITEDGMYRAIDIYLKAHPT-LSDMERKKVCSLMD--CQKLSREA 468 (623)
Q Consensus 406 ~D~nL~~~kF~~Lae~lP~~aR~~~DgLYrAIDiYLk~Hp~-lse~Er~~lC~~~d--c~KLS~ea 468 (623)
.|..+....|..+...- ....+.+.+|.+.|=+.+.+ |+..|=.++++.+. ..+++.+.
T Consensus 21 ~~g~i~~~eF~~~~~~~----~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~ 82 (109)
T 3fs7_A 21 AADSFNYKSFFSTVGLS----SKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAE 82 (109)
T ss_dssp STTCCCHHHHHHHHTCT----TCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHH
T ss_pred CCCcCcHHHHHHHHhcC----CCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHH
Confidence 68899999999887642 34566788888888666665 89999888888774 45666654
No 47
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=23.17 E-value=84 Score=23.13 Aligned_cols=28 Identities=21% Similarity=0.349 Sum_probs=24.4
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q 006971 529 SSLRRENEDLKIELLKMKMKLKEIEKSS 556 (623)
Q Consensus 529 ~~~~ren~~Lk~el~~m~~rv~eLek~~ 556 (623)
..+.||+..-+..+..+|.|+.+||+.+
T Consensus 12 ~kVdrEI~Kte~kI~~lqkKlkeLee~a 39 (42)
T 2l5g_B 12 DRVDREITMVEQQISKLKKKQQQLEEEA 39 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4578899999999999999999999873
No 48
>4dra_E Centromere protein X; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_J
Probab=20.65 E-value=61 Score=27.29 Aligned_cols=43 Identities=14% Similarity=0.183 Sum_probs=32.6
Q ss_pred CcccchhHHHHHHHHHHccccCCCCcccCCCCCCCCCCchhHHHHHHHHHHHhhhh
Q 006971 349 DTLFDVDTVHRILMNYLDYQVDGNRLSFSGDNEYVSSPLSDMERVGKLMENYLAEI 404 (623)
Q Consensus 349 ~~lyDvd~V~ril~~Fl~~~~~~~~~~~~~~~~~~~~~~~~l~~VakLvD~YLaEi 404 (623)
+.-+..++|.||+..+...+.. .-+..++..|++++|-|..|.
T Consensus 10 ~~~i~~~li~ril~~~F~~~kT-------------kIs~dAl~l~aeyl~iFV~EA 52 (84)
T 4dra_E 10 GSGFRKELVSRLLHLHFKDDKT-------------KVSGDALQLMVELLKVFVVEA 52 (84)
T ss_dssp -CCCCHHHHHHHHHTTCSSTTC-------------EECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-------------cccHHHHHHHHHHHHHHHHHH
Confidence 4578999999999977654321 234568999999999999884
Done!